Query 011924
Match_columns 475
No_of_seqs 590 out of 3612
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 18:06:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011924.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011924hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 8.8E-39 3E-43 307.9 41.6 265 188-457 31-315 (321)
2 1vyh_C Platelet-activating fac 100.0 1.2E-37 4.1E-42 310.4 39.8 270 134-457 112-405 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 1.1E-36 3.6E-41 295.7 43.1 272 134-457 59-337 (340)
4 4gqb_B Methylosome protein 50; 100.0 2.8E-37 9.5E-42 300.1 36.8 284 133-457 33-325 (344)
5 2pbi_B Guanine nucleotide-bind 100.0 7.3E-36 2.5E-40 291.5 41.7 279 128-457 61-351 (354)
6 1erj_A Transcriptional repress 100.0 9.5E-36 3.3E-40 294.9 42.5 291 129-457 62-383 (393)
7 2ynn_A Coatomer subunit beta'; 100.0 1.6E-35 5.3E-40 282.9 40.4 268 133-454 16-294 (304)
8 2ynn_A Coatomer subunit beta'; 100.0 8.8E-36 3E-40 284.6 36.3 233 190-457 14-253 (304)
9 1vyh_C Platelet-activating fac 100.0 1.1E-35 3.8E-40 296.2 37.3 234 188-457 107-363 (410)
10 3iz6_a 40S ribosomal protein R 100.0 4.5E-36 1.5E-40 295.9 29.0 279 129-457 64-369 (380)
11 4g56_B MGC81050 protein; prote 100.0 1.2E-35 4E-40 290.4 31.4 277 133-457 45-337 (357)
12 3frx_A Guanine nucleotide-bind 100.0 6.5E-34 2.2E-38 273.6 40.3 263 189-457 17-311 (319)
13 2xzm_R RACK1; ribosome, transl 100.0 7.3E-34 2.5E-38 276.0 39.3 262 190-457 22-334 (343)
14 2ymu_A WD-40 repeat protein; u 100.0 3.2E-33 1.1E-37 290.2 45.9 292 134-457 266-574 (577)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.8E-34 2.7E-38 276.1 38.4 277 133-457 19-329 (345)
16 1nr0_A Actin interacting prote 100.0 3.4E-34 1.2E-38 300.1 38.5 298 134-457 151-605 (611)
17 1r5m_A SIR4-interacting protei 100.0 1.6E-33 5.5E-38 280.0 41.4 311 132-457 47-419 (425)
18 1nr0_A Actin interacting prote 100.0 7.6E-34 2.6E-38 297.4 39.9 269 135-457 23-349 (611)
19 1got_B GT-beta; complex (GTP-b 100.0 1.1E-33 3.7E-38 274.5 36.9 231 190-457 56-295 (340)
20 4ery_A WD repeat-containing pr 100.0 1.2E-32 4.2E-37 263.4 42.3 271 133-457 26-306 (312)
21 3ow8_A WD repeat-containing pr 100.0 2.7E-33 9.3E-38 269.5 37.8 264 134-420 36-320 (321)
22 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.9E-34 3.4E-38 275.4 33.8 236 191-458 18-278 (345)
23 2hes_X YDR267CP; beta-propelle 100.0 4.9E-33 1.7E-37 268.8 37.6 267 144-457 26-322 (330)
24 3zwl_B Eukaryotic translation 100.0 6.3E-33 2.2E-37 270.4 38.1 261 189-457 32-340 (369)
25 2pm7_B Protein transport prote 100.0 2.1E-33 7.1E-38 267.2 33.3 237 188-457 8-279 (297)
26 2ymu_A WD-40 repeat protein; u 100.0 4.3E-32 1.5E-36 281.7 45.8 304 133-467 224-549 (577)
27 2hes_X YDR267CP; beta-propelle 100.0 4E-33 1.4E-37 269.4 35.3 236 189-457 14-274 (330)
28 4gqb_B Methylosome protein 50; 100.0 4.1E-33 1.4E-37 270.7 34.2 241 133-423 85-333 (344)
29 1gxr_A ESG1, transducin-like e 100.0 6.4E-32 2.2E-36 260.0 41.7 279 129-457 49-331 (337)
30 2pbi_B Guanine nucleotide-bind 100.0 2.1E-32 7.1E-37 267.1 36.9 232 190-457 65-309 (354)
31 4aow_A Guanine nucleotide-bind 100.0 1.9E-31 6.6E-36 257.4 42.9 268 189-463 38-336 (340)
32 4ery_A WD repeat-containing pr 100.0 6.6E-32 2.3E-36 258.3 36.4 233 189-457 23-262 (312)
33 3dm0_A Maltose-binding peripla 100.0 7E-32 2.4E-36 286.8 39.5 264 188-457 381-687 (694)
34 1sq9_A Antiviral protein SKI8; 100.0 7.3E-32 2.5E-36 266.4 36.0 271 136-457 22-389 (397)
35 4h5i_A Guanine nucleotide-exch 100.0 2.7E-32 9.3E-37 267.3 32.3 285 131-458 15-338 (365)
36 3bg1_A Protein SEC13 homolog; 100.0 3.6E-33 1.2E-37 268.1 25.4 237 188-457 12-287 (316)
37 3vl1_A 26S proteasome regulato 100.0 4.2E-32 1.4E-36 270.4 34.0 294 135-455 61-411 (420)
38 3k26_A Polycomb protein EED; W 100.0 1.6E-32 5.5E-37 267.4 29.4 263 145-457 38-360 (366)
39 3iz6_a 40S ribosomal protein R 100.0 5.9E-33 2E-37 273.6 26.6 233 190-457 67-323 (380)
40 3i2n_A WD repeat-containing pr 100.0 6.8E-32 2.3E-36 262.2 33.0 274 133-457 21-347 (357)
41 4gga_A P55CDC, cell division c 100.0 8.6E-31 2.9E-35 261.6 41.5 266 136-457 111-389 (420)
42 4g56_B MGC81050 protein; prote 100.0 2.1E-32 7.3E-37 267.3 28.9 243 133-425 97-347 (357)
43 1erj_A Transcriptional repress 100.0 1.7E-31 5.8E-36 264.4 35.0 233 190-457 65-335 (393)
44 4aez_A CDC20, WD repeat-contai 100.0 9.8E-31 3.3E-35 259.5 39.7 260 142-457 104-374 (401)
45 2pm9_A Protein WEB1, protein t 100.0 1.5E-32 5.1E-37 273.0 26.5 261 149-457 43-331 (416)
46 1k8k_C P40, ARP2/3 complex 41 100.0 4.7E-31 1.6E-35 257.9 35.6 274 133-457 11-355 (372)
47 2pm9_A Protein WEB1, protein t 100.0 1.5E-32 5E-37 273.0 25.2 278 132-457 69-408 (416)
48 3ei3_B DNA damage-binding prot 100.0 5.7E-31 2E-35 259.2 36.0 269 133-456 76-375 (383)
49 3dwl_C Actin-related protein 2 100.0 1.6E-33 5.5E-38 276.6 16.9 233 189-455 11-274 (377)
50 1gxr_A ESG1, transducin-like e 100.0 1.1E-30 3.8E-35 251.3 36.4 232 189-456 51-289 (337)
51 3f3f_A Nucleoporin SEH1; struc 100.0 4.8E-31 1.6E-35 254.3 33.1 250 188-471 10-344 (351)
52 3odt_A Protein DOA1; ubiquitin 100.0 4.1E-30 1.4E-34 244.8 39.0 263 134-457 22-290 (313)
53 3jrp_A Fusion protein of prote 100.0 1.4E-30 4.9E-35 254.8 35.6 237 188-457 10-281 (379)
54 1k8k_C P40, ARP2/3 complex 41 100.0 5.5E-31 1.9E-35 257.4 31.7 237 187-457 6-268 (372)
55 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-29 6.8E-34 253.5 43.7 286 138-456 125-431 (445)
56 3mmy_A MRNA export factor; mRN 100.0 1.2E-30 4.1E-35 254.1 33.2 265 188-458 38-341 (368)
57 1r5m_A SIR4-interacting protei 100.0 1.4E-30 4.9E-35 258.7 34.2 261 190-457 46-355 (425)
58 1yfq_A Cell cycle arrest prote 100.0 2.2E-30 7.6E-35 250.3 33.3 266 133-455 14-315 (342)
59 4a11_B DNA excision repair pro 100.0 5.1E-30 1.8E-34 253.4 35.2 239 188-457 42-359 (408)
60 3v7d_B Cell division control p 100.0 5.4E-29 1.8E-33 251.5 43.2 286 141-455 131-454 (464)
61 3dwl_C Actin-related protein 2 100.0 1.3E-31 4.4E-36 263.0 21.6 276 132-458 13-374 (377)
62 2j04_B YDR362CP, TAU91; beta p 100.0 2.8E-31 9.6E-36 271.2 24.4 242 190-466 208-519 (524)
63 4ggc_A P55CDC, cell division c 100.0 5.9E-29 2E-33 237.5 39.0 266 136-457 31-309 (318)
64 3gre_A Serine/threonine-protei 100.0 4.8E-30 1.6E-34 257.2 32.8 282 132-458 65-435 (437)
65 1sq9_A Antiviral protein SKI8; 100.0 1.2E-30 4.1E-35 257.7 27.9 235 188-456 15-315 (397)
66 3dw8_B Serine/threonine-protei 100.0 7.7E-30 2.6E-34 256.0 33.7 281 134-454 32-438 (447)
67 3frx_A Guanine nucleotide-bind 100.0 7.2E-30 2.5E-34 245.3 31.6 200 225-457 10-221 (319)
68 2j04_B YDR362CP, TAU91; beta p 100.0 4.6E-31 1.6E-35 269.6 24.1 226 198-457 172-422 (524)
69 3vl1_A 26S proteasome regulato 100.0 1.6E-30 5.4E-35 259.0 26.8 227 194-457 63-316 (420)
70 2oaj_A Protein SNI1; WD40 repe 100.0 7.6E-30 2.6E-34 277.5 34.0 300 133-457 61-599 (902)
71 1pgu_A Actin interacting prote 100.0 6.6E-29 2.3E-33 259.2 39.6 297 134-457 164-608 (615)
72 3sfz_A APAF-1, apoptotic pepti 100.0 2.2E-29 7.5E-34 284.4 38.7 301 133-457 660-1028(1249)
73 3mkq_A Coatomer beta'-subunit; 100.0 3.9E-29 1.3E-33 270.0 38.8 268 133-454 16-293 (814)
74 2xyi_A Probable histone-bindin 100.0 6.3E-30 2.1E-34 256.2 29.4 237 189-456 128-403 (430)
75 3v7d_B Cell division control p 100.0 4.7E-29 1.6E-33 251.9 35.6 226 191-457 124-375 (464)
76 4e54_B DNA damage-binding prot 100.0 2.6E-30 8.8E-35 259.4 26.0 228 190-451 120-363 (435)
77 1p22_A F-BOX/WD-repeat protein 100.0 3.3E-29 1.1E-33 251.2 33.5 253 141-457 142-408 (435)
78 4e54_B DNA damage-binding prot 100.0 7E-30 2.4E-34 256.2 28.5 271 134-456 123-423 (435)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 2.5E-29 8.5E-34 249.3 32.2 231 188-449 80-330 (402)
80 3ei3_B DNA damage-binding prot 100.0 2.3E-29 8E-34 247.7 31.5 230 190-456 74-332 (383)
81 3dw8_B Serine/threonine-protei 100.0 5E-30 1.7E-34 257.3 27.2 263 189-457 28-367 (447)
82 3mkq_A Coatomer beta'-subunit; 100.0 2.5E-29 8.6E-34 271.6 34.4 233 189-457 13-253 (814)
83 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2E-28 6.7E-33 246.7 38.6 278 133-447 7-369 (450)
84 3vu4_A KMHSV2; beta-propeller 100.0 4.1E-29 1.4E-33 243.8 31.7 262 188-460 18-333 (355)
85 4gq1_A NUP37; propeller, trans 100.0 6E-30 2.1E-34 253.2 24.4 224 198-454 100-381 (393)
86 3k26_A Polycomb protein EED; W 100.0 9.9E-30 3.4E-34 247.6 25.5 235 188-457 17-312 (366)
87 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-29 4.7E-34 245.8 26.2 257 148-463 55-333 (343)
88 1yfq_A Cell cycle arrest prote 100.0 2.3E-29 8E-34 243.1 27.5 233 188-456 10-275 (342)
89 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-28 5.8E-33 277.1 38.5 234 188-457 614-907 (1249)
90 3gre_A Serine/threonine-protei 100.0 1.2E-29 4.1E-34 254.2 26.0 244 190-457 64-353 (437)
91 3bg1_A Protein SEC13 homolog; 100.0 2.3E-29 7.8E-34 241.5 26.3 238 134-420 17-292 (316)
92 2pm7_B Protein transport prote 100.0 7.1E-29 2.4E-33 235.9 29.1 200 226-457 3-232 (297)
93 4aez_A CDC20, WD repeat-contai 100.0 2.4E-28 8.1E-33 242.3 33.4 229 191-457 95-330 (401)
94 1pgu_A Actin interacting prote 100.0 1E-27 3.5E-32 250.2 39.8 294 133-456 21-359 (615)
95 2aq5_A Coronin-1A; WD40 repeat 100.0 8.3E-29 2.8E-33 245.6 30.0 224 201-457 49-293 (402)
96 3jro_A Fusion protein of prote 100.0 2.3E-29 7.7E-34 269.6 27.5 237 188-457 8-279 (753)
97 3odt_A Protein DOA1; ubiquitin 100.0 4.2E-28 1.5E-32 230.9 33.2 224 189-456 18-248 (313)
98 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.4E-27 4.9E-32 239.9 38.4 251 190-457 120-385 (445)
99 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-28 5.1E-33 247.6 31.2 193 231-456 101-332 (450)
100 3zwl_B Eukaryotic translation 100.0 2.6E-27 8.8E-32 230.5 38.8 264 133-423 35-348 (369)
101 3i2n_A WD repeat-containing pr 100.0 6.1E-29 2.1E-33 241.3 27.2 234 188-457 17-285 (357)
102 4aow_A Guanine nucleotide-bind 100.0 3.7E-27 1.3E-31 227.2 37.9 270 129-423 36-339 (340)
103 2xzm_R RACK1; ribosome, transl 100.0 5.4E-28 1.8E-32 234.6 32.1 200 225-457 14-238 (343)
104 3lrv_A PRE-mRNA-splicing facto 100.0 4.1E-29 1.4E-33 242.5 23.3 222 198-462 47-290 (343)
105 1p22_A F-BOX/WD-repeat protein 100.0 1.6E-27 5.5E-32 238.9 34.2 222 190-457 134-359 (435)
106 2oaj_A Protein SNI1; WD40 repe 100.0 9.9E-28 3.4E-32 260.9 32.2 226 190-454 18-298 (902)
107 3f3f_A Nucleoporin SEH1; struc 100.0 4.6E-27 1.6E-31 226.3 33.1 259 133-428 14-344 (351)
108 3jrp_A Fusion protein of prote 100.0 1.7E-27 5.6E-32 233.0 30.0 240 133-421 14-287 (379)
109 3bws_A Protein LP49; two-domai 100.0 2.1E-26 7.3E-31 230.1 38.4 273 132-456 124-425 (433)
110 4h5i_A Guanine nucleotide-exch 100.0 3.8E-27 1.3E-31 230.8 31.2 194 191-422 135-344 (365)
111 2j04_A TAU60, YPL007P, hypothe 100.0 8.2E-28 2.8E-32 240.9 25.0 224 191-455 17-290 (588)
112 3dm0_A Maltose-binding peripla 100.0 4.7E-27 1.6E-31 249.6 31.4 199 226-457 376-586 (694)
113 2w18_A PALB2, fancn, partner a 100.0 6.5E-27 2.2E-31 220.7 28.6 239 144-419 56-355 (356)
114 4a11_B DNA excision repair pro 100.0 2E-26 6.9E-31 227.5 33.7 256 134-429 47-373 (408)
115 4gga_A P55CDC, cell division c 100.0 3.2E-26 1.1E-30 228.5 35.2 253 134-440 151-414 (420)
116 1l0q_A Surface layer protein; 100.0 1.3E-25 4.4E-30 221.3 38.2 250 149-456 10-268 (391)
117 2w18_A PALB2, fancn, partner a 100.0 3.3E-26 1.1E-30 216.0 29.7 248 191-458 41-352 (356)
118 2xyi_A Probable histone-bindin 100.0 5E-26 1.7E-30 227.8 30.4 258 126-422 123-411 (430)
119 2j04_A TAU60, YPL007P, hypothe 100.0 1E-25 3.5E-30 225.8 30.6 218 189-452 85-350 (588)
120 3mmy_A MRNA export factor; mRN 99.9 7E-26 2.4E-30 220.3 28.2 264 134-419 43-344 (368)
121 4ggc_A P55CDC, cell division c 99.9 2.6E-24 9E-29 205.2 32.9 235 134-422 71-316 (318)
122 1l0q_A Surface layer protein; 99.9 3.5E-23 1.2E-27 203.8 39.5 249 129-434 30-288 (391)
123 3vu4_A KMHSV2; beta-propeller 99.9 1.4E-24 4.9E-29 211.6 28.1 219 227-457 14-265 (355)
124 4gq1_A NUP37; propeller, trans 99.9 3.2E-25 1.1E-29 219.2 23.4 244 148-420 108-388 (393)
125 3jro_A Fusion protein of prote 99.9 4E-25 1.4E-29 236.6 25.9 200 226-457 3-232 (753)
126 3bws_A Protein LP49; two-domai 99.9 2.7E-23 9.3E-28 207.5 33.4 226 192-453 125-365 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.9E-23 1E-27 206.6 32.2 223 199-462 143-383 (415)
128 1nir_A Nitrite reductase; hemo 99.9 6.4E-22 2.2E-26 203.3 38.4 278 149-452 157-498 (543)
129 2ojh_A Uncharacterized protein 99.9 8.5E-23 2.9E-27 191.9 29.2 250 150-455 21-294 (297)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.7E-22 1.3E-26 198.7 34.3 236 151-445 159-410 (415)
131 3vgz_A Uncharacterized protein 99.9 2.2E-21 7.6E-26 187.8 37.6 269 133-455 43-336 (353)
132 3u4y_A Uncharacterized protein 99.9 1.4E-20 4.6E-25 180.9 36.3 266 136-456 3-296 (331)
133 1ri6_A Putative isomerase YBHE 99.9 7.7E-21 2.6E-25 183.0 33.2 232 191-456 39-301 (343)
134 2ecf_A Dipeptidyl peptidase IV 99.9 8.1E-21 2.8E-25 203.0 35.1 311 133-455 39-447 (741)
135 1nir_A Nitrite reductase; hemo 99.9 1.5E-20 5.1E-25 193.1 32.7 245 196-451 146-439 (543)
136 2ecf_A Dipeptidyl peptidase IV 99.9 7E-21 2.4E-25 203.5 30.1 256 189-454 36-401 (741)
137 1pby_B Quinohemoprotein amine 99.9 2.8E-20 9.5E-25 178.6 29.7 217 200-456 2-303 (337)
138 2z3z_A Dipeptidyl aminopeptida 99.9 2.7E-20 9.3E-25 197.8 31.6 266 132-455 83-423 (706)
139 2oit_A Nucleoporin 214KDA; NH2 99.9 8.5E-21 2.9E-25 189.7 23.9 235 193-461 42-330 (434)
140 2ojh_A Uncharacterized protein 99.9 3E-20 1E-24 174.4 25.7 212 204-454 17-238 (297)
141 3hfq_A Uncharacterized protein 99.9 2.9E-19 9.8E-24 173.0 32.7 230 193-455 43-308 (347)
142 3o4h_A Acylamino-acid-releasin 99.9 1.7E-20 5.7E-25 195.0 25.2 258 189-463 21-312 (582)
143 3vgz_A Uncharacterized protein 99.9 4.1E-19 1.4E-23 171.8 32.5 224 191-452 42-291 (353)
144 1xfd_A DIP, dipeptidyl aminope 99.9 1.8E-20 6.3E-25 199.6 25.0 290 133-454 19-381 (723)
145 3u4y_A Uncharacterized protein 99.9 2.5E-19 8.6E-24 172.0 29.9 218 198-452 9-240 (331)
146 2z3z_A Dipeptidyl aminopeptida 99.9 1E-19 3.4E-24 193.5 28.8 287 135-455 30-378 (706)
147 2oit_A Nucleoporin 214KDA; NH2 99.9 7.4E-21 2.5E-25 190.2 17.6 189 233-456 37-265 (434)
148 1ri6_A Putative isomerase YBHE 99.9 1E-18 3.6E-23 168.0 31.9 264 132-445 39-335 (343)
149 1k32_A Tricorn protease; prote 99.9 5E-19 1.7E-23 196.2 33.1 223 192-456 249-495 (1045)
150 1jmx_B Amine dehydrogenase; ox 99.8 4.4E-19 1.5E-23 171.2 27.9 216 198-454 10-316 (349)
151 1xfd_A DIP, dipeptidyl aminope 99.8 4E-20 1.4E-24 197.0 20.5 220 192-450 19-323 (723)
152 3scy_A Hypothetical bacterial 99.8 4.8E-18 1.6E-22 165.4 32.4 261 133-441 52-360 (361)
153 1k32_A Tricorn protease; prote 99.8 1.7E-18 6E-23 191.9 32.6 263 132-453 297-628 (1045)
154 3scy_A Hypothetical bacterial 99.8 1.1E-17 3.8E-22 162.8 33.9 235 194-454 54-327 (361)
155 1pby_B Quinohemoprotein amine 99.8 1.4E-17 4.8E-22 159.6 31.6 260 148-432 8-321 (337)
156 3hfq_A Uncharacterized protein 99.8 6.9E-17 2.4E-21 156.2 33.9 245 132-425 41-323 (347)
157 3pe7_A Oligogalacturonate lyas 99.8 1.7E-17 5.9E-22 162.8 26.4 275 134-461 39-379 (388)
158 1jmx_B Amine dehydrogenase; ox 99.8 5.5E-17 1.9E-21 156.4 29.1 225 149-431 19-335 (349)
159 1z68_A Fibroblast activation p 99.8 3E-19 1E-23 190.2 14.0 219 194-450 20-329 (719)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.1E-16 3.6E-21 156.4 30.1 229 192-454 42-331 (365)
161 1z68_A Fibroblast activation p 99.8 3.3E-17 1.1E-21 174.4 25.5 294 134-453 19-430 (719)
162 4a5s_A Dipeptidyl peptidase 4 99.8 2.9E-17 1E-21 175.5 22.8 233 192-462 19-349 (740)
163 3o4h_A Acylamino-acid-releasin 99.8 8.9E-18 3E-22 174.4 18.3 215 232-456 21-269 (582)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 1E-15 3.5E-20 149.4 30.1 221 201-454 4-276 (365)
165 2oiz_A Aromatic amine dehydrog 99.8 2.6E-15 9E-20 146.2 32.8 270 150-445 30-360 (361)
166 3c5m_A Oligogalacturonate lyas 99.7 5.6E-16 1.9E-20 152.1 24.4 275 134-462 39-380 (396)
167 3fvz_A Peptidyl-glycine alpha- 99.7 3.8E-15 1.3E-19 143.1 28.5 231 190-457 24-316 (329)
168 1q7f_A NHL, brain tumor CG1071 99.7 2E-14 6.7E-19 134.9 31.8 227 191-456 31-273 (286)
169 4a5s_A Dipeptidyl peptidase 4 99.7 1.1E-14 3.9E-19 155.4 33.0 298 133-455 19-438 (740)
170 3azo_A Aminopeptidase; POP fam 99.7 1.5E-15 5E-20 160.1 25.0 229 190-452 24-313 (662)
171 3e5z_A Putative gluconolactona 99.7 2.3E-14 7.8E-19 135.3 29.5 225 192-454 30-278 (296)
172 2gop_A Trilobed protease; beta 99.7 4.8E-14 1.6E-18 135.9 29.8 220 192-462 61-329 (347)
173 2gop_A Trilobed protease; beta 99.7 3.1E-14 1.1E-18 137.3 27.0 214 191-456 16-285 (347)
174 2dg1_A DRP35, lactonase; beta 99.7 2.7E-13 9.1E-18 130.0 33.4 234 192-463 47-313 (333)
175 3azo_A Aminopeptidase; POP fam 99.7 3.8E-14 1.3E-18 149.3 29.2 214 197-449 88-351 (662)
176 2oiz_A Aromatic amine dehydrog 99.7 1.1E-13 3.9E-18 134.6 29.4 236 207-452 29-324 (361)
177 3pe7_A Oligogalacturonate lyas 99.7 6.7E-15 2.3E-19 144.2 20.8 220 196-452 44-309 (388)
178 2xdw_A Prolyl endopeptidase; a 99.6 5.1E-13 1.7E-17 142.0 34.9 225 191-452 126-399 (710)
179 1qks_A Cytochrome CD1 nitrite 99.6 1E-11 3.5E-16 127.4 42.8 279 149-453 175-523 (567)
180 3no2_A Uncharacterized protein 99.6 2.6E-13 9E-18 126.7 28.0 213 198-451 4-231 (276)
181 1rwi_B Serine/threonine-protei 99.6 1.5E-13 5.3E-18 127.4 25.2 228 191-456 25-257 (270)
182 1q7f_A NHL, brain tumor CG1071 99.6 2.5E-12 8.6E-17 120.4 33.7 234 135-422 34-281 (286)
183 3fvz_A Peptidyl-glycine alpha- 99.6 4.9E-13 1.7E-17 128.3 29.1 220 152-420 70-321 (329)
184 3dsm_A Uncharacterized protein 99.6 7.9E-13 2.7E-17 126.8 27.8 249 150-451 16-285 (328)
185 2xdw_A Prolyl endopeptidase; a 99.6 1E-12 3.5E-17 139.6 29.2 193 231-455 123-358 (710)
186 3c5m_A Oligogalacturonate lyas 99.6 5.4E-14 1.8E-18 137.9 16.7 234 198-452 46-302 (396)
187 2z2n_A Virginiamycin B lyase; 99.5 8.2E-11 2.8E-15 110.3 36.7 257 134-450 18-283 (299)
188 3e5z_A Putative gluconolactona 99.5 1.4E-11 4.8E-16 116.0 30.2 231 134-423 31-288 (296)
189 3g4e_A Regucalcin; six bladed 99.5 1.6E-11 5.4E-16 115.9 29.8 217 198-454 24-263 (297)
190 3dsm_A Uncharacterized protein 99.5 1.5E-11 5.3E-16 117.8 29.7 242 142-440 53-319 (328)
191 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.3E-11 4.6E-16 116.8 29.0 233 193-463 21-296 (314)
192 2bkl_A Prolyl endopeptidase; m 99.5 5.8E-12 2E-16 133.4 28.8 225 190-452 121-382 (695)
193 2dg1_A DRP35, lactonase; beta 99.5 3.1E-12 1.1E-16 122.5 23.7 223 192-454 8-254 (333)
194 1qks_A Cytochrome CD1 nitrite 99.5 5.7E-11 1.9E-15 121.9 33.9 217 198-451 166-407 (567)
195 1rwi_B Serine/threonine-protei 99.5 1.2E-11 4E-16 114.6 25.0 235 133-423 26-266 (270)
196 2z2n_A Virginiamycin B lyase; 99.5 1.1E-10 3.9E-15 109.3 31.9 218 191-449 16-241 (299)
197 1xip_A Nucleoporin NUP159; bet 99.5 1.4E-12 4.9E-17 126.5 19.0 171 234-450 39-231 (388)
198 2bkl_A Prolyl endopeptidase; m 99.5 7.5E-12 2.5E-16 132.6 24.9 225 197-456 77-342 (695)
199 3hrp_A Uncharacterized protein 99.5 4.8E-11 1.6E-15 117.9 29.0 226 191-457 132-404 (409)
200 3no2_A Uncharacterized protein 99.5 7.5E-12 2.6E-16 116.8 21.8 170 249-454 7-186 (276)
201 2mad_H Methylamine dehydrogena 99.4 6E-10 2E-14 108.5 34.6 245 198-452 31-338 (373)
202 1yr2_A Prolyl oligopeptidase; 99.4 2.7E-11 9.4E-16 129.2 26.5 229 194-456 113-386 (741)
203 2mad_H Methylamine dehydrogena 99.4 1.4E-09 4.9E-14 105.9 36.4 266 140-429 30-358 (373)
204 2qc5_A Streptogramin B lactona 99.4 1.4E-09 4.9E-14 101.7 35.3 258 135-452 24-290 (300)
205 1yr2_A Prolyl oligopeptidase; 99.4 2.1E-10 7E-15 122.4 32.6 223 191-452 164-426 (741)
206 2ghs_A AGR_C_1268P; regucalcin 99.4 5E-10 1.7E-14 107.1 31.2 213 199-454 61-293 (326)
207 2qc5_A Streptogramin B lactona 99.4 8.7E-10 3E-14 103.2 31.7 219 191-450 21-247 (300)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 4.9E-10 1.7E-14 105.9 30.2 236 133-421 20-299 (314)
209 3sjl_D Methylamine dehydrogena 99.4 8.1E-10 2.8E-14 106.7 29.6 277 139-443 41-384 (386)
210 3sjl_D Methylamine dehydrogena 99.4 5.4E-10 1.9E-14 108.0 28.2 246 198-452 43-351 (386)
211 3dr2_A Exported gluconolactona 99.4 3.3E-10 1.1E-14 107.2 26.4 220 194-453 49-297 (305)
212 1xip_A Nucleoporin NUP159; bet 99.3 2.2E-11 7.4E-16 118.2 17.0 171 191-407 39-230 (388)
213 3c75_H MADH, methylamine dehyd 99.3 6.6E-10 2.2E-14 109.2 27.6 276 141-443 83-423 (426)
214 3g4e_A Regucalcin; six bladed 99.3 4.2E-09 1.4E-13 99.2 32.0 221 135-410 17-261 (297)
215 3c75_H MADH, methylamine dehyd 99.3 4.5E-10 1.5E-14 110.4 25.3 247 198-452 83-390 (426)
216 2qe8_A Uncharacterized protein 99.3 5.1E-10 1.8E-14 107.8 24.8 229 191-453 18-311 (343)
217 2ghs_A AGR_C_1268P; regucalcin 99.3 2.3E-08 7.8E-13 95.5 33.3 220 134-411 52-292 (326)
218 2ece_A 462AA long hypothetical 99.2 5.1E-09 1.8E-13 101.9 26.8 223 198-451 94-399 (462)
219 3iuj_A Prolyl endopeptidase; h 99.2 2.5E-09 8.6E-14 113.0 25.2 193 232-459 128-352 (693)
220 2hz6_A Endoplasmic reticulum t 99.2 1.4E-11 4.8E-16 120.1 6.4 204 197-445 7-216 (369)
221 3iuj_A Prolyl endopeptidase; h 99.2 4.3E-09 1.5E-13 111.3 25.4 222 191-453 130-391 (693)
222 2iwa_A Glutamine cyclotransfer 99.2 2.7E-08 9.3E-13 91.1 25.9 184 234-453 22-226 (266)
223 3dr2_A Exported gluconolactona 99.1 1.6E-08 5.6E-13 95.4 25.3 225 134-418 48-303 (305)
224 3hrp_A Uncharacterized protein 99.1 5.2E-08 1.8E-12 96.1 29.7 229 136-419 136-408 (409)
225 1npe_A Nidogen, entactin; glyc 99.1 8.9E-07 3E-11 81.6 35.5 216 191-445 37-263 (267)
226 3nol_A Glutamine cyclotransfer 99.1 4.9E-08 1.7E-12 88.3 24.6 184 231-452 41-244 (262)
227 1fwx_A Nitrous oxide reductase 99.1 9.7E-09 3.3E-13 103.4 21.2 250 193-451 90-406 (595)
228 1mda_H Methylamine dehydrogena 99.1 3.3E-08 1.1E-12 95.4 24.1 231 201-442 34-366 (368)
229 2ece_A 462AA long hypothetical 99.1 3.1E-08 1.1E-12 96.5 23.4 180 244-454 93-342 (462)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.7E-06 5.7E-11 84.0 35.8 290 142-456 53-371 (376)
231 3mbr_X Glutamine cyclotransfer 99.0 2.6E-07 8.8E-12 82.9 27.1 185 230-452 18-223 (243)
232 1fwx_A Nitrous oxide reductase 99.0 2.7E-08 9.2E-13 100.3 22.7 175 245-451 100-348 (595)
233 1yiq_A Quinohemoprotein alcoho 99.0 2.9E-07 9.9E-12 96.9 31.8 270 142-449 121-534 (689)
234 3nok_A Glutaminyl cyclase; bet 99.0 7E-08 2.4E-12 87.3 23.2 183 231-451 53-253 (268)
235 1kb0_A Quinohemoprotein alcoho 99.0 1.6E-07 5.4E-12 98.7 29.7 273 142-450 128-537 (677)
236 3hxj_A Pyrrolo-quinoline quino 99.0 6.5E-08 2.2E-12 91.9 23.6 211 199-457 107-318 (330)
237 1yiq_A Quinohemoprotein alcoho 99.0 2.3E-07 7.8E-12 97.7 28.9 252 198-456 69-498 (689)
238 1kb0_A Quinohemoprotein alcoho 99.0 1.2E-07 4.1E-12 99.6 26.6 298 142-455 77-499 (677)
239 2hz6_A Endoplasmic reticulum t 98.9 1.6E-10 5.3E-15 112.7 0.4 172 245-455 8-184 (369)
240 1mda_H Methylamine dehydrogena 98.9 6.5E-08 2.2E-12 93.4 18.5 101 247-377 32-157 (368)
241 2iwa_A Glutamine cyclotransfer 98.9 9.4E-07 3.2E-11 80.8 24.6 192 192-421 23-237 (266)
242 2qe8_A Uncharacterized protein 98.9 1.7E-07 5.7E-12 90.1 19.7 222 190-418 67-318 (343)
243 3q7m_A Lipoprotein YFGL, BAMB; 98.8 4.8E-06 1.7E-10 80.7 30.1 243 198-454 52-328 (376)
244 1npe_A Nidogen, entactin; glyc 98.8 1.3E-05 4.5E-10 73.6 31.0 217 200-453 2-227 (267)
245 3nol_A Glutamine cyclotransfer 98.8 2.2E-06 7.4E-11 77.6 23.1 180 192-410 45-244 (262)
246 2p4o_A Hypothetical protein; p 98.8 8.9E-06 3E-10 76.5 28.6 222 192-454 34-279 (306)
247 3hxj_A Pyrrolo-quinoline quino 98.7 6.1E-07 2.1E-11 85.0 19.4 213 191-454 61-275 (330)
248 3v65_B Low-density lipoprotein 98.7 3.6E-05 1.2E-09 74.9 32.3 252 134-440 79-337 (386)
249 3v64_C Agrin; beta propeller, 98.7 9E-05 3.1E-09 71.1 34.5 251 134-440 36-294 (349)
250 3qqz_A Putative uncharacterize 98.7 1.8E-05 6.1E-10 71.9 27.3 192 227-452 21-242 (255)
251 3nok_A Glutaminyl cyclase; bet 98.7 1.7E-06 5.8E-11 78.3 20.2 178 192-409 57-253 (268)
252 2ad6_A Methanol dehydrogenase 98.7 5.9E-05 2E-09 77.4 33.3 252 196-454 112-527 (571)
253 1flg_A Protein (quinoprotein e 98.7 0.00018 6.2E-09 73.9 36.0 296 142-448 68-544 (582)
254 3mbr_X Glutamine cyclotransfer 98.7 1.7E-05 5.9E-10 71.0 24.6 181 191-410 22-223 (243)
255 1kv9_A Type II quinohemoprotei 98.6 4.6E-05 1.6E-09 79.9 31.8 272 142-450 117-519 (668)
256 2fp8_A Strictosidine synthase; 98.6 2E-05 6.9E-10 74.6 26.2 220 194-453 23-302 (322)
257 1kv9_A Type II quinohemoprotei 98.6 8.2E-06 2.8E-10 85.5 25.3 294 142-455 66-480 (668)
258 4a2l_A BT_4663, two-component 98.6 0.00017 5.9E-09 77.2 34.6 221 188-449 308-559 (795)
259 1ijq_A LDL receptor, low-densi 98.6 0.00054 1.8E-08 64.6 35.1 230 145-430 4-247 (316)
260 2xe4_A Oligopeptidase B; hydro 98.5 7.3E-06 2.5E-10 87.2 22.4 185 234-453 175-387 (751)
261 3sov_A LRP-6, low-density lipo 98.5 0.00037 1.3E-08 65.8 31.8 204 191-430 36-247 (318)
262 3p5b_L Low density lipoprotein 98.5 0.0015 5E-08 63.8 36.5 246 142-440 83-339 (400)
263 4a2l_A BT_4663, two-component 98.5 0.00061 2.1E-08 72.9 34.9 219 189-450 262-515 (795)
264 2fp8_A Strictosidine synthase; 98.5 0.00034 1.2E-08 66.0 29.4 195 191-421 81-313 (322)
265 2ad6_A Methanol dehydrogenase 98.4 0.00012 4E-09 75.2 27.8 250 198-455 61-486 (571)
266 3v64_C Agrin; beta propeller, 98.4 0.00033 1.1E-08 67.1 29.2 214 200-453 45-264 (349)
267 1w6s_A Methanol dehydrogenase 98.4 0.00049 1.7E-08 70.7 32.0 239 202-447 124-530 (599)
268 1k3i_A Galactose oxidase precu 98.4 2.2E-05 7.5E-10 82.2 22.3 251 198-452 197-530 (656)
269 3tc9_A Hypothetical hydrolase; 98.4 0.00036 1.2E-08 68.8 28.6 223 193-453 140-419 (430)
270 3v65_B Low-density lipoprotein 98.4 0.00049 1.7E-08 66.9 29.2 215 200-453 88-307 (386)
271 1ijq_A LDL receptor, low-densi 98.3 0.0022 7.5E-08 60.4 31.8 211 202-453 4-227 (316)
272 3qqz_A Putative uncharacterize 98.3 0.00072 2.4E-08 61.3 26.5 198 191-419 28-251 (255)
273 3p5b_L Low density lipoprotein 98.3 0.002 6.9E-08 62.8 31.6 214 201-453 85-309 (400)
274 3m0c_C LDL receptor, low-densi 98.3 0.0029 9.9E-08 67.1 34.4 207 191-430 425-641 (791)
275 3v9f_A Two-component system se 98.3 0.0025 8.6E-08 68.0 34.4 223 187-449 310-555 (781)
276 3v9f_A Two-component system se 98.3 0.0013 4.4E-08 70.2 32.0 263 139-452 218-513 (781)
277 3sov_A LRP-6, low-density lipo 98.3 0.0014 4.7E-08 61.8 28.3 207 208-451 12-225 (318)
278 4hw6_A Hypothetical protein, I 98.2 0.00059 2E-08 67.4 26.0 222 193-452 142-421 (433)
279 3amr_A 3-phytase; beta-propell 98.2 0.00066 2.3E-08 64.0 24.2 190 249-473 42-270 (355)
280 2p4o_A Hypothetical protein; p 98.1 0.00054 1.9E-08 64.1 22.9 180 234-451 33-229 (306)
281 2xe4_A Oligopeptidase B; hydro 98.1 0.00035 1.2E-08 74.2 23.2 187 194-419 180-398 (751)
282 3tc9_A Hypothetical hydrolase; 98.1 0.00029 9.9E-09 69.6 20.8 142 310-453 141-290 (430)
283 1w6s_A Methanol dehydrogenase 98.1 0.00052 1.8E-08 70.5 23.1 198 198-429 61-350 (599)
284 3m0c_C LDL receptor, low-densi 98.1 0.0048 1.6E-07 65.4 30.4 214 201-453 397-621 (791)
285 4a0p_A LRP6, LRP-6, low-densit 98.0 0.017 5.9E-07 59.7 33.8 230 144-428 8-244 (628)
286 3kya_A Putative phosphatase; s 98.0 0.0048 1.6E-07 61.4 27.6 141 310-452 251-463 (496)
287 4a0p_A LRP6, LRP-6, low-densit 98.0 0.012 4.2E-07 60.8 30.4 213 201-452 8-225 (628)
288 4hw6_A Hypothetical protein, I 97.9 0.00099 3.4E-08 65.7 20.9 152 235-420 141-303 (433)
289 3amr_A 3-phytase; beta-propell 97.9 0.008 2.7E-07 56.6 24.4 200 200-429 41-272 (355)
290 1flg_A Protein (quinoprotein e 97.8 0.0012 4.1E-08 67.7 20.5 190 209-409 291-548 (582)
291 2p9w_A MAL S 1 allergenic prot 97.8 0.0017 6E-08 60.6 19.5 154 235-422 15-216 (334)
292 1n7d_A LDL receptor, low-densi 97.8 9E-05 3.1E-09 77.9 12.0 211 193-441 409-634 (699)
293 2ism_A Putative oxidoreductase 97.8 0.0066 2.3E-07 58.0 23.8 224 193-450 34-332 (352)
294 3sre_A PON1, serum paraoxonase 97.8 0.0089 3.1E-07 56.9 24.2 190 207-429 81-308 (355)
295 2xbg_A YCF48-like protein; pho 97.8 0.027 9.4E-07 53.0 30.7 224 190-455 80-314 (327)
296 1k3i_A Galactose oxidase precu 97.8 0.0079 2.7E-07 62.7 25.4 206 198-410 253-530 (656)
297 3s94_A LRP-6, low-density lipo 97.7 0.025 8.4E-07 58.4 28.5 201 192-427 42-249 (619)
298 2xzh_A Clathrin heavy chain 1; 97.7 0.019 6.5E-07 53.2 23.2 203 140-378 115-332 (365)
299 3a9g_A Putative uncharacterize 97.7 0.029 9.8E-07 53.6 26.0 140 310-452 139-330 (354)
300 2p9w_A MAL S 1 allergenic prot 97.7 0.032 1.1E-06 52.1 25.0 193 194-419 17-263 (334)
301 3s94_A LRP-6, low-density lipo 97.7 0.019 6.4E-07 59.3 26.0 210 207-452 16-231 (619)
302 1bpo_A Protein (clathrin); cla 97.7 0.026 8.7E-07 54.5 24.5 203 140-378 114-331 (494)
303 3pbp_A Nucleoporin NUP82; beta 97.6 0.0048 1.6E-07 59.4 18.8 142 243-417 29-208 (452)
304 3sre_A PON1, serum paraoxonase 97.6 0.036 1.2E-06 52.7 25.0 140 310-453 116-287 (355)
305 2xbg_A YCF48-like protein; pho 97.6 0.053 1.8E-06 51.0 28.2 136 310-450 126-267 (327)
306 3kya_A Putative phosphatase; s 97.6 0.011 3.9E-07 58.6 21.8 152 235-419 141-339 (496)
307 1n7d_A LDL receptor, low-densi 97.5 0.00036 1.2E-08 73.4 10.2 206 208-453 385-603 (699)
308 3s25_A Hypothetical 7-bladed b 97.4 0.078 2.7E-06 49.2 27.1 237 138-453 21-282 (302)
309 2vpj_A Kelch-like protein 12; 97.4 0.011 3.9E-07 54.7 18.1 217 197-455 13-265 (301)
310 2xzh_A Clathrin heavy chain 1; 97.2 0.13 4.4E-06 47.8 32.1 218 207-435 47-304 (365)
311 2xn4_A Kelch-like protein 2; s 97.2 0.02 6.9E-07 53.0 18.0 219 197-455 14-263 (302)
312 2xn4_A Kelch-like protein 2; s 97.2 0.075 2.6E-06 49.1 22.0 189 196-424 59-279 (302)
313 2g8s_A Glucose/sorbosone dehyd 97.1 0.18 6.3E-06 47.9 27.7 149 310-462 134-350 (353)
314 4asc_A Kelch repeat and BTB do 97.1 0.075 2.6E-06 49.5 21.4 212 201-454 7-254 (315)
315 2vpj_A Kelch-like protein 12; 97.1 0.043 1.5E-06 50.7 19.6 190 195-423 59-280 (301)
316 3ii7_A Kelch-like protein 7; p 97.1 0.048 1.6E-06 50.5 19.9 214 199-454 12-258 (306)
317 2ism_A Putative oxidoreductase 97.1 0.013 4.3E-07 56.0 15.7 138 310-451 35-220 (352)
318 3sbq_A Nitrous-oxide reductase 97.1 0.22 7.7E-06 49.5 24.2 102 348-450 323-452 (638)
319 1tl2_A L10, protein (tachylect 97.1 0.032 1.1E-06 48.7 16.1 134 310-450 45-199 (236)
320 3pbp_A Nucleoporin NUP82; beta 97.1 0.044 1.5E-06 52.8 18.5 135 315-451 30-198 (452)
321 3a9g_A Putative uncharacterize 97.0 0.02 6.7E-07 54.7 16.4 140 310-452 33-216 (354)
322 1cru_A Protein (soluble quinop 97.0 0.054 1.8E-06 53.5 19.4 100 310-409 31-162 (454)
323 4asc_A Kelch repeat and BTB do 97.0 0.11 3.6E-06 48.4 20.8 106 315-425 147-281 (315)
324 1bpo_A Protein (clathrin); cla 96.9 0.32 1.1E-05 47.0 33.0 218 207-435 46-303 (494)
325 1zgk_A Kelch-like ECH-associat 96.9 0.021 7E-07 53.2 14.8 218 194-454 20-273 (308)
326 3ii7_A Kelch-like protein 7; p 96.9 0.13 4.4E-06 47.5 20.3 190 195-424 52-275 (306)
327 3das_A Putative oxidoreductase 96.9 0.059 2E-06 51.0 17.7 159 310-470 36-239 (347)
328 2uvk_A YJHT; unknown function, 96.9 0.057 1.9E-06 51.3 18.0 127 327-455 168-328 (357)
329 3s25_A Hypothetical 7-bladed b 96.8 0.3 1E-05 45.2 23.5 196 196-449 22-239 (302)
330 2be1_A Serine/threonine-protei 96.8 0.0097 3.3E-07 56.1 11.4 202 199-426 10-236 (339)
331 2woz_A Kelch repeat and BTB do 96.8 0.33 1.1E-05 45.0 22.3 105 315-425 157-291 (318)
332 1zgk_A Kelch-like ECH-associat 96.6 0.19 6.7E-06 46.4 19.4 188 196-424 68-290 (308)
333 3das_A Putative oxidoreductase 96.6 0.54 1.8E-05 44.4 27.2 230 192-451 34-326 (347)
334 2zwa_A Leucine carboxyl methyl 96.5 0.27 9.2E-06 51.4 21.4 223 197-453 396-675 (695)
335 2woz_A Kelch repeat and BTB do 96.4 0.16 5.6E-06 47.2 17.2 131 316-454 109-264 (318)
336 2g8s_A Glucose/sorbosone dehyd 96.3 0.061 2.1E-06 51.2 13.9 142 310-452 22-216 (353)
337 1xi4_A Clathrin heavy chain; a 96.0 0.1 3.5E-06 57.7 15.3 202 140-377 114-330 (1630)
338 2uvk_A YJHT; unknown function, 95.9 0.34 1.2E-05 45.8 17.1 109 316-427 200-348 (357)
339 1xi4_A Clathrin heavy chain; a 95.6 0.7 2.4E-05 51.4 19.6 210 207-427 46-295 (1630)
340 1tl2_A L10, protein (tachylect 95.4 0.6 2.1E-05 40.7 14.8 97 310-412 92-201 (236)
341 3ei3_A DNA damage-binding prot 95.4 4.3 0.00015 44.9 35.5 182 190-408 554-754 (1158)
342 1cru_A Protein (soluble quinop 94.4 2.3 7.8E-05 41.8 18.2 32 234-268 28-59 (454)
343 3sbq_A Nitrous-oxide reductase 94.0 5.4 0.00019 39.8 22.4 58 392-450 324-394 (638)
344 3ott_A Two-component system se 93.6 8.1 0.00028 40.5 33.5 216 190-453 63-298 (758)
345 3ei3_A DNA damage-binding prot 93.5 11 0.00038 41.7 36.5 226 191-453 515-757 (1158)
346 3ott_A Two-component system se 93.2 9.6 0.00033 39.9 33.3 252 138-451 69-341 (758)
347 2zwa_A Leucine carboxyl methyl 92.5 2.1 7.1E-05 44.6 15.0 105 316-423 451-579 (695)
348 2wg3_C Hedgehog-interacting pr 91.5 7.3 0.00025 38.2 16.7 107 347-454 13-159 (463)
349 3b7f_A Glycosyl hydrolase, BNR 90.2 13 0.00043 35.3 23.2 137 310-451 119-297 (394)
350 2be1_A Serine/threonine-protei 89.6 0.82 2.8E-05 42.9 7.5 111 318-429 11-138 (339)
351 3q6k_A 43.2 kDa salivary prote 87.3 20 0.0007 33.9 24.4 170 258-450 124-341 (381)
352 3zwu_A Alkaline phosphatase PH 85.2 3 0.0001 42.3 9.1 61 392-452 477-550 (592)
353 3qhy_B Beta-lactamase inhibito 83.5 25 0.00086 31.6 18.8 213 138-420 30-245 (282)
354 4a9v_A PHOX; hydrolase, beta-p 80.9 7.7 0.00026 38.9 9.9 62 392-453 477-551 (592)
355 3kci_A Probable E3 ubiquitin-p 80.5 39 0.0013 31.9 21.0 202 190-419 53-291 (389)
356 2wg3_C Hedgehog-interacting pr 78.4 52 0.0018 32.1 27.6 113 350-463 219-370 (463)
357 4gq2_M Nucleoporin NUP120; bet 77.3 74 0.0025 34.3 17.2 31 243-274 244-274 (950)
358 3b7f_A Glycosyl hydrolase, BNR 70.8 70 0.0024 30.0 20.7 129 310-441 236-391 (394)
359 4gq2_M Nucleoporin NUP120; bet 69.1 1.3E+02 0.0044 32.4 19.3 37 392-428 237-273 (950)
360 3q6k_A 43.2 kDa salivary prote 67.9 83 0.0028 29.7 25.1 190 210-409 124-342 (381)
361 4fhn_B Nucleoporin NUP120; pro 67.2 1.4E+02 0.0049 32.7 16.8 38 392-429 239-276 (1139)
362 3zwu_A Alkaline phosphatase PH 63.6 23 0.00077 35.8 8.7 58 310-367 480-550 (592)
363 2cn3_A Xyloglucanase, beta-1,4 61.5 1.5E+02 0.0053 30.6 16.2 99 310-409 27-151 (737)
364 3qhy_B Beta-lactamase inhibito 60.5 93 0.0032 27.7 17.1 180 191-420 25-206 (282)
365 4a9v_A PHOX; hydrolase, beta-p 59.7 32 0.0011 34.5 8.7 59 309-367 479-550 (592)
366 4fhn_B Nucleoporin NUP120; pro 55.3 42 0.0014 37.0 9.8 31 243-274 246-276 (1139)
367 1sqj_A OXG-RCBH, oligoxylogluc 55.1 2E+02 0.007 30.0 23.3 58 310-368 125-190 (789)
368 1sqj_A OXG-RCBH, oligoxylogluc 51.4 2.3E+02 0.008 29.5 21.9 147 232-411 14-190 (789)
369 3uc1_A DNA gyrase subunit A; D 43.9 1.9E+02 0.0066 26.4 20.8 190 198-420 52-278 (327)
370 4d9s_A UVB-resistance protein 43.6 2.1E+02 0.0073 26.9 27.5 74 188-266 119-201 (406)
371 3f7f_A Nucleoporin NUP120; nuc 41.3 1.2E+02 0.0042 31.2 9.8 84 136-222 166-254 (729)
372 3f7f_A Nucleoporin NUP120; nuc 41.0 41 0.0014 34.7 6.3 37 391-429 222-258 (729)
373 1suu_A DNA gyrase subunit A; t 39.7 2.2E+02 0.0074 25.8 22.9 104 316-420 113-230 (312)
374 4d9s_A UVB-resistance protein 38.5 2.5E+02 0.0087 26.3 27.9 119 137-266 21-149 (406)
375 3no0_A DNA gyrase subunit A; D 38.4 2.1E+02 0.0072 25.3 17.7 155 198-377 79-245 (276)
376 3no0_A DNA gyrase subunit A; D 35.4 2.4E+02 0.0081 25.0 20.7 185 198-420 34-245 (276)
377 4hvt_A Ritya.17583.B, post-pro 35.4 3.9E+02 0.013 27.5 21.3 181 243-454 138-370 (711)
378 3uc1_A DNA gyrase subunit A; D 33.4 2.8E+02 0.0096 25.3 23.2 163 191-377 96-278 (327)
379 1wp5_A Topoisomerase IV; broke 30.6 3.1E+02 0.011 24.9 20.3 103 317-420 106-224 (323)
380 2cn3_A Xyloglucanase, beta-1,4 30.0 4.7E+02 0.016 26.9 23.7 98 310-408 136-261 (737)
381 4hvt_A Ritya.17583.B, post-pro 23.9 6E+02 0.021 26.0 23.6 137 310-450 244-413 (711)
382 1suu_A DNA gyrase subunit A; t 23.8 4E+02 0.014 24.0 20.0 137 316-455 57-223 (312)
383 3of7_A Regulator of chromosome 23.3 5E+02 0.017 24.9 26.1 73 189-266 147-232 (473)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=307.91 Aligned_cols=265 Identities=16% Similarity=0.191 Sum_probs=237.5
Q ss_pred cceeEEEEEE------cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEE
Q 011924 188 TQTQVSTLAV------KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (475)
Q Consensus 188 ~~~~v~~l~~------~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~i 261 (475)
+...|.+++| ++.+|++|+.||+|++|++...... ....+.+|...|.++++ ++++.. +++++.|++|++
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~-~~~~l~gh~~~v~~~~~--~~~~~~-l~s~s~D~~i~l 106 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD-LQWSLEGHQLGVVSVDI--SHTLPI-AASSSLDAHIRL 106 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE-EEEEECCCSSCEEEEEE--CSSSSE-EEEEETTSEEEE
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee-eeeeeccCCCCEEEEEE--CCCCCE-EEEEeCCCcEEE
Confidence 3457999998 2568999999999999999765432 23456789999999999 999985 999999999999
Q ss_pred EECCCCeeeeeee-c---cccEEeccCCceEE------EEEEeecccceEEEEee----eeeeEEECCCCcEEEEEeCCC
Q 011924 262 FDMGKYQLSKHFR-F---PWPVNVSSSYCIIL------LCRLLNFMTEKVIICLL----CLQHSSQSPDGKLLIIVGDNP 327 (475)
Q Consensus 262 wd~~~~~~~~~~~-~---~~~v~~s~~~~~l~------~~~v~d~~~~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg 327 (475)
||+.+++.+..+. + ...+.|+|++..++ .+++|+..+++...... .+.+++|+|+|++|++++.|+
T Consensus 107 Wd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg 186 (321)
T 3ow8_A 107 WDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 186 (321)
T ss_dssp EETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCC
Confidence 9999999888776 2 34577999999886 68999999887765544 578999999999999999999
Q ss_pred cEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEE
Q 011924 328 DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMAT 407 (475)
Q Consensus 328 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~ 407 (475)
.|++||+++++.+..+.+|...|.+++|+|++++|++|+.|++|+|||++. ...+..+.+|...|.+++|+|+|++|++
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s 265 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-ANLAGTLSGHASWVLNVAFCPDDTHFVS 265 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-cceeEEEcCCCCceEEEEECCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999987 7788899999999999999999999999
Q ss_pred EcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 408 AEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 408 ~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
++.|+.|+|||+.++.++..+..|.+.|.+++|+|+|++|++++.|+++.
T Consensus 266 ~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~ 315 (321)
T 3ow8_A 266 SSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIH 315 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred EeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 99999999999999999999999999999999999999999999998874
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-37 Score=310.38 Aligned_cols=270 Identities=17% Similarity=0.242 Sum_probs=239.9
Q ss_pred ceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCce
Q 011924 134 RNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGE 210 (475)
Q Consensus 134 r~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~ 210 (475)
..+.|.+....++.. .++.|.+|+..+++....+. + +...|.+++| ++++|++|+.||+
T Consensus 112 ~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~--~----------------h~~~V~~v~~~~~~~~l~sgs~D~~ 173 (410)
T 1vyh_C 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK--G----------------HTDSVQDISFDHSGKLLASCSADMT 173 (410)
T ss_dssp EEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC--C----------------CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe--c----------------cCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 344477766666664 57899999988876554332 1 2346899999 7899999999999
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceEE
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCIIL 289 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l~ 289 (475)
|++|++..... ...+.+|...|.+++| +|+++. +++|+.|++|++||+.++.++..+. |...+.
T Consensus 174 i~iwd~~~~~~---~~~~~~h~~~V~~v~~--~p~~~~-l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~--------- 238 (410)
T 1vyh_C 174 IKLWDFQGFEC---IRTMHGHDHNVSSVSI--MPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVR--------- 238 (410)
T ss_dssp CCEEETTSSCE---EECCCCCSSCEEEEEE--CSSSSE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEE---------
T ss_pred EEEEeCCCCce---eEEEcCCCCCEEEEEE--eCCCCE-EEEEeCCCeEEEEECCCCcEEEEEeCCCccEE---------
Confidence 99999976443 3667789999999999 999986 9999999999999999999888887 777888
Q ss_pred EEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecC-----------
Q 011924 290 LCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPN----------- 358 (475)
Q Consensus 290 ~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~----------- 358 (475)
+++++|+|.+|++++.|+.|++||+++++....+.+|...|.+++|+|+
T Consensus 239 --------------------~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 298 (410)
T 1vyh_C 239 --------------------MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATG 298 (410)
T ss_dssp --------------------EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCS
T ss_pred --------------------EEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcc
Confidence 9999999999999999999999999999999999999999999999996
Q ss_pred ---------CCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEe
Q 011924 359 ---------GVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI 429 (475)
Q Consensus 359 ---------g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~ 429 (475)
+.+|++|+.|++|++||+++ +.++..+.+|...|++++|+|+|++|++|+.|+.|+|||+.++.++..+.
T Consensus 299 ~~~~~~~~~g~~l~sgs~D~~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~ 377 (410)
T 1vyh_C 299 SETKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377 (410)
T ss_dssp CC-------CCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred ccccccCCCCCEEEEEeCCCeEEEEECCC-CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 67899999999999999987 78899999999999999999999999999999999999999999999999
Q ss_pred ccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 430 DFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 430 ~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
.|.+.|.+++|+|++.+|++|+.|+++.
T Consensus 378 ~h~~~v~~l~~~~~~~~l~sgs~D~~i~ 405 (410)
T 1vyh_C 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVK 405 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 9999999999999999999999998875
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-36 Score=295.75 Aligned_cols=272 Identities=20% Similarity=0.280 Sum_probs=235.2
Q ss_pred ceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCce
Q 011924 134 RNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGE 210 (475)
Q Consensus 134 r~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~ 210 (475)
..+.|+++...++.. .++.|++|+..+++....+.. +...|.+++| ++++|++|+.||.
T Consensus 59 ~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~------------------~~~~v~~~~~s~~~~~l~s~~~d~~ 120 (340)
T 1got_B 59 YAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL------------------RSSWVMTCAYAPSGNYVACGGLDNI 120 (340)
T ss_dssp EEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC------------------SSSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec------------------CCccEEEEEECCCCCEEEEEeCCCe
Confidence 445577777767664 579999999887765444321 2236888888 8999999999999
Q ss_pred EEEEeCCCCCc-eEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceE
Q 011924 211 LICKHLDRPGV-SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCII 288 (475)
Q Consensus 211 i~vw~~~~~~~-~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l 288 (475)
|++|++..... ........+|.+.|.++.| ++++. +++++.|++|++||+.+++.+..+. |...|.
T Consensus 121 v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~--l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~-------- 188 (340)
T 1got_B 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQ--IVTSSGDTTCALWDIETGQQTTTFTGHTGDVM-------- 188 (340)
T ss_dssp EEEEETTTCSBSCEEEEEEECCSSCEEEEEE--EETTE--EEEEETTSCEEEEETTTTEEEEEECCCSSCEE--------
T ss_pred EEEEECccCCCcceeEEEecCCCccEEEEEE--CCCCc--EEEEECCCcEEEEECCCCcEEEEEcCCCCceE--------
Confidence 99999976542 2234556789999999999 77763 8889999999999999999888887 788899
Q ss_pred EEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCC
Q 011924 289 LLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD 368 (475)
Q Consensus 289 ~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~d 368 (475)
+++|+|++++|++++.|+.|++||+++++++..+.+|...|.+++|+|++++|++|+.|
T Consensus 189 ---------------------~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 189 ---------------------SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp ---------------------EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ---------------------EEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEECCCCCceEEEEec--CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCe
Q 011924 369 KTCRIWDLRNLSESVAVLKG--NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTES 446 (475)
Q Consensus 369 g~v~iwd~~~~~~~~~~~~~--~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~ 446 (475)
++|++||++. .+.+..+.. +...|++++|+|+|++|++|+.|+.|++||+.++..+..+.+|.+.|.+++|+|+|.+
T Consensus 248 ~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~ 326 (340)
T 1got_B 248 ATCRLFDLRA-DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA 326 (340)
T ss_dssp SCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred CcEEEEECCC-CcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCE
Confidence 9999999987 566666543 2347999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcc
Q 011924 447 LFIGVWDRTYG 457 (475)
Q Consensus 447 l~~~~~D~~~~ 457 (475)
|++|+.|+++.
T Consensus 327 l~s~s~D~~i~ 337 (340)
T 1got_B 327 VATGSWDSFLK 337 (340)
T ss_dssp EEEEETTSCEE
T ss_pred EEEEcCCccEE
Confidence 99999999875
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=300.14 Aligned_cols=284 Identities=17% Similarity=0.213 Sum_probs=226.7
Q ss_pred cceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE-cCcEEEEEecCceE
Q 011924 133 LRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-KDKLLVAGGFQGEL 211 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~lvsg~~dg~i 211 (475)
+..+.|++++..|...++..+++|+.. ..++... ...+...... ....+...|.+++| ..+.|++|+.||.|
T Consensus 33 v~~~~fs~dG~~l~~~sd~~~r~Wd~~----~~~~~~~-~~~~~~~~~~--~~~~~~~~v~~~~~s~d~~l~~~s~dg~v 105 (344)
T 4gqb_B 33 LEAARYRSDGALLLGASSLSGRCWAGS----LWLFKDP-CAAPNEGFCS--AGVQTEAGVADLTWVGERGILVASDSGAV 105 (344)
T ss_dssp EEEEEECTTSCEEEEEECCSSSCCCEE----EEEESSG-GGTTCGGGCS--EEEEESSCEEEEEEETTTEEEEEETTSEE
T ss_pred EEEEEECCCCCEEEEEeCCceEEeece----eeeeccc-cccCCcceee--eeeccCCCEEEEEEeCCCeEEEEECCCEE
Confidence 445568888887777777777778631 1111110 0111110000 11122357999999 66789999999999
Q ss_pred EEEeCCCCCceEEE-eeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceEE
Q 011924 212 ICKHLDRPGVSFCS-RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCIIL 289 (475)
Q Consensus 212 ~vw~~~~~~~~~~~-~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l~ 289 (475)
++||+...+..... ....+|...|++++| +|+|+. |++|+.|++|++||+.+++++..+. |...|.
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~--spdg~~-l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~--------- 173 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSV--LSSGTQ-AVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT--------- 173 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEE--CTTSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEE---------
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEE--CCCCCE-EEEEeCCCeEEEEECCCCcEEEEEcCcCCceE---------
Confidence 99999877654332 345689999999999 999986 9999999999999999999998887 888999
Q ss_pred EEEEeecccceEEEEeeeeeeEEECCCC-cEEEEEeCCCcEEEEECCCCceEEEee--cCCCCeEEEEEec-CCCEEEEE
Q 011924 290 LCRLLNFMTEKVIICLLCLQHSSQSPDG-KLLIIVGDNPDGLLVDSMTGKTIASLC--GHLDFSFASAWHP-NGVTFATG 365 (475)
Q Consensus 290 ~~~v~d~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~dg~i~iwd~~~~~~~~~l~--~h~~~v~~~~~sp-~g~~l~t~ 365 (475)
+++|+|++ .+|++++.|+.|++||++++++...+. .|...+.+++|+| ++++|++|
T Consensus 174 --------------------~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 174 --------------------CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp --------------------EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred --------------------EEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 99999987 478999999999999999999888775 3556799999999 56789999
Q ss_pred eCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCC-CEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCC
Q 011924 366 NQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG-RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDT 444 (475)
Q Consensus 366 s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg-~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg 444 (475)
+.|++|+|||+++ ++++..+.+|...|++++|+|+| ++||+|+.|++|+|||+.+++. ..+.+|.+.|.+++|+|++
T Consensus 234 ~~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-~~~~~H~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 234 DENGTVSLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-FRSQAHRDFVRDATWSPLN 311 (344)
T ss_dssp ETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-EEECCCSSCEEEEEECSSS
T ss_pred ccCCcEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-EEEcCCCCCEEEEEEeCCC
Confidence 9999999999987 78899999999999999999998 6899999999999999998865 4577899999999999999
Q ss_pred Ce-EEEEEecCCcc
Q 011924 445 ES-LFIGVWDRTYG 457 (475)
Q Consensus 445 ~~-l~~~~~D~~~~ 457 (475)
+. |++|++|+++.
T Consensus 312 ~~llas~s~D~~v~ 325 (344)
T 4gqb_B 312 HSLLTTVGWDHQVV 325 (344)
T ss_dssp TTEEEEEETTSCEE
T ss_pred CeEEEEEcCCCeEE
Confidence 76 55789999875
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.3e-36 Score=291.53 Aligned_cols=279 Identities=20% Similarity=0.293 Sum_probs=235.0
Q ss_pred eeeccc-ceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEE
Q 011924 128 ILHFQL-RNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLV 203 (475)
Q Consensus 128 ~~h~~l-r~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lv 203 (475)
..|... ..+.|.++...|+.. .++.|++|+..+++....+.. +...|.+++| ++.+|+
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~------------------~~~~v~~~~~sp~g~~la 122 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM------------------PCTWVMACAYAPSGCAIA 122 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC------------------SSSCCCEEEECTTSSEEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec------------------CCCCEEEEEECCCCCEEE
Confidence 345544 344477777777774 579999999887765544332 1235777888 899999
Q ss_pred EEecCceEEEEeCCCCCc---eEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccE
Q 011924 204 AGGFQGELICKHLDRPGV---SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPV 279 (475)
Q Consensus 204 sg~~dg~i~vw~~~~~~~---~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v 279 (475)
+|+.||.+++|++..... .........|...|.++.| +|++.. +++++.|++|++||+++++++..+. |...+
T Consensus 123 sg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~-l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v 199 (354)
T 2pbi_B 123 CGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF--TNSDMQ-ILTASGDGTCALWDVESGQLLQSFHGHGADV 199 (354)
T ss_dssp EESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE--CSSSSE-EEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred EeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEE--eCCCCE-EEEEeCCCcEEEEeCCCCeEEEEEcCCCCCe
Confidence 999999999999864321 1112344578899999999 999986 8999999999999999999988887 77888
Q ss_pred EeccCCceEEEEEEeecccceEEEEeeeeeeEEECC--CCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEec
Q 011924 280 NVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP--DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHP 357 (475)
Q Consensus 280 ~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp--~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp 357 (475)
. +++|+| +|++|++++.|+.|++||+++++++..+.+|...|.+++|+|
T Consensus 200 ~-----------------------------~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p 250 (354)
T 2pbi_B 200 L-----------------------------CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP 250 (354)
T ss_dssp E-----------------------------EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred E-----------------------------EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC
Confidence 8 899987 578999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCCceEEEEecC--CCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCe
Q 011924 358 NGVTFATGNQDKTCRIWDLRNLSESVAVLKGN--LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEI 435 (475)
Q Consensus 358 ~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~--~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i 435 (475)
++++|++|+.|++|++||++. .+.+..+..+ ...+.+++|+|+|++|++|+.|+.|+|||+.++..+..+.+|.+.|
T Consensus 251 ~~~~l~s~s~D~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v 329 (354)
T 2pbi_B 251 SGDAFASGSDDATCRLYDLRA-DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRV 329 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCC-CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcE
Confidence 999999999999999999987 5666666543 3478999999999999999999999999999999998999999999
Q ss_pred EEEEEcCCCCeEEEEEecCCcc
Q 011924 436 SGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 436 ~~l~fspdg~~l~~~~~D~~~~ 457 (475)
.+++|+|+|++|++|+.|+++.
T Consensus 330 ~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 330 STLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp EEEEECTTSSCEEEEETTSEEE
T ss_pred EEEEECCCCCEEEEEcCCCCEE
Confidence 9999999999999999998774
No 6
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.5e-36 Score=294.94 Aligned_cols=291 Identities=17% Similarity=0.200 Sum_probs=238.7
Q ss_pred eeccc-ceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCcc---ccccceeEEEEEE--cCcEE
Q 011924 129 LHFQL-RNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLL---EGFTQTQVSTLAV--KDKLL 202 (475)
Q Consensus 129 ~h~~l-r~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~l~~--~~~~l 202 (475)
.|... ..+.|+++...|.+.++..+.+|+..+++....+.. +.... ..+..+. .......|.+++| ++++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~--~~~~~-~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSD--DSAAN-KDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC--------------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecC--ccccc-cccccccccccCCCceeEEEEEECCCCCEE
Confidence 35443 445588888888888889999999888766544322 11000 0011111 0112235899999 89999
Q ss_pred EEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEec
Q 011924 203 VAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVS 282 (475)
Q Consensus 203 vsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~s 282 (475)
++|+.||.|++|++...... ..+.+|...|.+++| +|++.. |++++.|++|++||+.+++....+.+...+.
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~---~~~~~h~~~v~~~~~--~p~~~~-l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~-- 210 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIV---MILQGHEQDIYSLDY--FPSGDK-LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVT-- 210 (393)
T ss_dssp EEEETTSCEEEEETTTTEEE---EEECCCSSCEEEEEE--CTTSSE-EEEEETTSEEEEEETTTTEEEEEEECSSCEE--
T ss_pred EEEcCCCeEEEEECCCCcEE---EEEccCCCCEEEEEE--cCCCCE-EEEecCCCcEEEEECCCCeeEEEEEcCCCcE--
Confidence 99999999999999865433 566789999999999 999986 8999999999999999999888888777888
Q ss_pred cCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECCCCceEEEe-------ecCCCCeEEEE
Q 011924 283 SSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASL-------CGHLDFSFASA 354 (475)
Q Consensus 283 ~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~l-------~~h~~~v~~~~ 354 (475)
+++|+| ++++|++++.|+.|++||+++++.+..+ .+|...|.+++
T Consensus 211 ---------------------------~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 211 ---------------------------TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp ---------------------------EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred ---------------------------EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 999999 9999999999999999999999888777 57999999999
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCC-----------CceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCe
Q 011924 355 WHPNGVTFATGNQDKTCRIWDLRNL-----------SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 423 (475)
Q Consensus 355 ~sp~g~~l~t~s~dg~v~iwd~~~~-----------~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~ 423 (475)
|+|++++|++|+.|++|++||++.. ..+...+.+|...|.+++|+|++++|++|+.|+.|++||+.++.
T Consensus 264 ~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 264 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe
Confidence 9999999999999999999999752 23566788899999999999999999999999999999999999
Q ss_pred eEEEEeccCCCeEEEEEcC------CCCeEEEEEecCCcc
Q 011924 424 EKEQEIDFFGEISGISFSP------DTESLFIGVWDRTYG 457 (475)
Q Consensus 424 ~~~~~~~~~~~i~~l~fsp------dg~~l~~~~~D~~~~ 457 (475)
.+..+.+|.+.|.+++|+| ++++|++|+.|+++.
T Consensus 344 ~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~ 383 (393)
T 1erj_A 344 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKAR 383 (393)
T ss_dssp EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEE
T ss_pred EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEE
Confidence 9999999999999999986 688999999999874
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-35 Score=282.92 Aligned_cols=268 Identities=12% Similarity=0.113 Sum_probs=227.9
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
.+.+.|+++...|+.. .++.|.+|+..++.....+.. +..+|.+++| ++++|++|+.||
T Consensus 16 V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV------------------TETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC------------------CSSCEEEEEEEGGGTEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeec------------------cCCcEEEEEEeCCCCEEEEECCCC
Confidence 3555577777777764 579999999887755443321 2236888888 899999999999
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC-eeeeeee-ccccEEeccCCce
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-QLSKHFR-FPWPVNVSSSYCI 287 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~-~~~~~~~-~~~~v~~s~~~~~ 287 (475)
.|++|++.+.... ..+..|...|.+++| +|+++. |++|+.|++|++||++++ .....+. |...|.
T Consensus 78 ~i~vwd~~~~~~~---~~~~~h~~~v~~~~~--~~~~~~-l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~------- 144 (304)
T 2ynn_A 78 RIRVFNYNTGEKV---VDFEAHPDYIRSIAV--HPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM------- 144 (304)
T ss_dssp EEEEEETTTCCEE---EEEECCSSCEEEEEE--CSSSSE-EEEEETTSCEEEEEGGGTTEEEEEECCCCSCEE-------
T ss_pred EEEEEECCCCcEE---EEEeCCCCcEEEEEE--cCCCCE-EEEECCCCeEEEEECCCCcchhhhhcccCCcEE-------
Confidence 9999999876544 556789999999999 999986 999999999999999876 4445554 778888
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECCCCceEEEee-cCCCCeEEEEEec--CCCEEE
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLC-GHLDFSFASAWHP--NGVTFA 363 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~l~-~h~~~v~~~~~sp--~g~~l~ 363 (475)
+++|+| ++.+|++++.|+.|++||++++.+...+. +|...+..++|+| ++.+|+
T Consensus 145 ----------------------~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (304)
T 2ynn_A 145 ----------------------CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (304)
T ss_dssp ----------------------EEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred ----------------------EEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEE
Confidence 999999 68999999999999999999887766654 5668899999987 778999
Q ss_pred EEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCC
Q 011924 364 TGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 443 (475)
Q Consensus 364 t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspd 443 (475)
+|+.|++|++||+++ ++++..+.+|...|.+++|+|++++|++|+.|+.|+|||+.+++....+..|...+.+++|+|+
T Consensus 203 s~s~D~~i~iWd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (304)
T 2ynn_A 203 TASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPT 281 (304)
T ss_dssp EEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTT
T ss_pred EEcCCCeEEEEeCCC-CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCC
Confidence 999999999999987 7899999999999999999999999999999999999999999999999889999999999998
Q ss_pred CC--eEEEEEecC
Q 011924 444 TE--SLFIGVWDR 454 (475)
Q Consensus 444 g~--~l~~~~~D~ 454 (475)
+. +|++|+.|+
T Consensus 282 ~~~~~~asg~~~g 294 (304)
T 2ynn_A 282 GRKNYIASGFDNG 294 (304)
T ss_dssp CGGGCEEEEETTE
T ss_pred CCceEEEEecCCc
Confidence 85 577777665
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.8e-36 Score=284.65 Aligned_cols=233 Identities=17% Similarity=0.235 Sum_probs=208.3
Q ss_pred eeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 190 TQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 190 ~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
..|.+++| ++.+|++|+.||.|++|++.+.... ..+..|...|.++.| +|+++. |++|+.|++|++||+.++
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~---~~~~~~~~~v~~~~~--~~~~~~-l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEV---RSIQVTETPVRAGKF--IARKNW-IIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE---EEEECCSSCEEEEEE--EGGGTE-EEEEETTSEEEEEETTTC
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcee---EEeeccCCcEEEEEE--eCCCCE-EEEECCCCEEEEEECCCC
Confidence 47999999 8999999999999999999865433 556678889999999 999986 999999999999999999
Q ss_pred eeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCC-ceEEEeec
Q 011924 268 QLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTG-KTIASLCG 345 (475)
Q Consensus 268 ~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~-~~~~~l~~ 345 (475)
+.+..+. |...|. +++|+|++++|++++.|+.|++||++++ .....+.+
T Consensus 88 ~~~~~~~~h~~~v~-----------------------------~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~ 138 (304)
T 2ynn_A 88 EKVVDFEAHPDYIR-----------------------------SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG 138 (304)
T ss_dssp CEEEEEECCSSCEE-----------------------------EEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC
T ss_pred cEEEEEeCCCCcEE-----------------------------EEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc
Confidence 9888887 888899 9999999999999999999999999887 45677899
Q ss_pred CCCCeEEEEEec-CCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEcc--CCCEEEEEcCCCeEEEEECCCC
Q 011924 346 HLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTS--DGRYMATAEPADFVHVYDVKSG 422 (475)
Q Consensus 346 h~~~v~~~~~sp-~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~sp--dg~~la~~~~dg~i~iwd~~~~ 422 (475)
|...|.+++|+| ++.+|++|+.|++|++||++..........++...+..+.|+| ++++|++|+.|+.|+|||++++
T Consensus 139 h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 139 HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp CCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT
T ss_pred cCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC
Confidence 999999999999 6899999999999999999874444444445667899999987 7789999999999999999999
Q ss_pred eeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 423 YEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 423 ~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
.++..+.+|...|..++|+|++++|++|+.|+++.
T Consensus 219 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~ 253 (304)
T 2ynn_A 219 SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLK 253 (304)
T ss_dssp EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEE
Confidence 99999999999999999999999999999998874
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-35 Score=296.17 Aligned_cols=234 Identities=15% Similarity=0.270 Sum_probs=217.6
Q ss_pred cceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC
Q 011924 188 TQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (475)
Q Consensus 188 ~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~ 265 (475)
+..+|++++| ++.+|++|+.||.|++|++.+.... ..+.+|...|.+++| +|+++. |++|+.|++|++||+.
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~---~~l~~h~~~V~~v~~--~~~~~~-l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE---RTLKGHTDSVQDISF--DHSGKL-LASCSADMTIKLWDFQ 180 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC---EEECCCSSCEEEEEE--CTTSSE-EEEEETTSCCCEEETT
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE---EEEeccCCcEEEEEE--cCCCCE-EEEEeCCCeEEEEeCC
Confidence 4458999999 7899999999999999999876654 566789999999999 999985 9999999999999999
Q ss_pred CCeeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEee
Q 011924 266 KYQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC 344 (475)
Q Consensus 266 ~~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~ 344 (475)
+++++..+. |...|. +++|+|++++|++++.|+.|++||++++.++..+.
T Consensus 181 ~~~~~~~~~~h~~~V~-----------------------------~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~ 231 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVS-----------------------------SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231 (410)
T ss_dssp SSCEEECCCCCSSCEE-----------------------------EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCceeEEEcCCCCCEE-----------------------------EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 998888776 788899 99999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccC--------------------CCE
Q 011924 345 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD--------------------GRY 404 (475)
Q Consensus 345 ~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spd--------------------g~~ 404 (475)
+|...|.+++|+|++++|++|+.|++|++||++. ..+...+.+|...|.+++|+|+ |.+
T Consensus 232 ~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 310 (410)
T 1vyh_C 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF 310 (410)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCE
T ss_pred CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCE
Confidence 9999999999999999999999999999999987 7888899999999999999996 779
Q ss_pred EEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 405 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 405 la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
|++|+.|+.|++||+.++.++..+.+|.+.|.+++|+|+|++|++|+.|+++.
T Consensus 311 l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~ 363 (410)
T 1vyh_C 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363 (410)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEE
T ss_pred EEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 99999999999999999999999999999999999999999999999998764
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.5e-36 Score=295.95 Aligned_cols=279 Identities=20% Similarity=0.279 Sum_probs=230.2
Q ss_pred eecc-cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEE
Q 011924 129 LHFQ-LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVA 204 (475)
Q Consensus 129 ~h~~-lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvs 204 (475)
.|.. ...+.|+++...|+.. .++.|++|+..+++....+.. | ...|.+++| ++++|++
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~--h----------------~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL--H----------------CPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC--C----------------CTTCCCCEECTTSSEEEE
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec--C----------------CCCEEEEEECCCCCEEEE
Confidence 3443 3445588887777775 579999999888765544332 1 124666777 8999999
Q ss_pred EecCceEEEEeCCCCC----ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee------
Q 011924 205 GGFQGELICKHLDRPG----VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR------ 274 (475)
Q Consensus 205 g~~dg~i~vw~~~~~~----~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~------ 274 (475)
|+.|+.+++|++.... .......+.+|.+.+.++.| +|++...|++|+.|++|++||+.+++.+..+.
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~--~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~ 203 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQY--VPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG 203 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBC--CSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEE--ecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC
Confidence 9999999999986432 11112456789999999988 88765569999999999999999998877662
Q ss_pred ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECC-CCceEEEeecCCCCeEE
Q 011924 275 FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSM-TGKTIASLCGHLDFSFA 352 (475)
Q Consensus 275 ~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~-~~~~~~~l~~h~~~v~~ 352 (475)
|...+. +++|+| ++++|++|+.|+.|++||++ .++.+..+.+|...|.+
T Consensus 204 h~~~v~-----------------------------~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~ 254 (380)
T 3iz6_a 204 HTADVL-----------------------------SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINS 254 (380)
T ss_dssp CCSCEE-----------------------------EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCE
T ss_pred CccCeE-----------------------------EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEE
Confidence 455677 899987 89999999999999999998 56788899999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCC-------CceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeE
Q 011924 353 SAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL-------GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEK 425 (475)
Q Consensus 353 ~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~-------~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~ 425 (475)
++|+|++++|++|+.|++|++||+++ +.++..+..+. ..|++++|+|+|++|++|+.||.|+|||+.++..+
T Consensus 255 v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 255 VKFFPDGQRFGTGSDDGTCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp EEECTTSSEEEEECSSSCEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred EEEecCCCeEEEEcCCCeEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 99999999999999999999999987 67777776533 24899999999999999999999999999988877
Q ss_pred EEE----eccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 426 EQE----IDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 426 ~~~----~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
..+ ..|.+.|.+++|+|+|++|++|++|+++.
T Consensus 334 ~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 334 LNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp EEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred EEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 766 46889999999999999999999999874
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-35 Score=290.42 Aligned_cols=277 Identities=16% Similarity=0.242 Sum_probs=218.7
Q ss_pred cceeEEecCCCeEEEec-------CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE-cCcEEEE
Q 011924 133 LRNLVWATSKHDVYLMS-------HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-KDKLLVA 204 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~-------~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~lvs 204 (475)
++.+.|++++..|...+ ++.+.+|+..++.....+.. ....+...|.+++| ..+.+++
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~--------------~~~~~~~~V~~~~~s~d~~~l~ 110 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCT--------------AGVQTEAGVTDVAWVSEKGILV 110 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCS--------------EEEECSSCEEEEEEETTTEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEec--------------ccCCCCCCEEEEEEcCCCCEEE
Confidence 34455888888777765 45677777655432110000 00112346999999 5556778
Q ss_pred EecCceEEEEeCCCCCceEE-EeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEec
Q 011924 205 GGFQGELICKHLDRPGVSFC-SRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVS 282 (475)
Q Consensus 205 g~~dg~i~vw~~~~~~~~~~-~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s 282 (475)
++.+|+|++|++...+.... .....+|...|.+++| +|+|+. |++++.|++|++||+.+++.+..+. |...+.
T Consensus 111 ~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~--spdg~~-l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~-- 185 (357)
T 4g56_B 111 ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSV--FSDGTQ-AVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVN-- 185 (357)
T ss_dssp EETTSCEEEC--------CCCCEEECCCSSCEEEEEE--CSSSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEE--
T ss_pred EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEE--CCCCCE-EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE--
Confidence 88999999999976553321 1234578999999999 999986 9999999999999999999988887 788899
Q ss_pred cCCceEEEEEEeecccceEEEEeeeeeeEEECCCCc-EEEEEeCCCcEEEEECCCCceEEEee--cCCCCeEEEEEecC-
Q 011924 283 SSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGK-LLIIVGDNPDGLLVDSMTGKTIASLC--GHLDFSFASAWHPN- 358 (475)
Q Consensus 283 ~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~dg~i~iwd~~~~~~~~~l~--~h~~~v~~~~~sp~- 358 (475)
+++|+|++. ++++++.|+.|++||+++++++..+. .|...+.+++|+|+
T Consensus 186 ---------------------------~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~ 238 (357)
T 4g56_B 186 ---------------------------CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEK 238 (357)
T ss_dssp ---------------------------EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTS
T ss_pred ---------------------------EEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcc
Confidence 999999875 78899999999999999988776554 46778999999996
Q ss_pred CCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCC-CEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEE
Q 011924 359 GVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG-RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISG 437 (475)
Q Consensus 359 g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg-~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 437 (475)
+.+|++|+.|++|++||+++ .+++..+.+|...|++++|+|++ ++||+|+.|++|+|||+++++.+. ...|.+.|++
T Consensus 239 ~~~la~g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~-~~~H~~~V~~ 316 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR-DLSHRDFVTG 316 (357)
T ss_dssp TTEEEEEESSSCEEEEESSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE-ECCCSSCEEE
T ss_pred cceEEEeecccceeEEECCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE-ECCCCCCEEE
Confidence 57899999999999999987 78889999999999999999987 689999999999999999987654 4589999999
Q ss_pred EEEcC-CCCeEEEEEecCCcc
Q 011924 438 ISFSP-DTESLFIGVWDRTYG 457 (475)
Q Consensus 438 l~fsp-dg~~l~~~~~D~~~~ 457 (475)
++|+| ++.+|++++.|+++.
T Consensus 317 vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 317 VAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEECSSSTTEEEEEETTSCEE
T ss_pred EEEeCCCCCEEEEEcCCCeEE
Confidence 99999 899999999999875
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.5e-34 Score=273.60 Aligned_cols=263 Identities=16% Similarity=0.214 Sum_probs=221.2
Q ss_pred ceeEEEEEE---cCcEEEEEecCceEEEEeCCCCCc--eEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEE
Q 011924 189 QTQVSTLAV---KDKLLVAGGFQGELICKHLDRPGV--SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFD 263 (475)
Q Consensus 189 ~~~v~~l~~---~~~~lvsg~~dg~i~vw~~~~~~~--~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd 263 (475)
...|.++++ .+++|++|+.||+|++|++..... ..+...+.+|...|.+++| +|+|+. |++++.|++|++||
T Consensus 17 ~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~--s~dg~~-l~s~s~D~~v~~wd 93 (319)
T 3frx_A 17 NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL--TADGAY-ALSASWDKTLRLWD 93 (319)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEE--CTTSSE-EEEEETTSEEEEEE
T ss_pred cceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEE--CCCCCE-EEEEeCCCEEEEEE
Confidence 347999999 347999999999999999864432 2334567889999999999 999986 99999999999999
Q ss_pred CCCCeeeeeee-cccc---EEeccCCceEE------EEEEeecccceEEEE---eeeeeeEEECCC------CcEEEEEe
Q 011924 264 MGKYQLSKHFR-FPWP---VNVSSSYCIIL------LCRLLNFMTEKVIIC---LLCLQHSSQSPD------GKLLIIVG 324 (475)
Q Consensus 264 ~~~~~~~~~~~-~~~~---v~~s~~~~~l~------~~~v~d~~~~~~~~~---~~~i~~~~~sp~------g~~l~~~~ 324 (475)
+.+++.+..+. |..+ +.|++++..++ .+++||......... ...+.+++++|. +..+++++
T Consensus 94 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~ 173 (319)
T 3frx_A 94 VATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173 (319)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEE
T ss_pred CCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe
Confidence 99999888876 5544 44889888875 589999975443322 125778999985 45899999
Q ss_pred CCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCE
Q 011924 325 DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 404 (475)
Q Consensus 325 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~ 404 (475)
.|+.|++||+++++....+.+|...|.+++|+|++++|++|+.|++|+|||++. .+++..+..+ ..|.+++|+|+|.+
T Consensus 174 ~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~-~~v~~~~~sp~~~~ 251 (319)
T 3frx_A 174 NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA-KKAMYTLSAQ-DEVFSLAFSPNRYW 251 (319)
T ss_dssp TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TEEEEEEECC-SCEEEEEECSSSSE
T ss_pred CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCC-CcEEEEEEcCCCCE
Confidence 999999999999999999999999999999999999999999999999999987 7778888764 58999999999999
Q ss_pred EEEEcCCCeEEEEECCCCeeEEEEec--------cCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 405 MATAEPADFVHVYDVKSGYEKEQEID--------FFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 405 la~~~~dg~i~iwd~~~~~~~~~~~~--------~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
|++++.+ .+++|++..+..+..+.. +...+.+++|+|||++|++|+.|+++.
T Consensus 252 la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~ 311 (319)
T 3frx_A 252 LAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIR 311 (319)
T ss_dssp EEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEE
Confidence 9998865 599999988776665543 346789999999999999999999874
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.3e-34 Score=276.04 Aligned_cols=262 Identities=17% Similarity=0.168 Sum_probs=216.1
Q ss_pred eeEEEEEE--------cCcEEEEEecCceEEEEeCCCCC----ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCC
Q 011924 190 TQVSTLAV--------KDKLLVAGGFQGELICKHLDRPG----VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC 257 (475)
Q Consensus 190 ~~v~~l~~--------~~~~lvsg~~dg~i~vw~~~~~~----~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg 257 (475)
..|+++++ ++++|++|+.||+|++|++.... ...+...+.+|...|.+++| +|++.. +++++.|+
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~--~~~~~~-l~s~s~D~ 98 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL--SQENCF-AISSSWDK 98 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE--CSSTTE-EEEEETTS
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEE--CCCCCE-EEEEcCCC
Confidence 46889987 77899999999999999987543 22334667889999999999 999986 89999999
Q ss_pred eEEEEECCCCeeeeeee-cccc---EEeccCCceEE------EEEEeecccceEEEE------eeeeeeEEECCCC----
Q 011924 258 GVRDFDMGKYQLSKHFR-FPWP---VNVSSSYCIIL------LCRLLNFMTEKVIIC------LLCLQHSSQSPDG---- 317 (475)
Q Consensus 258 ~v~iwd~~~~~~~~~~~-~~~~---v~~s~~~~~l~------~~~v~d~~~~~~~~~------~~~i~~~~~sp~g---- 317 (475)
+|++||+.+++.+..+. |... +.|+|++..++ .+++||......... ...+.+++|+|++
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 178 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSAN 178 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCS
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccccccc
Confidence 99999999998888776 5544 55999998885 589999975443322 1257899999987
Q ss_pred ------cEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCC
Q 011924 318 ------KLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLG 391 (475)
Q Consensus 318 ------~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~ 391 (475)
.+|++++.|+.|++|| ..++....+.+|...|.+++|+|+|++|++|+.|++|++||++....+...+. +..
T Consensus 179 ~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~ 256 (343)
T 2xzm_R 179 KVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGS 256 (343)
T ss_dssp CCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSS
T ss_pred ccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCC
Confidence 7899999999999999 45677788999999999999999999999999999999999965455555553 345
Q ss_pred ceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEE--EEe-----------ccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 392 AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE--QEI-----------DFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 392 ~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~--~~~-----------~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
.|.+++|+|++++|++++ |+.|++||+.++.... .+. +|...|.+++|+|+|++|++|+.|+++.
T Consensus 257 ~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~ 334 (343)
T 2xzm_R 257 TINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIR 334 (343)
T ss_dssp CEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEE
T ss_pred cEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEE
Confidence 799999999999887664 7779999998765433 332 4677899999999999999999998774
No 14
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.2e-33 Score=290.19 Aligned_cols=292 Identities=19% Similarity=0.292 Sum_probs=241.5
Q ss_pred ceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCce
Q 011924 134 RNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGE 210 (475)
Q Consensus 134 r~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~ 210 (475)
..+.+.++...++.. .++.+.+|+.. ++.... +.+ +...|.++++ ++.+|++++.+|.
T Consensus 266 ~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~--~~~----------------h~~~v~~~~~~~~~~~l~t~~~d~~ 326 (577)
T 2ymu_A 266 NGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQT--LTG----------------HSSSVWGVAFSPDGQTIASASDDKT 326 (577)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETT-SCEEEE--ECC----------------CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEE--Eec----------------CCCCeEEEEECCCCCEEEEEeCCCe
Confidence 344466666666654 56788999853 322222 111 2246888888 7899999999999
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccc---cEEeccCCc
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPW---PVNVSSSYC 286 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~---~v~~s~~~~ 286 (475)
|++|++.... ......|...+.++++ +|+|+. +++++.|+.|++|+. +++.+..+. +.. .+.|+|++.
T Consensus 327 i~~w~~~~~~----~~~~~~~~~~v~~~~~--s~~g~~-l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~ 398 (577)
T 2ymu_A 327 VKLWNRNGQH----LQTLTGHSSSVWGVAF--SPDGQT-IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQ 398 (577)
T ss_dssp EEEEETTSCE----EEEECCCSSCEEEEEE--CTTSSE-EEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSS
T ss_pred EEEEeCCCCe----eEEEeCCCCCEEEEEE--CCCCCE-EEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCC
Confidence 9999986432 2455678889999999 999986 899999999999996 455555555 444 455999998
Q ss_pred eEE------EEEEeecccceEEEEee----eeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEe
Q 011924 287 IIL------LCRLLNFMTEKVIICLL----CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWH 356 (475)
Q Consensus 287 ~l~------~~~v~d~~~~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~s 356 (475)
.++ .+++|+.. ++...... .|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+
T Consensus 399 ~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s 476 (577)
T 2ymu_A 399 TIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS 476 (577)
T ss_dssp CEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEEC
T ss_pred EEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEc
Confidence 885 58999954 44444333 6789999999999999999999999996 678889999999999999999
Q ss_pred cCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeE
Q 011924 357 PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEIS 436 (475)
Q Consensus 357 p~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~ 436 (475)
|++++|++++.|++|++||. + ++++..+.+|...|++++|+|+|++||+++.|+.|+|||. +++.+..+.+|.+.|.
T Consensus 477 pd~~~las~~~d~~i~iw~~-~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~ 553 (577)
T 2ymu_A 477 PDGQTIASASDDKTVKLWNR-N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVW 553 (577)
T ss_dssp TTSCEEEEEETTSEEEEEET-T-SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCEEEEEcC-C-CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEE
Confidence 99999999999999999996 3 6889999999999999999999999999999999999995 6788889999999999
Q ss_pred EEEEcCCCCeEEEEEecCCcc
Q 011924 437 GISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 437 ~l~fspdg~~l~~~~~D~~~~ 457 (475)
+++|+|||++|++++.|+++.
T Consensus 554 ~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 554 GVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EEEECTTSSCEEEEETTSCEE
T ss_pred EEEEcCCCCEEEEEeCCCEEE
Confidence 999999999999999998864
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.8e-34 Score=276.14 Aligned_cols=277 Identities=18% Similarity=0.206 Sum_probs=222.2
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
...+.|+++...|... .++.|++|+..++.......+. ..+...|.+++| ++++|++|+.||
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~---------------~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLS---------------EGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEEC---------------SSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeec---------------cccCCcEEEEEECCCCCEEEEEECCC
Confidence 4556688888777775 5789999997766432221110 113347999999 889999999999
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe---eeeeee-ccccEEeccCC
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ---LSKHFR-FPWPVNVSSSY 285 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~---~~~~~~-~~~~v~~s~~~ 285 (475)
.+++|++..... .+...+.+|...|.+++| +|+++. |++++.|++|++||+..+. ++..+. +...|.
T Consensus 84 ~v~iw~~~~~~~-~~~~~~~~h~~~v~~v~~--sp~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~----- 154 (345)
T 3fm0_A 84 TTCIWKKNQDDF-ECVTTLEGHENEVKSVAW--APSGNL-LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVK----- 154 (345)
T ss_dssp CEEEEEECCC-E-EEEEEECCCSSCEEEEEE--CTTSSE-EEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEE-----
T ss_pred cEEEEEccCCCe-EEEEEccCCCCCceEEEE--eCCCCE-EEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeE-----
Confidence 999999876543 234667789999999999 999986 9999999999999997653 333443 677788
Q ss_pred ceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCc--eEEEeecCCCCeEEEEEecCCCEEE
Q 011924 286 CIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGK--TIASLCGHLDFSFASAWHPNGVTFA 363 (475)
Q Consensus 286 ~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~--~~~~l~~h~~~v~~~~~sp~g~~l~ 363 (475)
+++|+|++++|++++.|+.|++||+++++ +...+.+|...|.+++|+|+|++|+
T Consensus 155 ------------------------~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~ 210 (345)
T 3fm0_A 155 ------------------------HVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLA 210 (345)
T ss_dssp ------------------------EEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred ------------------------EEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEE
Confidence 99999999999999999999999998775 4578899999999999999999999
Q ss_pred EEeCCCeEEEEECCCCC--------------ceEEEEec-CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCee----
Q 011924 364 TGNQDKTCRIWDLRNLS--------------ESVAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE---- 424 (475)
Q Consensus 364 t~s~dg~v~iwd~~~~~--------------~~~~~~~~-~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~---- 424 (475)
+++.|++|+|||..... .++..+.+ |...|.+++|+|++..|++++.|+.|++|+...+..
T Consensus 211 s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 290 (345)
T 3fm0_A 211 SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP 290 (345)
T ss_dssp EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC
T ss_pred EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee
Confidence 99999999999974321 23444554 778999999999999999999999999999865421
Q ss_pred ----E-EEEeccCCCeEEEEEcCCCC-eEEEEEecCCcc
Q 011924 425 ----K-EQEIDFFGEISGISFSPDTE-SLFIGVWDRTYG 457 (475)
Q Consensus 425 ----~-~~~~~~~~~i~~l~fspdg~-~l~~~~~D~~~~ 457 (475)
. .....|.+.|.+++|+|++. +|++|+.|+++.
T Consensus 291 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~ 329 (345)
T 3fm0_A 291 TFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVA 329 (345)
T ss_dssp CEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred eEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEE
Confidence 1 11236889999999999984 899999999874
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.4e-34 Score=300.10 Aligned_cols=298 Identities=10% Similarity=0.095 Sum_probs=232.7
Q ss_pred ceeEEecCCC-eEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 134 RNLVWATSKH-DVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 134 r~l~~~~~~~-~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
+.+.|.+... .+.. ..++.+++|+..+.+.... +.+ +...|.+++| ++++|++|+.||
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~--l~~----------------H~~~V~~v~fspdg~~las~s~D~ 212 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKST--FGE----------------HTKFVHSVRYNPDGSLFASTGGDG 212 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEE--ECC----------------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeee--ecc----------------ccCceEEEEECCCCCEEEEEECCC
Confidence 3444666654 3444 4678999999765443322 222 2346999999 899999999999
Q ss_pred eEEEEeCCCCCceEEEeee-c------CCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee--------
Q 011924 210 ELICKHLDRPGVSFCSRTT-Y------DDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-------- 274 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~-~------~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-------- 274 (475)
.|++|++...... ..+ . .|.+.|.+++| +|+|+. |++++.|++|++||+.+++++..+.
T Consensus 213 ~i~lwd~~~g~~~---~~~~~~~~~~~~h~~~V~~v~~--spdg~~-l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~ 286 (611)
T 1nr0_A 213 TIVLYNGVDGTKT---GVFEDDSLKNVAHSGSVFGLTW--SPDGTK-IASASADKTIKIWNVATLKVEKTIPVGTRIEDQ 286 (611)
T ss_dssp CEEEEETTTCCEE---EECBCTTSSSCSSSSCEEEEEE--CTTSSE-EEEEETTSEEEEEETTTTEEEEEEECCSSGGGC
T ss_pred cEEEEECCCCcEe---eeeccccccccccCCCEEEEEE--CCCCCE-EEEEeCCCeEEEEeCCCCceeeeecCCCCccce
Confidence 9999998765543 222 2 68999999999 999986 9999999999999999877654432
Q ss_pred ------------------------------------ccc---cEEeccCCceEE------EEEEeecccceEEEEe----
Q 011924 275 ------------------------------------FPW---PVNVSSSYCIIL------LCRLLNFMTEKVIICL---- 305 (475)
Q Consensus 275 ------------------------------------~~~---~v~~s~~~~~l~------~~~v~d~~~~~~~~~~---- 305 (475)
|.. .+.|+|++..++ .+++||..+++.....
T Consensus 287 ~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h 366 (611)
T 1nr0_A 287 QLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVH 366 (611)
T ss_dssp EEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSC
T ss_pred eEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCC
Confidence 222 345888888885 4788887654321110
Q ss_pred --------------------------------------------------------------------------------
Q 011924 306 -------------------------------------------------------------------------------- 305 (475)
Q Consensus 306 -------------------------------------------------------------------------------- 305 (475)
T Consensus 367 ~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~ 446 (611)
T 1nr0_A 367 ATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVP 446 (611)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEE
T ss_pred cceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeee
Confidence
Q ss_pred --eeeeeEEECCCCcEEEEEeCCCcEEEEECCCCce--EEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCc
Q 011924 306 --LCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT--IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE 381 (475)
Q Consensus 306 --~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~--~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~ 381 (475)
..+.+++|+|+|++|++|+.|+.|++||+.++.. +.. .+|...|.+++|+|+|++|++++.|++|++||+.+..+
T Consensus 447 ~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~ 525 (611)
T 1nr0_A 447 ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE 525 (611)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE
T ss_pred cCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCc
Confidence 1246899999999999999999999999987653 233 67999999999999999999999999999999976344
Q ss_pred eEEE--EecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCee-E-EEEecc-CCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 382 SVAV--LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE-K-EQEIDF-FGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 382 ~~~~--~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~-~-~~~~~~-~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
.+.. +.+|...|.+++|+|+|++||+|+.|++|+|||+.++.. + ..+.+| .+.|.+++|+|+++ |++++.|+++
T Consensus 526 ~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i 604 (611)
T 1nr0_A 526 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNI 604 (611)
T ss_dssp ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCE
T ss_pred eeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCE
Confidence 4433 344899999999999999999999999999999987653 3 445578 78999999999998 9999999987
Q ss_pred c
Q 011924 457 G 457 (475)
Q Consensus 457 ~ 457 (475)
+
T Consensus 605 ~ 605 (611)
T 1nr0_A 605 K 605 (611)
T ss_dssp E
T ss_pred E
Confidence 5
No 17
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=279.97 Aligned_cols=311 Identities=15% Similarity=0.104 Sum_probs=249.1
Q ss_pred ccceeEEecCCC-eEEEe-cCCeEEEEec----CCCCce----EEEeccCCCCCCCCCCCCccccccceeEEEEEE--cC
Q 011924 132 QLRNLVWATSKH-DVYLM-SHFSVIHWSS----LTSSRS----QVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KD 199 (475)
Q Consensus 132 ~lr~l~~~~~~~-~v~~~-~~~~v~~w~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~ 199 (475)
.+..+.|.+... .|++. .++.|.+|+. .+++.. ....+..+.... .....+...|++++| ++
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALS------ASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------------CBCEEEEEECTTS
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccc------ccccCCCCceEEEEEcCCC
Confidence 455666887777 66664 4589999998 766620 111111111100 001113448999999 78
Q ss_pred cEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeec----
Q 011924 200 KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF---- 275 (475)
Q Consensus 200 ~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~---- 275 (475)
++|++|+.+|.|++|+.. ... ...+..|...|.+++| +|+++. |++++.|+.|++||+.+++.+..+..
T Consensus 121 ~~l~~~~~dg~i~i~~~~-~~~---~~~~~~~~~~v~~~~~--~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNKT-GAL---LNVLNFHRAPIVSVKW--NKDGTH-IISMDVENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp SEEEEEETTSCEEEEETT-SCE---EEEECCCCSCEEEEEE--CTTSSE-EEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred CEEEEEeCCCeEEEEeCC-CCe---eeeccCCCccEEEEEE--CCCCCE-EEEEecCCeEEEEECCCCcEEEEeeccccC
Confidence 999999999999999932 222 3456678999999999 999986 88999999999999999888776652
Q ss_pred ---------------cccEEeccCCceEE-----EEEEeecccceEEEEee----eeeeEEECCCCcEEEEEeCCCcEEE
Q 011924 276 ---------------PWPVNVSSSYCIIL-----LCRLLNFMTEKVIICLL----CLQHSSQSPDGKLLIIVGDNPDGLL 331 (475)
Q Consensus 276 ---------------~~~v~~s~~~~~l~-----~~~v~d~~~~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg~i~i 331 (475)
...+.|++++..+. .+++||..+++...... .+.+++|+|++++|++++.++.|++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 273 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRI 273 (425)
T ss_dssp ------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 34455777766553 68999998876654443 6789999999999999999999999
Q ss_pred EECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCC
Q 011924 332 VDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA 411 (475)
Q Consensus 332 wd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~d 411 (475)
||+++++.+..+.+|...+.+++|+|++ ++++++.|+.|++||+++ .+++..+..|...|.+++|+|+|++|++++.|
T Consensus 274 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 274 WHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp ECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEEEEcCCCCEEEEEECC
Confidence 9999999999999999999999999999 999999999999999987 78888999999999999999999999999999
Q ss_pred CeEEEEECCCCe--------------------eEEEEeccCC--CeEEEEEcCCCCeEEEEEecCCcc
Q 011924 412 DFVHVYDVKSGY--------------------EKEQEIDFFG--EISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 412 g~i~iwd~~~~~--------------------~~~~~~~~~~--~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+.|++||+.++. .+..+..|.. .|.+++|+|++++|++++.|+.+.
T Consensus 352 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 419 (425)
T 1r5m_A 352 GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGS 419 (425)
T ss_dssp SCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCE
T ss_pred CeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEE
Confidence 999999999887 7788888866 999999999999999999998764
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.6e-34 Score=297.45 Aligned_cols=269 Identities=14% Similarity=0.152 Sum_probs=223.9
Q ss_pred eeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEE
Q 011924 135 NLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELI 212 (475)
Q Consensus 135 ~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~ 212 (475)
.+-|+++...|.+..+..+++|+..+++....+ .+ +...|++++| +|++|++|+.||+|+
T Consensus 23 ~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~--~~----------------h~~~v~~~~~spdg~~lasg~~d~~v~ 84 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIY--TE----------------HSHQTTVAKTSPSGYYCASGDVHGNVR 84 (611)
T ss_dssp CCEECTTSSEEEEEETTEEEEEETTCSSCCEEE--CC----------------CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEeeCCCCCEEEeCCCCEEEEecCCCcccCeEe--cC----------------CCCceEEEEECCCCcEEEEEeCCCCEE
Confidence 344777778888888889999998765544432 11 2246889988 899999999999999
Q ss_pred EEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC----CeEEEEECCCCeeeeeee-ccccEEeccCCce
Q 011924 213 CKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCI 287 (475)
Q Consensus 213 vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d----g~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~ 287 (475)
+||+...... ....+..|.+.|.+++| +|+|+. |++++.+ +.|++||. ++....+. |...|.
T Consensus 85 lWd~~~~~~~-~~~~~~~~~~~v~~v~f--s~dg~~-l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~------- 151 (611)
T 1nr0_A 85 IWDTTQTTHI-LKTTIPVFSGPVKDISW--DSESKR-IAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMN------- 151 (611)
T ss_dssp EEESSSTTCC-EEEEEECSSSCEEEEEE--CTTSCE-EEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEE-------
T ss_pred EeECCCCcce-eeEeecccCCceEEEEE--CCCCCE-EEEEECCCCceeEEEEeeC--CCCcceecCCCCCce-------
Confidence 9999654332 23456678899999999 999997 6666554 46777774 55555555 778888
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECCCCc-EEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEe
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSPDGK-LLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 366 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s 366 (475)
+++|+|++. +|++++.|+.|++||..+++.+..+.+|...|.+++|+|+|++||+|+
T Consensus 152 ----------------------~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 152 ----------------------SVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp ----------------------EEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ----------------------EEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE
Confidence 999999987 699999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEECCCCCceEEEEe-------cCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEE------------
Q 011924 367 QDKTCRIWDLRNLSESVAVLK-------GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ------------ 427 (475)
Q Consensus 367 ~dg~v~iwd~~~~~~~~~~~~-------~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~------------ 427 (475)
.|++|++||+.+ ++++..+. +|.+.|.+++|+|+|++|++++.|++|+|||+.++..+..
T Consensus 210 ~D~~i~lwd~~~-g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~ 288 (611)
T 1nr0_A 210 GDGTIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQL 288 (611)
T ss_dssp TTSCEEEEETTT-CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEE
T ss_pred CCCcEEEEECCC-CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeE
Confidence 999999999976 67777774 7999999999999999999999999999999998765433
Q ss_pred -------------------------------EeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 428 -------------------------------EIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 428 -------------------------------~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+.+|...|.+++|+|+|++|++++.|+++.
T Consensus 289 ~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 289 GIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp EEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Confidence 236788999999999999999999998875
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-33 Score=274.53 Aligned_cols=231 Identities=17% Similarity=0.257 Sum_probs=203.7
Q ss_pred eeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 190 TQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 190 ~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
.+|.+++| ++++|++|+.||.|++|++...... .....|...|.+++| +|+++. +++++.|+.|++|++.+.
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~---~~~~~~~~~v~~~~~--s~~~~~-l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAY--APSGNY-VACGGLDNICSIYNLKTR 129 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE---EEEECSSSCEEEEEE--CTTSSE-EEEEETTCEEEEEETTTC
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcc---eEeecCCccEEEEEE--CCCCCE-EEEEeCCCeEEEEECccC
Confidence 47999999 8899999999999999999876544 455678888999999 999986 999999999999999765
Q ss_pred e----eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEE
Q 011924 268 Q----LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS 342 (475)
Q Consensus 268 ~----~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~ 342 (475)
. ....+. |...+. ++.|+|++. +++++.|+.|++||+++++++..
T Consensus 130 ~~~~~~~~~~~~h~~~v~-----------------------------~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLS-----------------------------CCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp SBSCEEEEEEECCSSCEE-----------------------------EEEEEETTE-EEEEETTSCEEEEETTTTEEEEE
T ss_pred CCcceeEEEecCCCccEE-----------------------------EEEECCCCc-EEEEECCCcEEEEECCCCcEEEE
Confidence 2 333444 677788 999998876 88899999999999999999999
Q ss_pred eecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q 011924 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422 (475)
Q Consensus 343 l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~ 422 (475)
+.+|...|.+++|+|++++|++|+.|++|++||+++ +.++..+.+|...|++++|+|+|++|++|+.|+.|+|||++++
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 999999999999999999999999999999999987 7888999999999999999999999999999999999999998
Q ss_pred eeEEEEec--cCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 423 YEKEQEID--FFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 423 ~~~~~~~~--~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
..+..+.. +...|.+++|+|+|++|++|+.|+.+.
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEE
Confidence 87766542 235799999999999999999887653
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.2e-32 Score=263.39 Aligned_cols=271 Identities=13% Similarity=0.206 Sum_probs=229.2
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
.+.+.|.++...++.. .++.+.+|+..+++....+. + +...|.+++| ++++|++|+.||
T Consensus 26 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~--~----------------h~~~v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--G----------------HKLGISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--C----------------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc--c----------------CCCceEEEEEcCCCCEEEEECCCC
Confidence 3455577777777664 57899999987776544332 1 2346899999 889999999999
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceE
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCII 288 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l 288 (475)
.|++|++...... ..+..|...|.++.| +|+++. +++++.|++|++||+++++.+..+. +..++.
T Consensus 88 ~i~vwd~~~~~~~---~~~~~~~~~v~~~~~--~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~-------- 153 (312)
T 4ery_A 88 TLKIWDVSSGKCL---KTLKGHSNYVFCCNF--NPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS-------- 153 (312)
T ss_dssp EEEEEETTTCCEE---EEEECCSSCEEEEEE--CSSSSE-EEEEETTSCEEEEETTTCCEEEEECCCSSCEE--------
T ss_pred EEEEEECCCCcEE---EEEcCCCCCEEEEEE--cCCCCE-EEEEeCCCcEEEEECCCCEEEEEecCCCCcEE--------
Confidence 9999999876544 556678899999999 999986 9999999999999999998888776 677888
Q ss_pred EEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEee-cCCCCeEEEEEecCCCEEEEEeC
Q 011924 289 LLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC-GHLDFSFASAWHPNGVTFATGNQ 367 (475)
Q Consensus 289 ~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~-~h~~~v~~~~~sp~g~~l~t~s~ 367 (475)
+++|+|++++|++++.|+.|++||+++++.+..+. .+...+.+++|+|++++|++++.
T Consensus 154 ---------------------~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 154 ---------------------AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp ---------------------EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET
T ss_pred ---------------------EEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 99999999999999999999999999998887764 46678999999999999999999
Q ss_pred CCeEEEEECCCCCceEEEEecCCCceE--EEEE-ccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCC
Q 011924 368 DKTCRIWDLRNLSESVAVLKGNLGAIR--SIRY-TSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDT 444 (475)
Q Consensus 368 dg~v~iwd~~~~~~~~~~~~~~~~~v~--~l~~-spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg 444 (475)
|+.|++||+++ ++++..+.+|...+. ...+ .+++++|++|+.|+.|++||+.++..+..+.+|...|.+++|+|++
T Consensus 213 d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~ 291 (312)
T 4ery_A 213 DNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 291 (312)
T ss_dssp TTEEEEEETTT-TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSS
T ss_pred CCeEEEEECCC-CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcC
Confidence 99999999987 788888888765432 2234 4688999999999999999999999999999999999999999999
Q ss_pred CeEEEEE--ecCCcc
Q 011924 445 ESLFIGV--WDRTYG 457 (475)
Q Consensus 445 ~~l~~~~--~D~~~~ 457 (475)
++|++++ .|+++.
T Consensus 292 ~~l~s~~~~~d~~i~ 306 (312)
T 4ery_A 292 NIIASAALENDKTIK 306 (312)
T ss_dssp SEEEEEECTTTCCEE
T ss_pred CceEEEEccCCccEE
Confidence 9999998 477664
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=269.53 Aligned_cols=264 Identities=16% Similarity=0.265 Sum_probs=221.9
Q ss_pred ceeEEecC----CCeEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEe
Q 011924 134 RNLVWATS----KHDVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGG 206 (475)
Q Consensus 134 r~l~~~~~----~~~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~ 206 (475)
..+.|++. ...|+. ..++.|++|+...+.......+.|| ...|.++++ ++.++++|+
T Consensus 36 ~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh----------------~~~v~~~~~~~~~~~l~s~s 99 (321)
T 3ow8_A 36 WSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGH----------------QLGVVSVDISHTLPIAASSS 99 (321)
T ss_dssp EEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCC----------------SSCEEEEEECSSSSEEEEEE
T ss_pred EEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccC----------------CCCEEEEEECCCCCEEEEEe
Confidence 34446543 234554 4579999999876654444444433 236889998 788999999
Q ss_pred cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-c---cccEEec
Q 011924 207 FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-F---PWPVNVS 282 (475)
Q Consensus 207 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~---~~~v~~s 282 (475)
.||.|++|++...... ..+..+...+.+++| +|+++. |++++.|+.|++|++.+++....+. + ...+.|+
T Consensus 100 ~D~~i~lWd~~~~~~~---~~~~~~~~~~~~~~~--spdg~~-l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~s 173 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQI---KSIDAGPVDAWTLAF--SPDSQY-LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 173 (321)
T ss_dssp TTSEEEEEETTTTEEE---EEEECCTTCCCCEEE--CTTSSE-EEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEEC
T ss_pred CCCcEEEEECCCCCEE---EEEeCCCccEEEEEE--CCCCCE-EEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEEC
Confidence 9999999999875543 445567777888999 999986 9999999999999999988777665 2 2356699
Q ss_pred cCCceEE------EEEEeecccceEEEEee----eeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEE
Q 011924 283 SSYCIIL------LCRLLNFMTEKVIICLL----CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFA 352 (475)
Q Consensus 283 ~~~~~l~------~~~v~d~~~~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~ 352 (475)
|++..++ .+++||..+++.+..+. .|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLN 253 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEE
Confidence 9999886 58999999998877655 6889999999999999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECC
Q 011924 353 SAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420 (475)
Q Consensus 353 ~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~ 420 (475)
++|+|++++|++++.|++|+|||+++ ++++..+.+|...|.+++|+|+|++|++++.|+.|+|||+.
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCC-CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999987 78899999999999999999999999999999999999964
No 22
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.9e-34 Score=275.41 Aligned_cols=236 Identities=15% Similarity=0.142 Sum_probs=201.4
Q ss_pred eEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe
Q 011924 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~ 268 (475)
.|.+++| ++++|++|+.||.|++|++.............+|...|.+++| +|+|+. |++|+.|++|++|++..+.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~--sp~g~~-l~s~s~D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAW--SPCGNY-LASASFDATTCIWKKNQDD 94 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEE--CTTSSE-EEEEETTSCEEEEEECCC-
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEE--CCCCCE-EEEEECCCcEEEEEccCCC
Confidence 6888888 8999999999999999999865433333445789999999999 999986 9999999999999997753
Q ss_pred --eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCc---eEEE
Q 011924 269 --LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGK---TIAS 342 (475)
Q Consensus 269 --~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~---~~~~ 342 (475)
++..+. |..+|. +++|+|++++|++++.|+.|++||++++. .+..
T Consensus 95 ~~~~~~~~~h~~~v~-----------------------------~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 145 (345)
T 3fm0_A 95 FECVTTLEGHENEVK-----------------------------SVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV 145 (345)
T ss_dssp EEEEEEECCCSSCEE-----------------------------EEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred eEEEEEccCCCCCce-----------------------------EEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE
Confidence 455555 778898 99999999999999999999999998764 4667
Q ss_pred eecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCC-ceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCC
Q 011924 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS-ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 421 (475)
Q Consensus 343 l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~-~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~ 421 (475)
+.+|...|.+++|+|++++|++++.|++|++||++... .+...+.+|...|++++|+|+|++|++++.|++|+||+...
T Consensus 146 ~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence 88999999999999999999999999999999997622 25678889999999999999999999999999999999632
Q ss_pred C---------------eeEEEEec-cCCCeEEEEEcCCCCeEEEEEecCCcce
Q 011924 422 G---------------YEKEQEID-FFGEISGISFSPDTESLFIGVWDRTYGS 458 (475)
Q Consensus 422 ~---------------~~~~~~~~-~~~~i~~l~fspdg~~l~~~~~D~~~~~ 458 (475)
. .++..+.+ |...|.+++|+|++..|++++.|+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~v 278 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRV 278 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEE
T ss_pred CCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEE
Confidence 1 22333444 7789999999999999999999988753
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-33 Score=268.78 Aligned_cols=267 Identities=15% Similarity=0.157 Sum_probs=204.5
Q ss_pred eEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEEEeCCCCC
Q 011924 144 DVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPG 220 (475)
Q Consensus 144 ~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~ 220 (475)
.|.. ..++.|++|+..++....+..+. ...+...|.+++| ++++|++|+.||.|++|++....
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~--------------~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~ 91 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLD--------------ETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESA 91 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEEC--------------TTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC----
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEe--------------cCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCc
Confidence 4444 45789999998765332221110 0113347999999 88999999999999999985432
Q ss_pred ----ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC----Ceeeeeee-ccccEEeccCCceEEEE
Q 011924 221 ----VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK----YQLSKHFR-FPWPVNVSSSYCIILLC 291 (475)
Q Consensus 221 ----~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~----~~~~~~~~-~~~~v~~s~~~~~l~~~ 291 (475)
...+...+.+|...|.+++| +|+|+. |++|+.|++|++||+.. .+++..+. |...|.
T Consensus 92 ~~~~~~~~~~~~~~h~~~V~~v~~--sp~g~~-las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~----------- 157 (330)
T 2hes_X 92 DRTFEMDLLAIIEGHENEVKGVAW--SNDGYY-LATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK----------- 157 (330)
T ss_dssp ---CCCEEEEEEC----CEEEEEE--CTTSCE-EEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEE-----------
T ss_pred CccccceeEEEEcCCCCcEEEEEE--CCCCCE-EEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceE-----------
Confidence 12234566789999999999 999986 99999999999999943 24455555 778888
Q ss_pred EEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCC--ceEEEeecCCCCeEEEEEecC--CCEEEEEeC
Q 011924 292 RLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTG--KTIASLCGHLDFSFASAWHPN--GVTFATGNQ 367 (475)
Q Consensus 292 ~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~--~~~~~l~~h~~~v~~~~~sp~--g~~l~t~s~ 367 (475)
+++|+|++.+|++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.+|++|+.
T Consensus 158 ------------------~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 219 (330)
T 2hes_X 158 ------------------HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD 219 (330)
T ss_dssp ------------------EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEET
T ss_pred ------------------EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeC
Confidence 9999999999999999999999998876 678899999999999999998 779999999
Q ss_pred CCeEEEEECCCCC-------ceEEEEec-CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCe--eEEEE-eccCC-Ce
Q 011924 368 DKTCRIWDLRNLS-------ESVAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY--EKEQE-IDFFG-EI 435 (475)
Q Consensus 368 dg~v~iwd~~~~~-------~~~~~~~~-~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~--~~~~~-~~~~~-~i 435 (475)
|++|++||++... .+...+.. |...|.+++|+|++ +|++++.|+.|+|||..++. ..... ..|.. .|
T Consensus 220 D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v 298 (330)
T 2hes_X 220 DSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEI 298 (330)
T ss_dssp TSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCE
T ss_pred CCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceE
Confidence 9999999986421 33445554 88899999999766 78999999999999998774 23232 45776 89
Q ss_pred EEEEEcC--CCCeEEEEEecCCcc
Q 011924 436 SGISFSP--DTESLFIGVWDRTYG 457 (475)
Q Consensus 436 ~~l~fsp--dg~~l~~~~~D~~~~ 457 (475)
.+++|+| ++++|++|+.|+++.
T Consensus 299 ~~v~~~~~~~~~~las~s~Dg~v~ 322 (330)
T 2hes_X 299 NVVKWLELNGKTILATGGDDGIVN 322 (330)
T ss_dssp EEEEEC-----CCEEEEETTSEEE
T ss_pred EEEEEecCCCceEEEEecCCCcEE
Confidence 9999999 789999999998874
No 24
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-33 Score=270.36 Aligned_cols=261 Identities=13% Similarity=0.089 Sum_probs=228.5
Q ss_pred ceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC
Q 011924 189 QTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 189 ~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
..+|++++| ++++|++|+.+|.|++|++...... ..+..|...|.+++| +|+++. |++++.|+.|++||+.+
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~h~~~v~~~~~--~~~~~~-l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERL---GTLDGHTGTIWSIDV--DCFTKY-CVTGSADYSIKLWDVSN 105 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEE---EEECCCSSCEEEEEE--CTTSSE-EEEEETTTEEEEEETTT
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhh---hhhhhcCCcEEEEEE--cCCCCE-EEEEeCCCeEEEEECCC
Confidence 457999999 8899999999999999999876544 566788999999999 999986 89999999999999999
Q ss_pred Ceeeeeeecccc---EEeccCCceEE-----------EEEEeecccceEE-----------EEee------eeeeEEECC
Q 011924 267 YQLSKHFRFPWP---VNVSSSYCIIL-----------LCRLLNFMTEKVI-----------ICLL------CLQHSSQSP 315 (475)
Q Consensus 267 ~~~~~~~~~~~~---v~~s~~~~~l~-----------~~~v~d~~~~~~~-----------~~~~------~i~~~~~sp 315 (475)
++.+..+.+..+ +.|++++..++ .+.+|+...+... .... .+.+++|+|
T Consensus 106 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (369)
T 3zwl_B 106 GQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST 185 (369)
T ss_dssp CCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG
T ss_pred CcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC
Confidence 998888875544 45889888773 5788988764311 1111 677999999
Q ss_pred CCcEEEEEeCCCcEEEEECCC-CceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceE
Q 011924 316 DGKLLIIVGDNPDGLLVDSMT-GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIR 394 (475)
Q Consensus 316 ~g~~l~~~~~dg~i~iwd~~~-~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~ 394 (475)
++++|++++.++.|++||+++ ++.+..+..|...|.+++|+|++++|++++.|+.|++||+++ .+.+..+. +...+.
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~-~~~~~~ 263 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST-LQVLKKYE-TDCPLN 263 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEE-CSSCEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC-Cceeeeec-CCCCce
Confidence 999999999999999999998 788899999999999999999999999999999999999987 67777776 667899
Q ss_pred EEEEccCCCEEEEEcCCC--------------eEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 395 SIRYTSDGRYMATAEPAD--------------FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 395 ~l~~spdg~~la~~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
.++|+|+++++++++.++ .|++||+.++..+..+..|.+.|.+++|+|++++|++++.|+.+.
T Consensus 264 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 264 TAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp EEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 999999999999999888 899999999999999999999999999999999999999998763
No 25
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.1e-33 Score=267.24 Aligned_cols=237 Identities=14% Similarity=0.157 Sum_probs=197.5
Q ss_pred cceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCC--CCeEEEEEeCCCeEEEEE
Q 011924 188 TQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFD 263 (475)
Q Consensus 188 ~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~--g~~~l~s~s~dg~v~iwd 263 (475)
+...|.+++| ++++|++|+.||.|++|++...... +...+.+|.+.|.+++| +++ ++ +|++|+.|++|++||
T Consensus 8 h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~-~~~~l~gH~~~V~~v~~--s~~~~g~-~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 8 HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK-LIDTLTGHEGPVWRVDW--AHPKFGT-ILASCSYDGKVMIWK 83 (297)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBC-CCEEECCCSSCEEEEEE--CCGGGCS-EEEEEETTTEEEEEE
T ss_pred CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcE-EEEEEccccCCeEEEEe--cCCCcCC-EEEEEcCCCEEEEEE
Confidence 3447999998 8999999999999999999753221 13566789999999999 764 66 499999999999999
Q ss_pred CCCCe--eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC--CcEEEEEeCCCcEEEEECCCCc
Q 011924 264 MGKYQ--LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD--GKLLIIVGDNPDGLLVDSMTGK 338 (475)
Q Consensus 264 ~~~~~--~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~dg~i~iwd~~~~~ 338 (475)
+.+++ .+..+. |...|. +++|+|+ |.+|++++.|+.|++||++++.
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~-----------------------------~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVN-----------------------------SVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEE-----------------------------EEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred cCCCceEEEEEeecCCCcee-----------------------------EEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 98764 333444 677888 9999997 8999999999999999998763
Q ss_pred --eEEEeecCCCCeEEEEEecC-------------CCEEEEEeCCCeEEEEECCCCCc---eEEEEecCCCceEEEEEcc
Q 011924 339 --TIASLCGHLDFSFASAWHPN-------------GVTFATGNQDKTCRIWDLRNLSE---SVAVLKGNLGAIRSIRYTS 400 (475)
Q Consensus 339 --~~~~l~~h~~~v~~~~~sp~-------------g~~l~t~s~dg~v~iwd~~~~~~---~~~~~~~~~~~v~~l~~sp 400 (475)
....+.+|...|.+++|+|+ +++|++|+.|++|+|||++.... ....+.+|...|++++|+|
T Consensus 135 ~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp 214 (297)
T 2pm7_B 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (297)
T ss_dssp CBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred ceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC
Confidence 24577899999999999996 57999999999999999976332 5677889999999999999
Q ss_pred CC---CEEEEEcCCCeEEEEECCCCe---eEEEE--eccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 401 DG---RYMATAEPADFVHVYDVKSGY---EKEQE--IDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 401 dg---~~la~~~~dg~i~iwd~~~~~---~~~~~--~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
++ ++||+++.|++|+|||+.++. ....+ ..|.+.|.+++|+|+|++|++++.|+++.
T Consensus 215 ~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~ 279 (297)
T 2pm7_B 215 TVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 279 (297)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred CCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 85 899999999999999997642 12222 35778999999999999999999999874
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.3e-32 Score=281.67 Aligned_cols=304 Identities=19% Similarity=0.308 Sum_probs=246.9
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
.+.+.+.++...|+.. .++.+.+|+.. ++... .+.+ +...|.++++ +++.|++++.++
T Consensus 224 v~~~~~s~dg~~l~~~~~d~~i~~w~~~-~~~~~--~~~~----------------~~~~v~~v~~~~d~~~l~~~~~d~ 284 (577)
T 2ymu_A 224 VRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQ--TLTG----------------HSSSVNGVAFRPDGQTIASASDDK 284 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-SCEEE--EECC----------------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEE--EEec----------------CCCCEEEEEEcCCCCEEEEEeCCC
Confidence 3555677777666664 56889999843 32222 1221 2246888988 889999999999
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccc---cEEeccCCc
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW---PVNVSSSYC 286 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~---~v~~s~~~~ 286 (475)
.|++|+... . ......+|...|.++++ +|+++. +++++.|++|++|++..........+.. .+.|+|++.
T Consensus 285 ~i~~w~~~~-~---~~~~~~~h~~~v~~~~~--~~~~~~-l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~ 357 (577)
T 2ymu_A 285 TVKLWNRNG-Q---LLQTLTGHSSSVWGVAF--SPDGQT-IASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQ 357 (577)
T ss_dssp CEEEEETTS-C---EEEEECCCSSCEEEEEE--CTTSSE-EEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEEeCCC-c---EEEEEecCCCCeEEEEE--CCCCCE-EEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCC
Confidence 999999753 2 23556788999999999 999986 8999999999999987655433333433 456899998
Q ss_pred eEE------EEEEeecccceEEEEee----eeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEe
Q 011924 287 IIL------LCRLLNFMTEKVIICLL----CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWH 356 (475)
Q Consensus 287 ~l~------~~~v~d~~~~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~s 356 (475)
.++ .+++|+.. ++.+.... .|.+++|+|+|++|++++.|+.|++||. +++.+..+.+|...|.+++|+
T Consensus 358 ~l~~~~~dg~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s 435 (577)
T 2ymu_A 358 TIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFS 435 (577)
T ss_dssp EEEEEETTSEEEEEETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEEC
T ss_pred EEEEEeCCCEEEEEcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEEC
Confidence 885 58999954 44444433 6889999999999999999999999995 678889999999999999999
Q ss_pred cCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeE
Q 011924 357 PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEIS 436 (475)
Q Consensus 357 p~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~ 436 (475)
|++++|++++.|++|++||. + ++.+..+.+|...|++++|+|+|++|++++.|+.|+||| .++..+..+.+|.+.|.
T Consensus 436 ~d~~~l~~~~~d~~v~~w~~-~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~ 512 (577)
T 2ymu_A 436 PDDQTIASASDDKTVKLWNR-N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVR 512 (577)
T ss_dssp TTSSEEEEEETTSEEEEEET-T-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEE
T ss_pred CCCCEEEEEcCCCEEEEEEC-C-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEE
Confidence 99999999999999999997 3 678889999999999999999999999999999999999 46788889999999999
Q ss_pred EEEEcCCCCeEEEEEecCCcc------eEEEEEeecc
Q 011924 437 GISFSPDTESLFIGVWDRTYG------SLLEYGRCRN 467 (475)
Q Consensus 437 ~l~fspdg~~l~~~~~D~~~~------~ll~~~~~~~ 467 (475)
+++|+|+|++|++++.|+.+. .++....+|.
T Consensus 513 ~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~ 549 (577)
T 2ymu_A 513 GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS 549 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCS
T ss_pred EEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCC
Confidence 999999999999999998764 3445455543
No 27
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-33 Score=269.42 Aligned_cols=236 Identities=16% Similarity=0.173 Sum_probs=194.3
Q ss_pred ceeEEEEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeecC-CCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC-
Q 011924 189 QTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK- 266 (475)
Q Consensus 189 ~~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~-~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~- 266 (475)
..+|.++++...+|++|+.||.|++|++.............. |...|.+++| +|+++. |++++.|++|++|++..
T Consensus 14 ~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~--sp~~~~-las~s~D~~v~iw~~~~~ 90 (330)
T 2hes_X 14 KEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW--RPHTSL-LAAGSFDSTVSIWAKEES 90 (330)
T ss_dssp SSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEE--CTTSSE-EEEEETTSCEEEEEC---
T ss_pred CCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEE--CCCCCE-EEEEeCCCcEEEEEcccC
Confidence 347999999777999999999999999986543322223234 8999999999 999985 99999999999999853
Q ss_pred ------Ceeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCC---
Q 011924 267 ------YQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMT--- 336 (475)
Q Consensus 267 ------~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~--- 336 (475)
.+.+..+. |...|. +++|+|+|++|++++.|+.|++||++.
T Consensus 91 ~~~~~~~~~~~~~~~h~~~V~-----------------------------~v~~sp~g~~las~s~D~~v~iwd~~~~~~ 141 (330)
T 2hes_X 91 ADRTFEMDLLAIIEGHENEVK-----------------------------GVAWSNDGYYLATCSRDKSVWIWETDESGE 141 (330)
T ss_dssp ----CCCEEEEEEC----CEE-----------------------------EEEECTTSCEEEEEETTSCEEEEECCTTCC
T ss_pred cCccccceeEEEEcCCCCcEE-----------------------------EEEECCCCCEEEEEeCCCEEEEEeccCCCC
Confidence 23444444 677788 999999999999999999999999953
Q ss_pred -CceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCC-CceEEEEecCCCceEEEEEccC--CCEEEEEcCCC
Q 011924 337 -GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL-SESVAVLKGNLGAIRSIRYTSD--GRYMATAEPAD 412 (475)
Q Consensus 337 -~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~-~~~~~~~~~~~~~v~~l~~spd--g~~la~~~~dg 412 (475)
.+++..+.+|...|.+++|+|++++|++++.|++|++||.+.. .+++..+.+|.+.|.+++|+|+ +.+|++|+.|+
T Consensus 142 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 142 EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 2467788999999999999999999999999999999998752 2578889999999999999998 77999999999
Q ss_pred eEEEEECCCC--------eeEEEEec-cCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 413 FVHVYDVKSG--------YEKEQEID-FFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 413 ~i~iwd~~~~--------~~~~~~~~-~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+|+|||+.++ .....+.. |...|.+++|++++ +|++++.|+++.
T Consensus 222 ~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~ 274 (330)
T 2hes_X 222 TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLA 274 (330)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEE
T ss_pred eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEE
Confidence 9999998754 23334444 88899999999765 899999999875
No 28
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.1e-33 Score=270.74 Aligned_cols=241 Identities=15% Similarity=0.107 Sum_probs=198.0
Q ss_pred cceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCce
Q 011924 133 LRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGE 210 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~ 210 (475)
+..+.|.++...+....++.|++|+..+++........ ...+...|.+++| ++++|++|+.||.
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~--------------~~~H~~~V~~v~~spdg~~l~sgs~d~~ 150 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKFC--------------KYEHDDIVSTVSVLSSGTQAVSGSKDIC 150 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEE--------------EECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeecc--------------ccCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence 45566777755444467899999999887765443321 0113347999999 8999999999999
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee---ccccEEeccCCce
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR---FPWPVNVSSSYCI 287 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~---~~~~v~~s~~~~~ 287 (475)
|++||+.+... ...+.+|...|.+++| +|++..+|++++.|++|++||+++++....+. +...+.
T Consensus 151 i~iwd~~~~~~---~~~~~~h~~~V~~~~~--~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~------- 218 (344)
T 4gqb_B 151 IKVWDLAQQVV---LSSYRAHAAQVTCVAA--SPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPT------- 218 (344)
T ss_dssp EEEEETTTTEE---EEEECCCSSCEEEEEE--CSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEE-------
T ss_pred EEEEECCCCcE---EEEEcCcCCceEEEEe--cCCCCCceeeeccccccccccccccceeeeeecceeeccce-------
Confidence 99999987543 3667789999999999 99987779999999999999999988877664 344566
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCC-CEEEEE
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNG-VTFATG 365 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g-~~l~t~ 365 (475)
+++|+| ++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++ ++||+|
T Consensus 219 ----------------------~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 219 ----------------------SLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp ----------------------EEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred ----------------------eeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 999999 56788999999999999999999999999999999999999987 689999
Q ss_pred eCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCC-EEEEEcCCCeEEEEECCCCe
Q 011924 366 NQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR-YMATAEPADFVHVYDVKSGY 423 (475)
Q Consensus 366 s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~-~la~~~~dg~i~iwd~~~~~ 423 (475)
+.|++|+|||++. ++ +..+.+|.+.|++++|+|+|+ +|++++.|++|++|++.+..
T Consensus 277 s~D~~i~vwd~~~-~~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 277 SEDCSLAVLDSSL-SE-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ETTSCEEEECTTC-CE-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred eCCCeEEEEECCC-Cc-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 9999999999975 44 456789999999999999986 67899999999999998753
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.4e-32 Score=260.01 Aligned_cols=279 Identities=15% Similarity=0.160 Sum_probs=232.7
Q ss_pred eecc-cceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEE
Q 011924 129 LHFQ-LRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAG 205 (475)
Q Consensus 129 ~h~~-lr~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg 205 (475)
.|.. ...+.|.++...++...++.+.+|+..++.....+... ....+...|.+++| ++++|++|
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~l~~~ 115 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQL-------------DCLNRDNYIRSCKLLPDGCTLIVG 115 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEE-------------ECSCTTSBEEEEEECTTSSEEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecc-------------cccCCCCcEEEEEEcCCCCEEEEE
Confidence 3443 35556888888888888999999998765432111000 00113357999999 78999999
Q ss_pred ecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccC
Q 011924 206 GFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSS 284 (475)
Q Consensus 206 ~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~ 284 (475)
+.+|.|++|++....... ......|...+.+++| +|+++. +++++.|+.|++||+.+++.+..+. +...+.
T Consensus 116 ~~d~~i~~~d~~~~~~~~-~~~~~~~~~~i~~~~~--~~~~~~-l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~---- 187 (337)
T 1gxr_A 116 GEASTLSIWDLAAPTPRI-KAELTSSAPACYALAI--SPDSKV-CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS---- 187 (337)
T ss_dssp ESSSEEEEEECCCC--EE-EEEEECSSSCEEEEEE--CTTSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEE----
T ss_pred cCCCcEEEEECCCCCcce-eeecccCCCceEEEEE--CCCCCE-EEEEeCCCcEEEEeCCCCceeeeeecccCceE----
Confidence 999999999998765332 3455678888999999 999986 8899999999999999999888877 778888
Q ss_pred CceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEE
Q 011924 285 YCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT 364 (475)
Q Consensus 285 ~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t 364 (475)
+++|+|++++|++++.++.|++||+++++.+..+. +...+.+++|+|++++|++
T Consensus 188 -------------------------~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 241 (337)
T 1gxr_A 188 -------------------------CIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAV 241 (337)
T ss_dssp -------------------------EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred -------------------------EEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEE
Confidence 99999999999999999999999999999888776 7888999999999999999
Q ss_pred EeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCC
Q 011924 365 GNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDT 444 (475)
Q Consensus 365 ~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg 444 (475)
++.++.|++||++. .+ ...+..|...|.+++|+|+|++|++++.|+.|++||+.++..+.. ..|...|.+++|+|++
T Consensus 242 ~~~~~~i~~~~~~~-~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~ 318 (337)
T 1gxr_A 242 GMESSNVEVLHVNK-PD-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDD 318 (337)
T ss_dssp EETTSCEEEEETTS-SC-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTS
T ss_pred EcCCCcEEEEECCC-CC-eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCC
Confidence 99999999999976 33 456778899999999999999999999999999999999877643 4588999999999999
Q ss_pred CeEEEEEecCCcc
Q 011924 445 ESLFIGVWDRTYG 457 (475)
Q Consensus 445 ~~l~~~~~D~~~~ 457 (475)
++|++++.|+.+.
T Consensus 319 ~~l~~~~~dg~i~ 331 (337)
T 1gxr_A 319 KYIVTGSGDKKAT 331 (337)
T ss_dssp CEEEEEETTSCEE
T ss_pred CEEEEecCCCeEE
Confidence 9999999998774
No 30
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-32 Score=267.06 Aligned_cols=232 Identities=19% Similarity=0.246 Sum_probs=202.9
Q ss_pred eeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 190 TQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 190 ~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
..|.+++| ++.+|++|+.||.|++|+....... .....|...|.+++| +|+|.. +++++.|+.+++|++...
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~---~~~~~~~~~v~~~~~--sp~g~~-lasg~~d~~i~v~~~~~~ 138 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE---HAVTMPCTWVMACAY--APSGCA-IACGGLDNKCSVYPLTFD 138 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE---EEEECSSSCCCEEEE--CTTSSE-EEEESTTSEEEEEECCCC
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcc---eEEecCCCCEEEEEE--CCCCCE-EEEeeCCCCEEEEEEecc
Confidence 46999999 8899999999999999998766544 344557778999999 999986 999999999999998643
Q ss_pred e------eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceE
Q 011924 268 Q------LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI 340 (475)
Q Consensus 268 ~------~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~ 340 (475)
. ....+. |...+. +++|+|++..|++++.|+.|++||+++++++
T Consensus 139 ~~~~~~~~~~~~~~h~~~v~-----------------------------~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~ 189 (354)
T 2pbi_B 139 KNENMAAKKKSVAMHTNYLS-----------------------------ACSFTNSDMQILTASGDGTCALWDVESGQLL 189 (354)
T ss_dssp TTCCSGGGCEEEEECSSCEE-----------------------------EEEECSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ccccccccceeeeccCCcEE-----------------------------EEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE
Confidence 1 222333 667777 9999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEEEec--CCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEE
Q 011924 341 ASLCGHLDFSFASAWHP--NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYD 418 (475)
Q Consensus 341 ~~l~~h~~~v~~~~~sp--~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd 418 (475)
..+.+|...|.+++|+| ++++|++|+.|++|++||+++ ++++..+.+|...|++++|+|+|++|++|+.|++|++||
T Consensus 190 ~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 190 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYD 268 (354)
T ss_dssp EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999988 578999999999999999987 788999999999999999999999999999999999999
Q ss_pred CCCCeeEEEEecc--CCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 419 VKSGYEKEQEIDF--FGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 419 ~~~~~~~~~~~~~--~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
++++..+..+..+ ...+.+++|+|+|++|++|+.|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~ 309 (354)
T 2pbi_B 269 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN 309 (354)
T ss_dssp TTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEE
Confidence 9998776665533 34789999999999999999998764
No 31
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.9e-31 Score=257.36 Aligned_cols=268 Identities=17% Similarity=0.233 Sum_probs=219.9
Q ss_pred ceeEEEEEE--c-CcEEEEEecCceEEEEeCCCCCc--eEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEE
Q 011924 189 QTQVSTLAV--K-DKLLVAGGFQGELICKHLDRPGV--SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFD 263 (475)
Q Consensus 189 ~~~v~~l~~--~-~~~lvsg~~dg~i~vw~~~~~~~--~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd 263 (475)
...|++|+| + +++|++|+.||+|++|++..... ..+...+.+|...|.+++| +|+|+. |++++.|+.|++|+
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~--s~dg~~-l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI--SSDGQF-ALSGSWDGTLRLWD 114 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEE--CTTSSE-EEEEETTSEEEEEE
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEE--CCCCCE-EEEEcccccceEEe
Confidence 347999999 3 68999999999999999976543 3345667889999999999 999986 99999999999999
Q ss_pred CCCCeeeeeeec----cccEEeccCCceEE------EEEEeecccceEEEEee-----eeeeEEECCC--CcEEEEEeCC
Q 011924 264 MGKYQLSKHFRF----PWPVNVSSSYCIIL------LCRLLNFMTEKVIICLL-----CLQHSSQSPD--GKLLIIVGDN 326 (475)
Q Consensus 264 ~~~~~~~~~~~~----~~~v~~s~~~~~l~------~~~v~d~~~~~~~~~~~-----~i~~~~~sp~--g~~l~~~~~d 326 (475)
............ .....+++.+..++ .+++||........... .+.+++|+++ ..++++++.|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d 194 (340)
T 4aow_A 115 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD 194 (340)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred ecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCC
Confidence 988777665552 22334667777664 47899987765544322 5678888875 4578899999
Q ss_pred CcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEE
Q 011924 327 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMA 406 (475)
Q Consensus 327 g~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la 406 (475)
+.|++||+++++.+..+.+|...|.+++|+|++++|++|+.|++|++||++. .+++..+..+ ..|.+++|+|++.+++
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~~~-~~v~~~~~~~~~~~~~ 272 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE-GKHLYTLDGG-DIINALCFSPNRYWLC 272 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TEEEEEEECS-SCEEEEEECSSSSEEE
T ss_pred CEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc-CceeeeecCC-ceEEeeecCCCCceee
Confidence 9999999999999999999999999999999999999999999999999987 7777777755 5799999999987655
Q ss_pred EEcCCCeEEEEECCCCeeEEEEe---------ccCCCeEEEEEcCCCCeEEEEEecCCcceEEEEE
Q 011924 407 TAEPADFVHVYDVKSGYEKEQEI---------DFFGEISGISFSPDTESLFIGVWDRTYGSLLEYG 463 (475)
Q Consensus 407 ~~~~dg~i~iwd~~~~~~~~~~~---------~~~~~i~~l~fspdg~~l~~~~~D~~~~~ll~~~ 463 (475)
++.|+.|+|||++++..+..+. .|...|.+++|+|+|++|++|+.|+.+. +....
T Consensus 273 -~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~-iW~~~ 336 (340)
T 4aow_A 273 -AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR-VWQVT 336 (340)
T ss_dssp -EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE-EEEEE
T ss_pred -ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE-EEeCC
Confidence 5568999999999887665543 4778999999999999999999999874 33433
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.6e-32 Score=258.31 Aligned_cols=233 Identities=15% Similarity=0.187 Sum_probs=204.8
Q ss_pred ceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC
Q 011924 189 QTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 189 ~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
...|.+++| ++++|++|+.||.|++|++...... .....|...|.+++| +|+++. |++++.|+.|++||+.+
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~---~~~~~h~~~v~~~~~--~~~~~~-l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE---KTISGHKLGISDVAW--SSDSNL-LVSASDDKTLKIWDVSS 96 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE---EEECCCSSCEEEEEE--CTTSSE-EEEEETTSEEEEEETTT
T ss_pred CCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccc---hhhccCCCceEEEEE--cCCCCE-EEEECCCCEEEEEECCC
Confidence 347999999 8899999999999999999765543 556788999999999 999986 99999999999999999
Q ss_pred Ceeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeec
Q 011924 267 YQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCG 345 (475)
Q Consensus 267 ~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~ 345 (475)
++.+..+. +...+. +++|+|++++|++++.|+.|++||+++++.+..+..
T Consensus 97 ~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 147 (312)
T 4ery_A 97 GKCLKTLKGHSNYVF-----------------------------CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 147 (312)
T ss_dssp CCEEEEEECCSSCEE-----------------------------EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CcEEEEEcCCCCCEE-----------------------------EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC
Confidence 99888887 778888 999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEe-cCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCee
Q 011924 346 HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK-GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE 424 (475)
Q Consensus 346 h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~-~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~ 424 (475)
|...|.+++|+|++++|++++.|++|++||+++ ++.+..+. .+...+..++|+|+|++|++++.|+.|++||+.++..
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 999999999999999999999999999999987 55555554 4567899999999999999999999999999999998
Q ss_pred EEEEeccCCCe---EEEEEcCCCCeEEEEEecCCcc
Q 011924 425 KEQEIDFFGEI---SGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 425 ~~~~~~~~~~i---~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+..+..|...+ ......+++.+|++|+.|+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~ 262 (312)
T 4ery_A 227 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 262 (312)
T ss_dssp EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEE
T ss_pred EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEE
Confidence 88888876543 2333446888999998888763
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7e-32 Score=286.83 Aligned_cols=264 Identities=17% Similarity=0.221 Sum_probs=221.4
Q ss_pred cceeEEEEEE---cCcEEEEEecCceEEEEeCCCCCc--eEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEE
Q 011924 188 TQTQVSTLAV---KDKLLVAGGFQGELICKHLDRPGV--SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDF 262 (475)
Q Consensus 188 ~~~~v~~l~~---~~~~lvsg~~dg~i~vw~~~~~~~--~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iw 262 (475)
|...|+++++ ++++|++|+.||+|++|++..... ..+...+.+|...|.+++| +|+++. |++|+.|++|++|
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~--s~~g~~-l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL--SSDGQF-ALSGSWDGELRLW 457 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEE--CTTSSE-EEEEETTSEEEEE
T ss_pred CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEE--CCCCCE-EEEEeCCCcEEEE
Confidence 4457999999 357999999999999999976442 2334567789999999999 999986 9999999999999
Q ss_pred ECCCCeeeeeee-cccc---EEeccCCceEE------EEEEeecccceEEEEe-------eeeeeEEECCCC--cEEEEE
Q 011924 263 DMGKYQLSKHFR-FPWP---VNVSSSYCIIL------LCRLLNFMTEKVIICL-------LCLQHSSQSPDG--KLLIIV 323 (475)
Q Consensus 263 d~~~~~~~~~~~-~~~~---v~~s~~~~~l~------~~~v~d~~~~~~~~~~-------~~i~~~~~sp~g--~~l~~~ 323 (475)
|+.+++....+. |... +.|++++..++ .+++||.......... ..|.+++|+|++ ..|+++
T Consensus 458 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 537 (694)
T 3dm0_A 458 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA 537 (694)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE
T ss_pred ECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE
Confidence 999998888776 5554 45899998885 5899998765444322 257899999986 689999
Q ss_pred eCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCC
Q 011924 324 GDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR 403 (475)
Q Consensus 324 ~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~ 403 (475)
+.|+.|++||+++++....+.+|.+.|.+++|+|++++|++|+.|++|+|||+++ ++.+..+.. ...|.+++|+|++.
T Consensus 538 s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~-~~~~~~~~~-~~~v~~~~~sp~~~ 615 (694)
T 3dm0_A 538 SWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE-GKKLYSLEA-NSVIHALCFSPNRY 615 (694)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT-TEEEECCBC-SSCEEEEEECSSSS
T ss_pred eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-CceEEEecC-CCcEEEEEEcCCCc
Confidence 9999999999999999999999999999999999999999999999999999987 676766654 45799999999999
Q ss_pred EEEEEcCCCeEEEEECCCCeeEEEEeccC-------------------CCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 404 YMATAEPADFVHVYDVKSGYEKEQEIDFF-------------------GEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 404 ~la~~~~dg~i~iwd~~~~~~~~~~~~~~-------------------~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+|++++ ++.|+|||+.++..+..+..+. ..+++++|||+|++|++|+.|+++.
T Consensus 616 ~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~ 687 (694)
T 3dm0_A 616 WLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIR 687 (694)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEE
Confidence 888776 5569999999988776654321 1378999999999999999998774
No 34
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.3e-32 Score=266.41 Aligned_cols=271 Identities=11% Similarity=0.064 Sum_probs=221.1
Q ss_pred eEEecCCCeEEE-ecCCeEEEEecCCCCc----eEEEeccCCCCCCCCCCCCccccccceeEEEEEE--c----C---cE
Q 011924 136 LVWATSKHDVYL-MSHFSVIHWSSLTSSR----SQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--K----D---KL 201 (475)
Q Consensus 136 l~~~~~~~~v~~-~~~~~v~~w~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~----~---~~ 201 (475)
+.|.+ ..++. ..++.|.+|+..+++. ..+..+.+ +..+|.+++| + + ++
T Consensus 22 ~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 22 VSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV----------------HKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC----------------CTTCEEEEEEEEEEETTTEEEEE
T ss_pred EEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEec----------------CCCcEEEEEEecccccCCccccE
Confidence 33544 44544 4578999999887761 11111111 2346899998 6 7 89
Q ss_pred EEEEecCceEEEEeCCCCCc--eEEEeeecCC-----CCceeEEEEEeC----CCCCeEEEEEeCCCeEEEEECCC----
Q 011924 202 LVAGGFQGELICKHLDRPGV--SFCSRTTYDD-----NAITNAVEIYGS----PSGAVHFTASNNDCGVRDFDMGK---- 266 (475)
Q Consensus 202 lvsg~~dg~i~vw~~~~~~~--~~~~~~~~~~-----~~~v~~l~~~~s----~~g~~~l~s~s~dg~v~iwd~~~---- 266 (475)
|++|+.+|.|++|++..... .........| ...|.+++| + |+++.+|++++.|+.|++||+.+
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW--GASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEE--ECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEE--eeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 99999999999999987664 1112344455 588999999 8 88875488889999999999987
Q ss_pred --Ceeee-----eee--------ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEE
Q 011924 267 --YQLSK-----HFR--------FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLL 331 (475)
Q Consensus 267 --~~~~~-----~~~--------~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~i 331 (475)
++.+. .+. +...+. +++|+|++ +|++++.++.|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----------------------------~~~~~~~~-~l~~~~~dg~i~i 211 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFAT-----------------------------SVDISERG-LIATGFNNGTVQI 211 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCC-----------------------------EEEECTTS-EEEEECTTSEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCce-----------------------------EEEECCCc-eEEEEeCCCcEEE
Confidence 55544 442 355566 99999999 9999999999999
Q ss_pred EECCCCceEEEeec---C---CCCeEEEEEecCCCEEEEEeCC---CeEEEEECCCCCceEEEEec-------------C
Q 011924 332 VDSMTGKTIASLCG---H---LDFSFASAWHPNGVTFATGNQD---KTCRIWDLRNLSESVAVLKG-------------N 389 (475)
Q Consensus 332 wd~~~~~~~~~l~~---h---~~~v~~~~~sp~g~~l~t~s~d---g~v~iwd~~~~~~~~~~~~~-------------~ 389 (475)
||+++++++..+.. | ...|.+++|+|++++|++++.| +.|++||+++ .+++..+.+ |
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~ 290 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAH 290 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSB
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC-CcccceeccCccccccccccccc
Confidence 99999999999998 9 9999999999999999999999 9999999987 788888988 8
Q ss_pred CCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEe------cc---------------CCCeEEEEEcCCC----
Q 011924 390 LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI------DF---------------FGEISGISFSPDT---- 444 (475)
Q Consensus 390 ~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~------~~---------------~~~i~~l~fspdg---- 444 (475)
...|.+++|+|++++|++++.|+.|+|||+.++..+..+. .| ...|.+++|+|+|
T Consensus 291 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 291 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 9999999999999999999999999999999999999988 77 8999999999999
Q ss_pred ------CeEEEEEecCCcc
Q 011924 445 ------ESLFIGVWDRTYG 457 (475)
Q Consensus 445 ------~~l~~~~~D~~~~ 457 (475)
++|++++.|+.+.
T Consensus 371 ~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 371 MGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp TTCTTSCEEEEEETTTEEE
T ss_pred ccccccceEEEecCCCcEE
Confidence 7999999998774
No 35
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.7e-32 Score=267.33 Aligned_cols=285 Identities=12% Similarity=0.035 Sum_probs=215.4
Q ss_pred cccceeEEecCCCeEEEec--------CCeEEEEecCCCCceE---EEeccCCCCCCCCCCCCccccccceeEEEEEEcC
Q 011924 131 FQLRNLVWATSKHDVYLMS--------HFSVIHWSSLTSSRSQ---VLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKD 199 (475)
Q Consensus 131 ~~lr~l~~~~~~~~v~~~~--------~~~v~~w~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 199 (475)
|++..+-|.++...|.... +++|.+|+........ +.... .+ .-..+...|.++++++
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~-~~----------~l~~~~~~v~s~~~~~ 83 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILS-EF----------ALEDNDDSPTAIDASK 83 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEE-EE----------ECCTTSCCCCEEEEET
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeee-EE----------EccCCCCceEEEEeCC
Confidence 4455666777766665532 2468899865543311 10000 00 0001223577889988
Q ss_pred cEEEEEe-----------cCceEEEEeCCCCCceEEEe----e--ecCCCCceeEEEEEeCCCCCeEE-EEEeCCCeEEE
Q 011924 200 KLLVAGG-----------FQGELICKHLDRPGVSFCSR----T--TYDDNAITNAVEIYGSPSGAVHF-TASNNDCGVRD 261 (475)
Q Consensus 200 ~~lvsg~-----------~dg~i~vw~~~~~~~~~~~~----~--~~~~~~~v~~l~~~~s~~g~~~l-~s~s~dg~v~i 261 (475)
+.+++|. .++.+++|++.......... . ...+...+.+++| ||+|+.++ ++++.|++|++
T Consensus 84 ~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f--SpDg~~la~as~~~d~~i~i 161 (365)
T 4h5i_A 84 GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYI--SREGTVAAIASSKVPAIMRI 161 (365)
T ss_dssp TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEE--CTTSSCEEEEESCSSCEEEE
T ss_pred CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEE--cCCCCEEEEEECCCCCEEEE
Confidence 8888764 46789999987654332111 1 1223445788888 99999743 34557999999
Q ss_pred EECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEE
Q 011924 262 FDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIA 341 (475)
Q Consensus 262 wd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~ 341 (475)
||+.+++.+..+.+...|. +++|+|+|+++++++.+ .+.+|+..+++.+.
T Consensus 162 wd~~~~~~~~~~~~~~~V~-----------------------------~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 162 IDPSDLTEKFEIETRGEVK-----------------------------DLHFSTDGKVVAYITGS-SLEVISTVTGSCIA 211 (365)
T ss_dssp EETTTTEEEEEEECSSCCC-----------------------------EEEECTTSSEEEEECSS-CEEEEETTTCCEEE
T ss_pred eECCCCcEEEEeCCCCceE-----------------------------EEEEccCCceEEeccce-eEEEEEeccCccee
Confidence 9999999999998888899 99999999999999855 57777777777654
Q ss_pred E--eecCCCCeEEEEEecCCCEEEEEeCCC----eEEEEECCCCCc---eEEEEecCCCceEEEEEccCCCEEEEEcCCC
Q 011924 342 S--LCGHLDFSFASAWHPNGVTFATGNQDK----TCRIWDLRNLSE---SVAVLKGNLGAIRSIRYTSDGRYMATAEPAD 412 (475)
Q Consensus 342 ~--l~~h~~~v~~~~~sp~g~~l~t~s~dg----~v~iwd~~~~~~---~~~~~~~~~~~v~~l~~spdg~~la~~~~dg 412 (475)
. ..+|...+.+++|+|+++++++++.|+ ++++|++..... ....+.+|..+|++++|+|+|++||+|+.|+
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 3 456888999999999999999999887 689999865322 2456778889999999999999999999999
Q ss_pred eEEEEECCCCeeEEEE-eccCCCeEEEEEcCCCCeEEEEEecCCcce
Q 011924 413 FVHVYDVKSGYEKEQE-IDFFGEISGISFSPDTESLFIGVWDRTYGS 458 (475)
Q Consensus 413 ~i~iwd~~~~~~~~~~-~~~~~~i~~l~fspdg~~l~~~~~D~~~~~ 458 (475)
.|+|||+++++++..+ .+|.+.|++++|||||++|++|+.|++++.
T Consensus 292 ~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 292 SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 9999999999988876 579999999999999999999999998853
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.6e-33 Score=268.09 Aligned_cols=237 Identities=13% Similarity=0.104 Sum_probs=197.8
Q ss_pred cceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCC--CCeEEEEEeCCCeEEEEE
Q 011924 188 TQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFD 263 (475)
Q Consensus 188 ~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~--g~~~l~s~s~dg~v~iwd 263 (475)
+...|.+++| ++++|++|+.||+|++|++..... .+...+.+|.+.|.+++| +++ ++. |++|+.|++|++||
T Consensus 12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-~~~~~l~gH~~~V~~v~~--~~~~~~~~-l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-ILIADLRGHEGPVWQVAW--AHPMYGNI-LASCSYDRKVIIWR 87 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-EEEEEEECCSSCEEEEEE--CCGGGSSC-EEEEETTSCEEEEC
T ss_pred ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-EEEEEEcCCCccEEEEEe--CCCCCCCE-EEEEECCCEEEEEE
Confidence 3457999999 899999999999999999976542 224566789999999999 763 665 99999999999999
Q ss_pred CCCCe--eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC--CcEEEEEeCCCcEEEEECCCCc
Q 011924 264 MGKYQ--LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD--GKLLIIVGDNPDGLLVDSMTGK 338 (475)
Q Consensus 264 ~~~~~--~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~dg~i~iwd~~~~~ 338 (475)
+++++ ....+. |...|. +++|+|+ +.+|++++.|+.|++||++.+.
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~-----------------------------~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVN-----------------------------SVCWAPHDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCC-----------------------------EEEECCTTTCSCEEEECSSSCEEEEEECSSS
T ss_pred CCCCcceEEEEccCCCCceE-----------------------------EEEECCCCCCcEEEEEcCCCCEEEEecCCCC
Confidence 98764 344444 777888 9999997 8899999999999999998764
Q ss_pred e---EEEeecCCCCeEEEEEecC-----------------CCEEEEEeCCCeEEEEECCCCC--ceEEEEecCCCceEEE
Q 011924 339 T---IASLCGHLDFSFASAWHPN-----------------GVTFATGNQDKTCRIWDLRNLS--ESVAVLKGNLGAIRSI 396 (475)
Q Consensus 339 ~---~~~l~~h~~~v~~~~~sp~-----------------g~~l~t~s~dg~v~iwd~~~~~--~~~~~~~~~~~~v~~l 396 (475)
. ...+.+|...+.+++|+|+ +++|++|+.|++|++||++... .++..+.+|...|+++
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v 218 (316)
T 3bg1_A 139 QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV 218 (316)
T ss_dssp CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEE
T ss_pred CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEE
Confidence 2 3455689999999999997 4789999999999999997532 4677788999999999
Q ss_pred EEccCC----CEEEEEcCCCeEEEEECCCC---e-eEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 397 RYTSDG----RYMATAEPADFVHVYDVKSG---Y-EKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 397 ~~spdg----~~la~~~~dg~i~iwd~~~~---~-~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+|+|++ ++||+++.|++|+||++.+. . ....+..|.+.|.+++|+|+|++|++++.|+++.
T Consensus 219 ~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 219 AWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp ECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred EecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 999987 89999999999999998762 1 2234556889999999999999999999999875
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.2e-32 Score=270.37 Aligned_cols=294 Identities=10% Similarity=0.060 Sum_probs=232.5
Q ss_pred eeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEE-EE--cCcEEEEEecCce
Q 011924 135 NLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL-AV--KDKLLVAGGFQGE 210 (475)
Q Consensus 135 ~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l-~~--~~~~lvsg~~dg~ 210 (475)
.+.|.++...+++. .++.+.+|+..+++.... .....+.++ .+ ++++|++|+.+|.
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~~~~~dg~ 120 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKM--------------------LKRADYTAVDTAKLQMRRFILGTTEGD 120 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEETTTT--------------------SCSCCEEEEEEECSSSCEEEEEETTSC
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccceeeE--------------------EecCCceEEEEEecCCCEEEEEECCCC
Confidence 45566666666664 578999999765433211 011123333 33 8999999999999
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-cccc---EEeccCCc
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWP---VNVSSSYC 286 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~---v~~s~~~~ 286 (475)
|++|++..... ...+..|...|.+++| +|+++. |++++.|++|++||+.+++.+..+. |... +.|+|++.
T Consensus 121 i~iwd~~~~~~---~~~~~~h~~~v~~~~~--~~~~~~-l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 194 (420)
T 3vl1_A 121 IKVLDSNFNLQ---REIDQAHVSEITKLKF--FPSGEA-LISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGR 194 (420)
T ss_dssp EEEECTTSCEE---EEETTSSSSCEEEEEE--CTTSSE-EEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTT
T ss_pred EEEEeCCCcce---eeecccccCccEEEEE--CCCCCE-EEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCC
Confidence 99999875433 3566789999999999 999985 9999999999999999988887776 5444 55899998
Q ss_pred eEE------EEEEeecccceEEEEee----------------------------eeeeEEECCCCcEEEEEeCCCcEEEE
Q 011924 287 IIL------LCRLLNFMTEKVIICLL----------------------------CLQHSSQSPDGKLLIIVGDNPDGLLV 332 (475)
Q Consensus 287 ~l~------~~~v~d~~~~~~~~~~~----------------------------~i~~~~~sp~g~~l~~~~~dg~i~iw 332 (475)
.++ .+++||..+++...... .+.+++|+|++++|++++.+|.|++|
T Consensus 195 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 274 (420)
T 3vl1_A 195 NVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH 274 (420)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred EEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence 885 58999999988776653 23456678999999999999999999
Q ss_pred ECCCCceEEEee-cCCCCeEEEEEecCCC-EEEEEeCCCeEEEEECCCCCceEEEEec-CCCceEEEEEccCCCEEEEEc
Q 011924 333 DSMTGKTIASLC-GHLDFSFASAWHPNGV-TFATGNQDKTCRIWDLRNLSESVAVLKG-NLGAIRSIRYTSDGRYMATAE 409 (475)
Q Consensus 333 d~~~~~~~~~l~-~h~~~v~~~~~sp~g~-~l~t~s~dg~v~iwd~~~~~~~~~~~~~-~~~~v~~l~~spdg~~la~~~ 409 (475)
|+++++.+..+. +|...|.+++|+|++. +|++|+.||+|++||+++...++..+.. +...|+++. .|++++|++++
T Consensus 275 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~ 353 (420)
T 3vl1_A 275 NVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGALFVSSG 353 (420)
T ss_dssp ETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEEEEEET
T ss_pred ECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCEEEEec
Confidence 999998877765 4889999999999998 9999999999999999886566777777 566777775 56788999999
Q ss_pred CCCeEEEEECCCCe---------eEEEEeccCCCeEEEEEcCCCC---eEEEEEecCC
Q 011924 410 PADFVHVYDVKSGY---------EKEQEIDFFGEISGISFSPDTE---SLFIGVWDRT 455 (475)
Q Consensus 410 ~dg~i~iwd~~~~~---------~~~~~~~~~~~i~~l~fspdg~---~l~~~~~D~~ 455 (475)
.|+.|++|++.... ....+..|.+.|.+++|+|+++ .|++++.++.
T Consensus 354 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~ 411 (420)
T 3vl1_A 354 FDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNF 411 (420)
T ss_dssp TTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTE
T ss_pred CCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCce
Confidence 99999999987632 2234556788999999999999 6777776654
No 38
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-32 Score=267.38 Aligned_cols=263 Identities=13% Similarity=0.122 Sum_probs=217.0
Q ss_pred EEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--c----CcEEEEEecCceEEEEeCCC
Q 011924 145 VYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--K----DKLLVAGGFQGELICKHLDR 218 (475)
Q Consensus 145 v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~----~~~lvsg~~dg~i~vw~~~~ 218 (475)
+....++.|.+|+..+++....+.... ...+...|.+++| + +.+|++|+.+|.|++|++..
T Consensus 38 ~~~~~~~~v~vw~~~~~~~~~~~~~~~-------------~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 104 (366)
T 3k26_A 38 FATVGSNRVTLYECHSQGEIRLLQSYV-------------DADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT 104 (366)
T ss_dssp EEEEETTEEEEEEECGGGCEEEEEEEE-------------CSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT
T ss_pred EEECCCCEEEEEEcCCCcEEEeeeecc-------------ccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh
Confidence 333567899999988766544433210 0113346889988 4 57999999999999999987
Q ss_pred CCceEEEeeecCCCCceeEEEEEeCC-CCCeEEEEEeCCCeEEEEECCCCeeeeee----eccccEEeccCCceEEEEEE
Q 011924 219 PGVSFCSRTTYDDNAITNAVEIYGSP-SGAVHFTASNNDCGVRDFDMGKYQLSKHF----RFPWPVNVSSSYCIILLCRL 293 (475)
Q Consensus 219 ~~~~~~~~~~~~~~~~v~~l~~~~s~-~g~~~l~s~s~dg~v~iwd~~~~~~~~~~----~~~~~v~~s~~~~~l~~~~v 293 (475)
.... ..+..|...|.+++| +| ++.. |++++.|+.|++||+.+++.+..+ .+...+.
T Consensus 105 ~~~~---~~~~~~~~~i~~~~~--~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~------------- 165 (366)
T 3k26_A 105 MQCI---KHYVGHGNAINELKF--HPRDPNL-LLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL------------- 165 (366)
T ss_dssp CCEE---EEEESCCSCEEEEEE--CSSCTTE-EEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEE-------------
T ss_pred ceEe---eeecCCCCcEEEEEE--CCCCCCE-EEEEeCCCeEEEEEeecCeEEEEecccccccCcee-------------
Confidence 6544 455678999999999 99 7764 999999999999999999988887 3778888
Q ss_pred eecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEee----------------------------c
Q 011924 294 LNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC----------------------------G 345 (475)
Q Consensus 294 ~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~----------------------------~ 345 (475)
+++|+|++++|++++.|+.|++||+++++.+..+. +
T Consensus 166 ----------------~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T 3k26_A 166 ----------------SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI 229 (366)
T ss_dssp ----------------EEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS
T ss_pred ----------------EEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccC
Confidence 99999999999999999999999999876543333 3
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCC-------------ceEEEEecCCCceEEEEEccC--CCEEEEEcC
Q 011924 346 HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS-------------ESVAVLKGNLGAIRSIRYTSD--GRYMATAEP 410 (475)
Q Consensus 346 h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~-------------~~~~~~~~~~~~v~~l~~spd--g~~la~~~~ 410 (475)
|...|.+++|+ +++|++++.|+.|++||+++.. ..+..+..|...|++++|+|+ |++|++++.
T Consensus 230 ~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~ 307 (366)
T 3k26_A 230 HRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ 307 (366)
T ss_dssp CSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT
T ss_pred CcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec
Confidence 99999999998 7899999999999999997632 247788889999999999999 999999999
Q ss_pred CCeEEEEECCCCee----EEEEecc--CCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 411 ADFVHVYDVKSGYE----KEQEIDF--FGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 411 dg~i~iwd~~~~~~----~~~~~~~--~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
||.|++||+.++.. ...+..| .+.|.+++|+|++++|++++.|+.+.
T Consensus 308 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 360 (366)
T 3k26_A 308 VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIW 360 (366)
T ss_dssp TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEE
Confidence 99999999998753 3356666 68999999999999999999998764
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.9e-33 Score=273.59 Aligned_cols=233 Identities=21% Similarity=0.292 Sum_probs=201.8
Q ss_pred eeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 190 TQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 190 ~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
..|++++| ++++|++|+.||+|++|++.+.... ..+..|...|.+++| +|+|+. +++|+.|+.|++|++.+.
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~---~~~~~h~~~v~~~~~--s~~g~~-las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKT---HAIKLHCPWVMECAF--APNGQS-VACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEE---EEEECCCTTCCCCEE--CTTSSE-EEECCSSSCCEEEECCCC
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccc---eEEecCCCCEEEEEE--CCCCCE-EEEeeCCCcEEEEECCCC
Confidence 47999999 8899999999999999998765543 556678889999999 999986 999999999999999653
Q ss_pred e-------eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC-CcEEEEEeCCCcEEEEECCCCc
Q 011924 268 Q-------LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD-GKLLIIVGDNPDGLLVDSMTGK 338 (475)
Q Consensus 268 ~-------~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~ 338 (475)
. ....+. |...+. +++|+|+ +..|++++.|+.|++||+++++
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~-----------------------------~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~ 191 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYAS-----------------------------SCQYVPDQETRLITGSGDQTCVLWDVTTGQ 191 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCC-----------------------------CCBCCSSSSSCEEEECTTSCEEEECTTTCC
T ss_pred ccccCCccceeeccCCCcceE-----------------------------EEEEecCCCCEEEEECCCCcEEEEEcCCCc
Confidence 2 122232 566666 8889996 5679999999999999999999
Q ss_pred eEEEe-----ecCCCCeEEEEEec-CCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCC
Q 011924 339 TIASL-----CGHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD 412 (475)
Q Consensus 339 ~~~~l-----~~h~~~v~~~~~sp-~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg 412 (475)
.+..+ .+|...|.+++|+| ++++|++|+.|++|++||++....++..+.+|.+.|.+++|+|+|++|++|+.|+
T Consensus 192 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 271 (380)
T 3iz6_a 192 RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDG 271 (380)
T ss_dssp EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSS
T ss_pred EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCC
Confidence 98887 67999999999987 8999999999999999999866788999999999999999999999999999999
Q ss_pred eEEEEECCCCeeEEEEeccC-------CCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 413 FVHVYDVKSGYEKEQEIDFF-------GEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 413 ~i~iwd~~~~~~~~~~~~~~-------~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+|+|||++++..+..+..+. ..|.+++|+|+|++|++|+.|+.+.
T Consensus 272 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 272 TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 99999999998887765533 2489999999999999998888764
No 40
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.8e-32 Score=262.18 Aligned_cols=274 Identities=14% Similarity=0.140 Sum_probs=219.6
Q ss_pred cceeEEecCCCeEEEec-----CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--c---CcEE
Q 011924 133 LRNLVWATSKHDVYLMS-----HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--K---DKLL 202 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~-----~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~---~~~l 202 (475)
+..+.|.+....++... ++.|.+|+..+++........ +..+|.+++| + +++|
T Consensus 21 v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 21 VFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIE-----------------KAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp EEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEE-----------------ESSCEEEEECTTCCTTTCCE
T ss_pred eEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeec-----------------ccCcEEEEEEcCCCCCCceE
Confidence 34555777676666554 789999998877654433221 2347999999 4 6999
Q ss_pred EEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEE----eCCCCCeEEEEEeCCCeEEEEECCCCe-eeeeee-cc
Q 011924 203 VAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIY----GSPSGAVHFTASNNDCGVRDFDMGKYQ-LSKHFR-FP 276 (475)
Q Consensus 203 vsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~----~s~~g~~~l~s~s~dg~v~iwd~~~~~-~~~~~~-~~ 276 (475)
++|+.+|.|++|++...... ...+..|...|.++.|. ++|+++. |++++.|+.|++||+.+++ .+..+. +.
T Consensus 84 ~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~s~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEAPEMP--VYSVKGHKEIINAIDGIGGLGIGEGAPE-IVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp EEEETTSCEEEECTTSCSSC--SEEECCCSSCEEEEEEESGGGCC-CCCE-EEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred EEecCCCeEEEEeCCCCCcc--EEEEEecccceEEEeeccccccCCCccE-EEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence 99999999999999876622 24566899999999763 3788886 8999999999999998876 555554 22
Q ss_pred ----ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEE----ECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCC
Q 011924 277 ----WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSS----QSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLD 348 (475)
Q Consensus 277 ----~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~----~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~ 348 (475)
..+. +++ |+|++++|++++.++.|++||+++++.... ..|..
T Consensus 161 ~~~~~~v~-----------------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~ 210 (357)
T 3i2n_A 161 GENKRDCW-----------------------------TVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKN 210 (357)
T ss_dssp TSCCCCEE-----------------------------EEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSS
T ss_pred CCCCCceE-----------------------------EEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCC
Confidence 2555 666 789999999999999999999999887544 56889
Q ss_pred CeEEEEEec---CCCEEEEEeCCCeEEEEECCCCCceEE-----EEecCCCceEEEEEccCCC-EEEEEcCCCeEEEEEC
Q 011924 349 FSFASAWHP---NGVTFATGNQDKTCRIWDLRNLSESVA-----VLKGNLGAIRSIRYTSDGR-YMATAEPADFVHVYDV 419 (475)
Q Consensus 349 ~v~~~~~sp---~g~~l~t~s~dg~v~iwd~~~~~~~~~-----~~~~~~~~v~~l~~spdg~-~la~~~~dg~i~iwd~ 419 (475)
.|.+++|+| ++.+|++++.|+.|++||++. ..++. .+.+|...|++++|+|+++ +|++++.||.|++||+
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 289 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKY 289 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeec
Confidence 999999999 999999999999999999976 44333 3348999999999999998 8999999999999998
Q ss_pred CCC-------------------eeEEEEeccCCCeEEEEEcCCCCeEE-EEEecCCcc
Q 011924 420 KSG-------------------YEKEQEIDFFGEISGISFSPDTESLF-IGVWDRTYG 457 (475)
Q Consensus 420 ~~~-------------------~~~~~~~~~~~~i~~l~fspdg~~l~-~~~~D~~~~ 457 (475)
.++ ..+..+..|.+.|.+++|+|+|++|+ +++.|+.+.
T Consensus 290 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 290 EYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp ECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 754 35667778999999999999999999 788897663
No 41
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.6e-31 Score=261.62 Aligned_cols=266 Identities=16% Similarity=0.232 Sum_probs=223.6
Q ss_pred eEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEE
Q 011924 136 LVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELIC 213 (475)
Q Consensus 136 l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~v 213 (475)
+-|++ .+.|....++.|++|+..+++...++.+.+| ...|++|+| +|++|++|+.||.|++
T Consensus 111 l~wS~-~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~----------------~~~V~sv~fspdg~~lasgs~Dg~v~i 173 (420)
T 4gga_A 111 VDWSS-GNVLAVALDNSVYLWSASSGDILQLLQMEQP----------------GEYISSVAWIKEGNYLAVGTSSAEVQL 173 (420)
T ss_dssp EEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCST----------------TCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEECC-CCEEEEEeCCEEEEEECCCCCEEEEEEecCC----------------CCcEEEEEECCCCCEEEEEECCCeEEE
Confidence 34764 5677777899999999999988777665432 246999999 8999999999999999
Q ss_pred EeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC-eeeeeee-ccccEEeccCCceEEEE
Q 011924 214 KHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-QLSKHFR-FPWPVNVSSSYCIILLC 291 (475)
Q Consensus 214 w~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~-~~~~~~~-~~~~v~~s~~~~~l~~~ 291 (475)
|++...... ....+|...+.++.+ ++. ++++|+.|+.+++|+.... ..+..+. +...+.
T Consensus 174 Wd~~~~~~~---~~~~~h~~~v~~~s~----~~~-~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~----------- 234 (420)
T 4gga_A 174 WDVQQQKRL---RNMTSHSARVGSLSW----NSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVC----------- 234 (420)
T ss_dssp EETTTTEEE---EEECCCSSCEEEEEE----ETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE-----------
T ss_pred EEcCCCcEE---EEEeCCCCceEEEee----CCC-EEEEEeCCCceeEeeecccceeeEEeccccccee-----------
Confidence 999875543 566788989988877 445 4999999999999998764 3444454 777888
Q ss_pred EEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCc----eEEEeecCCCCeEEEEEecC-CCEEEEE-
Q 011924 292 RLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGK----TIASLCGHLDFSFASAWHPN-GVTFATG- 365 (475)
Q Consensus 292 ~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~----~~~~l~~h~~~v~~~~~sp~-g~~l~t~- 365 (475)
.+.++|+++++++++.|+.+++|+..+++ .+.....|...|.+++|+|. +.+++++
T Consensus 235 ------------------~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~ 296 (420)
T 4gga_A 235 ------------------GLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 296 (420)
T ss_dssp ------------------EEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEE
T ss_pred ------------------eeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEe
Confidence 99999999999999999999999998765 35677789999999999995 4566654
Q ss_pred -eCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc--CCCeEEEEECCCCeeEEEEeccCCCeEEEEEcC
Q 011924 366 -NQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE--PADFVHVYDVKSGYEKEQEIDFFGEISGISFSP 442 (475)
Q Consensus 366 -s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~--~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fsp 442 (475)
+.|++|++||+++ +.++..+..+ ..+.++.|+|+++.|++++ .|+.|+|||+.++.++..+.+|.+.|.+++|+|
T Consensus 297 gs~D~~I~iwd~~t-~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp 374 (420)
T 4gga_A 297 GTSDRHIRIWNVCS-GACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP 374 (420)
T ss_dssp CTTTCEEEEEETTT-TEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred ecCCCEEEEEeCCc-cccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 5799999999987 7777777765 4788999999999888765 689999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCcc
Q 011924 443 DTESLFIGVWDRTYG 457 (475)
Q Consensus 443 dg~~l~~~~~D~~~~ 457 (475)
+|++|++|+.|++++
T Consensus 375 dg~~l~S~s~D~tvr 389 (420)
T 4gga_A 375 DGATVASAAADETLR 389 (420)
T ss_dssp TSSCEEEEETTTEEE
T ss_pred CCCEEEEEecCCeEE
Confidence 999999999999875
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.1e-32 Score=267.30 Aligned_cols=243 Identities=15% Similarity=0.105 Sum_probs=193.3
Q ss_pred cceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCce
Q 011924 133 LRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGE 210 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~ 210 (475)
...+.|.++...+....++.|++|+..+++...+..+ ....+...|.+++| ++++|++|+.+|.
T Consensus 97 V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~--------------~~~~h~~~V~~v~~spdg~~l~sgs~dg~ 162 (357)
T 4g56_B 97 VTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKF--------------AKYEHDDIVKTLSVFSDGTQAVSGGKDFS 162 (357)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEC--------CCCCE--------------EECCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred EEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEee--------------ccCCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence 4556688877666667789999999877654322111 11123457999999 8899999999999
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee---ccccEEeccCCce
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR---FPWPVNVSSSYCI 287 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~---~~~~v~~s~~~~~ 287 (475)
|++|++.+.... ..+..|...|++++| +|++..++++++.|++|++||+++++....+. +...+.
T Consensus 163 v~iwd~~~~~~~---~~~~~h~~~v~~v~~--s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~------- 230 (357)
T 4g56_B 163 VKVWDLSQKAVL---KSYNAHSSEVNCVAA--CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPT------- 230 (357)
T ss_dssp EEEEETTTTEEE---EEECCCSSCEEEEEE--CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEE-------
T ss_pred EEEEECCCCcEE---EEEcCCCCCEEEEEE--ccCCCceeeeeccCCceEEEECCCCceeeeeeecccccccc-------
Confidence 999999875443 566789999999999 99987669999999999999999887766554 455677
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECCC-CcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCC-CEEEEE
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNG-VTFATG 365 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g-~~l~t~ 365 (475)
+++|+|+ +.+|++|+.|+.|++||+++++++..+.+|...|.+++|+|++ ++||+|
T Consensus 231 ----------------------~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasg 288 (357)
T 4g56_B 231 ----------------------SVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASI 288 (357)
T ss_dssp ----------------------EEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEE
T ss_pred ----------------------chhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEE
Confidence 9999996 5788999999999999999999999999999999999999987 689999
Q ss_pred eCCCeEEEEECCCCCceEEEEecCCCceEEEEEcc-CCCEEEEEcCCCeEEEEECCCCeeE
Q 011924 366 NQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTS-DGRYMATAEPADFVHVYDVKSGYEK 425 (475)
Q Consensus 366 s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~la~~~~dg~i~iwd~~~~~~~ 425 (475)
+.|++|+|||++. ++++.. .+|.+.|++++|+| ++++|++++.|+.|++|++.+....
T Consensus 289 s~D~~i~iwd~~~-~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 289 SEDCTVAVLDADF-SEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp ETTSCEEEECTTS-CEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred eCCCEEEEEECCC-CcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 9999999999976 565554 47999999999999 8999999999999999999764433
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-31 Score=264.38 Aligned_cols=233 Identities=17% Similarity=0.222 Sum_probs=196.6
Q ss_pred eeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeee---------------cCCCCceeEEEEEeCCCCCeEEEE
Q 011924 190 TQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTT---------------YDDNAITNAVEIYGSPSGAVHFTA 252 (475)
Q Consensus 190 ~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~---------------~~~~~~v~~l~~~~s~~g~~~l~s 252 (475)
..|.+++| +|++|++|+ ++.+++|++............ ..+...|.+++| +|+|+. |++
T Consensus 65 ~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~--s~dg~~-l~s 140 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF--SPDGKF-LAT 140 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEE--CTTSSE-EEE
T ss_pred CEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEE--CCCCCE-EEE
Confidence 46888988 899999876 789999999876543211100 012234889999 999986 999
Q ss_pred EeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEE
Q 011924 253 SNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLL 331 (475)
Q Consensus 253 ~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~i 331 (475)
|+.|++|++||+.+++.+..+. |...|. +++|+|++++|++++.|+.|++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~-----------------------------~~~~~p~~~~l~s~s~d~~v~i 191 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIY-----------------------------SLDYFPSGDKLVSGSGDRTVRI 191 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEE-----------------------------EEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEE-----------------------------EEEEcCCCCEEEEecCCCcEEE
Confidence 9999999999999999888877 788899 9999999999999999999999
Q ss_pred EECCCCceEEEeecCCCCeEEEEEec-CCCEEEEEeCCCeEEEEECCCCCceEEEE-------ecCCCceEEEEEccCCC
Q 011924 332 VDSMTGKTIASLCGHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVL-------KGNLGAIRSIRYTSDGR 403 (475)
Q Consensus 332 wd~~~~~~~~~l~~h~~~v~~~~~sp-~g~~l~t~s~dg~v~iwd~~~~~~~~~~~-------~~~~~~v~~l~~spdg~ 403 (475)
||+++++....+. +...+.+++|+| ++++|++|+.|++|++||+++ +..+..+ .+|...|.+++|+|+|+
T Consensus 192 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~ 269 (393)
T 1erj_A 192 WDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQ 269 (393)
T ss_dssp EETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSS
T ss_pred EECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCC
Confidence 9999999888776 567899999999 999999999999999999987 6666665 56888999999999999
Q ss_pred EEEEEcCCCeEEEEECCCC------------eeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 404 YMATAEPADFVHVYDVKSG------------YEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 404 ~la~~~~dg~i~iwd~~~~------------~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+|++|+.|+.|++||+.+. .+...+.+|...|.+++|+|++++|++|+.|+++.
T Consensus 270 ~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~ 335 (393)
T 1erj_A 270 SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVL 335 (393)
T ss_dssp EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEE
T ss_pred EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 9999999999999999753 34556778999999999999999999999887653
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.8e-31 Score=259.53 Aligned_cols=260 Identities=15% Similarity=0.146 Sum_probs=218.9
Q ss_pred CCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEEEeCCCC
Q 011924 142 KHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRP 219 (475)
Q Consensus 142 ~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~ 219 (475)
...+....++.|.+|+..+++....+... +...|.+++| ++++|++|+.+|.|++|++...
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~-----------------~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETD-----------------ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECC-----------------TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecC-----------------CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 44555567899999999888766554331 3347999999 8899999999999999999876
Q ss_pred CceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC-Ceeeeeee-ccccEEeccCCceEEEEEEeecc
Q 011924 220 GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQLSKHFR-FPWPVNVSSSYCIILLCRLLNFM 297 (475)
Q Consensus 220 ~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~-~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~ 297 (475)
... ..+..|...|.+++| + +. ++++++.|+.|++||+.. ...+..+. +...+.
T Consensus 167 ~~~---~~~~~~~~~v~~~~~--~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~----------------- 221 (401)
T 4aez_A 167 TKL---RTMAGHQARVGCLSW--N--RH-VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC----------------- 221 (401)
T ss_dssp CEE---EEECCCSSCEEEEEE--E--TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE-----------------
T ss_pred eEE---EEecCCCCceEEEEE--C--CC-EEEEEcCCCCEEEEecccCcceeeEEcCCCCCee-----------------
Confidence 544 555689999999998 4 44 499999999999999984 55555555 788888
Q ss_pred cceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCC-CEEEEEe--CCCeEEEE
Q 011924 298 TEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNG-VTFATGN--QDKTCRIW 374 (475)
Q Consensus 298 ~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g-~~l~t~s--~dg~v~iw 374 (475)
+++|+|++++|++++.|+.|++||+++++++..+.+|...|.+++|+|++ .++++++ .|++|++|
T Consensus 222 ------------~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 222 ------------GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp ------------EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred ------------EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999965 5666665 79999999
Q ss_pred ECCCCCceEEEEecCCCceEEEEEccCCCEEEE--EcCCCeEEEEECCCCeeEE--EEeccCCCeEEEEEcCCCCeEEEE
Q 011924 375 DLRNLSESVAVLKGNLGAIRSIRYTSDGRYMAT--AEPADFVHVYDVKSGYEKE--QEIDFFGEISGISFSPDTESLFIG 450 (475)
Q Consensus 375 d~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~--~~~dg~i~iwd~~~~~~~~--~~~~~~~~i~~l~fspdg~~l~~~ 450 (475)
|+++ ++++..+. +...|.+++|+|+|++|++ |+.++.|+|||+.++.... .+..|.+.|.+++|+|+|++|+++
T Consensus 290 d~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 367 (401)
T 4aez_A 290 NAAT-GARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTA 367 (401)
T ss_dssp ETTT-CCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEE
T ss_pred ECCC-CCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 9987 67777776 4568999999999999999 4489999999999865444 356899999999999999999999
Q ss_pred EecCCcc
Q 011924 451 VWDRTYG 457 (475)
Q Consensus 451 ~~D~~~~ 457 (475)
+.|+.+.
T Consensus 368 ~~dg~i~ 374 (401)
T 4aez_A 368 ASDENLK 374 (401)
T ss_dssp CTTSEEE
T ss_pred eCCCcEE
Confidence 9998763
No 45
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=272.96 Aligned_cols=261 Identities=15% Similarity=0.177 Sum_probs=219.3
Q ss_pred cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCce-EEE
Q 011924 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVS-FCS 225 (475)
Q Consensus 149 ~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~-~~~ 225 (475)
.++.|.+|+..++.....+ ....+...|.+++| ++++|++|+.+|.|++|++...... ...
T Consensus 43 ~d~~v~iw~~~~~~~~~~~----------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~ 106 (416)
T 2pm9_A 43 TDSSLELWSLLAADSEKPI----------------ASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSM 106 (416)
T ss_dssp CCCCCEEEESSSGGGCSCS----------------CCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEE
T ss_pred CCCeEEEEEccCCCCCcEE----------------EEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccch
Confidence 3578999998765432110 00113357999999 8899999999999999999863211 134
Q ss_pred eeecCCCCceeEEEEEeCCC-CCeEEEEEeCCCeEEEEECCCCe------eeeee----eccccEEeccCCceEEEEEEe
Q 011924 226 RTTYDDNAITNAVEIYGSPS-GAVHFTASNNDCGVRDFDMGKYQ------LSKHF----RFPWPVNVSSSYCIILLCRLL 294 (475)
Q Consensus 226 ~~~~~~~~~v~~l~~~~s~~-g~~~l~s~s~dg~v~iwd~~~~~------~~~~~----~~~~~v~~s~~~~~l~~~~v~ 294 (475)
..+..|...|.+++| +|+ +. +|++++.|+.|++||+.+++ ....+ .+...+.
T Consensus 107 ~~~~~h~~~v~~~~~--~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~-------------- 169 (416)
T 2pm9_A 107 ARFSNHSSSVKTVKF--NAKQDN-VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI-------------- 169 (416)
T ss_dssp EECCCSSSCCCEEEE--CSSSTT-BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC--------------
T ss_pred hhccCCccceEEEEE--cCCCCC-EEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee--------------
Confidence 666789999999999 998 55 59999999999999998876 32222 2566777
Q ss_pred ecccceEEEEeeeeeeEEECCC-CcEEEEEeCCCcEEEEECCCCceEEEeecC------CCCeEEEEEecCC-CEEEEEe
Q 011924 295 NFMTEKVIICLLCLQHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCGH------LDFSFASAWHPNG-VTFATGN 366 (475)
Q Consensus 295 d~~~~~~~~~~~~i~~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h------~~~v~~~~~sp~g-~~l~t~s 366 (475)
+++|+|+ +.+|++++.++.|++||+++++.+..+..| ...+.+++|+|++ .++++++
T Consensus 170 ---------------~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 234 (416)
T 2pm9_A 170 ---------------SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT 234 (416)
T ss_dssp ---------------EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE
T ss_pred ---------------EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEE
Confidence 9999998 789999999999999999999999988876 7899999999987 6999999
Q ss_pred CCC---eEEEEECCCCCceEEEEe-cCCCceEEEEEcc-CCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEc
Q 011924 367 QDK---TCRIWDLRNLSESVAVLK-GNLGAIRSIRYTS-DGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFS 441 (475)
Q Consensus 367 ~dg---~v~iwd~~~~~~~~~~~~-~~~~~v~~l~~sp-dg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fs 441 (475)
.|+ +|++||++....++..+. +|...|++++|+| ++++|++++.|+.|++||+.+++.+..+..|.+.|.+++|+
T Consensus 235 ~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s 314 (416)
T 2pm9_A 235 GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFA 314 (416)
T ss_dssp CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEEC
T ss_pred CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEEC
Confidence 998 999999987557788888 8999999999999 99999999999999999999999999999999999999999
Q ss_pred CCC-CeEEEEEecCCcc
Q 011924 442 PDT-ESLFIGVWDRTYG 457 (475)
Q Consensus 442 pdg-~~l~~~~~D~~~~ 457 (475)
|++ .+|++++.|+.+.
T Consensus 315 ~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 315 PEAPDLFACASFDNKIE 331 (416)
T ss_dssp TTCTTEEEECCSSSEEE
T ss_pred CCCCCEEEEEecCCcEE
Confidence 999 8999999998763
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.7e-31 Score=257.89 Aligned_cols=274 Identities=14% Similarity=0.117 Sum_probs=224.1
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
+..+.|.++...+++. .++.|.+|+..+++...+..+.+ +...|.+++| ++++|++|+.+|
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~l~~~~~dg 74 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE----------------HNGQVTGVDWAPDSNRIVTCGTDR 74 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC----------------CSSCEEEEEEETTTTEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC----------------CCCcccEEEEeCCCCEEEEEcCCC
Confidence 4556677777777776 67999999987775323333222 2346899999 789999999999
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCee---eeeee--ccccEEeccC
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL---SKHFR--FPWPVNVSSS 284 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~---~~~~~--~~~~v~~s~~ 284 (475)
.|++|++....... ......|...|.+++| +|+++. +++++.|+.|++|++..++. ...+. +...+.
T Consensus 75 ~i~vwd~~~~~~~~-~~~~~~~~~~v~~~~~--~~~~~~-l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~---- 146 (372)
T 1k8k_C 75 NAYVWTLKGRTWKP-TLVILRINRAARCVRW--APNEKK-FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL---- 146 (372)
T ss_dssp CEEEEEEETTEEEE-EEECCCCSSCEEEEEE--CTTSSE-EEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEE----
T ss_pred eEEEEECCCCeeee-eEEeecCCCceeEEEE--CCCCCE-EEEEeCCCEEEEEEecCCCcceeeeeeecccCCCee----
Confidence 99999997654332 2344678889999999 999986 89999999999999987652 23332 567788
Q ss_pred CceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEEC------------------CCCceEEEeecC
Q 011924 285 YCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDS------------------MTGKTIASLCGH 346 (475)
Q Consensus 285 ~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~------------------~~~~~~~~l~~h 346 (475)
+++|+|++++|++++.++.|++||+ ..++.+..+.+|
T Consensus 147 -------------------------~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (372)
T 1k8k_C 147 -------------------------SLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS 201 (372)
T ss_dssp -------------------------EEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC
T ss_pred -------------------------EEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCC
Confidence 9999999999999999999999995 467888999999
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCC--Cee
Q 011924 347 LDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS--GYE 424 (475)
Q Consensus 347 ~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~--~~~ 424 (475)
...+.+++|+|++++|++++.|++|++||+++ ++++..+..|..+|.+++|+|+|++|+++ .|+.|++|++.+ +..
T Consensus 202 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~ 279 (372)
T 1k8k_C 202 CGWVHGVCFSANGSRVAWVSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKL 279 (372)
T ss_dssp SSCEEEEEECSSSSEEEEEETTTEEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEE
T ss_pred CCeEEEEEECCCCCEEEEEeCCCEEEEEECCC-CceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceE
Confidence 99999999999999999999999999999987 78899999999999999999999999888 899999999987 421
Q ss_pred --------------------------------E------EEE-eccCCCeEEEEEc-CCC---CeEEEEEecCCcc
Q 011924 425 --------------------------------K------EQE-IDFFGEISGISFS-PDT---ESLFIGVWDRTYG 457 (475)
Q Consensus 425 --------------------------------~------~~~-~~~~~~i~~l~fs-pdg---~~l~~~~~D~~~~ 457 (475)
. ..+ .+|.+.|.+++|+ ++| .+|++|+.|+.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~ 355 (372)
T 1k8k_C 280 SFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 355 (372)
T ss_dssp EECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEE
T ss_pred EEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceE
Confidence 0 222 3788999999966 677 9999999998763
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=272.98 Aligned_cols=278 Identities=13% Similarity=0.169 Sum_probs=227.2
Q ss_pred ccceeEEecCCCeEEEe-cCCeEEEEecCCCC--ceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--c-CcEEEEE
Q 011924 132 QLRNLVWATSKHDVYLM-SHFSVIHWSSLTSS--RSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--K-DKLLVAG 205 (475)
Q Consensus 132 ~lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~-~~~lvsg 205 (475)
....+.|.++...|++. .++.|.+|+..+.. ...+..+.+ +...|.+++| + +++|++|
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~~l~s~ 132 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN----------------HSSSVKTVKFNAKQDNVLASG 132 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC----------------SSSCCCEEEECSSSTTBEEEE
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccC----------------CccceEEEEEcCCCCCEEEEE
Confidence 34556688877777775 56899999987621 112222221 2346889999 4 8899999
Q ss_pred ecCceEEEEeCCCCC------ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeec----
Q 011924 206 GFQGELICKHLDRPG------VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF---- 275 (475)
Q Consensus 206 ~~dg~i~vw~~~~~~------~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~---- 275 (475)
+.+|.|++|++.... ..........|...|.+++| +|++..++++++.|+.|++||+.+++.+..+..
T Consensus 133 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 133 GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW--NQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE--CSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS
T ss_pred cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEe--CCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc
Confidence 999999999998765 33222334678889999999 999555699999999999999999988887773
Q ss_pred ---cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCC-cEEEEEeCCC---cEEEEECCCC-ceEEEee-cC
Q 011924 276 ---PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDG-KLLIIVGDNP---DGLLVDSMTG-KTIASLC-GH 346 (475)
Q Consensus 276 ---~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~dg---~i~iwd~~~~-~~~~~l~-~h 346 (475)
...+. +++|+|++ .++++++.++ .|++||++++ +++..+. +|
T Consensus 211 ~~~~~~v~-----------------------------~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~ 261 (416)
T 2pm9_A 211 SGIKQQLS-----------------------------VVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH 261 (416)
T ss_dssp SCCCCCEE-----------------------------EEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC
T ss_pred cccCCceE-----------------------------EEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc
Confidence 56777 99999987 6899999998 9999999986 6777888 89
Q ss_pred CCCeEEEEEec-CCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCC-CEEEEEcCCCeEEEEECCCCee
Q 011924 347 LDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG-RYMATAEPADFVHVYDVKSGYE 424 (475)
Q Consensus 347 ~~~v~~~~~sp-~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg-~~la~~~~dg~i~iwd~~~~~~ 424 (475)
...|.+++|+| ++++|++++.|++|++||+++ ++++..+.+|...|.+++|+|++ ++|++++.|+.|+|||+.++..
T Consensus 262 ~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 262 QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp SSCEEEEEECSSCSSCEEEEESSSEEEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC-CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 99999999999 999999999999999999987 78899999999999999999999 8999999999999999987653
Q ss_pred EEEEec-----------------------------------cCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 425 KEQEID-----------------------------------FFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 425 ~~~~~~-----------------------------------~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
...... |...+.+++|+|+|++|++++.|+++.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~ 408 (416)
T 2pm9_A 341 TLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVS 408 (416)
T ss_dssp SSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBC
T ss_pred CcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEE
Confidence 322111 456778999999999999999998875
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.7e-31 Score=259.18 Aligned_cols=269 Identities=16% Similarity=0.152 Sum_probs=212.8
Q ss_pred cceeEEecCC-CeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE---cCcEEEEEec
Q 011924 133 LRNLVWATSK-HDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGF 207 (475)
Q Consensus 133 lr~l~~~~~~-~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~~lvsg~~ 207 (475)
...+.|.+.. ..++.. .++.|.+|+..+++....+...+ +...|.+++| ++++|++|+.
T Consensus 76 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMG----------------PGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp EEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCS----------------TTCBEEEEEEETTEEEEEEEEET
T ss_pred EEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCC----------------cCCceeEEEeCCCCCCEEEEEeC
Confidence 3445577766 555554 56899999998777666544322 2347999999 4589999999
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCc
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYC 286 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~ 286 (475)
||.|++|++.. ...........+...|.+++| +|+++. |++++.|+.|++||+ +++.+..+. +...+.
T Consensus 140 d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~--~~~~~~-l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~------ 208 (383)
T 3ei3_B 140 RGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDV--SVSRQM-LATGDSTGRLLLLGL-DGHEIFKEKLHKAKVT------ 208 (383)
T ss_dssp TTEEEEEETTS-CEEEEEECCCCSSCCEEEEEE--ETTTTE-EEEEETTSEEEEEET-TSCEEEEEECSSSCEE------
T ss_pred CCEEEEEECCC-CceEEEeccCCCCCCeEEEEE--CCCCCE-EEEECCCCCEEEEEC-CCCEEEEeccCCCcEE------
Confidence 99999999985 323222223345578999999 999986 999999999999999 455666665 788898
Q ss_pred eEEEEEEeecccceEEEEeeeeeeEEECCCCc-EEEEEeCCCcEEEEECCC----CceEEEeecCCCCeEEEEEec-CCC
Q 011924 287 IILLCRLLNFMTEKVIICLLCLQHSSQSPDGK-LLIIVGDNPDGLLVDSMT----GKTIASLCGHLDFSFASAWHP-NGV 360 (475)
Q Consensus 287 ~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~dg~i~iwd~~~----~~~~~~l~~h~~~v~~~~~sp-~g~ 360 (475)
+++|+|+++ +|++++.|+.|++||+++ +..+..+ +|...|.+++|+| +++
T Consensus 209 -----------------------~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~ 264 (383)
T 3ei3_B 209 -----------------------HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST 264 (383)
T ss_dssp -----------------------EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC
T ss_pred -----------------------EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC
Confidence 999999999 999999999999999997 6666666 6999999999999 999
Q ss_pred EEEEEeCCCeEEEEECCCCCceEEEEecCC-----------------CceEEEEEccCCCEEEEEcCCCeEEEEECCCCe
Q 011924 361 TFATGNQDKTCRIWDLRNLSESVAVLKGNL-----------------GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 423 (475)
Q Consensus 361 ~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~-----------------~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~ 423 (475)
+|++++.|++|++||+++ ......+.+|. +.+..++|+|+|++ +++.|+.|+|||+.++.
T Consensus 265 ~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 265 KLLTTDQRNEIRVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp EEEEEESSSEEEEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC
T ss_pred EEEEEcCCCcEEEEECCC-CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc
Confidence 999999999999999987 44444554332 23445667777766 77789999999999999
Q ss_pred eEEEEec--cCCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 424 EKEQEID--FFGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 424 ~~~~~~~--~~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
.+..+.. |.+.+..++|+|+|++|++|+ |+.+
T Consensus 342 ~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i 375 (383)
T 3ei3_B 342 LVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNI 375 (383)
T ss_dssp EEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEE
T ss_pred eeeeecCCCCCceEEEEEEecCccEEEEec-CCcE
Confidence 9888876 457788889999999999996 8654
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-33 Score=276.61 Aligned_cols=233 Identities=13% Similarity=0.089 Sum_probs=192.3
Q ss_pred ceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC
Q 011924 189 QTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 189 ~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
..+|.+++| ++++|++|+.+|.|++|++..... .+...+..|...|.+++| +|+++. |++++.|++|++||+.+
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~--s~~~~~-l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW-KHARTFSDHDKIVTCVDW--APKSNR-IVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE-EECCCBCCCSSCEEEEEE--CTTTCC-EEEEETTSSEEEC----
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce-EEEEEEecCCceEEEEEE--eCCCCE-EEEEeCCCeEEEEEcCC
Confidence 447888888 799999999999999999986531 223566789999999999 999986 99999999999999988
Q ss_pred Ce---eeeee-eccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCc---e
Q 011924 267 YQ---LSKHF-RFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGK---T 339 (475)
Q Consensus 267 ~~---~~~~~-~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~---~ 339 (475)
++ ....+ .+...+. +++|+|++++|++++.|+.|++||+++++ .
T Consensus 87 ~~~~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 137 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAAT-----------------------------FVRWSPNEDKFAVGSGARVISVCYFEQENDWWV 137 (377)
T ss_dssp --CCCCEEECCCCSSCEE-----------------------------EEECCTTSSCCEEEESSSCEEECCC-----CCC
T ss_pred CCceeeeeEecccCCceE-----------------------------EEEECCCCCEEEEEecCCeEEEEEECCccccee
Confidence 76 33333 3778888 99999999999999999999999999887 4
Q ss_pred EEEeec-CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCC-----------------CCceEEEEecCCCceEEEEEccC
Q 011924 340 IASLCG-HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN-----------------LSESVAVLKGNLGAIRSIRYTSD 401 (475)
Q Consensus 340 ~~~l~~-h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~-----------------~~~~~~~~~~~~~~v~~l~~spd 401 (475)
...+.+ |...|.+++|+|++++|++++.|++|++||++. .++++..+ +|.+.|.+++|+|+
T Consensus 138 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~ 216 (377)
T 3dwl_C 138 SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPS 216 (377)
T ss_dssp CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTT
T ss_pred eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCC
Confidence 777887 999999999999999999999999999999852 13455555 88899999999999
Q ss_pred CCEEEEEcCCCeEEEEECCCCee----EEEEeccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 402 GRYMATAEPADFVHVYDVKSGYE----KEQEIDFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 402 g~~la~~~~dg~i~iwd~~~~~~----~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
|++|++++.|+.|+|||+.++.. +..+..|.+.|.+++|+|+|++|++|+.|+.
T Consensus 217 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 274 (377)
T 3dwl_C 217 GNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSP 274 (377)
T ss_dssp SSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSE
T ss_pred CCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE
Confidence 99999999999999999999877 6778889999999999999999988865543
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-30 Score=251.34 Aligned_cols=232 Identities=16% Similarity=0.202 Sum_probs=200.5
Q ss_pred ceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEee--ecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEEC
Q 011924 189 QTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRT--TYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM 264 (475)
Q Consensus 189 ~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~--~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~ 264 (475)
..+|.+++| ++++|++++ +|.|++|++...+....... ...|...|.+++| +|+++. +++++.|+.|++|++
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~-l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL--LPDGCT-LIVGGEASTLSIWDL 126 (337)
T ss_dssp SSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEE--CTTSSE-EEEEESSSEEEEEEC
T ss_pred CCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEE--cCCCCE-EEEEcCCCcEEEEEC
Confidence 347888998 788999998 99999999987653221122 2368889999999 999986 888999999999999
Q ss_pred CCCe--eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEE
Q 011924 265 GKYQ--LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIA 341 (475)
Q Consensus 265 ~~~~--~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~ 341 (475)
.+++ ....+. +...+. +++|+|++++|++++.++.|++||+++++.+.
T Consensus 127 ~~~~~~~~~~~~~~~~~i~-----------------------------~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACY-----------------------------ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp CCC--EEEEEEECSSSCEE-----------------------------EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCcceeeecccCCCceE-----------------------------EEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 8876 344444 666788 99999999999999999999999999999999
Q ss_pred EeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCC
Q 011924 342 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 421 (475)
Q Consensus 342 ~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~ 421 (475)
.+.+|...+.+++|+|++++|++++.|+.|++||+++ ++.+..+. +...+.+++|+|+|++|++++.++.|++||+.+
T Consensus 178 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 178 QFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE-GRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred eeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC-CceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 9999999999999999999999999999999999987 66666654 667899999999999999999999999999998
Q ss_pred CeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 422 GYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 422 ~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
+.. ..+..|.+.|.+++|+|++++|++++.|+.+
T Consensus 256 ~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 289 (337)
T 1gxr_A 256 PDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLL 289 (337)
T ss_dssp SCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCe-EEEcCCccceeEEEECCCCCEEEEecCCCcE
Confidence 764 4667899999999999999999999998765
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.8e-31 Score=254.32 Aligned_cols=250 Identities=15% Similarity=0.162 Sum_probs=206.9
Q ss_pred cceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCce-EEEeeecCCCCceeEEEEEeCC--CCCeEEEEEeCCCeEEEE
Q 011924 188 TQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVS-FCSRTTYDDNAITNAVEIYGSP--SGAVHFTASNNDCGVRDF 262 (475)
Q Consensus 188 ~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~-~~~~~~~~~~~~v~~l~~~~s~--~g~~~l~s~s~dg~v~iw 262 (475)
+...|++++| ++++|++|+.||.|++|++...... .....+..|...|.+++| +| ++.. |++++.|++|++|
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~d~~~-l~s~~~dg~v~vw 86 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDW--ASPEYGRI-IASASYDKTVKLW 86 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEE--CCGGGCSE-EEEEETTSCEEEE
T ss_pred cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEE--cCCCCCCE-EEEEcCCCeEEEE
Confidence 3457999999 8899999999999999999865432 234556789999999999 88 4765 9999999999999
Q ss_pred ECCCC---------eeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC--CcEEEEEeCCCcEE
Q 011924 263 DMGKY---------QLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD--GKLLIIVGDNPDGL 330 (475)
Q Consensus 263 d~~~~---------~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~dg~i~ 330 (475)
|+.++ +.+..+. +..++. +++|+|+ +.+|++++.|+.|+
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLY-----------------------------SVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEE-----------------------------EEEECCGGGCSEEEEEETTCEEE
T ss_pred ecCCCcccccccCcceeeeecccCCcee-----------------------------EEEEcCCCCCcEEEEecCCCcEE
Confidence 99876 3444554 677888 9999999 99999999999999
Q ss_pred EEECCCCceEEEee-------------cCCCCeEEEEEecC---CCEEEEEeCCCeEEEEECCCCCc--eEEEEecCCCc
Q 011924 331 LVDSMTGKTIASLC-------------GHLDFSFASAWHPN---GVTFATGNQDKTCRIWDLRNLSE--SVAVLKGNLGA 392 (475)
Q Consensus 331 iwd~~~~~~~~~l~-------------~h~~~v~~~~~sp~---g~~l~t~s~dg~v~iwd~~~~~~--~~~~~~~~~~~ 392 (475)
+||+++++.+..+. +|...+.+++|+|+ +.++++++.++.+.+|+... +. .+..+.+|...
T Consensus 138 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 138 LYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKD-GKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTT-SCEEEEEECCCCCSC
T ss_pred EecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCC-CceeeeeecCCCCcc
Confidence 99999877544332 57889999999997 99999999999998888765 44 36777889999
Q ss_pred eEEEEEccCC----CEEEEEcCCCeEEEEECCCC----------------------------------------------
Q 011924 393 IRSIRYTSDG----RYMATAEPADFVHVYDVKSG---------------------------------------------- 422 (475)
Q Consensus 393 v~~l~~spdg----~~la~~~~dg~i~iwd~~~~---------------------------------------------- 422 (475)
|++++|+|++ ++|++++.|+.|++||+.++
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 9999999998 89999999999999999864
Q ss_pred eeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcceEEEEEeecceeee
Q 011924 423 YEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRCRNYSYL 471 (475)
Q Consensus 423 ~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~~ll~~~~~~~~~~l 471 (475)
..+..+..|.+.|.+++|+|++++|++|+.|+.+ .++....+.....+
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v-~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKV-RLWKATYSNEFKCM 344 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSSCCEEEEETTSCE-EEEEECTTSCEEEE
T ss_pred cEEEEEecccccEEEEEEcCCCCEEEEecCCCcE-EEEecCcCcchhhe
Confidence 4566677799999999999999999999999876 34444444444444
No 52
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-30 Score=244.84 Aligned_cols=263 Identities=14% Similarity=0.131 Sum_probs=219.6
Q ss_pred ceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCce
Q 011924 134 RNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGE 210 (475)
Q Consensus 134 r~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~ 210 (475)
+.+.| ++...++.. .++.|.+|+..++.....+.. +...|.+++| ++++|++|+.+|.
T Consensus 22 ~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 22 RDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYT------------------GQGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp EEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEE------------------CSSCEEEEEEETTTTEEEEEETTSC
T ss_pred EEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeec------------------CCccEEEEEECCCCCEEEEecCCCe
Confidence 34445 555556654 578999999876654443321 2346889988 8999999999999
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceEE
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCIIL 289 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l~ 289 (475)
|++|++..............|...|.++.| +++ ++++++.|+.|++|| .++....+. +..++.
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~-~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~--------- 146 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSF----QDG-VVISGSWDKTAKVWK--EGSLVYNLQAHNASVW--------- 146 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEE----ETT-EEEEEETTSEEEEEE--TTEEEEEEECCSSCEE---------
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEe----cCC-EEEEEeCCCCEEEEc--CCcEEEecccCCCcee---------
Confidence 999999876544334566789999999988 345 499999999999999 556666665 778888
Q ss_pred EEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECCCCceEEEeec-CCCCeEEEEEecCCCEEEEEeC
Q 011924 290 LCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLCG-HLDFSFASAWHPNGVTFATGNQ 367 (475)
Q Consensus 290 ~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~-h~~~v~~~~~sp~g~~l~t~s~ 367 (475)
+++|+| +++++++++.++.|++|| .++....+.. |...+.+++|+|++. +++++.
T Consensus 147 --------------------~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~ 203 (313)
T 3odt_A 147 --------------------DAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSN 203 (313)
T ss_dssp --------------------EEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEET
T ss_pred --------------------EEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccC
Confidence 899988 999999999999999999 5667777877 899999999999998 999999
Q ss_pred CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeE
Q 011924 368 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESL 447 (475)
Q Consensus 368 dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l 447 (475)
|+.|++||+++ ++++..+.+|.+.|++++|+|+| .|++++.|+.|++||+.+++.+..+..|.+.|.+++|+|+++ +
T Consensus 204 dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 280 (313)
T 3odt_A 204 DGLIKLVDMHT-GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-I 280 (313)
T ss_dssp TSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-E
T ss_pred CCeEEEEECCc-hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-E
Confidence 99999999987 78899999999999999999999 588999999999999999999999999999999999999998 6
Q ss_pred EEEEecCCcc
Q 011924 448 FIGVWDRTYG 457 (475)
Q Consensus 448 ~~~~~D~~~~ 457 (475)
++++.|+.+.
T Consensus 281 ~~~~~dg~i~ 290 (313)
T 3odt_A 281 IVGSSDNLVR 290 (313)
T ss_dssp EEEETTSCEE
T ss_pred EEEeCCCcEE
Confidence 6788888763
No 53
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-30 Score=254.78 Aligned_cols=237 Identities=14% Similarity=0.166 Sum_probs=201.1
Q ss_pred cceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCC--CCeEEEEEeCCCeEEEEE
Q 011924 188 TQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFD 263 (475)
Q Consensus 188 ~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~--g~~~l~s~s~dg~v~iwd 263 (475)
+...|++++| ++++|++|+.+|.|++|++..... .....+..|...|.+++| +++ +.. |++++.|+.|++||
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~--~~~~~~~~-l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDW--AHPKFGTI-LASCSYDGKVLIWK 85 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEE--CCGGGCSE-EEEEETTSCEEEEE
T ss_pred CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-eeeeEecCCCCcEEEEEe--CCCCCCCE-EEEeccCCEEEEEE
Confidence 3457999999 789999999999999999974332 234566789999999999 876 775 99999999999999
Q ss_pred CCCCe--eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC--CcEEEEEeCCCcEEEEECCCC-
Q 011924 264 MGKYQ--LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD--GKLLIIVGDNPDGLLVDSMTG- 337 (475)
Q Consensus 264 ~~~~~--~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~dg~i~iwd~~~~- 337 (475)
+.+++ .+..+. +...+. +++|+|+ +.+|++++.++.|++||++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVN-----------------------------SVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp EETTEEEEEEEECCCSSCEE-----------------------------EEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred cCCCceeEeeeecCCCcceE-----------------------------EEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 99886 444444 778888 9999999 999999999999999999877
Q ss_pred -ceEEEeecCCCCeEEEEEec-------------CCCEEEEEeCCCeEEEEECCCCCc---eEEEEecCCCceEEEEEcc
Q 011924 338 -KTIASLCGHLDFSFASAWHP-------------NGVTFATGNQDKTCRIWDLRNLSE---SVAVLKGNLGAIRSIRYTS 400 (475)
Q Consensus 338 -~~~~~l~~h~~~v~~~~~sp-------------~g~~l~t~s~dg~v~iwd~~~~~~---~~~~~~~~~~~v~~l~~sp 400 (475)
.....+.+|...|.+++|+| ++.+|++++.|++|++||++.... ....+.+|...|.+++|+|
T Consensus 137 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp 216 (379)
T 3jrp_A 137 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 216 (379)
T ss_dssp CCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred ceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC
Confidence 34556778999999999999 699999999999999999976432 4567788999999999999
Q ss_pred C---CCEEEEEcCCCeEEEEECCCCe---eEEEE--eccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 401 D---GRYMATAEPADFVHVYDVKSGY---EKEQE--IDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 401 d---g~~la~~~~dg~i~iwd~~~~~---~~~~~--~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+ +++|++++.|+.|+|||+.++. ..... ..|.+.|.+++|+|+|++|++++.|+.+.
T Consensus 217 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 281 (379)
T 3jrp_A 217 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 281 (379)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEE
T ss_pred CCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEE
Confidence 9 8999999999999999998863 12222 23778999999999999999999998873
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.5e-31 Score=257.42 Aligned_cols=237 Identities=13% Similarity=0.109 Sum_probs=205.8
Q ss_pred ccceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEEC
Q 011924 187 FTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM 264 (475)
Q Consensus 187 ~~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~ 264 (475)
++..+|.+++| ++++|++|+.+|.|++|++...... ....+..|...|.+++| +|+++. |++++.|+.|++||+
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~-~~~~~~~h~~~v~~~~~--~~~~~~-l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWV-QVHELKEHNGQVTGVDW--APDSNR-IVTCGTDRNAYVWTL 81 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEE-EEEEEECCSSCEEEEEE--ETTTTE-EEEEETTSCEEEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEE-eeeeecCCCCcccEEEE--eCCCCE-EEEEcCCCeEEEEEC
Confidence 34567999999 8899999999999999999865421 23556688999999999 999986 889999999999999
Q ss_pred CCCeeeeee---eccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCce--
Q 011924 265 GKYQLSKHF---RFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT-- 339 (475)
Q Consensus 265 ~~~~~~~~~---~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~-- 339 (475)
.+++....+ .+...+. +++|+|++++|++++.++.|++||++.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~ 132 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAAR-----------------------------CVRWAPNEKKFAVGSGSRVISICYFEQENDWW 132 (372)
T ss_dssp ETTEEEEEEECCCCSSCEE-----------------------------EEEECTTSSEEEEEETTSSEEEEEEETTTTEE
T ss_pred CCCeeeeeEEeecCCCcee-----------------------------EEEECCCCCEEEEEeCCCEEEEEEecCCCcce
Confidence 888755443 3677888 999999999999999999999999988763
Q ss_pred -EE-EeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECC-----------------CCCceEEEEecCCCceEEEEEcc
Q 011924 340 -IA-SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR-----------------NLSESVAVLKGNLGAIRSIRYTS 400 (475)
Q Consensus 340 -~~-~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~-----------------~~~~~~~~~~~~~~~v~~l~~sp 400 (475)
.. ...+|...|.+++|+|++++|++++.|+.|++||++ ..++++..+.+|...|.+++|+|
T Consensus 133 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 133 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred eeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC
Confidence 23 335789999999999999999999999999999964 23678888889999999999999
Q ss_pred CCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 401 DGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 401 dg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
++++|++++.|+.|++||+.++..+..+..|...|.+++|+|++++|++| .|+.+.
T Consensus 213 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~ 268 (372)
T 1k8k_C 213 NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPV 268 (372)
T ss_dssp SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCE
T ss_pred CCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEE
Confidence 99999999999999999999999999999999999999999999988877 887763
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-29 Score=253.50 Aligned_cols=286 Identities=17% Similarity=0.232 Sum_probs=235.5
Q ss_pred EecCCCeEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCceEEEEeC
Q 011924 138 WATSKHDVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHL 216 (475)
Q Consensus 138 ~~~~~~~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg~i~vw~~ 216 (475)
+..+...++. ..++.|.+|+..+++....+ .+ +...|.++++++++|++|+.||.|++|++
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~--~~----------------h~~~v~~~~~~~~~l~s~~~dg~i~vwd~ 186 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL--VG----------------HTGGVWSSQMRDNIIISGSTDRTLKVWNA 186 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEEC--CC----------------CSSCEEEEEEETTEEEEEETTSCEEEEET
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEE--cC----------------CCCCEEEEEecCCEEEEEeCCCeEEEEEC
Confidence 3334555555 46789999998877654332 21 23478999999999999999999999999
Q ss_pred CCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEE-eccCCceEE-----
Q 011924 217 DRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVN-VSSSYCIIL----- 289 (475)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~-~s~~~~~l~----- 289 (475)
.+.... .....|...|.++.+ + ++. +++++.|++|++||+.+++.+..+. +..++. +..++..++
T Consensus 187 ~~~~~~---~~~~~h~~~v~~~~~--~--~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 258 (445)
T 2ovr_B 187 ETGECI---HTLYGHTSTVRCMHL--H--EKR-VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYD 258 (445)
T ss_dssp TTTEEE---EEECCCSSCEEEEEE--E--TTE-EEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETT
T ss_pred CcCcEE---EEECCCCCcEEEEEe--c--CCE-EEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCC
Confidence 875433 566789999999988 4 444 9999999999999999998887776 544444 223455553
Q ss_pred -EEEEeecccceEEEEee----eeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEE
Q 011924 290 -LCRLLNFMTEKVIICLL----CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT 364 (475)
Q Consensus 290 -~~~v~d~~~~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t 364 (475)
.+++||..+++.+.... .+.+++| ++..+++++.|+.|++||+++++.+..+.+|...+.++.+ +++++++
T Consensus 259 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~ 334 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVS 334 (445)
T ss_dssp SCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEE
T ss_pred CEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEE
Confidence 58999999988776654 5778888 7899999999999999999999999999999999988877 4679999
Q ss_pred EeCCCeEEEEECCCCCceEEEEec---CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEE-----eccCCCeE
Q 011924 365 GNQDKTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE-----IDFFGEIS 436 (475)
Q Consensus 365 ~s~dg~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~i~ 436 (475)
|+.||+|++||+++ ++++..+.. |...|.+++|+ +++|++|+.||.|++||+.+++.+..+ ..|.+.|.
T Consensus 335 ~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~ 411 (445)
T 2ovr_B 335 GNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 411 (445)
T ss_dssp EETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEE
T ss_pred EeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEE
Confidence 99999999999987 778888876 77899999996 579999999999999999999888877 35778999
Q ss_pred EEEEcCCCCeEEEEEecCCc
Q 011924 437 GISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 437 ~l~fspdg~~l~~~~~D~~~ 456 (475)
+++|+|++.+|++|+.|++.
T Consensus 412 ~~~~s~~~~~la~~~~dg~~ 431 (445)
T 2ovr_B 412 RIRASNTKLVCAVGSRNGTE 431 (445)
T ss_dssp EEEECSSEEEEEEECSSSSS
T ss_pred EEEecCCEEEEEEcccCCCC
Confidence 99999999999999999973
No 56
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-30 Score=254.07 Aligned_cols=265 Identities=11% Similarity=0.104 Sum_probs=195.2
Q ss_pred cceeEEEEEE--c---CcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEE
Q 011924 188 TQTQVSTLAV--K---DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDF 262 (475)
Q Consensus 188 ~~~~v~~l~~--~---~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iw 262 (475)
+...|++++| + +++|++|+.+|.|++|++...+... ......|...|.+++| +|+++. |++++.|+.|++|
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~--~~~~~~-l~s~~~dg~v~iw 113 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI-PKAQQMHTGPVLDVCW--SDDGSK-VFTASCDKTAKMW 113 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE-EEEEEECSSCEEEEEE--CTTSSE-EEEEETTSEEEEE
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee-EEEeccccCCEEEEEE--CcCCCE-EEEEcCCCcEEEE
Confidence 3458999999 4 5899999999999999998744332 2456678999999999 999986 8899999999999
Q ss_pred ECCCCeeeeeeeccccEE---e--ccCCceEE------EEEEeecccceEEEEee---eeeeEEECCCCcEEEEEeCCCc
Q 011924 263 DMGKYQLSKHFRFPWPVN---V--SSSYCIIL------LCRLLNFMTEKVIICLL---CLQHSSQSPDGKLLIIVGDNPD 328 (475)
Q Consensus 263 d~~~~~~~~~~~~~~~v~---~--s~~~~~l~------~~~v~d~~~~~~~~~~~---~i~~~~~sp~g~~l~~~~~dg~ 328 (475)
|+.+++.+....+..++. | ++++..++ .+++||..+++.+.... .+.++.+ .+..+++++.++.
T Consensus 114 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 191 (368)
T 3mmy_A 114 DLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV--IYPMAVVATAERG 191 (368)
T ss_dssp ETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEE--ETTEEEEEEGGGC
T ss_pred EcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEe--cCCeeEEEeCCCc
Confidence 999999888777777766 3 44444332 34555555444333222 2222222 2234444555555
Q ss_pred EEEEECCCCceEEEe-e-cCCCCeEEEEEecCCCE----EEEEeCCCeEEEEECCCCC--ceEEEEecCCC---------
Q 011924 329 GLLVDSMTGKTIASL-C-GHLDFSFASAWHPNGVT----FATGNQDKTCRIWDLRNLS--ESVAVLKGNLG--------- 391 (475)
Q Consensus 329 i~iwd~~~~~~~~~l-~-~h~~~v~~~~~sp~g~~----l~t~s~dg~v~iwd~~~~~--~~~~~~~~~~~--------- 391 (475)
+.+|+++........ . .+...+.++++.++... +++++.|+.|++||++... ..+..+.+|..
T Consensus 192 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (368)
T 3mmy_A 192 LIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQ 271 (368)
T ss_dssp EEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCE
T ss_pred EEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccc
Confidence 555555433322111 1 12344566666665544 9999999999999998632 46777777765
Q ss_pred ---ceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcce
Q 011924 392 ---AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGS 458 (475)
Q Consensus 392 ---~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~~ 458 (475)
+|++++|+|+|++|++++.||.|+|||+.++..+..+..|.+.|.+++|+|+|++|++|+.|+....
T Consensus 272 ~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 272 DIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp EECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred cccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 7999999999999999999999999999999999999999999999999999999999999876543
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-30 Score=258.66 Aligned_cols=261 Identities=14% Similarity=0.096 Sum_probs=219.6
Q ss_pred eeEEEEEE--cCc-EEEEEecCceEEEEeC----CCCCc------eEEEe-eec------CCCCceeEEEEEeCCCCCeE
Q 011924 190 TQVSTLAV--KDK-LLVAGGFQGELICKHL----DRPGV------SFCSR-TTY------DDNAITNAVEIYGSPSGAVH 249 (475)
Q Consensus 190 ~~v~~l~~--~~~-~lvsg~~dg~i~vw~~----~~~~~------~~~~~-~~~------~~~~~v~~l~~~~s~~g~~~ 249 (475)
.+|.+++| ++. +|++|+.+|.|++|++ ..... ..... ... .|.+.|.+++| +|+++.
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~- 122 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW--SHDGNS- 122 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE--CTTSSE-
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE--cCCCCE-
Confidence 46888998 778 9999999999999999 66552 21111 111 15778999999 999986
Q ss_pred EEEEeCCCeEEEEECCCCeeeeeee-ccc---cEEeccCCceEE------EEEEeecccceEEEEee----e--------
Q 011924 250 FTASNNDCGVRDFDMGKYQLSKHFR-FPW---PVNVSSSYCIIL------LCRLLNFMTEKVIICLL----C-------- 307 (475)
Q Consensus 250 l~s~s~dg~v~iwd~~~~~~~~~~~-~~~---~v~~s~~~~~l~------~~~v~d~~~~~~~~~~~----~-------- 307 (475)
|++++.|+.|++|+ .+++.+..+. +.. .+.|++++..++ .+++||..+++...... .
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAEN 201 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecc
Confidence 89999999999999 4566666655 444 455899988775 58999999888776544 2
Q ss_pred -------eeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCC
Q 011924 308 -------LQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS 380 (475)
Q Consensus 308 -------i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~ 380 (475)
+.+++|+|++ .+++++.++.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||++. .
T Consensus 202 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~ 279 (425)
T 1r5m_A 202 HSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN-G 279 (425)
T ss_dssp ----CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS-B
T ss_pred ccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-C
Confidence 7889999975 478888999999999999999999999999999999999999999999999999999987 7
Q ss_pred ceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 381 ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 381 ~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+++..+..|...|.+++|+|++ +|++++.|+.|++||+.++..+..+..|...|.+++|+|++++|++++.|+.+.
T Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 355 (425)
T 1r5m_A 280 NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVN 355 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEE
Confidence 7888888899999999999999 999999999999999999999999999999999999999999999999998763
No 58
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.2e-30 Score=250.25 Aligned_cols=266 Identities=12% Similarity=0.081 Sum_probs=221.8
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceE-EEeccCCCCCCCCCCCCccccccceeEEEEEE--cCc-EEEEEec
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQ-VLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDK-LLVAGGF 207 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~-~lvsg~~ 207 (475)
...+.|+++...|++. .++.|.+|+..++.... ..... .+...|.+++| +++ +|++|+.
T Consensus 14 v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~~l~~~~~ 77 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL----------------RYKHPLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE----------------ECSSCEEEEEEEESSSEEEEEEET
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee----------------ecCCceEEEEECCCCCcEEEEEcC
Confidence 3445577777766664 57899999987765211 11111 12346889988 788 9999999
Q ss_pred CceEEEEeC-CCCCceEEEeeecC--CCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC---------Ceeeeeeec
Q 011924 208 QGELICKHL-DRPGVSFCSRTTYD--DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK---------YQLSKHFRF 275 (475)
Q Consensus 208 dg~i~vw~~-~~~~~~~~~~~~~~--~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~---------~~~~~~~~~ 275 (475)
+|.|++|++ ..... ..... |...|.+++| +| +.. +++++.|+.|++||+.+ ++.+..+.+
T Consensus 78 dg~i~~wd~~~~~~~----~~~~~~~~~~~v~~l~~--~~-~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 78 QGEILKVDLIGSPSF----QALTNNEANLGICRICK--YG-DDK-LIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp TSCEEEECSSSSSSE----EECBSCCCCSCEEEEEE--ET-TTE-EEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred CCeEEEEEeccCCce----EeccccCCCCceEEEEe--CC-CCE-EEEEcCCCeEEEEcccccccccccccCCeeeEEee
Confidence 999999999 75543 44556 8999999999 88 765 89999999999999987 776777777
Q ss_pred cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCC-Cc--eEEEeecCCCCeEE
Q 011924 276 PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMT-GK--TIASLCGHLDFSFA 352 (475)
Q Consensus 276 ~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~~--~~~~l~~h~~~v~~ 352 (475)
...+. +++|+|++ +++++.++.|++||+++ +. .......|...+.+
T Consensus 150 ~~~v~-----------------------------~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 198 (342)
T 1yfq_A 150 KNKIF-----------------------------TMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRD 198 (342)
T ss_dssp CCCEE-----------------------------EEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEE
T ss_pred CCceE-----------------------------EEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeE
Confidence 88888 99999987 88999999999999998 54 33445568889999
Q ss_pred EEEec-CCCEEEEEeCCCeEEEEECCCC-----CceEEEEecCCC---------ceEEEEEccCCCEEEEEcCCCeEEEE
Q 011924 353 SAWHP-NGVTFATGNQDKTCRIWDLRNL-----SESVAVLKGNLG---------AIRSIRYTSDGRYMATAEPADFVHVY 417 (475)
Q Consensus 353 ~~~sp-~g~~l~t~s~dg~v~iwd~~~~-----~~~~~~~~~~~~---------~v~~l~~spdg~~la~~~~dg~i~iw 417 (475)
++|+| +++++++++.||.|++|+++.. ......+..|.. .|.+++|+|+|++|++++.||.|++|
T Consensus 199 i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vw 278 (342)
T 1yfq_A 199 VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278 (342)
T ss_dssp EEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred EEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEE
Confidence 99999 9999999999999999999874 377888888765 99999999999999999999999999
Q ss_pred ECCCCeeEEEEecc-CCCeEEEEEcCCCCeEEEEEecCC
Q 011924 418 DVKSGYEKEQEIDF-FGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 418 d~~~~~~~~~~~~~-~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
|+.+++.+..+..| .+.|.+++ |++++|++|+.|+.
T Consensus 279 d~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 279 NLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp ETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred cCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 99999999998888 99999999 99999999999997
No 59
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.1e-30 Score=253.42 Aligned_cols=239 Identities=21% Similarity=0.313 Sum_probs=204.8
Q ss_pred cceeEEEEEE---cCcEEEEEecCceEEEEeCCCCCceEEEeee----------cCCCCceeEEEEEeCCCCCeEEEEEe
Q 011924 188 TQTQVSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTT----------YDDNAITNAVEIYGSPSGAVHFTASN 254 (475)
Q Consensus 188 ~~~~v~~l~~---~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~----------~~~~~~v~~l~~~~s~~g~~~l~s~s 254 (475)
+..+|++++| ++++|++|+.+|.|++|++............ ..|...|.+++| +|++..+|++++
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~ 119 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQW--YPHDTGMFTSSS 119 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEE--CTTCTTCEEEEE
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEE--ccCCCcEEEEEe
Confidence 3457999999 6799999999999999999876543211111 258899999999 994444599999
Q ss_pred CCCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC---CCcEEEEEeCCCcEEE
Q 011924 255 NDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP---DGKLLIIVGDNPDGLL 331 (475)
Q Consensus 255 ~dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp---~g~~l~~~~~dg~i~i 331 (475)
.|+.|++||+.+++....+.+...+. +++++| ++.++++++.++.|++
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (408)
T 4a11_B 120 FDKTLKVWDTNTLQTADVFNFEETVY-----------------------------SHHMSPVSTKHCLVAVGTRGPKVQL 170 (408)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEE-----------------------------EEEECSSCSSCCEEEEEESSSSEEE
T ss_pred CCCeEEEeeCCCCccceeccCCCcee-----------------------------eeEeecCCCCCcEEEEEcCCCeEEE
Confidence 99999999999999999888888888 889988 4559999999999999
Q ss_pred EECCCCceEEEeecCCCCeEEEEEecCCC-EEEEEeCCCeEEEEECCCCCceEEEE---------------ecCCCceEE
Q 011924 332 VDSMTGKTIASLCGHLDFSFASAWHPNGV-TFATGNQDKTCRIWDLRNLSESVAVL---------------KGNLGAIRS 395 (475)
Q Consensus 332 wd~~~~~~~~~l~~h~~~v~~~~~sp~g~-~l~t~s~dg~v~iwd~~~~~~~~~~~---------------~~~~~~v~~ 395 (475)
||+++++.+..+.+|...|.+++|+|+++ +|++++.||.|++||++....++..+ ..|...|.+
T Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 171 CDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp EESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred EeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence 99999999999999999999999999988 59999999999999998755566665 567889999
Q ss_pred EEEccCCCEEEEEcCCCeEEEEECCCCe-----------------------------------------------eEEEE
Q 011924 396 IRYTSDGRYMATAEPADFVHVYDVKSGY-----------------------------------------------EKEQE 428 (475)
Q Consensus 396 l~~spdg~~la~~~~dg~i~iwd~~~~~-----------------------------------------------~~~~~ 428 (475)
++|+|+|++|++++.|+.|++||+.++. .+..+
T Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 330 (408)
T 4a11_B 251 LCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML 330 (408)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee
Confidence 9999999999999999999999987643 34555
Q ss_pred eccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 429 IDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 429 ~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
..|.+.|.+++|+|++++|++|+.|+.+.
T Consensus 331 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 359 (408)
T 4a11_B 331 KGHYKTVDCCVFQSNFQELYSGSRDCNIL 359 (408)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred ccCCCeEEEEEEcCCCCEEEEECCCCeEE
Confidence 67889999999999999999999998774
No 60
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.4e-29 Score=251.50 Aligned_cols=286 Identities=14% Similarity=0.124 Sum_probs=226.3
Q ss_pred CCCeEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE-cCcEEEEEecCceEEEEeCCC
Q 011924 141 SKHDVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-KDKLLVAGGFQGELICKHLDR 218 (475)
Q Consensus 141 ~~~~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~lvsg~~dg~i~vw~~~~ 218 (475)
+...++. ..++.|.+|+..+++....+ .+ +...|.++++ .+.+|++|+.||.|++|++.+
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~--~~----------------h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQL--SG----------------HDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEE--CC----------------CSSCEEEEEECSTTEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEE--eC----------------CCcCEEEEEEcCCCEEEEEeCCCCEEEEECCC
Confidence 4455555 46799999998877644332 22 3347999999 455999999999999999986
Q ss_pred CCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeee-----------------------eee-
Q 011924 219 PGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSK-----------------------HFR- 274 (475)
Q Consensus 219 ~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~-----------------------~~~- 274 (475)
... ...+..|.+.|.++++...+++.. +++++.|++|++||+.++.... .+.
T Consensus 193 ~~~---~~~~~~h~~~v~~l~~~~~~~~~~-l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 193 GCC---THVFEGHNSTVRCLDIVEYKNIKY-IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp TEE---EEEECCCSSCEEEEEEEESSSCEE-EEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred CcE---EEEECCCCCccEEEEEecCCCCCE-EEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 543 356678999999999965577775 9999999999999998765321 122
Q ss_pred ccccEE-eccCCceEE------EEEEeecccceEEEEee----eeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEe
Q 011924 275 FPWPVN-VSSSYCIIL------LCRLLNFMTEKVIICLL----CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL 343 (475)
Q Consensus 275 ~~~~v~-~s~~~~~l~------~~~v~d~~~~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l 343 (475)
+...+. +++++..++ .+++||..+++.+.... .+.+++|+|+++++++++.|+.|++||+++++++..+
T Consensus 269 ~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 269 HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 333332 455555554 58999999988876654 6889999999999999999999999999999999999
Q ss_pred ecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCe
Q 011924 344 CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 423 (475)
Q Consensus 344 ~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~ 423 (475)
.+|...|.+++|+ +++|++++.||+|++||+++ ........ +...+..++|+|++++|++++ ++.|+|||+.+++
T Consensus 349 ~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 349 QGHTALVGLLRLS--DKFLVSAAADGSIRGWDAND-YSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp CCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT-CCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred eCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC-Cceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc
Confidence 9999999999997 58999999999999999987 44444433 556778899999999999998 8999999999998
Q ss_pred eEEE-EeccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 424 EKEQ-EIDFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 424 ~~~~-~~~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
.+.. ...|.+.|.+++|+ ++.+++++.+..
T Consensus 424 ~~~~~~~~~~~~v~~v~~~--~~~l~~~~~~~g 454 (464)
T 3v7d_B 424 LVHANILKDADQIWSVNFK--GKTLVAAVEKDG 454 (464)
T ss_dssp EEESCTTTTCSEEEEEEEE--TTEEEEEEEETT
T ss_pred EEehhhccCCCcEEEEEec--CCEEEEEEEeCC
Confidence 8765 55678899999997 556666655543
No 61
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.3e-31 Score=263.01 Aligned_cols=276 Identities=12% Similarity=0.061 Sum_probs=207.0
Q ss_pred ccceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecC
Q 011924 132 QLRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQ 208 (475)
Q Consensus 132 ~lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~d 208 (475)
.+..+.|+++...|++. .++.|.+|+..++....+..+.+ +...|.+++| ++++|++|+.|
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------------h~~~v~~~~~s~~~~~l~s~s~d 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSD----------------HDKIVTCVDWAPKSNRIVTCSQD 76 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCC----------------CSSCEEEEEECTTTCCEEEEETT
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEec----------------CCceEEEEEEeCCCCEEEEEeCC
Confidence 35566688777777765 57889999987653222211111 3347999999 78999999999
Q ss_pred ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe---eeeeee--ccccEEecc
Q 011924 209 GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ---LSKHFR--FPWPVNVSS 283 (475)
Q Consensus 209 g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~---~~~~~~--~~~~v~~s~ 283 (475)
|.|++|++..............|...|.+++| +|+++. |++++.|+.|++||+.+++ ....+. +...+.
T Consensus 77 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~--- 150 (377)
T 3dwl_C 77 RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW--SPNEDK-FAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL--- 150 (377)
T ss_dssp SSEEEC------CCCCEEECCCCSSCEEEEEC--CTTSSC-CEEEESSSCEEECCC-----CCCCEEECSSCCSCEE---
T ss_pred CeEEEEEcCCCCceeeeeEecccCCceEEEEE--CCCCCE-EEEEecCCeEEEEEECCcccceeeeEeecccCCCeE---
Confidence 99999999876522223556678999999999 999986 8999999999999998876 345554 677888
Q ss_pred CCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECC------------------CCceEEEeec
Q 011924 284 SYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSM------------------TGKTIASLCG 345 (475)
Q Consensus 284 ~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~------------------~~~~~~~l~~ 345 (475)
+++|+|++++|++++.|+.|++||++ .++++..+ +
T Consensus 151 --------------------------~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (377)
T 3dwl_C 151 --------------------------SLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P 203 (377)
T ss_dssp --------------------------EEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C
T ss_pred --------------------------EEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c
Confidence 99999999999999999999999985 35566666 8
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCce----EEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCC
Q 011924 346 HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES----VAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 421 (475)
Q Consensus 346 h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~----~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~ 421 (475)
|...|.+++|+|++++|++++.|++|++||+++ +.. +..+.+|...|.+++|+|+|++|++++.++.+ +|+...
T Consensus 204 ~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 204 SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp CSSSEEEEEECTTSSCEEEEETTTEEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC
T ss_pred CCceEEEEEECCCCCEEEEEeCCCcEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCC
Confidence 999999999999999999999999999999987 444 77888999999999999999999999877655 666542
Q ss_pred Ce-e--------------------------E---------EEE----------------eccCCCeEEEEEcCCCC----
Q 011924 422 GY-E--------------------------K---------EQE----------------IDFFGEISGISFSPDTE---- 445 (475)
Q Consensus 422 ~~-~--------------------------~---------~~~----------------~~~~~~i~~l~fspdg~---- 445 (475)
+. . . ..+ ..|.+.|.++++.+...
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~ 361 (377)
T 3dwl_C 282 SGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNIT 361 (377)
T ss_dssp ---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEE
T ss_pred CceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceE
Confidence 11 0 0 000 12888999999766543
Q ss_pred eEEEEEecCCcce
Q 011924 446 SLFIGVWDRTYGS 458 (475)
Q Consensus 446 ~l~~~~~D~~~~~ 458 (475)
.|++|+.|+.+..
T Consensus 362 ~~~s~g~Dg~i~i 374 (377)
T 3dwl_C 362 AFTSSGTDGRVVL 374 (377)
T ss_dssp EEEEEETTSEEEE
T ss_pred EEEeecCCCcEEE
Confidence 5999999998753
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.8e-31 Score=271.17 Aligned_cols=242 Identities=10% Similarity=-0.039 Sum_probs=192.3
Q ss_pred eeEEEEEE--c------CcEEEEEecCceEEEEeCCCCCce--------EEEeeecCCCCceeEEEEEeCCCCCeEEEEE
Q 011924 190 TQVSTLAV--K------DKLLVAGGFQGELICKHLDRPGVS--------FCSRTTYDDNAITNAVEIYGSPSGAVHFTAS 253 (475)
Q Consensus 190 ~~v~~l~~--~------~~~lvsg~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~ 253 (475)
..|.+++| + +++|++|+.||+|++|++...... .....+..|...|.+++| ++++ .|++|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~--s~~~--~lasg 283 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDF--LSPT--TVVCG 283 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEE--SSSS--EEEEE
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEe--cCCC--eEEEE
Confidence 36889998 3 469999999999999999765321 001245678899999999 8764 49999
Q ss_pred eCCCeEEEEECCCCe-eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeE--EECCCC-cEEEEEeCCCc
Q 011924 254 NNDCGVRDFDMGKYQ-LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHS--SQSPDG-KLLIIVGDNPD 328 (475)
Q Consensus 254 s~dg~v~iwd~~~~~-~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~--~~sp~g-~~l~~~~~dg~ 328 (475)
+.||+|++||++++. ....+. |..+|. ++ +|+|+| .+||+++.|++
T Consensus 284 s~DgtV~lWD~~~~~~~~~~~~~H~~~V~-----------------------------sv~~~~s~~g~~~laS~S~D~t 334 (524)
T 2j04_B 284 FKNGFVAEFDLTDPEVPSFYDQVHDSYIL-----------------------------SVSTAYSDFEDTVVSTVAVDGY 334 (524)
T ss_dssp ETTSEEEEEETTBCSSCSEEEECSSSCEE-----------------------------EEEEECCTTSCCEEEEEETTSE
T ss_pred eCCCEEEEEECCCCCCceEEeecccccEE-----------------------------EEEEEcCCCCCeEEEEeccCCe
Confidence 999999999998764 333444 778888 88 578888 89999999999
Q ss_pred EEEEECCCCceEEEeecCCC--CeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEE
Q 011924 329 GLLVDSMTGKTIASLCGHLD--FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMA 406 (475)
Q Consensus 329 i~iwd~~~~~~~~~l~~h~~--~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la 406 (475)
|+|||+++++++..+.+|.. .|.+++|+|++..+++++.|++|++||++. ..++..+.+|.+.|++++|+|+|++|+
T Consensus 335 vklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 335 FYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp EEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCCBCE
T ss_pred EEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCCeEE
Confidence 99999999888777777763 588999999999999999999999999987 677778889999999999999999999
Q ss_pred EEcCCCeEEEEECCCC--------------------------------------------eeEEEEeccCCCeEEEEEcC
Q 011924 407 TAEPADFVHVYDVKSG--------------------------------------------YEKEQEIDFFGEISGISFSP 442 (475)
Q Consensus 407 ~~~~dg~i~iwd~~~~--------------------------------------------~~~~~~~~~~~~i~~l~fsp 442 (475)
+|+.|++|+|||+..+ ..+..+.+|.+.|.+++|+|
T Consensus 414 Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp 493 (524)
T 2j04_B 414 AGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNE 493 (524)
T ss_dssp EEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECC
T ss_pred EEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCC
Confidence 9999999999985321 11122334667899999999
Q ss_pred CCC---eEEEEEecCCcceEEEEEeec
Q 011924 443 DTE---SLFIGVWDRTYGSLLEYGRCR 466 (475)
Q Consensus 443 dg~---~l~~~~~D~~~~~ll~~~~~~ 466 (475)
++. .|++|+.||.++ ++.+...|
T Consensus 494 ~~~~~~~lAsg~~~g~vr-lw~l~~~~ 519 (524)
T 2j04_B 494 TSAGGKCYAFSNSAGLLT-LEYLSLEH 519 (524)
T ss_dssp STTTTTEEEEECTTSEEE-EEECSCC-
T ss_pred CCCccHHHHhhccCceEE-EEEccccc
Confidence 964 888988888774 44444443
No 63
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.98 E-value=5.9e-29 Score=237.53 Aligned_cols=266 Identities=15% Similarity=0.218 Sum_probs=216.1
Q ss_pred eEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEE
Q 011924 136 LVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELIC 213 (475)
Q Consensus 136 l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~v 213 (475)
+-|+++ +.|....+++|++|+..+++...++...+ +...|++++| ++++|++|+.||.|++
T Consensus 31 l~WS~~-~~lAvg~D~tV~iWd~~tg~~~~~~~~~~----------------~~~~V~~v~~~~~~~~l~sgs~Dg~v~i 93 (318)
T 4ggc_A 31 VDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQ----------------PGEYISSVAWIKEGNYLAVGTSSAEVQL 93 (318)
T ss_dssp EEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCS----------------TTCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecC----------------CCCeEEEEEECCCCCEEEEEECCCcEEE
Confidence 346644 56777789999999999998877765443 2246999999 8899999999999999
Q ss_pred EeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe-eeeeee-ccccEEeccCCceEEEE
Q 011924 214 KHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ-LSKHFR-FPWPVNVSSSYCIILLC 291 (475)
Q Consensus 214 w~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~-~~~~~~-~~~~v~~s~~~~~l~~~ 291 (475)
|++.+.+.. ....+|...+.++.. ++. ++++++.++.+++|+..... .+..+. +...+.
T Consensus 94 w~~~~~~~~---~~~~~h~~~~~~~~~----~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 154 (318)
T 4ggc_A 94 WDVQQQKRL---RNMTSHSARVGSLSW----NSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVC----------- 154 (318)
T ss_dssp EETTTTEEE---EEEECCSSCEEEEEE----ETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE-----------
T ss_pred eecCCceeE---EEecCccceEEEeec----CCC-EEEEEecCCceEeeecCCCceeEEEEcCccCceE-----------
Confidence 999876543 556678877777655 455 49999999999999987653 334444 777788
Q ss_pred EEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCce----EEEeecCCCCeEEEEEecCCCE-E--EE
Q 011924 292 RLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT----IASLCGHLDFSFASAWHPNGVT-F--AT 364 (475)
Q Consensus 292 ~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~----~~~l~~h~~~v~~~~~sp~g~~-l--~t 364 (475)
++++++++++|++++.|+.|++||+++++. ......|.+.|.+++++|.+.. + ++
T Consensus 155 ------------------~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 216 (318)
T 4ggc_A 155 ------------------GLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 216 (318)
T ss_dssp ------------------EEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred ------------------EEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence 999999999999999999999999987653 4455678899999999996543 3 45
Q ss_pred EeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc--CCCeEEEEECCCCeeEEEEeccCCCeEEEEEcC
Q 011924 365 GNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE--PADFVHVYDVKSGYEKEQEIDFFGEISGISFSP 442 (475)
Q Consensus 365 ~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~--~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fsp 442 (475)
++.+++|++||.+. ...... ..+...+..+.|+|+++.+++++ .|+.|+|||+.+++++..+.+|.+.|.+++|+|
T Consensus 217 ~~~~~~i~lwd~~~-~~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp 294 (318)
T 4ggc_A 217 GTSDRHIRIWNVCS-GACLSA-VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP 294 (318)
T ss_dssp CTTTCEEEEEETTT-CCEEEE-EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred cCCCCEEEEEeccc-cccccc-ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 67889999999976 444444 34566899999999999887654 789999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCcc
Q 011924 443 DTESLFIGVWDRTYG 457 (475)
Q Consensus 443 dg~~l~~~~~D~~~~ 457 (475)
+|++|++|+.|+++.
T Consensus 295 dg~~l~S~s~D~~v~ 309 (318)
T 4ggc_A 295 DGATVASAAADETLR 309 (318)
T ss_dssp TSSCEEEEETTTEEE
T ss_pred CCCEEEEEecCCeEE
Confidence 999999999999875
No 64
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.8e-30 Score=257.17 Aligned_cols=282 Identities=13% Similarity=0.097 Sum_probs=220.3
Q ss_pred ccceeEEec-CCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEec
Q 011924 132 QLRNLVWAT-SKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF 207 (475)
Q Consensus 132 ~lr~l~~~~-~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~ 207 (475)
....+.|.+ +...+++. .++.|.+|+..+....... ...+...+...|.+++| ++++|++|+.
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~-------------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 131 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY-------------SSSLTYDCSSTVTQITMIPNFDAFAVSSK 131 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC-------------SCSEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc-------------ceeeeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 345556877 66666664 5789999997541100000 00011113457999999 7899999999
Q ss_pred CceEEEEeCC---CCCceE-----EE--eeecC--CCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-
Q 011924 208 QGELICKHLD---RPGVSF-----CS--RTTYD--DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR- 274 (475)
Q Consensus 208 dg~i~vw~~~---~~~~~~-----~~--~~~~~--~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~- 274 (475)
||.|++|++. ...... +. ..+.. +...+.++.+.+++++.. +++++.|+.|++||+++++.+..+.
T Consensus 132 dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 132 DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSL-LVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEE-EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 9999999995 222111 00 11112 566788888767888885 9999999999999999999888877
Q ss_pred --ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEee-cCCCCeE
Q 011924 275 --FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC-GHLDFSF 351 (475)
Q Consensus 275 --~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~-~h~~~v~ 351 (475)
+...|. +++|+|++++|++++.||.|++||+++++++..+. +|...|.
T Consensus 211 ~~h~~~v~-----------------------------~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (437)
T 3gre_A 211 SPRHGAVS-----------------------------SICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPIT 261 (437)
T ss_dssp CGGGCCEE-----------------------------EEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEE
T ss_pred CCCCCceE-----------------------------EEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceE
Confidence 467888 99999999999999999999999999999999886 7888999
Q ss_pred EEEEec----CCCEEEEEeCCCeEEEEECCCCCceEEEEec--------------------------CCCceEEEEEccC
Q 011924 352 ASAWHP----NGVTFATGNQDKTCRIWDLRNLSESVAVLKG--------------------------NLGAIRSIRYTSD 401 (475)
Q Consensus 352 ~~~~sp----~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~--------------------------~~~~v~~l~~spd 401 (475)
+++|+| ++.+|++|+.|++|++||+++ ++++..+.+ |...|++++|+ +
T Consensus 262 ~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~ 339 (437)
T 3gre_A 262 HVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N 339 (437)
T ss_dssp EEEECTTTCTTEEEEEEESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred EEEeccccCCCccEEEEEcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence 997765 678999999999999999987 677776664 44568889999 7
Q ss_pred CCEEEEEcCCCeEEEEECCCCeeEEEEec-------------------------------------cCCCeEEEEEcCC-
Q 011924 402 GRYMATAEPADFVHVYDVKSGYEKEQEID-------------------------------------FFGEISGISFSPD- 443 (475)
Q Consensus 402 g~~la~~~~dg~i~iwd~~~~~~~~~~~~-------------------------------------~~~~i~~l~fspd- 443 (475)
+++|++|+.|+.|++||+.+++....+.. |...|.+++|+++
T Consensus 340 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~ 419 (437)
T 3gre_A 340 DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVD 419 (437)
T ss_dssp TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESS
T ss_pred ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccC
Confidence 79999999999999999999887666654 7889999999998
Q ss_pred -CCeEEEEEecCCcce
Q 011924 444 -TESLFIGVWDRTYGS 458 (475)
Q Consensus 444 -g~~l~~~~~D~~~~~ 458 (475)
+.+|++|+.||.+..
T Consensus 420 ~~~~l~s~~~dG~I~i 435 (437)
T 3gre_A 420 ETPLLVACDNSGLIGI 435 (437)
T ss_dssp SSEEEEEEETTSCEEE
T ss_pred CceEEEEEcCCceEEE
Confidence 789999999998753
No 65
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.98 E-value=1.2e-30 Score=257.65 Aligned_cols=235 Identities=13% Similarity=0.126 Sum_probs=202.5
Q ss_pred cceeEEEEEEcCcEEEEEecCceEEEEeCCCCCc---eEEEeeecCCCCceeEEEEEeCCC----C---CeEEEEEeCCC
Q 011924 188 TQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGV---SFCSRTTYDDNAITNAVEIYGSPS----G---AVHFTASNNDC 257 (475)
Q Consensus 188 ~~~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~---~~~~~~~~~~~~~v~~l~~~~s~~----g---~~~l~s~s~dg 257 (475)
+..+|++++|..++|++|+.||.|++|++..... ......+..|...|.+++| +|+ + .. |++++.|+
T Consensus 15 h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~g~~~~~-l~s~~~dg 91 (397)
T 1sq9_A 15 HDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV--LQAIERDAFELCL-VATTSFSG 91 (397)
T ss_dssp SSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEE--EEEEETTTEEEEE-EEEEETTS
T ss_pred hhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEE--ecccccCCccccE-EEEEcCCC
Confidence 3458999999779999999999999999987660 0012445578899999999 888 7 75 89999999
Q ss_pred eEEEEECCCCee-----eeeee-c-----cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEEC----CCCcE-EE
Q 011924 258 GVRDFDMGKYQL-----SKHFR-F-----PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQS----PDGKL-LI 321 (475)
Q Consensus 258 ~v~iwd~~~~~~-----~~~~~-~-----~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~s----p~g~~-l~ 321 (475)
.|++|++.+++. ...+. + ...+. +++|+ |++++ |+
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~~~~~~l~ 142 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW-----------------------------ALKWGASNDRLLSHRLV 142 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE-----------------------------EEEEECCC----CEEEE
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEE-----------------------------EEEEeeccCCCCceEEE
Confidence 999999988775 55555 4 37788 99999 99999 99
Q ss_pred EEeCCCcEEEEECCC------CceEE-----Eee-------cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceE
Q 011924 322 IVGDNPDGLLVDSMT------GKTIA-----SLC-------GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESV 383 (475)
Q Consensus 322 ~~~~dg~i~iwd~~~------~~~~~-----~l~-------~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~ 383 (475)
+++.++.|++||+++ ++.+. .+. .|...+.+++|+|++ +|++++.|+.|++||+++ .+++
T Consensus 143 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~ 220 (397)
T 1sq9_A 143 ATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST-LRPL 220 (397)
T ss_dssp EEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT-TEEE
T ss_pred EEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC-Ccee
Confidence 999999999999998 66665 774 488999999999999 999999999999999987 7888
Q ss_pred EEEec---C---CCceEEEEEccCCCEEEEEcCC---CeEEEEECCCCeeEEEEec-------------cCCCeEEEEEc
Q 011924 384 AVLKG---N---LGAIRSIRYTSDGRYMATAEPA---DFVHVYDVKSGYEKEQEID-------------FFGEISGISFS 441 (475)
Q Consensus 384 ~~~~~---~---~~~v~~l~~spdg~~la~~~~d---g~i~iwd~~~~~~~~~~~~-------------~~~~i~~l~fs 441 (475)
..+.. | ...|.+++|+|++++|++++.| +.|++||+.++..+..+.. |.+.|.+++|+
T Consensus 221 ~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 300 (397)
T 1sq9_A 221 YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN 300 (397)
T ss_dssp EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred EEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEEC
Confidence 89988 8 8999999999999999999999 9999999999999888888 99999999999
Q ss_pred CCCCeEEEEEecCCc
Q 011924 442 PDTESLFIGVWDRTY 456 (475)
Q Consensus 442 pdg~~l~~~~~D~~~ 456 (475)
|++++|++++.|+.+
T Consensus 301 ~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 301 DSGETLCSAGWDGKL 315 (397)
T ss_dssp SSSSEEEEEETTSEE
T ss_pred CCCCEEEEEeCCCeE
Confidence 999999999988765
No 66
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=7.7e-30 Score=255.96 Aligned_cols=281 Identities=9% Similarity=0.069 Sum_probs=210.5
Q ss_pred ceeEEecCCCeEEEe-cCCeEEEEecCCCCce---------EEEeccCCCCCCCCCCCCcccc-ccceeEEEEEE--cC-
Q 011924 134 RNLVWATSKHDVYLM-SHFSVIHWSSLTSSRS---------QVLNVSGHVAPSEKHPGSLLEG-FTQTQVSTLAV--KD- 199 (475)
Q Consensus 134 r~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~--~~- 199 (475)
..+.|+++...|++. .++.|.+|+..++... .+..+.+|.... ..+.. ....+|.+++| ++
T Consensus 32 ~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~-----~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 32 STVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEF-----DYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEE-----EGGGTEEECCCCCEEEECCCCS
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccc-----cccccccccCceEEEEEcCCCC
Confidence 445577777777775 5799999998766521 111222221000 00000 00146899999 44
Q ss_pred -cEEEEEecCceEEEEeCCCCCce------------------------------------E-EEeeecCCCCceeEEEEE
Q 011924 200 -KLLVAGGFQGELICKHLDRPGVS------------------------------------F-CSRTTYDDNAITNAVEIY 241 (475)
Q Consensus 200 -~~lvsg~~dg~i~vw~~~~~~~~------------------------------------~-~~~~~~~~~~~v~~l~~~ 241 (475)
.+|++|+.||.|++|++...... . ......+|...|.+++|
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~- 185 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI- 185 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE-
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE-
Confidence 68999999999999998653221 0 01224679999999999
Q ss_pred eCCCCCeEEEEEeCCCeEEEEECCC-Ceeeeee--------eccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEE
Q 011924 242 GSPSGAVHFTASNNDCGVRDFDMGK-YQLSKHF--------RFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSS 312 (475)
Q Consensus 242 ~s~~g~~~l~s~s~dg~v~iwd~~~-~~~~~~~--------~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~ 312 (475)
+|+++. |++| .|+.|++||+.+ ++....+ .+...+. +++
T Consensus 186 -~~~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~-----------------------------~~~ 233 (447)
T 3dw8_B 186 -NSDYET-YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVIT-----------------------------AAE 233 (447)
T ss_dssp -CTTSSE-EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEE-----------------------------EEE
T ss_pred -cCCCCE-EEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceE-----------------------------EEE
Confidence 999986 7787 799999999984 4444432 2566677 999
Q ss_pred ECCCC-cEEEEEeCCCcEEEEECCCCce----EEEeecCCC------------CeEEEEEecCCCEEEEEeCCCeEEEEE
Q 011924 313 QSPDG-KLLIIVGDNPDGLLVDSMTGKT----IASLCGHLD------------FSFASAWHPNGVTFATGNQDKTCRIWD 375 (475)
Q Consensus 313 ~sp~g-~~l~~~~~dg~i~iwd~~~~~~----~~~l~~h~~------------~v~~~~~sp~g~~l~t~s~dg~v~iwd 375 (475)
|+|++ ++|++++.|+.|++||+++++. +..+.+|.. .|.+++|+|++++|++++. ++|++||
T Consensus 234 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd 312 (447)
T 3dw8_B 234 FHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWD 312 (447)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEE
T ss_pred ECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEe
Confidence 99998 9999999999999999999887 788888876 8999999999999999999 9999999
Q ss_pred CCCCCceEEEEecCCCc---------------eEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEe-----------
Q 011924 376 LRNLSESVAVLKGNLGA---------------IRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI----------- 429 (475)
Q Consensus 376 ~~~~~~~~~~~~~~~~~---------------v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~----------- 429 (475)
++..++++..+.+|... +..++|+|+|++|++|+.|+.|+|||+.++..+. +.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~ 391 (447)
T 3dw8_B 313 LNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTV 391 (447)
T ss_dssp TTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCB
T ss_pred CCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccc
Confidence 98657788888887532 2349999999999999999999999999887653 22
Q ss_pred ----------------------ccCCCeEEEEEcCCCCeEEEEEecC
Q 011924 430 ----------------------DFFGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 430 ----------------------~~~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
.+...|..++|+|++++|++++.++
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 392 LKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp CCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred cCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce
Confidence 2335688999999999999998874
No 67
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.98 E-value=7.2e-30 Score=245.33 Aligned_cols=200 Identities=16% Similarity=0.208 Sum_probs=181.2
Q ss_pred EeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC-----Ceeeeeee-ccccEEeccCCceEEEEEEeeccc
Q 011924 225 SRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-----YQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMT 298 (475)
Q Consensus 225 ~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~-----~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~ 298 (475)
...+.+|.+.|++++| +|++..+|++|+.|++|++|++.. +..+..+. |...|.
T Consensus 10 ~~~l~gH~~~V~~l~~--~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~------------------ 69 (319)
T 3frx_A 10 RGTLEGHNGWVTSLAT--SAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ------------------ 69 (319)
T ss_dssp EEEECCCSSCEEEEEE--CSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEE------------------
T ss_pred EEEEccccceEEEEEc--cCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEE------------------
Confidence 4567899999999999 987755699999999999999854 23445555 778888
Q ss_pred ceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCC
Q 011924 299 EKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 378 (475)
Q Consensus 299 ~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~ 378 (475)
+++|+|+|++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||++
T Consensus 70 -----------~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~- 137 (319)
T 3frx_A 70 -----------DCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK- 137 (319)
T ss_dssp -----------EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-
T ss_pred -----------EEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-
Confidence 99999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCceEEEEecCCCceEEEEEccC------CCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEe
Q 011924 379 LSESVAVLKGNLGAIRSIRYTSD------GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 379 ~~~~~~~~~~~~~~v~~l~~spd------g~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
+.++..+.+|...|.+++|+|. +.+|++++.|+.|++||+.++.....+.+|.+.|.+++|+|+|++|++|+.
T Consensus 138 -~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 138 -GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp -SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred -CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 5678889999999999999995 458999999999999999999988889999999999999999999999999
Q ss_pred cCCcc
Q 011924 453 DRTYG 457 (475)
Q Consensus 453 D~~~~ 457 (475)
|+++.
T Consensus 217 dg~i~ 221 (319)
T 3frx_A 217 DGEIM 221 (319)
T ss_dssp TCEEE
T ss_pred CCeEE
Confidence 98764
No 68
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.6e-31 Score=269.60 Aligned_cols=226 Identities=7% Similarity=-0.038 Sum_probs=180.0
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceEE-EeeecCCCCceeEEEEEeCCC------CCeEEEEEeCCCeEEEEECCCCeee
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSFC-SRTTYDDNAITNAVEIYGSPS------GAVHFTASNNDCGVRDFDMGKYQLS 270 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~~-~~~~~~~~~~v~~l~~~~s~~------g~~~l~s~s~dg~v~iwd~~~~~~~ 270 (475)
+++.|++|+.||+|++|++........ ...+.+|.+.|..++| +|+ +. +|++++.||+|++||+.++...
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~w--sp~~~~~~~~~-~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKW--HEGCHAPHLVG-CLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEE--CSSCCCSSSSC-EEEEEETTSCEEEEECCCCSSS
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEE--CCCCCCCCCCc-eEEEEecCCeEEEEEcCCCccc
Confidence 456789999999999999976553221 2334567788999999 886 34 5999999999999999765421
Q ss_pred -----------eeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCC-
Q 011924 271 -----------KHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTG- 337 (475)
Q Consensus 271 -----------~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~- 337 (475)
..+. +..+|. +++|+|++ .|++|+.||+|++||++++
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~-----------------------------sv~~s~~~-~lasgs~DgtV~lWD~~~~~ 298 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLIT-----------------------------TFDFLSPT-TVVCGFKNGFVAEFDLTDPE 298 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEE-----------------------------EEEESSSS-EEEEEETTSEEEEEETTBCS
T ss_pred cccceeecCceEEEEcCCCCEE-----------------------------EEEecCCC-eEEEEeCCCEEEEEECCCCC
Confidence 1222 455666 99999864 8999999999999999976
Q ss_pred ceEEEeecCCCCeEEE--EEecCC-CEEEEEeCCCeEEEEECCCCCceEEEEecCCC--ceEEEEEccCCCEEEEEcCCC
Q 011924 338 KTIASLCGHLDFSFAS--AWHPNG-VTFATGNQDKTCRIWDLRNLSESVAVLKGNLG--AIRSIRYTSDGRYMATAEPAD 412 (475)
Q Consensus 338 ~~~~~l~~h~~~v~~~--~~sp~g-~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~--~v~~l~~spdg~~la~~~~dg 412 (475)
.+...+.+|...|.++ +|+|+| ++||||+.|++|+|||+++ .+++..+.+|.. .|.+++|+|+++.|++++.|+
T Consensus 299 ~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 299 VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS
T ss_pred CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCcccccccccccCcccceEeCCCcCeEEEeCCCC
Confidence 4556789999999999 578888 8999999999999999987 566666666543 588999999999999999999
Q ss_pred eEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 413 FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 413 ~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+|++||++++.++..+.+|.+.|.+++|||+|++|++|+.|+++.
T Consensus 378 tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 378 SLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp EEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred cEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 999999999988888889999999999999999999999999874
No 69
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=1.6e-30 Score=258.95 Aligned_cols=227 Identities=13% Similarity=0.120 Sum_probs=192.7
Q ss_pred EEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeee
Q 011924 194 TLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHF 273 (475)
Q Consensus 194 ~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~ 273 (475)
+++.++++|++|+.+|.|++|++...... .....+ ..+....+ +|+++. |++++.|+.|++||+.+++....+
T Consensus 63 ~~s~~g~~l~~~~~d~~v~i~d~~~~~~~---~~~~~~-~~~~~~~~--~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 63 TFEKVGSHLYKARLDGHDFLFNTIIRDGS---KMLKRA-DYTAVDTA--KLQMRR-FILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp EEEEEETTEEEEEETTEEEEEECCSEETT---TTSCSC-CEEEEEEE--CSSSCE-EEEEETTSCEEEECTTSCEEEEET
T ss_pred eeeecCCeEEEEEcCCcEEEEEeccccee---eEEecC-CceEEEEE--ecCCCE-EEEEECCCCEEEEeCCCcceeeec
Confidence 34448999999999999999998764432 222333 34444455 899986 999999999999999999888876
Q ss_pred e-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEE
Q 011924 274 R-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFA 352 (475)
Q Consensus 274 ~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~ 352 (475)
. |...|. +++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+
T Consensus 136 ~~h~~~v~-----------------------------~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~ 186 (420)
T 3vl1_A 136 QAHVSEIT-----------------------------KLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTD 186 (420)
T ss_dssp TSSSSCEE-----------------------------EEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEE
T ss_pred ccccCccE-----------------------------EEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEE
Confidence 4 888999 9999999999999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecC---CC---------------------ceEEEEEccCCCEEEEE
Q 011924 353 SAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN---LG---------------------AIRSIRYTSDGRYMATA 408 (475)
Q Consensus 353 ~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~---~~---------------------~v~~l~~spdg~~la~~ 408 (475)
++|+|++++|++++.|++|++||+++ ++++..+..+ .. .+.+++|+|+|++|+++
T Consensus 187 ~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (420)
T 3vl1_A 187 IAIIDRGRNVLSASLDGTIRLWECGT-GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG 265 (420)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE
T ss_pred EEEcCCCCEEEEEcCCCcEEEeECCC-CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE
Confidence 99999999999999999999999987 7777777642 23 44445568899999999
Q ss_pred cCCCeEEEEECCCCeeEEEEec-cCCCeEEEEEcCCCC-eEEEEEecCCcc
Q 011924 409 EPADFVHVYDVKSGYEKEQEID-FFGEISGISFSPDTE-SLFIGVWDRTYG 457 (475)
Q Consensus 409 ~~dg~i~iwd~~~~~~~~~~~~-~~~~i~~l~fspdg~-~l~~~~~D~~~~ 457 (475)
+.||.|++||++++..+..+.. |.+.|.+++|+|+++ +|++|+.|+.+.
T Consensus 266 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~ 316 (420)
T 3vl1_A 266 HVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLA 316 (420)
T ss_dssp ETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred cCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEE
Confidence 9999999999999887777654 778999999999999 999999987653
No 70
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.6e-30 Score=277.53 Aligned_cols=300 Identities=12% Similarity=0.073 Sum_probs=219.8
Q ss_pred cceeEEecCCCeEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 133 LRNLVWATSKHDVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 133 lr~l~~~~~~~~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
.+.+.|++ ...|+. ..++.|++|+..+++....+. +...|++++| ++++|++|+.+|
T Consensus 61 V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-------------------~~~~V~~v~~sp~g~~l~sgs~dg 120 (902)
T 2oaj_A 61 IKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-------------------VPGKITSIDTDASLDWMLIGLQNG 120 (902)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-------------------CSSCEEEEECCTTCSEEEEEETTS
T ss_pred EEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-------------------CCCCEEEEEECCCCCEEEEEcCCC
Confidence 45666777 444555 467999999988876544332 1136899999 899999999999
Q ss_pred eEEEEeCCCCCceE-EE-------eeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeec------
Q 011924 210 ELICKHLDRPGVSF-CS-------RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF------ 275 (475)
Q Consensus 210 ~i~vw~~~~~~~~~-~~-------~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~------ 275 (475)
.|++|++....... .. .....|.+.|.+++| +|++..++++|+.|+.| +||+++++.+..+..
T Consensus 121 ~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~--sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~ 197 (902)
T 2oaj_A 121 SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQW--NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFA 197 (902)
T ss_dssp CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEE--ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTC
T ss_pred cEEEEECCCCccccceeccccccccccccCCCCeEEEEE--ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcC
Confidence 99999998654321 11 223568899999999 99765568999999999 999999888776652
Q ss_pred ----------------cccEEeccCCceEE------EEEEeecccceEEEE----------------------eeeeeeE
Q 011924 276 ----------------PWPVNVSSSYCIIL------LCRLLNFMTEKVIIC----------------------LLCLQHS 311 (475)
Q Consensus 276 ----------------~~~v~~s~~~~~l~------~~~v~d~~~~~~~~~----------------------~~~i~~~ 311 (475)
...+.|+|++..++ .+++||..+++.+.. ...|.++
T Consensus 198 ~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v 277 (902)
T 2oaj_A 198 PGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKV 277 (902)
T ss_dssp CCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEE
T ss_pred CCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEE
Confidence 23456999998885 589999988776542 1147778
Q ss_pred EEC----CCC-cEEEEEeC-------------------------------------------------------------
Q 011924 312 SQS----PDG-KLLIIVGD------------------------------------------------------------- 325 (475)
Q Consensus 312 ~~s----p~g-~~l~~~~~------------------------------------------------------------- 325 (475)
+|+ |++ .+|++|+.
T Consensus 278 ~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~ 357 (902)
T 2oaj_A 278 YWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPY 357 (902)
T ss_dssp EEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSH
T ss_pred EEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCC
Confidence 884 443 34444433
Q ss_pred ---------------CCcEEEEECCCCceEEE-----------------------------------------eecCCCC
Q 011924 326 ---------------NPDGLLVDSMTGKTIAS-----------------------------------------LCGHLDF 349 (475)
Q Consensus 326 ---------------dg~i~iwd~~~~~~~~~-----------------------------------------l~~h~~~ 349 (475)
++.|++|++.+|..... +.+|...
T Consensus 358 ~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~ 437 (902)
T 2oaj_A 358 FAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRT 437 (902)
T ss_dssp HHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCC
T ss_pred cCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCC
Confidence 34455555544432211 1233334
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEECCCCCce----EEEE--e-----cCCCceEEEEEccCCCEEEEEcCCCeEEEEE
Q 011924 350 SFASAWHPNGVTFATGNQDKTCRIWDLRNLSES----VAVL--K-----GNLGAIRSIRYTSDGRYMATAEPADFVHVYD 418 (475)
Q Consensus 350 v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~----~~~~--~-----~~~~~v~~l~~spdg~~la~~~~dg~i~iwd 418 (475)
+.+++|+|++++||+|+.|++|++||+... .. ...+ . +|...|++++|+|+|++||+|+.||+|+|||
T Consensus 438 v~sv~~spdg~~laSgs~DgtVrlWd~~~g-~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd 516 (902)
T 2oaj_A 438 KRQKLPAEYGTAFITGHSNGSVRIYDASHG-DIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFK 516 (902)
T ss_dssp CCCCCCCSEEEEEEEEETTSEEEEEESSCC-TTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred CCcccccccCcEEEEecCCCcEEEEECCCc-cccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEE
Confidence 444566789999999999999999999763 21 1111 1 6888999999999999999999999999999
Q ss_pred CCCCe---------------------------------------------eEEEEeccCCCeEEEEEcCCCCeEEEEEec
Q 011924 419 VKSGY---------------------------------------------EKEQEIDFFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 419 ~~~~~---------------------------------------------~~~~~~~~~~~i~~l~fspdg~~l~~~~~D 453 (475)
+.+++ ++..+..|.+.|++++||||| +||+|+.|
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D 595 (902)
T 2oaj_A 517 YEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAA 595 (902)
T ss_dssp EEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETT
T ss_pred ecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCC
Confidence 97652 355667799999999999999 99999999
Q ss_pred CCcc
Q 011924 454 RTYG 457 (475)
Q Consensus 454 ~~~~ 457 (475)
+++.
T Consensus 596 ~tv~ 599 (902)
T 2oaj_A 596 GSLM 599 (902)
T ss_dssp SEEE
T ss_pred CcEE
Confidence 8864
No 71
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=6.6e-29 Score=259.17 Aligned_cols=297 Identities=11% Similarity=0.046 Sum_probs=225.0
Q ss_pred ceeEEecCCC-eEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--c-CcEEEEEecC
Q 011924 134 RNLVWATSKH-DVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--K-DKLLVAGGFQ 208 (475)
Q Consensus 134 r~l~~~~~~~-~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~-~~~lvsg~~d 208 (475)
..+.|.+... .++. ..++.+.+|+..+++....+ .++.. ....|.+++| + +++|++|+.+
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~--~~~~~-------------~~~~v~~~~~~~~~~~~l~~~~~d 228 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD--RTHHK-------------QGSFVRDVEFSPDSGEFVITVGSD 228 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE--CSSSC-------------TTCCEEEEEECSTTCCEEEEEETT
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee--cccCC-------------CCceEEEEEECCCCCCEEEEEeCC
Confidence 3444666654 3444 45689999997665543332 21100 1126899999 6 8899999999
Q ss_pred ceEEEEeCCCCCceEEEeee-c---CCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc-----cc-
Q 011924 209 GELICKHLDRPGVSFCSRTT-Y---DDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP-----WP- 278 (475)
Q Consensus 209 g~i~vw~~~~~~~~~~~~~~-~---~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-----~~- 278 (475)
|.|++|++...... ..+ . .|...|.+++| + ++.. +++++.|+.|++||+.+++.+..+... ..
T Consensus 229 g~i~vwd~~~~~~~---~~~~~~~~~~~~~v~~~~~--~-~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 301 (615)
T 1pgu_A 229 RKISCFDGKSGEFL---KYIEDDQEPVQGGIFALSW--L-DSQK-FATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQ 301 (615)
T ss_dssp CCEEEEETTTCCEE---EECCBTTBCCCSCEEEEEE--S-SSSE-EEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCE
T ss_pred CeEEEEECCCCCEe---EEecccccccCCceEEEEE--c-CCCE-EEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCce
Confidence 99999999876544 333 4 78899999999 8 7775 899999999999999988887766632 11
Q ss_pred --EEeccCCceEE------EEEEeecccceEEEEe---------------------------------------------
Q 011924 279 --VNVSSSYCIIL------LCRLLNFMTEKVIICL--------------------------------------------- 305 (475)
Q Consensus 279 --v~~s~~~~~l~------~~~v~d~~~~~~~~~~--------------------------------------------- 305 (475)
+.++ ++..++ .+++||..+++.+...
T Consensus 302 ~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~ 380 (615)
T 1pgu_A 302 VGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN 380 (615)
T ss_dssp EEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC
T ss_pred eEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE
Confidence 1121 222221 2344444333222111
Q ss_pred ------------------------------------------------------------------eeeeeEEECCCCcE
Q 011924 306 ------------------------------------------------------------------LCLQHSSQSPDGKL 319 (475)
Q Consensus 306 ------------------------------------------------------------------~~i~~~~~sp~g~~ 319 (475)
..+.+++|+ +++
T Consensus 381 ~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 458 (615)
T 1pgu_A 381 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNY 458 (615)
T ss_dssp CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSE
T ss_pred CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCE
Confidence 123344444 667
Q ss_pred EEEEeC-CCcEEEEECCCCceE-EEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEec-CCCceEEE
Q 011924 320 LIIVGD-NPDGLLVDSMTGKTI-ASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG-NLGAIRSI 396 (475)
Q Consensus 320 l~~~~~-dg~i~iwd~~~~~~~-~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~-~~~~v~~l 396 (475)
|++++. ++.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.|+.|++||+.+ ++++..+.+ |...|+++
T Consensus 459 l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~h~~~v~~~ 537 (615)
T 1pgu_A 459 VAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS-REVKTSRWAFRTSKINAI 537 (615)
T ss_dssp EEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEECCSCCCSSCEEEE
T ss_pred EEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC-CcceeEeecCCCCceeEE
Confidence 777887 888999998877655 66778999999999999999999999999999999977 788888887 99999999
Q ss_pred EEcc----------CCCEEEEEcCCCeEEEEECCCC-eeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 397 RYTS----------DGRYMATAEPADFVHVYDVKSG-YEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 397 ~~sp----------dg~~la~~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+|+| ++++|++++.|+.|++||+.++ ..+..+..|.+.|.+++|+|+++ |++++.|+.+.
T Consensus 538 ~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~ 608 (615)
T 1pgu_A 538 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 608 (615)
T ss_dssp EECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEE
T ss_pred EEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEE
Confidence 9999 9999999999999999999987 67777888999999999999999 99999998774
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=2.2e-29 Score=284.36 Aligned_cols=301 Identities=16% Similarity=0.203 Sum_probs=249.4
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE----cCcEEEEEec
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV----KDKLLVAGGF 207 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~----~~~~lvsg~~ 207 (475)
...+.|+++...+++. .++.|.+|+..+++....+. + +...|.+++| ++.++++|+.
T Consensus 660 v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--~----------------~~~~v~~~~~~~~~~~~~l~sg~~ 721 (1249)
T 3sfz_A 660 VLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD--E----------------HSEQVNCCHFTNKSNHLLLATGSN 721 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--C----------------CSSCEEEEEECSSSSCCEEEEEET
T ss_pred EEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc--C----------------CCCcEEEEEEecCCCceEEEEEeC
Confidence 3445577777777765 56899999998876544432 1 2346889999 4568999999
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeec------------
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF------------ 275 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~------------ 275 (475)
||.|++|++...... ....+|.+.|++++| +|+++. +++++.||+|++||+.+++....+..
T Consensus 722 d~~v~vwd~~~~~~~---~~~~~h~~~v~~~~~--sp~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1249)
T 3sfz_A 722 DFFLKLWDLNQKECR---NTMFGHTNSVNHCRF--SPDDEL-LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPE 795 (1249)
T ss_dssp TSCEEEEETTSSSEE---EEECCCSSCEEEEEE--CSSTTE-EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------
T ss_pred CCeEEEEECCCcchh---heecCCCCCEEEEEE--ecCCCE-EEEEECCCeEEEEeCCCCcccceecccccccccCCccc
Confidence 999999999876544 566789999999999 999986 99999999999999998877665542
Q ss_pred -----cccEEeccCCceEE-----EEEEeecccceEEEEee-----eeeeEEECCCCcEEEEEeCCCcEEEEECCCCceE
Q 011924 276 -----PWPVNVSSSYCIIL-----LCRLLNFMTEKVIICLL-----CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI 340 (475)
Q Consensus 276 -----~~~v~~s~~~~~l~-----~~~v~d~~~~~~~~~~~-----~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~ 340 (475)
...+.|++++..++ .+.+|+..++....... .+.+++|+|+++++++++.++.|++|++.++..+
T Consensus 796 ~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 796 DVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV 875 (1249)
T ss_dssp CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEE
T ss_pred cccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 23455889988885 68899999888776554 6789999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCC----------------------------ceEEEE------
Q 011924 341 ASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS----------------------------ESVAVL------ 386 (475)
Q Consensus 341 ~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~----------------------------~~~~~~------ 386 (475)
..+.+|...|.+++|+|++++|++++.|++|++||+.... ..+...
T Consensus 876 ~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1249)
T 3sfz_A 876 ADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ 955 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCC
T ss_pred eecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcce
Confidence 9999999999999999999999999999999999964210 000011
Q ss_pred --ecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 387 --KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 387 --~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
..+...+.+++|+|+|+++++|+.+|.|++||+.++.....+..|.+.|.+++|+|+|++|++++.|+.+.
T Consensus 956 ~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~ 1028 (1249)
T 3sfz_A 956 IDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQ 1028 (1249)
T ss_dssp EEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEE
T ss_pred EEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 11245789999999999999999999999999999998888889999999999999999999999998764
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=3.9e-29 Score=270.04 Aligned_cols=268 Identities=12% Similarity=0.097 Sum_probs=228.8
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
.+.+.|.++...|++. .++.|.+|+..+++....+. + +..+|.+++| ++++|++|+.+|
T Consensus 16 v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~--~----------------~~~~v~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ--V----------------TETPVRAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE--C----------------CSSCEEEEEEEGGGTEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe--c----------------CCCcEEEEEEeCCCCEEEEEeCCC
Confidence 4556688877777775 46899999987776544332 1 2346899999 899999999999
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC-eeeeeee-ccccEEeccCCce
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-QLSKHFR-FPWPVNVSSSYCI 287 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~-~~~~~~~-~~~~v~~s~~~~~ 287 (475)
.|++|++.+.... .....|.+.|.+++| +|+++. +++++.||+|++|++.++ .....+. +..++.
T Consensus 78 ~i~vw~~~~~~~~---~~~~~~~~~v~~~~~--s~~~~~-l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~------- 144 (814)
T 3mkq_A 78 RIRVFNYNTGEKV---VDFEAHPDYIRSIAV--HPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM------- 144 (814)
T ss_dssp EEEEEETTTCCEE---EEEECCSSCEEEEEE--CSSSSE-EEEEETTSEEEEEEGGGTSEEEEEEECCSSCEE-------
T ss_pred eEEEEECCCCcEE---EEEecCCCCEEEEEE--eCCCCE-EEEEcCCCEEEEEECCCCceEEEEEcCCCCcEE-------
Confidence 9999999876544 455678899999999 999986 889999999999999876 5555555 778888
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECCCCceEEEeecCC-CCeEEEEEec--CCCEEE
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL-DFSFASAWHP--NGVTFA 363 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~-~~v~~~~~sp--~g~~l~ 363 (475)
+++|+| ++..|++++.++.|++||+.++.....+..+. ..+.+++|+| ++++|+
T Consensus 145 ----------------------~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 145 ----------------------CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp ----------------------EEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred ----------------------EEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 999999 89999999999999999999888877777655 8899999999 999999
Q ss_pred EEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCC
Q 011924 364 TGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 443 (475)
Q Consensus 364 t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspd 443 (475)
+++.||+|++||++. ++++..+.+|...|++++|+|+|++|++++.||.|++||+.++..+..+..+...+.+++|+|+
T Consensus 203 ~~~~dg~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 281 (814)
T 3mkq_A 203 TASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPT 281 (814)
T ss_dssp EECTTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTT
T ss_pred EEeCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccC
Confidence 999999999999977 7889999999999999999999999999999999999999999999898889999999999999
Q ss_pred CCeE-EEEEecC
Q 011924 444 TESL-FIGVWDR 454 (475)
Q Consensus 444 g~~l-~~~~~D~ 454 (475)
|..+ ++++.|+
T Consensus 282 ~~~~~~~~~~~~ 293 (814)
T 3mkq_A 282 GRKNYIASGFDN 293 (814)
T ss_dssp CGGGEEEEEETT
T ss_pred CCceEEEEEeCC
Confidence 9742 4444443
No 74
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=6.3e-30 Score=256.19 Aligned_cols=237 Identities=15% Similarity=0.179 Sum_probs=199.5
Q ss_pred ceeEEEEEE--c-CcEEEEEecCceEEEEeCCCC-------CceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCe
Q 011924 189 QTQVSTLAV--K-DKLLVAGGFQGELICKHLDRP-------GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCG 258 (475)
Q Consensus 189 ~~~v~~l~~--~-~~~lvsg~~dg~i~vw~~~~~-------~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~ 258 (475)
...|+++++ + +.+|++|+.+|.|++|++... +.......+..|...+.+++| +|++..+|++|+.||+
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW--NPNLNGYLLSASDDHT 205 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEE--CTTSTTEEEEECTTSC
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEe--CCCCCCeEEEEeCCCe
Confidence 347888888 3 579999999999999999752 111112455678889999999 9998845999999999
Q ss_pred EEEEECCCCee-------eeee-eccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcE
Q 011924 259 VRDFDMGKYQL-------SKHF-RFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDG 329 (475)
Q Consensus 259 v~iwd~~~~~~-------~~~~-~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i 329 (475)
|++|++.++.. ...+ .+...|. +++|+| ++.+|++++.++.|
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-----------------------------~v~~~p~~~~~l~s~~~dg~i 256 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVE-----------------------------DVAWHLLHESLFGSVADDQKL 256 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEE-----------------------------EEEECSSCTTEEEEEETTSEE
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEe-----------------------------eeEEeCCCCCEEEEEeCCCeE
Confidence 99999987322 2233 2666777 999999 78899999999999
Q ss_pred EEEECCCC---ceEEEeecCCCCeEEEEEecCCC-EEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCC-E
Q 011924 330 LLVDSMTG---KTIASLCGHLDFSFASAWHPNGV-TFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR-Y 404 (475)
Q Consensus 330 ~iwd~~~~---~~~~~l~~h~~~v~~~~~sp~g~-~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~-~ 404 (475)
++||++++ +++..+..|...|.+++|+|++. +|++|+.||+|++||+++...++..+..|...|++++|+|+++ +
T Consensus 257 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 336 (430)
T ss_dssp EEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred EEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCE
Confidence 99999977 57788889999999999999886 7899999999999999987788999999999999999999995 7
Q ss_pred EEEEcCCCeEEEEECCC--------------CeeEEEEeccCCCeEEEEEcCCCC-eEEEEEecCCc
Q 011924 405 MATAEPADFVHVYDVKS--------------GYEKEQEIDFFGEISGISFSPDTE-SLFIGVWDRTY 456 (475)
Q Consensus 405 la~~~~dg~i~iwd~~~--------------~~~~~~~~~~~~~i~~l~fspdg~-~l~~~~~D~~~ 456 (475)
|++++.|+.|+|||+.. ...+....+|.+.|.+++|+|+++ +|++++.|+.+
T Consensus 337 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 337 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIM 403 (430)
T ss_dssp EEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred EEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCE
Confidence 99999999999999986 245666667889999999999999 78888888765
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=4.7e-29 Score=251.91 Aligned_cols=226 Identities=15% Similarity=0.158 Sum_probs=203.4
Q ss_pred eEEEEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeee
Q 011924 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (475)
Q Consensus 191 ~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~ 270 (475)
.+.++++++++|++|+.||.|++|++.+.... ..+.+|.+.|.+++| +|++ ++++|+.||+|++||+.+++.+
T Consensus 124 v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~---~~~~~h~~~V~~l~~--~~~~--~l~s~s~dg~i~vwd~~~~~~~ 196 (464)
T 3v7d_B 124 VITCLQFEDNYVITGADDKMIRVYDSINKKFL---LQLSGHDGGVWALKY--AHGG--ILVSGSTDRTVRVWDIKKGCCT 196 (464)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTTEEE---EEECCCSSCEEEEEE--CSTT--EEEEEETTSCEEEEETTTTEEE
T ss_pred cEEEEEECCCEEEEEcCCCcEEEEECCCCcEE---EEEeCCCcCEEEEEE--cCCC--EEEEEeCCCCEEEEECCCCcEE
Confidence 46788999999999999999999999875533 556789999999999 8887 5999999999999999999998
Q ss_pred eeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEEC--CCCcEEEEEeCCCcEEEEECCCCce--------
Q 011924 271 KHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQS--PDGKLLIIVGDNPDGLLVDSMTGKT-------- 339 (475)
Q Consensus 271 ~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~s--p~g~~l~~~~~dg~i~iwd~~~~~~-------- 339 (475)
..+. +..++. +++|+ ++++++++++.|+.|++||++++..
T Consensus 197 ~~~~~h~~~v~-----------------------------~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~ 247 (464)
T 3v7d_B 197 HVFEGHNSTVR-----------------------------CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 247 (464)
T ss_dssp EEECCCSSCEE-----------------------------EEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------C
T ss_pred EEECCCCCccE-----------------------------EEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccC
Confidence 8887 888898 88888 5889999999999999999987652
Q ss_pred ---------------EEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCE
Q 011924 340 ---------------IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 404 (475)
Q Consensus 340 ---------------~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~ 404 (475)
+..+.+|...+.++ +|+++++++|+.|++|++||+++ .+++..+.+|...|.+++|+|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (464)
T 3v7d_B 248 DYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERKR 324 (464)
T ss_dssp CSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTTE
T ss_pred CcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCCE
Confidence 55677898888876 67889999999999999999987 7889999999999999999999999
Q ss_pred EEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 405 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 405 la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
|++|+.|+.|++||+.++..+..+..|.+.|.+++|+ +.+|++|+.|+++.
T Consensus 325 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 325 CISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIR 375 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEE
T ss_pred EEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEE
Confidence 9999999999999999999999999999999999998 57999999998764
No 76
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=2.6e-30 Score=259.38 Aligned_cols=228 Identities=16% Similarity=0.161 Sum_probs=186.2
Q ss_pred eeEEEEEE---cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCC-CCeEEEEEeCCCeEEEEECC
Q 011924 190 TQVSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS-GAVHFTASNNDCGVRDFDMG 265 (475)
Q Consensus 190 ~~v~~l~~---~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~-g~~~l~s~s~dg~v~iwd~~ 265 (475)
..|+||+| ++++|++|+.||.|+|||+....... .....+|.+.|++|+| +|. +. +|++|+.|++|++||++
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~-~~~~~gH~~~V~~l~f--~p~~~~-~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPT-FIKGIGAGGSITGLKF--NPLNTN-QFYASSMEGTTRLQDFK 195 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCE-EECCCSSSCCCCEEEE--CSSCTT-EEEEECSSSCEEEEETT
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCcee-EEEccCCCCCEEEEEE--eCCCCC-EEEEEeCCCEEEEeecc
Confidence 46999999 46799999999999999998665432 3445689999999999 984 55 59999999999999998
Q ss_pred CCeeeeeee---ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEE
Q 011924 266 KYQLSKHFR---FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS 342 (475)
Q Consensus 266 ~~~~~~~~~---~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~ 342 (475)
++....... ....+. +++|+|++++|++|+.+|.|++||++ ++.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~ 245 (435)
T 4e54_B 196 GNILRVFASSDTINIWFC-----------------------------SLDVSASSRMVVTGDNVGNVILLNMD-GKELWN 245 (435)
T ss_dssp SCEEEEEECCSSCSCCCC-----------------------------CEEEETTTTEEEEECSSSBEEEEESS-SCBCCC
T ss_pred CCceeEEeccCCCCccEE-----------------------------EEEECCCCCEEEEEeCCCcEeeeccC-cceeEE
Confidence 765433332 222344 89999999999999999999999986 566778
Q ss_pred eecCCCCeEEEEEecCCC-EEEEEeCCCeEEEEECCCCCc--eEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEEC
Q 011924 343 LCGHLDFSFASAWHPNGV-TFATGNQDKTCRIWDLRNLSE--SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDV 419 (475)
Q Consensus 343 l~~h~~~v~~~~~sp~g~-~l~t~s~dg~v~iwd~~~~~~--~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~ 419 (475)
+.+|...|.+++|+|++. +|++|+.|++|+|||+++... .+....+|...|++++|+|+|++|++++.|+.|+|||+
T Consensus 246 ~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 246 LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSA 325 (435)
T ss_dssp SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred EecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEEC
Confidence 899999999999999875 788999999999999986332 22334568899999999999999999999999999999
Q ss_pred CCCeeEEEEeccCC------CeEEEEEcCCCCeEEEEE
Q 011924 420 KSGYEKEQEIDFFG------EISGISFSPDTESLFIGV 451 (475)
Q Consensus 420 ~~~~~~~~~~~~~~------~i~~l~fspdg~~l~~~~ 451 (475)
.++.....+..|.. .+..+.|+|++..++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (435)
T 4e54_B 326 SQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGR 363 (435)
T ss_dssp SSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEEC
T ss_pred CCCccceEEecccccccccceeEEEEEcCCCCEEEEEE
Confidence 99988777766542 244567888888887764
No 77
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=3.3e-29 Score=251.24 Aligned_cols=253 Identities=15% Similarity=0.245 Sum_probs=215.0
Q ss_pred CCCeEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCceEEEEeCCCC
Q 011924 141 SKHDVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRP 219 (475)
Q Consensus 141 ~~~~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~ 219 (475)
+...+++ ..++.|.+|+..+++....+. + +...|.++++++++|++|+.||.|++|++.+.
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~--~----------------h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILT--G----------------HTGSVLCLQYDERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEEC--C----------------CSSCEEEEECCSSEEEEEETTSCEEEEESSSC
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEc--C----------------CCCcEEEEEECCCEEEEEcCCCeEEEEECCCC
Confidence 4444544 567899999988776544432 1 23479999999999999999999999999876
Q ss_pred CceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeee---eeee-ccccEEeccCCceEEEEEEee
Q 011924 220 GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS---KHFR-FPWPVNVSSSYCIILLCRLLN 295 (475)
Q Consensus 220 ~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~---~~~~-~~~~v~~s~~~~~l~~~~v~d 295 (475)
... .....|...|.++++ ++ . ++++|+.|+.|++||+.+++.. ..+. +...+.
T Consensus 204 ~~~---~~~~~h~~~v~~l~~--~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~--------------- 260 (435)
T 1p22_A 204 EML---NTLIHHCEAVLHLRF--NN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--------------- 260 (435)
T ss_dssp CEE---EEECCCCSCEEEEEC--CT--T-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEE---------------
T ss_pred cEE---EEEcCCCCcEEEEEE--cC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEE---------------
Confidence 543 556688999999988 53 3 4999999999999999887654 2333 677777
Q ss_pred cccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEE
Q 011924 296 FMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWD 375 (475)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd 375 (475)
+++| +++++++++.|+.|++||+++++.+..+.+|...|.+++| +++++++|+.|++|++||
T Consensus 261 --------------~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd 322 (435)
T 1p22_A 261 --------------VVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 322 (435)
T ss_dssp --------------EEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred --------------EEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 8888 7899999999999999999999999999999999999999 468999999999999999
Q ss_pred CCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCe---------eEEEEeccCCCeEEEEEcCCCCe
Q 011924 376 LRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY---------EKEQEIDFFGEISGISFSPDTES 446 (475)
Q Consensus 376 ~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~i~~l~fspdg~~ 446 (475)
+++ ++++..+.+|...|.+++| ++++|++|+.||.|++||+.++. .+..+..|.+.|.+++| ++.+
T Consensus 323 ~~~-~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~ 397 (435)
T 1p22_A 323 IEC-GACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQ 397 (435)
T ss_dssp TTT-CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSC
T ss_pred CCC-CCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCE
Confidence 987 7889999999999999999 78899999999999999997665 77788899999999999 7889
Q ss_pred EEEEEecCCcc
Q 011924 447 LFIGVWDRTYG 457 (475)
Q Consensus 447 l~~~~~D~~~~ 457 (475)
|++|+.|+++.
T Consensus 398 l~s~s~Dg~i~ 408 (435)
T 1p22_A 398 IVSSSHDDTIL 408 (435)
T ss_dssp EEECCSSSEEE
T ss_pred EEEEeCCCEEE
Confidence 99999998774
No 78
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=7e-30 Score=256.22 Aligned_cols=271 Identities=15% Similarity=0.145 Sum_probs=204.8
Q ss_pred ceeEEecCC-CeEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE---cCcEEEEEecC
Q 011924 134 RNLVWATSK-HDVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGFQ 208 (475)
Q Consensus 134 r~l~~~~~~-~~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~~lvsg~~d 208 (475)
..+.|.+.. +.|.+ ..++.|++|+..++....++.+.|| ...|++|+| ++++|++|+.|
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH----------------~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGA----------------GGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSS----------------SCCCCEEEECSSCTTEEEEECSS
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCC----------------CCCEEEEEEeCCCCCEEEEEeCC
Confidence 445576543 44555 4579999999887776665544432 346899998 57899999999
Q ss_pred ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCce
Q 011924 209 GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCI 287 (475)
Q Consensus 209 g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~ 287 (475)
|+|++||+...... .......+...+.+++| +|++.. |++|+.||.|++||++... +..+. |...|.
T Consensus 187 ~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~-l~~g~~dg~i~~wd~~~~~-~~~~~~h~~~v~------- 254 (435)
T 4e54_B 187 GTTRLQDFKGNILR-VFASSDTINIWFCSLDV--SASSRM-VVTGDNVGNVILLNMDGKE-LWNLRMHKKKVT------- 254 (435)
T ss_dssp SCEEEEETTSCEEE-EEECCSSCSCCCCCEEE--ETTTTE-EEEECSSSBEEEEESSSCB-CCCSBCCSSCEE-------
T ss_pred CEEEEeeccCCcee-EEeccCCCCccEEEEEE--CCCCCE-EEEEeCCCcEeeeccCcce-eEEEecccceEE-------
Confidence 99999999753322 11222233445677888 999986 9999999999999997544 44444 788888
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECCCCc-EEEEEeCCCcEEEEECCCCceEEE---eecCCCCeEEEEEecCCCEEE
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSPDGK-LLIIVGDNPDGLLVDSMTGKTIAS---LCGHLDFSFASAWHPNGVTFA 363 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~dg~i~iwd~~~~~~~~~---l~~h~~~v~~~~~sp~g~~l~ 363 (475)
+++|+|++. +|++++.|+.|++||+++++.... ..+|...|.+++|+|+|++|+
T Consensus 255 ----------------------~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 255 ----------------------HVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp ----------------------EEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred ----------------------eeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeE
Confidence 999999876 788899999999999987764433 357999999999999999999
Q ss_pred EEeCCCeEEEEECCCCCceEEEEecCCC------ceEEEEEccCCCEEEEEcC------------CCeEEEEECCCCeeE
Q 011924 364 TGNQDKTCRIWDLRNLSESVAVLKGNLG------AIRSIRYTSDGRYMATAEP------------ADFVHVYDVKSGYEK 425 (475)
Q Consensus 364 t~s~dg~v~iwd~~~~~~~~~~~~~~~~------~v~~l~~spdg~~la~~~~------------dg~i~iwd~~~~~~~ 425 (475)
+++.|++|+|||+++ +.....+..|.. .+..+.|+|++.+++++.. ++.|++||+.++..+
T Consensus 313 s~~~D~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~ 391 (435)
T 4e54_B 313 TTDQKSEIRVYSASQ-WDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMM 391 (435)
T ss_dssp EEESSSCEEEEESSS-SSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEE
T ss_pred EEcCCCEEEEEECCC-CccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEE
Confidence 999999999999987 555555554432 2335667777777766642 357999999999888
Q ss_pred EEEe-ccCCCeEEE-EEcCCCCeEEEEEecCCc
Q 011924 426 EQEI-DFFGEISGI-SFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 426 ~~~~-~~~~~i~~l-~fspdg~~l~~~~~D~~~ 456 (475)
..+. .|...|.++ +|+|+|++|++|+ |+++
T Consensus 392 ~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i 423 (435)
T 4e54_B 392 CQLYDPESSGISSLNEFNPMGDTLASAM-GYHI 423 (435)
T ss_dssp EEECCSSCCCCCCEEEECTTSSCEEEEC-SSEE
T ss_pred EEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcE
Confidence 8765 467788887 6999999998875 6654
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=2.5e-29 Score=249.35 Aligned_cols=231 Identities=13% Similarity=0.166 Sum_probs=195.6
Q ss_pred cceeEEEEEE---cCcEEEEEecCceEEEEeCCCCCce----EEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEE
Q 011924 188 TQTQVSTLAV---KDKLLVAGGFQGELICKHLDRPGVS----FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVR 260 (475)
Q Consensus 188 ~~~~v~~l~~---~~~~lvsg~~dg~i~vw~~~~~~~~----~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~ 260 (475)
+...|++++| ++++|++|+.||.|++|++...+.. .+...+.+|...|.+++| +|++..+|++++.|++|+
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAW--HPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEE--CSSBTTEEEEEETTSCEE
T ss_pred CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEE--CcCCCCEEEEEcCCCEEE
Confidence 3457999999 6789999999999999999876321 112456688999999999 999855699999999999
Q ss_pred EEECCCCeeeeee--e-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCC
Q 011924 261 DFDMGKYQLSKHF--R-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTG 337 (475)
Q Consensus 261 iwd~~~~~~~~~~--~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~ 337 (475)
+||+.+++.+..+ . +...+. +++|+|++++|++++.|+.|++||++++
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIY-----------------------------SVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEE-----------------------------EEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred EEECCCCCccEEEecCCCCCceE-----------------------------EEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 9999999988888 3 778888 9999999999999999999999999999
Q ss_pred ceEEEe-ecCCCC-eEEEEEecCCCEEEEE---eCCCeEEEEECCCCCceEEEEe-cCCCceEEEEEccCCCEEEE-EcC
Q 011924 338 KTIASL-CGHLDF-SFASAWHPNGVTFATG---NQDKTCRIWDLRNLSESVAVLK-GNLGAIRSIRYTSDGRYMAT-AEP 410 (475)
Q Consensus 338 ~~~~~l-~~h~~~-v~~~~~sp~g~~l~t~---s~dg~v~iwd~~~~~~~~~~~~-~~~~~v~~l~~spdg~~la~-~~~ 410 (475)
+.+..+ .+|.+. +.+++|+|++++|++| +.|++|++||+++...++.... .+...+.+++|+|+|++|++ ++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 209 TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT
T ss_pred ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC
Confidence 999998 788876 8999999999999999 7899999999987555444443 46678999999999999864 557
Q ss_pred CCeEEEEECCCCee-EEEEec--cCCCeEEEEEcCCCCeEEE
Q 011924 411 ADFVHVYDVKSGYE-KEQEID--FFGEISGISFSPDTESLFI 449 (475)
Q Consensus 411 dg~i~iwd~~~~~~-~~~~~~--~~~~i~~l~fspdg~~l~~ 449 (475)
|+.|++||+.++.. +..+.. +.+.|.+++|+|++.++++
T Consensus 289 dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s 330 (402)
T 2aq5_A 289 DSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN 330 (402)
T ss_dssp CSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG
T ss_pred CCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee
Confidence 99999999998864 444443 5589999999999998875
No 80
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=2.3e-29 Score=247.65 Aligned_cols=230 Identities=16% Similarity=0.144 Sum_probs=187.1
Q ss_pred eeEEEEEE--cC-cEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC
Q 011924 190 TQVSTLAV--KD-KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 190 ~~v~~l~~--~~-~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
..|.+++| ++ ++|++|+.||.|++|++....... .....+|...|.+++| +|++..+|++++.|+.|++||+.+
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~d~~i~iwd~~~ 150 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS-FIQGMGPGDAITGMKF--NQFNTNQLFVSSIRGATTLRDFSG 150 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE-EECCCSTTCBEEEEEE--ETTEEEEEEEEETTTEEEEEETTS
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce-eeecCCcCCceeEEEe--CCCCCCEEEEEeCCCEEEEEECCC
Confidence 46899999 56 899999999999999998766542 2223468999999999 994434599999999999999986
Q ss_pred Ceeeeeee----ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEE
Q 011924 267 YQLSKHFR----FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS 342 (475)
Q Consensus 267 ~~~~~~~~----~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~ 342 (475)
.. ...+. +...+. +++|+|++++|++++.++.|++||+ +++++..
T Consensus 151 ~~-~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~ 199 (383)
T 3ei3_B 151 SV-IQVFAKTDSWDYWYC-----------------------------CVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFK 199 (383)
T ss_dssp CE-EEEEECCCCSSCCEE-----------------------------EEEEETTTTEEEEEETTSEEEEEET-TSCEEEE
T ss_pred Cc-eEEEeccCCCCCCeE-----------------------------EEEECCCCCEEEEECCCCCEEEEEC-CCCEEEE
Confidence 43 33333 235677 9999999999999999999999999 5888999
Q ss_pred eecCCCCeEEEEEecCCC-EEEEEeCCCeEEEEECCCC---CceEEEEecCCCceEEEEEcc-CCCEEEEEcCCCeEEEE
Q 011924 343 LCGHLDFSFASAWHPNGV-TFATGNQDKTCRIWDLRNL---SESVAVLKGNLGAIRSIRYTS-DGRYMATAEPADFVHVY 417 (475)
Q Consensus 343 l~~h~~~v~~~~~sp~g~-~l~t~s~dg~v~iwd~~~~---~~~~~~~~~~~~~v~~l~~sp-dg~~la~~~~dg~i~iw 417 (475)
+.+|...|.+++|+|+++ +|++++.|++|++||++.. ..++..+ +|...|++++|+| +|++|++++.|+.|++|
T Consensus 200 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iw 278 (383)
T 3ei3_B 200 EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVY 278 (383)
T ss_dssp EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEE
T ss_pred eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEE
Confidence 999999999999999998 9999999999999999862 3345555 6889999999999 99999999999999999
Q ss_pred ECCCCeeEEEEeccC-----------------CCeEEEEEcCCCCeEEEEEecCCc
Q 011924 418 DVKSGYEKEQEIDFF-----------------GEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 418 d~~~~~~~~~~~~~~-----------------~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
|++++..+..+..|. +.+..++|+|+|++ +|+.|+++
T Consensus 279 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i 332 (383)
T 3ei3_B 279 SSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTI 332 (383)
T ss_dssp ETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCE
T ss_pred ECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeE
Confidence 999887766666443 23444566666655 55556554
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=5e-30 Score=257.30 Aligned_cols=263 Identities=15% Similarity=0.153 Sum_probs=190.1
Q ss_pred ceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCc--------eEEEeeecCCC------------CceeEEEEEeCCCC
Q 011924 189 QTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGV--------SFCSRTTYDDN------------AITNAVEIYGSPSG 246 (475)
Q Consensus 189 ~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~--------~~~~~~~~~~~------------~~v~~l~~~~s~~g 246 (475)
...|++++| ++++|++|+.||.|++|++..... ..+...+.+|. ..|++++| +|++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~--~~~~ 105 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW--LPQK 105 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE--CCCC
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE--cCCC
Confidence 358999999 899999999999999999986542 11234556787 88999999 9987
Q ss_pred C-eEEEEEeCCCeEEEEECCCCeeeeeee----ccccEEe-ccC----CceEEEEEEeecccce--EE--EEeeeeeeEE
Q 011924 247 A-VHFTASNNDCGVRDFDMGKYQLSKHFR----FPWPVNV-SSS----YCIILLCRLLNFMTEK--VI--ICLLCLQHSS 312 (475)
Q Consensus 247 ~-~~l~s~s~dg~v~iwd~~~~~~~~~~~----~~~~v~~-s~~----~~~l~~~~v~d~~~~~--~~--~~~~~i~~~~ 312 (475)
. .+|++++.|++|++|++.+++...... ..+.+.. ... -..+.... +...... .. .+...|.+++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMD-LMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEE-EEEEEEEEEEECSCCSSCCCEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchh-eeeeccceEEeccCCCcceEEEE
Confidence 2 248899999999999997655431100 0000000 000 00000000 0000000 00 0112456999
Q ss_pred ECCCCcEEEEEeCCCcEEEEECCC-CceEEE-------eecCCCCeEEEEEecCC-CEEEEEeCCCeEEEEECCCCCce-
Q 011924 313 QSPDGKLLIIVGDNPDGLLVDSMT-GKTIAS-------LCGHLDFSFASAWHPNG-VTFATGNQDKTCRIWDLRNLSES- 382 (475)
Q Consensus 313 ~sp~g~~l~~~~~dg~i~iwd~~~-~~~~~~-------l~~h~~~v~~~~~sp~g-~~l~t~s~dg~v~iwd~~~~~~~- 382 (475)
|+|++++|+++ .|+.|++||+++ ++.+.. +.+|...|.+++|+|++ ++|++|+.|++|++||+++ +..
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~ 262 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA-SALC 262 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT-CSSS
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC-Cccc
Confidence 99999999998 899999999984 444442 56899999999999998 9999999999999999987 444
Q ss_pred ---EEEEecCCC------------ceEEEEEccCCCEEEEEcCCCeEEEEECCC-CeeEEEEeccCCC------------
Q 011924 383 ---VAVLKGNLG------------AIRSIRYTSDGRYMATAEPADFVHVYDVKS-GYEKEQEIDFFGE------------ 434 (475)
Q Consensus 383 ---~~~~~~~~~------------~v~~l~~spdg~~la~~~~dg~i~iwd~~~-~~~~~~~~~~~~~------------ 434 (475)
+..+..|.. .|.+++|+|+|++|++++. +.|+|||+++ +..+..+..|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 678888775 8999999999999999998 9999999987 7777777777532
Q ss_pred ---eEEEEEcCCCCeEEEEEecCCcc
Q 011924 435 ---ISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 435 ---i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+..++|+|++++|++|+.|+.+.
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~ 367 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFR 367 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEE
T ss_pred cccceEEEECCCCCEEEEeccCCEEE
Confidence 33499999999999999987663
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=2.5e-29 Score=271.55 Aligned_cols=233 Identities=17% Similarity=0.226 Sum_probs=209.8
Q ss_pred ceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC
Q 011924 189 QTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 189 ~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
...|.+++| ++.+|++|+.+|.|++|++.+.... ..+..|.+.|.+++| +|+++. |++++.||.|++|++.+
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~---~~~~~~~~~v~~~~~--s~~~~~-l~~~~~dg~i~vw~~~~ 86 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEV---RSIQVTETPVRAGKF--IARKNW-IIVGSDDFRIRVFNYNT 86 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE---EEEECCSSCEEEEEE--EGGGTE-EEEEETTSEEEEEETTT
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceE---EEEecCCCcEEEEEE--eCCCCE-EEEEeCCCeEEEEECCC
Confidence 347999999 8999999999999999999875443 455678999999999 999986 89999999999999999
Q ss_pred Ceeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCC-ceEEEee
Q 011924 267 YQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTG-KTIASLC 344 (475)
Q Consensus 267 ~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~-~~~~~l~ 344 (475)
++.+..+. +...+. +++|+|++++|++++.||.|++||+.++ .....+.
T Consensus 87 ~~~~~~~~~~~~~v~-----------------------------~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 137 (814)
T 3mkq_A 87 GEKVVDFEAHPDYIR-----------------------------SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (814)
T ss_dssp CCEEEEEECCSSCEE-----------------------------EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred CcEEEEEecCCCCEE-----------------------------EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc
Confidence 99888887 888899 9999999999999999999999999987 6778889
Q ss_pred cCCCCeEEEEEec-CCCEEEEEeCCCeEEEEECCCCCceEEEEecC-CCceEEEEEcc--CCCEEEEEcCCCeEEEEECC
Q 011924 345 GHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLKGN-LGAIRSIRYTS--DGRYMATAEPADFVHVYDVK 420 (475)
Q Consensus 345 ~h~~~v~~~~~sp-~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~-~~~v~~l~~sp--dg~~la~~~~dg~i~iwd~~ 420 (475)
+|...|.+++|+| ++++|++++.||+|++||++. ......+..+ ...+.+++|+| ++++|++++.++.|++||+.
T Consensus 138 ~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC-SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 9999999999999 899999999999999999977 4555555544 48899999999 99999999999999999999
Q ss_pred CCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 421 SGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 421 ~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
++..+..+..|.+.|.+++|+|++++|++++.|+.+.
T Consensus 217 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~ 253 (814)
T 3mkq_A 217 TKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLK 253 (814)
T ss_dssp TTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEE
Confidence 9999999999999999999999999999999998764
No 83
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-28 Score=246.73 Aligned_cols=278 Identities=12% Similarity=0.095 Sum_probs=211.7
Q ss_pred cceeEEecCCCeEEEecCCeEEEEecCCCC---ceEEEeccCCCC--CCC----C-------------------------
Q 011924 133 LRNLVWATSKHDVYLMSHFSVIHWSSLTSS---RSQVLNVSGHVA--PSE----K------------------------- 178 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~~~~v~~w~~~~~~---~~~~~~~~~~~~--~~~----~------------------------- 178 (475)
...+.|.+++..|+...++.|.+|+..+++ ....+....... +.. .
T Consensus 7 ~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (450)
T 2vdu_B 7 LQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKR 86 (450)
T ss_dssp CCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC--------------------------------------
T ss_pred EEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccc
Confidence 344557777777777888999999988887 333332111000 000 0
Q ss_pred ------CCCCccccccceeEEEEEE--cCcEE-EEEecCceEEEEeCC--CCCceEEEeeecCCCCceeEEEEEeCCCCC
Q 011924 179 ------HPGSLLEGFTQTQVSTLAV--KDKLL-VAGGFQGELICKHLD--RPGVSFCSRTTYDDNAITNAVEIYGSPSGA 247 (475)
Q Consensus 179 ------~~~~~~~~~~~~~v~~l~~--~~~~l-vsg~~dg~i~vw~~~--~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~ 247 (475)
.++. ....+...|.+++| ++++| ++|+.+|.|++|++. ....... .....+...|.+++| +|+++
T Consensus 87 ~~~~~~~~~~-~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~~~~--sp~~~ 162 (450)
T 2vdu_B 87 TAAKVPSPGL-GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKL-RKRFCFSKRPNAISI--AEDDT 162 (450)
T ss_dssp --------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEE-EEEEECSSCEEEEEE--CTTSS
T ss_pred cCccccCCCC-CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeee-eecccCCCCceEEEE--cCCCC
Confidence 0000 00012236999999 78886 899999999999998 4443321 112356788999999 99998
Q ss_pred eEEEEEeCCCeEEEEECCCCeeee----eee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC---CcE
Q 011924 248 VHFTASNNDCGVRDFDMGKYQLSK----HFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD---GKL 319 (475)
Q Consensus 248 ~~l~s~s~dg~v~iwd~~~~~~~~----~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~---g~~ 319 (475)
. |++++.++.|++|++.+++... .+. +...|. +++|+|+ +++
T Consensus 163 ~-l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~-----------------------------~~~~sp~~~~~~~ 212 (450)
T 2vdu_B 163 T-VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLT-----------------------------DVHLIKDSDGHQF 212 (450)
T ss_dssp E-EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEE-----------------------------EEEEEECTTSCEE
T ss_pred E-EEEEeCCCcEEEEecCCcccccccceeeecccCceE-----------------------------EEEEcCCCCCCcE
Confidence 6 8889999999999998876543 433 777888 9999999 999
Q ss_pred EEEEeCCCcEEEEECCCCceEEE-eecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEec----------
Q 011924 320 LIIVGDNPDGLLVDSMTGKTIAS-LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG---------- 388 (475)
Q Consensus 320 l~~~~~dg~i~iwd~~~~~~~~~-l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~---------- 388 (475)
|++++.|+.|++||+++++.+.. +.+|...|.+++|+ ++++|++++.|++|++||+++ ++++..+..
T Consensus 213 l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~ 290 (450)
T 2vdu_B 213 IITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLND 290 (450)
T ss_dssp EEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT-CCEEEEEECHHHHGGGCCT
T ss_pred EEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC-CcEeeeecchhhhhhhhhh
Confidence 99999999999999999998877 56899999999999 999999999999999999987 677777753
Q ss_pred ---------------CCCceEEEEEccCCCEEEEEc-CCCeEEEEEC--CCC---eeEEEEeccCCCeEEEEEcCCCCeE
Q 011924 389 ---------------NLGAIRSIRYTSDGRYMATAE-PADFVHVYDV--KSG---YEKEQEIDFFGEISGISFSPDTESL 447 (475)
Q Consensus 389 ---------------~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~--~~~---~~~~~~~~~~~~i~~l~fspdg~~l 447 (475)
....|.+++|+|++++|++++ .++.|+||++ .++ ..+..+..+ +.|.+++|+|++.++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v 369 (450)
T 2vdu_B 291 QHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQV 369 (450)
T ss_dssp TSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEE
T ss_pred cccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEE
Confidence 235789999999999999998 8999999999 555 566666666 899999999964333
No 84
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=4.1e-29 Score=243.77 Aligned_cols=262 Identities=13% Similarity=0.100 Sum_probs=198.2
Q ss_pred cceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC
Q 011924 188 TQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (475)
Q Consensus 188 ~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~ 265 (475)
+...|.+++| ++++|++|+.+| +++|++....... .. .+ ..+..+++ .++++.++++++.|++|++||+.
T Consensus 18 h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~---~~-~~-~~~~~~~~--~~~~~~~~~~~~~d~~v~iWd~~ 89 (355)
T 3vu4_A 18 VSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIM---SQ-EM-RHLSKVRM--LHRTNYVAFVTGVKEVVHIWDDV 89 (355)
T ss_dssp -CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEE---EE-EC-SCCCEEEE--CTTSSEEEEECSSTTEEEEEETT
T ss_pred CCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceee---ee-ec-CCeEEEEE--cCCCCEEEEEECCccEEEEEECC
Confidence 3457999999 899999988775 7899987543221 11 11 24677888 78888766788889999999999
Q ss_pred CCeeeeeeeccccEE---eccCCceEE---EEEEeecccc-eEEEEee-eeeeEEECCCCcEEEE--EeCCCcEEEEECC
Q 011924 266 KYQLSKHFRFPWPVN---VSSSYCIIL---LCRLLNFMTE-KVIICLL-CLQHSSQSPDGKLLII--VGDNPDGLLVDSM 335 (475)
Q Consensus 266 ~~~~~~~~~~~~~v~---~s~~~~~l~---~~~v~d~~~~-~~~~~~~-~i~~~~~sp~g~~l~~--~~~dg~i~iwd~~ 335 (475)
+++.+..+.+..++. ++++...++ .+++||+.++ +.+.... ....+++++ .++++ ++.+|.|++||+.
T Consensus 90 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~g~v~iwd~~ 167 (355)
T 3vu4_A 90 KKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNLGQIHITKLQ 167 (355)
T ss_dssp TTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCTTCEEEEECC
T ss_pred CCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcCcEEEEEECC
Confidence 999988887655544 565544443 6899999877 3322111 223456666 56666 5789999999999
Q ss_pred CCc---------------e-EEEeecCCCCeEEEEEecCCCEEEEEeCCCe-EEEEECCCCCceEEEEe-c-CCCceEEE
Q 011924 336 TGK---------------T-IASLCGHLDFSFASAWHPNGVTFATGNQDKT-CRIWDLRNLSESVAVLK-G-NLGAIRSI 396 (475)
Q Consensus 336 ~~~---------------~-~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~-v~iwd~~~~~~~~~~~~-~-~~~~v~~l 396 (475)
+++ + +..+.+|...|.+++|+|+|++||+|+.|++ |+|||+++ ++++..+. + |...|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~ 246 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED-GVLVREFRRGLDRADVVDM 246 (355)
T ss_dssp C------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT-CCEEEEEECTTCCSCEEEE
T ss_pred CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEEcCCCCCcEEEE
Confidence 765 2 6788999999999999999999999999998 99999987 78888888 5 89999999
Q ss_pred EEccCCCEEEEEcCCCeEEEEECCCCeeEE--EE------------------e---ccCCCeEEEEEcCCCCeEEEEEec
Q 011924 397 RYTSDGRYMATAEPADFVHVYDVKSGYEKE--QE------------------I---DFFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 397 ~~spdg~~la~~~~dg~i~iwd~~~~~~~~--~~------------------~---~~~~~i~~l~fspdg~~l~~~~~D 453 (475)
+|+|+|++|++++.|+.|+|||+..+.... .+ . ........++|+|+|++|++++.|
T Consensus 247 ~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 247 KWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp EECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred EECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 999999999999999999999997653111 00 0 011234679999999999999999
Q ss_pred CCcceEE
Q 011924 454 RTYGSLL 460 (475)
Q Consensus 454 ~~~~~ll 460 (475)
+.+..+.
T Consensus 327 g~~~~~~ 333 (355)
T 3vu4_A 327 RMIETFK 333 (355)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 8775443
No 85
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=6e-30 Score=253.23 Aligned_cols=224 Identities=9% Similarity=0.069 Sum_probs=171.1
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceE--EEeeecCCCCceeEEEEEeCC--------CCCeEEEEEeCCCeEEEEECCCC
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSF--CSRTTYDDNAITNAVEIYGSP--------SGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~--~~~~~~~~~~~v~~l~~~~s~--------~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
++.+|++|+.|++|++|++....... ....+.+|.+.|++|+| +| +++ +|++++.|++|+|||+.++
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~--~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDI--ADVYSADNRLAEQ-VIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEE--EEEECTTCSEEEE-EEEEEETTSEEEEEEEETT
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEE--ccccccccCCCCC-EEEEEECCCeEEEEECCCC
Confidence 67899999999999999998765332 23456789999999999 66 565 5999999999999999876
Q ss_pred eeee-eeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCC-cEEEEEeCCCcEEEEECCCCceEEE---
Q 011924 268 QLSK-HFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDG-KLLIIVGDNPDGLLVDSMTGKTIAS--- 342 (475)
Q Consensus 268 ~~~~-~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~dg~i~iwd~~~~~~~~~--- 342 (475)
..+. .+.+..++. +++|+|++ .+|++++.|+.|++||+++++....
T Consensus 177 ~~~~~~~~~~~~v~-----------------------------~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~ 227 (393)
T 4gq1_A 177 GPILAGYPLSSPGI-----------------------------SVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ 227 (393)
T ss_dssp EEEEEEEECSSCEE-----------------------------EEEEETTEEEEEEEEETTSEEEEEETTCCC-------
T ss_pred ceeeeecCCCCCcE-----------------------------EEEECCCCCceEEecCCCCEEEEEECCCCcccccccc
Confidence 6544 455888899 99999987 4799999999999999998764332
Q ss_pred ----------------------eecCCCCeEEEEEe-cCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEE----
Q 011924 343 ----------------------LCGHLDFSFASAWH-PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS---- 395 (475)
Q Consensus 343 ----------------------l~~h~~~v~~~~~s-p~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~---- 395 (475)
..+|...+.+++|+ |+++.|++++.|+++++||++. ++....+..+...+..
T Consensus 228 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~ 306 (393)
T 4gq1_A 228 TELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLL 306 (393)
T ss_dssp ---CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCS
T ss_pred cCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEEc
Confidence 23577888999997 6999999999999999999976 4444444444333332
Q ss_pred --------------EEEcc--CCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecC
Q 011924 396 --------------IRYTS--DGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 396 --------------l~~sp--dg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
..|+| ++.++++|+.|+.|+|||+.++........|..+|.+++|||||++||+++.|+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 307 PNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp CSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred cccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 23333 445778889999999999999988888888999999999999999999999775
No 86
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=9.9e-30 Score=247.58 Aligned_cols=235 Identities=14% Similarity=0.102 Sum_probs=200.2
Q ss_pred cceeEEEEEEc------CcEEEEEecCceEEEEeCCCCCceEEEeee--cCCCCceeEEEEEeCCC----CCeEEEEEeC
Q 011924 188 TQTQVSTLAVK------DKLLVAGGFQGELICKHLDRPGVSFCSRTT--YDDNAITNAVEIYGSPS----GAVHFTASNN 255 (475)
Q Consensus 188 ~~~~v~~l~~~------~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~--~~~~~~v~~l~~~~s~~----g~~~l~s~s~ 255 (475)
+..+|.+++|. ...+++++.+|.|++|++...+........ ..|...|.+++| +|+ |. +|++++.
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~-~l~~~~~ 93 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAW--TYDSNTSHP-LLAVAGS 93 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEE--EECTTTCCE-EEEEEET
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEe--ccCCCCCCC-EEEEecC
Confidence 44589999994 456777788889999999866544333222 236788999999 777 44 5999999
Q ss_pred CCeEEEEECCCCeeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEE
Q 011924 256 DCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVD 333 (475)
Q Consensus 256 dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd 333 (475)
||.|++||+.+++.+..+. +..+|. +++|+| ++++|++++.|+.|++||
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~-----------------------------~~~~~~~~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAIN-----------------------------ELKFHPRDPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEE-----------------------------EEEECSSCTTEEEEEETTSCEEEEE
T ss_pred CCEEEEEEchhceEeeeecCCCCcEE-----------------------------EEEECCCCCCEEEEEeCCCeEEEEE
Confidence 9999999999999988888 888999 999999 999999999999999999
Q ss_pred CCCCceEEEe---ecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEE--------------------------
Q 011924 334 SMTGKTIASL---CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVA-------------------------- 384 (475)
Q Consensus 334 ~~~~~~~~~l---~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~-------------------------- 384 (475)
+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+++ .+.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCc
Confidence 9999999888 68999999999999999999999999999999976 33222
Q ss_pred --EEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCee--------------EEEEeccCCCeEEEEEcCC--CCe
Q 011924 385 --VLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE--------------KEQEIDFFGEISGISFSPD--TES 446 (475)
Q Consensus 385 --~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~--------------~~~~~~~~~~i~~l~fspd--g~~ 446 (475)
....|...|.+++|+ +++|++++.|+.|++||+.++.. +..+..|...|.+++|+|+ +++
T Consensus 224 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp EEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred cccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence 233488899999999 77999999999999999987643 6677788999999999999 999
Q ss_pred EEEEEecCCcc
Q 011924 447 LFIGVWDRTYG 457 (475)
Q Consensus 447 l~~~~~D~~~~ 457 (475)
|++|+.|+.+.
T Consensus 302 l~~~~~dg~i~ 312 (366)
T 3k26_A 302 LALGNQVGKLY 312 (366)
T ss_dssp EEEECTTSCEE
T ss_pred EEEEecCCcEE
Confidence 99999998764
No 87
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=245.83 Aligned_cols=257 Identities=9% Similarity=-0.021 Sum_probs=195.0
Q ss_pred ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCceEEEEeCCCCC-------
Q 011924 148 MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPG------- 220 (475)
Q Consensus 148 ~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~------- 220 (475)
..++.|++|+..+++....+.. ..|.++.+... +++|+.||.|++|+.....
T Consensus 55 ~~Dg~v~iwd~~~~~~~~~~~~--------------------~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 55 CEDGALHFTQLKDSKTITTITT--------------------PNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp EETTEEEEEEESSSSCEEEEEE--------------------ECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTT
T ss_pred CCCCcEEEEECCCCcEEEEEec--------------------CCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCC
Confidence 4679999999988776554431 12333444223 8999999999999765311
Q ss_pred ceEEEeeecCCCCceeEEEEEeCC--CCCeEEEEEeCCCeEEEEECCCCeeeeeee--ccccEEeccCCceEEEEEEeec
Q 011924 221 VSFCSRTTYDDNAITNAVEIYGSP--SGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPWPVNVSSSYCIILLCRLLNF 296 (475)
Q Consensus 221 ~~~~~~~~~~~~~~v~~l~~~~s~--~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~v~~s~~~~~l~~~~v~d~ 296 (475)
..........|...|.++++ +| +++. +++++.|++|++||+++++....+. +...+.
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~--~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~---------------- 174 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYG--HNEVNTEY-FIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYS---------------- 174 (343)
T ss_dssp CCEEEEEECCCSSCEEEEEC--CC---CCE-EEEEETTCCEEEEESSSSCEEEEECCCSSCCCC----------------
T ss_pred cceeEEeecCCCCCEEEEEc--CCCCCCCE-EEEEeCCCcEEEEECCCCcEEEEEecCCCCceE----------------
Confidence 11112344467788999999 99 8886 9999999999999999988866553 444677
Q ss_pred ccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceE-EEeec-CCCCeEEEEEecCCCEEEEEeCCCeEEEE
Q 011924 297 MTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI-ASLCG-HLDFSFASAWHPNGVTFATGNQDKTCRIW 374 (475)
Q Consensus 297 ~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~-~~l~~-h~~~v~~~~~sp~g~~l~t~s~dg~v~iw 374 (475)
+++|+|+|.+|++|+.|+.|++||+++++.+ ..+.+ |..+|.+++|+|++.+|++++. ++|++|
T Consensus 175 -------------~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iw 240 (343)
T 3lrv_A 175 -------------SGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCF 240 (343)
T ss_dssp -------------EEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEE
T ss_pred -------------EEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEE
Confidence 9999999999999999999999999999987 88888 9999999999999999999994 599999
Q ss_pred ECCCCCceEEEEec---CCCce--EEEEEccCCCEEEEEcC-CCeEEEEECCCCeeEEEEeccCCCeEEEEEcC---CCC
Q 011924 375 DLRNLSESVAVLKG---NLGAI--RSIRYTSDGRYMATAEP-ADFVHVYDVKSGYEKEQEIDFFGEISGISFSP---DTE 445 (475)
Q Consensus 375 d~~~~~~~~~~~~~---~~~~v--~~l~~spdg~~la~~~~-dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fsp---dg~ 445 (475)
|+++ .+.+..+.. +...+ .+++|+|+|++|++++. ++.|+||++.+....... .++..+.|+| ++.
T Consensus 241 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 315 (343)
T 3lrv_A 241 DLRK-DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFT 315 (343)
T ss_dssp ETTS-STTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCC
T ss_pred EcCC-CCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccc
Confidence 9987 444333332 33333 36999999999999988 999999999765433222 5677888999 899
Q ss_pred eEEEEEecCCcceEEEEE
Q 011924 446 SLFIGVWDRTYGSLLEYG 463 (475)
Q Consensus 446 ~l~~~~~D~~~~~ll~~~ 463 (475)
.|++++.|+.+.-++...
T Consensus 316 ~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 316 DMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp EEEEEEETTEEEEEEECS
T ss_pred eeEEEecCCceEEEEecC
Confidence 999999999886655443
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=2.3e-29 Score=243.08 Aligned_cols=233 Identities=11% Similarity=0.038 Sum_probs=200.1
Q ss_pred cceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCC-eEEEEEeCCCeEEEEEC
Q 011924 188 TQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGA-VHFTASNNDCGVRDFDM 264 (475)
Q Consensus 188 ~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~-~~l~s~s~dg~v~iwd~ 264 (475)
+...|++++| ++++|++|+.+|.|++|++..............|...|.+++| +|+++ . |++++.||.|++|++
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~-l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF--IDNTDLQ-IYVGTVQGEILKVDL 86 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEE--EESSSEE-EEEEETTSCEEEECS
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEE--CCCCCcE-EEEEcCCCeEEEEEe
Confidence 4457999999 7899999999999999999877643334455588899999999 89988 6 889999999999999
Q ss_pred -CCCeeeeeee--ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCC-----
Q 011924 265 -GKYQLSKHFR--FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMT----- 336 (475)
Q Consensus 265 -~~~~~~~~~~--~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~----- 336 (475)
.+++...... +...|. +++|+| +++|++++.|+.|++||+++
T Consensus 87 ~~~~~~~~~~~~~~~~~v~-----------------------------~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 87 IGSPSFQALTNNEANLGIC-----------------------------RICKYG-DDKLIAASWDGLIEVIDPRNYGDGV 136 (342)
T ss_dssp SSSSSEEECBSCCCCSCEE-----------------------------EEEEET-TTEEEEEETTSEEEEECHHHHTTBC
T ss_pred ccCCceEeccccCCCCceE-----------------------------EEEeCC-CCEEEEEcCCCeEEEEccccccccc
Confidence 8887655555 778888 999999 99999999999999999987
Q ss_pred ----CceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCC-CCc-eEEEEecCCCceEEEEEcc-CCCEEEEEc
Q 011924 337 ----GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN-LSE-SVAVLKGNLGAIRSIRYTS-DGRYMATAE 409 (475)
Q Consensus 337 ----~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~-~~~-~~~~~~~~~~~v~~l~~sp-dg~~la~~~ 409 (475)
++++..+. |...+.+++|+|++ +++++.++.|++||++. ... .......+...|++++|+| ++++|++++
T Consensus 137 ~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 137 IAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp EEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE
T ss_pred ccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe
Confidence 77776666 88999999999987 99999999999999986 433 3344456778999999999 999999999
Q ss_pred CCCeEEEEECCCC------eeEEEEeccCC---------CeEEEEEcCCCCeEEEEEecCCc
Q 011924 410 PADFVHVYDVKSG------YEKEQEIDFFG---------EISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 410 ~dg~i~iwd~~~~------~~~~~~~~~~~---------~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
.+|.|++|++... .....+..|.. .|.+++|+|++++|++++.|+.+
T Consensus 214 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 275 (342)
T 1yfq_A 214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGII 275 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCE
T ss_pred cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceE
Confidence 9999999999876 66777777754 99999999999999999999875
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.7e-28 Score=277.14 Aligned_cols=234 Identities=16% Similarity=0.181 Sum_probs=210.6
Q ss_pred cceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC
Q 011924 188 TQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (475)
Q Consensus 188 ~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~ 265 (475)
+...|++++| ++++|++|+.+|.|++|++.+.... ..+.+|.+.|.+++| +|+|+. +++++.|++|++||+.
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~---~~~~~h~~~v~~~~~--s~~~~~-l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL---LDIKAHEDEVLCCAF--SSDDSY-IATCSADKKVKIWDSA 687 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE---EEECCCSSCEEEEEE--CTTSSE-EEEEETTSEEEEEETT
T ss_pred ccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEE---EEeccCCCCEEEEEE--ecCCCE-EEEEeCCCeEEEEECC
Confidence 3457999999 8999999999999999999876644 456689999999999 999986 9999999999999999
Q ss_pred CCeeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC--CCcEEEEEeCCCcEEEEECCCCceEEE
Q 011924 266 KYQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP--DGKLLIIVGDNPDGLLVDSMTGKTIAS 342 (475)
Q Consensus 266 ~~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp--~g~~l~~~~~dg~i~iwd~~~~~~~~~ 342 (475)
+++.+..+. +...+. +++|+| ++.++++++.|+.|++||+++++++..
T Consensus 688 ~~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~ 738 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVN-----------------------------CCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNT 738 (1249)
T ss_dssp TCCEEEEEECCSSCEE-----------------------------EEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEE
T ss_pred CCceEEEEcCCCCcEE-----------------------------EEEEecCCCceEEEEEeCCCeEEEEECCCcchhhe
Confidence 999988887 788898 999999 566899999999999999999999999
Q ss_pred eecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEE------------------------------------
Q 011924 343 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL------------------------------------ 386 (475)
Q Consensus 343 l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~------------------------------------ 386 (475)
+.+|...|.+++|+|++++|++++.||+|++||++. +.....+
T Consensus 739 ~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~ 817 (1249)
T 3sfz_A 739 MFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRS-ANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA 817 (1249)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGG-TEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE
T ss_pred ecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCC-CcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc
Confidence 999999999999999999999999999999999865 3222211
Q ss_pred -------------------ecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeE
Q 011924 387 -------------------KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESL 447 (475)
Q Consensus 387 -------------------~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l 447 (475)
.+|...|.+++|+|+++++++++.++.|++||+.++..+..+.+|.+.|.+++|+|+|++|
T Consensus 818 ~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l 897 (1249)
T 3sfz_A 818 KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSF 897 (1249)
T ss_dssp TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEE
Confidence 2567789999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcc
Q 011924 448 FIGVWDRTYG 457 (475)
Q Consensus 448 ~~~~~D~~~~ 457 (475)
++++.|+++.
T Consensus 898 ~s~s~dg~v~ 907 (1249)
T 3sfz_A 898 LTASDDQTIR 907 (1249)
T ss_dssp EEEETTSCEE
T ss_pred EEEeCCCeEE
Confidence 9999998775
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=254.25 Aligned_cols=244 Identities=15% Similarity=0.186 Sum_probs=193.4
Q ss_pred eeEEEEEE---cCcEEEEEecCceEEEEeCCC---CCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEE
Q 011924 190 TQVSTLAV---KDKLLVAGGFQGELICKHLDR---PGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFD 263 (475)
Q Consensus 190 ~~v~~l~~---~~~~lvsg~~dg~i~vw~~~~---~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd 263 (475)
..|++++| ++.+|++|+.||.|++|++.. ..... ......|.+.|.+++| +|+++. |++++.|++|++||
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~h~~~v~~~~~--~~~~~~-l~s~s~dg~i~vwd 139 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS-SSLTYDCSSTVTQITM--IPNFDA-FAVSSKDGQIIVLK 139 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS-CSEEEECSSCEEEEEE--CTTSSE-EEEEETTSEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc-eeeeccCCCCEEEEEE--eCCCCE-EEEEeCCCEEEEEE
Confidence 47899988 468999999999999999865 22111 1222358899999999 999886 99999999999999
Q ss_pred CC---CCeeeeeeecc--ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEE--ECCCCcEEEEEeCCCcEEEEECCC
Q 011924 264 MG---KYQLSKHFRFP--WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSS--QSPDGKLLIIVGDNPDGLLVDSMT 336 (475)
Q Consensus 264 ~~---~~~~~~~~~~~--~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~--~sp~g~~l~~~~~dg~i~iwd~~~ 336 (475)
+. +++....+... ..+.+++.+ .. ..+.++. ++|++.+|++++.|+.|++||+++
T Consensus 140 ~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 201 (437)
T 3gre_A 140 VNHYQQESEVKFLNCECIRKINLKNFG------------KN------EYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT 201 (437)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEGGGGS------------SC------CCEEEEEEEECSSCEEEEEEETTSEEEEEETTT
T ss_pred eccccCCceeeccccceeEEEEccCcc------------cc------cCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 95 45444433311 111222110 00 0111444 778999999999999999999999
Q ss_pred CceEEEeec--CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEe-cCCCceEEEEEc----cCCCEEEEEc
Q 011924 337 GKTIASLCG--HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK-GNLGAIRSIRYT----SDGRYMATAE 409 (475)
Q Consensus 337 ~~~~~~l~~--h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~-~~~~~v~~l~~s----pdg~~la~~~ 409 (475)
++++..+.+ |...|.+++|+|++++|++|+.||+|++||++. ++++..+. .|..+|++++|+ |++++|++++
T Consensus 202 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 202 LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCccEEEEEc
Confidence 999999998 889999999999999999999999999999987 78888876 677899999665 5688999999
Q ss_pred CCCeEEEEECCCCeeEEEEecc--------------------------CCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 410 PADFVHVYDVKSGYEKEQEIDF--------------------------FGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 410 ~dg~i~iwd~~~~~~~~~~~~~--------------------------~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
.|+.|+|||+.++..+..+..| .+.|.+++|+ ++++|++|+.|+.+.
T Consensus 281 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~ 353 (437)
T 3gre_A 281 SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIV 353 (437)
T ss_dssp TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEE
T ss_pred CCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEE
Confidence 9999999999999888777644 3458889999 778999999898763
No 91
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=2.3e-29 Score=241.52 Aligned_cols=238 Identities=16% Similarity=0.138 Sum_probs=187.4
Q ss_pred ceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE----cCcEEEEEecC
Q 011924 134 RNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV----KDKLLVAGGFQ 208 (475)
Q Consensus 134 r~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~----~~~~lvsg~~d 208 (475)
+.+.|.++...|+.. .++.|++|+..++....+..+.+ +..+|.+++| ++++|++|+.|
T Consensus 17 ~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~g----------------H~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 17 HDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRG----------------HEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp EEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEEC----------------CSSCEEEEEECCGGGSSCEEEEETT
T ss_pred EEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcC----------------CCccEEEEEeCCCCCCCEEEEEECC
Confidence 444577777777664 57899999987664433333333 2347999998 27899999999
Q ss_pred ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCC--CCeEEEEEeCCCeEEEEECCCCee---eeeee-ccccEEec
Q 011924 209 GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGKYQL---SKHFR-FPWPVNVS 282 (475)
Q Consensus 209 g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~--g~~~l~s~s~dg~v~iwd~~~~~~---~~~~~-~~~~v~~s 282 (475)
|+|++|++...... +...+.+|...|++++| +|+ +.. |++|+.|++|++|++..+.. ...+. |...+.
T Consensus 81 ~~v~iWd~~~~~~~-~~~~~~~h~~~V~~v~~--~p~~~g~~-lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~-- 154 (316)
T 3bg1_A 81 RKVIIWREENGTWE-KSHEHAGHDSSVNSVCW--APHDYGLI-LACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCN-- 154 (316)
T ss_dssp SCEEEECCSSSCCC-EEEEECCCSSCCCEEEE--CCTTTCSC-EEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBC--
T ss_pred CEEEEEECCCCcce-EEEEccCCCCceEEEEE--CCCCCCcE-EEEEcCCCCEEEEecCCCCCcceeeeeccccCCcc--
Confidence 99999999865322 23456689999999999 887 654 99999999999999987532 22222 555666
Q ss_pred cCCceEEEEEEeecccceEEEEeeeeeeEEECCC-----------------CcEEEEEeCCCcEEEEECCCC---ceEEE
Q 011924 283 SSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD-----------------GKLLIIVGDNPDGLLVDSMTG---KTIAS 342 (475)
Q Consensus 283 ~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~-----------------g~~l~~~~~dg~i~iwd~~~~---~~~~~ 342 (475)
+++|+|+ +++|++++.|+.|++||++.+ +++..
T Consensus 155 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 207 (316)
T 3bg1_A 155 ---------------------------AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK 207 (316)
T ss_dssp ---------------------------CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC
T ss_pred ---------------------------eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee
Confidence 7888886 478999999999999999755 46778
Q ss_pred eecCCCCeEEEEEecCC----CEEEEEeCCCeEEEEECCCCC---ceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEE
Q 011924 343 LCGHLDFSFASAWHPNG----VTFATGNQDKTCRIWDLRNLS---ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVH 415 (475)
Q Consensus 343 l~~h~~~v~~~~~sp~g----~~l~t~s~dg~v~iwd~~~~~---~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~ 415 (475)
+.+|...|.+++|+|++ ++||+++.|++|+|||++... .....+..|...|.+++|+|+|++||+++.|+.|+
T Consensus 208 l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 89999999999999986 899999999999999997521 12344567888999999999999999999999999
Q ss_pred EEECC
Q 011924 416 VYDVK 420 (475)
Q Consensus 416 iwd~~ 420 (475)
||+..
T Consensus 288 lw~~~ 292 (316)
T 3bg1_A 288 LWKES 292 (316)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99975
No 92
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=7.1e-29 Score=235.87 Aligned_cols=200 Identities=14% Similarity=0.188 Sum_probs=174.1
Q ss_pred eeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC--Ceeeeeee-ccccEEeccCCceEEEEEEeecccceEE
Q 011924 226 RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK--YQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVI 302 (475)
Q Consensus 226 ~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~--~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~ 302 (475)
.++.+|...|.+++| +|+|+. |++|+.|++|++|++.. .+.+..+. |..+|.
T Consensus 3 ~~~~~h~~~V~~~~~--s~~g~~-las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~---------------------- 57 (297)
T 2pm7_B 3 VIANAHNEMIHDAVM--DYYGKR-MATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW---------------------- 57 (297)
T ss_dssp EECCSCSSCEEEEEE--CTTSSE-EEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE----------------------
T ss_pred eeccCCcCceEEEEE--CCCCCE-EEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE----------------------
Confidence 345689999999999 999996 99999999999999974 35566666 888999
Q ss_pred EEeeeeeeEEECC--CCcEEEEEeCCCcEEEEECCCCc--eEEEeecCCCCeEEEEEecC--CCEEEEEeCCCeEEEEEC
Q 011924 303 ICLLCLQHSSQSP--DGKLLIIVGDNPDGLLVDSMTGK--TIASLCGHLDFSFASAWHPN--GVTFATGNQDKTCRIWDL 376 (475)
Q Consensus 303 ~~~~~i~~~~~sp--~g~~l~~~~~dg~i~iwd~~~~~--~~~~l~~h~~~v~~~~~sp~--g~~l~t~s~dg~v~iwd~ 376 (475)
+++|+| ++++|++++.|+.|++||+++++ .+..+.+|...|.+++|+|+ +.+|++++.|++|++||+
T Consensus 58 -------~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~ 130 (297)
T 2pm7_B 58 -------RVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEF 130 (297)
T ss_dssp -------EEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEB
T ss_pred -------EEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEe
Confidence 999987 48999999999999999999874 56778889999999999997 899999999999999999
Q ss_pred CCCCc-eEEEEecCCCceEEEEEccC-------------CCEEEEEcCCCeEEEEECCCCe----eEEEEeccCCCeEEE
Q 011924 377 RNLSE-SVAVLKGNLGAIRSIRYTSD-------------GRYMATAEPADFVHVYDVKSGY----EKEQEIDFFGEISGI 438 (475)
Q Consensus 377 ~~~~~-~~~~~~~~~~~v~~l~~spd-------------g~~la~~~~dg~i~iwd~~~~~----~~~~~~~~~~~i~~l 438 (475)
+.... ....+.+|...|.+++|+|+ +++|++|+.|+.|+|||+.++. ....+.+|.+.|.++
T Consensus 131 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp CSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred cCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence 86422 25677889999999999997 5799999999999999998765 455677899999999
Q ss_pred EEcCCC---CeEEEEEecCCcc
Q 011924 439 SFSPDT---ESLFIGVWDRTYG 457 (475)
Q Consensus 439 ~fspdg---~~l~~~~~D~~~~ 457 (475)
+|+|++ .+|++++.|+++.
T Consensus 211 ~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp EECCCCSSSEEEEEEETTSCEE
T ss_pred EECCCCCCceEEEEEECCCcEE
Confidence 999995 8999999999875
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.4e-28 Score=242.32 Aligned_cols=229 Identities=17% Similarity=0.215 Sum_probs=199.2
Q ss_pred eEEEEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeee
Q 011924 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (475)
Q Consensus 191 ~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~ 270 (475)
.+.+++|.++.+++++.+|.|++|++....... .....|...|.+++| +|+++. |++|+.||.|++||+.+++.+
T Consensus 95 ~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~--~~~~~~~~~v~~v~~--s~~~~~-l~~~~~dg~i~iwd~~~~~~~ 169 (401)
T 4aez_A 95 YLNLLDWSNLNVVAVALERNVYVWNADSGSVSA--LAETDESTYVASVKW--SHDGSF-LSVGLGNGLVDIYDVESQTKL 169 (401)
T ss_dssp TCBCEEECTTSEEEEEETTEEEEEETTTCCEEE--EEECCTTCCEEEEEE--CTTSSE-EEEEETTSCEEEEETTTCCEE
T ss_pred eEEEEeecCCCEEEEECCCeEEEeeCCCCcEeE--eeecCCCCCEEEEEE--CCCCCE-EEEECCCCeEEEEECcCCeEE
Confidence 466788877888999999999999998766542 333448889999999 999986 899999999999999999888
Q ss_pred eeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECC-CCceEEEeecCCC
Q 011924 271 KHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSM-TGKTIASLCGHLD 348 (475)
Q Consensus 271 ~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~-~~~~~~~l~~h~~ 348 (475)
..+. +...+. +++| ++.+|++++.++.|++||++ .+..+..+.+|..
T Consensus 170 ~~~~~~~~~v~-----------------------------~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 218 (401)
T 4aez_A 170 RTMAGHQARVG-----------------------------CLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS 218 (401)
T ss_dssp EEECCCSSCEE-----------------------------EEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS
T ss_pred EEecCCCCceE-----------------------------EEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC
Confidence 8876 788888 8888 56799999999999999999 5677888999999
Q ss_pred CeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCC-CEEEEEc--CCCeEEEEECCCCeeE
Q 011924 349 FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG-RYMATAE--PADFVHVYDVKSGYEK 425 (475)
Q Consensus 349 ~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg-~~la~~~--~dg~i~iwd~~~~~~~ 425 (475)
.|.+++|+|++++|++|+.|++|++||+++ ..++..+..|...|.+++|+|++ .++++++ .|+.|++||+.++..+
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTC-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCC-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 999999999999999999999999999987 78888899999999999999977 4666655 7999999999999877
Q ss_pred EEEeccCCCeEEEEEcCCCCeEEEEE--ecCCcc
Q 011924 426 EQEIDFFGEISGISFSPDTESLFIGV--WDRTYG 457 (475)
Q Consensus 426 ~~~~~~~~~i~~l~fspdg~~l~~~~--~D~~~~ 457 (475)
..+. +.+.|.+++|+|++++|++++ .|+.+.
T Consensus 298 ~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~ 330 (401)
T 4aez_A 298 NTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLS 330 (401)
T ss_dssp EEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEE
T ss_pred EEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEE
Confidence 7664 678899999999999999965 676553
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1e-27 Score=250.19 Aligned_cols=294 Identities=14% Similarity=0.107 Sum_probs=236.9
Q ss_pred cceeEEecCCCeEEEecCCeEEEEecCCC----CceEEEeccCCCCCCCCCCCCcccccccee-EEEEEE----cCcEEE
Q 011924 133 LRNLVWATSKHDVYLMSHFSVIHWSSLTS----SRSQVLNVSGHVAPSEKHPGSLLEGFTQTQ-VSTLAV----KDKLLV 203 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~~~~v~~w~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~l~~----~~~~lv 203 (475)
...+.|+++...|++..++.+.+|+..++ +....+ .+ +... |.+++| ++++|+
T Consensus 21 v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~--~~----------------h~~~~v~~~~~sp~~~~~~l~ 82 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQF--TG----------------HGSSVVTTVKFSPIKGSQYLC 82 (615)
T ss_dssp CCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEE--CT----------------TTTSCEEEEEECSSTTCCEEE
T ss_pred eeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEE--ec----------------CCCceEEEEEECcCCCCCEEE
Confidence 45566888888888888999999998766 333222 21 2235 888888 468999
Q ss_pred EEecCceEEEEeCCCCC-----ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC----CeEEEEECCCCeeeeeee
Q 011924 204 AGGFQGELICKHLDRPG-----VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRDFDMGKYQLSKHFR 274 (475)
Q Consensus 204 sg~~dg~i~vw~~~~~~-----~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d----g~v~iwd~~~~~~~~~~~ 274 (475)
+|+.+|.|++|++.... .......+..|...|.+++| +|+++. +++++.+ +.|++|+ .++.+..+.
T Consensus 83 s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~-l~~~~~~~~~~~~v~~~d--~~~~~~~~~ 157 (615)
T 1pgu_A 83 SGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW--DFEGRR-LCVVGEGRDNFGVFISWD--SGNSLGEVS 157 (615)
T ss_dssp EEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEE--CTTSSE-EEEEECCSSCSEEEEETT--TCCEEEECC
T ss_pred EecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEE--eCCCCE-EEEeccCCCCccEEEEEE--CCCcceeee
Confidence 99999999999996431 12224556678899999999 999997 7777777 6888888 455555554
Q ss_pred -cc---ccEEeccCCc-eEE------EEEEeecccceEEEEee-------eeeeEEECCC-CcEEEEEeCCCcEEEEECC
Q 011924 275 -FP---WPVNVSSSYC-IIL------LCRLLNFMTEKVIICLL-------CLQHSSQSPD-GKLLIIVGDNPDGLLVDSM 335 (475)
Q Consensus 275 -~~---~~v~~s~~~~-~l~------~~~v~d~~~~~~~~~~~-------~i~~~~~sp~-g~~l~~~~~dg~i~iwd~~ 335 (475)
+. ..+.|+|++. .++ .+++||..+++....+. .|.+++|+|+ +++|++++.++.|++||++
T Consensus 158 ~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 158 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 43 3455899987 443 68999999988877654 5889999999 9999999999999999999
Q ss_pred CCceEEEe-e---cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecC----CCceEEEEEccCCCEEEE
Q 011924 336 TGKTIASL-C---GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN----LGAIRSIRYTSDGRYMAT 407 (475)
Q Consensus 336 ~~~~~~~l-~---~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~----~~~v~~l~~spdg~~la~ 407 (475)
+++.+..+ . +|...|.+++|+ ++++|++++.|++|++||+++ ++.+..+..+ ...+.++.|+ ++++|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 314 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIIS 314 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEE
T ss_pred CCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCcccCceeEEEeC-CCCeEEE
Confidence 99999999 6 899999999999 999999999999999999987 7778888776 3577888885 8999999
Q ss_pred EcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 408 AEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 408 ~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
++.++.|++||+.++..+..+..|.+.|.+++| |+ |++++.|+.+
T Consensus 315 ~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i 359 (615)
T 1pgu_A 315 LSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRI 359 (615)
T ss_dssp EETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCE
T ss_pred EECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeE
Confidence 999999999999998888888888888888888 76 5566665544
No 95
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=8.3e-29 Score=245.58 Aligned_cols=224 Identities=20% Similarity=0.248 Sum_probs=188.8
Q ss_pred EEEEEecCceEEEEeCCCCCce-EEEeeecCCCCceeEEEEEeCC-CCCeEEEEEeCCCeEEEEECCCC-------eeee
Q 011924 201 LLVAGGFQGELICKHLDRPGVS-FCSRTTYDDNAITNAVEIYGSP-SGAVHFTASNNDCGVRDFDMGKY-------QLSK 271 (475)
Q Consensus 201 ~lvsg~~dg~i~vw~~~~~~~~-~~~~~~~~~~~~v~~l~~~~s~-~g~~~l~s~s~dg~v~iwd~~~~-------~~~~ 271 (475)
++++|+.+|.|++|++...+.. .....+.+|.+.|.+++| +| ++. +|++|+.||+|++|++.++ +.+.
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~--~p~~~~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~ 125 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAW--CPHNDN-VIASGSEDCTVMVWEIPDGGLVLPLREPVI 125 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEE--CTTCTT-EEEEEETTSEEEEEECCTTCCSSCBCSCSE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEe--CCCCCC-EEEEEeCCCeEEEEEccCCCCccccCCceE
Confidence 3345788999999999765322 112456689999999999 99 676 4999999999999999887 4455
Q ss_pred eee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCC-cEEEEEeCCCcEEEEECCCCceEEEe--ecCC
Q 011924 272 HFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDG-KLLIIVGDNPDGLLVDSMTGKTIASL--CGHL 347 (475)
Q Consensus 272 ~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~dg~i~iwd~~~~~~~~~l--~~h~ 347 (475)
.+. |...|. +++|+|++ ++|++++.|+.|++||+++++.+..+ .+|.
T Consensus 126 ~~~~h~~~v~-----------------------------~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 176 (402)
T 2aq5_A 126 TLEGHTKRVG-----------------------------IVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHP 176 (402)
T ss_dssp EEECCSSCEE-----------------------------EEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCC
T ss_pred EecCCCCeEE-----------------------------EEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCC
Confidence 555 778888 99999998 69999999999999999999999999 7899
Q ss_pred CCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEE-ecCCCc-eEEEEEccCCCEEEEE---cCCCeEEEEECCCC
Q 011924 348 DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL-KGNLGA-IRSIRYTSDGRYMATA---EPADFVHVYDVKSG 422 (475)
Q Consensus 348 ~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~-~~~~~~-v~~l~~spdg~~la~~---~~dg~i~iwd~~~~ 422 (475)
..|.+++|+|++++|++++.|++|++||+++ ++.+..+ .+|.+. +.+++|+|+|++|++| +.++.|++||+.++
T Consensus 177 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 177 DTIYSVDWSRDGALICTSCRDKRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBC
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccc
Confidence 9999999999999999999999999999987 7777777 677765 8999999999999999 78999999999886
Q ss_pred ee-EEE-EeccCCCeEEEEEcCCCCeEEEEE-ecCCcc
Q 011924 423 YE-KEQ-EIDFFGEISGISFSPDTESLFIGV-WDRTYG 457 (475)
Q Consensus 423 ~~-~~~-~~~~~~~i~~l~fspdg~~l~~~~-~D~~~~ 457 (475)
.. +.. ...+...+.+++|+|++++|++++ .|+.+.
T Consensus 256 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~ 293 (402)
T 2aq5_A 256 EEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIR 293 (402)
T ss_dssp SSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEE
T ss_pred cCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEE
Confidence 54 222 235678899999999999998665 577653
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.3e-29 Score=269.59 Aligned_cols=237 Identities=14% Similarity=0.161 Sum_probs=202.6
Q ss_pred cceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCC--CCeEEEEEeCCCeEEEEE
Q 011924 188 TQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFD 263 (475)
Q Consensus 188 ~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~--g~~~l~s~s~dg~v~iwd 263 (475)
+...|++++| ++++|++|+.||.|++|++..... .+.....+|.+.|.+++| +|+ ++. +++|+.||+|++||
T Consensus 8 H~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~--s~~~~~~~-l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDW--AHPKFGTI-LASCSYDGKVLIWK 83 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-EEEEEECCCSSCEEEEEE--CCTTSCSE-EEEEETTSCEEEEE
T ss_pred CcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-ccceeccCCcCceEEEEe--cCCCCCCE-EEEEeCCCeEEEEE
Confidence 3457999999 789999999999999999874332 334567789999999999 877 775 99999999999999
Q ss_pred CCCCe--eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC--CcEEEEEeCCCcEEEEECCCC-
Q 011924 264 MGKYQ--LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD--GKLLIIVGDNPDGLLVDSMTG- 337 (475)
Q Consensus 264 ~~~~~--~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~dg~i~iwd~~~~- 337 (475)
+.+++ ....+. +..+|. +++|+|+ ++.+++++.||.|++||++++
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~-----------------------------~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVN-----------------------------SVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp EETTEEEEEEEECCCSSCEE-----------------------------EEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred CCCCcccccccccCCCCCeE-----------------------------EEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 98876 444444 778888 9999999 999999999999999999877
Q ss_pred -ceEEEeecCCCCeEEEEEec-------------CCCEEEEEeCCCeEEEEECCCCC---ceEEEEecCCCceEEEEEcc
Q 011924 338 -KTIASLCGHLDFSFASAWHP-------------NGVTFATGNQDKTCRIWDLRNLS---ESVAVLKGNLGAIRSIRYTS 400 (475)
Q Consensus 338 -~~~~~l~~h~~~v~~~~~sp-------------~g~~l~t~s~dg~v~iwd~~~~~---~~~~~~~~~~~~v~~l~~sp 400 (475)
.....+.+|...|.+++|+| ++.+|++|+.||+|++||++... .+...+.+|.+.|++++|+|
T Consensus 135 ~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp 214 (753)
T 3jro_A 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (753)
T ss_dssp CCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred CcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc
Confidence 34556788999999999999 58999999999999999998643 45677888999999999999
Q ss_pred C---CCEEEEEcCCCeEEEEECCCCe-----eEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 401 D---GRYMATAEPADFVHVYDVKSGY-----EKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 401 d---g~~la~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
+ |++|++++.||.|++||+.++. .......|.+.|.+++|+|+|++|++|+.|+.+.
T Consensus 215 ~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~ 279 (753)
T 3jro_A 215 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 279 (753)
T ss_dssp CCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEE
T ss_pred CCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEE
Confidence 9 8999999999999999998864 2223334778999999999999999999998764
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.2e-28 Score=230.88 Aligned_cols=224 Identities=14% Similarity=0.151 Sum_probs=196.0
Q ss_pred ceeEEEEEE-cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 189 QTQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 189 ~~~v~~l~~-~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
...|.++++ ++++|++|+.||.|++|++...... .....|...|.+++| +|+++. +++++.|+.|++|++...
T Consensus 18 ~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~---~~~~~~~~~v~~~~~--~~~~~~-l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 18 DQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLG---TVVYTGQGFLNSVCY--DSEKEL-LLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp SSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEE---EEEEECSSCEEEEEE--ETTTTE-EEEEETTSCEEEEETTCC
T ss_pred CCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEE---EEeecCCccEEEEEE--CCCCCE-EEEecCCCeEEEEEeeec
Confidence 347999998 8999999999999999999754433 555678899999999 999986 999999999999998653
Q ss_pred ---eeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEe
Q 011924 268 ---QLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL 343 (475)
Q Consensus 268 ---~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l 343 (475)
+....+. +..++. +++| +++++++++.++.|++|| .++.+..+
T Consensus 92 ~~~~~~~~~~~~~~~i~-----------------------------~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~ 138 (313)
T 3odt_A 92 SGEDPLYTLIGHQGNVC-----------------------------SLSF--QDGVVISGSWDKTAKVWK--EGSLVYNL 138 (313)
T ss_dssp TTSCC-CEECCCSSCEE-----------------------------EEEE--ETTEEEEEETTSEEEEEE--TTEEEEEE
T ss_pred CCCCcccchhhcccCEE-----------------------------EEEe--cCCEEEEEeCCCCEEEEc--CCcEEEec
Confidence 4444444 677788 8888 678999999999999999 77888899
Q ss_pred ecCCCCeEEEEEec-CCCEEEEEeCCCeEEEEECCCCCceEEEEec-CCCceEEEEEccCCCEEEEEcCCCeEEEEECCC
Q 011924 344 CGHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 421 (475)
Q Consensus 344 ~~h~~~v~~~~~sp-~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~-~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~ 421 (475)
..|...+.+++|+| +++++++++.|+.|++||. ......+.. +...+.+++|+|+++ |++++.++.|++||+++
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~---~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQN---DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT 214 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET---TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEec---CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc
Confidence 99999999999999 9999999999999999994 567777777 889999999999998 89999999999999999
Q ss_pred CeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 422 GYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 422 ~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
++.+..+..|.+.|.+++|+|++ .|++++.|+.+
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v 248 (313)
T 3odt_A 215 GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTV 248 (313)
T ss_dssp CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEE
T ss_pred hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEE
Confidence 99999999999999999999999 68888888765
No 98
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.4e-27 Score=239.91 Aligned_cols=251 Identities=13% Similarity=0.198 Sum_probs=214.3
Q ss_pred eeEEEEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCee
Q 011924 190 TQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (475)
Q Consensus 190 ~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~ 269 (475)
..+.++++++++|++|+.||.|++|++.+.... ..+.+|.+.|.++.+ + ++ ++++|+.||+|++||+.+++.
T Consensus 120 ~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~---~~~~~h~~~v~~~~~--~--~~-~l~s~~~dg~i~vwd~~~~~~ 191 (445)
T 2ovr_B 120 HVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQM--R--DN-IIISGSTDRTLKVWNAETGEC 191 (445)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTCCEE---EECCCCSSCEEEEEE--E--TT-EEEEEETTSCEEEEETTTTEE
T ss_pred CcEEEEEEcCCEEEEEECCCcEEEEECCCCcEE---EEEcCCCCCEEEEEe--c--CC-EEEEEeCCCeEEEEECCcCcE
Confidence 357889999999999999999999999876544 566789999999999 5 44 599999999999999999998
Q ss_pred eeeee-ccccEE-eccCCceEE------EEEEeecccceEEEEee----eeeeEEECCCCcEEEEEeCCCcEEEEECCCC
Q 011924 270 SKHFR-FPWPVN-VSSSYCIIL------LCRLLNFMTEKVIICLL----CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTG 337 (475)
Q Consensus 270 ~~~~~-~~~~v~-~s~~~~~l~------~~~v~d~~~~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~ 337 (475)
+..+. +...+. +..++..++ .+++||..+++...... .+.++++ +++++++++.|+.|++||++++
T Consensus 192 ~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~ 269 (445)
T 2ovr_B 192 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE 269 (445)
T ss_dssp EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT
T ss_pred EEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC
Confidence 88776 555554 222333342 68999999988776554 5778888 7889999999999999999999
Q ss_pred ceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEE
Q 011924 338 KTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 417 (475)
Q Consensus 338 ~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iw 417 (475)
+++..+.+|...|.+++| ++.++++++.|++|++||+++ ++++..+.+|...+.++.++ +++|++++.||.|++|
T Consensus 270 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vw 344 (445)
T 2ovr_B 270 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW 344 (445)
T ss_dssp EEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT-CCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred cEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC-CCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEE
Confidence 999999999999999999 889999999999999999987 78889999999999888774 6799999999999999
Q ss_pred ECCCCeeEEEEec---cCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 418 DVKSGYEKEQEID---FFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 418 d~~~~~~~~~~~~---~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
|+.++..+..+.. |.+.|.+++|+ +++|++|+.|+.+.
T Consensus 345 d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~ 385 (445)
T 2ovr_B 345 DIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVK 385 (445)
T ss_dssp ETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEE
T ss_pred ECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEE
Confidence 9999998888876 77899999996 57999999998663
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-28 Score=247.60 Aligned_cols=193 Identities=16% Similarity=0.089 Sum_probs=168.1
Q ss_pred CCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC--CCeeeeeee---ccccEEeccCCceEEEEEEeecccceEEEEe
Q 011924 231 DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG--KYQLSKHFR---FPWPVNVSSSYCIILLCRLLNFMTEKVIICL 305 (475)
Q Consensus 231 ~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~--~~~~~~~~~---~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~ 305 (475)
|.+.|.+++| +|+|+.++++++.|++|++|++. +++.+..+. +...+.
T Consensus 101 ~~~~v~~~~~--s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~------------------------- 153 (450)
T 2vdu_B 101 IYSYIRNLRL--TSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPN------------------------- 153 (450)
T ss_dssp CCCCEEEEEE--CTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEE-------------------------
T ss_pred cCCceEEEEE--cCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCce-------------------------
Confidence 3346999999 99999866899999999999998 777777663 567788
Q ss_pred eeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEE----EeecCCCCeEEEEEecC---CCEEEEEeCCCeEEEEECCC
Q 011924 306 LCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIA----SLCGHLDFSFASAWHPN---GVTFATGNQDKTCRIWDLRN 378 (475)
Q Consensus 306 ~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~----~l~~h~~~v~~~~~sp~---g~~l~t~s~dg~v~iwd~~~ 378 (475)
+++|+|++++|++++.++.+++|++.+++... .+.+|...|.+++|+|+ +++|++|+.|++|++||++.
T Consensus 154 ----~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 154 ----AISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp ----EEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred ----EEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 99999999999999999999999998877544 77889999999999999 99999999999999999987
Q ss_pred CCceEEE-EecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEec-------------------------cC
Q 011924 379 LSESVAV-LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID-------------------------FF 432 (475)
Q Consensus 379 ~~~~~~~-~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~-------------------------~~ 432 (475)
+..+.. +.+|.+.|++++|+ +|++|++++.|+.|+|||+.+++.+..+.. ..
T Consensus 230 -~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 230 -CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp -TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred -CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence 565655 66899999999999 999999999999999999999988877753 23
Q ss_pred CCeEEEEEcCCCCeEEEEE-ecCCc
Q 011924 433 GEISGISFSPDTESLFIGV-WDRTY 456 (475)
Q Consensus 433 ~~i~~l~fspdg~~l~~~~-~D~~~ 456 (475)
..|.+++|+|++++|++++ .|+.+
T Consensus 308 ~~v~~i~~~~~~~~l~~~~~~d~~i 332 (450)
T 2vdu_B 308 FAVSKIIKSKNLPFVAFFVEATKCI 332 (450)
T ss_dssp CCEEEEEECSSSSEEEEEETTCSEE
T ss_pred EEEEEEEEeCCCCEEEEEECCCCeE
Confidence 5689999999999999998 66544
No 100
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-27 Score=230.54 Aligned_cols=264 Identities=15% Similarity=0.183 Sum_probs=216.3
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
+..+.|+++...|++. .++.|.+|+..+++....+. + +...|.+++| ++++|++++.+|
T Consensus 35 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~----------------h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD--G----------------HTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp EEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC--C----------------CSSCEEEEEECTTSSEEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh--h----------------cCCcEEEEEEcCCCCEEEEEeCCC
Confidence 4555677777777775 47899999988776544332 1 2347999999 789999999999
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC-----CeEEEEECCCCeeee-----------ee
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVRDFDMGKYQLSK-----------HF 273 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d-----g~v~iwd~~~~~~~~-----------~~ 273 (475)
.|++|++....... ... +...+.+++| +|+++. +++++.+ +.|++|++....... .+
T Consensus 97 ~i~iwd~~~~~~~~---~~~-~~~~v~~~~~--~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 97 SIKLWDVSNGQCVA---TWK-SPVPVKRVEF--SPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp EEEEEETTTCCEEE---EEE-CSSCEEEEEE--CTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred eEEEEECCCCcEEE---Eee-cCCCeEEEEE--ccCCCE-EEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 99999998766542 222 6778999999 999986 7788788 999999987643211 11
Q ss_pred e------ccccEEeccCCceEE------EEEEeeccc-ceEEEEee----eeeeEEECCCCcEEEEEeCCCcEEEEECCC
Q 011924 274 R------FPWPVNVSSSYCIIL------LCRLLNFMT-EKVIICLL----CLQHSSQSPDGKLLIIVGDNPDGLLVDSMT 336 (475)
Q Consensus 274 ~------~~~~v~~s~~~~~l~------~~~v~d~~~-~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~ 336 (475)
. ....+.|++++..++ .+++||..+ ++...... .|.+++|+|++++|++++.++.|++||+++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 1 223455888888775 589999998 56555444 688999999999999999999999999999
Q ss_pred CceEEEeecCCCCeEEEEEecCCCEEEEEeCCC--------------eEEEEECCCCCceEEEEecCCCceEEEEEccCC
Q 011924 337 GKTIASLCGHLDFSFASAWHPNGVTFATGNQDK--------------TCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402 (475)
Q Consensus 337 ~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg--------------~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg 402 (475)
++.+..+. +...+.+++|+|+++++++++.++ .+++||+.. .+++..+.+|...|++++|+|+|
T Consensus 250 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 250 LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF-EEEIGRVQGHFGPLNTVAISPQG 327 (369)
T ss_dssp CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT-CCEEEEEECCSSCEEEEEECTTS
T ss_pred Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC-CcchhheecccCcEEEEEECCCC
Confidence 99998888 788899999999999999999988 899999977 78899999999999999999999
Q ss_pred CEEEEEcCCCeEEEEECCCCe
Q 011924 403 RYMATAEPADFVHVYDVKSGY 423 (475)
Q Consensus 403 ~~la~~~~dg~i~iwd~~~~~ 423 (475)
++|++++.||.|+||++.++.
T Consensus 328 ~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 328 TSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp SEEEEEETTSEEEEEEECHHH
T ss_pred CEEEEEcCCCeEEEEECcccc
Confidence 999999999999999998754
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=6.1e-29 Score=241.32 Aligned_cols=234 Identities=8% Similarity=0.073 Sum_probs=192.7
Q ss_pred cceeEEEEEE--cCc-EEEEEec---CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCC---CCeEEEEEeCCCe
Q 011924 188 TQTQVSTLAV--KDK-LLVAGGF---QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS---GAVHFTASNNDCG 258 (475)
Q Consensus 188 ~~~~v~~l~~--~~~-~lvsg~~---dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~---g~~~l~s~s~dg~ 258 (475)
+...|.+++| ++. ++++|+. +|.|++|++....... .....|...|.+++| +|+ +.. |++++.|+.
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~--~~~~~~~~~v~~~~~--~~~~~~~~~-l~~~~~dg~ 91 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL--LREIEKAKPIKCGTF--GATSLQQRY-LATGDFGGN 91 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE--EEEEEESSCEEEEEC--TTCCTTTCC-EEEEETTSC
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc--eeeecccCcEEEEEE--cCCCCCCce-EEEecCCCe
Confidence 3458999999 564 5556666 9999999998766442 333467889999999 998 565 999999999
Q ss_pred EEEEECCCCe-eeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeE------EECCCCcEEEEEeCCCcEE
Q 011924 259 VRDFDMGKYQ-LSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHS------SQSPDGKLLIIVGDNPDGL 330 (475)
Q Consensus 259 v~iwd~~~~~-~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~------~~sp~g~~l~~~~~dg~i~ 330 (475)
|++||+.+++ .+..+. +...+. ++ +|+|++++|++++.|+.|+
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIIN-----------------------------AIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEE-----------------------------EEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred EEEEeCCCCCccEEEEEecccceE-----------------------------EEeeccccccCCCccEEEEEeCCCeEE
Confidence 9999999877 666666 777788 77 4688999999999999999
Q ss_pred EEECCCCc-eEEEeecCCC----CeEEEE----EecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEcc-
Q 011924 331 LVDSMTGK-TIASLCGHLD----FSFASA----WHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTS- 400 (475)
Q Consensus 331 iwd~~~~~-~~~~l~~h~~----~v~~~~----~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~sp- 400 (475)
+||+++++ ++..+..|.+ .+.+++ |+|++++|++++.|+.|++||++. .+. .....+...|.+++|+|
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRN-MAL-RWETNIKNGVCSLEFDRK 220 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEESCS
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECcc-Cce-eeecCCCCceEEEEcCCC
Confidence 99999887 7788876655 788888 788999999999999999999986 444 44466788999999999
Q ss_pred --CCCEEEEEcCCCeEEEEECCCCeeEEEEe-----ccCCCeEEEEEcCCCC-eEEEEEecCCcc
Q 011924 401 --DGRYMATAEPADFVHVYDVKSGYEKEQEI-----DFFGEISGISFSPDTE-SLFIGVWDRTYG 457 (475)
Q Consensus 401 --dg~~la~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~i~~l~fspdg~-~l~~~~~D~~~~ 457 (475)
++++|++++.|+.|++||++++.....+. .|.+.|.+++|+|+++ +|++|+.|+.+.
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 285 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLH 285 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEE
Confidence 99999999999999999998876554444 8999999999999998 899999998764
No 102
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=3.7e-27 Score=227.24 Aligned_cols=270 Identities=19% Similarity=0.234 Sum_probs=203.9
Q ss_pred eecccceeE-EecCC-CeEEEe-cCCeEEEEecCCCCce---EEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCc
Q 011924 129 LHFQLRNLV-WATSK-HDVYLM-SHFSVIHWSSLTSSRS---QVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDK 200 (475)
Q Consensus 129 ~h~~lr~l~-~~~~~-~~v~~~-~~~~v~~w~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~ 200 (475)
.|....+.+ |.+.. ..|+.. .|+.|++|+..+.... ....+.+ +...|.+++| +++
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~----------------h~~~V~~~~~s~dg~ 99 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG----------------HSHFVSDVVISSDGQ 99 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC----------------CSSCEEEEEECTTSS
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC----------------CCCCEEEEEECCCCC
Confidence 465544444 66653 455554 5799999997665432 1112222 2347999999 899
Q ss_pred EEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee--ccc-
Q 011924 201 LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPW- 277 (475)
Q Consensus 201 ~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~- 277 (475)
+|++|+.||.|++|+....... .....+...+..+.+ ++.+.. +++++.|+.+++||+.......... +..
T Consensus 100 ~l~s~~~d~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~-l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~ 173 (340)
T 4aow_A 100 FALSGSWDGTLRLWDLTTGTTT---RRFVGHTKDVLSVAF--SSDNRQ-IVSGSRDKTIKLWNTLGVCKYTVQDESHSEW 173 (340)
T ss_dssp EEEEEETTSEEEEEETTTTEEE---EEEECCSSCEEEEEE--CTTSSC-EEEEETTSCEEEECTTSCEEEEECSSSCSSC
T ss_pred EEEEEcccccceEEeeccccee---eeecCCCCceeEEEE--eecCcc-ceeecCCCeEEEEEeCCCceEEEEeccccCc
Confidence 9999999999999998865544 344456666777777 899886 8999999999999997654433221 333
Q ss_pred --cEEeccCCc--eEE------EEEEeecccceEEEEee----eeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEe
Q 011924 278 --PVNVSSSYC--IIL------LCRLLNFMTEKVIICLL----CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL 343 (475)
Q Consensus 278 --~v~~s~~~~--~l~------~~~v~d~~~~~~~~~~~----~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l 343 (475)
.+.|++.+. .++ .+++||..+++...... .|.+++|+|++++|++++.|+.|++||+++++++..+
T Consensus 174 v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 174 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 334555432 222 58999999988876654 6889999999999999999999999999999999888
Q ss_pred ecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEE---------ecCCCceEEEEEccCCCEEEEEcCCCeE
Q 011924 344 CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL---------KGNLGAIRSIRYTSDGRYMATAEPADFV 414 (475)
Q Consensus 344 ~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~---------~~~~~~v~~l~~spdg~~la~~~~dg~i 414 (475)
.+ ...+.+++|+|++.+ ++++.|++|++||++. ...+..+ .+|...|++++|+|+|++|++|+.||.|
T Consensus 254 ~~-~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v 330 (340)
T 4aow_A 254 DG-GDIINALCFSPNRYW-LCAATGPSIKIWDLEG-KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 330 (340)
T ss_dssp EC-SSCEEEEEECSSSSE-EEEEETTEEEEEETTT-TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred cC-CceEEeeecCCCCce-eeccCCCEEEEEECCC-CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 85 467999999998765 5566799999999976 5544444 3577899999999999999999999999
Q ss_pred EEEECCCCe
Q 011924 415 HVYDVKSGY 423 (475)
Q Consensus 415 ~iwd~~~~~ 423 (475)
+|||+++|+
T Consensus 331 ~iW~~~tGt 339 (340)
T 4aow_A 331 RVWQVTIGT 339 (340)
T ss_dssp EEEEEEC--
T ss_pred EEEeCCCcC
Confidence 999999985
No 103
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=5.4e-28 Score=234.62 Aligned_cols=200 Identities=14% Similarity=0.126 Sum_probs=172.7
Q ss_pred EeeecCCCCceeEEEEEe---CC-CCCeEEEEEeCCCeEEEEECCCC-------eeeeeee-ccccEEeccCCceEEEEE
Q 011924 225 SRTTYDDNAITNAVEIYG---SP-SGAVHFTASNNDCGVRDFDMGKY-------QLSKHFR-FPWPVNVSSSYCIILLCR 292 (475)
Q Consensus 225 ~~~~~~~~~~v~~l~~~~---s~-~g~~~l~s~s~dg~v~iwd~~~~-------~~~~~~~-~~~~v~~s~~~~~l~~~~ 292 (475)
...+.+|...|++++|.+ ++ +++ +|++|+.|++|++||+... .....+. |...|.
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~------------ 80 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS------------ 80 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEE------------
T ss_pred eeeeccchhhhhheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceE------------
Confidence 456778999999998843 23 666 4999999999999999753 2334444 677888
Q ss_pred EeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEE
Q 011924 293 LLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCR 372 (475)
Q Consensus 293 v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~ 372 (475)
+++|+|++.++++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|+
T Consensus 81 -----------------~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 81 -----------------DLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIK 143 (343)
T ss_dssp -----------------EEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEE
T ss_pred -----------------EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCceEEEEe---cCCCceEEEEEccCC----------CEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEE
Q 011924 373 IWDLRNLSESVAVLK---GNLGAIRSIRYTSDG----------RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS 439 (475)
Q Consensus 373 iwd~~~~~~~~~~~~---~~~~~v~~l~~spdg----------~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~ 439 (475)
+||+.. ....... +|...|.+++|+|++ .+|++++.|+.|++|| .++.....+..|.+.|.+++
T Consensus 144 ~wd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 144 LWNILG--ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLS 220 (343)
T ss_dssp EEESSS--CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEE
T ss_pred EEeccC--CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEE
Confidence 999963 3333333 677899999999987 7999999999999999 45667778889999999999
Q ss_pred EcCCCCeEEEEEecCCcc
Q 011924 440 FSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 440 fspdg~~l~~~~~D~~~~ 457 (475)
|+|+|++|++|+.|+++.
T Consensus 221 ~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 221 ISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp ECTTSSEEEEEETTCEEE
T ss_pred ECCCCCEEEEEcCCCeEE
Confidence 999999999999998764
No 104
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-29 Score=242.50 Aligned_cols=222 Identities=7% Similarity=0.028 Sum_probs=174.8
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC---------Ce
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK---------YQ 268 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~---------~~ 268 (475)
++.+|++|+.||.|++|++.......... ...|.++.+ +|. +++++.|++|++|+... ++
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~--~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT-----TPNPRTGGE--HPA----IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE-----EECCCTTCC--CCS----EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe-----cCCceeeee--CCc----eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 78899999999999999998776553222 344666666 676 88999999999997753 33
Q ss_pred eeeeee--ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC--CCcEEEEEeCCCcEEEEECCCCceEEEee
Q 011924 269 LSKHFR--FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP--DGKLLIIVGDNPDGLLVDSMTGKTIASLC 344 (475)
Q Consensus 269 ~~~~~~--~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp--~g~~l~~~~~dg~i~iwd~~~~~~~~~l~ 344 (475)
.+..+. +..+|. +++|+| +++++++++.|+.|++||+++++.+..+.
T Consensus 116 ~~~~~~~~~~~~v~-----------------------------~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~ 166 (343)
T 3lrv_A 116 VLREIEVDSANEII-----------------------------YMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS 166 (343)
T ss_dssp EEEEEECCCSSCEE-----------------------------EEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC
T ss_pred eeEEeecCCCCCEE-----------------------------EEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 333332 334566 999999 99999999999999999999999877664
Q ss_pred c-CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceE-EEEec-CCCceEEEEEccCCCEEEEEcCCCeEEEEECCC
Q 011924 345 G-HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESV-AVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 421 (475)
Q Consensus 345 ~-h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~-~~~~~-~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~ 421 (475)
. |...+.+++|+|++.+|++|+.|++|+|||+++ ++.+ ..+.. |.++|++++|+|+|++|++++ ++.|+|||+++
T Consensus 167 ~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~ 244 (343)
T 3lrv_A 167 AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS-PDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK 244 (343)
T ss_dssp CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC-TTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC
Confidence 4 556899999999999999999999999999988 4544 77887 999999999999999999999 55999999998
Q ss_pred CeeEEEEec---cCCCeE--EEEEcCCCCeEEEEEe-cCCcceEEEE
Q 011924 422 GYEKEQEID---FFGEIS--GISFSPDTESLFIGVW-DRTYGSLLEY 462 (475)
Q Consensus 422 ~~~~~~~~~---~~~~i~--~l~fspdg~~l~~~~~-D~~~~~ll~~ 462 (475)
+..+..+.. |...+. +++|+|+|++|++++. |+.+ .+..+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i-~v~~~ 290 (343)
T 3lrv_A 245 DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSL-TIYKF 290 (343)
T ss_dssp STTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEE-EEEEE
T ss_pred CCcceeecccccccccccceEEEECCCCCEEEEecCCCCcE-EEEEE
Confidence 866544333 333343 6999999999999988 7654 34433
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.6e-27 Score=238.94 Aligned_cols=222 Identities=15% Similarity=0.220 Sum_probs=198.7
Q ss_pred eeEEEEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCee
Q 011924 190 TQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (475)
Q Consensus 190 ~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~ 269 (475)
..|.++++++++|++|+.+|.|++|++.+.... ..+.+|.+.|.++++ +++ ++++|+.||+|++||+.+++.
T Consensus 134 ~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~---~~~~~h~~~v~~l~~----~~~-~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 134 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECK---RILTGHTGSVLCLQY----DER-VIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CCEEEEECCSSEEEEEESSSCEEEEESSSCCEE---EEECCCSSCEEEEEC----CSS-EEEEEETTSCEEEEESSSCCE
T ss_pred CcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEE---EEEcCCCCcEEEEEE----CCC-EEEEEcCCCeEEEEECCCCcE
Confidence 479999999999999999999999999875544 566789999999877 555 499999999999999999998
Q ss_pred eeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceE---EEeec
Q 011924 270 SKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI---ASLCG 345 (475)
Q Consensus 270 ~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~---~~l~~ 345 (475)
+..+. +...+. +++|++ ..+++++.|+.|++||+.++..+ ..+.+
T Consensus 206 ~~~~~~h~~~v~-----------------------------~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 254 (435)
T 1p22_A 206 LNTLIHHCEAVL-----------------------------HLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVG 254 (435)
T ss_dssp EEEECCCCSCEE-----------------------------EEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECC
T ss_pred EEEEcCCCCcEE-----------------------------EEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecC
Confidence 88877 777888 888874 59999999999999999987755 67789
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeE
Q 011924 346 HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEK 425 (475)
Q Consensus 346 h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~ 425 (475)
|...|.+++| ++++|++|+.|++|++||+++ ++++..+.+|...|.+++|+ +++|++|+.|+.|++||+.++..+
T Consensus 255 ~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 255 HRAAVNVVDF--DDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCc-CcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEE
Confidence 9999999999 788999999999999999987 78899999999999999984 679999999999999999999999
Q ss_pred EEEeccCCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 426 EQEIDFFGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 426 ~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
..+..|.+.|.+++| ++.+|++|+.|+.+.
T Consensus 330 ~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 330 RVLEGHEELVRCIRF--DNKRIVSGAYDGKIK 359 (435)
T ss_dssp EEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred EEEeCCcCcEEEEEe--cCCEEEEEeCCCcEE
Confidence 999999999999999 788999999998874
No 106
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.9e-28 Score=260.89 Aligned_cols=226 Identities=13% Similarity=0.077 Sum_probs=189.9
Q ss_pred eeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 190 TQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 190 ~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
..|++++| ++++||+|+.||.|++|+...... .....|...|.+++| +| |+ +|++++.|++|++||+.++
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~----~~~~~~~~~V~~l~f--sp-g~-~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEV----VIKLEDRSAIKEMRF--VK-GI-YLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEE----EEECSSCCCEEEEEE--ET-TT-EEEEEETTCEEEEEETTTC
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEE----EEEcCCCCCEEEEEE--cC-CC-EEEEEECcCeEEEEECCCC
Confidence 47999999 899999999999999999865332 223457788999999 88 77 5999999999999999999
Q ss_pred eeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceE-------
Q 011924 268 QLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI------- 340 (475)
Q Consensus 268 ~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~------- 340 (475)
+++..+.+...|. +++|+|++++|++|+.||.|++||+++++..
T Consensus 90 ~~~~~~~~~~~V~-----------------------------~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~ 140 (902)
T 2oaj_A 90 KVLTTVFVPGKIT-----------------------------SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNL 140 (902)
T ss_dssp SEEEEEECSSCEE-----------------------------EEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCH
T ss_pred cEEEEEcCCCCEE-----------------------------EEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccc
Confidence 9888888888888 9999999999999999999999999988753
Q ss_pred ----EEeecCCCCeEEEEEecC-CCEEEEEeCCCeEEEEECCCCCceEEEEecC------------------CCceEEEE
Q 011924 341 ----ASLCGHLDFSFASAWHPN-GVTFATGNQDKTCRIWDLRNLSESVAVLKGN------------------LGAIRSIR 397 (475)
Q Consensus 341 ----~~l~~h~~~v~~~~~sp~-g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~------------------~~~v~~l~ 397 (475)
..+.+|.+.|.+++|+|+ +..|++|+.|++| +||++. ++++..+..| ...|++++
T Consensus 141 ~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~ 218 (902)
T 2oaj_A 141 QKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSL 218 (902)
T ss_dssp HHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEE
T ss_pred cccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccCCCeEEEE
Confidence 234679999999999995 5799999999999 999987 7778777765 46799999
Q ss_pred EccCCCEEEEEcCCCeEEEEECCCCeeEEEEe-----c-------------cCCCeEEEEEc----CCC-CeEEEEEecC
Q 011924 398 YTSDGRYMATAEPADFVHVYDVKSGYEKEQEI-----D-------------FFGEISGISFS----PDT-ESLFIGVWDR 454 (475)
Q Consensus 398 ~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~-----~-------------~~~~i~~l~fs----pdg-~~l~~~~~D~ 454 (475)
|+|+|++||+|+.|+.|+|||+++++++.... . |.+.|.+++|+ |++ ..|++|+.|.
T Consensus 219 fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~ 298 (902)
T 2oaj_A 219 YHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSIS 298 (902)
T ss_dssp ECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECST
T ss_pred EcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCC
Confidence 99999999999999999999999987765311 1 24479999995 444 4566776764
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=4.6e-27 Score=226.35 Aligned_cols=259 Identities=15% Similarity=0.150 Sum_probs=198.7
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCce--EEEeccCCCCCCCCCCCCccccccceeEEEEEE----cCcEEEEE
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRS--QVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV----KDKLLVAG 205 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~----~~~~lvsg 205 (475)
...+.|.++...|+.. .++.|.+|+..++... .+..+.+ +...|.+++| ++++|++|
T Consensus 14 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA----------------HDSSIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC----------------CSSCEEEEEECCGGGCSEEEEE
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceecc----------------CCCcEEEEEEcCCCCCCEEEEE
Confidence 3445577777767665 4689999998765432 2212221 3347999999 28999999
Q ss_pred ecCceEEEEeCCCCCc------eEEEeeecCCCCceeEEEEEeCCC--CCeEEEEEeCCCeEEEEECCCCeeeeeeeccc
Q 011924 206 GFQGELICKHLDRPGV------SFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW 277 (475)
Q Consensus 206 ~~dg~i~vw~~~~~~~------~~~~~~~~~~~~~v~~l~~~~s~~--g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~ 277 (475)
+.||.|++|++..... .........|...|.+++| +|+ +.. +++++.|+.|++||+.+++.+..+....
T Consensus 78 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 154 (351)
T 3f3f_A 78 SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKF--APAHLGLK-LACLGNDGILRLYDALEPSDLRSWTLTS 154 (351)
T ss_dssp ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEE--CCGGGCSE-EEEEETTCEEEEEECSSTTCTTCCEEEE
T ss_pred cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEE--cCCCCCcE-EEEecCCCcEEEecCCChHHhccccccc
Confidence 9999999999986532 1234566788999999999 998 875 8999999999999998877655443211
Q ss_pred cEE---eccCCceEEEEEEeecccceEEEEeeeeeeEEECCC---CcEEEEEeCCCcEEEEECCCCce--EEEeecCCCC
Q 011924 278 PVN---VSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD---GKLLIIVGDNPDGLLVDSMTGKT--IASLCGHLDF 349 (475)
Q Consensus 278 ~v~---~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~---g~~l~~~~~dg~i~iwd~~~~~~--~~~l~~h~~~ 349 (475)
.+. +.+. .....+.+++|+|+ +.++++++.++.+.+|+...++. +..+.+|...
T Consensus 155 ~~~~~~~~~~------------------~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 155 EMKVLSIPPA------------------NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEESCSCCCS------------------SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC
T ss_pred cccccccccC------------------CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc
Confidence 111 0000 00112339999997 99999999999998888887765 6778899999
Q ss_pred eEEEEEecCC----CEEEEEeCCCeEEEEECCCC---------------------------------------------C
Q 011924 350 SFASAWHPNG----VTFATGNQDKTCRIWDLRNL---------------------------------------------S 380 (475)
Q Consensus 350 v~~~~~sp~g----~~l~t~s~dg~v~iwd~~~~---------------------------------------------~ 380 (475)
|.+++|+|++ ++|++++.||+|++||++.. .
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 9999999998 89999999999999999752 1
Q ss_pred ceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEE
Q 011924 381 ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE 428 (475)
Q Consensus 381 ~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~ 428 (475)
+++..+.+|...|++++|+|+|++|++++.||.|+||++.++.....+
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred cEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 567778889999999999999999999999999999999987655443
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-27 Score=232.97 Aligned_cols=240 Identities=16% Similarity=0.217 Sum_probs=192.3
Q ss_pred cceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--c--CcEEEEEec
Q 011924 133 LRNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--K--DKLLVAGGF 207 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~--~~~lvsg~~ 207 (475)
+..+.|.++...|++. .++.|.+|+........+..+.+ +..+|.+++| + +++|++|+.
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG----------------HEGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC----------------CSSCEEEEEECCGGGCSEEEEEET
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecC----------------CCCcEEEEEeCCCCCCCEEEEecc
Confidence 3455577777777776 47899999986544444333332 2347999999 3 899999999
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCC--CCeEEEEEeCCCeEEEEECCCCeeee--ee-eccccEEec
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGKYQLSK--HF-RFPWPVNVS 282 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~--g~~~l~s~s~dg~v~iwd~~~~~~~~--~~-~~~~~v~~s 282 (475)
||.|++|++...... .......|...|.+++| +|+ +.. +++++.|+.|++||+....... .+ .+...+.
T Consensus 78 dg~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~--~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~-- 151 (379)
T 3jrp_A 78 DGKVLIWKEENGRWS-QIAVHAVHSASVNSVQW--APHEYGPL-LLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN-- 151 (379)
T ss_dssp TSCEEEEEEETTEEE-EEEEECCCSSCEEEEEE--CCGGGCSE-EEEEETTSEEEEEECCTTSCCCEEEEECCTTCEE--
T ss_pred CCEEEEEEcCCCcee-EeeeecCCCcceEEEEe--CCCCCCCE-EEEecCCCcEEEEecCCCCceeeEEecCCCCceE--
Confidence 999999999875422 24556678899999999 998 775 9999999999999998764322 22 3677888
Q ss_pred cCCceEEEEEEeecccceEEEEeeeeeeEEECC-------------CCcEEEEEeCCCcEEEEECCCCc----eEEEeec
Q 011924 283 SSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-------------DGKLLIIVGDNPDGLLVDSMTGK----TIASLCG 345 (475)
Q Consensus 283 ~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-------------~g~~l~~~~~dg~i~iwd~~~~~----~~~~l~~ 345 (475)
+++|+| ++.+|++++.|+.|++||+++++ .+..+.+
T Consensus 152 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 152 ---------------------------SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp ---------------------------EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred ---------------------------EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec
Confidence 999999 69999999999999999998765 4567788
Q ss_pred CCCCeEEEEEecC---CCEEEEEeCCCeEEEEECCCCCc--eEEEE--ecCCCceEEEEEccCCCEEEEEcCCCeEEEEE
Q 011924 346 HLDFSFASAWHPN---GVTFATGNQDKTCRIWDLRNLSE--SVAVL--KGNLGAIRSIRYTSDGRYMATAEPADFVHVYD 418 (475)
Q Consensus 346 h~~~v~~~~~sp~---g~~l~t~s~dg~v~iwd~~~~~~--~~~~~--~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd 418 (475)
|...|.+++|+|+ +++|++++.||+|++||++.... ....+ ..+...|++++|+|+|++|++++.||.|+||+
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 9999999999999 89999999999999999986422 12222 23778999999999999999999999999999
Q ss_pred CCC
Q 011924 419 VKS 421 (475)
Q Consensus 419 ~~~ 421 (475)
+..
T Consensus 285 ~~~ 287 (379)
T 3jrp_A 285 ENL 287 (379)
T ss_dssp EEE
T ss_pred CCC
Confidence 874
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.1e-26 Score=230.10 Aligned_cols=273 Identities=13% Similarity=0.036 Sum_probs=216.3
Q ss_pred ccceeEEecCCCeEEEec--CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEec
Q 011924 132 QLRNLVWATSKHDVYLMS--HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF 207 (475)
Q Consensus 132 ~lr~l~~~~~~~~v~~~~--~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~ 207 (475)
....+.|.+ ...+++.. ++.|.+|+..+++....+... ....+...|.++++ ++.++++++.
T Consensus 124 ~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~~~s~~~ 189 (433)
T 3bws_A 124 QPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPE-------------KYKKKLGFVETISIPEHNELWVSQMQ 189 (433)
T ss_dssp CBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCH-------------HHHTTCCEEEEEEEGGGTEEEEEEGG
T ss_pred CceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcc-------------cccccCCceeEEEEcCCCEEEEEECC
Confidence 344566776 55555543 467999998877655432211 00112347889999 7889999999
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEeccCCce
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCI 287 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~ 287 (475)
+|.|++|++...... .....|...+.+++| +|+++.++++++.++.|++||+.+++.+..+.....+.
T Consensus 190 d~~v~~~d~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~------- 257 (433)
T 3bws_A 190 ANAVHVFDLKTLAYK---ATVDLTGKWSKILLY--DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPR------- 257 (433)
T ss_dssp GTEEEEEETTTCCEE---EEEECSSSSEEEEEE--ETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEE-------
T ss_pred CCEEEEEECCCceEE---EEEcCCCCCeeEEEE--cCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCce-------
Confidence 999999999865544 344467788999999 99999866777789999999999998888877666677
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe--------CCCcEEEEECCCCceEEEeecCCCCeEEEEEecCC
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG--------DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNG 359 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~--------~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g 359 (475)
+++|+|+|+.+++++ .++.|++||+++++.+..+. |...+.+++|+|++
T Consensus 258 ----------------------~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g 314 (433)
T 3bws_A 258 ----------------------GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTE 314 (433)
T ss_dssp ----------------------EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSST
T ss_pred ----------------------EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCC
Confidence 999999999999887 48899999999998777664 66689999999999
Q ss_pred CEE-EEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcC---------------CCeEEEEECCCCe
Q 011924 360 VTF-ATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEP---------------ADFVHVYDVKSGY 423 (475)
Q Consensus 360 ~~l-~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~---------------dg~i~iwd~~~~~ 423 (475)
+.+ ++++.+++|++||+.+ ++.+..+. +...+.+++|+|+|++|++++. ||.|++||+.+++
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp TEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred CEEEEEecCCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 754 6668899999999976 67776665 5667999999999999988876 4699999999998
Q ss_pred eEEEEeccCCCeEEEEEcCCCCeEEEEEe-cCCc
Q 011924 424 EKEQEIDFFGEISGISFSPDTESLFIGVW-DRTY 456 (475)
Q Consensus 424 ~~~~~~~~~~~i~~l~fspdg~~l~~~~~-D~~~ 456 (475)
.+..+.. ...+.+++|+|+|++|++++. |+++
T Consensus 393 ~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 393 VKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQI 425 (433)
T ss_dssp EEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEE
T ss_pred EEEEecC-CCCCceEEEcCCCCEEEEEECCCCeE
Confidence 8777665 567999999999999998886 7654
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=3.8e-27 Score=230.76 Aligned_cols=194 Identities=10% Similarity=0.109 Sum_probs=158.1
Q ss_pred eEEEEEE--cCcEEEEE--ecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC
Q 011924 191 QVSTLAV--KDKLLVAG--GFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg--~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
.+.+++| +|++|+++ +.|+.|++||+.+..... .+ .|.+.|.+++| +|+|+. +++++ ++.+++|+..+
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~---~~-~~~~~V~~v~f--spdg~~-l~s~s-~~~~~~~~~~~ 206 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF---EI-ETRGEVKDLHF--STDGKV-VAYIT-GSSLEVISTVT 206 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE---EE-ECSSCCCEEEE--CTTSSE-EEEEC-SSCEEEEETTT
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE---Ee-CCCCceEEEEE--ccCCce-EEecc-ceeEEEEEecc
Confidence 3556666 89987654 478999999998755442 22 36678999999 999986 77876 45577777766
Q ss_pred Ceeeeeee---ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCC----cEEEEECCCCce
Q 011924 267 YQLSKHFR---FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNP----DGLLVDSMTGKT 339 (475)
Q Consensus 267 ~~~~~~~~---~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg----~i~iwd~~~~~~ 339 (475)
++.+.... +...+. +++|+|+++++++++.++ .+++|++..+..
T Consensus 207 ~~~~~~~~~~~~~~~v~-----------------------------~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~ 257 (365)
T 4h5i_A 207 GSCIARKTDFDKNWSLS-----------------------------KINFIADDTVLIAASLKKGKGIVLTKISIKSGNT 257 (365)
T ss_dssp CCEEEEECCCCTTEEEE-----------------------------EEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE
T ss_pred CcceeeeecCCCCCCEE-----------------------------EEEEcCCCCEEEEEecCCcceeEEeeccccccee
Confidence 66543322 566777 999999999999998776 588899876643
Q ss_pred ----EEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEE-ecCCCceEEEEEccCCCEEEEEcCCCeE
Q 011924 340 ----IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYMATAEPADFV 414 (475)
Q Consensus 340 ----~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~-~~~~~~v~~l~~spdg~~la~~~~dg~i 414 (475)
...+.+|...|.+++|+|+|++||+|+.|++|+|||+++ ++++..+ .+|..+|++++|+|||++||+|+.|++|
T Consensus 258 ~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 258 SVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp EEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred cceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC-CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 356778999999999999999999999999999999987 7777765 7899999999999999999999999999
Q ss_pred EEEECCCC
Q 011924 415 HVYDVKSG 422 (475)
Q Consensus 415 ~iwd~~~~ 422 (475)
+||++...
T Consensus 337 rvw~ip~~ 344 (365)
T 4h5i_A 337 HIIKLPLN 344 (365)
T ss_dssp EEEECCTT
T ss_pred EEEEcCCC
Confidence 99999754
No 111
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.2e-28 Score=240.93 Aligned_cols=224 Identities=10% Similarity=0.061 Sum_probs=179.8
Q ss_pred eEEEEEE--cCcEEEEEecCceEEEEeCCCCCc-------eEEE--------------------eeecCCCCceeEEEEE
Q 011924 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGV-------SFCS--------------------RTTYDDNAITNAVEIY 241 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~-------~~~~--------------------~~~~~~~~~v~~l~~~ 241 (475)
.|.+++| +|+++|+++.|++|+ +...... .+.. .....|...|.+++|
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vaw- 93 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKP- 93 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEE-
T ss_pred cEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEE-
Confidence 5778888 999999999999995 3221110 0000 111244678999999
Q ss_pred eCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccc-----cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC
Q 011924 242 GSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW-----PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD 316 (475)
Q Consensus 242 ~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-----~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~ 316 (475)
||+|.. |++++.||.|++|+... ++..+.+.. .+. +++|||+
T Consensus 94 -SPdG~~-LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~-----------------------------svafSPD 140 (588)
T 2j04_A 94 -SPIDDW-MAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYH-----------------------------CFEWNPI 140 (588)
T ss_dssp -CSSSSC-EEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEE-----------------------------EEEECSS
T ss_pred -CCCCCE-EEEEeCCCcEEEEeCCc--eeeeccCCCccccccEE-----------------------------EEEEcCC
Confidence 999997 99999999999999644 444444333 477 9999999
Q ss_pred CcEEEEEeCCCcEEEEECCCCc-------eEEEe----ecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCc--eE
Q 011924 317 GKLLIIVGDNPDGLLVDSMTGK-------TIASL----CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE--SV 383 (475)
Q Consensus 317 g~~l~~~~~dg~i~iwd~~~~~-------~~~~l----~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~--~~ 383 (475)
|++||+|+.||+|+|||+.+++ .+.++ .+|...|.+++|+|+| +++++.|++|++||+..... ..
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccce
Confidence 9999999999999999999886 36776 6788899999999999 88889999999999976331 34
Q ss_pred EEEe-cCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEE--cCCCCeEEEEEecCC
Q 011924 384 AVLK-GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF--SPDTESLFIGVWDRT 455 (475)
Q Consensus 384 ~~~~-~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~f--spdg~~l~~~~~D~~ 455 (475)
+++. +|...|.+++|+ |+.||+++ ++.|++||+.++.......+|.+.|.+++| +|++..|+++..||+
T Consensus 219 ~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 219 RMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp EEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred eeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 5664 788899999999 68999998 699999999988764455489999999999 999999999999987
No 112
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=4.7e-27 Score=249.65 Aligned_cols=199 Identities=16% Similarity=0.202 Sum_probs=176.9
Q ss_pred eeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC-----eeeeeee-ccccEEeccCCceEEEEEEeecccc
Q 011924 226 RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-----QLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTE 299 (475)
Q Consensus 226 ~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~-----~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~ 299 (475)
..+.+|...|++|++ +|++..+|++|+.|++|++|++.+. .....+. |...|.
T Consensus 376 ~~l~~H~~~V~~v~~--~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~------------------- 434 (694)
T 3dm0_A 376 GTMRAHTDMVTAIAT--PIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE------------------- 434 (694)
T ss_dssp EEEECCSSCEEEEEC--CTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEE-------------------
T ss_pred hhcccCCceeEEEEe--cCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEE-------------------
Confidence 456789999999999 8887667999999999999999753 2334444 788888
Q ss_pred eEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCC
Q 011924 300 KVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL 379 (475)
Q Consensus 300 ~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~ 379 (475)
+++|+|++++|++|+.|+.|+|||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|+|||+..
T Consensus 435 ----------~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~- 503 (694)
T 3dm0_A 435 ----------DVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG- 503 (694)
T ss_dssp ----------EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS-
T ss_pred ----------EEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC-
Confidence 999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CceEEEE----ecCCCceEEEEEccCC--CEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEec
Q 011924 380 SESVAVL----KGNLGAIRSIRYTSDG--RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 380 ~~~~~~~----~~~~~~v~~l~~spdg--~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D 453 (475)
.....+ .+|...|.+++|+|++ ..|++++.|+.|+|||+.++.....+..|.+.|.+++|+|+|++|++|+.|
T Consensus 504 -~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 504 -ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp -CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred -CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 333333 3577889999999987 689999999999999999999888999999999999999999999999999
Q ss_pred CCcc
Q 011924 454 RTYG 457 (475)
Q Consensus 454 ~~~~ 457 (475)
+++.
T Consensus 583 g~i~ 586 (694)
T 3dm0_A 583 GVVL 586 (694)
T ss_dssp SBCE
T ss_pred CeEE
Confidence 8874
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=6.5e-27 Score=220.71 Aligned_cols=239 Identities=13% Similarity=0.123 Sum_probs=168.9
Q ss_pred eEEEecCCeEEEEecCCC---CceEEEeccC-CCCCCCCCCC---C---ccccccceeEEEEEE--c----CcEEEEEec
Q 011924 144 DVYLMSHFSVIHWSSLTS---SRSQVLNVSG-HVAPSEKHPG---S---LLEGFTQTQVSTLAV--K----DKLLVAGGF 207 (475)
Q Consensus 144 ~v~~~~~~~v~~w~~~~~---~~~~~~~~~~-~~~~~~~~~~---~---~~~~~~~~~v~~l~~--~----~~~lvsg~~ 207 (475)
-|.+++...|.+|.+... +....+.+.. ++......|. . -+..+....|.+|++ + ++++++++.
T Consensus 56 ~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~ 135 (356)
T 2w18_A 56 CIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGN 135 (356)
T ss_dssp EEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEE
T ss_pred EEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCC
Confidence 467788999999999987 3444444433 1111111111 0 123444456667766 5 566666553
Q ss_pred --------------------CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCC---CCCeEEEEEeCCCeEEEEEC
Q 011924 208 --------------------QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSP---SGAVHFTASNNDCGVRDFDM 264 (475)
Q Consensus 208 --------------------dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~---~g~~~l~s~s~dg~v~iwd~ 264 (475)
++.|++|++...+.. ......|...+..++| ++ ++. +|++++.|++|+|||+
T Consensus 136 ~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~--~~s~~~~~~~v~~l~f--s~~~g~~~-~LaSgS~D~TIkIWDl 210 (356)
T 2w18_A 136 IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGG--KENQFLMPPEETILTF--AEVQGMQE-ALLGTTIMNNIVIWNL 210 (356)
T ss_dssp EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCE--EEEEEECCCSSCEEEE--EEEETSTT-EEEEEETTSEEEEEET
T ss_pred eEEEEecCCCcEEEecccCCCCcEEEEEECCCCce--eeeeccCCCceeeEEe--eccCCCCc-eEEEecCCCcEEEEEC
Confidence 777777777543332 2333456666777777 55 445 4999999999999999
Q ss_pred CCCeeeeeee-c---cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEE------------EEEeCCCc
Q 011924 265 GKYQLSKHFR-F---PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLL------------IIVGDNPD 328 (475)
Q Consensus 265 ~~~~~~~~~~-~---~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l------------~~~~~dg~ 328 (475)
.++++++++. + ...+. +++|+|+|.++ ++|+.|++
T Consensus 211 ~TGk~l~tL~g~~~~v~~v~-----------------------------~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 211 KTGQLLKKMHIDDSYQASVC-----------------------------HKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp TTCCEEEEEECCC---CCCE-----------------------------EEEEEETTEEEEEEC------------CCEE
T ss_pred CCCcEEEEEcCCCcceeeeE-----------------------------EEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 9999999886 2 23444 67888888776 56778999
Q ss_pred EEEEECCCCceEEEe-----ecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceE-EEEEccCC
Q 011924 329 GLLVDSMTGKTIASL-----CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIR-SIRYTSDG 402 (475)
Q Consensus 329 i~iwd~~~~~~~~~l-----~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~-~l~~spdg 402 (475)
|++||..+++.+..+ .+|...+.+..+ ++.++|+++.|++|+|||+.+ ++++.++.+|...+. .++|+|||
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSS
T ss_pred EEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCC
Confidence 999999999988766 367766554444 488999999999999999987 889999998877655 68999999
Q ss_pred CEEEEEcCCCeEEEEEC
Q 011924 403 RYMATAEPADFVHVYDV 419 (475)
Q Consensus 403 ~~la~~~~dg~i~iwd~ 419 (475)
++|++|+.|++|+|||+
T Consensus 339 ~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 339 SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCCcEEEecC
Confidence 99999999999999995
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=2e-26 Score=227.54 Aligned_cols=256 Identities=13% Similarity=0.101 Sum_probs=193.5
Q ss_pred ceeEEec-CCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE---cCcEEEEEecC
Q 011924 134 RNLVWAT-SKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGFQ 208 (475)
Q Consensus 134 r~l~~~~-~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~~lvsg~~d 208 (475)
..+.|++ +...|++. .++.|.+|+..++.....+........... ....+...|.+++| ++.+|++|+.+
T Consensus 47 ~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 47 NTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRD-----HPDVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp EEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTT-----CTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred EEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccccccc-----ccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 4455777 66666664 578999999887665433321110000000 00124457999999 56799999999
Q ss_pred ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCC--eEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCC
Q 011924 209 GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGA--VHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSY 285 (475)
Q Consensus 209 g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~--~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~ 285 (475)
|.|++|++....... .. .+...+.++.+ +|.+. .++++++.++.|++||+.+++.+..+. +..++.
T Consensus 122 ~~i~iwd~~~~~~~~---~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~----- 190 (408)
T 4a11_B 122 KTLKVWDTNTLQTAD---VF-NFEETVYSHHM--SPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL----- 190 (408)
T ss_dssp SEEEEEETTTTEEEE---EE-ECSSCEEEEEE--CSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE-----
T ss_pred CeEEEeeCCCCccce---ec-cCCCceeeeEe--ecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE-----
Confidence 999999998755442 22 25667888888 66432 259999999999999999988888777 788898
Q ss_pred ceEEEEEEeecccceEEEEeeeeeeEEECCCCc-EEEEEeCCCcEEEEECCCCc-eEEEe---------------ecCCC
Q 011924 286 CIILLCRLLNFMTEKVIICLLCLQHSSQSPDGK-LLIIVGDNPDGLLVDSMTGK-TIASL---------------CGHLD 348 (475)
Q Consensus 286 ~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~dg~i~iwd~~~~~-~~~~l---------------~~h~~ 348 (475)
+++|+|+++ +|++++.+|.|++||++++. ++..+ .+|..
T Consensus 191 ------------------------~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (408)
T 4a11_B 191 ------------------------AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG 246 (408)
T ss_dssp ------------------------EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS
T ss_pred ------------------------EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC
Confidence 999999998 68999999999999998765 44444 56889
Q ss_pred CeEEEEEecCCCEEEEEeCCCeEEEEECCCC----------------------------------------------Cce
Q 011924 349 FSFASAWHPNGVTFATGNQDKTCRIWDLRNL----------------------------------------------SES 382 (475)
Q Consensus 349 ~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~----------------------------------------------~~~ 382 (475)
.|.+++|+|++++|++++.|+.|++||+++. +++
T Consensus 247 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 326 (408)
T 4a11_B 247 KVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ 326 (408)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE
T ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc
Confidence 9999999999999999999999999998752 245
Q ss_pred EEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEe
Q 011924 383 VAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI 429 (475)
Q Consensus 383 ~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~ 429 (475)
+..+.+|.+.|++++|+|+|++|++++.||.|++||+.+++.+....
T Consensus 327 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 327 ITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------
T ss_pred eeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 66777899999999999999999999999999999999987665443
No 115
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=3.2e-26 Score=228.48 Aligned_cols=253 Identities=15% Similarity=0.208 Sum_probs=196.2
Q ss_pred ceeEEecCCCeEEE-ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCceEE
Q 011924 134 RNLVWATSKHDVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELI 212 (475)
Q Consensus 134 r~l~~~~~~~~v~~-~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg~i~ 212 (475)
..+.|+++...|+. ..++.|.+|+..+++.... ..+ +...|.++++++.+|++|+.++.++
T Consensus 151 ~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~--~~~----------------h~~~v~~~s~~~~~l~sgs~d~~i~ 212 (420)
T 4gga_A 151 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN--MTS----------------HSARVGSLSWNSYILSSGSRSGHIH 212 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE--ECC----------------CSSCEEEEEEETTEEEEEETTSEEE
T ss_pred EEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE--EeC----------------CCCceEEEeeCCCEEEEEeCCCcee
Confidence 44558887777776 4578999999887755433 222 2346889999999999999999999
Q ss_pred EEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCee----eeee-eccccEEeccCCce
Q 011924 213 CKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL----SKHF-RFPWPVNVSSSYCI 287 (475)
Q Consensus 213 vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~----~~~~-~~~~~v~~s~~~~~ 287 (475)
+|+....... ...+..|...+..+.+ +|++.. +++++.|+.|++|++.+++. +... .+...|.
T Consensus 213 ~~d~~~~~~~--~~~~~~h~~~~~~~~~--~~~g~~-l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~------- 280 (420)
T 4gga_A 213 HHDVRVAEHH--VATLSGHSQEVCGLRW--APDGRH-LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK------- 280 (420)
T ss_dssp EEETTSSSCE--EEEEECCSSCEEEEEE--CTTSSE-EEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEE-------
T ss_pred Eeeeccccee--eEEecccccceeeeee--cCCCCe-eeeeeccccceEEeeccccccceeeeeecccCCcee-------
Confidence 9998766544 3566788999999999 999986 99999999999999977543 2222 3677788
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECCCC-cEEEEE--eCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEE
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSPDG-KLLIIV--GDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT 364 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g-~~l~~~--~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t 364 (475)
+++|+|.+ .+++++ +.|+.|++||+.+++++..+..| ..+.++.|+|+++.+++
T Consensus 281 ----------------------~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~ 337 (420)
T 4gga_A 281 ----------------------AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELIS 337 (420)
T ss_dssp ----------------------EEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEE
T ss_pred ----------------------eeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEE
Confidence 99999954 555554 47899999999999999888855 56889999999999988
Q ss_pred Ee--CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEE
Q 011924 365 GN--QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF 440 (475)
Q Consensus 365 ~s--~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~f 440 (475)
++ .|++|+|||+.+ ++++..+.+|.+.|++++|+|+|++||+|+.|++|+|||+....+......+...+....|
T Consensus 338 ~sg~~d~~I~iwd~~~-~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 338 GHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSL 414 (420)
T ss_dssp EECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC---------------
T ss_pred EEecCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcccccc
Confidence 76 689999999987 7899999999999999999999999999999999999999876555544444444433333
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=1.3e-25 Score=221.28 Aligned_cols=250 Identities=13% Similarity=0.142 Sum_probs=200.1
Q ss_pred cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEE-EEEecCceEEEEeCCCCCceEEE
Q 011924 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLL-VAGGFQGELICKHLDRPGVSFCS 225 (475)
Q Consensus 149 ~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~l-vsg~~dg~i~vw~~~~~~~~~~~ 225 (475)
.++.|.+|+..+++....+... ..+.++++ ++++| ++++.+|.|++|++.+.+..
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~-------------------~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~--- 67 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVG-------------------SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--- 67 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECS-------------------SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE---
T ss_pred CCCEEEEEECCCCeEEEEeecC-------------------CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE---
Confidence 4588999998877655443211 23678888 77766 67779999999999765543
Q ss_pred eeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEe
Q 011924 226 RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICL 305 (475)
Q Consensus 226 ~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~ 305 (475)
.....+ ..+.+++| +|+++.++++++.++.|++||+.+++.+..+.....+.
T Consensus 68 ~~~~~~-~~v~~~~~--spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~------------------------- 119 (391)
T 1l0q_A 68 ATVPAG-SSPQGVAV--SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPL------------------------- 119 (391)
T ss_dssp EEEECS-SSEEEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEE-------------------------
T ss_pred EEEECC-CCccceEE--CCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcc-------------------------
Confidence 222223 37889999 99999866777788999999999999988888777777
Q ss_pred eeeeeEEECCCCcEE-EEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEE-EEEeCCCeEEEEECCCCCceE
Q 011924 306 LCLQHSSQSPDGKLL-IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTF-ATGNQDKTCRIWDLRNLSESV 383 (475)
Q Consensus 306 ~~i~~~~~sp~g~~l-~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l-~t~s~dg~v~iwd~~~~~~~~ 383 (475)
+++|+|+|+.+ ++++.++.|++||+.+++.+..+..+ ..+.+++|+|+++++ ++++.+++|++||+++ ++.+
T Consensus 120 ----~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~ 193 (391)
T 1l0q_A 120 ----GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVI 193 (391)
T ss_dssp ----EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEE
T ss_pred ----eEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEE
Confidence 99999999977 67778999999999999998888865 457999999999887 5777899999999976 6666
Q ss_pred EEEecCCCceEEEEEccCCCEEEEEc---CCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEE-EecCCc
Q 011924 384 AVLKGNLGAIRSIRYTSDGRYMATAE---PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-VWDRTY 456 (475)
Q Consensus 384 ~~~~~~~~~v~~l~~spdg~~la~~~---~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~-~~D~~~ 456 (475)
..+.. ...+.+++|+|+|++|++++ .++.|++||+.+++.+..+..+ ..+.+++|+|+|++|+++ +.|+.+
T Consensus 194 ~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v 268 (391)
T 1l0q_A 194 DTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFXNTV 268 (391)
T ss_dssp EEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEec-CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC-CCccEEEEccCCCEEEEEcCCCCEE
Confidence 66654 55789999999999999887 6899999999999887777654 458999999999988654 445443
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=3.3e-26 Score=215.96 Aligned_cols=248 Identities=12% Similarity=-0.029 Sum_probs=174.1
Q ss_pred eEEEEEE----cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCC-------------------------ceeEEEEE
Q 011924 191 QVSTLAV----KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA-------------------------ITNAVEIY 241 (475)
Q Consensus 191 ~v~~l~~----~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~-------------------------~v~~l~~~ 241 (475)
.++++-| -....+.......|++|+......-.+..+...|.. .|++|++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~- 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC- 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE-
Confidence 4666766 123344445578999999887632222233333332 4566666
Q ss_pred eCCC----CCeEEEEEeCCCeEEEEECCCCeeeeeee--ccccEEeccCCceEEEEEEeeccc-ceEEEEee----eeee
Q 011924 242 GSPS----GAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPWPVNVSSSYCIILLCRLLNFMT-EKVIICLL----CLQH 310 (475)
Q Consensus 242 ~s~~----g~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~v~~s~~~~~l~~~~v~d~~~-~~~~~~~~----~i~~ 310 (475)
+|+ +.. +++++. .+++|++.+++.+.... +...|. +|++.. ++.+.... .++.
T Consensus 120 -spd~~~~~~~-l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~------------~~~~s~dG~~~~s~~~~~~~v~~ 183 (356)
T 2w18_A 120 -SSDDESEKQV-LLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVE------------VMTFAEDGGGKENQFLMPPEETI 183 (356)
T ss_dssp -------CCEE-EEEEEE--EEEEEEETTTEEEEEESSSTTCEEE------------EEEECTTSCEEEEEEECCCSSCE
T ss_pred -CCCccccccE-EEeCCC--eEEEEecCCCcEEEecccCCCCcEE------------EEEECCCCceeeeeccCCCceee
Confidence 888 765 666653 47889888888777643 454444 555522 44333211 4557
Q ss_pred EEECC---CCcEEEEEeCCCcEEEEECCCCceEEEeecCC---CCeEEEEEecCCCEE------------EEEeCCCeEE
Q 011924 311 SSQSP---DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL---DFSFASAWHPNGVTF------------ATGNQDKTCR 372 (475)
Q Consensus 311 ~~~sp---~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~---~~v~~~~~sp~g~~l------------~t~s~dg~v~ 372 (475)
++|+| ++.+|++++.|++|+|||+.+|++++++.+|. ..+.+++|+|+|.++ ++|+.|++|+
T Consensus 184 l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIk 263 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLI 263 (356)
T ss_dssp EEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEE
T ss_pred EEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEE
Confidence 88888 77999999999999999999999999998754 357778999999887 5688899999
Q ss_pred EEECCCCCceEEEE-----ecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeE-EEEEcCCCCe
Q 011924 373 IWDLRNLSESVAVL-----KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEIS-GISFSPDTES 446 (475)
Q Consensus 373 iwd~~~~~~~~~~~-----~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~-~l~fspdg~~ 446 (475)
+||..+ ++.+..+ .+|.+.+.+..+ ++.++|+++.|++|+|||+.+++++.++.+|...+. .++|||||++
T Consensus 264 lWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~ 340 (356)
T 2w18_A 264 VINPKT-TLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSH 340 (356)
T ss_dssp EEETTT-TEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSE
T ss_pred EEECCC-CEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCE
Confidence 999976 6766655 255555444444 488999999999999999999999999988877654 6899999999
Q ss_pred EEEEEecCCcce
Q 011924 447 LFIGVWDRTYGS 458 (475)
Q Consensus 447 l~~~~~D~~~~~ 458 (475)
|++|+.|++++.
T Consensus 341 LaSGS~D~TIkl 352 (356)
T 2w18_A 341 LLAGQKDGNIFV 352 (356)
T ss_dssp EEEECTTSCEEE
T ss_pred EEEEECCCcEEE
Confidence 999999999863
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=5e-26 Score=227.79 Aligned_cols=258 Identities=15% Similarity=0.161 Sum_probs=193.7
Q ss_pred ceeeeccc-ceeEEecC-CCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCc
Q 011924 126 STILHFQL-RNLVWATS-KHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDK 200 (475)
Q Consensus 126 ~~~~h~~l-r~l~~~~~-~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~ 200 (475)
..+.|... ..+.|.+. ...+++. .++.|.+|+..+...... ..+... + ...-..+...|++++| ++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~--~~~~~~-----~-~~~~~~h~~~v~~l~~~~~~~ 194 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE--PSGECQ-----P-DLRLRGHQKEGYGLSWNPNLN 194 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC--TTCCCC-----C-SEEEECCSSCCCCEEECTTST
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC--ccccCC-----C-cEEecCCCCCeEEEEeCCCCC
Confidence 34455543 44446665 3444443 468899999754211000 000000 0 0000123346889999 555
Q ss_pred -EEEEEecCceEEEEeCCCCCc---e-EEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC---eeeee
Q 011924 201 -LLVAGGFQGELICKHLDRPGV---S-FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY---QLSKH 272 (475)
Q Consensus 201 -~lvsg~~dg~i~vw~~~~~~~---~-~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~---~~~~~ 272 (475)
+|++|+.+|.|++|++..... . ........|...|.+++| +|++..+|++++.|+.|++||++++ +.+..
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~ 272 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAW--HLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT 272 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEE--CSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEE--eCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE
Confidence 999999999999999987332 1 112345678899999999 9965556999999999999999876 45555
Q ss_pred ee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCc-EEEEEeCCCcEEEEECCC-CceEEEeecCCCC
Q 011924 273 FR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGK-LLIIVGDNPDGLLVDSMT-GKTIASLCGHLDF 349 (475)
Q Consensus 273 ~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~dg~i~iwd~~~-~~~~~~l~~h~~~ 349 (475)
+. +...++ +++|+|++. ++++++.+|.|++||+++ ++++..+.+|...
T Consensus 273 ~~~~~~~v~-----------------------------~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~ 323 (430)
T 2xyi_A 273 VDAHTAEVN-----------------------------CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 323 (430)
T ss_dssp EECCSSCEE-----------------------------EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSC
T ss_pred eecCCCCeE-----------------------------EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCC
Confidence 54 778888 999999887 788999999999999997 5678899999999
Q ss_pred eEEEEEecCCC-EEEEEeCCCeEEEEECCCCC-------------ceEEEEecCCCceEEEEEccCCC-EEEEEcCCCeE
Q 011924 350 SFASAWHPNGV-TFATGNQDKTCRIWDLRNLS-------------ESVAVLKGNLGAIRSIRYTSDGR-YMATAEPADFV 414 (475)
Q Consensus 350 v~~~~~sp~g~-~l~t~s~dg~v~iwd~~~~~-------------~~~~~~~~~~~~v~~l~~spdg~-~la~~~~dg~i 414 (475)
|.+++|+|+++ +|++++.|++|+|||++..+ ..+..+.+|...|++++|+|+++ +|++++.||.|
T Consensus 324 v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 324 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIM 403 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred EEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCE
Confidence 99999999884 79999999999999997522 56777788999999999999999 99999999999
Q ss_pred EEEECCCC
Q 011924 415 HVYDVKSG 422 (475)
Q Consensus 415 ~iwd~~~~ 422 (475)
+||++...
T Consensus 404 ~iw~~~~~ 411 (430)
T 2xyi_A 404 QVWQMAEN 411 (430)
T ss_dssp EEEEECHH
T ss_pred EEeEcccc
Confidence 99998754
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1e-25 Score=225.82 Aligned_cols=218 Identities=14% Similarity=0.044 Sum_probs=173.5
Q ss_pred ceeEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCC-----ceeEEEEEeCCCCCeEEEEEeCCCeEEE
Q 011924 189 QTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA-----ITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (475)
Q Consensus 189 ~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~-----~v~~l~~~~s~~g~~~l~s~s~dg~v~i 261 (475)
...|.+++| +|.+|++++.+|.|++|+... +..... |.. .+.+++| ||+|+. |++|+.||+|++
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svaf--SPDG~~-LAsgs~DGtVkI 155 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEW--NPIESS-IVVGNEDGELQF 155 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEE--CSSSSC-EEEEETTSEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEE--cCCCCE-EEEEcCCCEEEE
Confidence 567999999 999999999999999999543 233444 444 4999999 999997 999999999999
Q ss_pred EECCCCee-------eeeee-----ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcE
Q 011924 262 FDMGKYQL-------SKHFR-----FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDG 329 (475)
Q Consensus 262 wd~~~~~~-------~~~~~-----~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i 329 (475)
|++.++.. +..+. |...|. +++|+|+| +++++.|+.+
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~-----------------------------sVawSPdg--Laass~D~tV 204 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVT-----------------------------HIVWYEDV--LVAALSNNSV 204 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEE-----------------------------EEEEETTE--EEEEETTCCE
T ss_pred EECCCCccccccceeeeeeecccccccccEE-----------------------------EEEEcCCc--EEEEeCCCeE
Confidence 99988752 44442 345677 99999999 7888899999
Q ss_pred EEEECCCCce---EEEe-ecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEE--ccCCC
Q 011924 330 LLVDSMTGKT---IASL-CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRY--TSDGR 403 (475)
Q Consensus 330 ~iwd~~~~~~---~~~l-~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~--spdg~ 403 (475)
++||+..++. .+++ .+|...|.+++|+ |+.||+++ +++|++||+.. ++......+|...|..++| +|++.
T Consensus 205 rlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~~ 280 (588)
T 2j04_A 205 FSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKN-YSISSLKTGSLENFHIIPLNHEKEST 280 (588)
T ss_dssp EEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTT-TEEEEEECSCCSCCCEEEETTCSSCE
T ss_pred EEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCC-CeEEEEEcCCCceEEEEEeeeCCCCC
Confidence 9999987773 4567 4788999999999 68999997 69999999975 4543444489999999999 99999
Q ss_pred EEEEEcCCCeEEEEECCCCe-----------------------eEEEEeccCCCeEEEEEcCCCCeEEEEEe
Q 011924 404 YMATAEPADFVHVYDVKSGY-----------------------EKEQEIDFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 404 ~la~~~~dg~i~iwd~~~~~-----------------------~~~~~~~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
.|+++..+|. ++|....-. .... ..+...|.+++|||||+.||+++.
T Consensus 281 ~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~-~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 281 ILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNN-YETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp EEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSS-SCCEEEEEEEEECTTSSEEEEEEE
T ss_pred EEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceee-eccceEEEEEEECCCCCEEEEEEe
Confidence 9999999999 999874210 0000 011224889999999999998864
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=7e-26 Score=220.28 Aligned_cols=264 Identities=11% Similarity=0.035 Sum_probs=199.2
Q ss_pred ceeEEecCC---CeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEec
Q 011924 134 RNLVWATSK---HDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF 207 (475)
Q Consensus 134 r~l~~~~~~---~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~ 207 (475)
..+.|.+.. ..|+.. .++.|.+|+..+........+.+ +...|.+++| ++++|++|+.
T Consensus 43 ~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 43 GCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM----------------HTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp EEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE----------------CSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc----------------ccCCEEEEEECcCCCEEEEEcC
Confidence 444466663 555554 56899999987633322122211 2347999999 8899999999
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccE-EeccCCc
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPV-NVSSSYC 286 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v-~~s~~~~ 286 (475)
+|.|++|++...... ....|...|.+++|..+|++.. |++++.|+.|++||+.+++.+..+.....+ .+.....
T Consensus 107 dg~v~iwd~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 181 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAI----QIAQHDAPVKTIHWIKAPNYSC-VMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP 181 (368)
T ss_dssp TSEEEEEETTTTEEE----EEEECSSCEEEEEEEECSSCEE-EEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT
T ss_pred CCcEEEEEcCCCCce----eeccccCceEEEEEEeCCCCCE-EEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC
Confidence 999999999875533 2456889999999977888875 999999999999999998888877743322 2222222
Q ss_pred eEE------EEEEeecccceEEEEee------eeeeEEECCCCcE----EEEEeCCCcEEEEECCCC---ceEEEeecCC
Q 011924 287 IIL------LCRLLNFMTEKVIICLL------CLQHSSQSPDGKL----LIIVGDNPDGLLVDSMTG---KTIASLCGHL 347 (475)
Q Consensus 287 ~l~------~~~v~d~~~~~~~~~~~------~i~~~~~sp~g~~----l~~~~~dg~i~iwd~~~~---~~~~~l~~h~ 347 (475)
.+. .+.+|+........... .+.++++.+++.. +++++.++.|++|+++.. ..+..+.+|.
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 261 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHR 261 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSE
T ss_pred eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeee
Confidence 222 57899987754433222 2345555544433 999999999999999987 5677888887
Q ss_pred C------------CeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEE
Q 011924 348 D------------FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVH 415 (475)
Q Consensus 348 ~------------~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~ 415 (475)
. .|.+++|+|++++|++++.||.|++||+++ ++++..+.+|..+|++++|+|+|++|++++.|+..+
T Consensus 262 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 262 SNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA-RTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSK 340 (368)
T ss_dssp EC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT-TEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTT
T ss_pred cccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC-CcEEEEecCCCCCceEEEECCCCCeEEEEecccccc
Confidence 6 799999999999999999999999999987 788999999999999999999999999999987554
Q ss_pred EEEC
Q 011924 416 VYDV 419 (475)
Q Consensus 416 iwd~ 419 (475)
.|++
T Consensus 341 ~~~~ 344 (368)
T 3mmy_A 341 GHEF 344 (368)
T ss_dssp CGGG
T ss_pred cccc
Confidence 4443
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=2.6e-24 Score=205.18 Aligned_cols=235 Identities=14% Similarity=0.184 Sum_probs=189.8
Q ss_pred ceeEEecCCCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCceEE
Q 011924 134 RNLVWATSKHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELI 212 (475)
Q Consensus 134 r~l~~~~~~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg~i~ 212 (475)
..+.|.+....++.. .++.|.+|+..+++....+ .+ +...+.++++.+.+|++|+.++.++
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~--~~----------------h~~~~~~~~~~~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM--TS----------------HSARVGSLSWNSYILSSGSRSGHIH 132 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--EC----------------CSSCEEEEEEETTEEEEEETTSEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe--cC----------------ccceEEEeecCCCEEEEEecCCceE
Confidence 445577777777664 5799999998877654432 22 2235778888999999999999999
Q ss_pred EEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeee-----eeeccccEEeccCCce
Q 011924 213 CKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSK-----HFRFPWPVNVSSSYCI 287 (475)
Q Consensus 213 vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~-----~~~~~~~v~~s~~~~~ 287 (475)
+|+....... ......|...+..+.+ +++++. +++++.|++|++||+.+++... ...+...+.
T Consensus 133 ~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~------- 200 (318)
T 4ggc_A 133 HHDVRVAEHH--VATLSGHSQEVCGLRW--APDGRH-LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK------- 200 (318)
T ss_dssp EEETTSSSCE--EEEEECCSSCEEEEEE--CTTSSE-EEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEE-------
T ss_pred eeecCCCcee--EEEEcCccCceEEEEE--cCCCCE-EEEEecCcceeEEECCCCcccccceeeecccCCceE-------
Confidence 9998766544 3566788889999999 999986 8999999999999998765322 222556677
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECCCCcEE---EEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEE
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLL---IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT 364 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l---~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t 364 (475)
+++++|.+..+ ++++.++.|++||.+.+....... +...+..++|+|+++.+++
T Consensus 201 ----------------------~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 201 ----------------------AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp ----------------------EEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEE
T ss_pred ----------------------EEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEE
Confidence 88999965433 345678999999999888776655 6778999999999998887
Q ss_pred Ee--CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q 011924 365 GN--QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422 (475)
Q Consensus 365 ~s--~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~ 422 (475)
++ .|++|+|||+++ ++++..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+.
T Consensus 258 ~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 65 799999999987 8899999999999999999999999999999999999998764
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=3.5e-23 Score=203.79 Aligned_cols=249 Identities=15% Similarity=0.089 Sum_probs=198.8
Q ss_pred eecccceeEEecCCCeEEEe--cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEE-
Q 011924 129 LHFQLRNLVWATSKHDVYLM--SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLV- 203 (475)
Q Consensus 129 ~h~~lr~l~~~~~~~~v~~~--~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lv- 203 (475)
.|...+.+.|+++...|++. .++.|.+|+..+++....+... ..+.++++ ++++|+
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-------------------~~v~~~~~spdg~~l~~ 90 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-------------------SSPQGVAVSPDGKQVYV 90 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-------------------SSEEEEEECTTSSEEEE
T ss_pred cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-------------------CCccceEECCCCCEEEE
Confidence 34455667788888877665 5789999998887665544321 15788888 677775
Q ss_pred EEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEecc
Q 011924 204 AGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVSS 283 (475)
Q Consensus 204 sg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~s~ 283 (475)
+++.++.|++|++...... .... +...+.+++| +|+|+.++++++.++.|++||+.+++.+..+.....+.
T Consensus 91 ~~~~~~~v~v~d~~~~~~~---~~~~-~~~~~~~~~~--s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--- 161 (391)
T 1l0q_A 91 TNMASSTLSVIDTTSNTVA---GTVK-TGKSPLGLAL--SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPK--- 161 (391)
T ss_dssp EETTTTEEEEEETTTTEEE---EEEE-CSSSEEEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEE---
T ss_pred EECCCCEEEEEECCCCeEE---EEEe-CCCCcceEEE--CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcc---
Confidence 5556799999999876543 2222 3345788888 99999866888899999999999999888887666677
Q ss_pred CCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEE-EEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEE
Q 011924 284 SYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLL-IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTF 362 (475)
Q Consensus 284 ~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l-~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l 362 (475)
+++|+|+++.+ ++++.++.|++||+++++.+..+. +...+.+++|+|++++|
T Consensus 162 --------------------------~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l 214 (391)
T 1l0q_A 162 --------------------------GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKA 214 (391)
T ss_dssp --------------------------EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEE
T ss_pred --------------------------eEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEE
Confidence 99999999887 566788999999999998887776 56688999999999999
Q ss_pred EEEe---CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEE-EEEcCCCeEEEEECCCCeeEEEEeccCCC
Q 011924 363 ATGN---QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYM-ATAEPADFVHVYDVKSGYEKEQEIDFFGE 434 (475)
Q Consensus 363 ~t~s---~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~l-a~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 434 (475)
++++ .++.|++||+++ ++.+..+..+. .+.+++|+|+|++| ++++.++.|++||+.+++.+..+..+..+
T Consensus 215 ~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 215 YVTNVDKYFNTVSMIDTGT-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNP 288 (391)
T ss_dssp EEEEECSSCCEEEEEETTT-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred EEEecCcCCCcEEEEECCC-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCC
Confidence 9888 689999999976 67777887765 57899999999977 56688999999999999888877765543
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.4e-24 Score=211.58 Aligned_cols=219 Identities=9% Similarity=0.023 Sum_probs=171.6
Q ss_pred eecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee--ccccEEeccCCceEE-------EEEEeecc
Q 011924 227 TTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPWPVNVSSSYCIIL-------LCRLLNFM 297 (475)
Q Consensus 227 ~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~v~~s~~~~~l~-------~~~v~d~~ 297 (475)
....|...|++++| +|+|+. |++|+.+ .+++|++.+++...... ....+.+.+....++ .+++||..
T Consensus 14 ~~~~h~~~V~~v~f--s~dg~~-la~g~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~ 89 (355)
T 3vu4_A 14 PENHVSNPVTDYEF--NQDQSC-LILSTLK-SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV 89 (355)
T ss_dssp -----CCCCCEEEE--CTTSSE-EEEECSS-EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETT
T ss_pred ccccCCCceEEEEE--CCCCCE-EEEEcCC-EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECC
Confidence 44678899999999 999985 7777655 58999998877665544 233455666555553 78999999
Q ss_pred cceEEEEee---eeeeEEECCCCcEEEEEeCCCcEEEEECCCC-ceEEEeecCCCCeEEEEEecCCCEEEE--EeCCCeE
Q 011924 298 TEKVIICLL---CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTG-KTIASLCGHLDFSFASAWHPNGVTFAT--GNQDKTC 371 (475)
Q Consensus 298 ~~~~~~~~~---~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~-~~~~~l~~h~~~v~~~~~sp~g~~l~t--~s~dg~v 371 (475)
+++.+.... .|.+++++++. ++++ .++.|++||+.++ +.+..+.. +...++++| .++++ |+.+|+|
T Consensus 90 ~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v 161 (355)
T 3vu4_A 90 KKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQI 161 (355)
T ss_dssp TTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCE
T ss_pred CCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEE
Confidence 988776554 67889998864 3433 4778999999988 66666654 455667777 56666 5789999
Q ss_pred EEEECCCCC--------------ce-EEEEecCCCceEEEEEccCCCEEEEEcCCCe-EEEEECCCCeeEEEEe-c-cCC
Q 011924 372 RIWDLRNLS--------------ES-VAVLKGNLGAIRSIRYTSDGRYMATAEPADF-VHVYDVKSGYEKEQEI-D-FFG 433 (475)
Q Consensus 372 ~iwd~~~~~--------------~~-~~~~~~~~~~v~~l~~spdg~~la~~~~dg~-i~iwd~~~~~~~~~~~-~-~~~ 433 (475)
++||++... .+ +..+.+|.+.|++++|+|+|++||+|+.|++ |+|||++++..+..+. + |.+
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~ 241 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA 241 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC
Confidence 999997632 12 7889999999999999999999999999998 9999999999998888 5 899
Q ss_pred CeEEEEEcCCCCeEEEEEecCCcc
Q 011924 434 EISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 434 ~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
.|.+++|+|+|++|++++.|+++.
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~v~ 265 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWTLH 265 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCEEE
T ss_pred cEEEEEECCCCCEEEEEECCCEEE
Confidence 999999999999999999998764
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=3.2e-25 Score=219.24 Aligned_cols=244 Identities=12% Similarity=0.058 Sum_probs=156.6
Q ss_pred ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE----------cCcEEEEEecCceEEEEeCC
Q 011924 148 MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV----------KDKLLVAGGFQGELICKHLD 217 (475)
Q Consensus 148 ~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~----------~~~~lvsg~~dg~i~vw~~~ 217 (475)
..++.|++|+..++.......+. . + .-|...|.+++| ++++|++|+.|++|++||+.
T Consensus 108 ~~d~~v~lw~~~~~~~~~~~~~~----~--------~-~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 108 CQDNTVRLIITKNETIITQHVLG----G--------K-SGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp ETTSCEEEEEEETTEEEEEEEEC----T--------T-TSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eCCCcEEEEECCCCccceeeeec----c--------c-CCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 35789999998776553321111 0 0 113347888888 57899999999999999997
Q ss_pred CCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc------ccEEeccCCceEEEE
Q 011924 218 RPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP------WPVNVSSSYCIILLC 291 (475)
Q Consensus 218 ~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~------~~v~~s~~~~~l~~~ 291 (475)
..+.. .....|...+.+++| +|++..+|++++.|++|++||+.+++........ ..+.+......
T Consensus 175 ~~~~~---~~~~~~~~~v~~v~~--~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~---- 245 (393)
T 4gq1_A 175 DEGPI---LAGYPLSSPGISVQF--RPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV---- 245 (393)
T ss_dssp TTEEE---EEEEECSSCEEEEEE--ETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC----
T ss_pred CCcee---eeecCCCCCcEEEEE--CCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce----
Confidence 65543 344567788999999 9998777999999999999999887655433211 11110000000
Q ss_pred EEeecccceEEEEeeeeeeEEEC-CCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEE-----------------
Q 011924 292 RLLNFMTEKVIICLLCLQHSSQS-PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFAS----------------- 353 (475)
Q Consensus 292 ~v~d~~~~~~~~~~~~i~~~~~s-p~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~----------------- 353 (475)
...........+.++.|+ |+|+.+++++.|+.+++||+.+++....+..|...+..+
T Consensus 246 -----~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T 4gq1_A 246 -----NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLG 320 (393)
T ss_dssp -----------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSC
T ss_pred -----eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCccee
Confidence 000000111234477876 799999999999999999999887766666555444333
Q ss_pred -EEec--CCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECC
Q 011924 354 -AWHP--NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420 (475)
Q Consensus 354 -~~sp--~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~ 420 (475)
.|+| ++.++++|+.||+|+|||+.. +.++..+..|..+|++++|+|||++||+++.+| +.+|.+.
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~-~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYE-KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTC-TTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCC-CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 3444 445677888999999999977 667777778888999999999999999998766 7777653
No 125
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4e-25 Score=236.65 Aligned_cols=200 Identities=15% Similarity=0.207 Sum_probs=174.3
Q ss_pred eeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC--CCeeeeeee-ccccEEeccCCceEEEEEEeecccceEE
Q 011924 226 RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG--KYQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVI 302 (475)
Q Consensus 226 ~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~--~~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~ 302 (475)
.++.+|.+.|++++| +|+|+. +++|+.||+|++|++. +++....+. |..+|.
T Consensus 3 ~~l~gH~~~V~~l~~--s~dg~~-latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~---------------------- 57 (753)
T 3jro_A 3 VIANAHNELIHDAVL--DYYGKR-LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW---------------------- 57 (753)
T ss_dssp -----CCCCEEEECC--CSSSCC-EEEEETTTEEEEEEEETTEEEEEEEECCCSSCEE----------------------
T ss_pred eecccCcceeEEEEE--CCCCCe-EEEEECCCcEEEEecCCCCCccceeccCCcCceE----------------------
Confidence 456789999999999 999986 9999999999999997 455666665 788899
Q ss_pred EEeeeeeeEEECCC--CcEEEEEeCCCcEEEEECCCCc--eEEEeecCCCCeEEEEEecC--CCEEEEEeCCCeEEEEEC
Q 011924 303 ICLLCLQHSSQSPD--GKLLIIVGDNPDGLLVDSMTGK--TIASLCGHLDFSFASAWHPN--GVTFATGNQDKTCRIWDL 376 (475)
Q Consensus 303 ~~~~~i~~~~~sp~--g~~l~~~~~dg~i~iwd~~~~~--~~~~l~~h~~~v~~~~~sp~--g~~l~t~s~dg~v~iwd~ 376 (475)
+++|+|+ +++|++++.||.|++||+.+++ .+..+.+|...|.+++|+|+ ++++++|+.||+|++||+
T Consensus 58 -------~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl 130 (753)
T 3jro_A 58 -------RVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 130 (753)
T ss_dssp -------EEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred -------EEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence 9999997 9999999999999999999887 77788899999999999998 999999999999999999
Q ss_pred CCCC-ceEEEEecCCCceEEEEEcc-------------CCCEEEEEcCCCeEEEEECCCC----eeEEEEeccCCCeEEE
Q 011924 377 RNLS-ESVAVLKGNLGAIRSIRYTS-------------DGRYMATAEPADFVHVYDVKSG----YEKEQEIDFFGEISGI 438 (475)
Q Consensus 377 ~~~~-~~~~~~~~~~~~v~~l~~sp-------------dg~~la~~~~dg~i~iwd~~~~----~~~~~~~~~~~~i~~l 438 (475)
+... .....+.+|...|.+++|+| ++++|++|+.||.|++||++++ .....+..|.+.|.++
T Consensus 131 ~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l 210 (753)
T 3jro_A 131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (753)
T ss_dssp CSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred ecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEE
Confidence 8642 34566778999999999999 5899999999999999999877 4556677899999999
Q ss_pred EEcCC---CCeEEEEEecCCcc
Q 011924 439 SFSPD---TESLFIGVWDRTYG 457 (475)
Q Consensus 439 ~fspd---g~~l~~~~~D~~~~ 457 (475)
+|+|+ +++|++|+.|+.+.
T Consensus 211 ~~sp~~~~~~~l~s~s~Dg~I~ 232 (753)
T 3jro_A 211 AWSPTVLLRSYLASVSQDRTCI 232 (753)
T ss_dssp EECCCCSSSEEEEEEESSSCEE
T ss_pred EeccCCCCCCEEEEEecCCEEE
Confidence 99999 99999999998774
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=2.7e-23 Score=207.48 Aligned_cols=226 Identities=12% Similarity=0.109 Sum_probs=185.1
Q ss_pred EEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEe--eecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSR--TTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~--~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
+.++++ ++.++++++.++.|++|++.......... ....|...+.+++| +|++.. +++++.|+.|++||+.++
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~-~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISI--PEHNEL-WVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEE--GGGTEE-EEEEGGGTEEEEEETTTC
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEE--cCCCEE-EEEECCCCEEEEEECCCc
Confidence 346666 56778888889999999998765442111 23478889999999 998875 899999999999999998
Q ss_pred eeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe-CCCcEEEEECCCCceEEEeec
Q 011924 268 QLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKTIASLCG 345 (475)
Q Consensus 268 ~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~l~~ 345 (475)
+.+..+. +...+. +++|+|+++.+++++ .++.|++||+++++.+..+..
T Consensus 202 ~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 252 (433)
T 3bws_A 202 AYKATVDLTGKWSK-----------------------------ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK 252 (433)
T ss_dssp CEEEEEECSSSSEE-----------------------------EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC
T ss_pred eEEEEEcCCCCCee-----------------------------EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC
Confidence 8888776 566788 999999999886555 789999999999998888875
Q ss_pred CCCCeEEEEEecCCCEEEEEe--------CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEE-EEEcCCCeEEE
Q 011924 346 HLDFSFASAWHPNGVTFATGN--------QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYM-ATAEPADFVHV 416 (475)
Q Consensus 346 h~~~v~~~~~sp~g~~l~t~s--------~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~l-a~~~~dg~i~i 416 (475)
+ ..+.+++|+|+++++++++ .|+.|++||+++ ++.+..+ .+...+.+++|+|+|+.| ++++.++.|++
T Consensus 253 ~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v 329 (433)
T 3bws_A 253 I-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEV 329 (433)
T ss_dssp C-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEE
T ss_pred C-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 4 4599999999999999988 588999999976 5555554 345578899999999755 56688999999
Q ss_pred EECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEec
Q 011924 417 YDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 417 wd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D 453 (475)
||+.+++....+. +...+.+++|+|+|++|++++.+
T Consensus 330 ~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 330 YDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp EETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECC
T ss_pred EECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecC
Confidence 9999988776654 67889999999999999998864
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=2.9e-23 Score=206.63 Aligned_cols=223 Identities=13% Similarity=0.096 Sum_probs=174.1
Q ss_pred CcEEEEEecC------ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCC---eEEEEECCCCee
Q 011924 199 DKLLVAGGFQ------GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC---GVRDFDMGKYQL 269 (475)
Q Consensus 199 ~~~lvsg~~d------g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg---~v~iwd~~~~~~ 269 (475)
+..++.++.+ +.|++|++..... ..+..|...+.+++| +|+|+. |++++.++ .|++||+.+++.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~----~~l~~~~~~v~~~~~--Spdg~~-la~~s~~~~~~~i~~~d~~tg~~ 215 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ----FVVHRSPQPLMSPAW--SPDGSK-LAYVTFESGRSALVIQTLANGAV 215 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSC----EEEEEESSCEEEEEE--CTTSSE-EEEEECTTSSCEEEEEETTTCCE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCC----EEEeCCCCcceeeEE--cCCCCE-EEEEEecCCCcEEEEEECCCCcE
Confidence 5566665554 7999999974332 334456778999999 999997 77777775 999999999887
Q ss_pred eeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEE-EEeCCC--cEEEEECCCCceEEEeecC
Q 011924 270 SKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLI-IVGDNP--DGLLVDSMTGKTIASLCGH 346 (475)
Q Consensus 270 ~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~-~~~~dg--~i~iwd~~~~~~~~~l~~h 346 (475)
.....+...+. +++|+|+|+.|+ +++.++ .|++||+.+++. ..+..|
T Consensus 216 ~~l~~~~~~~~-----------------------------~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~ 265 (415)
T 2hqs_A 216 RQVASFPRHNG-----------------------------APAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG 265 (415)
T ss_dssp EEEECCSSCEE-----------------------------EEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC
T ss_pred EEeecCCCccc-----------------------------CEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC
Confidence 65555777788 999999999888 555554 499999988875 577788
Q ss_pred CCCeEEEEEecCCCEEEEEeC-CC--eEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCC---CeEEEEECC
Q 011924 347 LDFSFASAWHPNGVTFATGNQ-DK--TCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA---DFVHVYDVK 420 (475)
Q Consensus 347 ~~~v~~~~~sp~g~~l~t~s~-dg--~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~d---g~i~iwd~~ 420 (475)
...+.+++|+|+|++|++++. ++ .|.+||+.. ++ ...+..+...+.+++|+|+|++|++++.+ ..|++||+.
T Consensus 266 ~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred CCcccceEECCCCCEEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 899999999999999998886 45 677788865 33 44556666788999999999999988764 589999999
Q ss_pred CCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcceEEEE
Q 011924 421 SGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEY 462 (475)
Q Consensus 421 ~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~~ll~~ 462 (475)
++... .+..+. .+.+++|+|+|++|++++.|+....+..+
T Consensus 344 ~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~ 383 (415)
T 2hqs_A 344 TGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLV 383 (415)
T ss_dssp TCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred CCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEE
Confidence 88653 444443 89999999999999999988754444444
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=6.4e-22 Score=203.34 Aligned_cols=278 Identities=13% Similarity=0.098 Sum_probs=209.7
Q ss_pred cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEEEeC--CCCCceEE
Q 011924 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHL--DRPGVSFC 224 (475)
Q Consensus 149 ~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~--~~~~~~~~ 224 (475)
.++.|.+|+..+++....+... + .+.++++ ++++|++++.++.|.+||+ .+....
T Consensus 157 ~d~~V~v~D~~t~~~~~~i~~g-----------------~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~-- 215 (543)
T 1nir_A 157 DAGQIALVDGDSKKIVKVIDTG-----------------Y--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV-- 215 (543)
T ss_dssp GGTEEEEEETTTCCEEEEEECS-----------------T--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE--
T ss_pred CCCeEEEEECCCceEEEEEecC-----------------c--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE--
Confidence 3588999999888765554321 1 1456666 8999999999999999999 443322
Q ss_pred EeeecCCCCceeEEEEEeCC----CCCeEEEEEeCCCeEEEEECCCCeeeeeeec---------------cccEEeccCC
Q 011924 225 SRTTYDDNAITNAVEIYGSP----SGAVHFTASNNDCGVRDFDMGKYQLSKHFRF---------------PWPVNVSSSY 285 (475)
Q Consensus 225 ~~~~~~~~~~v~~l~~~~s~----~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~---------------~~~v~~s~~~ 285 (475)
..+. +......++| +| +|++++++...+++|.+||..+++++..+.. ...+.+++++
T Consensus 216 -~~i~-~g~~p~~va~--sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~ 291 (543)
T 1nir_A 216 -AEIK-IGIEARSVES--SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 291 (543)
T ss_dssp -EEEE-CCSEEEEEEE--CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred -EEEe-cCCCcceEEe--CCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC
Confidence 2333 3445688888 99 9998555555689999999999988877652 1245678877
Q ss_pred ceEE-------EEEEeecccceEE-----EEeeeeeeEEECCCCcEEEEEe-CCCcEEEEECCCCceEEEeec----CCC
Q 011924 286 CIIL-------LCRLLNFMTEKVI-----ICLLCLQHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKTIASLCG----HLD 348 (475)
Q Consensus 286 ~~l~-------~~~v~d~~~~~~~-----~~~~~i~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~l~~----h~~ 348 (475)
..+. .+.+||..+.+.+ .....+.+++|+|+|++|++++ .++.|.+||+.+++++..+.. |.+
T Consensus 292 ~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 292 PEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp SEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCT
T ss_pred CEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCC
Confidence 6653 5788888764422 2223566899999999877665 588999999999999988874 655
Q ss_pred CeEEEEEecC-CCEEEEEe-CCCeEEEEECCCC------CceEEEEecCCCceEEEEEccCCCEEEEEcC-------CCe
Q 011924 349 FSFASAWHPN-GVTFATGN-QDKTCRIWDLRNL------SESVAVLKGNLGAIRSIRYTSDGRYMATAEP-------ADF 413 (475)
Q Consensus 349 ~v~~~~~sp~-g~~l~t~s-~dg~v~iwd~~~~------~~~~~~~~~~~~~v~~l~~spdg~~la~~~~-------dg~ 413 (475)
....+ ++|+ +.++++++ .|++|.|||+... .+.++++.++.+.+..++|+|+|++|++++. +++
T Consensus 372 ~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~ 450 (543)
T 1nir_A 372 RGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS 450 (543)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTC
T ss_pred CCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCce
Confidence 44443 5786 66777775 5899999999652 5789999998888889999999999999872 679
Q ss_pred EEEEECCCCeeEEEEe---------ccCCCeEEEEEcCCCCeEEEEEe
Q 011924 414 VHVYDVKSGYEKEQEI---------DFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 414 i~iwd~~~~~~~~~~~---------~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
|.|||+.+++...... .+...+..+.|+|+|+.|+++.|
T Consensus 451 v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 451 VAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVW 498 (543)
T ss_dssp EEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEE
T ss_pred EEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEee
Confidence 9999999988763332 34578999999999999999877
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=8.5e-23 Score=191.91 Aligned_cols=250 Identities=15% Similarity=0.089 Sum_probs=188.6
Q ss_pred CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEEEeCCC-CCceEEEe
Q 011924 150 HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDR-PGVSFCSR 226 (475)
Q Consensus 150 ~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~-~~~~~~~~ 226 (475)
+..|.+|+..+++...+... ...|.+++| ++++|++++ ++.|++|++.. .... .
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~-------------------~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~---~ 77 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT-------------------PELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE---K 77 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE-------------------SSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE---E
T ss_pred ceeEEEEeCCCCceeeeccC-------------------CcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce---E
Confidence 47789999887766554332 235778888 889998876 88999999987 5443 3
Q ss_pred eecCC-CCceeEEEEEeCCCCCeEEEEEe--CCCeEEE--EECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceE
Q 011924 227 TTYDD-NAITNAVEIYGSPSGAVHFTASN--NDCGVRD--FDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKV 301 (475)
Q Consensus 227 ~~~~~-~~~v~~l~~~~s~~g~~~l~s~s--~dg~v~i--wd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~ 301 (475)
....+ ...+.+++| +|+|+. +++++ .++.++| |++.+++ ...+.....+.
T Consensus 78 ~~~~~~~~~~~~~~~--spdg~~-l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~--------------------- 132 (297)
T 2ojh_A 78 VDTGFATICNNDHGI--SPDGAL-YAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSY--------------------- 132 (297)
T ss_dssp CCCTTCCCBCSCCEE--CTTSSE-EEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEE---------------------
T ss_pred eccccccccccceEE--CCCCCE-EEEEEeCCCCcceEEEEECCCCc-eEEeecCCCcc---------------------
Confidence 33333 467888999 999997 66666 3344444 4555544 33344444466
Q ss_pred EEEeeeeeeEEECCCCcEEE-EEeCCCcEEEEECC-CCceEEEeecCCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCC
Q 011924 302 IICLLCLQHSSQSPDGKLLI-IVGDNPDGLLVDSM-TGKTIASLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRN 378 (475)
Q Consensus 302 ~~~~~~i~~~~~sp~g~~l~-~~~~dg~i~iwd~~-~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~ 378 (475)
+++|+|+|+.|+ +++.++.+.||++. .+.....+..+...+.+++|+|++++|++++ .++.++||++..
T Consensus 133 --------~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 133 --------WHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp --------EEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred --------ceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECC
Confidence 889999999887 67788988999853 2334566777888999999999999888776 589999999874
Q ss_pred CCceEEEEecCCCceEEEEEccCCCEEEEEcCC-----------CeEEEEECCCCeeE--EEEeccCCCeEEEEEcCCCC
Q 011924 379 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA-----------DFVHVYDVKSGYEK--EQEIDFFGEISGISFSPDTE 445 (475)
Q Consensus 379 ~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~d-----------g~i~iwd~~~~~~~--~~~~~~~~~i~~l~fspdg~ 445 (475)
....+..+..+...+..++|+|+|++|++++.+ +.|.+||+.++... .....|.+.+..++|+|+|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 284 (297)
T 2ojh_A 205 DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGD 284 (297)
T ss_dssp TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSS
T ss_pred CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCC
Confidence 466677888888889999999999999988765 56999999887653 33446788999999999999
Q ss_pred eEEEEEecCC
Q 011924 446 SLFIGVWDRT 455 (475)
Q Consensus 446 ~l~~~~~D~~ 455 (475)
+|++++.|..
T Consensus 285 ~l~~~~~~~~ 294 (297)
T 2ojh_A 285 EFAYVRYFPV 294 (297)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEeccC
Confidence 9999988754
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=3.7e-22 Score=198.69 Aligned_cols=236 Identities=13% Similarity=0.064 Sum_probs=184.8
Q ss_pred CeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc---eEEEEeCCCCCceEEE
Q 011924 151 FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG---ELICKHLDRPGVSFCS 225 (475)
Q Consensus 151 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg---~i~vw~~~~~~~~~~~ 225 (475)
..|++|+...+....+... ...|.+++| +|+.|++++.++ .|++|++.+....
T Consensus 159 ~~i~i~d~~g~~~~~l~~~-------------------~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~--- 216 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS-------------------PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--- 216 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE-------------------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---
T ss_pred ceEEEEcCCCCCCEEEeCC-------------------CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---
Confidence 6889999765443333221 235888888 899999999875 9999999865533
Q ss_pred eeecCCCCceeEEEEEeCCCCCeEEEEEeCCCe--EEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEE
Q 011924 226 RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCG--VRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVII 303 (475)
Q Consensus 226 ~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~--v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~ 303 (475)
....+...+.+++| +|+|+.++++++.++. |++||+.+++......+...+.
T Consensus 217 -~l~~~~~~~~~~~~--spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~----------------------- 270 (415)
T 2hqs_A 217 -QVASFPRHNGAPAF--SPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNT----------------------- 270 (415)
T ss_dssp -EEECCSSCEEEEEE--CTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEE-----------------------
T ss_pred -EeecCCCcccCEEE--cCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCccc-----------------------
Confidence 23456678899999 9999986667776654 9999999887755445667777
Q ss_pred EeeeeeeEEECCCCcEEEEEeC-CC--cEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCC---CeEEEEECC
Q 011924 304 CLLCLQHSSQSPDGKLLIIVGD-NP--DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD---KTCRIWDLR 377 (475)
Q Consensus 304 ~~~~i~~~~~sp~g~~l~~~~~-dg--~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~d---g~v~iwd~~ 377 (475)
+++|+|+|+.|++++. ++ .|++||+.+++. ..+..+...+.+++|+|+|++|++++.+ ..|.+||+.
T Consensus 271 ------~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 271 ------EPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp ------EEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred ------ceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 9999999999998876 44 688889987764 4566677889999999999999988864 589999997
Q ss_pred CCCceEEEEecCCCceEEEEEccCCCEEEEEcCCC---eEEEEECCCCeeEEEEeccCCCeEEEEEcCCCC
Q 011924 378 NLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD---FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE 445 (475)
Q Consensus 378 ~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg---~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~ 445 (475)
+ ++. ..+..+. .+.+++|+|+|++|++++.++ .|++||+. +.....+..|.+.|.+++|+|.-.
T Consensus 344 ~-~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 344 T-GGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp T-CCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred C-CCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 6 444 4555554 789999999999999988776 79999987 556777888999999999999754
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=2.2e-21 Score=187.80 Aligned_cols=269 Identities=10% Similarity=0.066 Sum_probs=202.8
Q ss_pred cceeEEecCCCeEEEec--------CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcE-
Q 011924 133 LRNLVWATSKHDVYLMS--------HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKL- 201 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~--------~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~- 201 (475)
...+.++++...+|+.. ++.|..|+..+++....+...+ .+..+++ ++++
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l 103 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-------------------KPFGATINNTTQTL 103 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-------------------CCCSEEEETTTTEE
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-------------------CcceEEECCCCCEE
Confidence 45667888888888876 5689999998887666554321 1223444 7774
Q ss_pred EEEEecCceEEEEeCCCCCceEEEeeecCCC------CceeEEEEEeCCCCCeEEEEE-eCCCeEEEEECCCCeeeeeee
Q 011924 202 LVAGGFQGELICKHLDRPGVSFCSRTTYDDN------AITNAVEIYGSPSGAVHFTAS-NNDCGVRDFDMGKYQLSKHFR 274 (475)
Q Consensus 202 lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~------~~v~~l~~~~s~~g~~~l~s~-s~dg~v~iwd~~~~~~~~~~~ 274 (475)
++++..++.|.+|++.+.+............ ..+..+.+ +|+|+.+++++ +.++.|.+||+.+++.+..+.
T Consensus 104 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 104 WFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA--DDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE--ETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred EEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE--CCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 4555668999999998766543222211110 12577888 99999755555 358899999999999888877
Q ss_pred -ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeec----CCCC
Q 011924 275 -FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCG----HLDF 349 (475)
Q Consensus 275 -~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~----h~~~ 349 (475)
....+. +++|+|+|+.+++++.++.|.+||+.+++.+..+.. +...
T Consensus 182 ~~~~~~~-----------------------------~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 3vgz_A 182 NTGKMST-----------------------------GLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHF 232 (353)
T ss_dssp CCCTTCC-----------------------------CCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCC
T ss_pred CCCCccc-----------------------------eEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcc
Confidence 444466 889999999999999999999999999998887764 5567
Q ss_pred eEEEEEecCCCEEEEEeC-CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEEECCCCeeEEE
Q 011924 350 SFASAWHPNGVTFATGNQ-DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQ 427 (475)
Q Consensus 350 v~~~~~sp~g~~l~t~s~-dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~~~~~~~~~ 427 (475)
+.+++|+|+++++++++. ++.|.+||+.+ ++.+..+.... ...++|+|+|++|+++. .++.|.+||+.+++.+..
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKAAEVLVVDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp EEEEEEETTTTEEEEEESSSSEEEEEETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence 888999999998777765 48999999976 67677766543 25799999999666555 689999999999987766
Q ss_pred EeccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 428 EIDFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 428 ~~~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
+.. ...+.+++|+|+|++|+++..++.
T Consensus 310 ~~~-~~~~~~~~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 310 FDT-PTHPNSLALSADGKTLYVSVKQKS 336 (353)
T ss_dssp EEC-CSEEEEEEECTTSCEEEEEEECCC
T ss_pred Eec-CCCCCeEEEcCCCCEEEEEEcccc
Confidence 654 457899999999999998877643
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=1.4e-20 Score=180.87 Aligned_cols=266 Identities=13% Similarity=0.092 Sum_probs=186.3
Q ss_pred eEEecCCCeEEEe--cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEec-Cce
Q 011924 136 LVWATSKHDVYLM--SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF-QGE 210 (475)
Q Consensus 136 l~~~~~~~~v~~~--~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~-dg~ 210 (475)
+++......+|.+ .++.|.+|+..+++....+... ...+ ++++ ++++|++++. ++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~------------------~~~~-~~~~s~dg~~l~~~~~~~~~ 63 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG------------------YDFV-DTAITSDCSNVVVTSDFCQT 63 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC------------------CCEE-EEEECSSSCEEEEEESTTCE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc------------------CCcc-eEEEcCCCCEEEEEeCCCCe
Confidence 4455566666664 4588999999888775554321 1133 6666 7876665554 899
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC-C--eEEEEECCCCeeeeeeeccccEEeccCCce
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-C--GVRDFDMGKYQLSKHFRFPWPVNVSSSYCI 287 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d-g--~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~ 287 (475)
|.+|++...... ......+..+..+++| +|+|+. ++++..+ + .|++||+.+++.+..+.......
T Consensus 64 i~~~d~~~~~~~--~~~~~~~~~~~~~~~~--s~dg~~-l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~------- 131 (331)
T 3u4y_A 64 LVQIETQLEPPK--VVAIQEGQSSMADVDI--TPDDQF-AVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAV------- 131 (331)
T ss_dssp EEEEECSSSSCE--EEEEEECSSCCCCEEE--CTTSSE-EEECCCSSSSCEEEEEETTTTEEEEEEECCTTEE-------
T ss_pred EEEEECCCCcee--EEecccCCCCccceEE--CCCCCE-EEEecCCCCcccEEEEECCCCCeEEEEECCCCcc-------
Confidence 999999877652 1333344555555888 999997 4455444 3 89999999999888887666667
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEE-eCCCc-EEEEECCCCceEE----EeecCCCCeEEEEEecCCCE
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIV-GDNPD-GLLVDSMTGKTIA----SLCGHLDFSFASAWHPNGVT 361 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~dg~-i~iwd~~~~~~~~----~l~~h~~~v~~~~~sp~g~~ 361 (475)
+++|+|+|++++++ ..++. +.+|++.....+. ........+..++|+|+|++
T Consensus 132 ----------------------~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 132 ----------------------GIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNF 189 (331)
T ss_dssp ----------------------EEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSE
T ss_pred ----------------------ceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCE
Confidence 99999999866555 55578 9999987543321 12234456899999999996
Q ss_pred EEEEe-CCCeEEEEECCCCCce---EEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEEECCCCee--EEEEecc---
Q 011924 362 FATGN-QDKTCRIWDLRNLSES---VAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYE--KEQEIDF--- 431 (475)
Q Consensus 362 l~t~s-~dg~v~iwd~~~~~~~---~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~~~~~~--~~~~~~~--- 431 (475)
+++++ .+++|.+||+.. ++. +..+..+ ..+..++|+|+|++|+++. .++.|.+||+.+++. +..+...
T Consensus 190 l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 267 (331)
T 3u4y_A 190 AFVANLIGNSIGILETQN-PENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLI 267 (331)
T ss_dssp EEEEETTTTEEEEEECSS-TTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCC
T ss_pred EEEEeCCCCeEEEEECCC-CcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccccccc
Confidence 65554 689999999976 565 6666654 5678999999999777665 467899999999876 3333322
Q ss_pred -CC---CeEEEEEcCCCCeEEEEEecCCc
Q 011924 432 -FG---EISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 432 -~~---~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
.. ....++|+|||++|++++.++..
T Consensus 268 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 296 (331)
T 3u4y_A 268 DPRPLFGANQMALNKTETKLFISANISRE 296 (331)
T ss_dssp CCGGGTTCCCEEECTTSSEEEEEETTTTE
T ss_pred CCCCcccccceEECCCCCEEEEecCCCCc
Confidence 11 23568999999999988877643
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=7.7e-21 Score=182.97 Aligned_cols=232 Identities=16% Similarity=0.169 Sum_probs=162.8
Q ss_pred eEEEEEE--cCcEEEEEecC-ceEEEEeCC--CCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC
Q 011924 191 QVSTLAV--KDKLLVAGGFQ-GELICKHLD--RPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~d-g~i~vw~~~--~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~ 265 (475)
.+.++++ ++++|++++.+ +.|.+|+++ ...... ......+ ..+..++| +|+|+.+++++..++.|.+|++.
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~--s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF-AAESALP-GSLTHIST--DHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE-EEEEECS-SCCSEEEE--CTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceee-ccccccC-CCCcEEEE--cCCCCEEEEEecCCCeEEEEECC
Confidence 3455666 88888888876 999999997 333222 2222222 26788888 99999856666668999999993
Q ss_pred ---CCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe-CCCcEEEEECCC-CceE
Q 011924 266 ---KYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG-DNPDGLLVDSMT-GKTI 340 (475)
Q Consensus 266 ---~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~dg~i~iwd~~~-~~~~ 340 (475)
..+....+.....+. +++|+|+|+.+++++ .++.|.+||+.+ ++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 115 DGLPVGVVDVVEGLDGCH-----------------------------SANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp TTEEEEEEEEECCCTTBC-----------------------------CCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred CCccccccccccCCCCce-----------------------------EEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 444444554444566 889999999888887 889999999987 6543
Q ss_pred E----Eeec-CCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCC-Cce--EEEEec---C---CCceEEEEEccCCCEE
Q 011924 341 A----SLCG-HLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNL-SES--VAVLKG---N---LGAIRSIRYTSDGRYM 405 (475)
Q Consensus 341 ~----~l~~-h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~-~~~--~~~~~~---~---~~~v~~l~~spdg~~l 405 (475)
. .+.. ....+.+++|+|+++++++++ .++.|.+||+... +.. ...+.. . ...+..++|+|+|++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l 245 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 245 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE
Confidence 2 2333 334788999999999776555 7899999999531 221 222221 1 2356689999999988
Q ss_pred EE-EcCCCeEEEEECC--CC--eeEEEEeccCCCeEEEEEcCCCCeEEEEEe-cCCc
Q 011924 406 AT-AEPADFVHVYDVK--SG--YEKEQEIDFFGEISGISFSPDTESLFIGVW-DRTY 456 (475)
Q Consensus 406 a~-~~~dg~i~iwd~~--~~--~~~~~~~~~~~~i~~l~fspdg~~l~~~~~-D~~~ 456 (475)
++ +..++.|.+||+. ++ ..+..+..+ +.+.+++|+|+|++|++++. |+.+
T Consensus 246 ~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v 301 (343)
T 1ri6_A 246 YACDRTASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHI 301 (343)
T ss_dssp EEEETTTTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTTCEE
T ss_pred EEEecCCCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCCCCeE
Confidence 74 4578999999998 33 333333333 44899999999999998874 4433
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=8.1e-21 Score=202.98 Aligned_cols=311 Identities=10% Similarity=0.032 Sum_probs=221.2
Q ss_pred cceeEEecCCCeEEEec--CC-----eEEEEecCCCCceEEEeccCCCCCCCCC---CCCcccccc----ceeEEEEEE-
Q 011924 133 LRNLVWATSKHDVYLMS--HF-----SVIHWSSLTSSRSQVLNVSGHVAPSEKH---PGSLLEGFT----QTQVSTLAV- 197 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~--~~-----~v~~w~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~v~~l~~- 197 (475)
.+.+.|++++..|++.+ ++ .|.+|+..+++...++...+.. |.... ......... ...|.+++|
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVL-PGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC---------------------CCEESCCCEEC
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcc-cccccccchhhhhhhhhhhccccCcceeEEC
Confidence 45677899998888865 45 8999999888877766543221 00000 000000000 023667777
Q ss_pred -cCcEEEEEecCceEEEEeCCCCC--ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee
Q 011924 198 -KDKLLVAGGFQGELICKHLDRPG--VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR 274 (475)
Q Consensus 198 -~~~~lvsg~~dg~i~vw~~~~~~--~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 274 (475)
+|++|++++. +.|++|++.... .. ..+..+...+..++| ||+|+. |+.++ ++.|++||+.+++......
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~---~~l~~~~~~~~~~~~--SPDG~~-la~~~-~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAV---RQLTHGEGFATDAKL--SPKGGF-VSFIR-GRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSC---CBCCCSSSCEEEEEE--CTTSSE-EEEEE-TTEEEEEETTTTEEEECCC
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceE---EEcccCCcccccccC--CCCCCE-EEEEe-CCcEEEEecCCCCEEEecc
Confidence 8999998876 999999998751 12 233456677889999 999997 66665 5699999999887665433
Q ss_pred c--------------------cccEEeccCCceEE---------------------------------------EEEEee
Q 011924 275 F--------------------PWPVNVSSSYCIIL---------------------------------------LCRLLN 295 (475)
Q Consensus 275 ~--------------------~~~v~~s~~~~~l~---------------------------------------~~~v~d 295 (475)
. ...+.|||++..|+ .+.+||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 1 25678999998774 345678
Q ss_pred ccc-ceEEEEe------eeeeeEEECCCCcEEEEEeC-----CCcEEEEECCCCceEEEeecCCC----CeEEEEEecCC
Q 011924 296 FMT-EKVIICL------LCLQHSSQSPDGKLLIIVGD-----NPDGLLVDSMTGKTIASLCGHLD----FSFASAWHPNG 359 (475)
Q Consensus 296 ~~~-~~~~~~~------~~i~~~~~sp~g~~l~~~~~-----dg~i~iwd~~~~~~~~~l~~h~~----~v~~~~~sp~g 359 (475)
..+ ++..... ..+..++| |+|+.|++++. +..|++||+.+++....+..+.. .+.+++|+|+|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTS
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCC
Confidence 777 6654332 25678999 99999997753 56799999999988777766543 45689999999
Q ss_pred CEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEE-EEccCCCEEEEE-cCCC--eEEEEECCC-CeeEEEEeccCCC
Q 011924 360 VTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSI-RYTSDGRYMATA-EPAD--FVHVYDVKS-GYEKEQEIDFFGE 434 (475)
Q Consensus 360 ~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l-~~spdg~~la~~-~~dg--~i~iwd~~~-~~~~~~~~~~~~~ 434 (475)
+++++++.++.++||.+...+. ...+..+...+..+ .|+|+|+.|+.. +.++ .++||++.. +..+..+.. ...
T Consensus 349 ~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~ 426 (741)
T 2ecf_A 349 SILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APG 426 (741)
T ss_dssp CEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCS
T ss_pred eEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCC
Confidence 9999999999888887753345 77788787788887 599999977654 4454 899999864 444455544 667
Q ss_pred eEEEEEcCCCCeEEEEEecCC
Q 011924 435 ISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 435 i~~l~fspdg~~l~~~~~D~~ 455 (475)
+..++|||||++|++...+..
T Consensus 427 ~~~~~~spdg~~l~~~~~~~~ 447 (741)
T 2ecf_A 427 MHSASFARNASVYVDSWSNNS 447 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETT
T ss_pred ceEEEECCCCCEEEEEecCCC
Confidence 889999999999998766544
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1.5e-20 Score=193.14 Aligned_cols=245 Identities=12% Similarity=0.092 Sum_probs=192.3
Q ss_pred EEcCcEEEEEecCceEEEEeCCCCCceEEEeeec-CCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEEC--CCCeeeee
Q 011924 196 AVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTY-DDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM--GKYQLSKH 272 (475)
Q Consensus 196 ~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~-~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~--~~~~~~~~ 272 (475)
+.++.++++++.+++|.+||..+.+.. ..+. ++. +..+++ +|+|++ +++++.|++|++||+ .+++.+..
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~---~~i~~g~~--~~~v~~--spdg~~-l~v~~~d~~V~v~D~~~~t~~~~~~ 217 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIV---KVIDTGYA--VHISRM--SASGRY-LLVIGRDARIDMIDLWAKEPTKVAE 217 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEE---EEEECSTT--EEEEEE--CTTSCE-EEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEE---EEEecCcc--cceEEE--CCCCCE-EEEECCCCeEEEEECcCCCCcEEEE
Confidence 347788999999999999999876654 2333 333 778888 999997 778888999999999 88888877
Q ss_pred ee---ccccEEecc----CCceEE-------EEEEeecccceEEEEee---------------eeeeEEECCCCcEE-EE
Q 011924 273 FR---FPWPVNVSS----SYCIIL-------LCRLLNFMTEKVIICLL---------------CLQHSSQSPDGKLL-II 322 (475)
Q Consensus 273 ~~---~~~~v~~s~----~~~~l~-------~~~v~d~~~~~~~~~~~---------------~i~~~~~sp~g~~l-~~ 322 (475)
+. .+..+.|+| +++.++ .+.+||..+++.+..+. .+.++.++|++..+ ++
T Consensus 218 i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 218 IKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred EecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 76 355677999 998874 57899999888766543 35688999976654 55
Q ss_pred EeCCCcEEEEECCCCceEE--EeecCCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCCCceEEEEec----CCCceEE
Q 011924 323 VGDNPDGLLVDSMTGKTIA--SLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSESVAVLKG----NLGAIRS 395 (475)
Q Consensus 323 ~~~dg~i~iwd~~~~~~~~--~l~~h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~~~~~~~~~~----~~~~v~~ 395 (475)
...++.|.+||+.+++.+. .+. +...+.+++|+|+|++|++++ .+++|.+||+.+ ++++..+.. |.+....
T Consensus 298 ~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~~i~~g~~ph~g~g~~ 375 (543)
T 1nir_A 298 VKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPHPGRGAN 375 (543)
T ss_dssp ETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSBCCTTCEE
T ss_pred ECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeEEEeeccCCCCCCCCCcc
Confidence 5678999999998776543 443 567788999999999877665 588999999987 778877764 4433333
Q ss_pred EEEccC-CCEEEEEc-CCCeEEEEECCC-------CeeEEEEeccCCCeEEEEEcCCCCeEEEEE
Q 011924 396 IRYTSD-GRYMATAE-PADFVHVYDVKS-------GYEKEQEIDFFGEISGISFSPDTESLFIGV 451 (475)
Q Consensus 396 l~~spd-g~~la~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~i~~l~fspdg~~l~~~~ 451 (475)
+ ++|+ |++++++. .+++|.|||+.+ ++.+.++..|.+.+..++|+|+|++|++++
T Consensus 376 ~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 376 F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred c-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 3 4787 66777775 579999999988 788889988888899999999999999986
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=7e-21 Score=203.48 Aligned_cols=256 Identities=8% Similarity=0.003 Sum_probs=192.8
Q ss_pred ceeEEEEEE--cCcEEEEEec-Cc-----eEEEEeCCCCCceEEEeeecCC--C----------------------Ccee
Q 011924 189 QTQVSTLAV--KDKLLVAGGF-QG-----ELICKHLDRPGVSFCSRTTYDD--N----------------------AITN 236 (475)
Q Consensus 189 ~~~v~~l~~--~~~~lvsg~~-dg-----~i~vw~~~~~~~~~~~~~~~~~--~----------------------~~v~ 236 (475)
...+.+++| +|++|++++. +| .|++|++.+.... .+...+ . ..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR---LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE---EEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee---EccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 446888888 8999999988 88 9999999876543 222221 1 2367
Q ss_pred EEEEEeCCCCCeEEEEEeCCCeEEEEECCCC---eeeeeeec---cccEEeccCCceEE-----EEEEeecccceEEEEe
Q 011924 237 AVEIYGSPSGAVHFTASNNDCGVRDFDMGKY---QLSKHFRF---PWPVNVSSSYCIIL-----LCRLLNFMTEKVIICL 305 (475)
Q Consensus 237 ~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~---~~~~~~~~---~~~v~~s~~~~~l~-----~~~v~d~~~~~~~~~~ 305 (475)
.++| ||+|+. |++++. +.|++||+.++ +......+ ...+.|||+|..++ .+.+||..+++.....
T Consensus 113 ~~~~--SpDg~~-l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 113 DYQW--SPDAQR-LLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp CCEE--CTTSSE-EEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECC
T ss_pred eeEE--CCCCCE-EEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEec
Confidence 8888 999997 666655 99999999887 44333323 34567999999886 5789999887765432
Q ss_pred ee--------------------eeeEEECCCCcEEEEEeCCC---------------------------------cEEEE
Q 011924 306 LC--------------------LQHSSQSPDGKLLIIVGDNP---------------------------------DGLLV 332 (475)
Q Consensus 306 ~~--------------------i~~~~~sp~g~~l~~~~~dg---------------------------------~i~iw 332 (475)
.. +.+++|||||++|++++.++ .|++|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 21 36799999999999987665 78899
Q ss_pred ECCC-CceEEEee--cCCCCeEEEEEecCCCEEEEEeC-----CCeEEEEECCCCCceEEEEecCCC----ceEEEEEcc
Q 011924 333 DSMT-GKTIASLC--GHLDFSFASAWHPNGVTFATGNQ-----DKTCRIWDLRNLSESVAVLKGNLG----AIRSIRYTS 400 (475)
Q Consensus 333 d~~~-~~~~~~l~--~h~~~v~~~~~sp~g~~l~t~s~-----dg~v~iwd~~~~~~~~~~~~~~~~----~v~~l~~sp 400 (475)
|+.+ ++...... .|...+.+++| |||++|++++. +..|.+||+.+ ++....+..+.. .+..++|+|
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS-NQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT-CCEEEEEEEECSSCCCCCSCCEECT
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC-CceEEEEEcCCCCcCCcCCceEECC
Confidence 9988 87655443 37788999999 99999997764 56899999976 666666655443 456899999
Q ss_pred CCCEEEEEcCCCeEEEEECC-CCeeEEEEeccCCCeEEE-EEcCCCCeEEEEEecC
Q 011924 401 DGRYMATAEPADFVHVYDVK-SGYEKEQEIDFFGEISGI-SFSPDTESLFIGVWDR 454 (475)
Q Consensus 401 dg~~la~~~~dg~i~iwd~~-~~~~~~~~~~~~~~i~~l-~fspdg~~l~~~~~D~ 454 (475)
||+++++++.++.++||.+. ++. ...+..+...+..+ .|||+|+.|+..+.+.
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~ 401 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIE 401 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSS
T ss_pred CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCC
Confidence 99999999999988888765 344 66777777888887 5999999887665544
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=2.8e-20 Score=178.57 Aligned_cols=217 Identities=14% Similarity=0.103 Sum_probs=167.6
Q ss_pred cEEEEEecCceEEEEeCCCCCceEEEeeecCCCC-ceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccc-
Q 011924 200 KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA-ITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW- 277 (475)
Q Consensus 200 ~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~-~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~- 277 (475)
++|++++.++.|.+||+.+.+... .+...+.. .+..++| +|+|+.++++++.++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~--s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDK--VITIADAGPTPMVPMV--APGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEE--EEECTTCTTCCCCEEE--CTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEE--EEEcCCCCCCccceEE--cCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 578999999999999998655432 22223221 3677888 99998877788788999999999988877766432
Q ss_pred -----cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe------------CCCcEEEEECCCCceE
Q 011924 278 -----PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG------------DNPDGLLVDSMTGKTI 340 (475)
Q Consensus 278 -----~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~------------~dg~i~iwd~~~~~~~ 340 (475)
.+. +++|+|+|++|+++. .++.|.+||+.+++.+
T Consensus 78 ~~~~~~~~-----------------------------~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 78 EERVKSLF-----------------------------GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp TEEEECTT-----------------------------CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred cccccccc-----------------------------ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 334 889999999998886 5799999999999888
Q ss_pred EEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecC-------------------------------
Q 011924 341 ASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN------------------------------- 389 (475)
Q Consensus 341 ~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~------------------------------- 389 (475)
..+.. ...+.+++|+|+|++|+++ ++.|.+||+.+ ++.+..+..+
T Consensus 129 ~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 204 (337)
T 1pby_B 129 KAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEA-GTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYT 204 (337)
T ss_dssp EEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTT-TEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEE
T ss_pred EEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCC-CcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeec
Confidence 77764 4567889999999988888 57899999875 4443333221
Q ss_pred -----------------------------------CCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCC
Q 011924 390 -----------------------------------LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGE 434 (475)
Q Consensus 390 -----------------------------------~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 434 (475)
...+.+++|+|+|++|+++ ++.|.+||+.+++.+..+. ....
T Consensus 205 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~ 281 (337)
T 1pby_B 205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHS 281 (337)
T ss_dssp EBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSC
T ss_pred cccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec-CCCc
Confidence 1234568999999999988 6899999999988776655 3456
Q ss_pred eEEEEEcCCCCeEEEEEecCCc
Q 011924 435 ISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 435 i~~l~fspdg~~l~~~~~D~~~ 456 (475)
+.+++|+|+|++|++++.|+.+
T Consensus 282 ~~~~~~s~dg~~l~~~~~~~~i 303 (337)
T 1pby_B 282 YYSVNVSTDGSTVWLGGALGDL 303 (337)
T ss_dssp CCEEEECTTSCEEEEESBSSEE
T ss_pred eeeEEECCCCCEEEEEcCCCcE
Confidence 8899999999999998666543
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=2.7e-20 Score=197.84 Aligned_cols=266 Identities=12% Similarity=0.091 Sum_probs=185.6
Q ss_pred ccceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 132 QLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 132 ~lr~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
.+..+.|+++ ..+++..+..+.+|+..+++...+....+ .+.+++| +|+.|+++ .++
T Consensus 83 ~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-------------------~~~~~~~SpdG~~la~~-~~~ 141 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDTNE-------------------ETASLDFSPVGDRVAYV-RNH 141 (706)
T ss_dssp CCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEECCTT-------------------CCTTCEECTTSSEEEEE-ETT
T ss_pred CceeEEECCC-CeEEEEECCEEEEEECCCCceEEccCCcc-------------------cccCCcCCCCCCEEEEE-ECC
Confidence 4556668888 77777788999999988776554432211 2333445 88898885 689
Q ss_pred eEEEEeCCC-----CCceEEEeeecCCCCc--------------eeEEEEEeCCCCCeEEEEEe----------------
Q 011924 210 ELICKHLDR-----PGVSFCSRTTYDDNAI--------------TNAVEIYGSPSGAVHFTASN---------------- 254 (475)
Q Consensus 210 ~i~vw~~~~-----~~~~~~~~~~~~~~~~--------------v~~l~~~~s~~g~~~l~s~s---------------- 254 (475)
.|++|++.. .... .+...+... +.++.| ||+|+. |++++
T Consensus 142 ~i~v~~~~~~~~~~g~~~---~~~~~~~~~~~~g~~~~~ee~~~~~~~~~--SpDg~~-la~~~~d~~~~~~~~~~~~~~ 215 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSRAI---AVTIDGTETLVYGQAVHQREFGIEKGTFW--SPKGSC-LAFYRMDQSMVKPTPIVDYHP 215 (706)
T ss_dssp EEEEEECBCTTSCCCCCE---ESCSCCBTTEEESSCCGGGCTTCCCSEEE--CTTSSE-EEEEEEECTTSCCEEEEECCS
T ss_pred eEEEEecCcccccCCCcE---EeccCCCCCeEcccchhhhhcCCCceEEE--CCCCCE-EEEEEECCCCCceEEeeccCC
Confidence 999999986 4433 222222222 477888 999997 55554
Q ss_pred -----------------CCCeEEEEECCCCeeeeeee---ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEEC
Q 011924 255 -----------------NDCGVRDFDMGKYQLSKHFR---FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQS 314 (475)
Q Consensus 255 -----------------~dg~v~iwd~~~~~~~~~~~---~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~s 314 (475)
.+..|++||+.+++...... +...+. +++|+
T Consensus 216 ~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~s 266 (706)
T 2z3z_A 216 LEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT-----------------------------NLSWS 266 (706)
T ss_dssp SSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE-----------------------------EEEEC
T ss_pred CCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe-----------------------------eEEEE
Confidence 23445555555554332221 222333 89999
Q ss_pred CCCcEEEEEeCCC-----cEEEEECCCCceEEEee--cCCC---CeEEEEEec--CCCEEEEEeCCCeEEEEECCCCCce
Q 011924 315 PDGKLLIIVGDNP-----DGLLVDSMTGKTIASLC--GHLD---FSFASAWHP--NGVTFATGNQDKTCRIWDLRNLSES 382 (475)
Q Consensus 315 p~g~~l~~~~~dg-----~i~iwd~~~~~~~~~l~--~h~~---~v~~~~~sp--~g~~l~t~s~dg~v~iwd~~~~~~~ 382 (475)
|+|+.|++++.++ .|++||+.+++....+. .+.. .+.+++|+| +|+++++++.++.++||.+...+..
T Consensus 267 pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~ 346 (706)
T 2z3z_A 267 PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRL 346 (706)
T ss_dssp TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCE
T ss_pred CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCE
Confidence 9999999987665 89999999984444332 2222 246789999 9999999999999999988644677
Q ss_pred EEEEecCCCceEE-EEEccCCCEEEEEcCC-C----eEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 383 VAVLKGNLGAIRS-IRYTSDGRYMATAEPA-D----FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 383 ~~~~~~~~~~v~~-l~~spdg~~la~~~~d-g----~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
+..+..+...+.. ++|+|+|+.|+.++.+ + .|..||+.++. ... ..+...+.+++|||||++|+.++.+..
T Consensus 347 ~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~-l~~~~~~~~~~~spdg~~l~~~~~~~~ 423 (706)
T 2z3z_A 347 IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKD-LTPESGMHRTQLSPDGSAIIDIFQSPT 423 (706)
T ss_dssp EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEE-SCCSSSEEEEEECTTSSEEEEEEECSS
T ss_pred EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-cee-ccCCCceEEEEECCCCCEEEEEecCCC
Confidence 7888877777876 7999999987765544 3 67777877765 223 336677999999999999988765543
No 139
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=8.5e-21 Score=189.71 Aligned_cols=235 Identities=11% Similarity=0.028 Sum_probs=166.7
Q ss_pred EEEEEcCcEEEEEecCceEEEEeCCCC----------CceE--EEeeecCCCCceeEEEEEeCCCCCeEEE---EEeCCC
Q 011924 193 STLAVKDKLLVAGGFQGELICKHLDRP----------GVSF--CSRTTYDDNAITNAVEIYGSPSGAVHFT---ASNNDC 257 (475)
Q Consensus 193 ~~l~~~~~~lvsg~~dg~i~vw~~~~~----------~~~~--~~~~~~~~~~~v~~l~~~~s~~g~~~l~---s~s~dg 257 (475)
.+++.++.++++|+.+| +++|+.... .... .......+...|.+++| +|+|+.+++ +++.|+
T Consensus 42 lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--spdg~~lav~~~sgs~d~ 118 (434)
T 2oit_A 42 LAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLAL--SCDNLTLSACMMSSEYGS 118 (434)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEE--CTTSCEEEEEEEETTTEE
T ss_pred EEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEE--cCCCCEEEEEEeccCCCc
Confidence 34444788999999888 888765311 0000 00112235667999999 999997443 788999
Q ss_pred eEEEEECCCC--------ee---eeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC-CcEEEEEe
Q 011924 258 GVRDFDMGKY--------QL---SKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD-GKLLIIVG 324 (475)
Q Consensus 258 ~v~iwd~~~~--------~~---~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~-g~~l~~~~ 324 (475)
+|++||+.++ +. +..+. |...|. +++|+|+ +.+|++++
T Consensus 119 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-----------------------------~v~~~p~~~~~las~s 169 (434)
T 2oit_A 119 IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI-----------------------------DMKWNPTVPSMVAVCL 169 (434)
T ss_dssp EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE-----------------------------EEEECSSCTTEEEEEE
T ss_pred eEEEEEccccccCCcCCcceeeeeeccCCCCCceE-----------------------------EEEECCCCCCEEEEEE
Confidence 9999998654 22 22222 577888 9999997 89999999
Q ss_pred CCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCC-------CceEEEE
Q 011924 325 DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL-------GAIRSIR 397 (475)
Q Consensus 325 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~-------~~v~~l~ 397 (475)
.||.|++||++++..+....+|...|.+++|+|+|++|++|+.||+|++||++ +.....+..+. ..|.+++
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT--LQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT--CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC--CcccccccCCcccCCCCceeEEEEE
Confidence 99999999999998777777899999999999999999999999999999997 34555554432 3789999
Q ss_pred EccCCCEEEEEc-CCC------eEEEEECCCCe-----eEEEEecc-------CCCeEEEEEcCCCCeEEEEEecCCcce
Q 011924 398 YTSDGRYMATAE-PAD------FVHVYDVKSGY-----EKEQEIDF-------FGEISGISFSPDTESLFIGVWDRTYGS 458 (475)
Q Consensus 398 ~spdg~~la~~~-~dg------~i~iwd~~~~~-----~~~~~~~~-------~~~i~~l~fspdg~~l~~~~~D~~~~~ 458 (475)
|++++.++++.+ .+| .+++|++.+.. ....+... ..+...+.+-++.+++++++....--.
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~ 327 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVS 327 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCE
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCcee
Confidence 999998876543 333 39999997642 11111111 122223344488888888877655444
Q ss_pred EEE
Q 011924 459 LLE 461 (475)
Q Consensus 459 ll~ 461 (475)
++.
T Consensus 328 vl~ 330 (434)
T 2oit_A 328 ILA 330 (434)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=3e-20 Score=174.35 Aligned_cols=212 Identities=18% Similarity=0.220 Sum_probs=163.0
Q ss_pred EEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC-Ceeeeeeec--cccEE
Q 011924 204 AGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQLSKHFRF--PWPVN 280 (475)
Q Consensus 204 sg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~-~~~~~~~~~--~~~v~ 280 (475)
.++.++.|++|++...... .+..|...+.+++| +|+|+. +++++ ++.|++||+.+ ++....... ...+.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~----~~~~~~~~v~~~~~--spdg~~-l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR----VVWQTPELFEAPNW--SPDGKY-LLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE----EEEEESSCCEEEEE--CTTSSE-EEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CCCcceeEEEEeCCCCcee----eeccCCcceEeeEE--CCCCCE-EEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence 4567899999999865433 23346778999999 999996 66664 88999999998 776655542 24556
Q ss_pred eccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC--C--CcEEEEECCCCceEEEeecCCCCeEEEEEe
Q 011924 281 VSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD--N--PDGLLVDSMTGKTIASLCGHLDFSFASAWH 356 (475)
Q Consensus 281 ~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~--d--g~i~iwd~~~~~~~~~l~~h~~~v~~~~~s 356 (475)
+++|+|+|++|++++. + ..|.++++.+++ ...+..+. .+..++|+
T Consensus 89 -----------------------------~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~s 137 (297)
T 2ojh_A 89 -----------------------------DHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWS 137 (297)
T ss_dssp -----------------------------CCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEEC
T ss_pred -----------------------------ceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEEC
Confidence 8899999999999983 3 445555555555 44555443 48899999
Q ss_pred cCCCEEE-EEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEEECC-CCeeEEEEeccCC
Q 011924 357 PNGVTFA-TGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVK-SGYEKEQEIDFFG 433 (475)
Q Consensus 357 p~g~~l~-t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~~-~~~~~~~~~~~~~ 433 (475)
|++++|+ +++.++.++||++.........+..+...+.+++|+|+|++|++++ .++.++||++. .+.....+..+..
T Consensus 138 pdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 217 (297)
T 2ojh_A 138 PDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY 217 (297)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE
T ss_pred CCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc
Confidence 9999887 7788999999997543455667777778899999999999888766 58889999875 4556667777778
Q ss_pred CeEEEEEcCCCCeEEEEEecC
Q 011924 434 EISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 434 ~i~~l~fspdg~~l~~~~~D~ 454 (475)
.+..++|+|+|++|++++.++
T Consensus 218 ~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 218 GDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp EEEEEEECTTSSEEEEEEEET
T ss_pred ccCCeEECCCCCEEEEEEcCC
Confidence 899999999999999998875
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=2.9e-19 Score=173.02 Aligned_cols=230 Identities=13% Similarity=0.108 Sum_probs=156.2
Q ss_pred EEEEE--cCcEEEEEec---CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC-
Q 011924 193 STLAV--KDKLLVAGGF---QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK- 266 (475)
Q Consensus 193 ~~l~~--~~~~lvsg~~---dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~- 266 (475)
..+++ +++ |++++. ++.|.+|++....... ......+...+..++| +|+|+.+++++..++.|++|++..
T Consensus 43 ~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~-~~~~~~~~~~p~~~a~--spdg~~l~~~~~~~~~v~v~~~~~~ 118 (347)
T 3hfq_A 43 TYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHK-LNTVVAPGTPPAYVAV--DEARQLVYSANYHKGTAEVMKIAAD 118 (347)
T ss_dssp CCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEE-EEEEEEESCCCSEEEE--ETTTTEEEEEETTTTEEEEEEECTT
T ss_pred ceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEE-eeeeecCCCCCEEEEE--CCCCCEEEEEeCCCCEEEEEEeCCC
Confidence 34555 777 555544 6899999996544322 2222334556788888 999997455554789999999963
Q ss_pred Ce--eeeeeecc--c--------cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEEC
Q 011924 267 YQ--LSKHFRFP--W--------PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDS 334 (475)
Q Consensus 267 ~~--~~~~~~~~--~--------~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~ 334 (475)
+. .+..+... . .+. +++|+|+|+++++...++.|.+|++
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~-----------------------------~~~~spdg~l~v~~~~~~~v~~~~~ 169 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIH-----------------------------YTDLTPDNRLAVIDLGSDKVYVYNV 169 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEE-----------------------------EEEECTTSCEEEEETTTTEEEEEEE
T ss_pred CCeeecceeecCCCCCCccccCCCce-----------------------------EEEECCCCcEEEEeCCCCEEEEEEE
Confidence 32 22333221 1 144 7999999996666667889999999
Q ss_pred C-CCceEE--EeecC-CCCeEEEEEecCCCEEEEE-eCCCeEEEEECCCC-Cce--EEEEecCC------CceEEEEEcc
Q 011924 335 M-TGKTIA--SLCGH-LDFSFASAWHPNGVTFATG-NQDKTCRIWDLRNL-SES--VAVLKGNL------GAIRSIRYTS 400 (475)
Q Consensus 335 ~-~~~~~~--~l~~h-~~~v~~~~~sp~g~~l~t~-s~dg~v~iwd~~~~-~~~--~~~~~~~~------~~v~~l~~sp 400 (475)
. +++... .+..+ ...+..++|+|+|++++++ ..++.|.+|++... ++. +..+.... ..+..++|+|
T Consensus 170 ~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 170 SDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp CTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred CCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 8 554332 22322 2367889999999966664 56889999998641 322 22333222 3588999999
Q ss_pred CCCEEE-EEcCCCeEEEEECCC-C--eeEEEEeccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 401 DGRYMA-TAEPADFVHVYDVKS-G--YEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 401 dg~~la-~~~~dg~i~iwd~~~-~--~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
+|++|+ +...++.|.+|++.. + ..+..+..+...+.+++|+|||++|+++..+..
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 308 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD 308 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC
Confidence 999885 455689999999872 2 444455555667899999999999999887643
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=1.7e-20 Score=195.04 Aligned_cols=258 Identities=11% Similarity=-0.035 Sum_probs=191.4
Q ss_pred ceeEEEEEE--cCcEEEEEec-CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeC---CCeEEEE
Q 011924 189 QTQVSTLAV--KDKLLVAGGF-QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN---DCGVRDF 262 (475)
Q Consensus 189 ~~~v~~l~~--~~~~lvsg~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~---dg~v~iw 262 (475)
..+|.++++ +|+.|++++. +|++.+|++.... . .+++..+...+..+.| +|+ + ++++++. +...++|
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-~--~~lt~~~~~~~~~~~~--spd-~-~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-T--VKLNREPINSVLDPHY--GVG-R-VILVRDVSKGAEQHALF 93 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-E--EECCSSCCSEECEECT--TCS-E-EEEEEECSTTSCCEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCC-c--EeeecccccccccccC--CCC-e-EEEEeccCCCCcceEEE
Confidence 447888877 9999998887 9999999985432 2 2444444467888888 998 4 4666654 4555665
Q ss_pred ECCC---Ceeeeeee---ccccEEeccCCceEE-------EEEEeecccceEEEEee-eeeeEEECCCCcEEEEEeCC--
Q 011924 263 DMGK---YQLSKHFR---FPWPVNVSSSYCIIL-------LCRLLNFMTEKVIICLL-CLQHSSQSPDGKLLIIVGDN-- 326 (475)
Q Consensus 263 d~~~---~~~~~~~~---~~~~v~~s~~~~~l~-------~~~v~d~~~~~~~~~~~-~i~~~~~sp~g~~l~~~~~d-- 326 (475)
.+.. +... .+. ......+++++..++ ...+||..+++...... ...+++|||||++|++++.+
T Consensus 94 ~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 94 KVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp EEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEET
T ss_pred EEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCC
Confidence 4432 2222 221 222345777775442 24599998876543322 22688999999999988766
Q ss_pred --CcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCC--eEEEEECCCCCceEEEEecCCCceEEEE-----
Q 011924 327 --PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDK--TCRIWDLRNLSESVAVLKGNLGAIRSIR----- 397 (475)
Q Consensus 327 --g~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg--~v~iwd~~~~~~~~~~~~~~~~~v~~l~----- 397 (475)
+.|++||+.+++.. .+..|...+..++|+|||+.|+++..++ +|++||+.. ++.. .+..+...+..++
T Consensus 173 ~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD-GSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp TEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT-CCEE-ECCCSCSHHHHHCCSEEE
T ss_pred CCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC-CcEE-EccCCCcChhhhhhcccc
Confidence 78999999888765 6788889999999999999999888888 899999976 5555 6677776666677
Q ss_pred ---EccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcceEEEEE
Q 011924 398 ---YTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYG 463 (475)
Q Consensus 398 ---~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~~ll~~~ 463 (475)
|+|||+++++++.++.++||++ |+... ...+.+.+++|+ +|+.+++++.+.+-..+..+.
T Consensus 250 ~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred ceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 9999999999999999999999 65544 345778999999 999999988887766665554
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=4.1e-19 Score=171.79 Aligned_cols=224 Identities=13% Similarity=0.043 Sum_probs=176.0
Q ss_pred eEEEEEE--cCcEEEEEec-------CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEE
Q 011924 191 QVSTLAV--KDKLLVAGGF-------QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~-------dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~i 261 (475)
.+..+++ ++++|++++. ++.|.+||..+.+....... ......+++ +|+|+.+++++..++.|.+
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~--s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN----DLKPFGATI--NNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE----SSCCCSEEE--ETTTTEEEEEETTTTEEEE
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec----CCCcceEEE--CCCCCEEEEEecCCCEEEE
Confidence 3556666 7777777763 67899999987665432221 223567788 9999986777777899999
Q ss_pred EECCCCeeeeeeecccc----------EEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe--CCCcE
Q 011924 262 FDMGKYQLSKHFRFPWP----------VNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG--DNPDG 329 (475)
Q Consensus 262 wd~~~~~~~~~~~~~~~----------v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~--~dg~i 329 (475)
||+.+++.+..+..... +. +++|+|+|+++++++ .++.|
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~s~dg~~l~~~~~~~~~~i 166 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPR-----------------------------ELVADDATNTVYISGIGKESVI 166 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEE-----------------------------EEEEETTTTEEEEEEESSSCEE
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCc-----------------------------eEEECCCCCEEEEEecCCCceE
Confidence 99999988877764221 34 889999999887776 47889
Q ss_pred EEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEec----CCCceEEEEEccCCCEE
Q 011924 330 LLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG----NLGAIRSIRYTSDGRYM 405 (475)
Q Consensus 330 ~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~----~~~~v~~l~~spdg~~l 405 (475)
.+||+.+++.+..+..+...+.+++|+|+++++++++.++.|.+||+.+ ++.+..+.. +...+..++|+|+|++|
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEE
Confidence 9999999999988876666788999999999999999999999999976 666666654 34567889999999987
Q ss_pred EEEcC-CCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEe
Q 011924 406 ATAEP-ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 406 a~~~~-dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
++++. ++.|.+||+.+++.+..+.... ..+++|+|+|++|+++..
T Consensus 246 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp EEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEET
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEEC
Confidence 77665 4899999999998777666433 367999999998887764
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=1.8e-20 Score=199.60 Aligned_cols=290 Identities=10% Similarity=0.010 Sum_probs=187.1
Q ss_pred cceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecC--
Q 011924 133 LRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQ-- 208 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~d-- 208 (475)
...+.|+++...++...++.+++|+..+++...++..... ....|.+++| +|++|++++.+
T Consensus 19 ~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~---------------~~~~v~~~~~SpDg~~l~~~~~~~~ 83 (723)
T 1xfd_A 19 DPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKI---------------ESLRAIRYEISPDREYALFSYNVEP 83 (723)
T ss_dssp CCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTT---------------TTTTCSEEEECTTSSEEEEEESCCC
T ss_pred ccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccc---------------cccccceEEECCCCCEEEEEecCcc
Confidence 3556677777766655678999999988877665532110 0013556666 99999998764
Q ss_pred -------ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeec-cccEE
Q 011924 209 -------GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF-PWPVN 280 (475)
Q Consensus 209 -------g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-~~~v~ 280 (475)
+.|.+|++...... .......+...+..++| ||+|+. |+.++. +.|++|++.+++....... ...+.
T Consensus 84 ~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~--SPdG~~-la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~ 158 (723)
T 1xfd_A 84 IYQHSYTGYYVLSKIPHGDPQ-SLDPPEVSNAKLQYAGW--GPKGQQ-LIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVI 158 (723)
T ss_dssp CSSSCCCSEEEEEESSSCCCE-ECCCTTCCSCCCSBCCB--CSSTTC-EEEEET-TEEEEESSSSSCCEEEECCCBTTTE
T ss_pred ceeecceeeEEEEECCCCceE-eccCCccccccccccEE--CCCCCE-EEEEEC-CeEEEEECCCCceEEEecCCCCCce
Confidence 78999999876542 11222334445788888 999997 666654 7999999988876654432 22220
Q ss_pred eccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCC---------------------------------
Q 011924 281 VSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNP--------------------------------- 327 (475)
Q Consensus 281 ~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg--------------------------------- 327 (475)
+. .+.-|-.... ....+.+++|||||+.|++++.++
T Consensus 159 ~~-------g~~~~v~~ee----~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 227 (723)
T 1xfd_A 159 YN-------GLSDWLYEEE----ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPS 227 (723)
T ss_dssp EE-------EECCHHHHHT----TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCE
T ss_pred EC-------cccceeEEEE----eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCe
Confidence 00 0000000000 000001677888888777776432
Q ss_pred -cEEEEECCCCceEEEeecC------CCCeEEEEEecCCCEEEEEeC----CCeEEEEECCCCCceEEEEec-CCCce--
Q 011924 328 -DGLLVDSMTGKTIASLCGH------LDFSFASAWHPNGVTFATGNQ----DKTCRIWDLRNLSESVAVLKG-NLGAI-- 393 (475)
Q Consensus 328 -~i~iwd~~~~~~~~~l~~h------~~~v~~~~~sp~g~~l~t~s~----dg~v~iwd~~~~~~~~~~~~~-~~~~v-- 393 (475)
.|++||+.+++....+..+ ...+.+++|+|||+++++.+. +..|.+||+.+ ++....+.. +.+.+
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~ 306 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT-GVCTKKHEDESEAWLHR 306 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT-CCEEEEEEEECSSCCCC
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC-CcceEEEEeccCCEEec
Confidence 7999999988866667654 567899999999998877653 35799999976 565555443 33333
Q ss_pred --EEEEEccCCCEEEEE--cCCC------eEEEEE-CCCCe--eEEEEeccCCCeEE-EEEcCCCCeEEEEEecC
Q 011924 394 --RSIRYTSDGRYMATA--EPAD------FVHVYD-VKSGY--EKEQEIDFFGEISG-ISFSPDTESLFIGVWDR 454 (475)
Q Consensus 394 --~~l~~spdg~~la~~--~~dg------~i~iwd-~~~~~--~~~~~~~~~~~i~~-l~fspdg~~l~~~~~D~ 454 (475)
..++|+|||+.|+.+ ..++ .|.+|| ..++. +...+......+.. ++|||||+.|+..+.+.
T Consensus 307 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~ 381 (723)
T 1xfd_A 307 QNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTED 381 (723)
T ss_dssp CCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSS
T ss_pred cCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCC
Confidence 378999999977754 4566 577777 34443 14444443445554 69999999998877764
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=2.5e-19 Score=171.98 Aligned_cols=218 Identities=10% Similarity=-0.015 Sum_probs=161.7
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCee-eeeeecc
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL-SKHFRFP 276 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~-~~~~~~~ 276 (475)
.+..+++++.++.|.+||+.+.+... ....+.... .++| +|+|+.+++++..++.|.+||+.+++. ...+...
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~---~~~~~~~~~-~~~~--s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILN---QITLGYDFV-DTAI--TSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEE---EEECCCCEE-EEEE--CSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred CCEEEEEecCCCeEEEEeCcccceee---eEEccCCcc-eEEE--cCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 34457788899999999998766542 222334455 7888 999997666666689999999998887 5555533
Q ss_pred ccEEeccCCceEEEEEEeecccceEEEEeeeeee-EEECCCCcEEEEEeCCC---cEEEEECCCCceEEEeecCCCCeEE
Q 011924 277 WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQH-SSQSPDGKLLIIVGDNP---DGLLVDSMTGKTIASLCGHLDFSFA 352 (475)
Q Consensus 277 ~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~-~~~sp~g~~l~~~~~dg---~i~iwd~~~~~~~~~l~~h~~~v~~ 352 (475)
.... . ++|+|+|++++++..++ .|.+||+.+++.+..+..+ ....+
T Consensus 83 ~~~~-----------------------------~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~ 132 (331)
T 3u4y_A 83 QSSM-----------------------------ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVG 132 (331)
T ss_dssp SSCC-----------------------------CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEE
T ss_pred CCCc-----------------------------cceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccc
Confidence 3333 4 89999999999555443 8999999999988887754 45689
Q ss_pred EEEecCCCEEEEE-eCCCe-EEEEECCCCCceE---EEEecCCCceEEEEEccCCCEEEEE-cCCCeEEEEECCCCee--
Q 011924 353 SAWHPNGVTFATG-NQDKT-CRIWDLRNLSESV---AVLKGNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVKSGYE-- 424 (475)
Q Consensus 353 ~~~sp~g~~l~t~-s~dg~-v~iwd~~~~~~~~---~~~~~~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~~~~~~-- 424 (475)
++|+|+|++++++ ..++. |.+|++...+... .........+..++|+|+|++|+++ ..++.|++||+.+++.
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~ 212 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENIT 212 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCE
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccc
Confidence 9999999866555 55577 9999997533321 1122334567899999999966554 5688999999998876
Q ss_pred -EEEEeccCCCeEEEEEcCCCCeEEEEEe
Q 011924 425 -KEQEIDFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 425 -~~~~~~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
+..+. ....+.+++|+|+|++|+++..
T Consensus 213 ~~~~~~-~~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 213 LLNAVG-TNNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp EEEEEE-CSSCCCCEEECTTSSEEEEECS
T ss_pred eeeecc-CCCCCceEEECCCCCEEEEEEc
Confidence 55554 4467889999999998887643
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=1e-19 Score=193.45 Aligned_cols=287 Identities=14% Similarity=0.147 Sum_probs=185.7
Q ss_pred eeEEecCCCeEEEecCCeEEEEecCCCCc--eEEEeccCC---CCCCCCCCCCccccccceeEEEEEE--cCcEEEEEec
Q 011924 135 NLVWATSKHDVYLMSHFSVIHWSSLTSSR--SQVLNVSGH---VAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF 207 (475)
Q Consensus 135 ~l~~~~~~~~v~~~~~~~v~~w~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~ 207 (475)
.+.|. +. .+++..+..| +|+..+++. ..++..... +..... .+......|.+++| + +.++.+ .
T Consensus 30 ~~~w~-g~-~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~-----~~~~~~~~v~~~~~spd-~~~~~~-~ 99 (706)
T 2z3z_A 30 GLQWM-GD-NYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCK-----FQTTDAFPSFRTLDAGR-GLVVLF-T 99 (706)
T ss_dssp TCEEE-TT-EEEEEETTEE-EEEC-------CEEEEHHHHHTTC----------------CCCEEEEETTT-TEEEEE-E
T ss_pred CCcCc-CC-eEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhc-----cccccccCceeEEECCC-CeEEEE-E
Confidence 34566 44 4444444448 999999887 666554311 000000 01112246888888 5 565555 4
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC-----Ceeeeeeecc-ccEEe
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-----YQLSKHFRFP-WPVNV 281 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~-----~~~~~~~~~~-~~v~~ 281 (475)
++.|++|++...... . ...+...+..++| ||+|+. |+++ .++.|++|++.+ ++........ ..+..
T Consensus 100 ~~~i~~~d~~~~~~~---~-l~~~~~~~~~~~~--SpdG~~-la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (706)
T 2z3z_A 100 QGGLVGFDMLARKVT---Y-LFDTNEETASLDF--SPVGDR-VAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVY 171 (706)
T ss_dssp TTEEEEEETTTTEEE---E-EECCTTCCTTCEE--CTTSSE-EEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEE
T ss_pred CCEEEEEECCCCceE---E-ccCCcccccCCcC--CCCCCE-EEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEc
Confidence 699999999765332 2 2334556788888 999997 5554 679999999988 7665443322 21200
Q ss_pred ccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe---------------------------------CCCc
Q 011924 282 SSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG---------------------------------DNPD 328 (475)
Q Consensus 282 s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~---------------------------------~dg~ 328 (475)
... +. .. ....+.+++|||||++|++++ .+..
T Consensus 172 g~~--------~~---~e----e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 172 GQA--------VH---QR----EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp SSC--------CG---GG----CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred ccc--------hh---hh----hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 000 00 00 000011889999999999987 4467
Q ss_pred EEEEECCCCceEEEee--cCCCCeEEEEEecCCCEEEEEeCCC-----eEEEEECCCCCceEEEEe-c-CCC---ceEEE
Q 011924 329 GLLVDSMTGKTIASLC--GHLDFSFASAWHPNGVTFATGNQDK-----TCRIWDLRNLSESVAVLK-G-NLG---AIRSI 396 (475)
Q Consensus 329 i~iwd~~~~~~~~~l~--~h~~~v~~~~~sp~g~~l~t~s~dg-----~v~iwd~~~~~~~~~~~~-~-~~~---~v~~l 396 (475)
|++||+.+++...... .|...+.+++|+|+|++|++++.++ +|.+||+.+ ++....+. . +.. .+..+
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET-GRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT-CCEEEEEEEEECSSCCCCCSCC
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC-CceeeEEEEccCCCeECccCCc
Confidence 9999999887654442 4667899999999999999988775 899999976 42333332 2 221 24678
Q ss_pred EEcc--CCCEEEEEcCCCeEEEEECC-CCeeEEEEeccCCCeEE-EEEcCCCCeEEEEEecCC
Q 011924 397 RYTS--DGRYMATAEPADFVHVYDVK-SGYEKEQEIDFFGEISG-ISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 397 ~~sp--dg~~la~~~~dg~i~iwd~~-~~~~~~~~~~~~~~i~~-l~fspdg~~l~~~~~D~~ 455 (475)
+|+| +|++|++++.++.++||.+. ++..+..+..+...+.. ++|+|+|+.|++++.+..
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred eeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 9999 99999999999999999875 56677777777777877 899999999988776643
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=7.4e-21 Score=190.16 Aligned_cols=189 Identities=14% Similarity=0.067 Sum_probs=146.3
Q ss_pred CceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCee----------------eeeeeccccEEeccCCceEEEEEEeec
Q 011924 233 AITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL----------------SKHFRFPWPVNVSSSYCIILLCRLLNF 296 (475)
Q Consensus 233 ~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~----------------~~~~~~~~~v~~s~~~~~l~~~~v~d~ 296 (475)
..++.+++ ++.+.. +++++.++ +++|+...... ...+.+...+.
T Consensus 37 ~~~n~lav--s~~~~~-l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---------------- 96 (434)
T 2oit_A 37 ERSSLLAV--SNKYGL-VFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH---------------- 96 (434)
T ss_dssp SCCBCEEE--ETTTTE-EEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE----------------
T ss_pred CCccEEEE--ecCCCE-EEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCccc----------------
Confidence 35788888 888876 77777777 89987532100 01122333455
Q ss_pred ccceEEEEeeeeeeEEECCCCcEEE----EEeCCCcEEEEECCCC--------ce---EEEeecCCCCeEEEEEecC-CC
Q 011924 297 MTEKVIICLLCLQHSSQSPDGKLLI----IVGDNPDGLLVDSMTG--------KT---IASLCGHLDFSFASAWHPN-GV 360 (475)
Q Consensus 297 ~~~~~~~~~~~i~~~~~sp~g~~l~----~~~~dg~i~iwd~~~~--------~~---~~~l~~h~~~v~~~~~sp~-g~ 360 (475)
+++|+|+|++|+ +++.|+.|+|||+.++ ++ +..+.+|...|.+++|+|+ ++
T Consensus 97 -------------~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 163 (434)
T 2oit_A 97 -------------HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPS 163 (434)
T ss_dssp -------------EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTT
T ss_pred -------------EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCC
Confidence 999999999999 6778999999998754 22 4556779999999999997 89
Q ss_pred EEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccC-------C
Q 011924 361 TFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF-------G 433 (475)
Q Consensus 361 ~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~-------~ 433 (475)
+|++++.||+|++||+++ +..+....+|...|++++|+|+|++|++|+.||.|++||++ +.....+..+. .
T Consensus 164 ~las~s~Dg~v~iwD~~~-~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~ 241 (434)
T 2oit_A 164 MVAVCLADGSIAVLQVTE-TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPV 241 (434)
T ss_dssp EEEEEETTSCEEEEEESS-SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCE
T ss_pred EEEEEECCCeEEEEEcCC-CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCce
Confidence 999999999999999987 45566666788899999999999999999999999999998 55555554432 3
Q ss_pred CeEEEEEcCCCCeEEEE-EecCCc
Q 011924 434 EISGISFSPDTESLFIG-VWDRTY 456 (475)
Q Consensus 434 ~i~~l~fspdg~~l~~~-~~D~~~ 456 (475)
.|.+++|++++.++++. ..|+.+
T Consensus 242 ~v~~v~w~~~~~~l~~~~~~dg~~ 265 (434)
T 2oit_A 242 RVLDVLWIGTYVFAIVYAAADGTL 265 (434)
T ss_dssp EEEEEEEEETTEEEEEEEETTCCS
T ss_pred eEEEEEEecCceEEEEEccCCCcc
Confidence 78999999998877653 455444
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.85 E-value=1e-18 Score=167.96 Aligned_cols=264 Identities=11% Similarity=0.114 Sum_probs=173.9
Q ss_pred ccceeEEecCCCeEEEecC--CeEEEEecC--CCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEE
Q 011924 132 QLRNLVWATSKHDVYLMSH--FSVIHWSSL--TSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAG 205 (475)
Q Consensus 132 ~lr~l~~~~~~~~v~~~~~--~~v~~w~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg 205 (475)
....+.|+++...|++... +.+.+|+.. +++...+..+..+ ..+..+++ ++++|+++
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~s~dg~~l~~~ 101 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-----------------GSLTHISTDHQGQFVFVG 101 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-----------------SCCSEEEECTTSSEEEEE
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-----------------CCCcEEEEcCCCCEEEEE
Confidence 3456678888887888654 789999876 4444333222210 13456666 78877666
Q ss_pred e-cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC-Ceeeee----ee--ccc
Q 011924 206 G-FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQLSKH----FR--FPW 277 (475)
Q Consensus 206 ~-~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~-~~~~~~----~~--~~~ 277 (475)
+ .++.|.+|++............. ....+.+++| +|+|+.+++++..++.|++|++.+ ++.... +. ...
T Consensus 102 ~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~--s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 102 SYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANI--SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp ETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEE--CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred ecCCCeEEEEECCCCcccccccccc-CCCCceEEEE--CCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC
Confidence 5 48999999996222222223333 3345788888 999997555554899999999987 554322 12 223
Q ss_pred cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe-CCCcEEEEECC--CCce--EEEeec----C--
Q 011924 278 PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG-DNPDGLLVDSM--TGKT--IASLCG----H-- 346 (475)
Q Consensus 278 ~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~dg~i~iwd~~--~~~~--~~~l~~----h-- 346 (475)
.+. +++|+|+|+++++++ .++.+.+|++. +++. ...+.. +
T Consensus 179 ~~~-----------------------------~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (343)
T 1ri6_A 179 GPR-----------------------------HMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSD 229 (343)
T ss_dssp CEE-----------------------------EEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred Ccc-----------------------------eEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccc
Confidence 455 899999999776655 78999999995 3443 223321 1
Q ss_pred CCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCC---CceEEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEE--EC
Q 011924 347 LDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNL---SESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVY--DV 419 (475)
Q Consensus 347 ~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~---~~~~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iw--d~ 419 (475)
...+.+++|+|+|++|+++. .++.|.+||+... .+.+..+..+.. +..++|+|+|++|++++ .++.|.+| |.
T Consensus 230 ~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 230 TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred cCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 23567899999998887554 7899999999731 234444554444 88999999999888887 57999999 55
Q ss_pred CCCeeEEE-EeccCCCeEEEEEcCCCC
Q 011924 420 KSGYEKEQ-EIDFFGEISGISFSPDTE 445 (475)
Q Consensus 420 ~~~~~~~~-~~~~~~~i~~l~fspdg~ 445 (475)
.++..... .........+++|.|+.+
T Consensus 309 ~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 309 EQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp TTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred CCceeeEccccccCCCCeeEEEEcccC
Confidence 56643221 112235677888887644
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=5e-19 Score=196.19 Aligned_cols=223 Identities=15% Similarity=0.081 Sum_probs=179.0
Q ss_pred EEEEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeecC-----------CCCceeEEEEEeC-CCCCeEEEEEeCCCeE
Q 011924 192 VSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-----------DNAITNAVEIYGS-PSGAVHFTASNNDCGV 259 (475)
Q Consensus 192 v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~-----------~~~~v~~l~~~~s-~~g~~~l~s~s~dg~v 259 (475)
..+++.+|+.|+++ .++.|++|++.. ... . .... +...+..++| + |+|+. +++++ ++.|
T Consensus 249 ~~~~SpDG~~la~~-~~~~i~~~d~~~-~~l--~-~l~~~~~~~~~~~~~~~~~v~~~~~--S~pdG~~-la~~~-~~~i 319 (1045)
T 1k32_A 249 PRHLNTDGRRILFS-KGGSIYIFNPDT-EKI--E-KIEIGDLESPEDRIISIPSKFAEDF--SPLDGDL-IAFVS-RGQA 319 (1045)
T ss_dssp EEEEEESSSCEEEE-ETTEEEEECTTT-CCE--E-ECCCCCCCBCCSEEEECGGGGEEEE--EECGGGC-EEEEE-TTEE
T ss_pred eeeEcCCCCEEEEE-eCCEEEEecCCc-eEe--e-eeccCcccccccccccccccceeee--cCCCCCE-EEEEE-cCEE
Confidence 34666699988887 589999999843 222 1 2222 2346888999 9 99997 56555 8899
Q ss_pred EEEECCCCeeeeeeeccc-cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEE-EEECCCC
Q 011924 260 RDFDMGKYQLSKHFRFPW-PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGL-LVDSMTG 337 (475)
Q Consensus 260 ~iwd~~~~~~~~~~~~~~-~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~-iwd~~~~ 337 (475)
.+|++..+.......+.. .+. +++|+ +|+.|++++.+..+. +|++.++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~s-dg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 320 FIQDVSGTYVLKVPEPLRIRYV-----------------------------RRGGD-TKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp EEECTTSSBEEECSCCSCEEEE-----------------------------EECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred EEEcCCCCceEEccCCCcceEE-----------------------------eeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence 999998877554333444 566 89999 999999999888888 9998877
Q ss_pred ceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCC-----
Q 011924 338 KTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD----- 412 (475)
Q Consensus 338 ~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg----- 412 (475)
+.. .+.+|...+.+++|+|+|++|++++.++.|++||+.+ ++....+.+|.+.+.+++|||||++|++++.++
T Consensus 370 ~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 370 KAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp CEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred Cce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC-CceEEeccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence 654 4557888999999999999999999999999999976 677777768888899999999999999887654
Q ss_pred -----eEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 413 -----FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 413 -----~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
.|++||+.++. +..+..|...+..++|+|||++|++++.++..
T Consensus 448 ~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~ 495 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLD 495 (1045)
T ss_dssp SCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCC
T ss_pred CCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCC
Confidence 89999999886 66677788889999999999999998876543
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=4.4e-19 Score=171.19 Aligned_cols=216 Identities=11% Similarity=0.101 Sum_probs=161.5
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccc
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW 277 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~ 277 (475)
++.++++++.+++|.+||+.+..... .+.......+..++| +|+|+.+++++..++.|.+||+.+++.+..+....
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~--s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~ 85 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYK--SCVMPDKFGPGTAMM--APDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSS 85 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEE--EEECSSCCSSCEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCC
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEE--EEecCCCCCCceeEE--CCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccc
Confidence 66788999999999999998655432 222222224677888 99998767777788999999999988877665322
Q ss_pred -------cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC------------CcEEEEECCCCc
Q 011924 278 -------PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN------------PDGLLVDSMTGK 338 (475)
Q Consensus 278 -------~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d------------g~i~iwd~~~~~ 338 (475)
.+. +++|+|+|++|++++.+ +.|.+||+.+++
T Consensus 86 ~~~~~~~~~~-----------------------------~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 86 VPGEVGRSMY-----------------------------SFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp STTEEEECSS-----------------------------CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred cccccccccc-----------------------------ceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 134 88999999999998865 899999998754
Q ss_pred ---eEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCC-------------------------
Q 011924 339 ---TIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL------------------------- 390 (475)
Q Consensus 339 ---~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~------------------------- 390 (475)
.+..+. +...+.+++|+|+|+ +++++. .|.+||+.+ ++.+..+..+.
T Consensus 137 ~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (349)
T 1jmx_B 137 EAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKT-GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFS 211 (349)
T ss_dssp GBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTT-CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEE
T ss_pred ccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCC-CceeccccccccCCccccCccceeeecCCCcceeEE
Confidence 334444 344688999999999 555544 499999976 55555543221
Q ss_pred -------------------------------------------CceEEEEEcc-CCCEEEEEcCCCeEEEEECCCCeeEE
Q 011924 391 -------------------------------------------GAIRSIRYTS-DGRYMATAEPADFVHVYDVKSGYEKE 426 (475)
Q Consensus 391 -------------------------------------------~~v~~l~~sp-dg~~la~~~~dg~i~iwd~~~~~~~~ 426 (475)
..+..++|+| +|++|+++ ++.|.+||+.+++.+.
T Consensus 212 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 212 MLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp EEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEE
T ss_pred eeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEE
Confidence 1345678889 99999988 8899999999988776
Q ss_pred EEeccCCCeEEEEEcCCCCeEEEEEecC
Q 011924 427 QEIDFFGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 427 ~~~~~~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
.+. ....+.+++|+|+|++|++++.++
T Consensus 290 ~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 316 (349)
T 1jmx_B 290 AAN-LDHTYYCVAFDKKGDKLYLGGTFN 316 (349)
T ss_dssp EEE-CSSCCCEEEECSSSSCEEEESBSS
T ss_pred EEc-CCCCccceEECCCCCEEEEecCCC
Confidence 655 345678999999999999875554
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=4e-20 Score=197.01 Aligned_cols=220 Identities=12% Similarity=0.080 Sum_probs=164.0
Q ss_pred EEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCC---ceeEEEEEeCCCCCeEEEEEeCC---------C
Q 011924 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA---ITNAVEIYGSPSGAVHFTASNND---------C 257 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~---~v~~l~~~~s~~g~~~l~s~s~d---------g 257 (475)
+.+++| +|+++++ +.+|+|++|++.+.... .+...+.. .+..++| ||+|+. |++++.+ +
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~---~~~~~~~~~~~~v~~~~~--SpDg~~-l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTST---VLIEGKKIESLRAIRYEI--SPDREY-ALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE---EEECTTTTTTTTCSEEEE--CTTSSE-EEEEESCCCCSSSCCCS
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE---EEeccccccccccceEEE--CCCCCE-EEEEecCccceeeccee
Confidence 445666 7786665 78999999999876554 34444443 3889999 999997 6666554 7
Q ss_pred eEEEEECCCCeeeeeee-c---cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEE
Q 011924 258 GVRDFDMGKYQLSKHFR-F---PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVD 333 (475)
Q Consensus 258 ~v~iwd~~~~~~~~~~~-~---~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd 333 (475)
.|++||+.+++. ..+. . ...+. +++|||+|+.|++++. +.|++||
T Consensus 92 ~i~~~d~~~~~~-~~l~~~~~~~~~~~-----------------------------~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 92 YYVLSKIPHGDP-QSLDPPEVSNAKLQ-----------------------------YAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp EEEEEESSSCCC-EECCCTTCCSCCCS-----------------------------BCCBCSSTTCEEEEET-TEEEEES
T ss_pred eEEEEECCCCce-EeccCCcccccccc-----------------------------ccEECCCCCEEEEEEC-CeEEEEE
Confidence 888999998876 2232 1 22255 7899999999999876 7899999
Q ss_pred CCCCceEEEeecCCCCe------------------EEEEEecCCCEEEEEeCCC--------------------------
Q 011924 334 SMTGKTIASLCGHLDFS------------------FASAWHPNGVTFATGNQDK-------------------------- 369 (475)
Q Consensus 334 ~~~~~~~~~l~~h~~~v------------------~~~~~sp~g~~l~t~s~dg-------------------------- 369 (475)
+.+++.......+...+ .+++|+|||++|++++.++
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 99888776665444333 7899999999999987653
Q ss_pred --------eEEEEECCCCCceEEEEecC------CCceEEEEEccCCCEEEEEcC----CCeEEEEECCCCeeEEEEec-
Q 011924 370 --------TCRIWDLRNLSESVAVLKGN------LGAIRSIRYTSDGRYMATAEP----ADFVHVYDVKSGYEKEQEID- 430 (475)
Q Consensus 370 --------~v~iwd~~~~~~~~~~~~~~------~~~v~~l~~spdg~~la~~~~----dg~i~iwd~~~~~~~~~~~~- 430 (475)
+|++||+.. ++....+..+ ...+..++|||||++|++... +..|++||+.++.....+..
T Consensus 221 ~G~~~~~~~l~~~d~~~-~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 299 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNG-PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE 299 (723)
T ss_dssp TTSCCCEEEEEEEESSS-SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCCeeEEEEEECCC-CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec
Confidence 799999976 5544555543 567899999999998877643 35799999999876655543
Q ss_pred cCCCe----EEEEEcCCCCeEEEE
Q 011924 431 FFGEI----SGISFSPDTESLFIG 450 (475)
Q Consensus 431 ~~~~i----~~l~fspdg~~l~~~ 450 (475)
+.+.+ ..++|||||+.|+..
T Consensus 300 ~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 300 SEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp CSSCCCCCCCCCEECTTSCSEEEE
T ss_pred cCCEEeccCCCceEcCCCCeEEEE
Confidence 33444 388999999998875
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=4.8e-18 Score=165.40 Aligned_cols=261 Identities=13% Similarity=0.116 Sum_probs=173.2
Q ss_pred cceeEEecCCCeEEEecC-----CeEEEEecCC--CCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEE
Q 011924 133 LRNLVWATSKHDVYLMSH-----FSVIHWSSLT--SSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAG 205 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~~-----~~v~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg 205 (475)
.+.+.++++...||+.+. +.+..|.... ++...+..... .......+++++++|+++
T Consensus 52 p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~----------------~~~~p~~~~~dg~~l~~~ 115 (361)
T 3scy_A 52 PSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT----------------MGADPCYLTTNGKNIVTA 115 (361)
T ss_dssp CCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC----------------SSSCEEEEEECSSEEEEE
T ss_pred CceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc----------------CCCCcEEEEECCCEEEEE
Confidence 455678888888888766 5888887544 33333322110 112345566688877776
Q ss_pred e-cCceEEEEeCCCCCceEEE--eee-cC--------CCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe-----
Q 011924 206 G-FQGELICKHLDRPGVSFCS--RTT-YD--------DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ----- 268 (475)
Q Consensus 206 ~-~dg~i~vw~~~~~~~~~~~--~~~-~~--------~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~----- 268 (475)
+ .+|.|.+|++...+..... ... .+ +...+.+++| +|+|+.+++++..++.|++|++....
T Consensus 116 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~ 193 (361)
T 3scy_A 116 NYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI--TPDGKYLLADDLGTDQIHKFNINPNANADNK 193 (361)
T ss_dssp ETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE--CTTSSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred ECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE--CCCCCEEEEEeCCCCEEEEEEEcCCCCcccc
Confidence 6 5789999999754422100 011 11 1223467888 99999867777678999999987533
Q ss_pred --ee-------eeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe-CCCcEEEEECCCCc
Q 011924 269 --LS-------KHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG-DNPDGLLVDSMTGK 338 (475)
Q Consensus 269 --~~-------~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~ 338 (475)
+. .......... +++|+|+|+++++++ .++.|.+|++.+++
T Consensus 194 ~~l~~~~~~~~~~~~~~~~~~-----------------------------~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 194 EKFLTKGTPEAFKVAPGSGPR-----------------------------HLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp CCCEEEEEEEEEECCTTCCEE-----------------------------EEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred cceeecccccceecCCCCCCe-----------------------------EEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 11 1111233445 899999999888777 68999999998775
Q ss_pred e--EEEee---cCCCCeEEEEEecCCCEEEEEeCC--CeEEEEECCC-CCc--eEEEEecCCCceEEEEEccCCCEEEEE
Q 011924 339 T--IASLC---GHLDFSFASAWHPNGVTFATGNQD--KTCRIWDLRN-LSE--SVAVLKGNLGAIRSIRYTSDGRYMATA 408 (475)
Q Consensus 339 ~--~~~l~---~h~~~v~~~~~sp~g~~l~t~s~d--g~v~iwd~~~-~~~--~~~~~~~~~~~v~~l~~spdg~~la~~ 408 (475)
. +..+. .+...+.+++|+|+|++|++++.+ ++|.+|++.. .+. .+..+.. ...++.++|+|+|++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~ 323 (361)
T 3scy_A 245 LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVA 323 (361)
T ss_dssp EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEE
T ss_pred eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEE
Confidence 4 33332 233457899999999999777765 8999999962 233 3444444 4567899999999998888
Q ss_pred c-CCCeEEEE--ECCCCeeEEEEe-ccCCCeEEEEEc
Q 011924 409 E-PADFVHVY--DVKSGYEKEQEI-DFFGEISGISFS 441 (475)
Q Consensus 409 ~-~dg~i~iw--d~~~~~~~~~~~-~~~~~i~~l~fs 441 (475)
+ .++.|.+| |..+++...... .+...+.|+.|.
T Consensus 324 ~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 324 CRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp ETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred ECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 7 56899996 445665443321 234678899886
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=1.7e-18 Score=191.86 Aligned_cols=263 Identities=11% Similarity=0.042 Sum_probs=199.7
Q ss_pred ccceeEEe-cCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE-cCcEEEEEecCc
Q 011924 132 QLRNLVWA-TSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-KDKLLVAGGFQG 209 (475)
Q Consensus 132 ~lr~l~~~-~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~lvsg~~dg 209 (475)
....+.|+ ++...|++.....+..|+..++.... +.++ ....+..++| +++.|++++.++
T Consensus 297 ~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~---~~~~---------------~~~~~~~~~~sdg~~l~~~s~~~ 358 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK---VPEP---------------LRIRYVRRGGDTKVAFIHGTREG 358 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE---CSCC---------------SCEEEEEECSSSEEEEEEEETTE
T ss_pred ccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE---ccCC---------------CcceEEeeeEcCCCeEEEEECCC
Confidence 35667788 88888888888899999876554322 1110 1125666666 678888888888
Q ss_pred eEE-EEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCce
Q 011924 210 ELI-CKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCI 287 (475)
Q Consensus 210 ~i~-vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~ 287 (475)
.+. +|++...... .+. .+...+..++| +|+|+. |++++.++.|++||+.+++...... +...+.
T Consensus 359 ~l~~~~d~~~~~~~---~l~-~~~~~~~~~~~--SpDG~~-la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~------- 424 (1045)
T 1k32_A 359 DFLGIYDYRTGKAE---KFE-ENLGNVFAMGV--DRNGKF-AVVANDRFEIMTVDLETGKPTVIERSREAMIT------- 424 (1045)
T ss_dssp EEEEEEETTTCCEE---ECC-CCCCSEEEEEE--CTTSSE-EEEEETTSEEEEEETTTCCEEEEEECSSSCCC-------
T ss_pred ceEEEEECCCCCce---Eec-CCccceeeeEE--CCCCCE-EEEECCCCeEEEEECCCCceEEeccCCCCCcc-------
Confidence 888 8998764432 333 67778899999 999997 7888899999999999988877763 666777
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCC----------cEEEEECCCCceEEEeecCCCCeEEEEEec
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNP----------DGLLVDSMTGKTIASLCGHLDFSFASAWHP 357 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg----------~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp 357 (475)
+++|||+|++|++++.++ .|++||+.+++ +..+..|...+.+++|+|
T Consensus 425 ----------------------~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~sp 481 (1045)
T 1k32_A 425 ----------------------DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDA 481 (1045)
T ss_dssp ----------------------CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECT
T ss_pred ----------------------ceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcC
Confidence 899999999999887644 89999999887 677888888899999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCC------------------------------------------ceEEEEecCCCceEE
Q 011924 358 NGVTFATGNQDKTCRIWDLRNLS------------------------------------------ESVAVLKGNLGAIRS 395 (475)
Q Consensus 358 ~g~~l~t~s~dg~v~iwd~~~~~------------------------------------------~~~~~~~~~~~~v~~ 395 (475)
+|++|++++.++..++|+..... ..+..+..+.+.+..
T Consensus 482 dG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~ 561 (1045)
T 1k32_A 482 DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRM 561 (1045)
T ss_dssp TSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEE
T ss_pred CCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhh
Confidence 99999999988777777643210 112333445577889
Q ss_pred EEEccCCCEEEE-------------EcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEec
Q 011924 396 IRYTSDGRYMAT-------------AEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 396 l~~spdg~~la~-------------~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D 453 (475)
++++|+|+++++ ......|.+||+.++.... +. ..+..++|||||++|++++.|
T Consensus 562 ~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~---~~v~~~~~S~DG~~l~~~~~~ 628 (1045)
T 1k32_A 562 IIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE-VK---NNLTDLRLSADRKTVMVRKDD 628 (1045)
T ss_dssp EEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEE-EE---EEEEEEEECTTSCEEEEEETT
T ss_pred eEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEE-ee---cCcceEEECCCCCEEEEEcCC
Confidence 999999987775 1224578999998886432 22 568899999999999998876
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.83 E-value=1.1e-17 Score=162.81 Aligned_cols=235 Identities=15% Similarity=0.118 Sum_probs=152.4
Q ss_pred EEEE--cCcEEEEEecC----ceEEEEeCCCC-CceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC
Q 011924 194 TLAV--KDKLLVAGGFQ----GELICKHLDRP-GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 194 ~l~~--~~~~lvsg~~d----g~i~vw~~~~~-~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
.+++ ++++|++++.+ |.|.+|+++.. +..........+......+++ +++.++++...++.|.+|++..
T Consensus 54 ~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~----dg~~l~~~~~~~~~v~~~~~~~ 129 (361)
T 3scy_A 54 YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT----NGKNIVTANYSGGSITVFPIGQ 129 (361)
T ss_dssp SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE----CSSEEEEEETTTTEEEEEEBCT
T ss_pred eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE----CCCEEEEEECCCCEEEEEEeCC
Confidence 4555 88889888875 89999998765 322222222323334455554 7777566666789999999975
Q ss_pred Ceeeeee----eccc--cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe-CCCcEEEEECCCCc-
Q 011924 267 YQLSKHF----RFPW--PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG-DNPDGLLVDSMTGK- 338 (475)
Q Consensus 267 ~~~~~~~----~~~~--~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~- 338 (475)
...+... .+.. +.. . . .....+.+++|+|+|+++++++ .++.|.+|++....
T Consensus 130 ~g~~~~~~~~~~~~g~~~~~---~-------------~----~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~ 189 (361)
T 3scy_A 130 DGALLPASDVIEFKGSGPDK---E-------------R----QTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNAN 189 (361)
T ss_dssp TSCBCSCSEEEECCCCCSCT---T-------------T----CSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCC
T ss_pred CCcCcccceeEEccCCCCCc---c-------------c----cCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCC
Confidence 4322211 1111 000 0 0 0000011789999999776665 47899999887433
Q ss_pred ------eE------EEeecCCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCCCce--EEEEec---CCCceEEEEEcc
Q 011924 339 ------TI------ASLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSES--VAVLKG---NLGAIRSIRYTS 400 (475)
Q Consensus 339 ------~~------~~l~~h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~~~~--~~~~~~---~~~~v~~l~~sp 400 (475)
.. .....+...+..++|+|+|+++++++ .+++|.+||+.. +.. +..+.. +...+..++|+|
T Consensus 190 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~sp 268 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSP 268 (361)
T ss_dssp TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECT
T ss_pred cccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECC
Confidence 11 11223455678999999999888877 589999999974 432 222322 224567999999
Q ss_pred CCCEEEEEcCC--CeEEEEECC--CCe--eEEEEeccCCCeEEEEEcCCCCeEEEEEecC
Q 011924 401 DGRYMATAEPA--DFVHVYDVK--SGY--EKEQEIDFFGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 401 dg~~la~~~~d--g~i~iwd~~--~~~--~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
||++|+++..+ +.|.+|++. ++. .+..+.. ...+.+++|+|||++|+++..+.
T Consensus 269 dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 269 DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTT
T ss_pred CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCC
Confidence 99998776654 899999985 444 3333333 45788999999999999988554
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=1.4e-17 Score=159.59 Aligned_cols=260 Identities=12% Similarity=0.017 Sum_probs=188.0
Q ss_pred ecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEE-EEEecCceEEEEeCCCCCceEE
Q 011924 148 MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLL-VAGGFQGELICKHLDRPGVSFC 224 (475)
Q Consensus 148 ~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~l-vsg~~dg~i~vw~~~~~~~~~~ 224 (475)
..++.|..|+..+++....+...+.. ..+..+++ +++.+ +++..++.|.+|++.+.+....
T Consensus 8 ~~~~~v~~~d~~~~~~~~~~~~~~~~----------------~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 8 ARPDKLVVIDTEKMAVDKVITIADAG----------------PTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR 71 (337)
T ss_dssp ETTTEEEEEETTTTEEEEEEECTTCT----------------TCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCCCeEEEEECCCCcEEEEEEcCCCC----------------CCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEee
Confidence 35688999998887665544432100 01234555 77655 5666789999999987664422
Q ss_pred EeeecCC----CCceeEEEEEeCCCCCeEEEEEe------------CCCeEEEEECCCCeeeeeee---ccccEEeccCC
Q 011924 225 SRTTYDD----NAITNAVEIYGSPSGAVHFTASN------------NDCGVRDFDMGKYQLSKHFR---FPWPVNVSSSY 285 (475)
Q Consensus 225 ~~~~~~~----~~~v~~l~~~~s~~g~~~l~s~s------------~dg~v~iwd~~~~~~~~~~~---~~~~v~~s~~~ 285 (475)
+...+ ...+..++| +|+|+. +++++ .++.|.+||+.+++.+..+. .+..+.|+|++
T Consensus 72 --~~~~~~~~~~~~~~~~~~--s~dg~~-l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg 146 (337)
T 1pby_B 72 --IDLSTPEERVKSLFGAAL--SPDGKT-LAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG 146 (337)
T ss_dssp --EECCBTTEEEECTTCEEE--CTTSSE-EEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTS
T ss_pred --EEcCCcccccccccceEE--CCCCCE-EEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCC
Confidence 22121 124567888 999987 55543 57999999999988877766 34567799999
Q ss_pred ceEE----EEEEeecccceEEEEeee---eeeEEECCCCcEEEEEeCCC------------------------cEEEEEC
Q 011924 286 CIIL----LCRLLNFMTEKVIICLLC---LQHSSQSPDGKLLIIVGDNP------------------------DGLLVDS 334 (475)
Q Consensus 286 ~~l~----~~~v~d~~~~~~~~~~~~---i~~~~~sp~g~~l~~~~~dg------------------------~i~iwd~ 334 (475)
..++ .+.+||..+++....... ...+.|+|+|+.+++++..+ .|.+||+
T Consensus 147 ~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 226 (337)
T 1pby_B 147 SKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226 (337)
T ss_dssp SCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred CEEEEeCCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence 8775 488999998887654431 23457899988776554332 4689999
Q ss_pred CCCceE-EEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCe
Q 011924 335 MTGKTI-ASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADF 413 (475)
Q Consensus 335 ~~~~~~-~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~ 413 (475)
.+++.. ..+..+...+.+++|+|+|++++++ ++.|.+||+.+ ++.+..+... ..+.+++|+|+|++|++++.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~-~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~ 302 (337)
T 1pby_B 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK-NASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGD 302 (337)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT-TEEEEEEECS-SCCCEEEECTTSCEEEEESBSSE
T ss_pred CCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC-CcCcceecCC-CceeeEEECCCCCEEEEEcCCCc
Confidence 988764 2344566778899999999999988 68999999976 6666666643 46789999999999999999999
Q ss_pred EEEEECCCCeeEEEEeccC
Q 011924 414 VHVYDVKSGYEKEQEIDFF 432 (475)
Q Consensus 414 i~iwd~~~~~~~~~~~~~~ 432 (475)
|++||+.+++.+..+..+.
T Consensus 303 i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 303 LAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEEEETTTCCEEEEEECGG
T ss_pred EEEEECcCCcEEEEEEcCC
Confidence 9999999998887776543
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.81 E-value=6.9e-17 Score=156.18 Aligned_cols=245 Identities=13% Similarity=0.143 Sum_probs=164.3
Q ss_pred ccceeEEecCCCeEEEecC----CeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEE
Q 011924 132 QLRNLVWATSKHDVYLMSH----FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAG 205 (475)
Q Consensus 132 ~lr~l~~~~~~~~v~~~~~----~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg 205 (475)
....+.++++.. ||.++. +.|..|+..++....+..+.. ....+..+++ ++++|+++
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~----------------~~~~p~~~a~spdg~~l~~~ 103 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA----------------PGTPPAYVAVDEARQLVYSA 103 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEE----------------ESCCCSEEEEETTTTEEEEE
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeec----------------CCCCCEEEEECCCCCEEEEE
Confidence 345566777766 777653 689999986655433322111 1112345555 88888887
Q ss_pred e-cCceEEEEeCCCCCceEEEeeecC---------CCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC-CCeeeee--
Q 011924 206 G-FQGELICKHLDRPGVSFCSRTTYD---------DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG-KYQLSKH-- 272 (475)
Q Consensus 206 ~-~dg~i~vw~~~~~~~~~~~~~~~~---------~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~-~~~~~~~-- 272 (475)
+ .++.|.+|++...+.......... ....+.+++| +|+|+ ++++...++.|++|++. +++....
T Consensus 104 ~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 104 NYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDL--TPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEE--CTTSC-EEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred eCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEE--CCCCc-EEEEeCCCCEEEEEEECCCCcEEEeee
Confidence 7 779999999975443322222211 1224677888 99999 68888888999999998 4543322
Q ss_pred ee--ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEE-eCCCcEEEEECCC--Cce--EEEeec
Q 011924 273 FR--FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIV-GDNPDGLLVDSMT--GKT--IASLCG 345 (475)
Q Consensus 273 ~~--~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~dg~i~iwd~~~--~~~--~~~l~~ 345 (475)
+. ...... .++|+|+|++++++ ..++.+.+|++.. ++. +..+..
T Consensus 181 ~~~~~g~~p~-----------------------------~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 231 (347)
T 3hfq_A 181 LTMEAGFGPR-----------------------------HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT 231 (347)
T ss_dssp EECCTTCCEE-----------------------------EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES
T ss_pred EEcCCCCCCc-----------------------------eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee
Confidence 12 122344 88999999966664 5678999999874 543 233333
Q ss_pred CC------CCeEEEEEecCCCEEE-EEeCCCeEEEEECCCCC--ceEEEEecCCCceEEEEEccCCCEEEEEcCC-CeEE
Q 011924 346 HL------DFSFASAWHPNGVTFA-TGNQDKTCRIWDLRNLS--ESVAVLKGNLGAIRSIRYTSDGRYMATAEPA-DFVH 415 (475)
Q Consensus 346 h~------~~v~~~~~sp~g~~l~-t~s~dg~v~iwd~~~~~--~~~~~~~~~~~~v~~l~~spdg~~la~~~~d-g~i~ 415 (475)
.. ..+..++|+|+|++|+ +...+++|.+|++...+ ..+..+..+...+..++|+|+|++|++++.+ +.|.
T Consensus 232 ~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 232 IPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp SCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred cCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 22 3588999999999874 55568999999996322 3455555555678899999999988888754 8999
Q ss_pred EE--ECCCCeeE
Q 011924 416 VY--DVKSGYEK 425 (475)
Q Consensus 416 iw--d~~~~~~~ 425 (475)
+| |..+|...
T Consensus 312 v~~~d~~tg~l~ 323 (347)
T 3hfq_A 312 LYARDLTSGKLS 323 (347)
T ss_dssp EEEECTTTCCEE
T ss_pred EEEEeCCCCeEE
Confidence 99 55566544
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=1.7e-17 Score=162.80 Aligned_cols=275 Identities=12% Similarity=0.061 Sum_probs=180.0
Q ss_pred ceeEEecCCCeEEEecC--C--eEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEE--EEEEcCcEEEEEec
Q 011924 134 RNLVWATSKHDVYLMSH--F--SVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVS--TLAVKDKLLVAGGF 207 (475)
Q Consensus 134 r~l~~~~~~~~v~~~~~--~--~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~l~~~~~~lvsg~~ 207 (475)
.+..|+++...|++.++ + .|..|+..+++...+....+ ..+. .++.+++.|+.++.
T Consensus 39 ~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~------------------~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 39 YQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRG------------------DNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSC------------------BCSSSCEECTTSSEEEEEET
T ss_pred cCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCC------------------CCccceEEcCCCCEEEEEeC
Confidence 34568888887777654 3 48888887766544322110 1111 34448999999999
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEE---------------------EeCCCeEEEEECCC
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTA---------------------SNNDCGVRDFDMGK 266 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s---------------------~s~dg~v~iwd~~~ 266 (475)
++.|++|++...... .+...+...+....+..+|++..++.. ...+..|.+||+.+
T Consensus 101 ~~~l~~~d~~~g~~~---~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 101 GRNLMRVDLATLEEN---VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp TTEEEEEETTTCCEE---EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred CCeEEEEECCCCcce---eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 999999999876544 233344555555555558999863322 12446788999988
Q ss_pred CeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCC------CcEEEEECCCCce
Q 011924 267 YQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDN------PDGLLVDSMTGKT 339 (475)
Q Consensus 267 ~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~d------g~i~iwd~~~~~~ 339 (475)
++..........+. .++|+| +|+.|+.+... ..|.++|+..+..
T Consensus 178 g~~~~l~~~~~~~~-----------------------------~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 178 GESTVILQENQWLG-----------------------------HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp CCEEEEEEESSCEE-----------------------------EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred CceEEeecCCcccc-----------------------------ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce
Confidence 87665555666667 899999 99999887753 3788888765543
Q ss_pred EEEeecCC--CCeEEEEEecCCCEEEEEeC-C----CeEEEEECCCCCce--EEEEecCCC---ceEEEEEccCCCEEEE
Q 011924 340 IASLCGHL--DFSFASAWHPNGVTFATGNQ-D----KTCRIWDLRNLSES--VAVLKGNLG---AIRSIRYTSDGRYMAT 407 (475)
Q Consensus 340 ~~~l~~h~--~~v~~~~~sp~g~~l~t~s~-d----g~v~iwd~~~~~~~--~~~~~~~~~---~v~~l~~spdg~~la~ 407 (475)
..+..+. ..+..++|+|+|+.|+..+. + ..|.+||+.. ++. +..+.++.. ....++|+|||+.|+.
T Consensus 229 -~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 229 -RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET-LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPV 306 (388)
T ss_dssp -EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT-CCEEEEEEECCEEEEEECTTSSEEEEEECCC--
T ss_pred -EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCC-CceEEEEcCCCceeeeecCCCCeEccCCCccee
Confidence 4454444 35788999999998866543 2 2499999976 442 222222100 0122379999998876
Q ss_pred E---------cCCCeEEEEECCCCeeEEEEeccCC-----------CeEEEEEcCCCCeEEEEEecCCcceEEE
Q 011924 408 A---------EPADFVHVYDVKSGYEKEQEIDFFG-----------EISGISFSPDTESLFIGVWDRTYGSLLE 461 (475)
Q Consensus 408 ~---------~~dg~i~iwd~~~~~~~~~~~~~~~-----------~i~~l~fspdg~~l~~~~~D~~~~~ll~ 461 (475)
. ..+..|++||+.++.. ..+..+.+ .+..++|||||++|+.++.......+..
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 307 DVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp ----------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred EeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 4 4456899999998764 44555555 5788999999999998875433333433
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=5.5e-17 Score=156.35 Aligned_cols=225 Identities=15% Similarity=0.137 Sum_probs=153.5
Q ss_pred cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEE-EEEecCceEEEEeCCCCCceEEE
Q 011924 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLL-VAGGFQGELICKHLDRPGVSFCS 225 (475)
Q Consensus 149 ~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~l-vsg~~dg~i~vw~~~~~~~~~~~ 225 (475)
.++.|.+|+..+++....+...+. ..+..+++ +++++ +++..++.|.+|++.+.+...
T Consensus 19 ~~~~v~~~d~~~~~~~~~~~~~~~-----------------~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~-- 79 (349)
T 1jmx_B 19 YPNNLHVVDVASDTVYKSCVMPDK-----------------FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF-- 79 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSC-----------------CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE--
T ss_pred CCCeEEEEECCCCcEEEEEecCCC-----------------CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE--
Confidence 568899999888766555443210 01234555 77755 556678999999998655432
Q ss_pred eeecCC-----CCceeEEEEEeCCCCCeEEEEEeC------------CCeEEEEECCCCee---eeeeeccccEEeccCC
Q 011924 226 RTTYDD-----NAITNAVEIYGSPSGAVHFTASNN------------DCGVRDFDMGKYQL---SKHFRFPWPVNVSSSY 285 (475)
Q Consensus 226 ~~~~~~-----~~~v~~l~~~~s~~g~~~l~s~s~------------dg~v~iwd~~~~~~---~~~~~~~~~v~~s~~~ 285 (475)
.....+ ...+..++| +|+|+. +++++. ++.|.+||+.+++. +..+..+..+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~--spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~----- 151 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAI--SPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVY----- 151 (349)
T ss_dssp EEESCCSTTEEEECSSCEEE--CTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCC-----
T ss_pred EEEcccccccccccccceEE--CCCCCE-EEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCccc-----
Confidence 222122 223677888 999997 555544 48999999988443 34444444555
Q ss_pred ceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecC-------------------
Q 011924 286 CIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGH------------------- 346 (475)
Q Consensus 286 ~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h------------------- 346 (475)
+++|+|+|+ +++++ +.|.+||+.+++.+..+..+
T Consensus 152 ------------------------~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (349)
T 1jmx_B 152 ------------------------LMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQ 204 (349)
T ss_dssp ------------------------CEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCC
T ss_pred ------------------------ceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCC
Confidence 666777666 44332 23666776666655544322
Q ss_pred -------------------------------------------------CCCeEEEEEec-CCCEEEEEeCCCeEEEEEC
Q 011924 347 -------------------------------------------------LDFSFASAWHP-NGVTFATGNQDKTCRIWDL 376 (475)
Q Consensus 347 -------------------------------------------------~~~v~~~~~sp-~g~~l~t~s~dg~v~iwd~ 376 (475)
...+.+++|+| ++++++++ ++.|.+||+
T Consensus 205 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~ 282 (349)
T 1jmx_B 205 SPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDL 282 (349)
T ss_dssp CTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEET
T ss_pred CcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEEC
Confidence 22456788889 99999988 889999999
Q ss_pred CCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEecc
Q 011924 377 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 431 (475)
Q Consensus 377 ~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~ 431 (475)
.+ ++.+..+... ..+.+++|+|+|++|++++.++.|.+||+.+++.+..+...
T Consensus 283 ~~-~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 283 KQ-RKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp TT-TEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred cc-CeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 76 6666666543 35779999999998888888999999999999887776543
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=3e-19 Score=190.19 Aligned_cols=219 Identities=14% Similarity=0.094 Sum_probs=155.9
Q ss_pred EEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCC---ceeEEEEEeCCCCCeEEEEEeC---------CCeE
Q 011924 194 TLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA---ITNAVEIYGSPSGAVHFTASNN---------DCGV 259 (475)
Q Consensus 194 ~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~---~v~~l~~~~s~~g~~~l~s~s~---------dg~v 259 (475)
+++| ++.+++ .+.+|.|++|++...... .++..+.. .+..++| ||+|+. |++++. ++.|
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--SpDg~~-la~~~~~~~~~~~s~~~~i 92 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSY---TILSNRTMKSVNASNYGL--SPDRQF-VYLESDYSKLWRYSYTATY 92 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEE---EEECHHHHHTTTCSEEEE--CTTSSE-EEEEEEEEECSSSCEEEEE
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEE---EEEccccccccceeeEEE--CCCCCe-EEEEecCceeEEeecceEE
Confidence 3455 665544 456999999999876643 33333322 3788888 999997 555544 6899
Q ss_pred EEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCce
Q 011924 260 RDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT 339 (475)
Q Consensus 260 ~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~ 339 (475)
++||+.+++.+........+. +++|||||+.|+++. ++.|++|++.+++.
T Consensus 93 ~~~d~~~g~~~~~~~l~~~~~-----------------------------~~~~SPDG~~la~~~-~~~i~~~~~~~g~~ 142 (719)
T 1z68_A 93 YIYDLSNGEFVRGNELPRPIQ-----------------------------YLCWSPVGSKLAYVY-QNNIYLKQRPGDPP 142 (719)
T ss_dssp EEEETTTTEECCSSCCCSSBC-----------------------------CEEECSSTTCEEEEE-TTEEEEESSTTSCC
T ss_pred EEEECCCCccccceecCcccc-----------------------------cceECCCCCEEEEEE-CCeEEEEeCCCCCc
Confidence 999999988732122234456 889999999999985 67999999988876
Q ss_pred EEEe-ecCCCCe-----------------EEEEEecCCCEEEEEeCCC--------------------------------
Q 011924 340 IASL-CGHLDFS-----------------FASAWHPNGVTFATGNQDK-------------------------------- 369 (475)
Q Consensus 340 ~~~l-~~h~~~v-----------------~~~~~sp~g~~l~t~s~dg-------------------------------- 369 (475)
.... .++...+ .+++|+|||++||+++.|.
T Consensus 143 ~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~ 222 (719)
T 1z68_A 143 FQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNP 222 (719)
T ss_dssp EECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCC
T ss_pred EEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCC
Confidence 5432 2333322 4899999999999988652
Q ss_pred --eEEEEECCCCCceE--EE------EecCCCceEEEEEccCCCEEEEEcCC----CeEEEEE----CCCCeeEEEE---
Q 011924 370 --TCRIWDLRNLSESV--AV------LKGNLGAIRSIRYTSDGRYMATAEPA----DFVHVYD----VKSGYEKEQE--- 428 (475)
Q Consensus 370 --~v~iwd~~~~~~~~--~~------~~~~~~~v~~l~~spdg~~la~~~~d----g~i~iwd----~~~~~~~~~~--- 428 (475)
+|++||+.. ++.. .. +.++...+..++|||||+++++.... ..|.+|| +.++.....+
T Consensus 223 ~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~ 301 (719)
T 1z68_A 223 VVRIFIIDTTY-PAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHI 301 (719)
T ss_dssp EEEEEEEESSC-HHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEE
T ss_pred eeEEEEEECCC-CCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecc
Confidence 789999975 4432 11 23567788999999999877774432 2588899 8887655444
Q ss_pred -eccCCCeE-----EEEEcCCCCeEEEE
Q 011924 429 -IDFFGEIS-----GISFSPDTESLFIG 450 (475)
Q Consensus 429 -~~~~~~i~-----~l~fspdg~~l~~~ 450 (475)
..|.+.+. .+.|||||+.|+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 302 EESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred cccCCceEccccCCccEECCCCCeEEEE
Confidence 35666666 89999999987764
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=1.1e-16 Score=156.35 Aligned_cols=229 Identities=12% Similarity=0.047 Sum_probs=156.3
Q ss_pred EEEEEE--cCcEEEEEecCceEEEEeCC-CCCceEEEeeecCCCCceeEEEEEeCCCCCeE-EEEEe-------------
Q 011924 192 VSTLAV--KDKLLVAGGFQGELICKHLD-RPGVSFCSRTTYDDNAITNAVEIYGSPSGAVH-FTASN------------- 254 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~dg~i~vw~~~-~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~-l~s~s------------- 254 (475)
+..+++ ++++|++++.+ .|.+|++. ...... ......+ +...++++ +|+|+.+ +++++
T Consensus 42 ~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~~~-g~~~~~~~--spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-EASHPIG-GHPRANDA--DTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-EEEEECC-SSGGGGCT--TSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-eeEeecC-CCCccEEE--CCCCCEEEEEEecCCcceeccceeec
Confidence 345666 88889888877 99999986 433221 1111111 22455777 9999852 44442
Q ss_pred CCCeEEEEECC-CCeeeeeee-----ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC-CC
Q 011924 255 NDCGVRDFDMG-KYQLSKHFR-----FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD-NP 327 (475)
Q Consensus 255 ~dg~v~iwd~~-~~~~~~~~~-----~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~-dg 327 (475)
.++++.+|++. .++....+. ....+. +++|+|+|++|+++.. ++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~-----------------------------~~~~spdG~~l~~~~~~~~ 167 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIH-----------------------------GMVFDPTETYLYSADLTAN 167 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEE-----------------------------EEEECTTSSEEEEEETTTT
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcce-----------------------------EEEECCCCCEEEEEcCCCC
Confidence 68999999997 455543332 233455 8999999998887753 67
Q ss_pred cEEEEECC-CCceE--EEee--cCCCCeEEEEEecCCCEEEEEeC-CCeEEEEECCC-CCceE---EEEec-------CC
Q 011924 328 DGLLVDSM-TGKTI--ASLC--GHLDFSFASAWHPNGVTFATGNQ-DKTCRIWDLRN-LSESV---AVLKG-------NL 390 (475)
Q Consensus 328 ~i~iwd~~-~~~~~--~~l~--~h~~~v~~~~~sp~g~~l~t~s~-dg~v~iwd~~~-~~~~~---~~~~~-------~~ 390 (475)
.|.+|++. +|+.. ..+. .|...+..++|+|+|+++++++. +++|.+|++.. .++.. ..+.. +.
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 89999998 77653 3343 24567899999999999988875 78999998753 23332 22221 12
Q ss_pred C------ceEEEE-EccCCCEEEEEcCC-C-----eEEEEECC-CCeeEEE---EeccCCCeEEEEEcC---CCCeEEEE
Q 011924 391 G------AIRSIR-YTSDGRYMATAEPA-D-----FVHVYDVK-SGYEKEQ---EIDFFGEISGISFSP---DTESLFIG 450 (475)
Q Consensus 391 ~------~v~~l~-~spdg~~la~~~~d-g-----~i~iwd~~-~~~~~~~---~~~~~~~i~~l~fsp---dg~~l~~~ 450 (475)
. .+..++ |+|||++|+++..+ + .|.+|++. ++..... ...+...+..++|+| ||++|+++
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~ 327 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT 327 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEE
Confidence 1 478999 99999998877643 2 89999996 5654431 223445677899999 89999999
Q ss_pred EecC
Q 011924 451 VWDR 454 (475)
Q Consensus 451 ~~D~ 454 (475)
..+.
T Consensus 328 ~~~~ 331 (365)
T 1jof_A 328 DDQE 331 (365)
T ss_dssp CSSS
T ss_pred EcCC
Confidence 8763
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.77 E-value=3.3e-17 Score=174.42 Aligned_cols=294 Identities=6% Similarity=-0.055 Sum_probs=198.5
Q ss_pred ceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEec----
Q 011924 134 RNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF---- 207 (475)
Q Consensus 134 r~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~---- 207 (475)
.++.|+++...++...++.|++|+..+++...++..... ....|.+++| +|++|++++.
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~---------------~~~~~~~~~~SpDg~~la~~~~~~~~ 83 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTM---------------KSVNASNYGLSPDRQFVYLESDYSKL 83 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHH---------------HTTTCSEEEECTTSSEEEEEEEEEEC
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccc---------------cccceeeEEECCCCCeEEEEecCcee
Confidence 355677777555555678999999988887666542210 0012556666 9999998876
Q ss_pred -----CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc------
Q 011924 208 -----QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP------ 276 (475)
Q Consensus 208 -----dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~------ 276 (475)
++.|++|++..........+ ...+..++| ||+|+. |+.++ ++.|++|++.+++........
T Consensus 84 ~~~s~~~~i~~~d~~~g~~~~~~~l----~~~~~~~~~--SPDG~~-la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~ 155 (719)
T 1z68_A 84 WRYSYTATYYIYDLSNGEFVRGNEL----PRPIQYLCW--SPVGSK-LAYVY-QNNIYLKQRPGDPPFQITFNGRENKIF 155 (719)
T ss_dssp SSSCEEEEEEEEETTTTEECCSSCC----CSSBCCEEE--CSSTTC-EEEEE-TTEEEEESSTTSCCEECCCCCBTTTEE
T ss_pred EEeecceEEEEEECCCCccccceec----CcccccceE--CCCCCE-EEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeE
Confidence 78999999986543100011 245778888 999997 66664 789999999887765432111
Q ss_pred ----------------ccEEeccCCceEE----------------------------------------EEEEeecccce
Q 011924 277 ----------------WPVNVSSSYCIIL----------------------------------------LCRLLNFMTEK 300 (475)
Q Consensus 277 ----------------~~v~~s~~~~~l~----------------------------------------~~~v~d~~~~~ 300 (475)
..+.|||+|..|+ .+.+||..+++
T Consensus 156 ~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~ 235 (719)
T 1z68_A 156 NGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPA 235 (719)
T ss_dssp ESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHH
T ss_pred cccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCC
Confidence 3688999998885 34478887765
Q ss_pred EE---E---------EeeeeeeEEECCCCcEEEEEeCC----CcEEEEE----CCCCceEEEe----ecCCCCeE-----
Q 011924 301 VI---I---------CLLCLQHSSQSPDGKLLIIVGDN----PDGLLVD----SMTGKTIASL----CGHLDFSF----- 351 (475)
Q Consensus 301 ~~---~---------~~~~i~~~~~sp~g~~l~~~~~d----g~i~iwd----~~~~~~~~~l----~~h~~~v~----- 351 (475)
.. . ....+..++||||++++++.... ..|.+|| +.+++....+ .+|...+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 236 YVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp HHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCC
T ss_pred ccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCC
Confidence 31 1 11246789999998877775433 2488999 8877765555 46777776
Q ss_pred EEEEecCCCEEEE--EeCCC--eEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCC-----CeEEEEECCC-
Q 011924 352 ASAWHPNGVTFAT--GNQDK--TCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKS- 421 (475)
Q Consensus 352 ~~~~sp~g~~l~t--~s~dg--~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~d-----g~i~iwd~~~- 421 (475)
.++|+|+|+.|+. +..++ .|.+||+.. ++ ...+..+...+..+.++ +|+.|+..+.+ +.+++|.+..
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~-~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~ 392 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTV-EN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIG 392 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCS-TT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECS
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCC-Cc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCC
Confidence 8899999996654 44555 577777754 33 55666666668888888 88877766654 7788887653
Q ss_pred -Ce-eEEEEec----cCCCeEEEEEcCCCCeEEEEEec
Q 011924 422 -GY-EKEQEID----FFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 422 -~~-~~~~~~~----~~~~i~~l~fspdg~~l~~~~~D 453 (475)
+. ....+.. +...+..+.|||+|++|+..+..
T Consensus 393 ~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~ 430 (719)
T 1z68_A 393 SYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYG 430 (719)
T ss_dssp SSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECC
T ss_pred CCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 42 1223322 44678899999999998865443
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=2.9e-17 Score=175.46 Aligned_cols=233 Identities=17% Similarity=0.167 Sum_probs=159.9
Q ss_pred EEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCC-----ceeEEEEEeCCCCCeEEEEEeCC--------
Q 011924 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA-----ITNAVEIYGSPSGAVHFTASNND-------- 256 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~-----~v~~l~~~~s~~g~~~l~s~s~d-------- 256 (475)
..+++| ++.+|+++ +|+|++|++.+.... .++..|.. ..+.+.| ||+|+. ++.++.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--Spdg~~-l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS---VFLENSTFDEFGHSINDYSI--SPDGQF-ILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEE---EEECTTTTTTCCSCCCEEEE--CTTSSE-EEEEEEEEECSSSCE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceE---EEEechhhhhhcccccceEE--CCCCCE-EEEEECCeeeEEEcc
Confidence 446777 77788876 999999999876643 34444432 1233667 999997 6666555
Q ss_pred -CeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECC
Q 011924 257 -CGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSM 335 (475)
Q Consensus 257 -g~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~ 335 (475)
+.+.+||+.+++......++..+. .++|||||+.||.+. ++.|++|++.
T Consensus 91 ~~~~~~~d~~~~~~~~l~~~~~~~~-----------------------------~~~~SPdG~~la~~~-~~~i~~~~~~ 140 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEERIPNNTQ-----------------------------WVTWSPVGHKLAYVW-NNDIYVKIEP 140 (740)
T ss_dssp EEEEEEEETTTTEECCSSCCCTTEE-----------------------------EEEECSSTTCEEEEE-TTEEEEESST
T ss_pred ceEEEEEECCCCcEEEcccCCCcce-----------------------------eeEECCCCCEEEEEE-CCeEEEEECC
Confidence 566799999998765444666777 899999999999884 6789999998
Q ss_pred CCceEEE-eecCCCCe-----------------EEEEEecCCCEEEEEeCCC----------------------------
Q 011924 336 TGKTIAS-LCGHLDFS-----------------FASAWHPNGVTFATGNQDK---------------------------- 369 (475)
Q Consensus 336 ~~~~~~~-l~~h~~~v-----------------~~~~~sp~g~~l~t~s~dg---------------------------- 369 (475)
+++..+. ..++...+ .++.|||||+.||.++.|.
T Consensus 141 ~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~ 220 (740)
T 4a5s_A 141 NLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPK 220 (740)
T ss_dssp TSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCB
T ss_pred CCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCC
Confidence 8875432 12333222 3489999999999886321
Q ss_pred --------eEEEEECCC---CCc-eEEEEec------CCCceEEEEEccCCCEEEEEcC----CCeEEEEECCCCe----
Q 011924 370 --------TCRIWDLRN---LSE-SVAVLKG------NLGAIRSIRYTSDGRYMATAEP----ADFVHVYDVKSGY---- 423 (475)
Q Consensus 370 --------~v~iwd~~~---~~~-~~~~~~~------~~~~v~~l~~spdg~~la~~~~----dg~i~iwd~~~~~---- 423 (475)
+|++||+.. ... ....+.. +...+..++|+|||+.++.... +..|.+||+.++.
T Consensus 221 ~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~ 300 (740)
T 4a5s_A 221 AGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWN 300 (740)
T ss_dssp TTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEE
T ss_pred CcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccc
Confidence 578889864 321 2334432 6667899999999997665533 3479999998886
Q ss_pred eE--EEE--eccCCCeE-----EEEEcCCCCeEE-EEEecCCcceEEEE
Q 011924 424 EK--EQE--IDFFGEIS-----GISFSPDTESLF-IGVWDRTYGSLLEY 462 (475)
Q Consensus 424 ~~--~~~--~~~~~~i~-----~l~fspdg~~l~-~~~~D~~~~~ll~~ 462 (475)
+. ..+ ..+.+.+. .++|||||+.|+ ..+...-...|..+
T Consensus 301 ~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~ 349 (740)
T 4a5s_A 301 CLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYF 349 (740)
T ss_dssp ECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEE
T ss_pred eeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEE
Confidence 21 122 34555544 789999999988 66544333444433
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=8.9e-18 Score=174.44 Aligned_cols=215 Identities=13% Similarity=0.018 Sum_probs=154.3
Q ss_pred CCceeEEEEEeCCCCCeEEEEEeC-CCeEEEEECCCCeeeeeeecc----ccEEeccCCceEEE---------EEEeecc
Q 011924 232 NAITNAVEIYGSPSGAVHFTASNN-DCGVRDFDMGKYQLSKHFRFP----WPVNVSSSYCIILL---------CRLLNFM 297 (475)
Q Consensus 232 ~~~v~~l~~~~s~~g~~~l~s~s~-dg~v~iwd~~~~~~~~~~~~~----~~v~~s~~~~~l~~---------~~v~d~~ 297 (475)
..+|.++++ +|+|+. |++++. ||+++||++.+++..+...+. ..+.|+|+ ..+.. .++|...
T Consensus 21 ~~~~~~~~~--~~DG~~-la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQG--VVDGDK-LLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEE--EETTTE-EEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeec--CCCCCe-EEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 346888988 999997 555554 999999999777665544333 34457877 55531 2444332
Q ss_pred c---ceEEE--EeeeeeeEEECCCCcE-EEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCC---
Q 011924 298 T---EKVII--CLLCLQHSSQSPDGKL-LIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD--- 368 (475)
Q Consensus 298 ~---~~~~~--~~~~i~~~~~sp~g~~-l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~d--- 368 (475)
. +.... ....+...+|+|+|+. +++.+.++.+.+||+.+++.......+ . .+++|+|||++|++++.+
T Consensus 97 ~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 97 TSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp TTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETT
T ss_pred ccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCC
Confidence 2 11111 1113446688888753 333444455669999988765554433 3 789999999999988877
Q ss_pred -CeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCC--eEEEEECCCCeeEEEEeccCCCeEEEE------
Q 011924 369 -KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD--FVHVYDVKSGYEKEQEIDFFGEISGIS------ 439 (475)
Q Consensus 369 -g~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg--~i~iwd~~~~~~~~~~~~~~~~i~~l~------ 439 (475)
++|++||+.. ++ ...+..+.+.+..++|||||++|+++..++ .|++||+.++... .+..+...+..++
T Consensus 174 ~~~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 174 RVSLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEEETTT-CC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEE
T ss_pred CeEEEEEcCCC-CC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccc
Confidence 7899999975 44 446788888899999999999999888888 8999999998777 6666766676677
Q ss_pred --EcCCCCeEEEEEecCCc
Q 011924 440 --FSPDTESLFIGVWDRTY 456 (475)
Q Consensus 440 --fspdg~~l~~~~~D~~~ 456 (475)
|||||..+++++.|+++
T Consensus 251 ~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp EEECTTSCEEEEEEETTEE
T ss_pred eeEcCCCcEEEEEEcCCcE
Confidence 99999777888888765
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=1e-15 Score=149.36 Aligned_cols=221 Identities=9% Similarity=0.055 Sum_probs=149.0
Q ss_pred EEEEEecC--ceEEEEeCCCCCceEE-Eeee-cCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC-CCeeeeeeec
Q 011924 201 LLVAGGFQ--GELICKHLDRPGVSFC-SRTT-YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG-KYQLSKHFRF 275 (475)
Q Consensus 201 ~lvsg~~d--g~i~vw~~~~~~~~~~-~~~~-~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~-~~~~~~~~~~ 275 (475)
.|++|+.. +.|.+|.++....... .... ......+..+++ +|+|+. |++++.+ .|.+|++. ++++.....+
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~--spdg~~-l~~~~~~-~v~~~~~~~~g~~~~~~~~ 79 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTF--DHERKN-IYGAAMK-KWSSFAVKSPTEIVHEASH 79 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEE--CTTSSE-EEEEEBT-EEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEE--CCCCCE-EEEEccc-eEEEEEECCCCCEEEeeEe
Confidence 45666653 5788888754332221 1111 123345678888 999986 6666666 99999997 7766543332
Q ss_pred c--ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcE--EEEEe-------------CCCcEEEEECC-CC
Q 011924 276 P--WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKL--LIIVG-------------DNPDGLLVDSM-TG 337 (475)
Q Consensus 276 ~--~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~--l~~~~-------------~dg~i~iwd~~-~~ 337 (475)
. .... +++|+|+|+. ++++. .++.+.+|++. .|
T Consensus 80 ~~~g~~~-----------------------------~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g 130 (365)
T 1jof_A 80 PIGGHPR-----------------------------ANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG 130 (365)
T ss_dssp ECCSSGG-----------------------------GGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC
T ss_pred ecCCCCc-----------------------------cEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCC
Confidence 1 2233 6789999995 44442 68899999997 56
Q ss_pred ceEEEee----cCCCCeEEEEEecCCCEEEEEeC-CCeEEEEECCCCCce--EEEEe--cCCCceEEEEEccCCCEEEEE
Q 011924 338 KTIASLC----GHLDFSFASAWHPNGVTFATGNQ-DKTCRIWDLRNLSES--VAVLK--GNLGAIRSIRYTSDGRYMATA 408 (475)
Q Consensus 338 ~~~~~l~----~h~~~v~~~~~sp~g~~l~t~s~-dg~v~iwd~~~~~~~--~~~~~--~~~~~v~~l~~spdg~~la~~ 408 (475)
+....+. .+...+.+++|+|+|+++++++. +++|++||+...++. +..+. .+...++.++|+|+|++|+++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~ 210 (365)
T 1jof_A 131 KLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYAL 210 (365)
T ss_dssp CEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred cCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEE
Confidence 6554443 24567999999999998887764 679999999722443 23333 234568999999999998877
Q ss_pred cC-CCeEEEEECC--CCeeEE---EEecc-------CC------CeEEEE-EcCCCCeEEEEEecC
Q 011924 409 EP-ADFVHVYDVK--SGYEKE---QEIDF-------FG------EISGIS-FSPDTESLFIGVWDR 454 (475)
Q Consensus 409 ~~-dg~i~iwd~~--~~~~~~---~~~~~-------~~------~i~~l~-fspdg~~l~~~~~D~ 454 (475)
+. ++.|.+|++. ++.... .+... .+ .+.+++ |||||++|+++..+.
T Consensus 211 ~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 211 MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred ECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 64 6899999865 565421 22211 11 488999 999999998876544
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=2.6e-15 Score=146.18 Aligned_cols=270 Identities=10% Similarity=-0.057 Sum_probs=179.0
Q ss_pred CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEe----------cCceEEEEeCC
Q 011924 150 HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGG----------FQGELICKHLD 217 (475)
Q Consensus 150 ~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~----------~dg~i~vw~~~ 217 (475)
++.+..|+..+++....+... ..+ .+++ ++++|+++. .++.|.+||+.
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g------------------~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTA------------------FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECC------------------EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred cCeEEEEECCCCeEEEEecCC------------------CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 468899998777654332210 112 4555 899998876 36789999988
Q ss_pred CCCceEEEeeecC---CCCceeEEEEEeCCCCCeEEEEEeC-CCeEEEEECCCCeeeee-eecccc--EEeccCCce-EE
Q 011924 218 RPGVSFCSRTTYD---DNAITNAVEIYGSPSGAVHFTASNN-DCGVRDFDMGKYQLSKH-FRFPWP--VNVSSSYCI-IL 289 (475)
Q Consensus 218 ~~~~~~~~~~~~~---~~~~v~~l~~~~s~~g~~~l~s~s~-dg~v~iwd~~~~~~~~~-~~~~~~--v~~s~~~~~-l~ 289 (475)
+.+.......... +......+++ +|+|++++++... +++|.+||+.+++.+.. +..... +.+.|.+.. +.
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~--spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQ--TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFM 167 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEE--CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEE
T ss_pred CCcEEEEEEcCccccccCCCcceEEE--CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEE
Confidence 6665433322211 1233566778 9999985555433 68999999999988877 553322 334443311 11
Q ss_pred ------EEEEeeccc-ceEEEEee---------eeeeEEECCCCcEEEEEeCCCcEEEEECCCCce--EEEeec------
Q 011924 290 ------LCRLLNFMT-EKVIICLL---------CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT--IASLCG------ 345 (475)
Q Consensus 290 ------~~~v~d~~~-~~~~~~~~---------~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~--~~~l~~------ 345 (475)
.+.+++... ++...... ....+.++|++..++..+.++.+.++|+..+.. +..+..
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 123344432 33321111 001223456777778788889999999875542 222211
Q ss_pred CC----CCeEEEEEecCCCEEEEEeC-----------CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcC
Q 011924 346 HL----DFSFASAWHPNGVTFATGNQ-----------DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEP 410 (475)
Q Consensus 346 h~----~~v~~~~~sp~g~~l~t~s~-----------dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~ 410 (475)
+. .....++|+|+++.++++.. ..+|.+||+.+ .+.+..+..+. +.+++|+|+|++|++++.
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCCCEEEEeCC
Confidence 00 11223789999888877653 35899999977 78888888776 889999999999999887
Q ss_pred CCeEEEEECCCC--eeEEEEeccCCCeEEEEEcCCCC
Q 011924 411 ADFVHVYDVKSG--YEKEQEIDFFGEISGISFSPDTE 445 (475)
Q Consensus 411 dg~i~iwd~~~~--~~~~~~~~~~~~i~~l~fspdg~ 445 (475)
+.|.+||+.++ +.+..+.........++|+|+|+
T Consensus 325 -~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 325 -GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp -SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred -CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999999999 88888767778889999999986
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=5.6e-16 Score=152.09 Aligned_cols=275 Identities=13% Similarity=0.066 Sum_probs=173.6
Q ss_pred ceeEEecCCCeEEEecC----CeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCc
Q 011924 134 RNLVWATSKHDVYLMSH----FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQG 209 (475)
Q Consensus 134 r~l~~~~~~~~v~~~~~----~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg 209 (475)
..+.|++++..|++... ..+++|+..+++...+....+ .......++.+++.|+.++.++
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~----------------~~~~~~~~spdg~~l~~~~~~~ 102 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKG----------------DNTFGGFISTDERAFFYVKNEL 102 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSC----------------BCTTTCEECTTSSEEEEEETTT
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCC----------------CccccceECCCCCEEEEEEcCC
Confidence 44557788877777543 368888876665433211100 0000012334899999999999
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeE---EE--------------EEeCCCCCeEEEEE----eCCCeEEEEECCCCe
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNA---VE--------------IYGSPSGAVHFTAS----NNDCGVRDFDMGKYQ 268 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~---l~--------------~~~s~~g~~~l~s~----s~dg~v~iwd~~~~~ 268 (475)
.|++|++...... .+...+...... |. ..++|+++.+++.. ..+..|.+||+.+++
T Consensus 103 ~l~~~d~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 103 NLMKVDLETLEEQ---VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp EEEEEETTTCCEE---EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred cEEEEECCCCCcE---EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 9999999865533 222222222111 11 11267776532222 456688889988877
Q ss_pred eeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCC------CcEEEEECCCCceEE
Q 011924 269 LSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDN------PDGLLVDSMTGKTIA 341 (475)
Q Consensus 269 ~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~d------g~i~iwd~~~~~~~~ 341 (475)
..........+. .+.|+| +++.|+.++.+ ..|.+|++..++..
T Consensus 180 ~~~~~~~~~~~~-----------------------------~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~- 229 (396)
T 3c5m_A 180 LEVIHQDTAWLG-----------------------------HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR- 229 (396)
T ss_dssp EEEEEEESSCEE-----------------------------EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-
T ss_pred EEeeccCCcccc-----------------------------cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-
Confidence 665555555666 889999 88877776543 36889998765533
Q ss_pred EeecCC--CCeEEEEEecCCCEEEEEeCC-----CeEEEEECCCCCceEEEEecCCCceEEEEEcc-CCCEEEEEc----
Q 011924 342 SLCGHL--DFSFASAWHPNGVTFATGNQD-----KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTS-DGRYMATAE---- 409 (475)
Q Consensus 342 ~l~~h~--~~v~~~~~sp~g~~l~t~s~d-----g~v~iwd~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~la~~~---- 409 (475)
.+..+. ..+..++|+|+|++|+.++.+ +.|.+||+.+ ++...... .. ... +.|+| +|++|++++
T Consensus 230 ~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 230 KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET-LENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT-CCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC-
T ss_pred EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC-CCeEEeee-CC-CCC-CCccCCCCceEEEecCCcc
Confidence 343332 357889999999988877654 4599999976 44333222 22 233 89999 999888754
Q ss_pred ------------CCCeEEEEECCCCeeEEEEeccCC-----------CeEEEEEcCCCCeEEEEEecCCcceEEEE
Q 011924 410 ------------PADFVHVYDVKSGYEKEQEIDFFG-----------EISGISFSPDTESLFIGVWDRTYGSLLEY 462 (475)
Q Consensus 410 ------------~dg~i~iwd~~~~~~~~~~~~~~~-----------~i~~l~fspdg~~l~~~~~D~~~~~ll~~ 462 (475)
.+..|++||+.++.. ..+..+.. .+..++|+|||++|+.++.+.....+...
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp ---------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred eeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 346899999988764 34444443 25678999999999988765443344444
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=3.8e-15 Score=143.09 Aligned_cols=231 Identities=14% Similarity=0.098 Sum_probs=168.3
Q ss_pred eeEEEEEE--cCcEEEEEecC------------------------ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeC
Q 011924 190 TQVSTLAV--KDKLLVAGGFQ------------------------GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGS 243 (475)
Q Consensus 190 ~~v~~l~~--~~~~lvsg~~d------------------------g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s 243 (475)
..+.++++ +|+++++...+ +.|.+|+..+.... ......+-.....+++ +
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~p~gia~--d 99 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--QSSGKNLFYLPHGLSI--D 99 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--EEECTTTCSSEEEEEE--C
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--eccCCCccCCceEEEE--C
Confidence 46888888 78888887766 47999998765543 2222234446788888 9
Q ss_pred CCCCeEEEEEeCCCeEEEEECCCCe-eeeeeec----------cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEE
Q 011924 244 PSGAVHFTASNNDCGVRDFDMGKYQ-LSKHFRF----------PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSS 312 (475)
Q Consensus 244 ~~g~~~l~s~s~dg~v~iwd~~~~~-~~~~~~~----------~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~ 312 (475)
|+|+ ++++.+.++.|++|+..... .+..+.. ..... .++
T Consensus 100 ~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~-----------------------------~ia 149 (329)
T 3fvz_A 100 TDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT-----------------------------DVA 149 (329)
T ss_dssp TTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE-----------------------------EEE
T ss_pred CCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc-----------------------------EEE
Confidence 9998 58888889999999986542 3444421 11233 899
Q ss_pred ECC-CCcEEEEEe-CCCcEEEEECCCCceEEEeec----------CCCCeEEEEEecC-CCEEEEEeCCCeEEEEECCCC
Q 011924 313 QSP-DGKLLIIVG-DNPDGLLVDSMTGKTIASLCG----------HLDFSFASAWHPN-GVTFATGNQDKTCRIWDLRNL 379 (475)
Q Consensus 313 ~sp-~g~~l~~~~-~dg~i~iwd~~~~~~~~~l~~----------h~~~v~~~~~sp~-g~~l~t~s~dg~v~iwd~~~~ 379 (475)
++| +|.++++.+ .++.|++|+ .+|+.+..+.. +......++++|+ ++++++...+++|++||..+
T Consensus 150 ~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~- 227 (329)
T 3fvz_A 150 VEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT- 227 (329)
T ss_dssp ECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-
T ss_pred EeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-
Confidence 999 888888886 689999999 56877777642 2234889999998 77778888899999999975
Q ss_pred CceEEEEe--cCCCceEEEEEccCCCEEEEE-------cCCCeEEEEECCCCeeEEEEe---ccCCCeEEEEEcCCCCeE
Q 011924 380 SESVAVLK--GNLGAIRSIRYTSDGRYMATA-------EPADFVHVYDVKSGYEKEQEI---DFFGEISGISFSPDTESL 447 (475)
Q Consensus 380 ~~~~~~~~--~~~~~v~~l~~spdg~~la~~-------~~dg~i~iwd~~~~~~~~~~~---~~~~~i~~l~fspdg~~l 447 (475)
++.+..+. .+...+..++|+| |..+++. ..+..|++|++.++..+..+. .+...+.+++++|+|..+
T Consensus 228 G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred CcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 67777774 3456788999999 4333333 344589999999998887763 466789999999999555
Q ss_pred EEEEecCCcc
Q 011924 448 FIGVWDRTYG 457 (475)
Q Consensus 448 ~~~~~D~~~~ 457 (475)
++...++++.
T Consensus 307 vad~~~~~I~ 316 (329)
T 3fvz_A 307 IGDAHTNTVW 316 (329)
T ss_dssp EEESSSCCEE
T ss_pred EEECCCCEEE
Confidence 5555555553
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=2e-14 Score=134.93 Aligned_cols=227 Identities=11% Similarity=0.168 Sum_probs=162.0
Q ss_pred eEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeee---cCCCCceeEEEEEeC-CCCCeEEEEEeC-CCeEEEEE
Q 011924 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTT---YDDNAITNAVEIYGS-PSGAVHFTASNN-DCGVRDFD 263 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~---~~~~~~v~~l~~~~s-~~g~~~l~s~s~-dg~v~iwd 263 (475)
...++++ +++++++...++.|.+|+.. .......... ..+...+..+++ . +++. ++++... ++.|++|+
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~--~~~~g~-l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAV--VRNSGD-IIVTERSPTHQIQIYN 106 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEE--ETTTTE-EEEEECGGGCEEEEEC
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEE--EcCCCe-EEEEcCCCCCEEEEEC
Confidence 4567777 67888888889999999976 3322111110 122345677777 5 5554 4555533 88999999
Q ss_pred CCCCeeeeeeec--cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEE
Q 011924 264 MGKYQLSKHFRF--PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIA 341 (475)
Q Consensus 264 ~~~~~~~~~~~~--~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~ 341 (475)
.+++.+..+.. ...+. +++++|+|+++++...++.|.+||. .++.+.
T Consensus 107 -~~g~~~~~~~~~~~~~~~-----------------------------~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~ 155 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPR-----------------------------GVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLH 155 (286)
T ss_dssp -TTSCEEEEECTTTCSCEE-----------------------------EEEECTTSCEEEEETTTTEEEEECT-TSCEEE
T ss_pred -CCCcEEEEecCccCCCce-----------------------------EEEEeCCCCEEEEECCCCEEEEEcC-CCCEEE
Confidence 56666665542 23455 8999999998887777889999995 466666
Q ss_pred Eee--cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecC--CCceEEEEEccCCCEEEEEcCCC-eEEE
Q 011924 342 SLC--GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN--LGAIRSIRYTSDGRYMATAEPAD-FVHV 416 (475)
Q Consensus 342 ~l~--~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~--~~~v~~l~~spdg~~la~~~~dg-~i~i 416 (475)
.+. ++...+.+++++|+|+++++...++.|++||.. +..+..+... ...+..++++|+|+++++...++ .|.+
T Consensus 156 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~ 233 (286)
T 1q7f_A 156 KFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTI 233 (286)
T ss_dssp EEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEE
T ss_pred EeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC--CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEE
Confidence 664 355678999999999988888889999999984 4566666543 35788999999999888888776 9999
Q ss_pred EECCCCeeEEEEeccC--CCeEEEEEcCCCCeEEEEEecCCc
Q 011924 417 YDVKSGYEKEQEIDFF--GEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 417 wd~~~~~~~~~~~~~~--~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
||. ++..+..+..+. ..+.+++|+|+|+.+++ ..|+++
T Consensus 234 ~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v 273 (286)
T 1q7f_A 234 FTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRL 273 (286)
T ss_dssp ECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEE
T ss_pred ECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeE
Confidence 995 566666665443 34789999999975555 666544
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=1.1e-14 Score=155.41 Aligned_cols=298 Identities=9% Similarity=-0.017 Sum_probs=192.0
Q ss_pred cceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeE--EEEEEcCcEEEEEecC--
Q 011924 133 LRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV--STLAVKDKLLVAGGFQ-- 208 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~l~~~~~~lvsg~~d-- 208 (475)
..++.|.++...++.. ++.|++|+..+++...++.... .. . ..... .+++.+|++|+.++.+
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~--~~----------~-~~~~~~~~~~Spdg~~l~~~~~~~~ 84 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENST--FD----------E-FGHSINDYSISPDGQFILLEYNYVK 84 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTT--TT----------T-CCSCCCEEEECTTSSEEEEEEEEEE
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechh--hh----------h-hcccccceEECCCCCEEEEEECCee
Confidence 3466788887655554 8999999999988766644321 00 0 01122 2344499999988875
Q ss_pred -------ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee--c----
Q 011924 209 -------GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR--F---- 275 (475)
Q Consensus 209 -------g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~---- 275 (475)
+.+.+||+.+.... .+..+.+.+...+| ||+|+. |+.+ .++.|++|++.+++..+... .
T Consensus 85 ~~r~~~~~~~~~~d~~~~~~~----~l~~~~~~~~~~~~--SPdG~~-la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~ 156 (740)
T 4a5s_A 85 QWRHSYTASYDIYDLNKRQLI----TEERIPNNTQWVTW--SPVGHK-LAYV-WNNDIYVKIEPNLPSYRITWTGKEDII 156 (740)
T ss_dssp CSSSCEEEEEEEEETTTTEEC----CSSCCCTTEEEEEE--CSSTTC-EEEE-ETTEEEEESSTTSCCEECCSCCBTTTE
T ss_pred eEEEccceEEEEEECCCCcEE----EcccCCCcceeeEE--CCCCCE-EEEE-ECCeEEEEECCCCceEEEcCCCCccce
Confidence 67789999875422 34455667888989 999998 5655 47899999998876544221 1
Q ss_pred ----------------cccEEeccCCceEEE------------------------------------------EEEeecc
Q 011924 276 ----------------PWPVNVSSSYCIILL------------------------------------------CRLLNFM 297 (475)
Q Consensus 276 ----------------~~~v~~s~~~~~l~~------------------------------------------~~v~d~~ 297 (475)
...+.|||+|..|+. +.+||..
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~ 236 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD 236 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT
T ss_pred ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC
Confidence 123679999987752 4567887
Q ss_pred c---c---eEEEEe---------eeeeeEEECCCCcEEEEEeC----CCcEEEEECCCCc----e--EEEe--ecCCCCe
Q 011924 298 T---E---KVIICL---------LCLQHSSQSPDGKLLIIVGD----NPDGLLVDSMTGK----T--IASL--CGHLDFS 350 (475)
Q Consensus 298 ~---~---~~~~~~---------~~i~~~~~sp~g~~l~~~~~----dg~i~iwd~~~~~----~--~~~l--~~h~~~v 350 (475)
+ + +..... ..+..++|+|||++++.... +..|.+||+.+|+ + +..+ .+|...+
T Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v 316 (740)
T 4a5s_A 237 SLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWV 316 (740)
T ss_dssp SCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCS
T ss_pred CCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceE
Confidence 7 6 333221 14678999999997776543 2369999999887 2 1222 4566655
Q ss_pred E-----EEEEecCCCEEE-EEeC-C--CeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCC-----C--eE
Q 011924 351 F-----ASAWHPNGVTFA-TGNQ-D--KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA-----D--FV 414 (475)
Q Consensus 351 ~-----~~~~sp~g~~l~-t~s~-d--g~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~d-----g--~i 414 (475)
. .++|+|||+.|+ ..+. + ..|.+||+.. +. ...+......|..+.. ++++.|+..+.. + .|
T Consensus 317 ~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~-~~-~~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~l 393 (740)
T 4a5s_A 317 GRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK-KD-CTFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNL 393 (740)
T ss_dssp SSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC-SS-CEESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEE
T ss_pred ccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCC-Cc-eEecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEE
Confidence 4 789999999877 6654 3 3688888864 33 4455544555665542 456655544332 3 44
Q ss_pred EEEECCCCeeEEEEec----cCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 415 HVYDVKSGYEKEQEID----FFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 415 ~iwd~~~~~~~~~~~~----~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
...++..+.....+.. .......+.|||+|++++.......
T Consensus 394 y~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~ 438 (740)
T 4a5s_A 394 YKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG 438 (740)
T ss_dssp EEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS
T ss_pred EEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC
Confidence 5555554433223332 2356889999999999887765543
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=1.5e-15 Score=160.09 Aligned_cols=229 Identities=10% Similarity=-0.007 Sum_probs=154.7
Q ss_pred eeEEEEEEcCcEEEE--E--ecCceEEEEeCCCCCceEEEeeecCCCCcee---------EEEEEeCCCCCe-EEEEEeC
Q 011924 190 TQVSTLAVKDKLLVA--G--GFQGELICKHLDRPGVSFCSRTTYDDNAITN---------AVEIYGSPSGAV-HFTASNN 255 (475)
Q Consensus 190 ~~v~~l~~~~~~lvs--g--~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~---------~l~~~~s~~g~~-~l~s~s~ 255 (475)
..|..++++++.++. + +.++...+|.....+.. ..+..+...+. ...|..||+|+. ++++...
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAE---ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCE---EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCc---ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC
Confidence 367788885554443 3 34788999986433332 22333333444 444532499997 5555545
Q ss_pred CCeEEEEECC--C-Ceeeeeee-----ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC-
Q 011924 256 DCGVRDFDMG--K-YQLSKHFR-----FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN- 326 (475)
Q Consensus 256 dg~v~iwd~~--~-~~~~~~~~-----~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d- 326 (475)
+..|.++++. . +....... +...+. +++|||||+.|++++.+
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~-----------------------------~~~~spDg~~l~~~~~~~ 151 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWA-----------------------------DPVLLPERGEVWCMAEEF 151 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEE-----------------------------EEEEETTTTEEEEEEEEE
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCcccc-----------------------------CcEECCCCCEEEEEEecc
Confidence 6677777775 3 43322222 233455 88999999999998876
Q ss_pred ---------CcEEEEECCC------CceEEEee-cCCCCeEEEEEecCCCEEEEEeCC--------CeEEEEECCCCC--
Q 011924 327 ---------PDGLLVDSMT------GKTIASLC-GHLDFSFASAWHPNGVTFATGNQD--------KTCRIWDLRNLS-- 380 (475)
Q Consensus 327 ---------g~i~iwd~~~------~~~~~~l~-~h~~~v~~~~~sp~g~~l~t~s~d--------g~v~iwd~~~~~-- 380 (475)
..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.+ ..|.+||+...+
T Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 152 TGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp CSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred cCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence 5899999987 544 4565 666788889999999999988755 379999997324
Q ss_pred -ceEEEEecCCCceEEEEEccCCCEEEEEcCCC--eEEEEECCCCeeEEEEeccCCC---------eEEEEEcCCCCeEE
Q 011924 381 -ESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD--FVHVYDVKSGYEKEQEIDFFGE---------ISGISFSPDTESLF 448 (475)
Q Consensus 381 -~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg--~i~iwd~~~~~~~~~~~~~~~~---------i~~l~fspdg~~l~ 448 (475)
.......++...+..++|+|||++++++..++ .|.+||+.++... .+..+... +..++|+|++++++
T Consensus 231 ~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 231 ADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT-QLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE-ESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred cccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee-ecccccccccCccccccCceEeEeCCCEEEE
Confidence 34444444567899999999999888888787 6777777666543 33332221 56789999999888
Q ss_pred EEEe
Q 011924 449 IGVW 452 (475)
Q Consensus 449 ~~~~ 452 (475)
++..
T Consensus 310 ~~~~ 313 (662)
T 3azo_A 310 VHGK 313 (662)
T ss_dssp EEBS
T ss_pred EEEc
Confidence 8765
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=2.3e-14 Score=135.28 Aligned_cols=225 Identities=14% Similarity=0.082 Sum_probs=160.5
Q ss_pred EEEEEE--cCc-EEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe
Q 011924 192 VSTLAV--KDK-LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (475)
Q Consensus 192 v~~l~~--~~~-~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~ 268 (475)
..+++| +++ +++++..++.|..|+.... . ..+..+...+.++++ +|+|+. +++...++.|.+||..+++
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~---~~~~~~~~~~~~l~~--~~dg~l-~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L---SPEMHPSHHQNGHCL--NKQGHL-IACSHGLRRLERQREPGGE 101 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E---EEEESSCSSEEEEEE--CTTCCE-EEEETTTTEEEEECSTTCC
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e---EEEECCCCCcceeeE--CCCCcE-EEEecCCCeEEEEcCCCCc
Confidence 446666 676 7888889999999998764 2 223345566888888 999984 6666667899999998777
Q ss_pred eeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEE----e-------------CCCcEEE
Q 011924 269 LSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIV----G-------------DNPDGLL 331 (475)
Q Consensus 269 ~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~----~-------------~dg~i~i 331 (475)
............+ ..+..++++|+|+++++. + ..+.|..
T Consensus 102 ~~~~~~~~~~~~~------------------------~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~ 157 (296)
T 3e5z_A 102 WESIADSFEGKKL------------------------NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFR 157 (296)
T ss_dssp EEEEECEETTEEC------------------------CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred EEEEeeccCCCCC------------------------CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEE
Confidence 5433321111110 011178999999988873 2 1345666
Q ss_pred EECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCce---EEEEecCCCceEEEEEccCCCEEEEE
Q 011924 332 VDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES---VAVLKGNLGAIRSIRYTSDGRYMATA 408 (475)
Q Consensus 332 wd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~---~~~~~~~~~~v~~l~~spdg~~la~~ 408 (475)
++.. ++ +..+..+......++|+|+++.+++.+.++.|.+||+...+.. ...+..+.+.+.+++++++|+++++.
T Consensus 158 ~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 158 LAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp ECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred ECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc
Confidence 6654 44 4455566777899999999998877777899999999632443 23333345567789999999976666
Q ss_pred cCCCeEEEEECCCCeeEEEEeccCCCeEEEEE-cCCCCeEEEEEecC
Q 011924 409 EPADFVHVYDVKSGYEKEQEIDFFGEISGISF-SPDTESLFIGVWDR 454 (475)
Q Consensus 409 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~f-spdg~~l~~~~~D~ 454 (475)
++.|.+||.. ++.+..+..+.+ +.+++| +|+++.|++++.++
T Consensus 236 --~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 236 --GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp --TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred --CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 7889999976 777777776666 999999 68999999998763
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=4.8e-14 Score=135.94 Aligned_cols=220 Identities=11% Similarity=0.055 Sum_probs=144.7
Q ss_pred EEEEEE--cCcEEEEEecC---c--eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeC---------
Q 011924 192 VSTLAV--KDKLLVAGGFQ---G--ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN--------- 255 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~d---g--~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~--------- 255 (475)
+..++| +|+.|+.++.+ + .|.+|++...... .+...+ . +..+.| +|+|+.+++++..
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~---~l~~~~-~-~~~~~w--spdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK---KILEAK-N-IRSLEW--NEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE---EEEEES-E-EEEEEE--CTTSSEEEEEEECCCC------
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE---EEEcCC-C-ccceeE--CCCCCEEEEEEccCCCcCCcEE
Confidence 455666 88888877654 3 4777777654322 222222 2 788888 9999974544432
Q ss_pred -----------------CCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCc
Q 011924 256 -----------------DCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGK 318 (475)
Q Consensus 256 -----------------dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~ 318 (475)
...|.+|++.+++.+..+..+ .+. .++|+|+|
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~-----------------------------~~~~spdg- 182 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFS-----------------------------SGIWHRDK- 182 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTC-----------------------------EEEEETTE-
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecCC-Ccc-----------------------------cccCCCCe-
Confidence 245777777766653333222 344 88999999
Q ss_pred EEEEEeCCC-------cEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCC--------CeEEEEECCCCCceE
Q 011924 319 LLIIVGDNP-------DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD--------KTCRIWDLRNLSESV 383 (475)
Q Consensus 319 ~l~~~~~dg-------~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~d--------g~v~iwd~~~~~~~~ 383 (475)
+++++..+. ...||.+.+++ ...+..+ ..+..+ +|+|++|+.++.+ ..|.+|| . ++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~ 255 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVM 255 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEE
T ss_pred EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-CceE
Confidence 777765432 33444333554 4445444 555544 9999999887754 3678888 3 4544
Q ss_pred EEEecCCCceEE-EEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcceEEEE
Q 011924 384 AVLKGNLGAIRS-IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEY 462 (475)
Q Consensus 384 ~~~~~~~~~v~~-l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~~ll~~ 462 (475)
.....+...+.. +.|+ +| ++++++.++.++|| +.++.. ..+..+.+.|.+++|+| ..+++++.+++...+..+
T Consensus 256 ~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 256 GILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp ESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred eccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 444455667876 9999 98 88999999999999 876654 44555678899999999 677788878777666655
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=3.1e-14 Score=137.31 Aligned_cols=214 Identities=13% Similarity=0.079 Sum_probs=146.8
Q ss_pred eEEEEEEcCcEEEEEe---------cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC--C--
Q 011924 191 QVSTLAVKDKLLVAGG---------FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND--C-- 257 (475)
Q Consensus 191 ~v~~l~~~~~~lvsg~---------~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d--g-- 257 (475)
.+...+++|+.++... .++.|.+|++...... .+ ..+..+.| ||+|+.++++.... +
T Consensus 16 ~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l-----~~~~~~~~--SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 16 YLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARR---FI-----ENATMPRI--SPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE-----ESCEEEEE--CTTSSEEEEEEEETTTTEE
T ss_pred EcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceE---Ec-----ccCCCeEE--CCCCCEEEEEEeccCCCcc
Confidence 3455555888877642 3678999998865532 22 34677888 99999744444322 3
Q ss_pred eEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC-----------
Q 011924 258 GVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN----------- 326 (475)
Q Consensus 258 ~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d----------- 326 (475)
.|.+|++.+++......... +. +++|+|+|+.|+.++.+
T Consensus 86 ~l~~~~~~~g~~~~l~~~~~-~~-----------------------------~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAKN-IR-----------------------------SLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp EEEEEETTTTEEEEEEEESE-EE-----------------------------EEEECTTSSEEEEEEECCCC--------
T ss_pred eEEEEECCCCceEEEEcCCC-cc-----------------------------ceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 47788888887766555444 77 89999999999888642
Q ss_pred ----------------CcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCC-------eEEEEECCCCCceE
Q 011924 327 ----------------PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDK-------TCRIWDLRNLSESV 383 (475)
Q Consensus 327 ----------------g~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg-------~v~iwd~~~~~~~~ 383 (475)
..|++||+.+++.+..+.. . .+..++|+|+| ++++++.++ ...||.+. .++ .
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~ 210 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGK-E 210 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTE-E
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCc-e
Confidence 5689999998877456655 4 78899999999 777776542 44555554 344 3
Q ss_pred EEEecCCCceEEEEEccCCCEEEEEcCC--------CeEEEEECCCCeeEEEEeccCCCeEE-EEEcCCCCeEEEEEecC
Q 011924 384 AVLKGNLGAIRSIRYTSDGRYMATAEPA--------DFVHVYDVKSGYEKEQEIDFFGEISG-ISFSPDTESLFIGVWDR 454 (475)
Q Consensus 384 ~~~~~~~~~v~~l~~spdg~~la~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~i~~-l~fspdg~~l~~~~~D~ 454 (475)
..+..+ ..+..+ +|+|++|+.++.+ ..|.+|| ++........+...+.. +.|+ +| .++++..|+
T Consensus 211 ~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 211 EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 444444 455544 9999988877643 3688888 55443333345677886 9999 88 888888777
Q ss_pred Cc
Q 011924 455 TY 456 (475)
Q Consensus 455 ~~ 456 (475)
..
T Consensus 284 ~~ 285 (347)
T 2gop_A 284 SV 285 (347)
T ss_dssp EE
T ss_pred cE
Confidence 54
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=2.7e-13 Score=130.05 Aligned_cols=234 Identities=14% Similarity=0.116 Sum_probs=161.7
Q ss_pred EEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC----CeEEEEECC
Q 011924 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRDFDMG 265 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d----g~v~iwd~~ 265 (475)
+.+++| ++++++++..++.|.+|+....... .....+...+.++++ +|+|+. +++...+ +.|.+||..
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~i~~--~~dg~l-~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK---RPFVSHKANPAAIKI--HKDGRL-FVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEE---EEEECSSSSEEEEEE--CTTSCE-EEEECTTSSSCCEEEEECTT
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE---EEeeCCCCCcceEEE--CCCCcE-EEEeCCCCCCCceEEEEeCC
Confidence 456677 7787788888999999998765533 222234566888988 999974 6666555 689999998
Q ss_pred CCeeeeeee---ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC------CCcEEEEECCC
Q 011924 266 KYQLSKHFR---FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD------NPDGLLVDSMT 336 (475)
Q Consensus 266 ~~~~~~~~~---~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~------dg~i~iwd~~~ 336 (475)
++.....+. ....+. +++++|+|+++++... .+.|..++..+
T Consensus 121 ~~~~~~~~~~~~~~~~~~-----------------------------~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCID-----------------------------DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp SCSCEEEECSSSSCCCEE-----------------------------EEEECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCEEEEEEccCccCCccc-----------------------------ceEECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 766543332 223455 8999999988876653 35567777655
Q ss_pred CceEEEeecCCCCeEEEEEecCCCEEEEE-eCCCeEEEEECCCCCceEEEE--------ecCCCceEEEEEccCCCEEEE
Q 011924 337 GKTIASLCGHLDFSFASAWHPNGVTFATG-NQDKTCRIWDLRNLSESVAVL--------KGNLGAIRSIRYTSDGRYMAT 407 (475)
Q Consensus 337 ~~~~~~l~~h~~~v~~~~~sp~g~~l~t~-s~dg~v~iwd~~~~~~~~~~~--------~~~~~~v~~l~~spdg~~la~ 407 (475)
++... +..+...+..++|+|+++.|+.+ +.++.|.+||+...+..+..+ .++ ..+..++++++|+++++
T Consensus 172 ~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~ 249 (333)
T 2dg1_A 172 RTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVA 249 (333)
T ss_dssp CCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEE
T ss_pred CEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEE
Confidence 55433 33334467899999999866544 557899999996423322211 111 36788999999998888
Q ss_pred EcCCCeEEEEECCCCeeEEEEeccCC------CeEEEEEcCCCCeEEEEEecCC---cceEEEEE
Q 011924 408 AEPADFVHVYDVKSGYEKEQEIDFFG------EISGISFSPDTESLFIGVWDRT---YGSLLEYG 463 (475)
Q Consensus 408 ~~~dg~i~iwd~~~~~~~~~~~~~~~------~i~~l~fspdg~~l~~~~~D~~---~~~ll~~~ 463 (475)
...++.|.+||. ++..+..+..... .+.+++|+||++.|++++.++. -+.++.+.
T Consensus 250 ~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~ 313 (333)
T 2dg1_A 250 MYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVN 313 (333)
T ss_dssp EETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEE
T ss_pred EcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEe
Confidence 777889999997 5666655554332 6899999999988988777642 34566554
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=3.8e-14 Score=149.28 Aligned_cols=214 Identities=12% Similarity=0.037 Sum_probs=145.1
Q ss_pred EcCcE-EEEEec-CceEEEEeCC--C-CCceEEEeeecC----CCCceeEEEEEeCCCCCeEEEEEeCC----------C
Q 011924 197 VKDKL-LVAGGF-QGELICKHLD--R-PGVSFCSRTTYD----DNAITNAVEIYGSPSGAVHFTASNND----------C 257 (475)
Q Consensus 197 ~~~~~-lvsg~~-dg~i~vw~~~--~-~~~~~~~~~~~~----~~~~v~~l~~~~s~~g~~~l~s~s~d----------g 257 (475)
.+|+. |+.++. +..|.++++. . .... .+... +...+..++| +|+|+. |++++.+ .
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~---~l~~~~~~~~~~~~~~~~~--spDg~~-l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPR---PLTPVSAVGGGLRWADPVL--LPERGE-VWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCE---ECSCCCCSTTCEEEEEEEE--ETTTTE-EEEEEEEECSSSTTCEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCE---eccCCccCCCCccccCcEE--CCCCCE-EEEEEecccCCCCCCcee
Confidence 56887 665543 5667777665 2 2221 22221 4566778888 999997 5555555 5
Q ss_pred eEEEEECCC------Ceeeeee-eccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC----
Q 011924 258 GVRDFDMGK------YQLSKHF-RFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN---- 326 (475)
Q Consensus 258 ~v~iwd~~~------~~~~~~~-~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d---- 326 (475)
.|++|++.+ ++..... .+...+. .++|||||+.|+.++.+
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------------------------~~~~SpDG~~la~~~~~~~~~ 212 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHRFVT-----------------------------GPRLSPDGRQAVWLAWDHPRM 212 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSSEEC-----------------------------CCEECTTSSEEEEEEECTTCC
T ss_pred EEEEEECCCCccccCCceeEEEecCCCccc-----------------------------CceECCCCCEEEEEECCCCCC
Confidence 899999987 5554443 3344455 78999999999988754
Q ss_pred ----CcEEEEECC-CC---ceEEEeecCCCCeEEEEEecCCCEEEEEeCCC--eEEEEECCCCCceEEEEecCCCc----
Q 011924 327 ----PDGLLVDSM-TG---KTIASLCGHLDFSFASAWHPNGVTFATGNQDK--TCRIWDLRNLSESVAVLKGNLGA---- 392 (475)
Q Consensus 327 ----g~i~iwd~~-~~---~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg--~v~iwd~~~~~~~~~~~~~~~~~---- 392 (475)
..|++||+. +| +......+|...+..++|+|||+++++++.++ .|.+||+.. ++.......+...
T Consensus 213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~ 291 (662)
T 3azo_A 213 PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPL 291 (662)
T ss_dssp TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCC
T ss_pred CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC-CceeecccccccccCcc
Confidence 379999998 57 44444455678899999999999888888888 566666643 4433332322221
Q ss_pred ----eEEEEEccCCCEEEEEcCCCeEEEE--ECCCCeeEEEEeccCCCeEEEEEcCCCCeEEE
Q 011924 393 ----IRSIRYTSDGRYMATAEPADFVHVY--DVKSGYEKEQEIDFFGEISGISFSPDTESLFI 449 (475)
Q Consensus 393 ----v~~l~~spdg~~la~~~~dg~i~iw--d~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~ 449 (475)
+..++|+|+++++++++. +.++|| |+.++. +..+..+.+.+..+ |++++..++.
T Consensus 292 w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~~~~~~ 351 (662)
T 3azo_A 292 WTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAAT-LTVSGTRAVG 351 (662)
T ss_dssp CSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEE-EEEETTEEEE
T ss_pred ccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEE-EecCCCEEEE
Confidence 567899999999999998 988888 666665 56666677777766 1455555443
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.65 E-value=1.1e-13 Score=134.57 Aligned_cols=236 Identities=9% Similarity=-0.045 Sum_probs=163.9
Q ss_pred cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEe---------CCCeEEEEECCCCeeeeeee---
Q 011924 207 FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN---------NDCGVRDFDMGKYQLSKHFR--- 274 (475)
Q Consensus 207 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s---------~dg~v~iwd~~~~~~~~~~~--- 274 (475)
.++.|.+||..+.+.. .....+..+ .+++ +|+|+.++++.. .+++|.+||+.+++.+..+.
T Consensus 29 ~d~~v~v~D~~t~~~~---~~i~~g~~p--~i~~--spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFL---GMVPTAFNG--HVQV--SNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp GGCEEEEEETTTCCEE---EEEECCEEE--EEEE--CTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred ccCeEEEEECCCCeEE---EEecCCCCC--ceEE--CCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 4789999998766544 222233333 6777 999998555432 36789999999988877665
Q ss_pred -------ccccEEeccCCceEE--------EEEEeecccceEEEE-eeeee--eEEECCCC-cEEEEEeCCCcEEEEECC
Q 011924 275 -------FPWPVNVSSSYCIIL--------LCRLLNFMTEKVIIC-LLCLQ--HSSQSPDG-KLLIIVGDNPDGLLVDSM 335 (475)
Q Consensus 275 -------~~~~v~~s~~~~~l~--------~~~v~d~~~~~~~~~-~~~i~--~~~~sp~g-~~l~~~~~dg~i~iwd~~ 335 (475)
.+..+.|+|+++.+. .+.+||..+++.+.. +..-. .+.+.|++ ..+++.+.+|.+.+|++.
T Consensus 102 ~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEEC
T ss_pred cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEEC
Confidence 356788999998773 578999999887765 33211 25677865 677788899999999986
Q ss_pred C-CceEEEe------ecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCc-eEEEEecC----------CCceEEEE
Q 011924 336 T-GKTIASL------CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE-SVAVLKGN----------LGAIRSIR 397 (475)
Q Consensus 336 ~-~~~~~~l------~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~-~~~~~~~~----------~~~v~~l~ 397 (475)
. ++..... ..+..++ .+.++|++..++..+.+++|.++|+..... ....+... ......++
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a 260 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG 260 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred CCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEE
Confidence 4 6554222 2222222 334577888888888899999999964221 12222110 01122378
Q ss_pred EccCCCEEEEEcC-----------CCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEe
Q 011924 398 YTSDGRYMATAEP-----------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 398 ~spdg~~la~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
|+|+++.++++.. .+.|.+||+++++.+..+..+. +.+++|+|||++|+++..
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC
Confidence 9999888777643 3589999999999988887765 999999999999998764
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.65 E-value=6.7e-15 Score=144.24 Aligned_cols=220 Identities=13% Similarity=0.106 Sum_probs=146.0
Q ss_pred EEcCcEEEEEec-Cc--eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeee
Q 011924 196 AVKDKLLVAGGF-QG--ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKH 272 (475)
Q Consensus 196 ~~~~~~lvsg~~-dg--~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~ 272 (475)
+.+|+.|+.++. +| .|.+|++...... .++..+...+..+.| +|+|+. |+.++.++.|++||+.+++....
T Consensus 44 SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~---~lt~~~~~~~~~~~~--spdg~~-l~~~~~~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 44 TRDGSKLLFGGAFDGPWNYYLLDLNTQVAT---QLTEGRGDNTFGGFL--SPDDDA-LFYVKDGRNLMRVDLATLEENVV 117 (388)
T ss_dssp CTTSCEEEEEECTTSSCEEEEEETTTCEEE---ECCCSSCBCSSSCEE--CTTSSE-EEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCCCEEEEEEcCCCCceEEEEeCCCCceE---EeeeCCCCCccceEE--cCCCCE-EEEEeCCCeEEEEECCCCcceee
Confidence 338998888877 67 4777787654332 455555555545667 999997 77777889999999999887665
Q ss_pred eecccc-EEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe----------------------CCCcE
Q 011924 273 FRFPWP-VNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG----------------------DNPDG 329 (475)
Q Consensus 273 ~~~~~~-v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~----------------------~dg~i 329 (475)
+..+.. +.. ....++|++++++... .+..|
T Consensus 118 ~~~~~~~~~~---------------------------~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 118 YQVPAEWVGY---------------------------GTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp EECCTTEEEE---------------------------EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred eechhhcccc---------------------------cceeECCCCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 553332 210 0224588998887432 34679
Q ss_pred EEEECCCCceEEEeecCCCCeEEEEEec-CCCEEEEEeCC------CeEEEEECCCCCceEEEEecCC--CceEEEEEcc
Q 011924 330 LLVDSMTGKTIASLCGHLDFSFASAWHP-NGVTFATGNQD------KTCRIWDLRNLSESVAVLKGNL--GAIRSIRYTS 400 (475)
Q Consensus 330 ~iwd~~~~~~~~~l~~h~~~v~~~~~sp-~g~~l~t~s~d------g~v~iwd~~~~~~~~~~~~~~~--~~v~~l~~sp 400 (475)
++||+.+++.. .+..+...+..++|+| +|+.|+..+.. ..|.++|+.. .....+..+. ..+..++|+|
T Consensus 171 ~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 171 MRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHAEGESCTHEFWVP 247 (388)
T ss_dssp EEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCCEESCCCCTTEEEEEEEECT
T ss_pred EEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--CceEEeeeCCCCcccccceECC
Confidence 99999988754 4445677899999999 99999887753 2677778753 3344444443 3577899999
Q ss_pred CCCEEEEEcCC-----CeEEEEECCCCeeEEEEeccCC------CeEEEEEcCCCCeEEEEEe
Q 011924 401 DGRYMATAEPA-----DFVHVYDVKSGYEKEQEIDFFG------EISGISFSPDTESLFIGVW 452 (475)
Q Consensus 401 dg~~la~~~~d-----g~i~iwd~~~~~~~~~~~~~~~------~i~~l~fspdg~~l~~~~~ 452 (475)
||+.|+..+.. ..|++||+.+++...... ..+ ...+++|+|||+.|+....
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~ 309 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETLENRQLTS-MPACSHLMSNYDGSLMVGDGSDAPVDVQ 309 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEE-ECCEEEEEECTTSSEEEEEECCC-----
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCCceEEEEc-CCCceeeeecCCCCeEccCCCcceeEee
Confidence 99977665432 249999999886433211 111 1223479999999987643
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.64 E-value=5.1e-13 Score=141.96 Aligned_cols=225 Identities=11% Similarity=0.009 Sum_probs=158.7
Q ss_pred eEEEEEE--cCcEEEEEecCc-----eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCe-----
Q 011924 191 QVSTLAV--KDKLLVAGGFQG-----ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCG----- 258 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~dg-----~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~----- 258 (475)
.+..++| +|++|+.+...+ +|++|++.+..... ...... .+..++| +|+|+. |+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~--~~~~~~--~~~~~~w--spDg~~-l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP--DVLERV--KFSCMAW--THDGKG-MFYNAYPQQDGKSD 198 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE--EEEEEE--CSCCEEE--CTTSSE-EEEEECCCCSSCCS
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCc--ccccCc--ccceEEE--EeCCCE-EEEEEECCcccccc
Confidence 5677777 899988776543 89999998765432 111111 2566888 999997 555556654
Q ss_pred -----------EEEEECCCCeee--eeee---ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEE
Q 011924 259 -----------VRDFDMGKYQLS--KHFR---FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLII 322 (475)
Q Consensus 259 -----------v~iwd~~~~~~~--~~~~---~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~ 322 (475)
|++|++.+++.. ..+. ++..+. .++|||+|++|+.
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~-----------------------------~~~~SpDg~~l~~ 249 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG-----------------------------GAELSDDGRYVLL 249 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE-----------------------------EEEECTTSCEEEE
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE-----------------------------EEEEcCCCCEEEE
Confidence 999999876532 2222 233345 7899999999988
Q ss_pred EeC-----CCcEEEEECCC------Cc-eEEEeecCCCCeEEEEEecCCCEEEEEeCC----CeEEEEECCCCCc-eEEE
Q 011924 323 VGD-----NPDGLLVDSMT------GK-TIASLCGHLDFSFASAWHPNGVTFATGNQD----KTCRIWDLRNLSE-SVAV 385 (475)
Q Consensus 323 ~~~-----dg~i~iwd~~~------~~-~~~~l~~h~~~v~~~~~sp~g~~l~t~s~d----g~v~iwd~~~~~~-~~~~ 385 (475)
++. +..|++||+.+ +. ....+..+...+.. .|+|+|..|+..+.. ..|.+||+..... ....
T Consensus 250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 328 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKV 328 (710)
T ss_dssp EEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE
T ss_pred EEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccee
Confidence 764 56899999976 53 45667777766655 588998888776653 3699999976321 2344
Q ss_pred EecCCC--ceEEEEEccCCCEEEEEcCCC--eEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEe
Q 011924 386 LKGNLG--AIRSIRYTSDGRYMATAEPAD--FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 386 ~~~~~~--~v~~l~~spdg~~la~~~~dg--~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
+..+.. .+..++|++++.+++++..++ .|.+|++.+|..+..+..+.+.+.+++++|++..|+....
T Consensus 329 l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~s 399 (710)
T 2xdw_A 329 LVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFT 399 (710)
T ss_dssp EECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEE
T ss_pred ccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEe
Confidence 555443 688899998888888888887 4677788778777777767788999999999987775533
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=1e-11 Score=127.35 Aligned_cols=279 Identities=14% Similarity=0.085 Sum_probs=187.4
Q ss_pred cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEEEeCC--CCCceEE
Q 011924 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLD--RPGVSFC 224 (475)
Q Consensus 149 ~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~--~~~~~~~ 224 (475)
.++.|.+++..+++....+... ..+..+.+ ++++|++++.+|.|.+||+. +....
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g-------------------~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v-- 233 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTG-------------------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV-- 233 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECS-------------------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--
T ss_pred CCCeEEEEECCCCeEEEEEeCC-------------------CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--
Confidence 3588999999888766544321 11234445 89999999999999999995 44333
Q ss_pred EeeecCCCCceeEEEEEeC----CCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc---------------ccEEeccCC
Q 011924 225 SRTTYDDNAITNAVEIYGS----PSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP---------------WPVNVSSSY 285 (475)
Q Consensus 225 ~~~~~~~~~~v~~l~~~~s----~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~---------------~~v~~s~~~ 285 (475)
..+..+ .....+++ + |+|++++++...+++|.++|..+.+.+..+... ..+.+++.+
T Consensus 234 ~~i~~G--~~P~~ia~--s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 234 AEIKIG--SEARSIET--SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp EEEECC--SEEEEEEE--CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred EEEecC--CCCceeEE--ccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 222222 23467777 9 699987778888899999999998887766521 123344544
Q ss_pred ceEE-------EEEEeecccceEEE-----EeeeeeeEEECCCCcEEEEEe-CCCcEEEEECCCCceEEEeec-----CC
Q 011924 286 CIIL-------LCRLLNFMTEKVII-----CLLCLQHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKTIASLCG-----HL 347 (475)
Q Consensus 286 ~~l~-------~~~v~d~~~~~~~~-----~~~~i~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~l~~-----h~ 347 (475)
.... .+.++|....+... .......+.|+|+|++++++. .++.|.++|+.+++.+..+.. |.
T Consensus 310 ~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 310 PEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp SEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred CEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 4332 34455554432211 111345788999999987765 578899999999998776653 43
Q ss_pred CCeEEEEEecCC-CEEEEEe-CCCeEEEEECCCC------CceEEEEecCCCceEEEEEccCCCEEEEEcC-------CC
Q 011924 348 DFSFASAWHPNG-VTFATGN-QDKTCRIWDLRNL------SESVAVLKGNLGAIRSIRYTSDGRYMATAEP-------AD 412 (475)
Q Consensus 348 ~~v~~~~~sp~g-~~l~t~s-~dg~v~iwd~~~~------~~~~~~~~~~~~~v~~l~~spdg~~la~~~~-------dg 412 (475)
+....+ ++|++ ...+++. .+++|.++|.... .+.+..+......-..++.+|++++|.+... .+
T Consensus 390 g~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~ 468 (567)
T 1qks_A 390 GRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISG 468 (567)
T ss_dssp TTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHT
T ss_pred ccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCc
Confidence 322222 58874 4445554 4689999998652 3567777765444346889999999998763 35
Q ss_pred eEEEEECCCC-----eeE-EEEec--------cCCCeEEEEEcCCCCeEEEEEec
Q 011924 413 FVHVYDVKSG-----YEK-EQEID--------FFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 413 ~i~iwd~~~~-----~~~-~~~~~--------~~~~i~~l~fspdg~~l~~~~~D 453 (475)
.|.|+|+.+. ... ..+.. ....+..+.|+|+|++|+++.|.
T Consensus 469 ~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~ 523 (567)
T 1qks_A 469 SVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWN 523 (567)
T ss_dssp CEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEEC
T ss_pred eEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeec
Confidence 8999999876 222 22211 13478999999999999999874
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=2.6e-13 Score=126.72 Aligned_cols=213 Identities=12% Similarity=0.032 Sum_probs=165.7
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc-
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP- 276 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~- 276 (475)
.+++|++++.++.|.+||..+.+....... +....+..+.+ +|+|+. ++ +.++.|..||. +++.+..+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~--~~~~~~~~~~~--~pdG~i-lv--s~~~~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL--EKGWECNSVAA--TKAGEI-LF--SYSKGAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC--CTTCCCCEEEE--CTTSCE-EE--ECBSEEEEECT-TSCEEEEEECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC--CccCCCcCeEE--CCCCCE-EE--eCCCCEEEECC-CCCEEEEEcCCC
Confidence 467899999999999999877665543222 22135678888 999985 55 35788999999 88888888753
Q ss_pred -ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC-CCcEEEEECCCCceEEEeec------CCC
Q 011924 277 -WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD-NPDGLLVDSMTGKTIASLCG------HLD 348 (475)
Q Consensus 277 -~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~-dg~i~iwd~~~~~~~~~l~~------h~~ 348 (475)
..+. ++.+.|+|+++++.+. ++.+..+|. +|+.+..+.. +..
T Consensus 76 ~~~~~-----------------------------~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~ 125 (276)
T 3no2_A 76 GCEMQ-----------------------------TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHA 125 (276)
T ss_dssp TCEEE-----------------------------EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGG
T ss_pred Ccccc-----------------------------ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccc
Confidence 3555 8889999999999887 778888885 7888777652 223
Q ss_pred CeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEE
Q 011924 349 FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE 428 (475)
Q Consensus 349 ~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~ 428 (475)
....+++.++|+++++...++.|..||.. ++.+-.+... ..+.++.+.++|+++++++.++.|..+|..+|+.+.++
T Consensus 126 ~~~~v~~~~~G~~lv~~~~~~~v~~~d~~--G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 126 QFRQINKNKKGNYLVPLFATSEVREIAPN--GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp SCSCCEECTTSCEEEEETTTTEEEEECTT--SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred cccCceECCCCCEEEEecCCCEEEEECCC--CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 45567789999999999999999999985 6777777654 34567888999999999988889999999999998887
Q ss_pred eccC------CCeEEEEEcCCCCeEEEEE
Q 011924 429 IDFF------GEISGISFSPDTESLFIGV 451 (475)
Q Consensus 429 ~~~~------~~i~~l~fspdg~~l~~~~ 451 (475)
.... ..+.++...++|..+++..
T Consensus 203 ~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 203 NANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred cCCCCCCccccccccceEcCCCCEEEEec
Confidence 6432 2378899999998776653
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.62 E-value=1.5e-13 Score=127.41 Aligned_cols=228 Identities=11% Similarity=0.063 Sum_probs=153.7
Q ss_pred eEEEEEE--cCcEEE-EEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 191 QVSTLAV--KDKLLV-AGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 191 ~v~~l~~--~~~~lv-sg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
...++++ ++++++ +.+.++.|.+|+....... .........+..+++ +++|. ++++.. ++.|.+|+....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~p~~i~~--~~~g~-l~v~~~-~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT---VLPFNGLYQPQGLAV--DGAGT-VYVTDF-NNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E---ECCCCSCCSCCCEEE--CTTCC-EEEEET-TTEEEEECTTCS
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc---eEeeCCcCCcceeEE--CCCCC-EEEEcC-CCEEEEEeCCCc
Confidence 4567777 677666 5477899999986543322 121223345677888 89887 466655 889999998765
Q ss_pred eeeeeee--ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeec
Q 011924 268 QLSKHFR--FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCG 345 (475)
Q Consensus 268 ~~~~~~~--~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~ 345 (475)
... .+. ....+. +++++|+|+++++...++.|.+|+..+.........
T Consensus 98 ~~~-~~~~~~~~~p~-----------------------------~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~ 147 (270)
T 1rwi_B 98 NQT-VLPFDGLNYPE-----------------------------GLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT 147 (270)
T ss_dssp CCE-ECCCCSCSSEE-----------------------------EEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC
T ss_pred eEe-eeecCCcCCCc-----------------------------ceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc
Confidence 432 222 123455 889999999887777788999998665544332233
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeE
Q 011924 346 HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEK 425 (475)
Q Consensus 346 h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~ 425 (475)
....+.+++++|+|+++++...++.|.+||... .........+...+..++++++|+++++...++.|.+|+..+....
T Consensus 148 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 148 GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST 226 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE
T ss_pred cCCCceeEEEeCCCCEEEEECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce
Confidence 344678899999999777777788999999865 3333222233356889999999988887777889999998765433
Q ss_pred EEEeccCCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 426 EQEIDFFGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 426 ~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
.....+...+.+++++|+|+.+++...++++
T Consensus 227 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 227 VLPFTGLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp ECCCCSCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred eeccCCCCCceeEEECCCCCEEEEECCCCEE
Confidence 2222234578999999999855555555544
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.62 E-value=2.5e-12 Score=120.43 Aligned_cols=234 Identities=10% Similarity=0.090 Sum_probs=156.8
Q ss_pred eeEEecCCCeEEEe--cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE---cCcEEEEEec-C
Q 011924 135 NLVWATSKHDVYLM--SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGF-Q 208 (475)
Q Consensus 135 ~l~~~~~~~~v~~~--~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~~lvsg~~-d 208 (475)
.+.+.+. ..+|++ .++.|..|+.. ++....+...+. . ..+...+..+++ ++.++++... +
T Consensus 34 ~v~~~~~-g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~------~------~~~~~~p~~i~~~~~~g~l~v~~~~~~ 99 (286)
T 1q7f_A 34 GVAVNAQ-NDIIVADTNNHRIQIFDKE-GRFKFQFGECGK------R------DSQLLYPNRVAVVRNSGDIIVTERSPT 99 (286)
T ss_dssp EEEECTT-CCEEEEEGGGTEEEEECTT-SCEEEEECCBSS------S------TTCBSSEEEEEEETTTTEEEEEECGGG
T ss_pred eEEECCC-CCEEEEECCCCEEEEECCC-CcEEEEecccCC------C------cccccCceEEEEEcCCCeEEEEcCCCC
Confidence 3334433 346664 35789999865 333222221110 0 001124567777 4555555533 8
Q ss_pred ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeec---cccEEeccCC
Q 011924 209 GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF---PWPVNVSSSY 285 (475)
Q Consensus 209 g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~---~~~v~~s~~~ 285 (475)
+.|.+|+.. .... ......+...+..+++ +|+|+ ++++...++.|.+|+.. ++.+..+.. ...+.
T Consensus 100 ~~i~~~d~~-g~~~--~~~~~~~~~~~~~i~~--~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~----- 167 (286)
T 1q7f_A 100 HQIQIYNQY-GQFV--RKFGATILQHPRGVTV--DNKGR-IIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPN----- 167 (286)
T ss_dssp CEEEEECTT-SCEE--EEECTTTCSCEEEEEE--CTTSC-EEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEE-----
T ss_pred CEEEEECCC-CcEE--EEecCccCCCceEEEE--eCCCC-EEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcE-----
Confidence 899999943 3222 2222234456788888 99997 47777778999999964 555555542 23355
Q ss_pred ceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecC--CCCeEEEEEecCCCEEE
Q 011924 286 CIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGH--LDFSFASAWHPNGVTFA 363 (475)
Q Consensus 286 ~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h--~~~v~~~~~sp~g~~l~ 363 (475)
+++++|+|+++++...++.|++||. .++.+..+..+ ...+..++++|+|++++
T Consensus 168 ------------------------~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v 222 (286)
T 1q7f_A 168 ------------------------GVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILI 222 (286)
T ss_dssp ------------------------EEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEE
T ss_pred ------------------------EEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEE
Confidence 8999999998887778899999997 56666667543 36789999999999888
Q ss_pred EEeCCC-eEEEEECCCCCceEEEEecCCC--ceEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q 011924 364 TGNQDK-TCRIWDLRNLSESVAVLKGNLG--AIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422 (475)
Q Consensus 364 t~s~dg-~v~iwd~~~~~~~~~~~~~~~~--~v~~l~~spdg~~la~~~~dg~i~iwd~~~~ 422 (475)
+...++ .|.+||.. ++.+..+..+.. .+.+++++|+|+++++ +.++.|++|++...
T Consensus 223 ~~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 223 ADNHNNFNLTIFTQD--GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EECSSSCEEEEECTT--SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EeCCCCEEEEEECCC--CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 888776 99999963 566666655432 4779999999987766 56899999997653
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.62 E-value=4.9e-13 Score=128.33 Aligned_cols=220 Identities=12% Similarity=0.107 Sum_probs=153.2
Q ss_pred eEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEEEeCCCCC-ceEEEeee
Q 011924 152 SVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPG-VSFCSRTT 228 (475)
Q Consensus 152 ~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~-~~~~~~~~ 228 (475)
.|..|+..+++....+.. + .-.....+++ +++++++...++.|++|+..... ... .+.
T Consensus 70 ~i~~~d~~~g~~~~~~~~-~----------------~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~--~~~ 130 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGK-N----------------LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLL--ILG 130 (329)
T ss_dssp CEEEECTTTCCEEEEECT-T----------------TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSE--EES
T ss_pred cEEEEECCCCeEEeccCC-C----------------ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEE--Eec
Confidence 588888777665432211 0 0113556777 78888888889999999986442 121 111
Q ss_pred --------cCCCCceeEEEEEeCC-CCCeEEEEEe-CCCeEEEEECCCCeeeeeeecccc------EEeccCCceEEEEE
Q 011924 229 --------YDDNAITNAVEIYGSP-SGAVHFTASN-NDCGVRDFDMGKYQLSKHFRFPWP------VNVSSSYCIILLCR 292 (475)
Q Consensus 229 --------~~~~~~v~~l~~~~s~-~g~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~~~~------v~~s~~~~~l~~~~ 292 (475)
..+-...+.|++ +| +|. ++++.+ .++.|++|+ ..++.+..+..... -.+
T Consensus 131 ~~~~~g~~~~~~~~P~~ia~--~~~~g~-lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~----------- 195 (329)
T 3fvz_A 131 RSMQPGSDQNHFCQPTDVAV--EPSTGA-VFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQF----------- 195 (329)
T ss_dssp BTTBCCCSTTCCSSEEEEEE--CTTTCC-EEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEE-----------
T ss_pred ccCCCCCCccccCCCcEEEE--eCCCCe-EEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCccc-----------
Confidence 223335678888 99 665 477775 689999999 45666665542110 000
Q ss_pred EeecccceEEEEeeeeeeEEECCC-CcEEEEEeCCCcEEEEECCCCceEEEee--cCCCCeEEEEEecCCCEEEEE----
Q 011924 293 LLNFMTEKVIICLLCLQHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLC--GHLDFSFASAWHPNGVTFATG---- 365 (475)
Q Consensus 293 v~d~~~~~~~~~~~~i~~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~~~~~l~--~h~~~v~~~~~sp~g~~l~t~---- 365 (475)
.....++++|+ +.++++...++.|++|+..+|+.+..+. .+...+.+++|+| +..+++.
T Consensus 196 -------------~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~ 261 (329)
T 3fvz_A 196 -------------SVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPY 261 (329)
T ss_dssp -------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCC
T ss_pred -------------CCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEE
Confidence 01118999998 7777777788999999998899888884 4567889999999 4333333
Q ss_pred ---eCCCeEEEEECCCCCceEEEEe---cCCCceEEEEEccCCCEEEEEcCCCeEEEEECC
Q 011924 366 ---NQDKTCRIWDLRNLSESVAVLK---GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420 (475)
Q Consensus 366 ---s~dg~v~iwd~~~~~~~~~~~~---~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~ 420 (475)
..+.+|++||..+ ++.+..+. ++...+..++++|+|.++++...++.|++|++.
T Consensus 262 v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 262 FGDQEPVQGFVMNFSS-GEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp TTCSCCCCEEEEETTT-CCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eccCCCcEEEEEEcCC-CeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 3455899999976 77777773 456678999999999888888889999999975
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.59 E-value=7.9e-13 Score=126.84 Aligned_cols=249 Identities=6% Similarity=-0.040 Sum_probs=169.0
Q ss_pred CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE-cCcEEEEEecCceEEEEeCCCCCceEEEeee
Q 011924 150 HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTT 228 (475)
Q Consensus 150 ~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~ 228 (475)
+.+|..++..+++....+..... .. .-+.....+++ .++++++...++.|.+||..+.+.....
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n----~~--------~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i--- 80 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRAN----GF--------KLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRI--- 80 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHH----SS--------CCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEE---
T ss_pred CceEEEEECCCCEEhhhhHhhhc----Cc--------ccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEc---
Confidence 46788898887754332111000 00 00112456667 4455555666799999999876654222
Q ss_pred cCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccc------cEEeccCCceEEEEEEeecccceEE
Q 011924 229 YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW------PVNVSSSYCIILLCRLLNFMTEKVI 302 (475)
Q Consensus 229 ~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~------~v~~s~~~~~l~~~~v~d~~~~~~~ 302 (475)
. .......+++ ++++ .++++...++.|.+||..+++....+.... ...
T Consensus 81 ~-~~~~p~~i~~--~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~---------------------- 134 (328)
T 3dsm_A 81 T-GFTSPRYIHF--LSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE---------------------- 134 (328)
T ss_dssp E-CCSSEEEEEE--EETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC----------------------
T ss_pred C-CCCCCcEEEE--eCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc----------------------
Confidence 2 2345677877 8888 446665589999999999999887776433 334
Q ss_pred EEeeeeeeEEECCCCcEEEEEe-CCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCC----------CeE
Q 011924 303 ICLLCLQHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD----------KTC 371 (475)
Q Consensus 303 ~~~~~i~~~~~sp~g~~l~~~~-~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~d----------g~v 371 (475)
.+++ .+++++++.. .++.|.++|+.+++.+..+... .....++++|+|++++++..+ +.|
T Consensus 135 -------~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 135 -------QMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp -------CEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred -------eEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceE
Confidence 6677 3444444433 4789999999999988887743 345678999999977777654 789
Q ss_pred EEEECCCCCceEEEEecC-CCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEE-Eec-cCCCeEEEEEcCCCCeEE
Q 011924 372 RIWDLRNLSESVAVLKGN-LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ-EID-FFGEISGISFSPDTESLF 448 (475)
Q Consensus 372 ~iwd~~~~~~~~~~~~~~-~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~-~~~-~~~~i~~l~fspdg~~l~ 448 (475)
.++|..+ .+....+... ......++|+|++++|+++.. .|.+||+.+++.... +.. ....+.+++++|++..|+
T Consensus 206 ~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~ly 282 (328)
T 3dsm_A 206 YRIDAET-FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVY 282 (328)
T ss_dssp EEEETTT-TEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEE
T ss_pred EEEECCC-CeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEE
Confidence 9999976 6666566532 236789999999999988765 899999988765321 111 145789999999766676
Q ss_pred EEE
Q 011924 449 IGV 451 (475)
Q Consensus 449 ~~~ 451 (475)
++.
T Consensus 283 va~ 285 (328)
T 3dsm_A 283 VAD 285 (328)
T ss_dssp EEE
T ss_pred EEc
Confidence 665
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=1e-12 Score=139.59 Aligned_cols=193 Identities=8% Similarity=-0.066 Sum_probs=137.9
Q ss_pred CCCceeEEEEEeCCCCCeEEEEEeCCC----eEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEee
Q 011924 231 DNAITNAVEIYGSPSGAVHFTASNNDC----GVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLL 306 (475)
Q Consensus 231 ~~~~v~~l~~~~s~~g~~~l~s~s~dg----~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~ 306 (475)
+...+..++| ||+|+.++++.+..| .|++||+.+++..........+.
T Consensus 123 ~~~~~~~~~~--SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~-------------------------- 174 (710)
T 2xdw_A 123 GTVALRGYAF--SEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFS-------------------------- 174 (710)
T ss_dssp SCEEEEEEEE--CTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSC--------------------------
T ss_pred CCEEEEEEEE--CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccc--------------------------
Confidence 3345777888 999998555554444 89999999988765332222234
Q ss_pred eeeeEEECCCCcEEEEEeCCCc----------------EEEEECCCCce--EEEee--cCCCCeEEEEEecCCCEEEEEe
Q 011924 307 CLQHSSQSPDGKLLIIVGDNPD----------------GLLVDSMTGKT--IASLC--GHLDFSFASAWHPNGVTFATGN 366 (475)
Q Consensus 307 ~i~~~~~sp~g~~l~~~~~dg~----------------i~iwd~~~~~~--~~~l~--~h~~~v~~~~~sp~g~~l~t~s 366 (475)
.++|+|||+.|+.++.++. |++|++.+++. ...+. .|...+..+.|+|+|++|+.++
T Consensus 175 ---~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 175 ---CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp ---CEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred ---eEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 7899999999999887765 99999988763 22333 3556688999999999998876
Q ss_pred C-----CCeEEEEECCC------CCceEEEEecCCCceEEEEEccCCCEEEEEcCC----CeEEEEECCCCe--eEEEEe
Q 011924 367 Q-----DKTCRIWDLRN------LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA----DFVHVYDVKSGY--EKEQEI 429 (475)
Q Consensus 367 ~-----dg~v~iwd~~~------~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~d----g~i~iwd~~~~~--~~~~~~ 429 (475)
. +..|.+||+.. .......+..+...+.. .|+|+|+.|+..+.. ..|.+||+.++. ....+.
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 5 56899999964 22245666666666654 589999988776653 369999998764 234455
Q ss_pred ccCC--CeEEEEEcCCCCeEEEEEecCC
Q 011924 430 DFFG--EISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 430 ~~~~--~i~~l~fspdg~~l~~~~~D~~ 455 (475)
.+.. .+.+++|++++..+++...|+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVK 358 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCE
Confidence 5543 6888999987777777776654
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.56 E-value=5.4e-14 Score=137.87 Aligned_cols=234 Identities=13% Similarity=0.005 Sum_probs=148.2
Q ss_pred cCcEEEEEecC---ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee
Q 011924 198 KDKLLVAGGFQ---GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR 274 (475)
Q Consensus 198 ~~~~lvsg~~d---g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 274 (475)
+|++|+..... ..|.+|++...... .+...+......+.| +|+|+. |+.++.++.|++|++.+++....+.
T Consensus 46 dG~~l~~~~~~~g~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~--spdg~~-l~~~~~~~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 46 DGKKLLFAGDFDGNRNYYLLNLETQQAV---QLTEGKGDNTFGGFI--STDERA-FFYVKNELNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp TSCEEEEEECTTSSCEEEEEETTTTEEE---ECCCSSCBCTTTCEE--CTTSSE-EEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEEecCCCceEEEEECCCCcEE---EeecCCCCccccceE--CCCCCE-EEEEEcCCcEEEEECCCCCcEEEEe
Confidence 88887766443 46888887654322 333333333333667 999997 7677788899999998887655554
Q ss_pred ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEE-----eCCCcEEEEECCCCceEEEeecCCCC
Q 011924 275 FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIV-----GDNPDGLLVDSMTGKTIASLCGHLDF 349 (475)
Q Consensus 275 ~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~-----~~dg~i~iwd~~~~~~~~~l~~h~~~ 349 (475)
.+.. +++.+..++.. ..... .. .....+.|+|+++.++.+ ..+..|++||+.+++..... .+...
T Consensus 120 ~~~~--~~~~g~~l~~~-----~~~~~-~~-~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~ 189 (396)
T 3c5m_A 120 VDEE--WKGYGTWVANS-----DCTKL-VG-IEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAW 189 (396)
T ss_dssp CCTT--EEEEEEEEECT-----TSSEE-EE-EEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSC
T ss_pred cccc--cCCCCCEEEec-----cCCcc-cc-ccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcc
Confidence 2222 22222222100 00000 00 000134689999887765 35668999999988765544 46778
Q ss_pred eEEEEEec-CCCEEEEEeCC------CeEEEEECCCCCceEEEEecC--CCceEEEEEccCCCEEEEEcCC-----CeEE
Q 011924 350 SFASAWHP-NGVTFATGNQD------KTCRIWDLRNLSESVAVLKGN--LGAIRSIRYTSDGRYMATAEPA-----DFVH 415 (475)
Q Consensus 350 v~~~~~sp-~g~~l~t~s~d------g~v~iwd~~~~~~~~~~~~~~--~~~v~~l~~spdg~~la~~~~d-----g~i~ 415 (475)
+..+.|+| +++.|+..+.+ ..|.+||+.. +. ...+..+ ...+..++|+|+|++|+.++.+ +.|+
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 89999999 88877776643 3588888854 33 3333332 2357889999999988777543 4499
Q ss_pred EEECCCCeeEEEEeccCCCeEEEEEcC-CCCeEEEEEe
Q 011924 416 VYDVKSGYEKEQEIDFFGEISGISFSP-DTESLFIGVW 452 (475)
Q Consensus 416 iwd~~~~~~~~~~~~~~~~i~~l~fsp-dg~~l~~~~~ 452 (475)
+||+.++...... ...+ .. +.|+| ||++|++++.
T Consensus 268 ~~d~~~g~~~~l~-~~~~-~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 268 KANPETLENEEVM-VMPP-CS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp EECTTTCCEEEEE-ECCS-EE-EEEECSSSSEEEEEEC
T ss_pred EEECCCCCeEEee-eCCC-CC-CCccCCCCceEEEecC
Confidence 9999887654332 2222 33 89999 9998887654
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.55 E-value=8.2e-11 Score=110.29 Aligned_cols=257 Identities=8% Similarity=-0.028 Sum_probs=168.5
Q ss_pred ceeEEecCCCeEEEec--CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 134 RNLVWATSKHDVYLMS--HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 134 r~l~~~~~~~~v~~~~--~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
+.+....+ ..+++.. ++.|..|+.. ++.... ... .....+.++++ ++.++++...++
T Consensus 18 ~~i~~d~~-g~l~v~~~~~~~v~~~d~~-~~~~~~-~~~----------------~~~~~~~~i~~~~~g~l~v~~~~~~ 78 (299)
T 2z2n_A 18 YGITVSDK-GKVWITQHKANMISCINLD-GKITEY-PLP----------------TPDAKVMCLTISSDGEVWFTENAAN 78 (299)
T ss_dssp EEEEECTT-SCEEEEETTTTEEEEECTT-CCEEEE-ECS----------------STTCCEEEEEECTTSCEEEEETTTT
T ss_pred cceEECCC-CCEEEEecCCCcEEEEcCC-CCeEEe-cCC----------------cccCceeeEEECCCCCEEEeCCCCC
Confidence 34444433 3455543 4678888876 443322 111 01134677887 677777766688
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee--ccccEEeccCCce
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPWPVNVSSSYCI 287 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~v~~s~~~~~ 287 (475)
.|..|+.. .... ..........+..+++ .++|.. +++...++.|.+|+. +++...... ....+.
T Consensus 79 ~i~~~~~~-g~~~--~~~~~~~~~~~~~i~~--~~~g~l-~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~------- 144 (299)
T 2z2n_A 79 KIGRITKK-GIIK--EYTLPNPDSAPYGITE--GPNGDI-WFTEMNGNRIGRITD-DGKIREYELPNKGSYPS------- 144 (299)
T ss_dssp EEEEECTT-SCEE--EEECSSTTCCEEEEEE--CTTSCE-EEEETTTTEEEEECT-TCCEEEEECSSTTCCEE-------
T ss_pred eEEEECCC-CcEE--EEeCCCcCCCceeeEE--CCCCCE-EEEecCCceEEEECC-CCCEEEecCCCCCCCCc-------
Confidence 99999875 2221 1122223446778888 888864 666667889999998 544432211 123345
Q ss_pred EEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEE-eecCCCCeEEEEEecCCCEEEEEe
Q 011924 288 ILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS-LCGHLDFSFASAWHPNGVTFATGN 366 (475)
Q Consensus 288 l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~-l~~h~~~v~~~~~sp~g~~l~t~s 366 (475)
+++++++|++.++....+.|..||. +++.... +......+.+++++|+|++.++..
T Consensus 145 ----------------------~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 145 ----------------------FITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp ----------------------EEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred ----------------------eEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEcc
Confidence 8899999988887767788999998 6765442 333456788999999999777776
Q ss_pred CCCeEEEEECCCCCceEEE-EecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEE-EeccCCCeEEEEEcCCC
Q 011924 367 QDKTCRIWDLRNLSESVAV-LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ-EIDFFGEISGISFSPDT 444 (475)
Q Consensus 367 ~dg~v~iwd~~~~~~~~~~-~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~-~~~~~~~i~~l~fspdg 444 (475)
.++.|.+||. + +..... +......+.+++++++|+++++...++.|.+||. ++..... ...+...+.++++ ++|
T Consensus 202 ~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g 277 (299)
T 2z2n_A 202 IGNKIGRITT-S-GEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGE 277 (299)
T ss_dssp TTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSS
T ss_pred CCceEEEECC-C-CcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCC
Confidence 7889999998 4 443222 2334467889999999997777667789999998 4543222 2234467899999 888
Q ss_pred CeEEEE
Q 011924 445 ESLFIG 450 (475)
Q Consensus 445 ~~l~~~ 450 (475)
...++.
T Consensus 278 ~l~v~~ 283 (299)
T 2z2n_A 278 TIWFAM 283 (299)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 755554
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.53 E-value=1.4e-11 Score=116.01 Aligned_cols=231 Identities=11% Similarity=0.047 Sum_probs=154.9
Q ss_pred ceeEEecCCCeEEEe--cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 134 RNLVWATSKHDVYLM--SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 134 r~l~~~~~~~~v~~~--~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
..++|.+..+.++++ .++.|..|+..++ . ..+.. ....+.++++ +++++++...++
T Consensus 31 eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~-~~~~~------------------~~~~~~~l~~~~dg~l~v~~~~~~ 90 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L-SPEMH------------------PSHHQNGHCLNKQGHLIACSHGLR 90 (296)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E-EEEES------------------SCSSEEEEEECTTCCEEEEETTTT
T ss_pred cCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e-EEEEC------------------CCCCcceeeECCCCcEEEEecCCC
Confidence 456677777756554 4578999998766 2 22211 1124677887 677777776678
Q ss_pred eEEEEeCCCCCceEEEeeecC-CCCceeEEEEEeCCCCCeEEEEE----e-------------CCCeEEEEECCCCeeee
Q 011924 210 ELICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSPSGAVHFTAS----N-------------NDCGVRDFDMGKYQLSK 271 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~-~~~~v~~l~~~~s~~g~~~l~s~----s-------------~dg~v~iwd~~~~~~~~ 271 (475)
.|.+|+..+............ ....++.+++ +|+|+. +++. + ..+.|..++.. ++...
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~--d~~G~l-~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCL--APDGSL-WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA 166 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEE--CTTSCE-EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEE--CCCCCE-EEECCccccccccccccccccCCCcEEEEECCC-CCEEE
Confidence 999999865553321111111 1223567888 999974 6652 2 13455555554 44433
Q ss_pred eeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECC-CCce---EEEeecCC
Q 011924 272 HFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSM-TGKT---IASLCGHL 347 (475)
Q Consensus 272 ~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~-~~~~---~~~l~~h~ 347 (475)
........+ .++|+|+|+.+++.+.++.|.+|++. +++. ...+..+.
T Consensus 167 ~~~~~~~~~-----------------------------gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 217 (296)
T 3e5z_A 167 PIRDRVKPN-----------------------------GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEP 217 (296)
T ss_dssp EECCCSSEE-----------------------------EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSS
T ss_pred eecCCCCCc-----------------------------cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCC
Confidence 333444455 89999999999666778899999987 5554 33443455
Q ss_pred CCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEE-ccCCCEEEEEcCCCeEEEEECCCCe
Q 011924 348 DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRY-TSDGRYMATAEPADFVHVYDVKSGY 423 (475)
Q Consensus 348 ~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~-spdg~~la~~~~dg~i~iwd~~~~~ 423 (475)
..+.+++++|+|++.++. ++.|.+||.. ++.+..+..+.. +++++| +|+++.|++++.++ +.-++.++..
T Consensus 218 ~~p~~i~~d~~G~l~v~~--~~~v~~~~~~--g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 218 GKTDGLRVDAGGLIWASA--GDGVHVLTPD--GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp SCCCSEEEBTTSCEEEEE--TTEEEEECTT--SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred CCCCeEEECCCCCEEEEc--CCeEEEECCC--CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 667789999999876666 7889999985 667777877776 899999 68999999888764 6666776654
No 189
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=1.6e-11 Score=115.93 Aligned_cols=217 Identities=12% Similarity=0.078 Sum_probs=150.4
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc-
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP- 276 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~- 276 (475)
++.++++....+.|..|+....... .. .....+.++++ +++|+. +++. +..|.+||..+++........
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~---~~--~~~~~~~~i~~--~~dG~l-~v~~--~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQ---RV--TMDAPVSSVAL--RQSGGY-VATI--GTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEE---EE--ECSSCEEEEEE--BTTSSE-EEEE--TTEEEEEETTTTEEEEEEECCT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE---EE--eCCCceEEEEE--CCCCCE-EEEE--CCeEEEEECCCCcEEEEEecCC
Confidence 3567777778899999998765432 11 22356888888 999983 4443 568999999887654333221
Q ss_pred ----ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC---------CcEEEEECC-CCceEEE
Q 011924 277 ----WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN---------PDGLLVDSM-TGKTIAS 342 (475)
Q Consensus 277 ----~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d---------g~i~iwd~~-~~~~~~~ 342 (475)
..++ .++++|+|+++++.... ....||.+. .++.. .
T Consensus 94 ~~~~~~~~-----------------------------di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~ 143 (297)
T 3g4e_A 94 DKKNNRFN-----------------------------DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-K 143 (297)
T ss_dssp TCSSEEEE-----------------------------EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-E
T ss_pred CCCCCCCC-----------------------------CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-E
Confidence 1234 88999999977654321 233455444 24433 3
Q ss_pred eecCCCCeEEEEEecCCCEEEEE-eCCCeEEEEECC-CCCce-----EEEEecCCCceEEEEEccCCCEEEEEcCCCeEE
Q 011924 343 LCGHLDFSFASAWHPNGVTFATG-NQDKTCRIWDLR-NLSES-----VAVLKGNLGAIRSIRYTSDGRYMATAEPADFVH 415 (475)
Q Consensus 343 l~~h~~~v~~~~~sp~g~~l~t~-s~dg~v~iwd~~-~~~~~-----~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~ 415 (475)
+..+......++|+|+++.|+.+ +.++.|.+||+. ..+.. ...+....+.+..++++++|++.++....+.|.
T Consensus 144 ~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~ 223 (297)
T 3g4e_A 144 YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVI 223 (297)
T ss_dssp EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEE
T ss_pred EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEE
Confidence 33344567899999999877554 557899999974 22332 222233345678999999999888777788999
Q ss_pred EEECCCCeeEEEEeccCCCeEEEEEc-CCCCeEEEEEecC
Q 011924 416 VYDVKSGYEKEQEIDFFGEISGISFS-PDTESLFIGVWDR 454 (475)
Q Consensus 416 iwd~~~~~~~~~~~~~~~~i~~l~fs-pdg~~l~~~~~D~ 454 (475)
+||..+++.+..+..+...+++++|. |+++.|++++...
T Consensus 224 ~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 224 RLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 99998898888877776789999998 8999998887643
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.52 E-value=1.5e-11 Score=117.79 Aligned_cols=242 Identities=8% Similarity=-0.030 Sum_probs=161.5
Q ss_pred CCeEEEec--CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCceEEEEeCC
Q 011924 142 KHDVYLMS--HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLD 217 (475)
Q Consensus 142 ~~~v~~~~--~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~i~vw~~~ 217 (475)
...+|.+. ++.|.+|+..+++....+... .....+++ ++.++++...++.|.+||+.
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~-------------------~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~ 113 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGF-------------------TSPRYIHFLSDEKAYVTQIWDYRIFIINPK 113 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECC-------------------SSEEEEEEEETTEEEEEEBSCSEEEEEETT
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCC-------------------CCCcEEEEeCCCeEEEEECCCCeEEEEECC
Confidence 45566653 478999999888775544210 12345555 56444444489999999988
Q ss_pred CCCceEEEeeec--CCCCceeEEEEEeCCCCCeEEEEEe-CCCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEe
Q 011924 218 RPGVSFCSRTTY--DDNAITNAVEIYGSPSGAVHFTASN-NDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLL 294 (475)
Q Consensus 218 ~~~~~~~~~~~~--~~~~~v~~l~~~~s~~g~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~ 294 (475)
+.........-. ........+++ ++..++++.. .++.|.++|+.+++.+..+.......
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~----~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~-------------- 175 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQ----YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPT-------------- 175 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEE----ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBC--------------
T ss_pred CCeEEEEEEcCCccccCCCcceEEE----ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCcc--------------
Confidence 665442222111 00113445655 3445455554 48899999999999888776544445
Q ss_pred ecccceEEEEeeeeeeEEECCCCcEEEEEeCC----------CcEEEEECCCCceEEEeecC-CCCeEEEEEecCCCEEE
Q 011924 295 NFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN----------PDGLLVDSMTGKTIASLCGH-LDFSFASAWHPNGVTFA 363 (475)
Q Consensus 295 d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d----------g~i~iwd~~~~~~~~~l~~h-~~~v~~~~~sp~g~~l~ 363 (475)
.++++|+|++++++..+ +.|.++|..+++....+... ......++|+|++++|+
T Consensus 176 ---------------~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ly 240 (328)
T 3dsm_A 176 ---------------SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLY 240 (328)
T ss_dssp ---------------CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEE
T ss_pred ---------------ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEE
Confidence 78899999977776544 78999999999887777532 23688999999999998
Q ss_pred EEeCCCeEEEEECCCCCceEE--EEecCCCceEEEEEcc-CCCEEEEE----cCCCeEEEEECCCCeeEEEEeccCCCeE
Q 011924 364 TGNQDKTCRIWDLRNLSESVA--VLKGNLGAIRSIRYTS-DGRYMATA----EPADFVHVYDVKSGYEKEQEIDFFGEIS 436 (475)
Q Consensus 364 t~s~dg~v~iwd~~~~~~~~~--~~~~~~~~v~~l~~sp-dg~~la~~----~~dg~i~iwd~~~~~~~~~~~~~~~~i~ 436 (475)
++.. +|.+||..+ ++... .+.........++++| +++++++. ..++.|.+||.. ++.+..+.. .....
T Consensus 241 v~~~--~v~~~d~~t-~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~ 315 (328)
T 3dsm_A 241 WINN--DIWRMPVEA-DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPG 315 (328)
T ss_dssp EESS--SEEEEETTC-SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEE
T ss_pred EEcc--EEEEEECCC-CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcc
Confidence 8865 899999965 33321 1221235678999999 55665665 567899999987 877766642 33445
Q ss_pred EEEE
Q 011924 437 GISF 440 (475)
Q Consensus 437 ~l~f 440 (475)
.++|
T Consensus 316 ~~~~ 319 (328)
T 3dsm_A 316 AFCW 319 (328)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5555
No 191
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.52 E-value=1.3e-11 Score=116.84 Aligned_cols=233 Identities=13% Similarity=0.181 Sum_probs=156.3
Q ss_pred EEEEE--cCcEEEE-------EecCceEEEEeCCCCCceEEEe-eecCCCCceeEEEEEeCCC-CCeEEEEEeCCCeEEE
Q 011924 193 STLAV--KDKLLVA-------GGFQGELICKHLDRPGVSFCSR-TTYDDNAITNAVEIYGSPS-GAVHFTASNNDCGVRD 261 (475)
Q Consensus 193 ~~l~~--~~~~lvs-------g~~dg~i~vw~~~~~~~~~~~~-~~~~~~~~v~~l~~~~s~~-g~~~l~s~s~dg~v~i 261 (475)
.+++| ++.++++ +..++.|.+|+........... ....+...+..+.+ +++ |. ++++. ....|.+
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~--~~~~g~-l~v~~-~~~~l~~ 96 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQC--DRDANQ-LFVAD-MRLGLLV 96 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEE--CSSSSE-EEEEE-TTTEEEE
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEE--ecCCCc-EEEEE-CCCCEEE
Confidence 46666 6777777 5778999999976555331110 00113345677877 888 65 34444 4457999
Q ss_pred EECCCCeeeee-eecc-----ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC---------
Q 011924 262 FDMGKYQLSKH-FRFP-----WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN--------- 326 (475)
Q Consensus 262 wd~~~~~~~~~-~~~~-----~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d--------- 326 (475)
|+.. ++.... .... ..+. +++++|+|++.++...+
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~-----------------------------~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCN-----------------------------DCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCC-----------------------------EEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred EeCC-CCEEEEEeccCCCccccCCc-----------------------------CEEECCCCCEEEEecCcccccccccc
Confidence 9988 665433 2211 1234 88999999888776554
Q ss_pred ------CcEEEEECCCCceEEEeecCCCCeEEEEEe----cCCCEEEEE-eCCCeEEEEECCCCCc-----eEEEEecCC
Q 011924 327 ------PDGLLVDSMTGKTIASLCGHLDFSFASAWH----PNGVTFATG-NQDKTCRIWDLRNLSE-----SVAVLKGNL 390 (475)
Q Consensus 327 ------g~i~iwd~~~~~~~~~l~~h~~~v~~~~~s----p~g~~l~t~-s~dg~v~iwd~~~~~~-----~~~~~~~~~ 390 (475)
+.|..|+.. ++.... ..+......++|+ |+++.++.+ ..++.|.+||....+. ....+..+.
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 224 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred cccCCCCeEEEECCC-CCEEEe-ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC
Confidence 567777765 554433 3344457889999 999766555 5678999999862232 222233333
Q ss_pred -CceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCcceEEEEE
Q 011924 391 -GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYG 463 (475)
Q Consensus 391 -~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~~~ll~~~ 463 (475)
..+..++++++|+++++...++.|.+||..++..+..+..+...+.+++|+|+|+.|+++..+. +.+..+.
T Consensus 225 ~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~--~~l~~~~ 296 (314)
T 1pjx_A 225 EGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHEN--NAVWKFE 296 (314)
T ss_dssp SCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTT--TEEEEEE
T ss_pred CCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCC--CeEEEEe
Confidence 5678999999999888877788999999887776666666667899999999999888776542 3455554
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=5.8e-12 Score=133.42 Aligned_cols=225 Identities=12% Similarity=0.003 Sum_probs=148.6
Q ss_pred eeEEEEEE--cCcEEEE-----EecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCe----
Q 011924 190 TQVSTLAV--KDKLLVA-----GGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCG---- 258 (475)
Q Consensus 190 ~~v~~l~~--~~~~lvs-----g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~---- 258 (475)
..+.+++| +|++|+. |+.+.+|++|++.+...... .... ......++| +|+|+. |+.++.+..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~--~~~~~~~~w--spDg~~-l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV-DVIE--GGKYATPKW--TPDSKG-FYYEWLPTDPSIK 194 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-CCBS--CCTTCCCEE--CTTSSE-EEEEECCCCTTSC
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-cccC--cccccceEE--ecCCCE-EEEEEecCCCCCc
Confidence 35777777 8998883 44456899999987653200 0111 111256788 999997 666667665
Q ss_pred ---------EEEEECCCCeee--eeee---ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe
Q 011924 259 ---------VRDFDMGKYQLS--KHFR---FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG 324 (475)
Q Consensus 259 ---------v~iwd~~~~~~~--~~~~---~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 324 (475)
|++|++.+++.. ..+. +...+. ++.|||+|++|++++
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~-----------------------------~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL-----------------------------QSDLSRDGKYLFVYI 245 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE-----------------------------EEEECTTSCCEEEEE
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE-----------------------------EEEECCCCCEEEEEE
Confidence 999999876521 2222 234555 889999999998887
Q ss_pred CCC----cEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEe---CCCeEEEEECCCCCc--eEEEEecC-CCceE
Q 011924 325 DNP----DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN---QDKTCRIWDLRNLSE--SVAVLKGN-LGAIR 394 (475)
Q Consensus 325 ~dg----~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s---~dg~v~iwd~~~~~~--~~~~~~~~-~~~v~ 394 (475)
.++ .|++|+..++. ...+..+...+....| |+|.+++++. .++.|.+||+.+... ....+..+ ...+.
T Consensus 246 ~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~ 323 (695)
T 2bkl_A 246 LRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLL 323 (695)
T ss_dssp EETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEE
T ss_pred eCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEE
Confidence 665 67778765554 4455556666777777 5666444444 257899999976321 13333333 44678
Q ss_pred EEEEccCCCEEEEEcCCCeEEEEECC-CCeeEEEEecc-CCCeEEEEEcCCCCeEEEEEe
Q 011924 395 SIRYTSDGRYMATAEPADFVHVYDVK-SGYEKEQEIDF-FGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 395 ~l~~spdg~~la~~~~dg~i~iwd~~-~~~~~~~~~~~-~~~i~~l~fspdg~~l~~~~~ 452 (475)
.++|+ ++.++++...++..+||.+. ++.....+..+ .+.+..++++|++..|+....
T Consensus 324 ~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 382 (695)
T 2bkl_A 324 SVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFT 382 (695)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEE
T ss_pred EEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEc
Confidence 88888 67788888888887777554 35555555444 567888999999988875543
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.51 E-value=3.1e-12 Score=122.53 Aligned_cols=223 Identities=10% Similarity=0.025 Sum_probs=149.1
Q ss_pred EEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCee
Q 011924 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~ 269 (475)
|.++++ ++..++..+.++.++.|. .. . ......+...+..++| +++|+ +++++..++.|.+||..+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~--~~~~~~~~~~~~~~~~--~~~g~-l~~~~~~~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTIT---AE-P--WLEISKKGLQLEGLNF--DRQGQ-LFLLDVFEGNIFKINPETKEI 78 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEEE---CE-E--EEEEESSCCCEEEEEE--CTTSC-EEEEETTTCEEEEECTTTCCE
T ss_pred cceeeecCCccceeEEeecccCcccc---cc-e--eEEEeccCccccCcEE--CCCCC-EEEEECCCCEEEEEeCCCCcE
Confidence 334444 344455556677787772 11 1 2233344555688888 99997 477888889999999988776
Q ss_pred eeee-eccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC----CcEEEEECCCCceEEEee
Q 011924 270 SKHF-RFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN----PDGLLVDSMTGKTIASLC 344 (475)
Q Consensus 270 ~~~~-~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d----g~i~iwd~~~~~~~~~l~ 344 (475)
.... .....+. +++++|+|+++++...+ +.|.+||..+++....+.
T Consensus 79 ~~~~~~~~~~~~-----------------------------~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~ 129 (333)
T 2dg1_A 79 KRPFVSHKANPA-----------------------------AIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE 129 (333)
T ss_dssp EEEEECSSSSEE-----------------------------EEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC
T ss_pred EEEeeCCCCCcc-----------------------------eEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc
Confidence 5544 2445677 99999999988877666 689999998777654443
Q ss_pred --cCCCCeEEEEEecCCCEEEEEeC------CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEE-EcCCCeEE
Q 011924 345 --GHLDFSFASAWHPNGVTFATGNQ------DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMAT-AEPADFVH 415 (475)
Q Consensus 345 --~h~~~v~~~~~sp~g~~l~t~s~------dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~-~~~dg~i~ 415 (475)
.+...+.+++++|+|+++++... .+.|..||... ++ +..+......+..++|+|+|++|+. .+.++.|.
T Consensus 130 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 130 DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF-RT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLH 207 (333)
T ss_dssp SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS-CC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC-CE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEE
Confidence 24457899999999988877654 24566666543 23 3333333345789999999986654 45678999
Q ss_pred EEECCC-CeeEEE-----EeccC--CCeEEEEEcCCCCeEEEEEecC
Q 011924 416 VYDVKS-GYEKEQ-----EIDFF--GEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 416 iwd~~~-~~~~~~-----~~~~~--~~i~~l~fspdg~~l~~~~~D~ 454 (475)
+||+.+ +..... ..... ..+.+++++++|+.+++...++
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~ 254 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG 254 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT
T ss_pred EEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCC
Confidence 999863 332211 11111 3678999999998766654444
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.50 E-value=5.7e-11 Score=121.86 Aligned_cols=217 Identities=14% Similarity=0.036 Sum_probs=152.8
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC--CCeeeeeeec
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG--KYQLSKHFRF 275 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~--~~~~~~~~~~ 275 (475)
.+.++++...++.|.++|..+.+.... +.. ...+..+.+ +|+|++ +++++.++.|.+||+. +++.+..+..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~--i~~--g~~p~~v~~--SpDGr~-lyv~~~dg~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTV--LDT--GYAVHISRL--SASGRY-LFVIGRDGKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEE--EEC--SSCEEEEEE--CTTSCE-EEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEE--EeC--CCCccceEE--CCCCCE-EEEEcCCCeEEEEECCCCCCcEeEEEec
Confidence 445677778899999999987765532 222 223557777 999997 6667799999999996 7777777765
Q ss_pred cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEEC----CCCcEEEEEe-CCCcEEEEECCCCceEEEeec-----
Q 011924 276 PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQS----PDGKLLIIVG-DNPDGLLVDSMTGKTIASLCG----- 345 (475)
Q Consensus 276 ~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~s----p~g~~l~~~~-~dg~i~iwd~~~~~~~~~l~~----- 345 (475)
..... .++|+ |+|+++++++ ..+.+.++|..+.+++..+..
T Consensus 239 G~~P~-----------------------------~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~ 289 (567)
T 1qks_A 239 GSEAR-----------------------------SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTY 289 (567)
T ss_dssp CSEEE-----------------------------EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECT
T ss_pred CCCCc-----------------------------eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccc
Confidence 44455 88999 6999988876 458999999999998887652
Q ss_pred -----CC-CCeEEEEEecCCCEEEE-EeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEE
Q 011924 346 -----HL-DFSFASAWHPNGVTFAT-GNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVY 417 (475)
Q Consensus 346 -----h~-~~v~~~~~sp~g~~l~t-~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iw 417 (475)
|. ..+..+..++++..++. ....|.|.++|....................+.|+|+|++++++. .++.|.++
T Consensus 290 ~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~Vi 369 (567)
T 1qks_A 290 DEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVI 369 (567)
T ss_dssp TTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred ccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEE
Confidence 11 25778888887665544 445799999999753322222222334567889999999876655 57899999
Q ss_pred ECCCCeeEEEEec-----cCCCeEEEEEcCCCCeEEEEE
Q 011924 418 DVKSGYEKEQEID-----FFGEISGISFSPDTESLFIGV 451 (475)
Q Consensus 418 d~~~~~~~~~~~~-----~~~~i~~l~fspdg~~l~~~~ 451 (475)
|+++++....+.. |.+.-..+ ++|++..+++.+
T Consensus 370 D~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~ 407 (567)
T 1qks_A 370 DTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATS 407 (567)
T ss_dssp ETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEE
T ss_pred ECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeC
Confidence 9999987665543 33222222 588765555443
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.48 E-value=1.2e-11 Score=114.56 Aligned_cols=235 Identities=11% Similarity=0.076 Sum_probs=151.7
Q ss_pred cceeEEecCCCeEEE-e--cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEec
Q 011924 133 LRNLVWATSKHDVYL-M--SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF 207 (475)
Q Consensus 133 lr~l~~~~~~~~v~~-~--~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~ 207 (475)
...+.+..+.. +|+ . .++.|..|+..+..... +... ....+.++++ +++++++..
T Consensus 26 p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~-~~~~-----------------~~~~p~~i~~~~~g~l~v~~~- 85 (270)
T 1rwi_B 26 PSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTV-LPFN-----------------GLYQPQGLAVDGAGTVYVTDF- 85 (270)
T ss_dssp EEEEEECTTCC-EEEEECSSSCEEEEECC-----EE-CCCC-----------------SCCSCCCEEECTTCCEEEEET-
T ss_pred ccceEECCCCC-EEEEccCCCCcEEEecCCCcccce-EeeC-----------------CcCCcceeEECCCCCEEEEcC-
Confidence 34454554443 666 4 34778888764433211 1110 0012345666 667666655
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCc
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYC 286 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~ 286 (475)
++.|.+|+....... ............+++ +++|. ++++...++.|.+|+..+........ ....+.
T Consensus 86 ~~~i~~~d~~~~~~~---~~~~~~~~~p~~i~~--~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~------ 153 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQT---VLPFDGLNYPEGLAV--DTQGA-VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPD------ 153 (270)
T ss_dssp TTEEEEECTTCSCCE---ECCCCSCSSEEEEEE--CTTCC-EEEEEGGGTEEEEECTTCCSCEECCCCSCCSCC------
T ss_pred CCEEEEEeCCCceEe---eeecCCcCCCcceEE--CCCCC-EEEEECCCCEEEEEECCCceeEeeccccCCCce------
Confidence 889999997654322 122222345778888 89987 47776678899999765443222111 112334
Q ss_pred eEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEe
Q 011924 287 IILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 366 (475)
Q Consensus 287 ~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s 366 (475)
+++++|+|+++++...++.|.+|+...+........+...+.+++++|+|+++++..
T Consensus 154 -----------------------~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 154 -----------------------GVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp -----------------------CEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEET
T ss_pred -----------------------eEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEEC
Confidence 889999999777777778999999876665443333446789999999998777777
Q ss_pred CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCe
Q 011924 367 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 423 (475)
Q Consensus 367 ~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~ 423 (475)
.++.|.+||... .........+...+.+++++|+|+++++...++.|++|++...+
T Consensus 211 ~~~~v~~~~~~~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 211 NTNQVVKLLAGS-TTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp TTSCEEEECTTC-SCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCcEEEEcCCC-CcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 788999999864 33222222233568899999999988888889999999987543
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.48 E-value=1.1e-10 Score=109.28 Aligned_cols=218 Identities=13% Similarity=0.072 Sum_probs=153.0
Q ss_pred eEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe
Q 011924 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~ 268 (475)
.+.++++ +++++++...++.|.+|+.. .... ..........+..+++ .++|.. +++...++.|..|+.. ++
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~--~~~~~~~~~~~~~i~~--~~~g~l-~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-GKIT--EYPLPTPDAKVMCLTI--SSDGEV-WFTENAANKIGRITKK-GI 88 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE--EEECSSTTCCEEEEEE--CTTSCE-EEEETTTTEEEEECTT-SC
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-CCeE--EecCCcccCceeeEEE--CCCCCE-EEeCCCCCeEEEECCC-Cc
Confidence 5778888 67777666667899999987 3322 1222234456788888 899874 6666568889999986 33
Q ss_pred eeeeee---ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEE-ee
Q 011924 269 LSKHFR---FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS-LC 344 (475)
Q Consensus 269 ~~~~~~---~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~-l~ 344 (475)
. ..+. ....+. +++++|+|+++++...++.|.+||. +++.... +.
T Consensus 89 ~-~~~~~~~~~~~~~-----------------------------~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 137 (299)
T 2z2n_A 89 I-KEYTLPNPDSAPY-----------------------------GITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELP 137 (299)
T ss_dssp E-EEEECSSTTCCEE-----------------------------EEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred E-EEEeCCCcCCCce-----------------------------eeEECCCCCEEEEecCCceEEEECC-CCCEEEecCC
Confidence 2 2232 122344 8899999988887777889999998 6654432 23
Q ss_pred cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEE-EecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCe
Q 011924 345 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAV-LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 423 (475)
Q Consensus 345 ~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~-~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~ 423 (475)
.+...+.+++++|+|++.++...++.|..||. + ++.... +......+..++++++|++.++...++.|.+||. ++.
T Consensus 138 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 138 NKGSYPSFITLGSDNALWFTENQNNAIGRITE-S-GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 34567899999999988887777889999998 4 443332 2334456889999999998777777889999998 665
Q ss_pred eEEE-EeccCCCeEEEEEcCCCCeEEE
Q 011924 424 EKEQ-EIDFFGEISGISFSPDTESLFI 449 (475)
Q Consensus 424 ~~~~-~~~~~~~i~~l~fspdg~~l~~ 449 (475)
.... .......+.+++++++|+..++
T Consensus 215 ~~~~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 215 ITEFKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEEECCCCCCCceeEEECCCCCEEEe
Confidence 4332 1224467899999999984444
No 197
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.48 E-value=1.4e-12 Score=126.48 Aligned_cols=171 Identities=12% Similarity=0.022 Sum_probs=131.9
Q ss_pred ceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe-----------eeeeeeccccEEeccCCceEEEEEEeecccceEE
Q 011924 234 ITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ-----------LSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVI 302 (475)
Q Consensus 234 ~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~-----------~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~ 302 (475)
.++.+++ ++.... +++|+.+ .+.+|++...+ .......+. |.
T Consensus 39 ~~nlLai--s~~~gl-l~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~---------------------- 91 (388)
T 1xip_A 39 SLQNLDI--SNSKSL-FVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VI---------------------- 91 (388)
T ss_dssp CCBCEEE--ETTTTE-EEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EE----------------------
T ss_pred cccEEEE--cCCCCE-EEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-ee----------------------
Confidence 5788999 888875 7777776 56669875432 112333444 66
Q ss_pred EEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCce
Q 011924 303 ICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES 382 (475)
Q Consensus 303 ~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~ 382 (475)
+++| ++++|+++ .++.|++||+++......+..|...+.++.+.+. .+++++.||+|.+||+.+ +..
T Consensus 92 -------~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~-~~~ 158 (388)
T 1xip_A 92 -------FVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRT-KST 158 (388)
T ss_dssp -------EEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTT-CCE
T ss_pred -------EEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccC-Ccc
Confidence 9999 99999999 8899999999877766677778888888877654 388899999999999976 443
Q ss_pred EEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCee--EEEE------e---ccCCCeEEEEEcCCCCeEEEE
Q 011924 383 VAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE--KEQE------I---DFFGEISGISFSPDTESLFIG 450 (475)
Q Consensus 383 ~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~--~~~~------~---~~~~~i~~l~fspdg~~l~~~ 450 (475)
.. +...|++++|||+| ++.|..||.+++|+...+.. ...+ . +|...|.++.|.+++.+|++=
T Consensus 159 ~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 159 KQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 32 33579999999999 67888999999999887764 4444 1 256789999999999888763
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.46 E-value=7.5e-12 Score=132.60 Aligned_cols=225 Identities=11% Similarity=-0.034 Sum_probs=143.4
Q ss_pred EcCcEEEEEecCc-----eEEEEeCCCCCceEEEe---eecCCCCceeEEEEEeCCCCCeEEEEEe----CCCeEEEEEC
Q 011924 197 VKDKLLVAGGFQG-----ELICKHLDRPGVSFCSR---TTYDDNAITNAVEIYGSPSGAVHFTASN----NDCGVRDFDM 264 (475)
Q Consensus 197 ~~~~~lvsg~~dg-----~i~vw~~~~~~~~~~~~---~~~~~~~~v~~l~~~~s~~g~~~l~s~s----~dg~v~iwd~ 264 (475)
.+|++++....++ .|.+.+........... ...+|...+..++| ||+|+.++++.+ .+..|++||+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~--SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAV--SWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEE--CTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEE--CCCCCEEEEEECCCCCceEEEEEEEC
Confidence 4777777665433 34444433332221110 11234446778888 999998555543 3468999999
Q ss_pred CCCeee-eeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCc-------------EE
Q 011924 265 GKYQLS-KHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPD-------------GL 330 (475)
Q Consensus 265 ~~~~~~-~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~-------------i~ 330 (475)
.+++.+ .......... .++|+|||+.|+.++.+.. |+
T Consensus 155 ~tg~~~~~~~~~~~~~~-----------------------------~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~ 205 (695)
T 2bkl_A 155 DSGEWSKVDVIEGGKYA-----------------------------TPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIR 205 (695)
T ss_dssp TTCCBCSSCCBSCCTTC-----------------------------CCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEE
T ss_pred CCCCCcCCcccCccccc-----------------------------ceEEecCCCEEEEEEecCCCCCccccCCCCCEEE
Confidence 998765 2111111113 7799999999999987765 99
Q ss_pred EEECCCCc----eEEEeecCCCCeEEEEEecCCCEEEEEeCCC----eEEEEECCCCCceEEEEecCCCceEEEEEccCC
Q 011924 331 LVDSMTGK----TIASLCGHLDFSFASAWHPNGVTFATGNQDK----TCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402 (475)
Q Consensus 331 iwd~~~~~----~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg----~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg 402 (475)
+|++.++. ++.....|...+.++.|+|+|++|+.++.++ .|.+|+... + ....+..+...+....+ |+|
T Consensus 206 ~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~-~-~~~~l~~~~~~~~~~~~-~~g 282 (695)
T 2bkl_A 206 YHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE-K-DFRLLVKGVGAKYEVHA-WKD 282 (695)
T ss_dssp EEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC-S-SCEEEEECSSCCEEEEE-ETT
T ss_pred EEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC-C-ceEEeecCCCceEEEEe-cCC
Confidence 99998876 3333334556889999999999998887665 566666533 3 34555555556667767 666
Q ss_pred CEEEEEc---CCCeEEEEECCCCee--EEEEecc--CCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 403 RYMATAE---PADFVHVYDVKSGYE--KEQEIDF--FGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 403 ~~la~~~---~dg~i~iwd~~~~~~--~~~~~~~--~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
++++.+. .++.|.+||+.++.. ...+..+ ...+.+++|+ ++..+++...|+..
T Consensus 283 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~ 342 (695)
T 2bkl_A 283 RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATS 342 (695)
T ss_dssp EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEE
T ss_pred cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEE
Confidence 6444443 257899999987642 2344433 3458889998 66666677766654
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.46 E-value=4.8e-11 Score=117.93 Aligned_cols=226 Identities=10% Similarity=0.048 Sum_probs=149.7
Q ss_pred eEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCC--eEEEEECCC
Q 011924 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC--GVRDFDMGK 266 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg--~v~iwd~~~ 266 (475)
....|++ +++++++...++.|++|++...... .+..... ... ++| +++++. ++++..++ .|.+|+...
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~---~~~~~~~-~~~-ia~--~~~g~~-l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT---TVHPGFK-GGK-PAV--TKDKQR-VYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE---EEEETCC-BCB-CEE--CTTSSE-EEEEBSSTTCEEEEEEGGG
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE---EeeccCC-CCc-eeE--ecCCCc-EEEEecCCCceEEEEEcCC
Confidence 4567777 6777777777899999998754433 2222222 223 777 999986 55555544 788888865
Q ss_pred Ceeeeee----e-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEE
Q 011924 267 YQLSKHF----R-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIA 341 (475)
Q Consensus 267 ~~~~~~~----~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~ 341 (475)
+.....+ . ....+. +++++|++..|+++..++.|+.||..++....
T Consensus 204 ~~~~~~~g~~~~~~~~~p~-----------------------------~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIG-----------------------------AVALDETEEWLYFVDSNKNFGRFNVKTQEVTL 254 (409)
T ss_dssp TTCEEEEEECCTTSCSCCC-----------------------------BCEECTTSSEEEEECTTCEEEEEETTTCCEEE
T ss_pred CceeEEeeeccchhcCCcE-----------------------------EEEEeCCCCeEEEEECCCcEEEEECCCCCEEE
Confidence 5433333 1 222334 88999954455557778899999998776432
Q ss_pred E----eecCCCCe-E-EEEEecC-CCEEEEEeCCCeEEEEECCCCCceEEEEecCC---------------CceEEEEEc
Q 011924 342 S----LCGHLDFS-F-ASAWHPN-GVTFATGNQDKTCRIWDLRNLSESVAVLKGNL---------------GAIRSIRYT 399 (475)
Q Consensus 342 ~----l~~h~~~v-~-~~~~sp~-g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~---------------~~v~~l~~s 399 (475)
. ..++.... . .++|+|+ +.++++-...++|+.|+... . +..+.++. .....++++
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d 331 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVD 331 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEe
Confidence 2 22222222 3 8999994 66666666788999999853 2 33343332 347899999
Q ss_pred cCCCEEEEEc-CCCeEEEEECCCCeeEEEEecc---------------CCCeEEEEEcCCCCeEEEEEecCCcc
Q 011924 400 SDGRYMATAE-PADFVHVYDVKSGYEKEQEIDF---------------FGEISGISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 400 pdg~~la~~~-~dg~i~iwd~~~~~~~~~~~~~---------------~~~i~~l~fspdg~~l~~~~~D~~~~ 457 (475)
|+|+++++-+ .++.|+.|++.++.. ..+.++ ...+.+++++|+|..+++-..+..+.
T Consensus 332 ~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir 404 (409)
T 3hrp_A 332 EDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIR 404 (409)
T ss_dssp TTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEE
T ss_pred CCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEE
Confidence 9999777777 889999999888864 344433 34689999999976555555554443
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.46 E-value=7.5e-12 Score=116.82 Aligned_cols=170 Identities=10% Similarity=0.065 Sum_probs=137.4
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeeeeccc--cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC
Q 011924 249 HFTASNNDCGVRDFDMGKYQLSKHFRFPW--PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN 326 (475)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~--~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d 326 (475)
+|++++.++.|.+||.++++.+..+.... .+. +++++|+|++++ +.+
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~-----------------------------~~~~~pdG~ilv--s~~ 55 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECN-----------------------------SVAATKAGEILF--SYS 55 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCC-----------------------------EEEECTTSCEEE--ECB
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCc-----------------------------CeEECCCCCEEE--eCC
Confidence 58999999999999999999998888543 466 889999999888 356
Q ss_pred CcEEEEECCCCceEEEeecCC-CCeEEEEEecCCCEEEEEeC-CCeEEEEECCCCCceEEEEec------CCCceEEEEE
Q 011924 327 PDGLLVDSMTGKTIASLCGHL-DFSFASAWHPNGVTFATGNQ-DKTCRIWDLRNLSESVAVLKG------NLGAIRSIRY 398 (475)
Q Consensus 327 g~i~iwd~~~~~~~~~l~~h~-~~v~~~~~sp~g~~l~t~s~-dg~v~iwd~~~~~~~~~~~~~------~~~~v~~l~~ 398 (475)
+.|..||. +|+.+..+..+. ..+.++.+.|+|+++++.+. ++.|..+|. . ++.+..+.. +......+++
T Consensus 56 ~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~-Gk~l~~~~~~~~~~~~~~~~~~v~~ 132 (276)
T 3no2_A 56 KGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-K-GEVLSKTEFETGIERPHAQFRQINK 132 (276)
T ss_dssp SEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-T-SCEEEEEEECCSCSSGGGSCSCCEE
T ss_pred CCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-C-CCEEEEEeccCCCCcccccccCceE
Confidence 78999998 899999998653 57889999999999999887 778888876 3 666666542 1124556788
Q ss_pred ccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecC
Q 011924 399 TSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 399 spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
.++|++|++...++.|..||.+ |+.+.++... +.+.++.+.++|+.|+++..++
T Consensus 133 ~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~ 186 (276)
T 3no2_A 133 NKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAH 186 (276)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTS
T ss_pred CCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCC
Confidence 9999999999999999999987 9888777653 4566788899999888775554
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.44 E-value=6e-10 Score=108.55 Aligned_cols=245 Identities=11% Similarity=-0.020 Sum_probs=162.1
Q ss_pred cCcEEEEEec--Cc---eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEe---------CCCeEEEEE
Q 011924 198 KDKLLVAGGF--QG---ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN---------NDCGVRDFD 263 (475)
Q Consensus 198 ~~~~lvsg~~--dg---~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s---------~dg~v~iwd 263 (475)
+++++++... .+ .|.++|..+.+.. ........+ .+.+ +|+|+.++++.. .++.|.+||
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~---~~i~~g~~p--~i~~--spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGSGSIL---GHVNGGFLP--NPVA--AHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCCCeEE---EEecCCCCC--CeEE--CCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 5555555432 22 7899998866543 222222222 7777 999998555542 367899999
Q ss_pred CCCCeeeeeeec-----------cccEEeccCCceEE--------EEEEeecccceEEEE-eeeeeeEEECCCC-cEEEE
Q 011924 264 MGKYQLSKHFRF-----------PWPVNVSSSYCIIL--------LCRLLNFMTEKVIIC-LLCLQHSSQSPDG-KLLII 322 (475)
Q Consensus 264 ~~~~~~~~~~~~-----------~~~v~~s~~~~~l~--------~~~v~d~~~~~~~~~-~~~i~~~~~sp~g-~~l~~ 322 (475)
..+.+.+..+.. +..+.++|+++.+. .+.++| .+++.... ...-.|+.+.|++ +.+++
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~ 182 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYL 182 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEE
Confidence 998887776542 44677999998774 467889 88887766 4433456666755 45566
Q ss_pred EeCCCcEEEEECCCCceEEEee-----cCCCCe-EEEEEecCCCEEEEEeCCCeEEEEECCCCC-ceEEEEec-------
Q 011924 323 VGDNPDGLLVDSMTGKTIASLC-----GHLDFS-FASAWHPNGVTFATGNQDKTCRIWDLRNLS-ESVAVLKG------- 388 (475)
Q Consensus 323 ~~~dg~i~iwd~~~~~~~~~l~-----~h~~~v-~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~-~~~~~~~~------- 388 (475)
.+.+|.+.++|. +++.+.... ....++ ....+.+++..++..+..+.+.+.|+.... ..+..+..
T Consensus 183 ~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~ 261 (373)
T 2mad_H 183 LCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKA 261 (373)
T ss_pred EcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccc
Confidence 678899999999 887764332 112222 234567766555555577899999986422 12222211
Q ss_pred ---CCCceEEEEEccCCCEEEEEcC----------CCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCC-eEEEEEe
Q 011924 389 ---NLGAIRSIRYTSDGRYMATAEP----------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE-SLFIGVW 452 (475)
Q Consensus 389 ---~~~~v~~l~~spdg~~la~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~-~l~~~~~ 452 (475)
.......++++|+++.|+++.. .+.|.++|+.+++.+..+. ..+...+++|+|||+ .|+++.+
T Consensus 262 ~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~ 338 (373)
T 2mad_H 262 DTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSA 338 (373)
T ss_pred cceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcC
Confidence 1123445889999988877643 3579999999998887774 445689999999999 6777664
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.43 E-value=2.7e-11 Score=129.20 Aligned_cols=229 Identities=8% Similarity=-0.073 Sum_probs=142.1
Q ss_pred EEEEcCcEEEEEecCce---EEEEeCCC-----CCceEEE---eeecCCCCceeEEEEEeCCCCCeEEEEEeCCC----e
Q 011924 194 TLAVKDKLLVAGGFQGE---LICKHLDR-----PGVSFCS---RTTYDDNAITNAVEIYGSPSGAVHFTASNNDC----G 258 (475)
Q Consensus 194 ~l~~~~~~lvsg~~dg~---i~vw~~~~-----~~~~~~~---~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg----~ 258 (475)
....+|++++....++. -.+|.... ....... .+..++...+..+.| ||+|+.++++.+..| .
T Consensus 113 ~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~--SPDG~~la~~~~~~G~e~~~ 190 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAA--SDDGRLLAYSVQDGGSDWRT 190 (741)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEE--CTTSSEEEEEEEETTCSEEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEE--CCCCCEEEEEEcCCCCceEE
Confidence 33468888776654432 44454432 2222100 012223335677788 999998555554434 5
Q ss_pred EEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCc----------
Q 011924 259 VRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPD---------- 328 (475)
Q Consensus 259 v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~---------- 328 (475)
|++||+.+++.+........+. .++|+|| +.|+.++.++.
T Consensus 191 i~v~dl~tg~~~~~~~~~~~~~-----------------------------~~~wspD-~~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 191 VKFVGVADGKPLADELKWVKFS-----------------------------GLAWLGN-DALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp EEEEETTTCCEEEEEEEEEESC-----------------------------CCEESTT-SEEEEEECCCC--------CC
T ss_pred EEEEECCCCCCCCccCCCceec-----------------------------cEEEECC-CEEEEEEecCcccccccccCC
Confidence 9999999988754321111123 6789999 98888876543
Q ss_pred ----EEEEECCCCce--EEEee--cCCCCeEEEEEecCCCEEEEEeCCC-----eEEEEECCCCCce-EEEEecCCCceE
Q 011924 329 ----GLLVDSMTGKT--IASLC--GHLDFSFASAWHPNGVTFATGNQDK-----TCRIWDLRNLSES-VAVLKGNLGAIR 394 (475)
Q Consensus 329 ----i~iwd~~~~~~--~~~l~--~h~~~v~~~~~sp~g~~l~t~s~dg-----~v~iwd~~~~~~~-~~~~~~~~~~v~ 394 (475)
|++|++.++.. ...+. .+...+..+.|+|||++|+..+.++ .|.+||+...... ...+..+...+.
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 320 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW 320 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE
T ss_pred CCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE
Confidence 88999887752 22333 2334688999999999998877544 8999999763112 555655555555
Q ss_pred EEEEccCCCEEEEEcC----CCeEEEEECCCC-eeEEEEe-ccCCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 395 SIRYTSDGRYMATAEP----ADFVHVYDVKSG-YEKEQEI-DFFGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 395 ~l~~spdg~~la~~~~----dg~i~iwd~~~~-~~~~~~~-~~~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
... +|+|+.|+..+. ++.|.+||+.++ .....+. .+...+.+++|+ ++..+++...|+..
T Consensus 321 ~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~ 386 (741)
T 1yr2_A 321 DFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKS 386 (741)
T ss_dssp EEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEE
T ss_pred EEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEE
Confidence 553 589998888765 346999999875 2333343 344556778887 45556666666543
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=1.4e-09 Score=105.85 Aligned_cols=266 Identities=9% Similarity=-0.081 Sum_probs=166.9
Q ss_pred cCCCeEEEecC--C----eEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEe-------
Q 011924 140 TSKHDVYLMSH--F----SVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG------- 206 (475)
Q Consensus 140 ~~~~~v~~~~~--~----~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~------- 206 (475)
++.+.+|.+.. . .|..++..+++....+... . .+=..++.++++|+++.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-----------------~-~p~i~~spDg~~lyv~n~~~~~~~ 91 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-----------------F-LPNPVAAHSGSEFALASTSFSRIA 91 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC-----------------C-CCCeEECCCCCEEEEEeccccccc
Confidence 44455555432 2 6788888776654332211 0 11124455888888875
Q ss_pred ---cCceEEEEeCCCCCceEEEeee-cCC---CCceeEEEEEeCCCCCeEEEEEeC-CCeEEEEECCCCeeeee-eeccc
Q 011924 207 ---FQGELICKHLDRPGVSFCSRTT-YDD---NAITNAVEIYGSPSGAVHFTASNN-DCGVRDFDMGKYQLSKH-FRFPW 277 (475)
Q Consensus 207 ---~dg~i~vw~~~~~~~~~~~~~~-~~~---~~~v~~l~~~~s~~g~~~l~s~s~-dg~v~iwd~~~~~~~~~-~~~~~ 277 (475)
.++.|.++|..+.+......+. ... ...-..+.+ +|+|++++++... ++.|.++| .+++.+.. +..+.
T Consensus 92 rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~--spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~ 168 (373)
T 2mad_H 92 KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNAN--TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT 168 (373)
T ss_pred cCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEE--CCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc
Confidence 3678999999765544222221 000 112235667 9999985555433 58899999 99998888 76655
Q ss_pred cEEeccCCceE-------EEEEEeecccceEEEEee----------eeeeEEECCCCcEEEEEeCCCcEEEEECCCCc--
Q 011924 278 PVNVSSSYCII-------LLCRLLNFMTEKVIICLL----------CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGK-- 338 (475)
Q Consensus 278 ~v~~s~~~~~l-------~~~~v~d~~~~~~~~~~~----------~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~-- 338 (475)
.+.+.+.+... +.+.+++. +++...... ......+.+++..++..+..+.+.+.|+.++.
T Consensus 169 ~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~ 247 (373)
T 2mad_H 169 CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT 247 (373)
T ss_pred eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce
Confidence 55555544322 13455666 555442211 01234566666655555577899999987553
Q ss_pred eEEEeec----------CCCCeEEEEEecCCCEEEEEeC----------CCeEEEEECCCCCceEEEEecCCCceEEEEE
Q 011924 339 TIASLCG----------HLDFSFASAWHPNGVTFATGNQ----------DKTCRIWDLRNLSESVAVLKGNLGAIRSIRY 398 (475)
Q Consensus 339 ~~~~l~~----------h~~~v~~~~~sp~g~~l~t~s~----------dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~ 398 (475)
.+..+.- .......++++|+++.++++.. .+.|.++|+.+ .+.+..+... ....+++|
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~g-~~p~~i~~ 325 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISLG-HDVDAISV 325 (373)
T ss_pred EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEECC-CCcCeEEE
Confidence 2222221 1223445789999988887654 35799999976 7777777643 35789999
Q ss_pred ccCCC-EEEEEc-CCCeEEEEECCCCeeEEEEe
Q 011924 399 TSDGR-YMATAE-PADFVHVYDVKSGYEKEQEI 429 (475)
Q Consensus 399 spdg~-~la~~~-~dg~i~iwd~~~~~~~~~~~ 429 (475)
+|||+ .|+++. .++.|.+||+.+++.+..+.
T Consensus 326 s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~ 358 (373)
T 2mad_H 326 AQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV 358 (373)
T ss_pred CCCCCeEEEEEcCCCCeEEEEECCCCCEEeeec
Confidence 99999 777777 48999999999998887744
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=1.4e-09 Score=101.74 Aligned_cols=258 Identities=10% Similarity=0.014 Sum_probs=167.5
Q ss_pred eeEEecCCCeEEEec--CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCce
Q 011924 135 NLVWATSKHDVYLMS--HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGE 210 (475)
Q Consensus 135 ~l~~~~~~~~v~~~~--~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~ 210 (475)
.+..... ..+++.. ++.|..++.. ++... +.+.. ....+.++++ +++++++...++.
T Consensus 24 ~i~~d~~-g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~----------------~~~~~~~i~~~~~g~l~v~~~~~~~ 84 (300)
T 2qc5_A 24 GITSSED-GKVWFTQHKANKISSLDQS-GRIKE-FEVPT----------------PDAKVMCLIVSSLGDIWFTENGANK 84 (300)
T ss_dssp EEEECTT-SCEEEEETTTTEEEEECTT-SCEEE-EECSS----------------TTCCEEEEEECTTSCEEEEETTTTE
T ss_pred eeeECCC-CCEEEEcCCCCeEEEECCC-CceEE-EECCC----------------CCCcceeEEECCCCCEEEEecCCCe
Confidence 3333333 4466653 4788888866 44332 21110 1124667777 5677777666788
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeee-ee-ccccEEeccCCceE
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKH-FR-FPWPVNVSSSYCII 288 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~-~~-~~~~v~~s~~~~~l 288 (475)
|..++.. .... ..........+..+++ .++|.. +++...++.|..|+.. ++.... +. ....+.
T Consensus 85 v~~~d~~-g~~~--~~~~~~~~~~~~~i~~--~~~g~l-~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~-------- 149 (300)
T 2qc5_A 85 IGKLSKK-GGFT--EYPLPQPDSGPYGITE--GLNGDI-WFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPA-------- 149 (300)
T ss_dssp EEEECTT-SCEE--EEECSSTTCCEEEEEE--CSTTCE-EEEETTTTEEEEECTT-SCEEEEECSSTTCCEE--------
T ss_pred EEEECCC-CCeE--EecCCCCCCCCccceE--CCCCCE-EEEccCCCeEEEECCC-CCEEEccCCCCCCCce--------
Confidence 9999876 3322 1222223355778888 888874 6666667899999987 554321 11 123344
Q ss_pred EEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEE-eecCCCCeEEEEEecCCCEEEEEeC
Q 011924 289 LLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS-LCGHLDFSFASAWHPNGVTFATGNQ 367 (475)
Q Consensus 289 ~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~-l~~h~~~v~~~~~sp~g~~l~t~s~ 367 (475)
++++.++|++.++...++.|..++. +++.... +..+...+.+++++|+|++.++...
T Consensus 150 ---------------------~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 150 ---------------------FITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp ---------------------EEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred ---------------------eEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccC
Confidence 8899999997776666788999998 5655432 2234467899999999987777767
Q ss_pred CCeEEEEECCCCCceEEE-EecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEE-EeccCCCeEEEEEcCCCC
Q 011924 368 DKTCRIWDLRNLSESVAV-LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ-EIDFFGEISGISFSPDTE 445 (475)
Q Consensus 368 dg~v~iwd~~~~~~~~~~-~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~-~~~~~~~i~~l~fspdg~ 445 (475)
.+.|.+||. . +..... +......+.+++++++|++.++...++.|..||. ++..... .......+.+++++++|+
T Consensus 208 ~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~ 284 (300)
T 2qc5_A 208 GNKIGRITT-T-GEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGS 284 (300)
T ss_dssp TTEEEEECT-T-CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSC
T ss_pred CCEEEEEcC-C-CcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCC
Confidence 788999998 3 343332 3334457889999999997777766789999998 4543322 222345789999999987
Q ss_pred eEEEEEe
Q 011924 446 SLFIGVW 452 (475)
Q Consensus 446 ~l~~~~~ 452 (475)
. +++..
T Consensus 285 l-~v~~~ 290 (300)
T 2qc5_A 285 V-WFALK 290 (300)
T ss_dssp E-EEECS
T ss_pred E-EEEcc
Confidence 4 44443
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.42 E-value=2.1e-10 Score=122.43 Aligned_cols=223 Identities=15% Similarity=0.076 Sum_probs=146.6
Q ss_pred eEEEEEE--cCcEEEEEecC-----ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCC------
Q 011924 191 QVSTLAV--KDKLLVAGGFQ-----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC------ 257 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~d-----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg------ 257 (475)
.+..++| +|++|+.+..+ .+|++|++.+..... ... +...+..++| +|+ +. |+.++.++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~--~~~--~~~~~~~~~w--spD-~~-l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA--DEL--KWVKFSGLAW--LGN-DA-LLYSRFAEPKEGQA 235 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE--EEE--EEEESCCCEE--STT-SE-EEEEECCCC-----
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC--ccC--CCceeccEEE--ECC-CE-EEEEEecCcccccc
Confidence 5667777 89998877654 469999998766432 111 1111246778 999 87 44444544
Q ss_pred --------eEEEEECCCCee--eeeeec---cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe
Q 011924 258 --------GVRDFDMGKYQL--SKHFRF---PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG 324 (475)
Q Consensus 258 --------~v~iwd~~~~~~--~~~~~~---~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 324 (475)
.|++|++.+++. ...+.. +..+. .+.|||+|++|+..+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~-----------------------------~~~~SpDG~~l~~~~ 286 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH-----------------------------GASVSSDGRWVVITS 286 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE-----------------------------EEEECTTSCEEEEEE
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE-----------------------------EEEECCCCCEEEEEE
Confidence 388889876542 122221 12345 889999999988877
Q ss_pred CCC-----cEEEEECCCC--ceEEEeecCCCCeEEEEEecCCCEEEEEeCC----CeEEEEECCCC-CceEEEEecCCCc
Q 011924 325 DNP-----DGLLVDSMTG--KTIASLCGHLDFSFASAWHPNGVTFATGNQD----KTCRIWDLRNL-SESVAVLKGNLGA 392 (475)
Q Consensus 325 ~dg-----~i~iwd~~~~--~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~d----g~v~iwd~~~~-~~~~~~~~~~~~~ 392 (475)
.++ .|++||+.++ +....+..+...+.... +|+|+.|+..+.+ +.|.+||+... ......+..+...
T Consensus 287 ~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~ 365 (741)
T 1yr2_A 287 SEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN 365 (741)
T ss_dssp ECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE
T ss_pred EccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe
Confidence 543 8999999877 41456666665565553 5889888887753 45999998653 2334444445556
Q ss_pred eEEEEEccCCCEEEEEcCCCeEEEEECC-CCeeEEEEec-cCCCeEEEEEcCCCCeEEEEEe
Q 011924 393 IRSIRYTSDGRYMATAEPADFVHVYDVK-SGYEKEQEID-FFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 393 v~~l~~spdg~~la~~~~dg~i~iwd~~-~~~~~~~~~~-~~~~i~~l~fspdg~~l~~~~~ 452 (475)
+..+.|+ ++.++++...++..+||.+. ++.....+.. ..+.+..+.++|++..|+....
T Consensus 366 l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 366 LESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp EEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEE
T ss_pred EEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEc
Confidence 6677887 56677888888876666543 4555555443 3577899999999987775543
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.41 E-value=5e-10 Score=107.10 Aligned_cols=213 Identities=16% Similarity=0.082 Sum_probs=144.6
Q ss_pred CcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc--
Q 011924 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP-- 276 (475)
Q Consensus 199 ~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-- 276 (475)
+.+++++...+.|..|+....... ... ....+.++.+ +++|+. +++. . ..|.+||..+++........
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~---~~~--~~~~v~~i~~--~~dg~l-~v~~-~-~gl~~~d~~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKT---VHA--LPFMGSALAK--ISDSKQ-LIAS-D-DGLFLRDTATGVLTLHAELESD 130 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEE---EEE--CSSCEEEEEE--EETTEE-EEEE-T-TEEEEEETTTCCEEEEECSSTT
T ss_pred CEEEEEECCCCEEEEEECCCCcEE---EEE--CCCcceEEEE--eCCCeE-EEEE-C-CCEEEEECCCCcEEEEeeCCCC
Confidence 556777778899999998754322 111 2346788888 889874 4443 3 45999999887654332211
Q ss_pred ---ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC------CCcEEEEECCCCceEEEeecCC
Q 011924 277 ---WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD------NPDGLLVDSMTGKTIASLCGHL 347 (475)
Q Consensus 277 ---~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~------dg~i~iwd~~~~~~~~~l~~h~ 347 (475)
..++ .++++|+|+++++... .+.|..++ +++.. .+..+.
T Consensus 131 ~~~~~~~-----------------------------~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~ 178 (326)
T 2ghs_A 131 LPGNRSN-----------------------------DGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADI 178 (326)
T ss_dssp CTTEEEE-----------------------------EEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEE
T ss_pred CCCCCCC-----------------------------CEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCC
Confidence 2344 8899999997765532 24566666 45543 333334
Q ss_pred CCeEEEEEecCCCEEEEE-eCCCeEEEEECC-CCC-c-----eEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEEC
Q 011924 348 DFSFASAWHPNGVTFATG-NQDKTCRIWDLR-NLS-E-----SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDV 419 (475)
Q Consensus 348 ~~v~~~~~sp~g~~l~t~-s~dg~v~iwd~~-~~~-~-----~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~ 419 (475)
.....++|+|+++.++.+ +.++.|.+||+. ..+ . ....+......+..++++++|++.++...++.|.+||.
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 457889999999877655 457899999985 123 2 12222233456778999999997777766788999997
Q ss_pred CCCeeEEEEeccCCCeEEEEEc-CCCCeEEEEEecC
Q 011924 420 KSGYEKEQEIDFFGEISGISFS-PDTESLFIGVWDR 454 (475)
Q Consensus 420 ~~~~~~~~~~~~~~~i~~l~fs-pdg~~l~~~~~D~ 454 (475)
++..+..+..+...+.+++|+ |++..|++++...
T Consensus 259 -~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 259 -DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 566666666666679999998 9999888876654
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.40 E-value=8.7e-10 Score=103.23 Aligned_cols=219 Identities=10% Similarity=0.025 Sum_probs=152.3
Q ss_pred eEEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe
Q 011924 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~ 268 (475)
.+.++++ ++++.++...++.|.+++.. .... ..........+..+++ .++|.. +++...++.|..||.. ++
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~--~~~~~~~~~~~~~i~~--~~~g~l-~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK--EFEVPTPDAKVMCLIV--SSLGDI-WFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE--EEECSSTTCCEEEEEE--CTTSCE-EEEETTTTEEEEECTT-SC
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-CceE--EEECCCCCCcceeEEE--CCCCCE-EEEecCCCeEEEECCC-CC
Confidence 4667777 67777777678999999977 3322 1222233356778888 888874 6666567889999987 55
Q ss_pred eeeeeec---cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEE-Eee
Q 011924 269 LSKHFRF---PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIA-SLC 344 (475)
Q Consensus 269 ~~~~~~~---~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~-~l~ 344 (475)
.. .+.. ...+. ++++.++|+++++...++.|..++.. ++... .+.
T Consensus 94 ~~-~~~~~~~~~~~~-----------------------------~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 142 (300)
T 2qc5_A 94 FT-EYPLPQPDSGPY-----------------------------GITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLP 142 (300)
T ss_dssp EE-EEECSSTTCCEE-----------------------------EEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECS
T ss_pred eE-EecCCCCCCCCc-----------------------------cceECCCCCEEEEccCCCeEEEECCC-CCEEEccCC
Confidence 43 3321 23445 88999999988877667889999987 65542 233
Q ss_pred cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEE-EecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCe
Q 011924 345 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAV-LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 423 (475)
Q Consensus 345 ~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~-~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~ 423 (475)
.....+.++++.|++++.++...++.|..||. . ++.... .......+..++++++|++.++....+.|.+|+. ++.
T Consensus 143 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 143 NKGSYPAFITLGSDNALWFTENQNNSIGRITN-T-GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE 219 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCCCCceeEEECCCCCEEEEecCCCeEEEECC-C-CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence 34567899999999997777666789999998 4 343332 2233456889999999988777777788999998 554
Q ss_pred eEEE-EeccCCCeEEEEEcCCCCeEEEE
Q 011924 424 EKEQ-EIDFFGEISGISFSPDTESLFIG 450 (475)
Q Consensus 424 ~~~~-~~~~~~~i~~l~fspdg~~l~~~ 450 (475)
.... .......+.+++++++|+..++.
T Consensus 220 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 220 ISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EEEEECCCCCCCceEEEECCCCCEEEec
Confidence 3332 22345678999999999844443
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.40 E-value=4.9e-10 Score=105.95 Aligned_cols=236 Identities=8% Similarity=0.040 Sum_probs=150.2
Q ss_pred cceeEEecCCCeEEEe---------cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcE
Q 011924 133 LRNLVWATSKHDVYLM---------SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKL 201 (475)
Q Consensus 133 lr~l~~~~~~~~v~~~---------~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~ 201 (475)
...+.|..+. .+|+. .++.|..|+..+++...+.. +.. ......+.++++ ++..
T Consensus 20 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~------~~~--------~~~~~~~~~i~~~~~~g~ 84 (314)
T 1pjx_A 20 AEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK------PEV--------NGYGGIPAGCQCDRDANQ 84 (314)
T ss_dssp CEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEEC------CEE--------TTEECCEEEEEECSSSSE
T ss_pred ccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe------ccc--------CCCCCCCceEEEecCCCc
Confidence 3455566444 45554 35789999877666543221 000 001124677888 4134
Q ss_pred EEEEecCceEEEEeCCCCCceEEEee-ec----CCCCceeEEEEEeCCCCCeEEEEEeCC---------------CeEEE
Q 011924 202 LVAGGFQGELICKHLDRPGVSFCSRT-TY----DDNAITNAVEIYGSPSGAVHFTASNND---------------CGVRD 261 (475)
Q Consensus 202 lvsg~~dg~i~vw~~~~~~~~~~~~~-~~----~~~~~v~~l~~~~s~~g~~~l~s~s~d---------------g~v~i 261 (475)
|..++..+.|.+|+.. .... .. .. .....++.+++ +++|.. +++...+ +.|..
T Consensus 85 l~v~~~~~~l~~~d~~-g~~~---~~~~~~~~~~~~~~~~~i~~--d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 85 LFVADMRLGLLVVQTD-GTFE---EIAKKDSEGRRMQGCNDCAF--DYEGNL-WITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp EEEEETTTEEEEEETT-SCEE---ECCSBCTTSCBCBCCCEEEE--CTTSCE-EEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred EEEEECCCCEEEEeCC-CCEE---EEEeccCCCccccCCcCEEE--CCCCCE-EEEecCcccccccccccccCCCCeEEE
Confidence 4444445578889987 3322 12 11 11234778888 999975 5555443 56777
Q ss_pred EECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEEC----CCCcEEEEE-eCCCcEEEEECC-
Q 011924 262 FDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQS----PDGKLLIIV-GDNPDGLLVDSM- 335 (475)
Q Consensus 262 wd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~s----p~g~~l~~~-~~dg~i~iwd~~- 335 (475)
|+.. ++............ .++++ |+|+.+.++ ..++.|.+|++.
T Consensus 158 ~~~~-g~~~~~~~~~~~~~-----------------------------~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~ 207 (314)
T 1pjx_A 158 FTTD-GQMIQVDTAFQFPN-----------------------------GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG 207 (314)
T ss_dssp ECTT-SCEEEEEEEESSEE-----------------------------EEEEEECTTSCEEEEEEEETTTTEEEEEEEEE
T ss_pred ECCC-CCEEEeccCCCCcc-----------------------------eEEEecccCCCCCEEEEEECCCCeEEEEECCC
Confidence 7765 44433333223344 78899 999766555 467889999976
Q ss_pred CCc-----eEEEeecCC-CCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEE-E
Q 011924 336 TGK-----TIASLCGHL-DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMAT-A 408 (475)
Q Consensus 336 ~~~-----~~~~l~~h~-~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~-~ 408 (475)
+++ ....+.++. ..+..++++++|+++++...++.|.+||..+ ++.+..+..+...+.+++|+|+|+.|++ .
T Consensus 208 ~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 208 PAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp TTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEEEEe
Confidence 454 223334443 5688999999999888888889999999864 4555666666678899999999995554 4
Q ss_pred cCCCeEEEEECCC
Q 011924 409 EPADFVHVYDVKS 421 (475)
Q Consensus 409 ~~dg~i~iwd~~~ 421 (475)
..++.|..|++..
T Consensus 287 ~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 287 HENNAVWKFEWQR 299 (314)
T ss_dssp TTTTEEEEEECSS
T ss_pred CCCCeEEEEeCCC
Confidence 5567899999864
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.37 E-value=8.1e-10 Score=106.74 Aligned_cols=277 Identities=13% Similarity=0.061 Sum_probs=175.7
Q ss_pred ecCCCeEEEec------CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEe------
Q 011924 139 ATSKHDVYLMS------HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG------ 206 (475)
Q Consensus 139 ~~~~~~v~~~~------~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~------ 206 (475)
.++.+.+|.+. .+.|...+..+.+....+... .. .. ..++.++++|+++.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG----------------~~-P~-va~spDG~~lyVan~~~~r~ 102 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG----------------FL-PN-PVVADDGSFIAHASTVFSRI 102 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC----------------SS-CE-EEECTTSSCEEEEEEEEEET
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC----------------CC-Cc-EEECCCCCEEEEEccccccc
Confidence 45566677753 357888898887765554431 01 12 34445888777665
Q ss_pred ----cCceEEEEeCCCCCceEEEeeecCC----CCceeEEEEEeCCCCCeEEEEEeC-CCeEEEEECCCCeeeeeeeccc
Q 011924 207 ----FQGELICKHLDRPGVSFCSRTTYDD----NAITNAVEIYGSPSGAVHFTASNN-DCGVRDFDMGKYQLSKHFRFPW 277 (475)
Q Consensus 207 ----~dg~i~vw~~~~~~~~~~~~~~~~~----~~~v~~l~~~~s~~g~~~l~s~s~-dg~v~iwd~~~~~~~~~~~~~~ 277 (475)
.++.|.+||..+.+......+-.+. ...-..+.+ +|+|++++++... ++.|.++|+.+++.+.++..+.
T Consensus 103 ~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~--spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 103 ARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL--TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred ccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEE--cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC
Confidence 3678999999887765333221100 112345777 9999985555433 6899999999999988886433
Q ss_pred cE-----------EeccCCceEEEEEEeeccc-ceEEEEee--------ee-eeEEEC-CCCcEEEEEeCCCcEEEEECC
Q 011924 278 PV-----------NVSSSYCIILLCRLLNFMT-EKVIICLL--------CL-QHSSQS-PDGKLLIIVGDNPDGLLVDSM 335 (475)
Q Consensus 278 ~v-----------~~s~~~~~l~~~~v~d~~~-~~~~~~~~--------~i-~~~~~s-p~g~~l~~~~~dg~i~iwd~~ 335 (475)
.. .++++|..+ +.+... ++...... .+ ...+|. ++|++++ .+.+|.+++.|+.
T Consensus 181 ~~~~~P~g~~~~~~~~~DG~~~----~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~ 255 (386)
T 3sjl_D 181 CYHIFPTAPDTFFMHCRDGSLA----KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLS 255 (386)
T ss_dssp EEEEEEEETTEEEEEETTSCEE----EEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECT
T ss_pred cceeecCCCceeEEECCCCCEE----EEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECC
Confidence 22 233443322 223332 22211111 11 124553 6776555 5568999999987
Q ss_pred CCce--EEEee---------c-CCCCeEEEEEecCCCEEEEEeC----------CCeEEEEECCCCCceEEEEecCCCce
Q 011924 336 TGKT--IASLC---------G-HLDFSFASAWHPNGVTFATGNQ----------DKTCRIWDLRNLSESVAVLKGNLGAI 393 (475)
Q Consensus 336 ~~~~--~~~l~---------~-h~~~v~~~~~sp~g~~l~t~s~----------dg~v~iwd~~~~~~~~~~~~~~~~~v 393 (475)
++.. +..+. + ..+....++++|+++.++.... ..+|-+.|+.+ .+.+..+... ..+
T Consensus 256 ~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~vg-~~~ 333 (386)
T 3sjl_D 256 SGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEMG-HEI 333 (386)
T ss_dssp TSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEE-EEE
T ss_pred CCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEECC-CCc
Confidence 6542 22221 0 1223345778999988888753 25799999987 7777777653 367
Q ss_pred EEEEEccCCC-EEEEE-cCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCC
Q 011924 394 RSIRYTSDGR-YMATA-EPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 443 (475)
Q Consensus 394 ~~l~~spdg~-~la~~-~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspd 443 (475)
.+++++|||+ +|+++ ..++.|.++|..+++.+..+. ..+....|.+++|
T Consensus 334 ~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~-~~~~p~~l~~s~d 384 (386)
T 3sjl_D 334 DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN-QLGHGPQVITTAD 384 (386)
T ss_dssp CEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC-CCCSSCCEEEECC
T ss_pred ceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec-CCCCCceeEECCc
Confidence 8999999997 66664 458999999999998877765 3466677888877
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.37 E-value=5.4e-10 Score=107.97 Aligned_cols=246 Identities=14% Similarity=0.064 Sum_probs=166.0
Q ss_pred cCcEEEEEec-----CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEe---------CCCeEEEEE
Q 011924 198 KDKLLVAGGF-----QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN---------NDCGVRDFD 263 (475)
Q Consensus 198 ~~~~lvsg~~-----dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s---------~dg~v~iwd 263 (475)
+++.+++... ++.|.+.|..+.+....... +. .+ .+.+ +|+|+.++++.+ .++.|.+||
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v--G~-~P--~va~--spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG--GF-LP--NPVV--ADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE--CS-SC--EEEE--CTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC--CC-CC--cEEE--CCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 6666666644 68999999987665532222 22 23 3777 999998555542 467899999
Q ss_pred CCCCeeeeeee-----------ccccEEeccCCceEE--------EEEEeecccceEEEEeeeeeeEEECC-CCcEEEEE
Q 011924 264 MGKYQLSKHFR-----------FPWPVNVSSSYCIIL--------LCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIV 323 (475)
Q Consensus 264 ~~~~~~~~~~~-----------~~~~v~~s~~~~~l~--------~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~ 323 (475)
..+.+.+..+. .+..+.|+++++.+. .+.++|..+++.+..+..-.|..+.| ..+.+++.
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~ 195 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMH 195 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEE
Confidence 99999888764 356688999999774 57899999999887765322333334 45667777
Q ss_pred eCCCcEEEEECCC-CceEEEeecC----CCCeE-EEEEe-cCCCEEEEEeCCCeEEEEECCCCC-ceEEEEe--------
Q 011924 324 GDNPDGLLVDSMT-GKTIASLCGH----LDFSF-ASAWH-PNGVTFATGNQDKTCRIWDLRNLS-ESVAVLK-------- 387 (475)
Q Consensus 324 ~~dg~i~iwd~~~-~~~~~~l~~h----~~~v~-~~~~s-p~g~~l~t~s~dg~v~iwd~~~~~-~~~~~~~-------- 387 (475)
+.||.+.+.++.+ ++.......+ ..+++ ...|. ++|++++ .+.+|+|.+.|+.... ..+..+.
T Consensus 196 ~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 196 CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccccc
Confidence 8899999999875 6654322212 12232 24665 5776555 5568999999996422 1222221
Q ss_pred -c-CCCceEEEEEccCCCEEEEEcC----------CCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCC-eEEEEEe
Q 011924 388 -G-NLGAIRSIRYTSDGRYMATAEP----------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE-SLFIGVW 452 (475)
Q Consensus 388 -~-~~~~v~~l~~spdg~~la~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~-~l~~~~~ 452 (475)
+ ..+....++++|+++.|+.+.. .+.|.++|+++++.+..+.. ..++.+|+|+||++ +|+++.+
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEET
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcC
Confidence 0 1123345788999988877642 35799999999988877653 34788999999997 6776644
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.36 E-value=3.3e-10 Score=107.21 Aligned_cols=220 Identities=13% Similarity=0.020 Sum_probs=145.0
Q ss_pred EEEE--cCc-EEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeee
Q 011924 194 TLAV--KDK-LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (475)
Q Consensus 194 ~l~~--~~~-~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~ 270 (475)
...| +++ +++++..++.|..|+.. .+ . ..+......++.+++ +++|+. +++...++.|.+|+.. ++..
T Consensus 49 gp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~---~~~~~~~~~~~gl~~--d~dG~l-~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWRED-GT-V---DVLLDATAFTNGNAV--DAQQRL-VHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEETT-SC-E---EEEEESCSCEEEEEE--CTTSCE-EEEETTTTEEEEECTT-SCEE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEeCC-CC-E---EEEeCCCCccceeeE--CCCCCE-EEEECCCCEEEEECCC-CCEE
Confidence 4555 666 67788888999999873 33 2 222234556788888 999973 6655556789999986 5432
Q ss_pred eeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEE----EeC-------------CCcEEEEE
Q 011924 271 KHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLII----VGD-------------NPDGLLVD 333 (475)
Q Consensus 271 ~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~----~~~-------------dg~i~iwd 333 (475)
..........+ ..+..++++|+|++.++ +.. .+.|+.+|
T Consensus 120 ~~~~~~~~~~~------------------------~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 120 LLVGRYAGKRL------------------------NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp EEECEETTEEC------------------------SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred EEEeccCCCcc------------------------CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEc
Confidence 22211111110 01117899999998876 321 25678888
Q ss_pred CCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCC------CeEEEEECCCCCce--EEEE-ecCCCceEEEEEccCCCE
Q 011924 334 SMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD------KTCRIWDLRNLSES--VAVL-KGNLGAIRSIRYTSDGRY 404 (475)
Q Consensus 334 ~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~d------g~v~iwd~~~~~~~--~~~~-~~~~~~v~~l~~spdg~~ 404 (475)
..+++..... .......++|+|+++.|+.+... +.|.+|++.. ... ...+ ....+....++++++|++
T Consensus 176 ~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~-~~l~~~~~~~~~~~~~pdgi~~d~~G~l 252 (305)
T 3dr2_A 176 PDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD-GALHDRRHFASVPDGLPDGFCVDRGGWL 252 (305)
T ss_dssp SSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET-TEEEEEEEEECCSSSCCCSEEECTTSCE
T ss_pred CCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC-CCccCCeEEEECCCCCCCeEEECCCCCE
Confidence 7777654433 34567889999999988877665 6899999864 221 1111 112344567899999994
Q ss_pred EEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEec
Q 011924 405 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 405 la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D 453 (475)
. ++..+ .|.+|+. +++.+..+.... .+.+++|+|+++.|++++.+
T Consensus 253 w-v~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 253 W-SSSGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp E-ECCSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETT
T ss_pred E-EecCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCC
Confidence 4 44444 4999997 566666665444 58999999999999998875
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.34 E-value=2.2e-11 Score=118.17 Aligned_cols=171 Identities=15% Similarity=0.085 Sum_probs=121.8
Q ss_pred eEEEEEE--cCcEEEEEecCceEEEEeCCCCCc-------eEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEE
Q 011924 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGV-------SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~i 261 (475)
++..|++ ..+++++|+.++ +++|++..... .+.......+.+ |.+|+| +++. |+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f----d~~~-L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF----HGDQ-VLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE----ETTE-EEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE----CCCE-EEEE-cCCcEEE
Confidence 4556666 788899998875 55698643220 011111223455 888888 7776 6666 8899999
Q ss_pred EECCCCeeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceE
Q 011924 262 FDMGKYQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI 340 (475)
Q Consensus 262 wd~~~~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~ 340 (475)
||+.+........ +..++. ++.+.+. .+++++.||.+.+||+.++...
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~-----------------------------~i~~~~p--~~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVF-----------------------------QLKNVNN--TLVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp EESSSTTCEEEEEECSSCEE-----------------------------EEEECSS--EEEEEETTSEEEEEETTTCCEE
T ss_pred EEchhhhccCccceeeccee-----------------------------eEEecCC--CEEEEECCCCEEEEEccCCccc
Confidence 9997755433332 455566 6665543 3888899999999999988765
Q ss_pred EEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCce--EEEE------e---cCCCceEEEEEccCCCEEEE
Q 011924 341 ASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES--VAVL------K---GNLGAIRSIRYTSDGRYMAT 407 (475)
Q Consensus 341 ~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~--~~~~------~---~~~~~v~~l~~spdg~~la~ 407 (475)
. +...|.|++|||+| ++.|..||++++|+... ... ..++ . +|...|.++.|.+++.+|++
T Consensus 160 ~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 160 Q----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp E----EEESEEEEEECSSE--EEEEETTSCEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred c----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 3 34579999999999 78899999999998865 443 5556 2 35678999999999998886
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.34 E-value=6.6e-10 Score=109.24 Aligned_cols=276 Identities=10% Similarity=0.003 Sum_probs=173.1
Q ss_pred CCCeEEEecC------CeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEe--------
Q 011924 141 SKHDVYLMSH------FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG-------- 206 (475)
Q Consensus 141 ~~~~v~~~~~------~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~-------- 206 (475)
+.+.+|.+.. +.|...+..+.+....+.... .+=..++.++++|+++.
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~------------------~Pgia~SpDgk~lyVan~~~~~~~~ 144 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF------------------LPHPVAAEDGSFFAQASTVFERIAR 144 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS------------------SCEEEECTTSSCEEEEEEEEEETTE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC------------------CCceEECCCCCEEEEEecccccccc
Confidence 3455666533 578889988887766554421 12123444888777765
Q ss_pred --cCceEEEEeCCCCCceEEEeee-cCC---CCceeEEEEEeCCCCCeEEEEEeC-CCeEEEEECCCCeeeeeeecccc-
Q 011924 207 --FQGELICKHLDRPGVSFCSRTT-YDD---NAITNAVEIYGSPSGAVHFTASNN-DCGVRDFDMGKYQLSKHFRFPWP- 278 (475)
Q Consensus 207 --~dg~i~vw~~~~~~~~~~~~~~-~~~---~~~v~~l~~~~s~~g~~~l~s~s~-dg~v~iwd~~~~~~~~~~~~~~~- 278 (475)
.++.|.++|..+.+......+- ... ...-..+.+ +|+|++++++... +++|.+.|+.+++.+..+..+..
T Consensus 145 G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~--spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~ 222 (426)
T 3c75_H 145 GKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL--TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCY 222 (426)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEE
T ss_pred CCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE--cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCce
Confidence 4678999999887765333321 000 112345667 9999985555433 68999999999999888775332
Q ss_pred ----------EEeccCCceEEEEEEeecccceEEEEe---e------eeeeEEECCCCcEEEEEeCCCcEEEEECCCCce
Q 011924 279 ----------VNVSSSYCIILLCRLLNFMTEKVIICL---L------CLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT 339 (475)
Q Consensus 279 ----------v~~s~~~~~l~~~~v~d~~~~~~~~~~---~------~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~ 339 (475)
+.+++++..+. .+..+++..... . ....+.+++++..++..+..+.+.+.|...+..
T Consensus 223 ~~~p~g~~~~v~~~~dG~~~~----V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~ 298 (426)
T 3c75_H 223 HIFPASPTVFYMNCRDGSLAR----VDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGA 298 (426)
T ss_dssp EEEEEETTEEEEEETTSSEEE----EECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCE
T ss_pred eeccCCCcEEEEEcCCCCEEE----EECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCce
Confidence 22334443221 122222221110 0 011456799988888888889999999865542
Q ss_pred E--EEeec----------CCCCeEEEEEecCCCEEEEEeC----------CCeEEEEECCCCCceEEEEecCCCceEEEE
Q 011924 340 I--ASLCG----------HLDFSFASAWHPNGVTFATGNQ----------DKTCRIWDLRNLSESVAVLKGNLGAIRSIR 397 (475)
Q Consensus 340 ~--~~l~~----------h~~~v~~~~~sp~g~~l~t~s~----------dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~ 397 (475)
. ..+.- .......++++|+++.+++... .++|.+.|+.+ .+.+..+.... ....++
T Consensus 299 ~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T-~kvv~~I~vg~-~P~gia 376 (426)
T 3c75_H 299 TFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET-GERINKIELGH-EIDSIN 376 (426)
T ss_dssp EECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEEE-EECEEE
T ss_pred EEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC-CeEEEEEECCC-CcCeEE
Confidence 2 11110 0112223789999888777653 35799999987 77777776433 477999
Q ss_pred EccCCC-EEEEEc-CCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCC
Q 011924 398 YTSDGR-YMATAE-PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 443 (475)
Q Consensus 398 ~spdg~-~la~~~-~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspd 443 (475)
|+|||+ +|+++. .++.|.|+|+.+++.+.++..-. .-..+..+||
T Consensus 377 ~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG-~~P~~i~~~~ 423 (426)
T 3c75_H 377 VSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLG-RGPQIITTHD 423 (426)
T ss_dssp ECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCS-SSCCEEECCC
T ss_pred EccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCC-CCCcEEEcCC
Confidence 999999 888887 58999999999999888763222 2222555654
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.34 E-value=4.2e-09 Score=99.17 Aligned_cols=221 Identities=14% Similarity=0.113 Sum_probs=143.2
Q ss_pred eeEEecCCCeEEEe--cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCce
Q 011924 135 NLVWATSKHDVYLM--SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGE 210 (475)
Q Consensus 135 ~l~~~~~~~~v~~~--~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg~ 210 (475)
..+|......||++ ....|..|+..++... .+.. ...+.++++ +++++++ . ++.
T Consensus 17 gp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-------------------~~~~~~i~~~~dG~l~v~-~-~~~ 74 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTM-------------------DAPVSSVALRQSGGYVAT-I-GTK 74 (297)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEEC-------------------SSCEEEEEEBTTSSEEEE-E-TTE
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeC-------------------CCceEEEEECCCCCEEEE-E-CCe
Confidence 45677777777775 3578999998776542 2221 124677888 6775544 4 567
Q ss_pred EEEEeCCCCCceEEEeeecC-CCCceeEEEEEeCCCCCeEEEEE-eC--------CCeEEEEECCC-CeeeeeeeccccE
Q 011924 211 LICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSPSGAVHFTAS-NN--------DCGVRDFDMGK-YQLSKHFRFPWPV 279 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~-~~~~v~~l~~~~s~~g~~~l~s~-s~--------dg~v~iwd~~~-~~~~~~~~~~~~v 279 (475)
|.+|+..+............ ....++.+.+ +|+|+. +++. .. ...-.+|.+.. ++...........
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~--d~dG~l-~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~p 151 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNRFNDGKV--DPAGRY-FAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDIS 151 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEEEEEEEE--CTTSCE-EEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBE
T ss_pred EEEEECCCCcEEEEEecCCCCCCCCCCCEEE--CCCCCE-EEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccc
Confidence 99999875543321111111 1234677888 999985 4443 22 12334554432 3333222222334
Q ss_pred EeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEE-eCCCcEEEEEC--CCCceE-----EEeecCCCCeE
Q 011924 280 NVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIV-GDNPDGLLVDS--MTGKTI-----ASLCGHLDFSF 351 (475)
Q Consensus 280 ~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~dg~i~iwd~--~~~~~~-----~~l~~h~~~v~ 351 (475)
+ .++|+|+++.|+++ +..+.|.+|++ .+|... ..+..+...+.
T Consensus 152 n-----------------------------gi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~ 202 (297)
T 3g4e_A 152 N-----------------------------GLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPD 202 (297)
T ss_dssp E-----------------------------EEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEE
T ss_pred c-----------------------------ceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCC
Confidence 4 88999999877554 55788999987 456432 22333445688
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEc-cCCCEEEEEcC
Q 011924 352 ASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYT-SDGRYMATAEP 410 (475)
Q Consensus 352 ~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s-pdg~~la~~~~ 410 (475)
.+++.++|++.++....+.|.+||..+ ++.+..+..+...+++++|. |+++.|++++.
T Consensus 203 g~~~d~~G~lwva~~~~~~v~~~d~~t-G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 203 GMCIDAEGKLWVACYNGGRVIRLDPVT-GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEBTTSCEEEEEETTTEEEEECTTT-CCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred eeEECCCCCEEEEEcCCCEEEEEcCCC-ceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 999999999888888888999999975 77888888776789999998 89887766554
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.33 E-value=4.5e-10 Score=110.42 Aligned_cols=247 Identities=13% Similarity=0.031 Sum_probs=164.6
Q ss_pred cCcEEEEEec-C----ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEe---------CCCeEEEEE
Q 011924 198 KDKLLVAGGF-Q----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN---------NDCGVRDFD 263 (475)
Q Consensus 198 ~~~~lvsg~~-d----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s---------~dg~v~iwd 263 (475)
+++.+++... . +.|.++|..+.+......+ +. .+ .+.+ +|+|+.++++.. .++.|.++|
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v--G~-~P--gia~--SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG--GF-LP--HPVA--AEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE--CS-SC--EEEE--CTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC--CC-CC--ceEE--CCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 5555554433 2 7999999988776533332 22 23 6777 999998666543 467899999
Q ss_pred CCCCeeeeeeec-----------cccEEeccCCceEE--------EEEEeecccceEEEEeeeeeeEEECCCC-cEEEEE
Q 011924 264 MGKYQLSKHFRF-----------PWPVNVSSSYCIIL--------LCRLLNFMTEKVIICLLCLQHSSQSPDG-KLLIIV 323 (475)
Q Consensus 264 ~~~~~~~~~~~~-----------~~~v~~s~~~~~l~--------~~~v~d~~~~~~~~~~~~i~~~~~sp~g-~~l~~~ 323 (475)
..+++.+..+.. +..+.|+++++.+. .+.+.|..+++.+..+..-.+....|+| +.+++.
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMN 235 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEE
Confidence 999998877652 45677999998774 4678888888877665432233444533 555666
Q ss_pred eCCCcEEEEECCCCceEEEe----ecCCCCe-EEEEEecCCCEEEEEeCCCeEEEEECCCCCce-EEEEec---------
Q 011924 324 GDNPDGLLVDSMTGKTIASL----CGHLDFS-FASAWHPNGVTFATGNQDKTCRIWDLRNLSES-VAVLKG--------- 388 (475)
Q Consensus 324 ~~dg~i~iwd~~~~~~~~~l----~~h~~~v-~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~-~~~~~~--------- 388 (475)
+.+|.+.+.++.+++..... .....++ ..+.+.|++..++..+..++|.+.|+...... +..+..
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g 315 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD 315 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc
Confidence 77888888888666554322 1111222 23567888888888788899999998642111 111110
Q ss_pred -CCCceEEEEEccCCCEEEEEcC----------CCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCC-eEEEEEe
Q 011924 389 -NLGAIRSIRYTSDGRYMATAEP----------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE-SLFIGVW 452 (475)
Q Consensus 389 -~~~~v~~l~~spdg~~la~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~-~l~~~~~ 452 (475)
.......++++|+|+.|+++.. .+.|.++|+.+.+.+..+.. .....+++|+|||+ +|+++.+
T Consensus 316 ~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~ 390 (426)
T 3c75_H 316 WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSA 390 (426)
T ss_dssp EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEET
T ss_pred cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcC
Confidence 0112224789999987777642 35799999999988877753 34688999999999 8888875
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=5.1e-10 Score=107.82 Aligned_cols=229 Identities=13% Similarity=0.005 Sum_probs=148.3
Q ss_pred eEEEEEE--cCcEEEEEe--cCceEEEEeCCCCCceEEE----eeecCCCCceeEEEEEeCCCCCeEEEEEeC-----CC
Q 011924 191 QVSTLAV--KDKLLVAGG--FQGELICKHLDRPGVSFCS----RTTYDDNAITNAVEIYGSPSGAVHFTASNN-----DC 257 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg~--~dg~i~vw~~~~~~~~~~~----~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~-----dg 257 (475)
....+++ +|+++++.. .+|.++||.+. .+..... .....+-..+..+++ +++|+. +++... +.
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~--d~~g~L-~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKS--DGNGIV-WMLDNGNQSKSVP 93 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEE--CSSSEE-EEEECHHHHTSCC
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEE--cCCCcE-EEEcCCCCcCCCC
Confidence 4567777 677888753 23435566665 2222100 001123456788888 998863 555433 57
Q ss_pred eEEEEECCCCeeeeeeeccc-------cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEE-EEEe---CC
Q 011924 258 GVRDFDMGKYQLSKHFRFPW-------PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLL-IIVG---DN 326 (475)
Q Consensus 258 ~v~iwd~~~~~~~~~~~~~~-------~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l-~~~~---~d 326 (475)
.|.+||+.+++.+..+..+. .++ .++++|++..+ ++-. .+
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~-----------------------------~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVN-----------------------------DLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCC-----------------------------EEEEETTTTEEEEEECCSGGG
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccc-----------------------------eEEEecCCCEEEEEcCccCCC
Confidence 89999999998877766432 223 88999865444 4444 57
Q ss_pred CcEEEEECCCCceEEEeecCC-----------------------------CCeEEEEEecCCCEEEEEeCCC-eEEEEEC
Q 011924 327 PDGLLVDSMTGKTIASLCGHL-----------------------------DFSFASAWHPNGVTFATGNQDK-TCRIWDL 376 (475)
Q Consensus 327 g~i~iwd~~~~~~~~~l~~h~-----------------------------~~v~~~~~sp~g~~l~t~s~dg-~v~iwd~ 376 (475)
+.|.+||+.+++....+.+|. ..+..++|+|+|+.|+.+...+ .+..++.
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 889999999888776665431 2357899999999998887766 4444443
Q ss_pred CC--CCc--------eEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEec-cCCCeEEEEEcCCCC
Q 011924 377 RN--LSE--------SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID-FFGEISGISFSPDTE 445 (475)
Q Consensus 377 ~~--~~~--------~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~-~~~~i~~l~fspdg~ 445 (475)
.. ... .+. ..++.+....++++++|+++++...++.|.+||.++++....... ....+.+++|+++|.
T Consensus 225 ~~~~~~~~~~~~~~~~~~-~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 225 ADLSNLQLTDAELGSKIE-RYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY 303 (343)
T ss_dssp HHHTCTTCCHHHHHTTCE-EEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC
T ss_pred HHhcCCCCChhhhhcceE-ecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCc
Confidence 10 000 011 112334556899999999999998899999999856754333322 245689999999988
Q ss_pred eEEEEEec
Q 011924 446 SLFIGVWD 453 (475)
Q Consensus 446 ~l~~~~~D 453 (475)
.+++....
T Consensus 304 l~v~~~~~ 311 (343)
T 2qe8_A 304 LYFDCNQL 311 (343)
T ss_dssp EEEEECCG
T ss_pred EEEEeCcc
Confidence 76666544
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.27 E-value=2.3e-08 Score=95.46 Aligned_cols=220 Identities=15% Similarity=0.105 Sum_probs=139.8
Q ss_pred ceeEEecCCCeEEEec--CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 134 RNLVWATSKHDVYLMS--HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 134 r~l~~~~~~~~v~~~~--~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
....|.+....+|++. .+.|..|+..+++... +.. ...+.++++ +++++++ +.+
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~-------------------~~~v~~i~~~~dg~l~v~-~~~- 109 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKTV-HAL-------------------PFMGSALAKISDSKQLIA-SDD- 109 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EEC-------------------SSCEEEEEEEETTEEEEE-ETT-
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EEC-------------------CCcceEEEEeCCCeEEEE-ECC-
Confidence 3456777666777753 5788899877654322 211 124677777 6666654 444
Q ss_pred eEEEEeCCCCCceEEEeeecC-CCCceeEEEEEeCCCCCeEEEEEeC------CCeEEEEECCCCeeeeeeeccccEEec
Q 011924 210 ELICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSPSGAVHFTASNN------DCGVRDFDMGKYQLSKHFRFPWPVNVS 282 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~-~~~~v~~l~~~~s~~g~~~l~s~s~------dg~v~iwd~~~~~~~~~~~~~~~v~~s 282 (475)
.|.+|+............... ....++.+.+ +|+|+. +++... .+.|..++ +++...........+
T Consensus 110 gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~--d~~G~l-~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~-- 182 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELESDLPGNRSNDGRM--HPSGAL-WIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPN-- 182 (326)
T ss_dssp EEEEEETTTCCEEEEECSSTTCTTEEEEEEEE--CTTSCE-EEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEE--
T ss_pred CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEE--CCCCCE-EEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccC--
Confidence 488999876553321111111 1235778888 999985 444432 24555555 454433222223344
Q ss_pred cCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEE-eCCCcEEEEECC--CC-ce-----EEEeecCCCCeEEE
Q 011924 283 SSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIV-GDNPDGLLVDSM--TG-KT-----IASLCGHLDFSFAS 353 (475)
Q Consensus 283 ~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~dg~i~iwd~~--~~-~~-----~~~l~~h~~~v~~~ 353 (475)
.++|+|+|+.++++ +.++.|.+|++. +| +. ...+......+..+
T Consensus 183 ---------------------------~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi 235 (326)
T 2ghs_A 183 ---------------------------SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGS 235 (326)
T ss_dssp ---------------------------EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEE
T ss_pred ---------------------------CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCee
Confidence 88999999877655 456889999986 56 31 22333344567889
Q ss_pred EEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEc-cCCCEEEEEcCC
Q 011924 354 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYT-SDGRYMATAEPA 411 (475)
Q Consensus 354 ~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s-pdg~~la~~~~d 411 (475)
++.++|++.++...++.|.+||. . ++.+..+..+...+++++|+ |+++.|++++..
T Consensus 236 ~~d~~G~lwva~~~~~~v~~~d~-~-g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 236 VCDAEGHIWNARWGEGAVDRYDT-D-GNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EECTTSCEEEEEETTTEEEEECT-T-CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EECCCCCEEEEEeCCCEEEEECC-C-CCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 99999998877777789999998 4 56677777666679999998 898877655443
No 218
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.24 E-value=5.1e-09 Score=101.93 Aligned_cols=223 Identities=10% Similarity=0.057 Sum_probs=145.6
Q ss_pred cCcEEE-EEecCceEEEEeCCCC-CceEEEeeec------C-CCCceeEEEEEeCCCCCeEEEEEeCC------CeEEEE
Q 011924 198 KDKLLV-AGGFQGELICKHLDRP-GVSFCSRTTY------D-DNAITNAVEIYGSPSGAVHFTASNND------CGVRDF 262 (475)
Q Consensus 198 ~~~~lv-sg~~dg~i~vw~~~~~-~~~~~~~~~~------~-~~~~v~~l~~~~s~~g~~~l~s~s~d------g~v~iw 262 (475)
++++|+ .|..++.|.++|+.+. ......++.. . ..+.-..+.. +|+| +++++..+ +.|.++
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~--~pdG--i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHC--GPDA--IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEE--CSSC--EEEEEEEETTSCSCCEEEEE
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeE--CCCe--EEEEcCCCcCCCCCCeEEEE
Confidence 455554 5667899999998633 2121122221 0 1112233444 8999 46665444 789999
Q ss_pred ECCCCeeeeeeecc-ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe-----------------
Q 011924 263 DMGKYQLSKHFRFP-WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG----------------- 324 (475)
Q Consensus 263 d~~~~~~~~~~~~~-~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~----------------- 324 (475)
|..+++.+.+.... .+..|. +.+-|+|+++.+++..
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~--------------------------Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~ 223 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLA--------------------------YDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLK 223 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCC--------------------------CCEEEETTTTEEEECBCCCHHHHTTCCCTTTHH
T ss_pred ECCCCeEEEEEccCCCCcccc--------------------------ceEEECCCCCEEEEccCcCccccccccchhhhh
Confidence 99999998888632 221110 0367899999888874
Q ss_pred --CCCcEEEEECCCCceEEEeecC-C-CCeEEEEE--ecCCCEEEEEe------CCCeEEEEECCCCCc--eEEEE--ec
Q 011924 325 --DNPDGLLVDSMTGKTIASLCGH-L-DFSFASAW--HPNGVTFATGN------QDKTCRIWDLRNLSE--SVAVL--KG 388 (475)
Q Consensus 325 --~dg~i~iwd~~~~~~~~~l~~h-~-~~v~~~~~--sp~g~~l~t~s------~dg~v~iwd~~~~~~--~~~~~--~~ 388 (475)
....|.+||+.+++.+.++..- . .....+.| +|+++++++++ .+++|.+|.... +. ....+ ..
T Consensus 224 ~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~ 302 (462)
T 2ece_A 224 DRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPA 302 (462)
T ss_dssp HHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECC
T ss_pred hccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCC
Confidence 3678999999999888888742 1 23455656 99999988887 456887776643 32 11111 11
Q ss_pred C----------------CCceEEEEEccCCCEEEEEcC-CCeEEEEECCC---CeeEEEEecc--------------CCC
Q 011924 389 N----------------LGAIRSIRYTSDGRYMATAEP-ADFVHVYDVKS---GYEKEQEIDF--------------FGE 434 (475)
Q Consensus 389 ~----------------~~~v~~l~~spdg~~la~~~~-dg~i~iwd~~~---~~~~~~~~~~--------------~~~ 434 (475)
. ......+.+||||++|.++.. .+.|.+||+.. .+.+.++... .+.
T Consensus 303 ~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 303 EPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp EECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred ccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCC
Confidence 0 134678999999999988765 57999999853 3444443321 024
Q ss_pred eEEEEEcCCCCeEEEEE
Q 011924 435 ISGISFSPDTESLFIGV 451 (475)
Q Consensus 435 i~~l~fspdg~~l~~~~ 451 (475)
...+.+||||++|+++.
T Consensus 383 Pr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSSEEEEEC
T ss_pred CCEEEEcCCCCEEEEEc
Confidence 68999999999999997
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.21 E-value=2.5e-09 Score=113.05 Aligned_cols=193 Identities=9% Similarity=-0.022 Sum_probs=130.4
Q ss_pred CCceeEEEEEeCCCCCeEEEEEeCC----CeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeee
Q 011924 232 NAITNAVEIYGSPSGAVHFTASNND----CGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLC 307 (475)
Q Consensus 232 ~~~v~~l~~~~s~~g~~~l~s~s~d----g~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~ 307 (475)
...+..++| ||+|+.++++.+.. ..|++||+.+++.+..........
T Consensus 128 ~~~l~~~~~--SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~--------------------------- 178 (693)
T 3iuj_A 128 TTALDQLSF--SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFS--------------------------- 178 (693)
T ss_dssp CCEEEEEEE--CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESC---------------------------
T ss_pred cEEEEEEEE--CCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceec---------------------------
Confidence 335667777 99999866554433 479999999988654311111112
Q ss_pred eeeEEECCCCcEEEEEeCCC-------------cEEEEECCCCce--EEEe--ec-CCCCeEEEEEecCCCEEEEEeC--
Q 011924 308 LQHSSQSPDGKLLIIVGDNP-------------DGLLVDSMTGKT--IASL--CG-HLDFSFASAWHPNGVTFATGNQ-- 367 (475)
Q Consensus 308 i~~~~~sp~g~~l~~~~~dg-------------~i~iwd~~~~~~--~~~l--~~-h~~~v~~~~~sp~g~~l~t~s~-- 367 (475)
.++|+ ||+.|+.++.+. .|++|++.++.. ...+ .. |......+.|+|||++|+....
T Consensus 179 --~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 179 --GISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp --CCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred --cEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 67899 999999887764 399999887653 2233 33 4556788999999998865443
Q ss_pred --CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcC----CCeEEEEECCCCee--EEEEeccCCCeEEEE
Q 011924 368 --DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEP----ADFVHVYDVKSGYE--KEQEIDFFGEISGIS 439 (475)
Q Consensus 368 --dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~----dg~i~iwd~~~~~~--~~~~~~~~~~i~~l~ 439 (475)
...|.++|+.........+..+....... ++++|..|+..+. .+.|.++|+.++.. ...+..+...+. .
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~ 332 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--T 332 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--E
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--E
Confidence 24899999976443566666666666555 6777765554443 36799999987653 245566665555 8
Q ss_pred EcCCCCeEEEEEecCCcceE
Q 011924 440 FSPDTESLFIGVWDRTYGSL 459 (475)
Q Consensus 440 fspdg~~l~~~~~D~~~~~l 459 (475)
|+|++++|+....+.....+
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp EEEETTEEEEEEEETTEEEE
T ss_pred EEEECCEEEEEEEECCeeEE
Confidence 99999999887766544333
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.19 E-value=1.4e-11 Score=120.10 Aligned_cols=204 Identities=13% Similarity=0.101 Sum_probs=112.3
Q ss_pred EcCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc
Q 011924 197 VKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP 276 (475)
Q Consensus 197 ~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 276 (475)
++++.+++|+.+|.|++||..+.+....... +.+.+..+ ..++.. +++++.|+.|+.||..+++.+..+...
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~--~~~g~~-~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPT--HVEEPA-FLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-------CC-EEECTTTCCEEEC-----CCSEECSCC
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecce--EcCCCE-EEEeCCCCEEEEEECCCCceeeeeecc
Confidence 3788999999999999999988776654333 22333333 455654 777789999999999888876555422
Q ss_pred --ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEE
Q 011924 277 --WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASA 354 (475)
Q Consensus 277 --~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~ 354 (475)
..+.. +..+. .+..+++++.++.++.||..+|+.+..+..+. ...
T Consensus 79 ~~~~~~~----------------------------sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~ 125 (369)
T 2hz6_A 79 IPELVQA----------------------------SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADS 125 (369)
T ss_dssp HHHHHTT----------------------------CSCC------CCCCEEEEEEEEECCC-------------------
T ss_pred Ccccccc----------------------------CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----ccc
Confidence 11110 11111 34567778888999999999999988777553 245
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCC---CEEEEEcCCCeEEEEECCCCeeEEEEecc
Q 011924 355 WHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG---RYMATAEPADFVHVYDVKSGYEKEQEIDF 431 (475)
Q Consensus 355 ~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg---~~la~~~~dg~i~iwd~~~~~~~~~~~~~ 431 (475)
++|++..+++++.++.|+.||.++ ++.+-.+... .....++++++ ..+++++.+|.|+.||.++|+.+.... .
T Consensus 126 ~~p~~~~v~~~~~dg~v~a~d~~t-G~~~W~~~~~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~ 201 (369)
T 2hz6_A 126 LSPSTSLLYLGRTEYTITMYDTKT-RELRWNATYF--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-Y 201 (369)
T ss_dssp -------EEEEEEEEEEECCCSSS-SSCCCEEEEE--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-C
T ss_pred ccccCCEEEEEecCCEEEEEECCC-CCEEEeEecc--cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-C
Confidence 667888999999999999999987 5543333221 11233344432 456778889999999999998776655 3
Q ss_pred CCCeE-EEEEcCCCC
Q 011924 432 FGEIS-GISFSPDTE 445 (475)
Q Consensus 432 ~~~i~-~l~fspdg~ 445 (475)
.+++. ...++++|.
T Consensus 202 ~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 202 ASPVVAFYVWQREGL 216 (369)
T ss_dssp SSCEEEEEECTTSSC
T ss_pred CCceEEEEEecCCce
Confidence 44443 345566664
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.18 E-value=4.3e-09 Score=111.26 Aligned_cols=222 Identities=16% Similarity=0.129 Sum_probs=143.7
Q ss_pred eEEEEEE--cCcEEEEE-----ecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCC------
Q 011924 191 QVSTLAV--KDKLLVAG-----GFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC------ 257 (475)
Q Consensus 191 ~v~~l~~--~~~~lvsg-----~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg------ 257 (475)
.+..++| +|++|+.+ +....|++||+.+...... .... .....++| + +|+. |+.++.+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~--~k~~~~~W--s-Dg~~-l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLKD--VKFSGISW--L-GNEG-FFYSSYDKPDGSEL 201 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEEE--EESCCCEE--E-TTTE-EEEEESSCCC----
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccCC--ceeccEEE--e-CCCE-EEEEEecCcccccc
Confidence 5666667 88888843 3346799999987664321 1111 11245678 8 9987 55554553
Q ss_pred -------eEEEEECCCCee--eeeeecc----ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe
Q 011924 258 -------GVRDFDMGKYQL--SKHFRFP----WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG 324 (475)
Q Consensus 258 -------~v~iwd~~~~~~--~~~~~~~----~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 324 (475)
.|++|++.+.+. ...+... .... ++.|||+|++|+...
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~-----------------------------~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYV-----------------------------GATVTEDDRFLLISA 252 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEE-----------------------------EEEECTTSCEEEEEE
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEE-----------------------------EEEEcCCCCEEEEEE
Confidence 489999876542 2222222 2244 788999999887654
Q ss_pred C----CCcEEEEECCCCc-eEEEeecCCCCeEEEEEecCCCEEE-EEeCC---CeEEEEECCCCCc-eEEEEecCCCceE
Q 011924 325 D----NPDGLLVDSMTGK-TIASLCGHLDFSFASAWHPNGVTFA-TGNQD---KTCRIWDLRNLSE-SVAVLKGNLGAIR 394 (475)
Q Consensus 325 ~----dg~i~iwd~~~~~-~~~~l~~h~~~v~~~~~sp~g~~l~-t~s~d---g~v~iwd~~~~~~-~~~~~~~~~~~v~ 394 (475)
. ...|+++|+.++. ....+..+....... |+|+|..|+ +.+.+ +.|.++|+.+... ....+..+...+.
T Consensus 253 ~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 331 (693)
T 3iuj_A 253 ANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL 331 (693)
T ss_dssp ESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE
T ss_pred ccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE
Confidence 2 3589999998764 455666676666665 666665555 44443 5799999976322 1345555655554
Q ss_pred EEEEccCCCEEEEEcCCC---eEEEEECCCCeeEEEE-eccCCCeEEEEEcCCCCeEEEEEec
Q 011924 395 SIRYTSDGRYMATAEPAD---FVHVYDVKSGYEKEQE-IDFFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 395 ~l~~spdg~~la~~~~dg---~i~iwd~~~~~~~~~~-~~~~~~i~~l~fspdg~~l~~~~~D 453 (475)
.|+|++++|+....++ .|++|++..+.. ..+ ....+.+..+.++|++..|+....+
T Consensus 332 --~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~l~~~~ss 391 (693)
T 3iuj_A 332 --TVHSGSGYLFAEYMVDATARVEQFDYEGKRV-REVALPGLGSVSGFNGKHDDPALYFGFEN 391 (693)
T ss_dssp --EEEEETTEEEEEEEETTEEEEEEECTTSCEE-EEECCSSSSEEEECCCCTTCSCEEEEEEC
T ss_pred --EEEEECCEEEEEEEECCeeEEEEEECCCCee-EEeecCCCceEEeeecCCCCCEEEEEecC
Confidence 8999999888776544 799999875543 333 2345678888899999888876544
No 222
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.15 E-value=2.7e-08 Score=91.07 Aligned_cols=184 Identities=11% Similarity=0.077 Sum_probs=130.2
Q ss_pred ceeEEEEEeCCCCCeEEEEEeC--CCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeE
Q 011924 234 ITNAVEIYGSPSGAVHFTASNN--DCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHS 311 (475)
Q Consensus 234 ~v~~l~~~~s~~g~~~l~s~s~--dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~ 311 (475)
....+.+ ++++ .++++.+. ++.|+++|+.+++.+..+..+.... . ..+
T Consensus 22 f~~Gl~~--~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~f-g--------------------------eGi 71 (266)
T 2iwa_A 22 FTQGLVY--AEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYF-G--------------------------EGL 71 (266)
T ss_dssp CEEEEEE--CSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCC-E--------------------------EEE
T ss_pred CcccEEE--eCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcc-e--------------------------EEE
Confidence 3578888 8886 44555543 6899999999999988876332211 0 033
Q ss_pred EECCCCcEEEEE-eCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCC
Q 011924 312 SQSPDGKLLIIV-GDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390 (475)
Q Consensus 312 ~~sp~g~~l~~~-~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~ 390 (475)
++. ++.|.++ -.++.+.++|..+++.+.++...... ...++|+|+.++++..+++|.++|..+ .+.+..+.-..
T Consensus 72 ~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t-~~v~~~I~Vg~ 146 (266)
T 2iwa_A 72 TLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHT-FKLIKKHNVKY 146 (266)
T ss_dssp EEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTT-CCEEEEEECEE
T ss_pred EEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCC-CcEEEEEEECC
Confidence 443 4455444 46789999999999999988632122 234566888888887889999999977 56666665321
Q ss_pred -----CceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccC-------------CCeEEEEEcCCCCeEEEEEe
Q 011924 391 -----GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF-------------GEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 391 -----~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~i~~l~fspdg~~l~~~~~ 452 (475)
..++.+.|. +|+..+.....+.|.+.|+++++.+..+.-.. ....+|+|+|+++.|++++.
T Consensus 147 ~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 147 NGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred CCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 135678888 77665666567899999999999887775321 35689999999999998874
Q ss_pred c
Q 011924 453 D 453 (475)
Q Consensus 453 D 453 (475)
.
T Consensus 226 ~ 226 (266)
T 2iwa_A 226 L 226 (266)
T ss_dssp T
T ss_pred C
Confidence 3
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.15 E-value=1.6e-08 Score=95.43 Aligned_cols=225 Identities=9% Similarity=0.050 Sum_probs=139.7
Q ss_pred ceeEEecCCCeEEEe--cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEecCc
Q 011924 134 RNLVWATSKHDVYLM--SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (475)
Q Consensus 134 r~l~~~~~~~~v~~~--~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~~dg 209 (475)
...+|....+.|+++ .++.|..|+. +++...+... ...+..+++ +|+++++....+
T Consensus 48 egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~-------------------~~~~~gl~~d~dG~l~v~~~~~~ 107 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDA-------------------TAFTNGNAVDAQQRLVHCEHGRR 107 (305)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEES-------------------CSCEEEEEECTTSCEEEEETTTT
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCC-------------------CCccceeeECCCCCEEEEECCCC
Confidence 456788777767665 4578889986 4443222111 123567777 677666655567
Q ss_pred eEEEEeCCCCCceEEEeeecC-CCCceeEEEEEeCCCCCeEEEE----EeC-------------CCeEEEEECCCCeeee
Q 011924 210 ELICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSPSGAVHFTA----SNN-------------DCGVRDFDMGKYQLSK 271 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~-~~~~v~~l~~~~s~~g~~~l~s----~s~-------------dg~v~iwd~~~~~~~~ 271 (475)
.|.+|+.+ ............ ....++.+.+ .|+|+. +++ |.. .+.|..|+..+++...
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~--d~dG~l-~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~ 183 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIV--ARDGAI-WFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR 183 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEE--CTTSCE-EEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEE--CCCCCE-EEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE
Confidence 89999875 332211111111 1123567888 999974 554 221 2457777776665443
Q ss_pred eeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC------CcEEEEECCCCceE--EEe
Q 011924 272 HFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN------PDGLLVDSMTGKTI--ASL 343 (475)
Q Consensus 272 ~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d------g~i~iwd~~~~~~~--~~l 343 (475)
.. .....+ .++|+|+++.|+++... +.|.+|++..+... ..+
T Consensus 184 ~~-~~~~p~-----------------------------gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~ 233 (305)
T 3dr2_A 184 MA-DLDHPN-----------------------------GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHF 233 (305)
T ss_dssp EE-EESSEE-----------------------------EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEE
T ss_pred Ee-cCCCCc-----------------------------ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEE
Confidence 32 223344 88999999988777654 68999998755411 111
Q ss_pred -ecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEE
Q 011924 344 -CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYD 418 (475)
Q Consensus 344 -~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd 418 (475)
.........++++++|++.++ +.+ .|.+|+.. ++.+..+..+. .+.+++|+|+++.|.+++.++ +..++
T Consensus 234 ~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~--g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 234 ASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD--GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp ECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECTT--SCEEEEEECSS-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EECCCCCCCeEEECCCCCEEEe-cCC-cEEEECCC--CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 112344567899999995444 444 49999983 56677776555 588999999999888887764 44444
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=5.2e-08 Score=96.08 Aligned_cols=229 Identities=10% Similarity=0.072 Sum_probs=146.6
Q ss_pred eEEecCCCeEEEecC--CeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCc--eE
Q 011924 136 LVWATSKHDVYLMSH--FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQG--EL 211 (475)
Q Consensus 136 l~~~~~~~~v~~~~~--~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg--~i 211 (475)
+.+. ....||++.. ..|..|+..++....+.... .... .++..+++.|+++..++ .|
T Consensus 136 la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-----------------~~~~-ia~~~~g~~l~~~d~~~~~~I 196 (409)
T 3hrp_A 136 IAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-----------------KGGK-PAVTKDKQRVYSIGWEGTHTV 196 (409)
T ss_dssp EEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEETC-----------------CBCB-CEECTTSSEEEEEBSSTTCEE
T ss_pred EEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeeccC-----------------CCCc-eeEecCCCcEEEEecCCCceE
Confidence 3344 3445777643 78889988766655443211 1112 23334788888887766 78
Q ss_pred EEEeCCCCCceEEE-eeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee--cc-----ccEEecc
Q 011924 212 ICKHLDRPGVSFCS-RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FP-----WPVNVSS 283 (475)
Q Consensus 212 ~vw~~~~~~~~~~~-~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~-----~~v~~s~ 283 (475)
.+++.......... ..........+++++ +|++..+++ +..++.|+.|+..++....... .. .|.+
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~iav--~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~--- 270 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKIGAVAL--DETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP--- 270 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCCCBCEE--CTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCC---
T ss_pred EEEEcCCCceeEEeeeccchhcCCcEEEEE--eCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccc---
Confidence 88887654432111 111213455678888 995444344 5678899999998765322100 11 0122
Q ss_pred CCceEEEEEEeecccceEEEEeeeeeeEEECCC-CcEEEEEeCCCcEEEEECCCCceEEEeecCC---------------
Q 011924 284 SYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCGHL--------------- 347 (475)
Q Consensus 284 ~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~--------------- 347 (475)
.++|+|+ +.++++-..++.|+.|+.. ++ +..+.++.
T Consensus 271 --------------------------~ia~~p~~g~lyv~d~~~~~I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~ 322 (409)
T 3hrp_A 271 --------------------------YLIYYFVDSNFYMSDQNLSSVYKITPD-GE-CEWFCGSATQKTVQDGLREEALF 322 (409)
T ss_dssp --------------------------EEEEETTTTEEEEEETTTTEEEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBC
T ss_pred --------------------------cEEEeCCCCEEEEEeCCCCEEEEEecC-CC-EEEEEeCCCCCCcCCCcccccEe
Confidence 7899995 6666666678889999875 33 33444432
Q ss_pred CCeEEEEEecCCCEEEEEe-CCCeEEEEECCCCCceEEEEecC---------------CCceEEEEEccCCCEEEEEcCC
Q 011924 348 DFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSESVAVLKGN---------------LGAIRSIRYTSDGRYMATAEPA 411 (475)
Q Consensus 348 ~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~~~~~~~~~~~---------------~~~v~~l~~spdg~~la~~~~d 411 (475)
.....++++|+|+++++-+ .+++|+.|++.. +. +..+.++ -.....++++|+|.++++-..+
T Consensus 323 ~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~-G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n 400 (409)
T 3hrp_A 323 AQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD-GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG 400 (409)
T ss_dssp SSEEEEEECTTCCEEEEETTTTCEEEEEETTT-TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT
T ss_pred CCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC-CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC
Confidence 4578999999999777777 789999999754 43 4444443 2357899999999888888888
Q ss_pred CeEEEEEC
Q 011924 412 DFVHVYDV 419 (475)
Q Consensus 412 g~i~iwd~ 419 (475)
+.|+.+++
T Consensus 401 ~~Ir~i~~ 408 (409)
T 3hrp_A 401 KAIRKYAV 408 (409)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 88988775
No 225
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=8.9e-07 Score=81.61 Aligned_cols=216 Identities=13% Similarity=0.026 Sum_probs=136.2
Q ss_pred eEEEEEE--cCc-EEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 191 QVSTLAV--KDK-LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 191 ~v~~l~~--~~~-~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
.+..+++ +++ ++++-...+.|.++++...... ............+++ ++++..++++....+.|.++++...
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~---~~~~~~~~~p~~ia~--d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT---TIIRQDLGSPEGIAL--DHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE---EEECTTCCCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE---EEEECCCCCccEEEE--EecCCeEEEEECCCCEEEEEEcCCC
Confidence 4567777 344 4555556789999998754432 222222234678888 8876666777777889999998643
Q ss_pred eeeeeeec-cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC---CCcEEEEECCCCceEEEe
Q 011924 268 QLSKHFRF-PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD---NPDGLLVDSMTGKTIASL 343 (475)
Q Consensus 268 ~~~~~~~~-~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~---dg~i~iwd~~~~~~~~~l 343 (475)
........ ..... .++++|++..|.++.. .+.|..+++. +.....+
T Consensus 112 ~~~~~~~~~~~~P~-----------------------------~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~ 161 (267)
T 1npe_A 112 QRRVLFDTGLVNPR-----------------------------GIVTDPVRGNLYWTDWNRDNPKIETSHMD-GTNRRIL 161 (267)
T ss_dssp SCEEEECSSCSSEE-----------------------------EEEEETTTTEEEEEECCSSSCEEEEEETT-SCCCEEE
T ss_pred CEEEEEECCCCCcc-----------------------------EEEEeeCCCEEEEEECCCCCcEEEEEecC-CCCcEEE
Confidence 22111111 12334 8899996555555543 4678888875 3333333
Q ss_pred e-cCCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEE-cCCCeEEEEECC
Q 011924 344 C-GHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVK 420 (475)
Q Consensus 344 ~-~h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~~ 420 (475)
. ........++++|++..|+.+. ..+.|.++|... ......+.. ......++.. +..|+.+ ...+.|.++|..
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCC
Confidence 2 3345688999999876665554 567999999864 332333332 2334566654 4455544 456899999999
Q ss_pred CCeeEEEEeccC-CCeEEEEEcCCCC
Q 011924 421 SGYEKEQEIDFF-GEISGISFSPDTE 445 (475)
Q Consensus 421 ~~~~~~~~~~~~-~~i~~l~fspdg~ 445 (475)
+++.+..+.... ....++++.|++.
T Consensus 238 ~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 238 ISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCceEEEccccccccceeeecCccC
Confidence 998877775433 2578899999875
No 226
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.10 E-value=4.9e-08 Score=88.35 Aligned_cols=184 Identities=12% Similarity=0.111 Sum_probs=131.0
Q ss_pred CCCceeEEEEEeCCCCCeEEEEEeCCC--eEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeee
Q 011924 231 DNAITNAVEIYGSPSGAVHFTASNNDC--GVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCL 308 (475)
Q Consensus 231 ~~~~v~~l~~~~s~~g~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i 308 (475)
...-+..|.| + ++ .++.+.+.+| .|+++|+.+++.+..+..+...-
T Consensus 41 ~~~ftqGL~~--~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~F---------------------------- 88 (262)
T 3nol_A 41 TKAFTEGFFY--R-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYF---------------------------- 88 (262)
T ss_dssp TTCEEEEEEE--E-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCC----------------------------
T ss_pred CCcccceEEE--E-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecCCccc----------------------------
Confidence 3344678888 6 45 5677777766 89999999999998887544332
Q ss_pred eeEEECCCCcEEEEE-eCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEe
Q 011924 309 QHSSQSPDGKLLIIV-GDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK 387 (475)
Q Consensus 309 ~~~~~sp~g~~l~~~-~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~ 387 (475)
...+.++++.|..+ -.++.+.+||..+.+.+.++... ..-..++ +++..|+.+..++.|.++|..+ .+.+..+.
T Consensus 89 -geGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~-~eG~glt--~dg~~L~~SdGs~~i~~iDp~T-~~v~~~I~ 163 (262)
T 3nol_A 89 -GEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD-GEGWGLT--HNDQYLIMSDGTPVLRFLDPES-LTPVRTIT 163 (262)
T ss_dssp -EEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECS-SCCCCEE--ECSSCEEECCSSSEEEEECTTT-CSEEEEEE
T ss_pred -eeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECC-CCceEEe--cCCCEEEEECCCCeEEEEcCCC-CeEEEEEE
Confidence 22233344455544 46889999999999999998842 2223344 5777777777678899999976 56666655
Q ss_pred cCC-----CceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEecc------------CCCeEEEEEcCCCCeEEEE
Q 011924 388 GNL-----GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF------------FGEISGISFSPDTESLFIG 450 (475)
Q Consensus 388 ~~~-----~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~------------~~~i~~l~fspdg~~l~~~ 450 (475)
... ..++.+.|. +|+..+....++.|.+.|.++|+.+..+... ....++|+|+|+++.|+++
T Consensus 164 V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred eccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 421 234557776 7876666667889999999999988777531 1356899999999999988
Q ss_pred Ee
Q 011924 451 VW 452 (475)
Q Consensus 451 ~~ 452 (475)
+.
T Consensus 243 GK 244 (262)
T 3nol_A 243 GK 244 (262)
T ss_dssp ET
T ss_pred CC
Confidence 74
No 227
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.08 E-value=9.7e-09 Score=103.45 Aligned_cols=250 Identities=9% Similarity=0.010 Sum_probs=144.8
Q ss_pred EEEEE-----cCcEEEEEe-cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeC-CCCCeEEEEE------------
Q 011924 193 STLAV-----KDKLLVAGG-FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGS-PSGAVHFTAS------------ 253 (475)
Q Consensus 193 ~~l~~-----~~~~lvsg~-~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s-~~g~~~l~s~------------ 253 (475)
..+++ +|++|+... .++.|.+.|+...+......+ . .......+++. + |+++++++++
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~i-p-~g~~phg~~~~-~~p~~~~v~~~~~~~~p~~~dg~~ 166 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEI-P-NAKGIHGLRPQ-KWPRSNYVFCNGEDETPLVNDGTN 166 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEEC-S-SCCSEEEEEEC-CSSBCSEEEEEECSCEESSCSSSS
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeC-C-CCCCCcceeee-ecCCCcEEEEecccccccCCCCcc
Confidence 45555 777777655 456799999988665432222 1 12234566652 4 8999855553
Q ss_pred -----eCCCeEEEEECCCCeeeeeeec---cccEEeccCCceEEEEEEee-------cccc---eEEEEeeeeeeEEECC
Q 011924 254 -----NNDCGVRDFDMGKYQLSKHFRF---PWPVNVSSSYCIILLCRLLN-------FMTE---KVIICLLCLQHSSQSP 315 (475)
Q Consensus 254 -----s~dg~v~iwd~~~~~~~~~~~~---~~~v~~s~~~~~l~~~~v~d-------~~~~---~~~~~~~~i~~~~~sp 315 (475)
..++.+.+.|..+.+....+.- +..+.++++++.+....--. ..+. ..+.....-....+.+
T Consensus 167 l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 167 MEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp TTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred cccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 2345789999999888877763 23333444443332111000 0000 0000000000001122
Q ss_pred CCcEEEEEeCCCcEEEEECCC--Cce-EEEeecCCCCeEEEEEecCCCEEEEEeC-CCeEEEEECCCCC-----------
Q 011924 316 DGKLLIIVGDNPDGLLVDSMT--GKT-IASLCGHLDFSFASAWHPNGVTFATGNQ-DKTCRIWDLRNLS----------- 380 (475)
Q Consensus 316 ~g~~l~~~~~dg~i~iwd~~~--~~~-~~~l~~h~~~v~~~~~sp~g~~l~t~s~-dg~v~iwd~~~~~----------- 380 (475)
+|+.... +.|.+.|.++ ++. +..+.. .....++.++|||+++++++. +.+|.++|+.+..
T Consensus 247 ~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~ 321 (595)
T 1fwx_A 247 AGDYQEL----NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRS 321 (595)
T ss_dssp HTCSEEE----TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGG
T ss_pred CCCeeEE----CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCccc
Confidence 2332222 3588899887 555 555543 234567999999998887764 7899999997521
Q ss_pred ceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCC----------CeeEEEEeccCCCe-----EEEEEcCCCC
Q 011924 381 ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS----------GYEKEQEIDFFGEI-----SGISFSPDTE 445 (475)
Q Consensus 381 ~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~----------~~~~~~~~~~~~~i-----~~l~fspdg~ 445 (475)
..+..+.. ....+.++|+|+|...++...++.|.+||+.+ ...+..+..|..+- .++.++|||+
T Consensus 322 ~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk 400 (595)
T 1fwx_A 322 AVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND 400 (595)
T ss_dssp GEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS
T ss_pred ceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC
Confidence 12333333 34577999999994445667799999999976 33444444443221 2335689999
Q ss_pred eEEEEE
Q 011924 446 SLFIGV 451 (475)
Q Consensus 446 ~l~~~~ 451 (475)
+|+++.
T Consensus 401 ~l~~~N 406 (595)
T 1fwx_A 401 WLVCLS 406 (595)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 999874
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.07 E-value=3.3e-08 Score=95.44 Aligned_cols=231 Identities=12% Similarity=-0.056 Sum_probs=142.3
Q ss_pred EEEEEecCc----eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEe---------CCCeEEEEECCCC
Q 011924 201 LLVAGGFQG----ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN---------NDCGVRDFDMGKY 267 (475)
Q Consensus 201 ~lvsg~~dg----~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s---------~dg~v~iwd~~~~ 267 (475)
.+++-..++ .|.+.|..+.+... .+..+.. + .+.+ +|+|+.++++.+ .++.|.+||+.++
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~--~i~vG~~-P--~i~~--spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLG--HSLGAFL-S--LAVA--GHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEE--EEEECTT-C--EEEE--CTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred EEEECCccCCccceEEEEECCCCeEEE--EEeCCCC-C--ceEE--CCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 444444444 88899988776653 2222332 3 6777 999998555542 4789999999999
Q ss_pred eeeeeee-----------ccccEEeccCCceEE--------EEEE--eecccceEEEEeeee--------eeEEECCCCc
Q 011924 268 QLSKHFR-----------FPWPVNVSSSYCIIL--------LCRL--LNFMTEKVIICLLCL--------QHSSQSPDGK 318 (475)
Q Consensus 268 ~~~~~~~-----------~~~~v~~s~~~~~l~--------~~~v--~d~~~~~~~~~~~~i--------~~~~~sp~g~ 318 (475)
+.+.++. .+..+.|+|+++.+. .+.+ +|..+-..+....++ .-++++++|+
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~ 186 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPAS 186 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTS
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCC
Confidence 9988875 256788999998775 3556 888761111110000 0122223332
Q ss_pred EE-------------------------------------EEEeCCCcEEEEECCCCc--eEEEeec-------C---CCC
Q 011924 319 LL-------------------------------------IIVGDNPDGLLVDSMTGK--TIASLCG-------H---LDF 349 (475)
Q Consensus 319 ~l-------------------------------------~~~~~dg~i~iwd~~~~~--~~~~l~~-------h---~~~ 349 (475)
++ +..+. +.+.+.|+.++. .+..+.- + ...
T Consensus 187 ~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 187 LAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp CEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred EEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 22 22222 445555554322 1111110 0 011
Q ss_pred eEEEEEecCCCEEEEEeC-C--------CeEEEEECCCCCceEEEEecCCCceEEEEEccCCC-EEEEEc-CCCeEEEEE
Q 011924 350 SFASAWHPNGVTFATGNQ-D--------KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR-YMATAE-PADFVHVYD 418 (475)
Q Consensus 350 v~~~~~sp~g~~l~t~s~-d--------g~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~-~la~~~-~dg~i~iwd 418 (475)
...++++|+++.++.+.. . ..+.++|+.+ .+.+..+.... ....++|+|||+ .+++.. .++.|.++|
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 122789999988887643 2 3566999987 67777776543 578999999998 455555 589999999
Q ss_pred CCCCeeEEEEeccCCCeEEEEEcC
Q 011924 419 VKSGYEKEQEIDFFGEISGISFSP 442 (475)
Q Consensus 419 ~~~~~~~~~~~~~~~~i~~l~fsp 442 (475)
+.+++.+.++.. .+...++++.+
T Consensus 344 ~~t~kvv~~I~v-g~~P~~i~~~~ 366 (368)
T 1mda_H 344 AASDQDQSSVEL-DKGPESLSVQN 366 (368)
T ss_dssp SSSCEEEEECCC-CSCCCEEECCC
T ss_pred CCCCcEEEEEEC-CCCCCEEEeec
Confidence 999988877653 34455666654
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=3.1e-08 Score=96.47 Aligned_cols=180 Identities=12% Similarity=0.112 Sum_probs=128.3
Q ss_pred CCCCeEEEEEeCCCeEEEEECCCC----eeeeeee---c----c-ccEEeccCCceEEEEEEeecccceEEEEeeeeeeE
Q 011924 244 PSGAVHFTASNNDCGVRDFDMGKY----QLSKHFR---F----P-WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHS 311 (475)
Q Consensus 244 ~~g~~~l~s~s~dg~v~iwd~~~~----~~~~~~~---~----~-~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~ 311 (475)
++++++++.+-.++.|.++|+.+. +.++.+. . . .... .+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph-----------------------------~~ 143 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLH-----------------------------TV 143 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEE-----------------------------EE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCccc-----------------------------ce
Confidence 788888888989999999999754 5555552 0 0 1122 67
Q ss_pred EECCCCcEEEEEeCC------CcEEEEECCCCceEEEeecCC---CCeEEEEEecCCCEEEEEe----------------
Q 011924 312 SQSPDGKLLIIVGDN------PDGLLVDSMTGKTIASLCGHL---DFSFASAWHPNGVTFATGN---------------- 366 (475)
Q Consensus 312 ~~sp~g~~l~~~~~d------g~i~iwd~~~~~~~~~l~~h~---~~v~~~~~sp~g~~l~t~s---------------- 366 (475)
..+|+| +++++..+ +.+.++|..+++.+.++.... ...+.+.|+|+++.++++.
T Consensus 144 ~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 144 HCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp EECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTH
T ss_pred eECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhh
Confidence 788999 66665444 789999999999999887322 2345688999999999885
Q ss_pred ---CCCeEEEEECCCCCceEEEEecC-C-CceEEEEE--ccCCCEEEEEc------CCCeEEEEECCCCeeE--EEE--e
Q 011924 367 ---QDKTCRIWDLRNLSESVAVLKGN-L-GAIRSIRY--TSDGRYMATAE------PADFVHVYDVKSGYEK--EQE--I 429 (475)
Q Consensus 367 ---~dg~v~iwd~~~~~~~~~~~~~~-~-~~v~~l~~--spdg~~la~~~------~dg~i~iwd~~~~~~~--~~~--~ 429 (475)
...+|.+||+.. .+.+.++... . .....++| +|+|+++++++ .++.|.+|....+... ..+ .
T Consensus 223 ~~~~~d~V~v~D~~~-~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~ 301 (462)
T 2ece_A 223 KDRYGNRIHFWDLRK-RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIP 301 (462)
T ss_dssp HHHSCCEEEEEETTT-TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred hhccCCEEEEEECCC-CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCC
Confidence 367999999976 6777777653 1 24456666 99999888776 4568877665444311 111 1
Q ss_pred cc----------------CCCeEEEEEcCCCCeEEEEEecC
Q 011924 430 DF----------------FGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 430 ~~----------------~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
.. ...+..|.+||||++|+++.+..
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~ 342 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI 342 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC
Confidence 10 24578999999999999997754
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.05 E-value=1.7e-06 Score=84.00 Aligned_cols=290 Identities=9% Similarity=0.008 Sum_probs=174.2
Q ss_pred CCeEEEec-CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCceEEEEeCCCCC
Q 011924 142 KHDVYLMS-HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPG 220 (475)
Q Consensus 142 ~~~v~~~~-~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~ 220 (475)
...||+.. ++.+..++..+++..-.......... ...........+...+..+++++.+|.|..+|..+.+
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~ 124 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGW--------FSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGT 124 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---C--------CSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCcccccc--------ccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCC
Confidence 45566654 46888899888875433333211000 0000111223445577888889999999999998777
Q ss_pred ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEE--------eccCCceEE---
Q 011924 221 VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVN--------VSSSYCIIL--- 289 (475)
Q Consensus 221 ~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~--------~s~~~~~l~--- 289 (475)
......... .......+ . ++ . ++.++.++.|..+|..+++.+..+....++. ....+..+.
T Consensus 125 ~~W~~~~~~---~~~~~p~~--~-~~-~-v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ 196 (376)
T 3q7m_A 125 VAWQTKVAG---EALSRPVV--S-DG-L-VLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGD 196 (376)
T ss_dssp EEEEEECSS---CCCSCCEE--E-TT-E-EEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCT
T ss_pred EEEEEeCCC---ceEcCCEE--E-CC-E-EEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcC
Confidence 654333211 11112222 1 33 3 6777789999999999998877766432221 001222221
Q ss_pred --EEEEeecccceEEEEeeee-----------eeEEECC--CCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEE
Q 011924 290 --LCRLLNFMTEKVIICLLCL-----------QHSSQSP--DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASA 354 (475)
Q Consensus 290 --~~~v~d~~~~~~~~~~~~i-----------~~~~~sp--~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~ 354 (475)
.+..+|..+++.......- ..+...| .+..+++++.++.+..+|..+|+.+..... .....+.
T Consensus 197 ~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~ 274 (376)
T 3q7m_A 197 NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFI 274 (376)
T ss_dssp TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEE
T ss_pred CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCce
Confidence 4677788777766443210 0011222 356677788899999999999998876652 2334443
Q ss_pred EecCCCEEEEEeCCCeEEEEECCCCCceEEEEec-CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCC
Q 011924 355 WHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 433 (475)
Q Consensus 355 ~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~-~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~ 433 (475)
. ++..++.++.++.|..+|..+ ++.+-.... ....+..+.. .+..|++++.+|.|+++|.++|+.+.......+
T Consensus 275 ~--~~~~l~~~~~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~ 349 (376)
T 3q7m_A 275 V--DGNRIYLVDQNDRVMALTIDG-GVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSS 349 (376)
T ss_dssp E--ETTEEEEEETTCCEEEEETTT-CCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTT
T ss_pred E--ECCEEEEEcCCCeEEEEECCC-CcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCC
Confidence 3 466788888899999999977 565544442 1222233333 245788888999999999999988776654333
Q ss_pred CeE-EEEEcCCCCeEEEEEecCCc
Q 011924 434 EIS-GISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 434 ~i~-~l~fspdg~~l~~~~~D~~~ 456 (475)
.+. .+.. .+..|++++.|+.+
T Consensus 350 ~~~~~~~~--~~~~l~v~~~~G~l 371 (376)
T 3q7m_A 350 GFQTEPVA--ADGKLLIQAKDGTV 371 (376)
T ss_dssp CBCSCCEE--ETTEEEEEBTTSCE
T ss_pred cceeCCEE--ECCEEEEEeCCCEE
Confidence 332 2222 24578888887654
No 231
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.05 E-value=2.6e-07 Score=82.90 Aligned_cols=185 Identities=16% Similarity=0.140 Sum_probs=130.4
Q ss_pred CCCCceeEEEEEeCCCCCeEEEEEeCCC--eEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeee
Q 011924 230 DDNAITNAVEIYGSPSGAVHFTASNNDC--GVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLC 307 (475)
Q Consensus 230 ~~~~~v~~l~~~~s~~g~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~ 307 (475)
....-+..+.| ++ ..++.+.+..| .|+.+|+.+++.+.....+....
T Consensus 18 d~~~ftqGL~~--~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f--------------------------- 66 (243)
T 3mbr_X 18 DTTAFTEGLFY--LR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF--------------------------- 66 (243)
T ss_dssp CTTCCEEEEEE--ET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC---------------------------
T ss_pred CCccccccEEE--EC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc---------------------------
Confidence 34455778888 54 45577766654 89999999999998887544332
Q ss_pred eeeEEECCCCcEE-EEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEE
Q 011924 308 LQHSSQSPDGKLL-IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 386 (475)
Q Consensus 308 i~~~~~sp~g~~l-~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~ 386 (475)
...+.+.+..| +..-.++.+.+||..+.+.+.++... ..-..++ +++..|+.+..++.|.++|..+ .+.+..+
T Consensus 67 --geGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t-~~~~~~I 140 (243)
T 3mbr_X 67 --GAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDT-LQQVGSI 140 (243)
T ss_dssp --EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECS-SCCCEEE--ECSSCEEEECSSSEEEEECTTT-CCEEEEE
T ss_pred --eeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC-CCceEEe--eCCCEEEEECCCCeEEEEeCCC-CeEEEEE
Confidence 22222333444 44457889999999999999998843 3334554 5677777777788999999977 5666666
Q ss_pred ecCC-----CceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEecc-------------CCCeEEEEEcCCCCeEE
Q 011924 387 KGNL-----GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-------------FGEISGISFSPDTESLF 448 (475)
Q Consensus 387 ~~~~-----~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~i~~l~fspdg~~l~ 448 (475)
.-.. ..++.+.|. +|+..+..-..+.|.+.|.++|+.+..+.-. ....++|+|+|+++.|+
T Consensus 141 ~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 141 KVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred EEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence 5422 244566665 7776665556789999999999988776621 13568999999999999
Q ss_pred EEEe
Q 011924 449 IGVW 452 (475)
Q Consensus 449 ~~~~ 452 (475)
+++.
T Consensus 220 VTGK 223 (243)
T 3mbr_X 220 VTGK 223 (243)
T ss_dssp EEET
T ss_pred EECC
Confidence 8863
No 232
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.05 E-value=2.7e-08 Score=100.25 Aligned_cols=175 Identities=11% Similarity=-0.037 Sum_probs=126.2
Q ss_pred CCCeEEEEEeCCCeEEEEECCCCeeeeeee--ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEE-C-CCCcEE
Q 011924 245 SGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQ-S-PDGKLL 320 (475)
Q Consensus 245 ~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~-s-p~g~~l 320 (475)
+|++++++...+..|.+.|+.++++...+. ...... .+++ + |+++++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph-----------------------------g~~~~~~p~~~~v 150 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH-----------------------------GLRPQKWPRSNYV 150 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE-----------------------------EEEECCSSBCSEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc-----------------------------ceeeeecCCCcEE
Confidence 788888888788899999999999888554 334455 7776 5 899999
Q ss_pred EEEe------------------CCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCC-------------
Q 011924 321 IIVG------------------DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDK------------- 369 (475)
Q Consensus 321 ~~~~------------------~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg------------- 369 (475)
++++ .++.+.++|..+.+.+.++.--. ....++++|+|+++++.+.+.
T Consensus 151 ~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~ 229 (595)
T 1fwx_A 151 FCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAE 229 (595)
T ss_dssp EEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCS
T ss_pred EEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccc
Confidence 8885 24578899999998888776322 345678999999999888553
Q ss_pred -------------------------eEEEEECCC--CCceEEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEEECCC
Q 011924 370 -------------------------TCRIWDLRN--LSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKS 421 (475)
Q Consensus 370 -------------------------~v~iwd~~~--~~~~~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~~~ 421 (475)
.|.|.|.++ ....+..+.... ...++.++|||+++++++ .+++|.++|+.+
T Consensus 230 ~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~-~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~ 308 (595)
T 1fwx_A 230 MDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR 308 (595)
T ss_dssp EEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEES-SCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred cceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCC-CceEEEEcCCCCEEEEeCCCCCeEEEEECcc
Confidence 367777764 222244554332 456899999999877665 578999999986
Q ss_pred Ce-----------eEEEEeccCCCeEEEEEcCCCCeEEEEE
Q 011924 422 GY-----------EKEQEIDFFGEISGISFSPDTESLFIGV 451 (475)
Q Consensus 422 ~~-----------~~~~~~~~~~~i~~l~fspdg~~l~~~~ 451 (475)
.. .+............++|+|+| ++++..
T Consensus 309 ~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~ 348 (595)
T 1fwx_A 309 FDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSL 348 (595)
T ss_dssp HHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEE
T ss_pred cccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEE
Confidence 53 122222344578999999999 666553
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.04 E-value=2.9e-07 Score=96.91 Aligned_cols=270 Identities=13% Similarity=0.115 Sum_probs=163.5
Q ss_pred CCeEEEec-CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEe------cCceEEEE
Q 011924 142 KHDVYLMS-HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG------FQGELICK 214 (475)
Q Consensus 142 ~~~v~~~~-~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~------~dg~i~vw 214 (475)
...||+.. ++.++-++..+++..-......+... .......++. .++ .+++++ .+|.|+.|
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~--------~~~~~~sP~v---~~g-~v~vg~~~~~~~~~g~v~a~ 188 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKR--------SYTITGAPRV---VNG-KVVIGNGGAEFGVRGYVTAY 188 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTS--------CCBCCSCCEE---ETT-EEEECCBCTTTCCBCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCC--------CccccCCcEE---ECC-EEEEEeCCCccCCCCEEEEE
Confidence 45666654 78899999988876543332100000 0011112221 244 445543 37899999
Q ss_pred eCCCCCceEEEeeecCC----------------------------CCceeEEEEEeCCCCCeEEEEEeCCC---------
Q 011924 215 HLDRPGVSFCSRTTYDD----------------------------NAITNAVEIYGSPSGAVHFTASNNDC--------- 257 (475)
Q Consensus 215 ~~~~~~~~~~~~~~~~~----------------------------~~~v~~l~~~~s~~g~~~l~s~s~dg--------- 257 (475)
|..+.+........... ...-..+.+ .|.+.. ++.++.++
T Consensus 189 D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~--d~~~~~-vy~~~~~g~~w~~~~~~ 265 (689)
T 1yiq_A 189 DAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAY--DPELNL-LYIGVGNGSLWDPKWRS 265 (689)
T ss_dssp ETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEE--ETTTTE-EEEECCCEESSCHHHHH
T ss_pred ECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeE--cCCCCE-EEEeCCCCCccccCCCC
Confidence 99988766544432110 001124555 777765 66666665
Q ss_pred ----------eEEEEECCCCeeeeeeecc-ccEEeccCCceEEEEEEeeccc-ceEEEEeeeeeeEEECCCCc---EEEE
Q 011924 258 ----------GVRDFDMGKYQLSKHFRFP-WPVNVSSSYCIILLCRLLNFMT-EKVIICLLCLQHSSQSPDGK---LLII 322 (475)
Q Consensus 258 ----------~v~iwd~~~~~~~~~~~~~-~~v~~s~~~~~l~~~~v~d~~~-~~~~~~~~~i~~~~~sp~g~---~l~~ 322 (475)
.|..+|..+++.+.++... ... |+... ...+ ......+|+ .++.
T Consensus 266 ~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~--------------wd~~~~~~~~-------l~d~~~~G~~~~~v~~ 324 (689)
T 1yiq_A 266 QAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA--------------WDYTATQHMI-------LAELPIDGKPRKVLMQ 324 (689)
T ss_dssp TTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC--------------SCCCCCSCEE-------EEEEEETTEEEEEEEE
T ss_pred CCCCCceeeeeEEEEEccCCceeEeeecCCccc--------------ccccCCCCcE-------EEeeccCCcEEEEEEE
Confidence 4999999999988877632 110 00000 0000 111122554 7888
Q ss_pred EeCCCcEEEEECCCCceEEEeecCC-CC--------------------------------------eEEEEEecCCCEEE
Q 011924 323 VGDNPDGLLVDSMTGKTIASLCGHL-DF--------------------------------------SFASAWHPNGVTFA 363 (475)
Q Consensus 323 ~~~dg~i~iwd~~~~~~~~~l~~h~-~~--------------------------------------v~~~~~sp~g~~l~ 363 (475)
++.+|.++++|..+|+++....-.. .. -..++++|+..+++
T Consensus 325 ~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~y 404 (689)
T 1yiq_A 325 APKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVY 404 (689)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEE
T ss_pred ECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEE
Confidence 8899999999999999875432111 00 01268899888877
Q ss_pred EEeC---------------------------------------------CCeEEEEECCCCCceEEEEecCCCceEEEEE
Q 011924 364 TGNQ---------------------------------------------DKTCRIWDLRNLSESVAVLKGNLGAIRSIRY 398 (475)
Q Consensus 364 t~s~---------------------------------------------dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~ 398 (475)
+... +|+|+.||+.+ ++.+-.+..+. ++..-.+
T Consensus 405 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~ 482 (689)
T 1yiq_A 405 IPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-QQAAWEVPYVT-IFNGGTL 482 (689)
T ss_dssp EEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT-TEEEEEEEESS-SCCCCEE
T ss_pred EeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC-CCeEeEccCCC-CccCccc
Confidence 7632 37899999977 67665555443 2333456
Q ss_pred ccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCC-eEEEEEcCCCCeEEE
Q 011924 399 TSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGE-ISGISFSPDTESLFI 449 (475)
Q Consensus 399 spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~-i~~l~fspdg~~l~~ 449 (475)
...|.++++++.|+.|+.||.++|+.+.++....+. ..-+.|+.+|+..++
T Consensus 483 ~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 483 STAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred eECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 667889999999999999999999998887654332 245777888875443
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=7e-08 Score=87.32 Aligned_cols=183 Identities=11% Similarity=0.025 Sum_probs=130.9
Q ss_pred CCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeee
Q 011924 231 DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQH 310 (475)
Q Consensus 231 ~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~ 310 (475)
...-+..|.+ + ++.++++.+.+|.|+++|+++++.+..+ .+...- . ..
T Consensus 53 ~~~ftqGL~~--~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~F-g--------------------------eG 100 (268)
T 3nok_A 53 TNAFTQGLVF--H--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIF-A--------------------------EG 100 (268)
T ss_dssp TTCCEEEEEE--E--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCC-E--------------------------EE
T ss_pred CccccceEEE--E--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcc-e--------------------------eE
Confidence 3344578887 4 4567888889999999999999988877 443322 0 03
Q ss_pred EEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCC
Q 011924 311 SSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 390 (475)
Q Consensus 311 ~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~ 390 (475)
+++.. +++.+..-.++.+.+||..+.+.+.++.. ...-+.++ ++++.|+.+..++.|.++|..+ .+.+..+.-..
T Consensus 101 it~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T-~~v~~~I~V~~ 175 (268)
T 3nok_A 101 LASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDG-FALVGAVQVKL 175 (268)
T ss_dssp EEECS-SCEEEEESSSCEEEEEETTTTEEEEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTT-CCEEEEEECEE
T ss_pred EEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCC-CeEEEEEEeCC
Confidence 44432 23444445788999999999999999884 23334444 5778888887789999999977 56666665422
Q ss_pred -----CceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEecc-------------CCCeEEEEEcCCCCeEEEEE
Q 011924 391 -----GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-------------FGEISGISFSPDTESLFIGV 451 (475)
Q Consensus 391 -----~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~i~~l~fspdg~~l~~~~ 451 (475)
..++.+.|. +|+..+.....+.|.+.|.++|+.+..+.-. ....++|+|+|+++.|++++
T Consensus 176 ~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 176 RGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 244567776 7876666656889999999999988776531 13568999999998888876
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.04 E-value=1.6e-07 Score=98.67 Aligned_cols=273 Identities=11% Similarity=0.044 Sum_probs=167.7
Q ss_pred CCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEec------CceEEEE
Q 011924 142 KHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGF------QGELICK 214 (475)
Q Consensus 142 ~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~------dg~i~vw 214 (475)
...||+. .++.++.++..+++..-......... .+ ......++ +.+..+++++. +|.|+.+
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~-----~~---~~~~~~p~----v~~~~v~v~~~~~~~~~~g~v~a~ 195 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQK-----GS---LTITGAPR----VFKGKVIIGNGGAEYGVRGYITAY 195 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCC-----SS---CBCCSCCE----EETTEEEECCBCTTTCCBCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcC-----cC---cccccCcE----EECCEEEEEecccccCCCCEEEEE
Confidence 4567764 47889999998887654433220000 00 01111122 23455565553 7999999
Q ss_pred eCCCCCceEEEeeecCCC-----------------------------CceeEEEEEeCCCCCeEEEEEeCCC--------
Q 011924 215 HLDRPGVSFCSRTTYDDN-----------------------------AITNAVEIYGSPSGAVHFTASNNDC-------- 257 (475)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~-----------------------------~~v~~l~~~~s~~g~~~l~s~s~dg-------- 257 (475)
|..+.+............ .....+++ +|++.. ++.++.++
T Consensus 196 D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~--d~~~~~-vy~~~~~~~~w~~~~~ 272 (677)
T 1kb0_A 196 DAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTF--DAELNT-MYVGTGNGSPWSHKVR 272 (677)
T ss_dssp ETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEE--ETTTTE-EEEECCCEESSCHHHH
T ss_pred ECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeE--cCCCCE-EEEECCCCccccCCCC
Confidence 998887665443322110 01123555 777775 55554443
Q ss_pred -----------eEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCC---cEEEEE
Q 011924 258 -----------GVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDG---KLLIIV 323 (475)
Q Consensus 258 -----------~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g---~~l~~~ 323 (475)
+|..+|..+++.+.++.....-. ||..... ....+....+| +.++++
T Consensus 273 ~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~-------------wd~~~~~------~p~l~~~~~dG~~~~~l~~~ 333 (677)
T 1kb0_A 273 SPKGGDNLYLASIVALDPDTGKYKWHYQETPGDN-------------WDYTSTQ------PMILADIKIAGKPRKVILHA 333 (677)
T ss_dssp STTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC-------------SCCCCCS------CCEEEEEEETTEEEEEEEEC
T ss_pred CccCCCCeeeEEEEEEECCCCCEEEEEecCCCcc-------------cccccCC------CcEEEecccCCcEeeEEEEE
Confidence 59999999999888776321100 0000000 00022233467 678888
Q ss_pred eCCCcEEEEECCCCceEEEeecCC-C----------Ce------------------------EEEEEecCCCEEEEEeCC
Q 011924 324 GDNPDGLLVDSMTGKTIASLCGHL-D----------FS------------------------FASAWHPNGVTFATGNQD 368 (475)
Q Consensus 324 ~~dg~i~iwd~~~~~~~~~l~~h~-~----------~v------------------------~~~~~sp~g~~l~t~s~d 368 (475)
+.+|.++++|..+|+.+..+.... . ++ ..++++|++.++++...+
T Consensus 334 ~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~ 413 (677)
T 1kb0_A 334 PKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQN 413 (677)
T ss_dssp CTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChh
Confidence 999999999999999887665221 0 01 146889988888776432
Q ss_pred -------------------------------------------CeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEE
Q 011924 369 -------------------------------------------KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYM 405 (475)
Q Consensus 369 -------------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~l 405 (475)
+.|..||+.+ ++.+-.+.. ..++....+...|..+
T Consensus 414 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~~~g~~v 491 (677)
T 1kb0_A 414 VPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-QKAAWSVEH-VSPWNGGTLTTAGNVV 491 (677)
T ss_dssp CCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-TEEEEEEEE-SSSCCCCEEEETTTEE
T ss_pred cceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC-CcEEeecCC-CCCCcCcceEeCCCEE
Confidence 7899999976 665555543 2344455567778888
Q ss_pred EEEcCCCeEEEEECCCCeeEEEEeccC-CCeEEEEEcCCCCeEEEE
Q 011924 406 ATAEPADFVHVYDVKSGYEKEQEIDFF-GEISGISFSPDTESLFIG 450 (475)
Q Consensus 406 a~~~~dg~i~iwd~~~~~~~~~~~~~~-~~i~~l~fspdg~~l~~~ 450 (475)
++++.++.+++||.++|+.+..+.... ....-+.|+++|+.+++.
T Consensus 492 ~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 492 FQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 999999999999999999998887443 233456677888755543
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.02 E-value=6.5e-08 Score=91.86 Aligned_cols=211 Identities=12% Similarity=0.036 Sum_probs=144.2
Q ss_pred CcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc-c
Q 011924 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP-W 277 (475)
Q Consensus 199 ~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-~ 277 (475)
+..|.+|+.+|.|..++.. ....... ......+.++.. .++|. +..++.++.|..+|.. ++....+... .
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~---~~~~~~~~~~~~--~~~g~--l~vgt~~~~l~~~d~~-g~~~~~~~~~~~ 177 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRF---KTKKAIYATPIV--SEDGT--IYVGSNDNYLYAINPD-GTEKWRFKTNDA 177 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEE---ECSSCCCSCCEE--CTTSC--EEEECTTSEEEEECTT-SCEEEEEECSSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEE---cCCCceeeeeEE--cCCCE--EEEEcCCCEEEEECCC-CCEeEEEecCCC
Confidence 6778888889999999987 4433221 123334555655 66775 5566678999999998 7766665532 2
Q ss_pred cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEec
Q 011924 278 PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHP 357 (475)
Q Consensus 278 ~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp 357 (475)
.+. ++.+.++|.+.+ ++ +.+..+| .+++.+..+......+.++...+
T Consensus 178 ~~~-----------------------------~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~ 224 (330)
T 3hxj_A 178 ITS-----------------------------AASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISE 224 (330)
T ss_dssp CCS-----------------------------CCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECT
T ss_pred cee-----------------------------eeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECC
Confidence 333 667777887554 44 7899999 78887777766666788888888
Q ss_pred CCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEE
Q 011924 358 NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISG 437 (475)
Q Consensus 358 ~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 437 (475)
+|. |..++.++.|..+|. + +..+..+......+..+.+.++|+ |.+++.++.|..+|. +++.+..+......+.+
T Consensus 225 ~g~-l~v~t~~~gl~~~~~-~-g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~ 299 (330)
T 3hxj_A 225 DGT-IYVTSLDGHLYAINP-D-GTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIAT 299 (330)
T ss_dssp TSC-EEEEETTTEEEEECT-T-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSC
T ss_pred CCe-EEEEcCCCeEEEECC-C-CCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccc
Confidence 875 555667778888875 3 455555554444455566766775 566777888999995 67766666555556778
Q ss_pred EEEcCCCCeEEEEEecCCcc
Q 011924 438 ISFSPDTESLFIGVWDRTYG 457 (475)
Q Consensus 438 l~fspdg~~l~~~~~D~~~~ 457 (475)
+...++|+ |++++.+|.+.
T Consensus 300 ~~~d~~g~-l~~gt~~G~~~ 318 (330)
T 3hxj_A 300 PVIDENGT-IYFGTRNGKFY 318 (330)
T ss_dssp CEECTTCC-EEEECTTSCEE
T ss_pred eEEcCCCE-EEEEcCCCeEE
Confidence 88878875 66777776553
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.00 E-value=2.3e-07 Score=97.70 Aligned_cols=252 Identities=12% Similarity=0.034 Sum_probs=163.5
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCC-------Cc-eeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCee
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDN-------AI-TNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~-------~~-v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~ 269 (475)
.+..|++++.++.|+.+|..+.+............ .. ...+.+ .+.. +++++.|+.|..+|..+++.
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~-v~v~~~dg~l~AlDa~TG~~ 143 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV----WKGK-VYVGVLDGRLEAIDAKTGQR 143 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE----ETTE-EEEECTTSEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE----ECCE-EEEEccCCEEEEEECCCCCE
Confidence 56677888889999999998877665433211100 00 111222 2333 77777899999999999998
Q ss_pred eeeeecc------ccEEecc---CCceE-----------EEEEEeecccceEEEEeeee---------------------
Q 011924 270 SKHFRFP------WPVNVSS---SYCII-----------LLCRLLNFMTEKVIICLLCL--------------------- 308 (475)
Q Consensus 270 ~~~~~~~------~~v~~s~---~~~~l-----------~~~~v~d~~~~~~~~~~~~i--------------------- 308 (475)
+..+... ..+..+| .+.++ +.+..+|..+|+.+.....+
T Consensus 144 ~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 223 (689)
T 1yiq_A 144 AWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWF 223 (689)
T ss_dssp EEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCC
T ss_pred eeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccC
Confidence 8766532 1222222 23222 24778888888877554311
Q ss_pred --------------eeEEECCCCcEEEEEeCCCc-------------------EEEEECCCCceEEEeec--CC------
Q 011924 309 --------------QHSSQSPDGKLLIIVGDNPD-------------------GLLVDSMTGKTIASLCG--HL------ 347 (475)
Q Consensus 309 --------------~~~~~sp~g~~l~~~~~dg~-------------------i~iwd~~~~~~~~~l~~--h~------ 347 (475)
..++++|++.+++++..++. |..+|..+|+.+..++. |.
T Consensus 224 g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~ 303 (689)
T 1yiq_A 224 GDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTA 303 (689)
T ss_dssp SSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCC
T ss_pred CceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccC
Confidence 25788898889998877753 99999999999888764 22
Q ss_pred -CCeEEEEEecCCC---EEEEEeCCCeEEEEECCCCCceEEEEecCC---------------------------------
Q 011924 348 -DFSFASAWHPNGV---TFATGNQDKTCRIWDLRNLSESVAVLKGNL--------------------------------- 390 (475)
Q Consensus 348 -~~v~~~~~sp~g~---~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~--------------------------------- 390 (475)
..+.-.....+|+ .++.++.+|.+.++|.++ ++++.......
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~ 382 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT-GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVT 382 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEES
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC-CCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeC
Confidence 1122223333665 788999999999999977 66553222110
Q ss_pred ----C--ceEEEEEccCCCEEEEEcC---------------------------------------------CCeEEEEEC
Q 011924 391 ----G--AIRSIRYTSDGRYMATAEP---------------------------------------------ADFVHVYDV 419 (475)
Q Consensus 391 ----~--~v~~l~~spdg~~la~~~~---------------------------------------------dg~i~iwd~ 419 (475)
+ .-..++|+|+..+|++... +|.|+.||+
T Consensus 383 p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~ 462 (689)
T 1yiq_A 383 PAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP 462 (689)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred CCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence 0 0113789998887776521 377999999
Q ss_pred CCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCCc
Q 011924 420 KSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 456 (475)
Q Consensus 420 ~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~~ 456 (475)
.+|+.+-+...+. ++.+..++..+..+++|+.|+.+
T Consensus 463 ~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l 498 (689)
T 1yiq_A 463 VKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRV 498 (689)
T ss_dssp TTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEE
T ss_pred CCCCeEeEccCCC-CccCccceECCCEEEEECCCCcE
Confidence 9999887765443 33444666778888888766543
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.00 E-value=1.2e-07 Score=99.58 Aligned_cols=298 Identities=11% Similarity=0.008 Sum_probs=170.0
Q ss_pred CCeEEEec-CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCceEEEEeCCCCC
Q 011924 142 KHDVYLMS-HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPG 220 (475)
Q Consensus 142 ~~~v~~~~-~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~ 220 (475)
...||+.+ ++.|+-++..+++..-..+........ +. .........+++.+..|++++.+|.|..+|..+.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~---~~----~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~ 149 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTG---FK----GCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGK 149 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGG---GG----SSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccc---cc----ccccCCCCCceEECCEEEEEcCCCEEEEEECCCCC
Confidence 34566544 477888888777554333222110000 00 00000012344567888999999999999998877
Q ss_pred ceEEEeeecCC---CCceeEEEEEeCCCCCeEEEEEe-----CCCeEEEEECCCCeeeeeeeccccE----EeccCCceE
Q 011924 221 VSFCSRTTYDD---NAITNAVEIYGSPSGAVHFTASN-----NDCGVRDFDMGKYQLSKHFRFPWPV----NVSSSYCII 288 (475)
Q Consensus 221 ~~~~~~~~~~~---~~~v~~l~~~~s~~g~~~l~s~s-----~dg~v~iwd~~~~~~~~~~~~~~~v----~~s~~~~~l 288 (475)
........... ........+ . ++ .+++.++ .++.|+.||..+++.+..+....+. ...+. .-
T Consensus 150 ~~W~~~~~~~~~~~~~~~~~p~v--~-~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~--~~ 223 (677)
T 1kb0_A 150 EVWHQNTFEGQKGSLTITGAPRV--F-KG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDES--MK 223 (677)
T ss_dssp EEEEEETTTTCCSSCBCCSCCEE--E-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHH--HH
T ss_pred EEeeecCCcCcCcCcccccCcEE--E-CC-EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccc--cc
Confidence 66544332010 011111122 1 33 3333332 2799999999999998777632111 00000 00
Q ss_pred EEEEEeecccceEE---EEeeeeeeEEECCCCcEEEEEeCCC-------------------cEEEEECCCCceEEEeec-
Q 011924 289 LLCRLLNFMTEKVI---ICLLCLQHSSQSPDGKLLIIVGDNP-------------------DGLLVDSMTGKTIASLCG- 345 (475)
Q Consensus 289 ~~~~v~d~~~~~~~---~~~~~i~~~~~sp~g~~l~~~~~dg-------------------~i~iwd~~~~~~~~~l~~- 345 (475)
.....|.. .+... ........++++|++.+++++..++ .|..+|..+|+.+..++.
T Consensus 224 ~g~~~w~~-~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~ 302 (677)
T 1kb0_A 224 RAARTWDP-SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQET 302 (677)
T ss_dssp HHHTTSCG-GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESS
T ss_pred cccccccc-cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecC
Confidence 00000100 00000 0000112568889888888887654 499999999999887764
Q ss_pred -CC-------CCeEEEEEecCC---CEEEEEeCCCeEEEEECCCCCceEEEEecCC----------C-ce----------
Q 011924 346 -HL-------DFSFASAWHPNG---VTFATGNQDKTCRIWDLRNLSESVAVLKGNL----------G-AI---------- 393 (475)
Q Consensus 346 -h~-------~~v~~~~~sp~g---~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~----------~-~v---------- 393 (475)
|. ....-+....+| ..++.++.+|.|.++|.++ ++.+..+.... + ++
T Consensus 303 ~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~ 381 (677)
T 1kb0_A 303 PGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSK 381 (677)
T ss_dssp TTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTS
T ss_pred CCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-CCEeccccccccCcccccCCCCceeeccccCcCCC
Confidence 21 112223344477 6899999999999999987 66665544211 0 01
Q ss_pred --------------EEEEEccCCCEEEEEcC-------------------------------------------CCeEEE
Q 011924 394 --------------RSIRYTSDGRYMATAEP-------------------------------------------ADFVHV 416 (475)
Q Consensus 394 --------------~~l~~spdg~~la~~~~-------------------------------------------dg~i~i 416 (475)
..++|+|++.++++... .+.|..
T Consensus 382 ~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A 461 (677)
T 1kb0_A 382 PQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLA 461 (677)
T ss_dssp CEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEE
T ss_pred ccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEE
Confidence 15788998888777532 278999
Q ss_pred EECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 417 YDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 417 wd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
||+.+++.+-+.. +..++.+..++.++..+++++.|+.
T Consensus 462 ~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~ 499 (677)
T 1kb0_A 462 WDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGR 499 (677)
T ss_dssp EETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSE
T ss_pred EeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCc
Confidence 9999998877665 3444555667777888888866654
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.91 E-value=1.6e-10 Score=112.66 Aligned_cols=172 Identities=11% Similarity=0.050 Sum_probs=93.9
Q ss_pred CCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe
Q 011924 245 SGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG 324 (475)
Q Consensus 245 ~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 324 (475)
++.. +++++.|+.|+.||..+++.+..+.. .++. +..+.+++..+++++
T Consensus 8 ~~~~-v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-----------------------------s~p~~~~g~~~v~~s 56 (369)
T 2hz6_A 8 PETL-LFVSTLDGSLHAVSKRTGSIKWTLKE-DPVL-----------------------------QVPTHVEEPAFLPDP 56 (369)
T ss_dssp CTTE-EEEEETTSEEEEEETTTCCEEEEEEC-CCSC-----------------------------CCC-----CCEEECT
T ss_pred eCCE-EEEEcCCCEEEEEECCCCCEEEEecC-CCce-----------------------------ecceEcCCCEEEEeC
Confidence 3444 78888999999999999999887776 4444 444556777888878
Q ss_pred CCCcEEEEECCCCceEEEeecCCCC-eE-EEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCC
Q 011924 325 DNPDGLLVDSMTGKTIASLCGHLDF-SF-ASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 402 (475)
Q Consensus 325 ~dg~i~iwd~~~~~~~~~l~~h~~~-v~-~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg 402 (475)
.++.|+.||..+|+.+..+..+... +. +..+. .+..+++++.++.|+.||.++ ++.+-.+..+. ...++|++
T Consensus 57 ~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~ 130 (369)
T 2hz6_A 57 NDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPST 130 (369)
T ss_dssp TTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC-------------------------
T ss_pred CCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccC
Confidence 9999999999999887766543211 10 01111 345678888899999999977 66655554432 24567788
Q ss_pred CEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEcCCC---CeEEEEEecCC
Q 011924 403 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDT---ESLFIGVWDRT 455 (475)
Q Consensus 403 ~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg---~~l~~~~~D~~ 455 (475)
..|++++.++.|+.||.++|+.+..+.... ....+++++. ..+++++.|+.
T Consensus 131 ~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~ 184 (369)
T 2hz6_A 131 SLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGL 184 (369)
T ss_dssp --EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCE
T ss_pred CEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCE
Confidence 899999999999999999997655543211 1223333332 45666655543
No 240
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.90 E-value=6.5e-08 Score=93.41 Aligned_cols=101 Identities=7% Similarity=-0.201 Sum_probs=77.4
Q ss_pred CeEEEEEeCCC----eEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEE
Q 011924 247 AVHFTASNNDC----GVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLII 322 (475)
Q Consensus 247 ~~~l~s~s~dg----~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~ 322 (475)
..++++...++ +|.++|..+++.+.++..... - .+.++|+|+++++
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~-P-----------------------------~i~~spDg~~lyV 81 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-S-----------------------------LAVAGHSGSDFAL 81 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT-C-----------------------------EEEECTTSSCEEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCC-C-----------------------------ceEECCCCCEEEE
Confidence 44466655555 888999999999988873221 1 5689999999998
Q ss_pred Ee----------CCCcEEEEECCCCceEEEeecC-------CCCeEEEEEecCCCEEEEEeC--CCeEEE--EECC
Q 011924 323 VG----------DNPDGLLVDSMTGKTIASLCGH-------LDFSFASAWHPNGVTFATGNQ--DKTCRI--WDLR 377 (475)
Q Consensus 323 ~~----------~dg~i~iwd~~~~~~~~~l~~h-------~~~v~~~~~sp~g~~l~t~s~--dg~v~i--wd~~ 377 (475)
+. .++.|.+||+.+++.+.++... ......++++|||+++++++. ...|.+ +|+.
T Consensus 82 an~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 82 ASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred EcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 86 3678999999999999998643 124567899999999999875 457888 8873
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=9.4e-07 Score=80.82 Aligned_cols=192 Identities=13% Similarity=0.054 Sum_probs=132.7
Q ss_pred EEEEEE--cCcEEEEEec--CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 192 VSTLAV--KDKLLVAGGF--QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~--dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
...|++ ++.++++.+. ++.|.+.|+.+.+......+ ........+++ .++.++++.-.++.+.++|..++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi~~----~g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM--DDSYFGEGLTL----LNEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--CTTCCEEEEEE----ETTEEEEEETTCSEEEEEETTTT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec--CCCcceEEEEE----eCCEEEEEEecCCEEEEEECCCC
Confidence 356677 3444444443 57999999998776532222 22212234544 35566677767899999999999
Q ss_pred eeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCC
Q 011924 268 QLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL 347 (475)
Q Consensus 268 ~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~ 347 (475)
+.+..+... .-. ...++++|+.++++..++.|.++|..+.+.+..+.-..
T Consensus 97 ~v~~~i~~g-~~~-----------------------------g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~ 146 (266)
T 2iwa_A 97 SNIKNFTHQ-MKD-----------------------------GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKY 146 (266)
T ss_dssp EEEEEEECC-SSS-----------------------------CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred cEEEEEECC-CCC-----------------------------eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECC
Confidence 999888744 111 33466788878777778899999999999888776321
Q ss_pred -----CCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecC-------------CCceEEEEEccCCC-EEEEE
Q 011924 348 -----DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN-------------LGAIRSIRYTSDGR-YMATA 408 (475)
Q Consensus 348 -----~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~-------------~~~v~~l~~spdg~-~la~~ 408 (475)
..++.+.|. +|...+....++.|.+.|..+ ++.+..+... ......++|+|+++ +++++
T Consensus 147 ~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 147 NGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred CCcccccceeEEEE-CCEEEEecCCCCeEEEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 246788888 775555554678999999987 7777777642 12457999999986 55556
Q ss_pred cCCCeEEEEECCC
Q 011924 409 EPADFVHVYDVKS 421 (475)
Q Consensus 409 ~~dg~i~iwd~~~ 421 (475)
...+.|.+.++..
T Consensus 225 k~~~~v~~i~l~~ 237 (266)
T 2iwa_A 225 KLWPKLFEIKLHL 237 (266)
T ss_dssp TTCSEEEEEEEEE
T ss_pred CCCCeEEEEEEec
Confidence 6778888888754
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.85 E-value=1.7e-07 Score=90.08 Aligned_cols=222 Identities=8% Similarity=-0.001 Sum_probs=131.9
Q ss_pred eeEEEEEE--cCcEEEEEec-----CceEEEEeCCCCCceEEEeee---cCCCCceeEEEEEeCCCCCeEEEEEe---CC
Q 011924 190 TQVSTLAV--KDKLLVAGGF-----QGELICKHLDRPGVSFCSRTT---YDDNAITNAVEIYGSPSGAVHFTASN---ND 256 (475)
Q Consensus 190 ~~v~~l~~--~~~~lvsg~~-----dg~i~vw~~~~~~~~~~~~~~---~~~~~~v~~l~~~~s~~g~~~l~s~s---~d 256 (475)
..+..+++ +++++++-.. .+.|.+||+.+.+........ ..+....+.+++ ++++..++++.+ .+
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~v--d~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAV--DLIHNFVYISDPAPDDK 144 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEE--ETTTTEEEEEECCSGGG
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEE--ecCCCEEEEEcCccCCC
Confidence 36788888 4566565433 578999998865533222211 112234688888 876555567765 68
Q ss_pred CeEEEEECCCCeeeeeeec-----cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCC-cEE
Q 011924 257 CGVRDFDMGKYQLSKHFRF-----PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNP-DGL 330 (475)
Q Consensus 257 g~v~iwd~~~~~~~~~~~~-----~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg-~i~ 330 (475)
+.|.+||+.+++..+.+.. +.+..+..++..+. ..+. .+........+..++|+|+|+.|+++...+ .++
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~---~~~~-~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~ 220 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQ---IGQP-DGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMY 220 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECB---EECT-TSCEECCCCCEEEEEECTTSCEEEEEESSCSEEE
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEE---eccC-CCceeceecccceeEeccCCCEEEEEeCCCCeEE
Confidence 8999999988877665431 11122233332111 0000 011100011234899999999888876655 555
Q ss_pred EEECC---CCc-----eEE--EeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEec-CCCceEEEEEc
Q 011924 331 LVDSM---TGK-----TIA--SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG-NLGAIRSIRYT 399 (475)
Q Consensus 331 iwd~~---~~~-----~~~--~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~-~~~~v~~l~~s 399 (475)
.++.. .+. ... ...++......++++++|+++++...++.|.+||... ++....... ....+.+++|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~-G~~~~~~~~~~~~~p~~va~~ 299 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSAD-RAYKLLVTDEKLSWTDSFNFG 299 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTT-TEEEEEEECGGGSCEEEEEEC
T ss_pred EEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCC-CCEEEEEECCceecCCeeEEC
Confidence 55432 111 000 1123444566799999999999988899999999843 443333322 24568899999
Q ss_pred cCCCEEEEEcCCCeEEEEE
Q 011924 400 SDGRYMATAEPADFVHVYD 418 (475)
Q Consensus 400 pdg~~la~~~~dg~i~iwd 418 (475)
++|+++++.+..+.+.+|.
T Consensus 300 ~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 300 SDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp TTSCEEEEECCGGGSGGGB
T ss_pred CCCcEEEEeCccccccccc
Confidence 9999888877655554443
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.85 E-value=4.8e-06 Score=80.68 Aligned_cols=243 Identities=13% Similarity=0.052 Sum_probs=148.2
Q ss_pred cCcEEEEEecCceEEEEeCCCCCceEEEeeecC-------CCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeee
Q 011924 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-------DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~-------~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~ 270 (475)
.+..+++++.+|.|..+|..+.+.......... .......+.. .+.. +++++.++.|..+|..+++.+
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV----SGGH-VYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE----ETTE-EEEEETTSEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE----eCCE-EEEEcCCCEEEEEECCCCCEE
Confidence 577888888899999999987776543333211 1122233333 2344 667778999999999999887
Q ss_pred eeeeccccEEe---ccCCceEE-----EEEEeecccceEEEEeeee---------eeEEECCCCcEEEEEeCCCcEEEEE
Q 011924 271 KHFRFPWPVNV---SSSYCIIL-----LCRLLNFMTEKVIICLLCL---------QHSSQSPDGKLLIIVGDNPDGLLVD 333 (475)
Q Consensus 271 ~~~~~~~~v~~---s~~~~~l~-----~~~v~d~~~~~~~~~~~~i---------~~~~~sp~g~~l~~~~~dg~i~iwd 333 (475)
..+.....+.. ...+..+. .+..+|..+++.......- ..... .+..+++++.++.+..+|
T Consensus 127 W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 127 WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp EEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEE
T ss_pred EEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEE
Confidence 76664322211 11222222 4778888888776543311 11112 245677788889999999
Q ss_pred CCCCceEEEeecCCCC-------eEEEEEec--CCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCE
Q 011924 334 SMTGKTIASLCGHLDF-------SFASAWHP--NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 404 (475)
Q Consensus 334 ~~~~~~~~~l~~h~~~-------v~~~~~sp--~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~ 404 (475)
..+|+.+......... +..+.-.| .+..++.++.++.+..+|.++ ++.+-.... .....+.. ++..
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t-G~~~w~~~~--~~~~~~~~--~~~~ 279 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS-GQIMWKREL--GSVNDFIV--DGNR 279 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTT-CCEEEEECC--CCEEEEEE--ETTE
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC-CcEEeeccC--CCCCCceE--ECCE
Confidence 9999988776532110 00011122 356778888899999999977 555544332 23444444 3567
Q ss_pred EEEEcCCCeEEEEECCCCeeEEEEecc-CCCeEEEEEcCCCCeEEEEEecC
Q 011924 405 MATAEPADFVHVYDVKSGYEKEQEIDF-FGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 405 la~~~~dg~i~iwd~~~~~~~~~~~~~-~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
|++++.++.|..+|.++|+.+...... ...+..+... +..|+++..++
T Consensus 280 l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g 328 (376)
T 3q7m_A 280 IYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEG 328 (376)
T ss_dssp EEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTS
T ss_pred EEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCC
Confidence 788888899999999999877665422 2223333332 44666665554
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.83 E-value=1.3e-05 Score=73.64 Aligned_cols=217 Identities=7% Similarity=-0.020 Sum_probs=131.4
Q ss_pred cEEEEEecCceEEEEeCCCCCceE--EEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeec-c
Q 011924 200 KLLVAGGFQGELICKHLDRPGVSF--CSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF-P 276 (475)
Q Consensus 200 ~~lvsg~~dg~i~vw~~~~~~~~~--~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-~ 276 (475)
.+|+.+. .+.|+.++++...... ..............+++ ++.+..++++....+.|..+++........+.. .
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~--d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAF--DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEE--ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEE--ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 3455554 3578888887543210 00111111234567888 887777677777788999999976543322221 1
Q ss_pred ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEE-eCCCcEEEEECCCCceEEEeecCCCCeEEEEE
Q 011924 277 WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIV-GDNPDGLLVDSMTGKTIASLCGHLDFSFASAW 355 (475)
Q Consensus 277 ~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~ 355 (475)
.... +++++|++..|.++ ...+.|.++++........+.........+++
T Consensus 79 ~~p~-----------------------------~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~v 129 (267)
T 1npe_A 79 GSPE-----------------------------GIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVT 129 (267)
T ss_dssp CCEE-----------------------------EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred CCcc-----------------------------EEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEE
Confidence 2344 88999975555544 55678999998643322223222356789999
Q ss_pred ecCCCEEEEEeC---CCeEEEEECCCCCceEEEEe-cCCCceEEEEEccCCCEEEEE-cCCCeEEEEECCCCeeEEEEec
Q 011924 356 HPNGVTFATGNQ---DKTCRIWDLRNLSESVAVLK-GNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVKSGYEKEQEID 430 (475)
Q Consensus 356 sp~g~~l~t~s~---dg~v~iwd~~~~~~~~~~~~-~~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~~~~~~~~~~~~ 430 (475)
+|++..|+.+.. .+.|..+++.. .....+. ........++++|++..|+.+ ...+.|.++|+..... ..+..
T Consensus 130 d~~~g~lyv~~~~~~~~~I~~~~~dg--~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~ 206 (267)
T 1npe_A 130 DPVRGNLYWTDWNRDNPKIETSHMDG--TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-RKVLE 206 (267)
T ss_dssp ETTTTEEEEEECCSSSCEEEEEETTS--CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-EEEEE
T ss_pred eeCCCEEEEEECCCCCcEEEEEecCC--CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce-EEEec
Confidence 996665555544 36888888853 2223332 333467899999987766555 4568999999875433 33333
Q ss_pred cCCCeEEEEEcCCCCeEEEEEec
Q 011924 431 FFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 431 ~~~~i~~l~fspdg~~l~~~~~D 453 (475)
......+++. ++..|+++.+.
T Consensus 207 ~~~~P~gi~~--d~~~lyva~~~ 227 (267)
T 1npe_A 207 GLQYPFAVTS--YGKNLYYTDWK 227 (267)
T ss_dssp CCCSEEEEEE--ETTEEEEEETT
T ss_pred CCCCceEEEE--eCCEEEEEECC
Confidence 3345567765 45677777654
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.79 E-value=2.2e-06 Score=77.57 Aligned_cols=180 Identities=8% Similarity=0.063 Sum_probs=124.0
Q ss_pred EEEEEE-cCcEEEEEecCc--eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe
Q 011924 192 VSTLAV-KDKLLVAGGFQG--ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (475)
Q Consensus 192 v~~l~~-~~~~lvsg~~dg--~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~ 268 (475)
...|.+ ++.++++.|.+| .|+++|+.+.+......+ ....---.+++ .++.++++.-.++.+.+||..+.+
T Consensus 45 tqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~----~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISD----WKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEE----ETTEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEE----eCCEEEEEEeeCCEEEEEECccCc
Confidence 445666 666666777766 899999998776643322 21111123444 455656666678999999999999
Q ss_pred eeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecC--
Q 011924 269 LSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGH-- 346 (475)
Q Consensus 269 ~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h-- 346 (475)
.+.++..+. . ...++++++.|+++..++.|.++|..+.+.+.++.-.
T Consensus 119 ~~~ti~~~~--e-----------------------------G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~ 167 (262)
T 3nol_A 119 QVRSFNYDG--E-----------------------------GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAH 167 (262)
T ss_dssp EEEEEECSS--C-----------------------------CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEET
T ss_pred EEEEEECCC--C-----------------------------ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccC
Confidence 999988543 2 2234467777777766788999999999988887642
Q ss_pred C---CCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecC------------CCceEEEEEccCCCEEEEEcC
Q 011924 347 L---DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN------------LGAIRSIRYTSDGRYMATAEP 410 (475)
Q Consensus 347 ~---~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~------------~~~v~~l~~spdg~~la~~~~ 410 (475)
. ..+..+.|. +|++.+..-.+..|.+.|.++ ++.+..+... ....+.|||+|+++.|.+.+.
T Consensus 168 g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 168 GEELPELNELEWV-DGEIFANVWQTNKIVRIDPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CccccccceeEEE-CCEEEEEEccCCeEEEEECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 1 334567776 776555555688999999977 7777777642 124578999998877766664
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.78 E-value=8.9e-06 Score=76.54 Aligned_cols=222 Identities=11% Similarity=0.067 Sum_probs=135.7
Q ss_pred EEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeC-CC-eEEEEECCCC
Q 011924 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN-DC-GVRDFDMGKY 267 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~-dg-~v~iwd~~~~ 267 (475)
...+++ +++++++-..++.|..++.... .. ... ........+++ .++|+. +++... ++ .|..++..++
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~--~~~--~~~~~p~gia~--~~dG~l-~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDGN-QQ--IHA--TVEGKVSGLAF--TSNGDL-VATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCC-EE--EEE--ECSSEEEEEEE--CTTSCE-EEEEECTTSCEEEEEECTTS
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCCc-eE--EEE--eCCCCceeEEE--cCCCcE-EEEeccCCcceEEEEcCCCC
Confidence 456677 6777777667899998887642 22 111 12345778888 999984 555433 22 4667777777
Q ss_pred eeeeeeecc--ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCce-EEEee
Q 011924 268 QLSKHFRFP--WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT-IASLC 344 (475)
Q Consensus 268 ~~~~~~~~~--~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~-~~~l~ 344 (475)
+.......+ .... .++..+.+..+++-...+.|+.+|..+++. +....
T Consensus 106 ~~~~~~~~~~~~~~~-----------------------------g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 106 TVETLLTLPDAIFLN-----------------------------GITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp CEEEEEECTTCSCEE-----------------------------EEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEeCCCccccC-----------------------------cccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 654333221 1122 455556665555544678899999775532 21111
Q ss_pred ---------cCCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCCCc--eEEEEecCCCceEEEEEccCCCEEEEEcCCC
Q 011924 345 ---------GHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSE--SVAVLKGNLGAIRSIRYTSDGRYMATAEPAD 412 (475)
Q Consensus 345 ---------~h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~~~--~~~~~~~~~~~v~~l~~spdg~~la~~~~dg 412 (475)
+.......+ +|+++.|+.+. ..+.|.++++...+. ....+.. ......++++++|+++++....+
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~ 233 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYN 233 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTC
T ss_pred CccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCC
Confidence 111234555 88887666554 567999999863121 1122221 13456799999998877776778
Q ss_pred eEEEEECCCCeeEEE--EeccCCCeEEEEEc---CCCCeEEEEEecC
Q 011924 413 FVHVYDVKSGYEKEQ--EIDFFGEISGISFS---PDTESLFIGVWDR 454 (475)
Q Consensus 413 ~i~iwd~~~~~~~~~--~~~~~~~i~~l~fs---pdg~~l~~~~~D~ 454 (475)
.|.++|.. |+.... +......+.+++|. |++..|+++...+
T Consensus 234 ~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 234 SVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred eEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 99999965 554322 22223568999999 8999999887654
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.74 E-value=6.1e-07 Score=85.04 Aligned_cols=213 Identities=10% Similarity=0.054 Sum_probs=133.8
Q ss_pred eEEEEEE-cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCee
Q 011924 191 QVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (475)
Q Consensus 191 ~v~~l~~-~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~ 269 (475)
.+.++.. .+..|..|+.+ |..++. +..... .............+ . ++ . +..++.++.|..+|.. ++.
T Consensus 61 ~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~---~~~~~~~~~~~~~~--~-~~-~-l~v~t~~~~l~~~d~~-g~~ 128 (330)
T 3hxj_A 61 IECRPSIGKDGTIYFGSDK--VYAINP-DGTEKW---RFDTKKAIVSDFTI--F-ED-I-LYVTSMDGHLYAINTD-GTE 128 (330)
T ss_dssp EEECCEETTTTEECCSSCE--EEEECC-CGGGGG---GSCC-----CCEEE--E-TT-E-EEEECTTSEEEEECTT-SCE
T ss_pred cccceEEecCCcEEEecCc--EEEECC-CCcEEE---EEECCCCcccCceE--E-CC-E-EEEEecCCEEEEEcCC-CCE
Confidence 4566666 35566666655 777775 222211 11111222333344 2 44 3 6667788999999988 666
Q ss_pred eeeeecc-ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCC
Q 011924 270 SKHFRFP-WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLD 348 (475)
Q Consensus 270 ~~~~~~~-~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~ 348 (475)
...+... ..+. ++...+++. +.+++.++.+..+|.. ++.+..+.....
T Consensus 129 ~~~~~~~~~~~~-----------------------------~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~ 177 (330)
T 3hxj_A 129 KWRFKTKKAIYA-----------------------------TPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDA 177 (330)
T ss_dssp EEEEECSSCCCS-----------------------------CCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSC
T ss_pred EEEEcCCCceee-----------------------------eeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCC
Confidence 5555432 2233 566777777 5557777899999998 888777776666
Q ss_pred CeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEE
Q 011924 349 FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE 428 (475)
Q Consensus 349 ~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~ 428 (475)
.+.++...+++.+.+.. +.|..+| .+ ++.+.........+.++...++|++. +++.++.|..+| .++..+..+
T Consensus 178 ~~~~~~~d~~g~l~v~t---~~l~~~d-~~-g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t~~~gl~~~~-~~g~~~~~~ 250 (330)
T 3hxj_A 178 ITSAASIGKDGTIYFGS---DKVYAIN-PD-GTEKWNFYAGYWTVTRPAISEDGTIY-VTSLDGHLYAIN-PDGTEKWRF 250 (330)
T ss_dssp CCSCCEECTTCCEEEES---SSEEEEC-TT-SCEEEEECCSSCCCSCCEECTTSCEE-EEETTTEEEEEC-TTSCEEEEE
T ss_pred ceeeeEEcCCCEEEEEe---CEEEEEC-CC-CcEEEEEccCCcceeceEECCCCeEE-EEcCCCeEEEEC-CCCCEeEEe
Confidence 67778887888755444 7799999 44 55555555555668888899888654 455677788888 466666555
Q ss_pred eccCCCeEEEEEcCCCCeEEEEEecC
Q 011924 429 IDFFGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 429 ~~~~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
......+..+.+.++| .|++++.++
T Consensus 251 ~~~~~~~~~~~~~~~g-~l~v~t~~g 275 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTD-TIYFGSYDG 275 (330)
T ss_dssp ECSSCCCSCCEECTTS-CEEEECTTC
T ss_pred eCCCCccccceEcCCC-eEEEecCCC
Confidence 5444445566666666 455665553
No 248
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.74 E-value=3.6e-05 Score=74.95 Aligned_cols=252 Identities=9% Similarity=-0.024 Sum_probs=150.7
Q ss_pred ceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE---cCcEEEEEecCce
Q 011924 134 RNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGFQGE 210 (475)
Q Consensus 134 r~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~~lvsg~~dg~ 210 (475)
+.+........|+++....|...+........++. .+ .....++| .+.++++-...+.
T Consensus 79 ~~C~~~~~~~~l~~~~~~~I~~i~~~~~~~~~~~~-----------------~~--~~~~gl~~d~~~~~ly~~D~~~~~ 139 (386)
T 3v65_B 79 RSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLN-----------------NL--ENAIALDFHHRRELVFWSDVTLDR 139 (386)
T ss_dssp SCEEECSSCCEEEEECBSCEEEECTTSCCCEEEEC-----------------SC--SCEEEEEEETTTTEEEEEETTTTE
T ss_pred CeECCccccceeEeecCccceeeccCCCcEEEEec-----------------CC--CccEEEEEecCCCeEEEEeCCCCc
Confidence 44444334456667777778777765544333321 11 13567777 3445556667788
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceEE
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCIIL 289 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l~ 289 (475)
|..++++..... .+..........+++ .+.+..++++-...+.|.+.++........+. .....+
T Consensus 140 I~r~~~~g~~~~---~~~~~~~~~p~glav--d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~--------- 205 (386)
T 3v65_B 140 ILRANLNGSNVE---EVVSTGLESPGGLAV--DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPR--------- 205 (386)
T ss_dssp EEEEETTSCCEE---EEECSSCSCCCCEEE--ETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEE---------
T ss_pred EEEEecCCCCcE---EEEeCCCCCccEEEE--EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCc---------
Confidence 999988755433 222222223456777 76666667777777888888886533222222 112334
Q ss_pred EEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe-CC-CcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEE-e
Q 011924 290 LCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG-DN-PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG-N 366 (475)
Q Consensus 290 ~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~d-g~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~-s 366 (475)
.++++|.+..|..+. .. +.|..+++..................++|+|++..|+.+ +
T Consensus 206 --------------------giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 206 --------------------AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp --------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEET
T ss_pred --------------------EEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEEC
Confidence 889998666555543 33 678888876433333333344567899999866656555 4
Q ss_pred CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEE
Q 011924 367 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF 440 (475)
Q Consensus 367 ~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~f 440 (475)
..+.|..+|+.. ......+.........+++ ..+.++++-...+.|..++..+|..+..+......+.+|++
T Consensus 266 ~~~~I~~~d~dG-~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 266 KHHVIERANLDG-SHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp TTTEEEEECTTS-CSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CCCEEEEEeCCC-CeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 567899999864 3333334333445678888 44556666667789999997777766666544344455544
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.73 E-value=9e-05 Score=71.05 Aligned_cols=251 Identities=9% Similarity=-0.024 Sum_probs=148.2
Q ss_pred ceeEEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE---cCcEEEEEecCce
Q 011924 134 RNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGFQGE 210 (475)
Q Consensus 134 r~l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~~lvsg~~dg~ 210 (475)
+.+........++++....|...+........++. .+ .....++| .+.++++-...+.
T Consensus 36 ~~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~~~~~-----------------~~--~~~~~l~~d~~~~~ly~~D~~~~~ 96 (349)
T 3v64_C 36 RSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLN-----------------NL--ENAIALDFHHRRELVFWSDVTLDR 96 (349)
T ss_dssp SCEEESSSCCEEEEECBSCEEEECTTSCCEEEEEC-----------------SC--SCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcccccccCceeEeecccceEEEeCCCCeeEEeec-----------------CC--CceEEEEEeccccEEEEEeccCCc
Confidence 44444334456667777777777654433332221 11 13567777 3445556567788
Q ss_pred EEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceEE
Q 011924 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCIIL 289 (475)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l~ 289 (475)
|..+++...... .+..........+++ .+.+..++++-...+.|.+.++........+. .....+
T Consensus 97 I~r~~~~g~~~~---~~~~~~~~~p~glav--d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~--------- 162 (349)
T 3v64_C 97 ILRANLNGSNVE---EVVSTGLESPGGLAV--DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPR--------- 162 (349)
T ss_dssp EEEEETTSCSCE---EEECSSCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEE---------
T ss_pred eEEEecCCCCce---EEEeCCCCCccEEEE--ecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcc---------
Confidence 999988765433 222222233467777 76666667777777899999986543222221 122334
Q ss_pred EEEEeecccceEEEEeeeeeeEEECCCCcEEEEE-eCC-CcEEEEECCCCceEEEe-ecCCCCeEEEEEecCCCEEEEE-
Q 011924 290 LCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIV-GDN-PDGLLVDSMTGKTIASL-CGHLDFSFASAWHPNGVTFATG- 365 (475)
Q Consensus 290 ~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~d-g~i~iwd~~~~~~~~~l-~~h~~~v~~~~~sp~g~~l~t~- 365 (475)
.++++|.+..|..+ ... +.|..+++.. .....+ .........++++|++..|+.+
T Consensus 163 --------------------~iavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 163 --------------------AIALHPMEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp --------------------EEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred --------------------eEEEecCcCeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 88999965555544 344 7788888753 333333 2234567899999866666555
Q ss_pred eCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEE
Q 011924 366 NQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF 440 (475)
Q Consensus 366 s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~f 440 (475)
...+.|..+|+.. ......+.........+++ ..+.+.++-...+.|..++..+|.....+......+.++++
T Consensus 222 ~~~~~I~~~~~dG-~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 222 AKHHVIERANLDG-SHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp TTTTEEEEEETTS-CSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CCCCEEEEEeCCC-CceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 4567899999864 3323333333455678888 34555566666788999997677665555533333444443
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.72 E-value=1.8e-05 Score=71.86 Aligned_cols=192 Identities=8% Similarity=0.061 Sum_probs=128.0
Q ss_pred eecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc--ccEEeccCCceEEEEEEeecccceEEEE
Q 011924 227 TTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP--WPVNVSSSYCIILLCRLLNFMTEKVIIC 304 (475)
Q Consensus 227 ~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~--~~v~~s~~~~~l~~~~v~d~~~~~~~~~ 304 (475)
...+-...+..+++ +|+++.++++...++.|...|+. ++.++.+... ....
T Consensus 21 ~l~g~~~~lSGla~--~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~E------------------------ 73 (255)
T 3qqz_A 21 EIAGITNNISSLTW--SAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLE------------------------ 73 (255)
T ss_dssp ECTTCCSCEEEEEE--ETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEE------------------------
T ss_pred ECCCcccCcceeEE--eCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChH------------------------
Confidence 44455567899999 88887777778888999999997 8888877643 3445
Q ss_pred eeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCce---EEEee------cCCCCeEEEEEecCCCEEEEEeCCCeEEEEE
Q 011924 305 LLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT---IASLC------GHLDFSFASAWHPNGVTFATGNQDKTCRIWD 375 (475)
Q Consensus 305 ~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~---~~~l~------~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd 375 (475)
.+++.+++.++++.-.++.+.++++..... +.... ........++|+|.++.|+++.......||.
T Consensus 74 -----GIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 74 -----TIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYK 148 (255)
T ss_dssp -----EEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred -----HeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence 888999888767665677899998764432 22222 1223458999999887777776655445555
Q ss_pred CCC--CCceEEEEec-------CCCceEEEEEccC-CCEEEEEcCCCeEEEEECCCCeeEEEEeccC---------CCeE
Q 011924 376 LRN--LSESVAVLKG-------NLGAIRSIRYTSD-GRYMATAEPADFVHVYDVKSGYEKEQEIDFF---------GEIS 436 (475)
Q Consensus 376 ~~~--~~~~~~~~~~-------~~~~v~~l~~spd-g~~la~~~~dg~i~iwd~~~~~~~~~~~~~~---------~~i~ 436 (475)
+.. ....+..+.. ....+.+++++|. |++++.......|.++|.. |..+..+.-.. ....
T Consensus 149 ~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpE 227 (255)
T 3qqz_A 149 VNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAE 227 (255)
T ss_dssp EESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEE
T ss_pred EcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCC
Confidence 431 1122232211 2335689999995 4566666677889999965 55554443221 2678
Q ss_pred EEEEcCCCCeEEEEEe
Q 011924 437 GISFSPDTESLFIGVW 452 (475)
Q Consensus 437 ~l~fspdg~~l~~~~~ 452 (475)
+|+|.|+|+ |++.+.
T Consensus 228 Gia~d~~G~-lyIvsE 242 (255)
T 3qqz_A 228 GVAMDASGN-IYIVSE 242 (255)
T ss_dssp EEEECTTCC-EEEEET
T ss_pred eeEECCCCC-EEEEcC
Confidence 999999997 555543
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.72 E-value=1.7e-06 Score=78.25 Aligned_cols=178 Identities=11% Similarity=0.034 Sum_probs=123.8
Q ss_pred EEEEEE-cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeee
Q 011924 192 VSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (475)
Q Consensus 192 v~~l~~-~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~ 270 (475)
...|.+ ++.++++.+.+|.|+++|+.+.+..... +.. ..---.+++ .++.++++.-.++.+.+||..+.+.+
T Consensus 57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~-~~FgeGit~----~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLG-NIFAEGLAS----DGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECT-TCCEEEEEE----CSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC-CcceeEEEE----eCCEEEEEEccCCEEEEEECCcCcEE
Confidence 456777 5556667788899999999988876433 221 111123444 45555666667899999999999999
Q ss_pred eeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeec--CC-
Q 011924 271 KHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCG--HL- 347 (475)
Q Consensus 271 ~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~--h~- 347 (475)
.++.....-. .+.++++.|+++..++.|.++|..+.+.+.++.- +.
T Consensus 130 ~ti~~~~eGw-------------------------------GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~ 178 (268)
T 3nok_A 130 RTTRYSGEGW-------------------------------GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ 178 (268)
T ss_dssp EEEECSSCCC-------------------------------CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE
T ss_pred EEEeCCCcee-------------------------------EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc
Confidence 9988542212 3336778888877788999999999998887763 21
Q ss_pred --CCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecC-------------CCceEEEEEccCCCEEEEEc
Q 011924 348 --DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN-------------LGAIRSIRYTSDGRYMATAE 409 (475)
Q Consensus 348 --~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~-------------~~~v~~l~~spdg~~la~~~ 409 (475)
..+..+.|. +|.+.+..-.+..|.+.|.++ ++.+..+... ....+.|||+|+++.|.+.+
T Consensus 179 ~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 179 PVELINELECA-NGVIYANIWHSSDVLEIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTCSEEEEECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccccccEEe-CCEEEEEECCCCeEEEEeCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 245677776 776555554678999999977 7777777532 13568899999765454443
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.68 E-value=5.9e-05 Score=77.42 Aligned_cols=252 Identities=14% Similarity=0.064 Sum_probs=150.7
Q ss_pred EEcCcEEEEEecCceEEEEeCCCCCceEEEeeecCC-C-CceeEEEEEeCCCCCeEEEEEeC-----CCeEEEEECCCCe
Q 011924 196 AVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDD-N-AITNAVEIYGSPSGAVHFTASNN-----DCGVRDFDMGKYQ 268 (475)
Q Consensus 196 ~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~-~-~~v~~l~~~~s~~g~~~l~s~s~-----dg~v~iwd~~~~~ 268 (475)
++.+..+++++.+|.|..+|..+.+........... . .......+ . ++ .+++.++. ++.|..+|..+++
T Consensus 112 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 112 AYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--A-KD-TVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--E-TT-EEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--E-CC-EEEEEecCCccCCCCEEEEEECCCCc
Confidence 346778888889999999999887766544332110 0 11111112 1 34 33433332 7999999999999
Q ss_pred eeeeeecccc------------------------------------------EEeccCCceEE-----------------
Q 011924 269 LSKHFRFPWP------------------------------------------VNVSSSYCIIL----------------- 289 (475)
Q Consensus 269 ~~~~~~~~~~------------------------------------------v~~s~~~~~l~----------------- 289 (475)
.+..+....+ +.+.+....+.
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 8876652211 11111111221
Q ss_pred -----EEEEeecccceEEEEeee----------eeeE---EECCCCc---EEEEEeCCCcEEEEECCCCceEEEeecCC-
Q 011924 290 -----LCRLLNFMTEKVIICLLC----------LQHS---SQSPDGK---LLIIVGDNPDGLLVDSMTGKTIASLCGHL- 347 (475)
Q Consensus 290 -----~~~v~d~~~~~~~~~~~~----------i~~~---~~sp~g~---~l~~~~~dg~i~iwd~~~~~~~~~l~~h~- 347 (475)
.+..+|..+|+....... +... ...++|+ .+++++.+|.++++|..+|+.+.......
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 366677788877655431 1111 1123674 56778889999999999999887664221
Q ss_pred ------------CCe--------------------------EEEEEecCCCEEEEEe-----------------------
Q 011924 348 ------------DFS--------------------------FASAWHPNGVTFATGN----------------------- 366 (475)
Q Consensus 348 ------------~~v--------------------------~~~~~sp~g~~l~t~s----------------------- 366 (475)
.++ ..++++|+..+++..+
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 427 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGA 427 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccc
Confidence 111 2357888777777654
Q ss_pred --------------CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccC
Q 011924 367 --------------QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF 432 (475)
Q Consensus 367 --------------~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~ 432 (475)
.++.|..||+.+ ++.+-.+.... .+.+..+...+..+++++.++.|+.||.++|+.+..+....
T Consensus 428 ~~~~~~~~~~~~~~~~g~l~a~D~~t-G~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 428 TLAMYPGPNGPTKKEMGQIRAFDLTT-GKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp EEEEEECTTSTTSCCCEEEEEECTTT-CCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceeccCccccCCCCCCeEEEEECCC-CCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 247899999976 56554444322 22222233345677779999999999999999988776433
Q ss_pred CC-eEEEEEcCCCCeEEEEEecC
Q 011924 433 GE-ISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 433 ~~-i~~l~fspdg~~l~~~~~D~ 454 (475)
+. -..+.+..+|+.++ ++.++
T Consensus 506 ~~~~~p~~~~~~G~~yv-~~~~G 527 (571)
T 2ad6_A 506 GGIGSPMTYSFKGKQYI-GSMYG 527 (571)
T ss_dssp CCCSCCEEEEETTEEEE-EEEEC
T ss_pred CcEeeeEEEEECCEEEE-EEECC
Confidence 21 22344667776443 33343
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.65 E-value=0.00018 Score=73.89 Aligned_cols=296 Identities=15% Similarity=0.055 Sum_probs=166.0
Q ss_pred CCeEEEecC-CeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCceEEEEeCCCCC
Q 011924 142 KHDVYLMSH-FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPG 220 (475)
Q Consensus 142 ~~~v~~~~~-~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~ 220 (475)
...||+... ..|+-++..+++..-........... +. ..... ..+++.+..+++++.+|.|..+|..+.+
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~---~~--~~~~~----~g~a~~~~~v~~~t~dg~l~AlD~~TG~ 138 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIR---PC--CDVVN----RGAAIYGDKVFFGTLDASVVALNKNTGK 138 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCC---CS--SCSCC----CCCEEETTEEEEEETTTEEEEEESSSCC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccc---cc--cccCC----CccEEECCEEEEEeCCCEEEEEECCCCC
Confidence 345666544 56888888887664333332111000 00 00000 1223466788888899999999998887
Q ss_pred ceEEEeeecCCC--CceeEEEEEeC-CCCCeEEEEEe------CCCeEEEEECCCCeeeeeeeccc--------------
Q 011924 221 VSFCSRTTYDDN--AITNAVEIYGS-PSGAVHFTASN------NDCGVRDFDMGKYQLSKHFRFPW-------------- 277 (475)
Q Consensus 221 ~~~~~~~~~~~~--~~v~~l~~~~s-~~g~~~l~s~s------~dg~v~iwd~~~~~~~~~~~~~~-------------- 277 (475)
............ .......+... .+|+.++++++ .++.|..+|..+++.+-......
T Consensus 139 ~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~ 218 (582)
T 1flg_A 139 VVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVT 218 (582)
T ss_dssp EEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEES
T ss_pred EEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccc
Confidence 665444322100 11111112111 13332355543 37899999999988776554210
Q ss_pred -------------------------------cEEeccCCceE------------------------------EEEEEeec
Q 011924 278 -------------------------------PVNVSSSYCII------------------------------LLCRLLNF 296 (475)
Q Consensus 278 -------------------------------~v~~s~~~~~l------------------------------~~~~v~d~ 296 (475)
.+.+.+....+ ..+..+|.
T Consensus 219 g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~ 298 (582)
T 1flg_A 219 GDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDP 298 (582)
T ss_dssp SCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECT
T ss_pred cccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeC
Confidence 00111111111 23556677
Q ss_pred ccceEEEEeeee----------ee-EEEC---CCCc---EEEEEeCCCcEEEEECCCCceEEEeecCCC--Ce-------
Q 011924 297 MTEKVIICLLCL----------QH-SSQS---PDGK---LLIIVGDNPDGLLVDSMTGKTIASLCGHLD--FS------- 350 (475)
Q Consensus 297 ~~~~~~~~~~~i----------~~-~~~s---p~g~---~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~--~v------- 350 (475)
.+|+........ .. +.+. .+|+ .++.++.+|.++++|..+|+.+..+..... ..
T Consensus 299 ~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~ 378 (582)
T 1flg_A 299 SSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKT 378 (582)
T ss_dssp TTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTT
T ss_pred CCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccC
Confidence 788777654311 11 2222 4563 677888999999999999998876653210 00
Q ss_pred ------------------------------------EEEEEecCCCEEEEEe----------------------------
Q 011924 351 ------------------------------------FASAWHPNGVTFATGN---------------------------- 366 (475)
Q Consensus 351 ------------------------------------~~~~~sp~g~~l~t~s---------------------------- 366 (475)
..++++|+..++++..
T Consensus 379 g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 458 (582)
T 1flg_A 379 GRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIK 458 (582)
T ss_dssp CCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred CCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeec
Confidence 1346677555555432
Q ss_pred -----CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCe-EEEEE
Q 011924 367 -----QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEI-SGISF 440 (475)
Q Consensus 367 -----~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i-~~l~f 440 (475)
.+|.|..||+.+ ++.+-...... ++..-.....|.+++.++.|+.|+.||.++|+.+-++....+.. .-+.|
T Consensus 459 p~~~~~~G~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y 536 (582)
T 1flg_A 459 RMYDDHVGSLRAMDPVS-GKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITW 536 (582)
T ss_dssp ESCSSCSEEEEEECTTT-CCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred CCCCCCcceEEEEECCC-CCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEE
Confidence 257899999977 55544443322 22211122246678889999999999999999988877543322 23667
Q ss_pred cCCCCeEE
Q 011924 441 SPDTESLF 448 (475)
Q Consensus 441 spdg~~l~ 448 (475)
..+|+..+
T Consensus 537 ~~~G~qYv 544 (582)
T 1flg_A 537 EQDGEQYL 544 (582)
T ss_dssp EETTEEEE
T ss_pred EECCEEEE
Confidence 77886443
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.65 E-value=1.7e-05 Score=71.04 Aligned_cols=181 Identities=13% Similarity=0.064 Sum_probs=122.2
Q ss_pred eEEEEEE-cCcEEEEEecCc--eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 191 QVSTLAV-KDKLLVAGGFQG--ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 191 ~v~~l~~-~~~~lvsg~~dg--~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
....|.+ ++.++++.|..| .|+.+|+.+.+......+ ....---.+++ .++.+++..-.++.+.+||..+.
T Consensus 22 ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l--~~~~fgeGi~~----~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEV--PPPYFGAGIVA----WRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEEC--CTTCCEEEEEE----ETTEEEEEESSSSEEEEEETTTT
T ss_pred ccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeC--CCCcceeEEEE----eCCEEEEEEeeCCEEEEEECCcC
Confidence 3557778 444555656654 899999998776643322 11111123444 34555666668899999999999
Q ss_pred eeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCC
Q 011924 268 QLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL 347 (475)
Q Consensus 268 ~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~ 347 (475)
+.+.++..+.. ...+.+++..|+++..++.|.++|..+.+.+.++.-..
T Consensus 96 ~~~~ti~~~~~-------------------------------Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~ 144 (243)
T 3mbr_X 96 TPRARFRYPGE-------------------------------GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA 144 (243)
T ss_dssp EEEEEEECSSC-------------------------------CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred cEEEEEeCCCC-------------------------------ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc
Confidence 99999985432 22344567777777778899999999999888876421
Q ss_pred -----CCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecC-------------CCceEEEEEccCCCEEEEEc
Q 011924 348 -----DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN-------------LGAIRSIRYTSDGRYMATAE 409 (475)
Q Consensus 348 -----~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~-------------~~~v~~l~~spdg~~la~~~ 409 (475)
..+..+.|. +|+..+..-.+..|.+.|.++ ++.+..+... ....+.|+++|+++.|.+.+
T Consensus 145 ~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 145 GGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 345667765 676555554677999999987 7777776522 13567899999877666555
Q ss_pred C
Q 011924 410 P 410 (475)
Q Consensus 410 ~ 410 (475)
.
T Consensus 223 K 223 (243)
T 3mbr_X 223 K 223 (243)
T ss_dssp T
T ss_pred C
Confidence 3
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.65 E-value=4.6e-05 Score=79.86 Aligned_cols=272 Identities=14% Similarity=0.091 Sum_probs=156.8
Q ss_pred CCeEEEec-CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEec------CceEEEE
Q 011924 142 KHDVYLMS-HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGF------QGELICK 214 (475)
Q Consensus 142 ~~~v~~~~-~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~------dg~i~vw 214 (475)
...||+.. ++.++-++..+++..-......+. . .......++ +.+..++++.. +|.|..+
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~-~--------~~~~~~~P~----v~~~~v~vg~~~~~~~~~g~v~a~ 183 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPA-K--------PYSITGAPR----VVKGKVIIGNGGAEYGVRGFVSAY 183 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTT-S--------SCBCCSCCE----EETTEEEECCBCTTTCCBCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCC-C--------cceecCCCE----EECCEEEEeCCCCCcCCCCEEEEE
Confidence 34566654 788999999888765433332110 0 000111222 12445555543 5899999
Q ss_pred eCCCCCceEEEeeecCCC----------------------------CceeEEEEEeCCCCCeEEEEEeCCC---------
Q 011924 215 HLDRPGVSFCSRTTYDDN----------------------------AITNAVEIYGSPSGAVHFTASNNDC--------- 257 (475)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~----------------------------~~v~~l~~~~s~~g~~~l~s~s~dg--------- 257 (475)
|..+.+............ .....+++ .|.+.. ++.++.++
T Consensus 184 D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~--d~~~~~-vy~~~~~g~~w~~~~~~ 260 (668)
T 1kv9_A 184 DADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAY--DPELDL-LYVGTGNGSPWNREVRS 260 (668)
T ss_dssp ETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEE--ETTTTE-EEEECCCEESSCHHHHS
T ss_pred ECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEE--cCCCCE-EEEeCCCCCccccCCCC
Confidence 998887665444321110 01123455 676665 55665554
Q ss_pred ----------eEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCc---EEEEEe
Q 011924 258 ----------GVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGK---LLIIVG 324 (475)
Q Consensus 258 ----------~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~---~l~~~~ 324 (475)
.|..+|..+++.+.+++....-. |+....... . ...+..+|+ .+++++
T Consensus 261 ~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~-------------wd~~~~~~~----~--~~d~~~~G~~~~~v~~~~ 321 (668)
T 1kv9_A 261 PGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDS-------------WDFTATQQI----T--LAELNIDGKPRKVLMQAP 321 (668)
T ss_dssp TTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC-------------SCCCCCSCE----E--EEEEEETTEEEEEEEECC
T ss_pred CCCCCceeeeeEEEEcCCCCceeeEeecCCCcc-------------ccccCCCCc----E--EEEeccCCcEEEEEEEEC
Confidence 48999999999888776321000 000000000 0 112223564 678888
Q ss_pred CCCcEEEEECCCCceEEEeecCCC------------Ce------------------------EEEEEecCCCEEEEEe--
Q 011924 325 DNPDGLLVDSMTGKTIASLCGHLD------------FS------------------------FASAWHPNGVTFATGN-- 366 (475)
Q Consensus 325 ~dg~i~iwd~~~~~~~~~l~~h~~------------~v------------------------~~~~~sp~g~~l~t~s-- 366 (475)
.+|.++++|..+|+.+........ ++ ..++++|+..+++...
T Consensus 322 ~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~ 401 (668)
T 1kv9_A 322 KNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQE 401 (668)
T ss_dssp TTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEE
T ss_pred CCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccc
Confidence 999999999999998754432110 00 1267888766665421
Q ss_pred ----------------------------------CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCC
Q 011924 367 ----------------------------------QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD 412 (475)
Q Consensus 367 ----------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg 412 (475)
.+|.|..||+.+ ++.+-...... ++....+...|.++++++.++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t-G~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg 479 (668)
T 1kv9_A 402 VPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK-QKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAG 479 (668)
T ss_dssp CCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTS
T ss_pred cceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC-CcEEEEccCCC-CCcCceeEeCCCEEEEECCcc
Confidence 237899999977 66554444332 333334455677889999999
Q ss_pred eEEEEECCCCeeEEEEeccCCCe-EEEEEcCCCC-eEEEE
Q 011924 413 FVHVYDVKSGYEKEQEIDFFGEI-SGISFSPDTE-SLFIG 450 (475)
Q Consensus 413 ~i~iwd~~~~~~~~~~~~~~~~i-~~l~fspdg~-~l~~~ 450 (475)
.|++||.++|+.+..+....+.. .-+.+..+|+ +++++
T Consensus 480 ~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~ 519 (668)
T 1kv9_A 480 QMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIM 519 (668)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred cchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEE
Confidence 99999999999888776543211 2344556776 44443
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.63 E-value=2e-05 Score=74.60 Aligned_cols=220 Identities=11% Similarity=-0.026 Sum_probs=132.6
Q ss_pred EEEE--cCcEEEEEecCceEEEEeCCCCCceEEEeeecC-----------------CCCceeEEEEEeCC-CCCeEEEEE
Q 011924 194 TLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-----------------DNAITNAVEIYGSP-SGAVHFTAS 253 (475)
Q Consensus 194 ~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~-----------------~~~~v~~l~~~~s~-~g~~~l~s~ 253 (475)
++++ ++++++++..++.|..|+........ ...... .......+++ .+ +|. |+.+
T Consensus 23 ~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~--~~~~g~--l~v~ 97 (322)
T 2fp8_A 23 SFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISY--NLQNNQ--LYIV 97 (322)
T ss_dssp CEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE--ETTTTE--EEEE
T ss_pred EEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEE--cCCCCc--EEEE
Confidence 4555 66768888889999999876543221 111000 0123567777 76 554 4444
Q ss_pred eCCCeEEEEECCCCeeeeeee-c--c---ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeC-
Q 011924 254 NNDCGVRDFDMGKYQLSKHFR-F--P---WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGD- 325 (475)
Q Consensus 254 s~dg~v~iwd~~~~~~~~~~~-~--~---~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~- 325 (475)
...+.|..++..++... .+. . . ...+ .+++.| +|++.++-..
T Consensus 98 d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~-----------------------------~i~~d~~~G~l~v~d~~~ 147 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLY-----------------------------AVTVDQRTGIVYFTDVST 147 (322)
T ss_dssp ETTTEEEEECTTCEECE-EEESEETTEECSCEE-----------------------------EEEECTTTCCEEEEESCS
T ss_pred ECCCCEEEEeCCCCEEE-EecccCCCCcccccc-----------------------------eEEEecCCCEEEEECCcc
Confidence 34556888887655432 221 1 0 1233 789999 9987776432
Q ss_pred ----------------CCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEE-eCCCeEEEEECCCCC-ceEEEEe
Q 011924 326 ----------------NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG-NQDKTCRIWDLRNLS-ESVAVLK 387 (475)
Q Consensus 326 ----------------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~-s~dg~v~iwd~~~~~-~~~~~~~ 387 (475)
.+.|..+|..+++...... .......++|+|+++.|+.+ ...+.|.+|++.... .....+.
T Consensus 148 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~ 226 (322)
T 2fp8_A 148 LYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV 226 (322)
T ss_dssp SCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE
T ss_pred cccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE
Confidence 3678889987776433222 22345679999999866665 456899999986311 1122222
Q ss_pred cCCCceEEEEEccCCCEEEEEcC----------CCeEEEEECCCCeeEEEEeccC----CCeEEEEEcCCCCeEEEEEec
Q 011924 388 GNLGAIRSIRYTSDGRYMATAEP----------ADFVHVYDVKSGYEKEQEIDFF----GEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 388 ~~~~~v~~l~~spdg~~la~~~~----------dg~i~iwd~~~~~~~~~~~~~~----~~i~~l~fspdg~~l~~~~~D 453 (475)
...+ ...++++++|++.++... .+.|..+|. .++.+..+.... ..++++++. + ..|++++..
T Consensus 227 ~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~~~~ 302 (322)
T 2fp8_A 227 KIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEH-D-GLLYIGTLF 302 (322)
T ss_dssp ECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEE-T-TEEEEECSS
T ss_pred eCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEe-C-CEEEEeecC
Confidence 2233 778999999986666544 467888886 476666665432 357777773 4 466666543
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.62 E-value=8.2e-06 Score=85.53 Aligned_cols=294 Identities=13% Similarity=0.025 Sum_probs=162.8
Q ss_pred CCeEEEe-cCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCcccccccee-EEEEEEcCcEEEEEecCceEEEEeCCCC
Q 011924 142 KHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQ-VSTLAVKDKLLVAGGFQGELICKHLDRP 219 (475)
Q Consensus 142 ~~~v~~~-~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~lvsg~~dg~i~vw~~~~~ 219 (475)
...||+. .++.|+-++..+++..-..+....... ........ -..+++.+..+++++.+|.|..+|..+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG 137 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVK--------ARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTG 137 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGG--------GGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccc--------cccccccCCccceEEECCEEEEEcCCCEEEEEECCCC
Confidence 3456654 456788888887765433322211000 00000000 1123445678888889999999999888
Q ss_pred CceEEEeeecCC-CCce-eEEEEEeCCCCCeEEEEEe-----CCCeEEEEECCCCeeeeeeecc-c-cEE-eccCCceEE
Q 011924 220 GVSFCSRTTYDD-NAIT-NAVEIYGSPSGAVHFTASN-----NDCGVRDFDMGKYQLSKHFRFP-W-PVN-VSSSYCIIL 289 (475)
Q Consensus 220 ~~~~~~~~~~~~-~~~v-~~l~~~~s~~g~~~l~s~s-----~dg~v~iwd~~~~~~~~~~~~~-~-~v~-~s~~~~~l~ 289 (475)
+........... ...+ ....+ . ++ .+++..+ .++.|..+|..+++.+..+... . +.. +.. .....
T Consensus 138 ~~~W~~~~~~~~~~~~~~~~P~v--~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~-~~~~~ 212 (668)
T 1kv9_A 138 KAIWSQQTTDPAKPYSITGAPRV--V-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEH-PELRE 212 (668)
T ss_dssp CEEEEEECSCTTSSCBCCSCCEE--E-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSS-HHHHH
T ss_pred CEeeeeccCCCCCcceecCCCEE--E-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccc-ccccc
Confidence 766544432110 0111 11111 1 34 3233322 2589999999999998877531 1 100 000 00000
Q ss_pred EE------EEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCC-------------------cEEEEECCCCceEEEee
Q 011924 290 LC------RLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNP-------------------DGLLVDSMTGKTIASLC 344 (475)
Q Consensus 290 ~~------~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg-------------------~i~iwd~~~~~~~~~l~ 344 (475)
.. .+|.... .......++++|.+.++++++.++ .|..+|..+|+.+..++
T Consensus 213 ~~~~~~g~~~w~~~~-----gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~ 287 (668)
T 1kv9_A 213 AAKTWQGDQYWKLGG-----GGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQ 287 (668)
T ss_dssp HHTTCCSSCHHHHCE-----ECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE
T ss_pred ccccCCccceeeeCC-----CCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEee
Confidence 00 0000000 000111468888888888887665 39999999999988876
Q ss_pred c--CC-------CCeEEEEEecCCC---EEEEEeCCCeEEEEECCCCCceEEEEecCC-----------C-c--------
Q 011924 345 G--HL-------DFSFASAWHPNGV---TFATGNQDKTCRIWDLRNLSESVAVLKGNL-----------G-A-------- 392 (475)
Q Consensus 345 ~--h~-------~~v~~~~~sp~g~---~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~-----------~-~-------- 392 (475)
. |. .+.....+..+|+ .++.++.+|.+.++|.++ ++.+....... + +
T Consensus 288 ~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~ 366 (668)
T 1kv9_A 288 VTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRY 366 (668)
T ss_dssp SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCCSEEEECTTTCCEEECTTTTC
T ss_pred cCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC-CCEeccccccccccccccccccCCccccccccc
Confidence 4 22 2222233334675 688999999999999977 66553332111 0 0
Q ss_pred ----------------eEEEEEccCCCEEEEE------------------------------------cCCCeEEEEECC
Q 011924 393 ----------------IRSIRYTSDGRYMATA------------------------------------EPADFVHVYDVK 420 (475)
Q Consensus 393 ----------------v~~l~~spdg~~la~~------------------------------------~~dg~i~iwd~~ 420 (475)
-..++++|+...+++. ..+|.|..||+.
T Consensus 367 ~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~ 446 (668)
T 1kv9_A 367 EKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPV 446 (668)
T ss_dssp SSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETT
T ss_pred cCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCC
Confidence 0126788876665541 123789999999
Q ss_pred CCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 421 SGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 421 ~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
+|+.+-+.... .+.....+...+..|++++.|+.
T Consensus 447 tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~ 480 (668)
T 1kv9_A 447 KQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQ 480 (668)
T ss_dssp TTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSE
T ss_pred CCcEEEEccCC-CCCcCceeEeCCCEEEEECCccc
Confidence 99887666533 33334445556778888866554
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.57 E-value=0.00017 Score=77.17 Aligned_cols=221 Identities=10% Similarity=-0.026 Sum_probs=142.4
Q ss_pred cceeEEEEEE-cCcEEEEEecCceEEEEeCCCCCceEEEeee---cCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEE
Q 011924 188 TQTQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTT---YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFD 263 (475)
Q Consensus 188 ~~~~v~~l~~-~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~---~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd 263 (475)
....|.++.. ....|-.|+.++.|..++............. .-....|.++.. .++|. +-.|+.++.|..|+
T Consensus 308 ~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~--d~~g~--lWiGt~~~Gl~~~~ 383 (795)
T 4a2l_A 308 SQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE--DKDKN--LWIGTNDGGLNLYN 383 (795)
T ss_dssp SSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEE--CTTSC--EEEEESSSCEEEEC
T ss_pred CCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEE--CCCCC--EEEEECCCCeEEEc
Confidence 3457899988 4456777888788888886544322110000 012345777776 77775 55677887899999
Q ss_pred CCCCeeeeeeec---------cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEEC
Q 011924 264 MGKYQLSKHFRF---------PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDS 334 (475)
Q Consensus 264 ~~~~~~~~~~~~---------~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~ 334 (475)
..+++....... ...|. ++...++|++|.+|+.++-|.++|.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~l~~~~v~-----------------------------~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 384 PITQRFTSYTLQEDESARGIGSNNIK-----------------------------AVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp TTTCCEEEECCC------CCSCSCEE-----------------------------EEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCCCcEEEEecCCCCcccCCCCccEE-----------------------------EEEEcCCCCEEEEEeCcCceeEEeC
Confidence 877654332211 12344 8888888885666777777999998
Q ss_pred CCCceEEEee----cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEec-------CCCceEEEEEccCCC
Q 011924 335 MTGKTIASLC----GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG-------NLGAIRSIRYTSDGR 403 (475)
Q Consensus 335 ~~~~~~~~l~----~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~-------~~~~v~~l~~spdg~ 403 (475)
.+++...... .....|.++...++|++.+.. .. -+.+||..+ ++ ...+.. ....|.++...++|+
T Consensus 435 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~-~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~ 510 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQ-RS-FTTIEKEKDGTPVVSKQITTLFRDSHKR 510 (795)
T ss_dssp TTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTT-TE-EEECCBCTTCCBCCCCCEEEEEECTTCC
T ss_pred CCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCC-Ce-EEEccccccccccCCceEEEEEECCCCC
Confidence 8876443221 134578999998888765554 44 488899864 33 222221 235789999999998
Q ss_pred EEEEEcCCCeEEEEECCCCeeEEEEe-------ccCCCeEEEEEcCCCCeEEE
Q 011924 404 YMATAEPADFVHVYDVKSGYEKEQEI-------DFFGEISGISFSPDTESLFI 449 (475)
Q Consensus 404 ~la~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~i~~l~fspdg~~l~~ 449 (475)
+.+... . -|..||..++.. .+. .....|.++..+++|...+.
T Consensus 511 lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWig 559 (795)
T 4a2l_A 511 LWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVG 559 (795)
T ss_dssp EEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEE
T ss_pred EEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEE
Confidence 666554 4 488999877654 222 12346899999999875543
No 259
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.57 E-value=0.00054 Score=64.59 Aligned_cols=230 Identities=10% Similarity=0.013 Sum_probs=136.5
Q ss_pred EEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cC-cEEEEEecCceEEEEeCCCC--
Q 011924 145 VYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KD-KLLVAGGFQGELICKHLDRP-- 219 (475)
Q Consensus 145 v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~-~~lvsg~~dg~i~vw~~~~~-- 219 (475)
|+++....|...+..+.....++.. + ....++++ .+ .++++-...+.|..+++...
T Consensus 4 ll~~~~~~I~~i~~~~~~~~~~~~~-----------------~--~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~ 64 (316)
T 1ijq_A 4 LFFTNRHEVRKMTLDRSEYTSLIPN-----------------L--RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG 64 (316)
T ss_dssp EEEECBSSEEEEETTSCCCEEEECS-----------------C--SSEEEEEEETTTTEEEEEETTTTEEEEEEC-----
T ss_pred EEEECCCeEEEEECCCcceEehhcC-----------------C--CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC
Confidence 5556666677777665544433211 1 13457777 33 45556566789999988751
Q ss_pred -CceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceEEEEEEeecc
Q 011924 220 -GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCIILLCRLLNFM 297 (475)
Q Consensus 220 -~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~ 297 (475)
... .......-.....+++ .+.+..++++-...+.|.++++........+. ......
T Consensus 65 ~~~~--~~~~~~~~~~p~glav--d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~----------------- 123 (316)
T 1ijq_A 65 VSSY--DTVISRDIQAPDGLAV--DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR----------------- 123 (316)
T ss_dssp ---C--EEEECSSCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEE-----------------
T ss_pred Cccc--EEEEeCCCCCcCEEEE--eecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcc-----------------
Confidence 111 1122222233467777 66555556776778899999986543322222 223344
Q ss_pred cceEEEEeeeeeeEEECCCCcEEEEEeC-C-CcEEEEECCCCceEEEe-ecCCCCeEEEEEecCCCEEEEEe-CCCeEEE
Q 011924 298 TEKVIICLLCLQHSSQSPDGKLLIIVGD-N-PDGLLVDSMTGKTIASL-CGHLDFSFASAWHPNGVTFATGN-QDKTCRI 373 (475)
Q Consensus 298 ~~~~~~~~~~i~~~~~sp~g~~l~~~~~-d-g~i~iwd~~~~~~~~~l-~~h~~~v~~~~~sp~g~~l~t~s-~dg~v~i 373 (475)
.++++|.+..|..+.. . +.|..+++. |+....+ ...-.....++++|++..|+.+. ..+.|..
T Consensus 124 ------------~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~ 190 (316)
T 1ijq_A 124 ------------AIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 190 (316)
T ss_dssp ------------EEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ------------eEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEE
Confidence 8899996665555443 2 678888875 4444443 23345688999999776666554 5678999
Q ss_pred EECCCCCceEEEE-ec--CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEec
Q 011924 374 WDLRNLSESVAVL-KG--NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430 (475)
Q Consensus 374 wd~~~~~~~~~~~-~~--~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~ 430 (475)
+|+.. .. .+.+ .. .......+++. .+.++++-...+.|..++..+|..+..+..
T Consensus 191 ~d~dg-~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 191 IDVNG-GN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EETTS-CS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred EecCC-Cc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 99863 22 2223 21 22345678885 455666666778999999877776655543
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.54 E-value=7.3e-06 Score=87.24 Aligned_cols=185 Identities=10% Similarity=0.020 Sum_probs=108.6
Q ss_pred ceeEEEEEeC-CCCCeEEEEEeCCC----eEEEEECCCC-eeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeee
Q 011924 234 ITNAVEIYGS-PSGAVHFTASNNDC----GVRDFDMGKY-QLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLC 307 (475)
Q Consensus 234 ~v~~l~~~~s-~~g~~~l~s~s~dg----~v~iwd~~~~-~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~ 307 (475)
.+....| | |+|+.++++.+.+| +|+++|+.++ +.+.. .......
T Consensus 175 ~~~~~~~--S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~--------------------------- 224 (751)
T 2xe4_A 175 DVMEVKP--APPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNG--------------------------- 224 (751)
T ss_dssp EEEEEEE--CTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECS---------------------------
T ss_pred EEeeeEe--cCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCcee---------------------------
Confidence 3556677 9 99998666655443 5999999988 63211 0011112
Q ss_pred eeeEEECCCCcEEEEEeCC-----CcEEEEECCCCce--EEEee-cCCCCeEEEEEecCCCEEEEEeC---CCeEEEEEC
Q 011924 308 LQHSSQSPDGKLLIIVGDN-----PDGLLVDSMTGKT--IASLC-GHLDFSFASAWHPNGVTFATGNQ---DKTCRIWDL 376 (475)
Q Consensus 308 i~~~~~sp~g~~l~~~~~d-----g~i~iwd~~~~~~--~~~l~-~h~~~v~~~~~sp~g~~l~t~s~---dg~v~iwd~ 376 (475)
.++|+|||+.|+....+ ..|+++++.++.. ...+. ........+.|+|||++|+..+. ...|.++|+
T Consensus 225 --~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 225 --EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp --CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred --eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 67899999888877654 3588888877642 23333 23345678899999998887663 346888998
Q ss_pred CCCCceE--EEEe-cCCCceEEEEEccCCCEEE-EEcCC----CeEEEEECCCCeeEEE-EeccCC--CeEEEEEcCCCC
Q 011924 377 RNLSESV--AVLK-GNLGAIRSIRYTSDGRYMA-TAEPA----DFVHVYDVKSGYEKEQ-EIDFFG--EISGISFSPDTE 445 (475)
Q Consensus 377 ~~~~~~~--~~~~-~~~~~v~~l~~spdg~~la-~~~~d----g~i~iwd~~~~~~~~~-~~~~~~--~i~~l~fspdg~ 445 (475)
....... ..+. ...+...++.|+. |+.|+ ....+ ..|..+++.++..... +..+.. .+.++.+ .+.
T Consensus 303 ~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~ 379 (751)
T 2xe4_A 303 RKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSN 379 (751)
T ss_dssp SSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSS
T ss_pred CCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECC
Confidence 7632222 3333 3334455555544 55444 44333 3677788765322222 333443 3445554 455
Q ss_pred eEEEEEec
Q 011924 446 SLFIGVWD 453 (475)
Q Consensus 446 ~l~~~~~D 453 (475)
.|+.....
T Consensus 380 ~lv~~~~~ 387 (751)
T 2xe4_A 380 YLVVAGRR 387 (751)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 66655443
No 261
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.53 E-value=0.00037 Score=65.81 Aligned_cols=204 Identities=6% Similarity=-0.025 Sum_probs=124.8
Q ss_pred eEEEEEE---cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 191 ~v~~l~~---~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
...+|+| .+.++++-...+.|..+++....... ......-.....+++ .+.+..++++-...+.|.++++...
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~--~~~~~~l~~p~glav--d~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ--NVVVSGLLSPDGLAC--DWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC--EEEEECCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE--EEEcCCCCCccEEEE--EcCCCeEEEEECCCCEEEEEECCCC
Confidence 4567788 35566666677899999887553211 111112223466777 6655555777667789999998653
Q ss_pred eeeeee-eccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe--CCCcEEEEECCCCceEEEe-
Q 011924 268 QLSKHF-RFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG--DNPDGLLVDSMTGKTIASL- 343 (475)
Q Consensus 268 ~~~~~~-~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~--~dg~i~iwd~~~~~~~~~l- 343 (475)
.....+ ......+ .+++.|.+..|..+. ..+.|...++. |+....+
T Consensus 112 ~~~~l~~~~~~~P~-----------------------------giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~ 161 (318)
T 3sov_A 112 LRKVLFWQELDQPR-----------------------------AIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIII 161 (318)
T ss_dssp SCEEEECSSCSSEE-----------------------------EEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEE
T ss_pred cEEEEEeCCCCCcc-----------------------------EEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEE
Confidence 322222 1222334 888998655555554 35778888875 3333333
Q ss_pred ecCCCCeEEEEEecCCCEEEEE-eCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q 011924 344 CGHLDFSFASAWHPNGVTFATG-NQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422 (475)
Q Consensus 344 ~~h~~~v~~~~~sp~g~~l~t~-s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~ 422 (475)
...-.....++|+|++..|+.+ +..+.|..+|+.. ......+.+.......+++.. +.++.+-...+.|..++..+|
T Consensus 162 ~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 162 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence 3334567899999966666655 4567899999863 222223333344566788753 345556666789999998777
Q ss_pred eeEEEEec
Q 011924 423 YEKEQEID 430 (475)
Q Consensus 423 ~~~~~~~~ 430 (475)
.....+..
T Consensus 240 ~~~~~i~~ 247 (318)
T 3sov_A 240 EGLREIHS 247 (318)
T ss_dssp CSCEEEEC
T ss_pred CceEEEeC
Confidence 76555543
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.46 E-value=0.0015 Score=63.83 Aligned_cols=246 Identities=9% Similarity=0.000 Sum_probs=145.5
Q ss_pred CCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE---cCcEEEEEecCceEEEEeCCC
Q 011924 142 KHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGFQGELICKHLDR 218 (475)
Q Consensus 142 ~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~~lvsg~~dg~i~vw~~~~ 218 (475)
...|+++....|...+........++. ....+.+|+| .+.++++-...+.|..+++..
T Consensus 83 ~~~ll~~~~~~I~~i~l~~~~~~~~~~-------------------~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g 143 (400)
T 3p5b_L 83 IAYLFFTNRHEVRKMTLDRSEYTSLIP-------------------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 143 (400)
T ss_dssp SCEEEEEETTEEEEECTTSCSCEEEEC-------------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred cceeEEeccceeEEEccCCcceeEecc-------------------ccCcceEEeeeeccCceEEEecCCCeEEEEEccc
Confidence 345666777777777765544433321 0124567787 344555555678898888864
Q ss_pred CC--ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-ccccEEeccCCceEEEEEEee
Q 011924 219 PG--VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNVSSSYCIILLCRLLN 295 (475)
Q Consensus 219 ~~--~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d 295 (475)
.. ... ..+..........|++ .+.+..++++-...+.|.+.++........+. ......
T Consensus 144 ~~~~~~~-~~~~~~~~~~p~glav--D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~--------------- 205 (400)
T 3p5b_L 144 AHGVSSY-DTVISRDIQAPDGLAV--DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR--------------- 205 (400)
T ss_dssp ----CCC-EEEECSSCSCEEEEEE--ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEE---------------
T ss_pred CCCCCcc-eEEEeCCCCCcccEEE--EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcc---------------
Confidence 22 111 1222223344567887 66555567777778899999987554333332 222344
Q ss_pred cccceEEEEeeeeeeEEECCCCcEEEEEe--CCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEe-CCCeEE
Q 011924 296 FMTEKVIICLLCLQHSSQSPDGKLLIIVG--DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN-QDKTCR 372 (475)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~sp~g~~l~~~~--~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s-~dg~v~ 372 (475)
.+++.|.+..|..+. ..+.|...++........+...-.....++++|++..|+.+. ..+.|.
T Consensus 206 --------------~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~ 271 (400)
T 3p5b_L 206 --------------AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 271 (400)
T ss_dssp --------------EEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred --------------eEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEE
Confidence 889999665555553 247788888764333333343446789999999777666664 467899
Q ss_pred EEECCCCCceEEEEec--CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEE
Q 011924 373 IWDLRNLSESVAVLKG--NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF 440 (475)
Q Consensus 373 iwd~~~~~~~~~~~~~--~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~f 440 (475)
.+|+.. ......+.. .......+++. .+.++.+....+.|..+|..+|..+..+......+.++..
T Consensus 272 ~~d~dG-~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 272 SIDVNG-GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEETTS-CCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEeCCC-CccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 999864 222222222 22345577773 3445556666788999998888766666544444555543
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.45 E-value=0.00061 Score=72.89 Aligned_cols=219 Identities=11% Similarity=0.055 Sum_probs=141.1
Q ss_pred ceeEEEEEE-cCcEEEEEecCceEEEEeCCCCCceEEEeeec-------CCCCceeEEEEEeCCCCCeEEEEEeCCCeEE
Q 011924 189 QTQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTY-------DDNAITNAVEIYGSPSGAVHFTASNNDCGVR 260 (475)
Q Consensus 189 ~~~v~~l~~-~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~-------~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~ 260 (475)
...|.++.. ....|..|+.. .|.+++....... .... -....|.++.. .++|. +-.|+.++.|.
T Consensus 262 ~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~---~~~~~~~~~~~l~~~~i~~i~~--D~~g~--lWigt~~~Gl~ 333 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFA---SYSSNPVENGSLSQRSVRSIFM--DSQGG--MWLGTYFGGLN 333 (795)
T ss_dssp CSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEE---EECCCTTSTTSCSSSCEEEEEE--CTTSC--EEEEESSSCEE
T ss_pred CCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEE---EEecCCCCCCCCCCCcEEEEEE--eCCcC--EEEEECCCCeE
Confidence 346889988 34556666665 5888887644322 1111 12345777777 88886 56677778899
Q ss_pred EEECCCCeeeeeeec--------cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEE
Q 011924 261 DFDMGKYQLSKHFRF--------PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLV 332 (475)
Q Consensus 261 iwd~~~~~~~~~~~~--------~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iw 332 (475)
.|+..+.... .+.. ...|. ++...++|.+- +|+.++-|..|
T Consensus 334 ~~~~~~~~~~-~~~~~~~~~~l~~~~V~-----------------------------~i~~d~~g~lW-iGt~~~Gl~~~ 382 (795)
T 4a2l_A 334 YYHPIRNRFK-NIRNIPYKNSLSDNVVS-----------------------------CIVEDKDKNLW-IGTNDGGLNLY 382 (795)
T ss_dssp EECGGGGSSE-EECCCTTSSSCSCSSEE-----------------------------EEEECTTSCEE-EEESSSCEEEE
T ss_pred EeCCCcccce-EEcCCCCCCCCCCCeeE-----------------------------EEEECCCCCEE-EEECCCCeEEE
Confidence 9987654432 2211 22344 88888888755 46677679999
Q ss_pred ECCCCceEEEeec--------CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEec-----CCCceEEEEEc
Q 011924 333 DSMTGKTIASLCG--------HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG-----NLGAIRSIRYT 399 (475)
Q Consensus 333 d~~~~~~~~~l~~--------h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~-----~~~~v~~l~~s 399 (475)
+..+++....... ....|.+++..+++++|..|+.++-|.+||..+ ++ ...+.. ....|.++...
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~-~~-~~~~~~~~~~l~~~~v~~i~~d 460 (795)
T 4a2l_A 383 NPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS-GQ-VENFNQRNSQLVNENVYAILPD 460 (795)
T ss_dssp CTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT-CC-EEEECTTTSCCSCSCEEEEEEC
T ss_pred cCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC-Cc-EEEeecCCCCcCCCeeEEEEEC
Confidence 9887764432211 235789999988888577777777799999865 33 333321 23578999999
Q ss_pred cCCCEEEEEcCCCeEEEEECCCCeeEEEEec------cCCCeEEEEEcCCCCeEEEE
Q 011924 400 SDGRYMATAEPADFVHVYDVKSGYEKEQEID------FFGEISGISFSPDTESLFIG 450 (475)
Q Consensus 400 pdg~~la~~~~dg~i~iwd~~~~~~~~~~~~------~~~~i~~l~fspdg~~l~~~ 450 (475)
++|++.+... .| |.+||..++........ ....|.++...++|+..+.+
T Consensus 461 ~~g~lwigt~-~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 461 GEGNLWLGTL-SA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp SSSCEEEEES-SC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred CCCCEEEEec-Cc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 9998665544 44 99999887654322111 12568999999988755433
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.45 E-value=0.00034 Score=66.01 Aligned_cols=195 Identities=10% Similarity=0.002 Sum_probs=114.5
Q ss_pred eEEEEEEc--CcEEEEEecCceEEEEeCCCCCceEEEeeecC-CCCceeEEEEEeCC-CCCeEEEEEeC-----------
Q 011924 191 QVSTLAVK--DKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSP-SGAVHFTASNN----------- 255 (475)
Q Consensus 191 ~v~~l~~~--~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~-~~~~v~~l~~~~s~-~g~~~l~s~s~----------- 255 (475)
....++++ +..|+.+...+.|..++..............+ .....+.+++ .+ +|.. +++...
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~--d~~~G~l-~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTV--DQRTGIV-YFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEE--CTTTCCE-EEEESCSSCCTTCHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEE--ecCCCEE-EEECCccccccccccee
Confidence 35677773 45666665555677777653222211111111 1123567777 88 8864 444322
Q ss_pred ------CCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEE-eCCCc
Q 011924 256 ------DCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIV-GDNPD 328 (475)
Q Consensus 256 ------dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~dg~ 328 (475)
.+.|..||..+++...........+ .++++|+|+.|.++ ...+.
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~-----------------------------gia~~~dg~~lyv~d~~~~~ 208 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKELHVPG-----------------------------GAEVSADSSFVLVAEFLSHQ 208 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEEESCCC-----------------------------EEEECTTSSEEEEEEGGGTE
T ss_pred hcccCCCceEEEEeCCCCEEEEeccCCccCc-----------------------------ceEECCCCCEEEEEeCCCCe
Confidence 3567777776655432222111223 78999999876665 45688
Q ss_pred EEEEECCCCc--eEEEeecCCCCeEEEEEecCCCEEEEEeC----------CCeEEEEECCCCCceEEEEecCC----Cc
Q 011924 329 GLLVDSMTGK--TIASLCGHLDFSFASAWHPNGVTFATGNQ----------DKTCRIWDLRNLSESVAVLKGNL----GA 392 (475)
Q Consensus 329 i~iwd~~~~~--~~~~l~~h~~~v~~~~~sp~g~~l~t~s~----------dg~v~iwd~~~~~~~~~~~~~~~----~~ 392 (475)
|.++++.... ....+....+ ...+++.++|++.++... .+.|..+|.. ++.+..+.... ..
T Consensus 209 I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~--G~~~~~~~~~~g~~~~~ 285 (322)
T 2fp8_A 209 IVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF--GNILEVIPLPPPFAGEH 285 (322)
T ss_dssp EEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT--SCEEEEEECCTTTTTSC
T ss_pred EEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC--CCEEEEEECCCCCcccc
Confidence 9999987421 1222221223 788999999987766644 4568888863 56666665432 34
Q ss_pred eEEEEEccCCCEEEEEcCCCeEEEEECCC
Q 011924 393 IRSIRYTSDGRYMATAEPADFVHVYDVKS 421 (475)
Q Consensus 393 v~~l~~spdg~~la~~~~dg~i~iwd~~~ 421 (475)
++.+++ .+|+++++....+.|.++++..
T Consensus 286 ~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 286 FEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 667776 4666555555678899999764
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.45 E-value=0.00012 Score=75.21 Aligned_cols=250 Identities=9% Similarity=0.054 Sum_probs=149.8
Q ss_pred cCcEEEEEec-CceEEEEeC-CCCCceEEEeeecCCC--------CceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 198 KDKLLVAGGF-QGELICKHL-DRPGVSFCSRTTYDDN--------AITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 198 ~~~~lvsg~~-dg~i~vw~~-~~~~~~~~~~~~~~~~--------~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
.+..+++++. ++.|..+|. .+.+............ .....+.+ .+.. ++.++.|+.|..+|..++
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-v~v~~~dg~l~alD~~tG 135 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY----GAGQ-IVKKQANGHLLALDAKTG 135 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE----ETTE-EEEECTTSEEEEEETTTC
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE----ECCE-EEEEeCCCEEEEEECCCC
Confidence 3556666666 889999998 7777655433221100 00111233 2333 667778999999999999
Q ss_pred eeeeeeeccc-----cEEecc---CCceE-----------EEEEEeecccceEEEEeeee--------------------
Q 011924 268 QLSKHFRFPW-----PVNVSS---SYCII-----------LLCRLLNFMTEKVIICLLCL-------------------- 308 (475)
Q Consensus 268 ~~~~~~~~~~-----~v~~s~---~~~~l-----------~~~~v~d~~~~~~~~~~~~i-------------------- 308 (475)
+.+..+.... .+..+| .+.++ ..+..+|..+|+.+......
T Consensus 136 ~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 136 KINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred CEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence 9887665321 222111 22222 14677888888877654421
Q ss_pred ----------------------eeEEECCCCcEEEEEeCC----------------CcEEEEECCCCceEEEeec--CC-
Q 011924 309 ----------------------QHSSQSPDGKLLIIVGDN----------------PDGLLVDSMTGKTIASLCG--HL- 347 (475)
Q Consensus 309 ----------------------~~~~~sp~g~~l~~~~~d----------------g~i~iwd~~~~~~~~~l~~--h~- 347 (475)
..+++.+...++.++..+ +.|..+|..+|+.+..++. |.
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~ 295 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE 295 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc
Confidence 124566766667666532 2599999999999887763 21
Q ss_pred -------CCeEEEEEecCCC---EEEEEeCCCeEEEEECCCCCceEEEEecCC-------------Cce-----------
Q 011924 348 -------DFSFASAWHPNGV---TFATGNQDKTCRIWDLRNLSESVAVLKGNL-------------GAI----------- 393 (475)
Q Consensus 348 -------~~v~~~~~sp~g~---~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~-------------~~v----------- 393 (475)
.++. +...++|+ .++.++.+|.+.++|..+ ++.+-...... .++
T Consensus 296 ~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~ 373 (571)
T 2ad6_A 296 WDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNREN-GNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDH 373 (571)
T ss_dssp SCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTT-CCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTC
T ss_pred cccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCC-CCEEeeecccCCccccccccccCCceecccccCCCCCC
Confidence 1221 22334774 677888999999999977 66555443211 011
Q ss_pred ---------------EEEEEccCCCEEEEEc-------------------------------------CCCeEEEEECCC
Q 011924 394 ---------------RSIRYTSDGRYMATAE-------------------------------------PADFVHVYDVKS 421 (475)
Q Consensus 394 ---------------~~l~~spdg~~la~~~-------------------------------------~dg~i~iwd~~~ 421 (475)
..++++|+...|++.. .++.|..||+.+
T Consensus 374 ~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t 453 (571)
T 2ad6_A 374 KGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT 453 (571)
T ss_dssp CEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT
T ss_pred CceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC
Confidence 2467888877766653 347899999999
Q ss_pred CeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 422 GYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 422 ~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
++.+-++... ..+.+..+...+..+++++.|+.
T Consensus 454 G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~ 486 (571)
T 2ad6_A 454 GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGY 486 (571)
T ss_dssp CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSE
T ss_pred CCEEEEecCC-CCccceeEEECCCEEEEEcCCCe
Confidence 9877665432 22222223334556776665543
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.44 E-value=0.00033 Score=67.12 Aligned_cols=214 Identities=10% Similarity=-0.022 Sum_probs=129.2
Q ss_pred cEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-cccc
Q 011924 200 KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWP 278 (475)
Q Consensus 200 ~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~ 278 (475)
.+|+.+. ...|+..++...... ..... ......++| ++.+..++++-...+.|..+++........+. ....
T Consensus 45 ~~ll~~~-~~~I~~i~~~g~~~~---~~~~~-~~~~~~l~~--d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~ 117 (349)
T 3v64_C 45 PVLLFAN-RIDIRQVLPHRSEYT---LLLNN-LENAIALDF--HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES 117 (349)
T ss_dssp CEEEEEC-BSCEEEECTTSCCEE---EEECS-CSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred ceeEeec-ccceEEEeCCCCeeE---EeecC-CCceEEEEE--eccccEEEEEeccCCceEEEecCCCCceEEEeCCCCC
Confidence 3444443 345777776544322 22222 233577888 77666667777778899999987654332222 1122
Q ss_pred EEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCC-cEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEec
Q 011924 279 VNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDG-KLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHP 357 (475)
Q Consensus 279 v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp 357 (475)
.. .+++.+.+ ++.++-...+.|.+.++........+.........++++|
T Consensus 118 p~-----------------------------glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp 168 (349)
T 3v64_C 118 PG-----------------------------GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHP 168 (349)
T ss_dssp CC-----------------------------EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEET
T ss_pred cc-----------------------------EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEec
Confidence 23 78898854 4445555677899999864443333444446789999999
Q ss_pred CCCEEEEE-eCC-CeEEEEECCCCCceEEEE-ecCCCceEEEEEccCCCEEEEE-cCCCeEEEEECCCCeeEEEEeccCC
Q 011924 358 NGVTFATG-NQD-KTCRIWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVKSGYEKEQEIDFFG 433 (475)
Q Consensus 358 ~g~~l~t~-s~d-g~v~iwd~~~~~~~~~~~-~~~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~~~~~~~~~~~~~~~ 433 (475)
.+..|+.. ... +.|..+++.. .....+ .........++++|++..|+.+ ...+.|..+|+........+.....
T Consensus 169 ~~g~ly~td~~~~~~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~ 246 (349)
T 3v64_C 169 MEGTIYWTDWGNTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLP 246 (349)
T ss_dssp TTTEEEEEECSSSCEEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred CcCeEEEeccCCCCEEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCC
Confidence 65555544 344 7888888853 333333 2233457899999877666655 4567899999865433323333345
Q ss_pred CeEEEEEcCCCCeEEEEEec
Q 011924 434 EISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 434 ~i~~l~fspdg~~l~~~~~D 453 (475)
...++++. +..|+.+.+.
T Consensus 247 ~P~giav~--~~~ly~td~~ 264 (349)
T 3v64_C 247 HPFAITVF--EDSLYWTDWH 264 (349)
T ss_dssp SEEEEEEE--TTEEEEEETT
T ss_pred CceEEEEE--CCEEEEecCC
Confidence 67888883 3466666543
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.44 E-value=0.00049 Score=70.73 Aligned_cols=239 Identities=10% Similarity=-0.010 Sum_probs=141.5
Q ss_pred EEEEecCceEEEEeCCCCCceEEEeeecCC-C-CceeEEEEEeCCCCCeEEEEEe------CCCeEEEEECCCCeeeeee
Q 011924 202 LVAGGFQGELICKHLDRPGVSFCSRTTYDD-N-AITNAVEIYGSPSGAVHFTASN------NDCGVRDFDMGKYQLSKHF 273 (475)
Q Consensus 202 lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~-~-~~v~~l~~~~s~~g~~~l~s~s------~dg~v~iwd~~~~~~~~~~ 273 (475)
|++++.+|.|..+|..+.+........... . .......+ . ++ . +++++ .++.|+.+|..+++.+-.+
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v--~-~g-~-V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV--V-KD-K-VIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--E-TT-E-EEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE--E-CC-E-EEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence 788888999999999887766543332100 0 11111122 1 34 3 44443 3799999999999988766
Q ss_pred eccccE------------------------------------------EeccCCceE----------------------E
Q 011924 274 RFPWPV------------------------------------------NVSSSYCII----------------------L 289 (475)
Q Consensus 274 ~~~~~v------------------------------------------~~s~~~~~l----------------------~ 289 (475)
....+. .+.+....+ .
T Consensus 199 ~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~ 278 (599)
T 1w6s_A 199 YATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTM 278 (599)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSS
T ss_pred cCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccc
Confidence 532111 111111111 1
Q ss_pred EEEEeecccceEEEEeeeee----------e-EEEC---CCC---cEEEEEeCCCcEEEEECCCCceEEEeecCC-----
Q 011924 290 LCRLLNFMTEKVIICLLCLQ----------H-SSQS---PDG---KLLIIVGDNPDGLLVDSMTGKTIASLCGHL----- 347 (475)
Q Consensus 290 ~~~v~d~~~~~~~~~~~~i~----------~-~~~s---p~g---~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~----- 347 (475)
.+..+|..+|+......... . +.+. .+| +.++.++.+|.++++|..+|+.+.......
T Consensus 279 sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~ 358 (599)
T 1w6s_A 279 TIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVF 358 (599)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred eEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccc
Confidence 45667778887776544211 1 1122 467 567778899999999999999887654211
Q ss_pred --------CCe--------------------------EEEEEecCCCEEEEEe---------------------------
Q 011924 348 --------DFS--------------------------FASAWHPNGVTFATGN--------------------------- 366 (475)
Q Consensus 348 --------~~v--------------------------~~~~~sp~g~~l~t~s--------------------------- 366 (475)
.++ ..++++|+..++++..
T Consensus 359 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (599)
T 1w6s_A 359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (599)
T ss_dssp EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred cccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccccee
Confidence 011 1356777766665532
Q ss_pred ------------CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEeccCCC
Q 011924 367 ------------QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGE 434 (475)
Q Consensus 367 ------------~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 434 (475)
..|.|.-||+.+ ++.+-...... ++..-.+...|.+++.++.|+.|+.||.++|+.+-++....+.
T Consensus 439 ~~~p~~~~~~~~~~G~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~ 516 (599)
T 1w6s_A 439 YPGPKGDRQNYEGLGQIKAYNAIT-GDYKWEKMERF-AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGA 516 (599)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTT-CCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred ccCCcCCcccCCCcCeEEEEECCC-CCEEeEecCCC-CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCc
Confidence 346788888876 55444433211 1111112234667778999999999999999998887643322
Q ss_pred -eEEEEEcCCCCeE
Q 011924 435 -ISGISFSPDTESL 447 (475)
Q Consensus 435 -i~~l~fspdg~~l 447 (475)
..-+.+..+|+..
T Consensus 517 ~~~P~~y~~~G~qy 530 (599)
T 1w6s_A 517 IGYPMTYTHKGTQY 530 (599)
T ss_dssp CSCCEEEEETTEEE
T ss_pred EeccEEEEeCCEEE
Confidence 2335566788643
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.43 E-value=2.2e-05 Score=82.24 Aligned_cols=251 Identities=9% Similarity=-0.048 Sum_probs=141.1
Q ss_pred cCcEEEEEecCc-----------eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEe-CCCeEEEEECC
Q 011924 198 KDKLLVAGGFQG-----------ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN-NDCGVRDFDMG 265 (475)
Q Consensus 198 ~~~~lvsg~~dg-----------~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s-~dg~v~iwd~~ 265 (475)
++++++.||.++ .+.+||+.+............+.....++++ ..+|+. ++.|+ .+..+.+||..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~--~~~g~l-yv~GG~~~~~v~~yd~~ 273 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM--DGNGQI-VVTGGNDAKKTSLYDSS 273 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE--CTTSCE-EEECSSSTTCEEEEEGG
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccC--CCCCCE-EEeCCCCCCceEEecCc
Confidence 788888887543 6888998876644322222223333344555 678875 66665 45689999988
Q ss_pred CCeeeeeee--cc---ccEEeccCCceE------------EEEEEeecccceEEEEe----eee----eeEEECCCCcEE
Q 011924 266 KYQLSKHFR--FP---WPVNVSSSYCII------------LLCRLLNFMTEKVIICL----LCL----QHSSQSPDGKLL 320 (475)
Q Consensus 266 ~~~~~~~~~--~~---~~v~~s~~~~~l------------~~~~v~d~~~~~~~~~~----~~i----~~~~~sp~g~~l 320 (475)
+.+....-. .+ ..+.+.+++.+. ..+.+||+.+++..... ..+ ....+..++..+
T Consensus 274 t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iy 353 (656)
T 1k3i_A 274 SDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAW 353 (656)
T ss_dssp GTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCC
T ss_pred CCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceE
Confidence 765433211 11 112222233333 24678888877654321 000 011123455666
Q ss_pred EEEeCCC---------cEEEEECCCCceEEEeecCC---------CCeEEEEEec-CCCEEEEEeCCC-----------e
Q 011924 321 IIVGDNP---------DGLLVDSMTGKTIASLCGHL---------DFSFASAWHP-NGVTFATGNQDK-----------T 370 (475)
Q Consensus 321 ~~~~~dg---------~i~iwd~~~~~~~~~l~~h~---------~~v~~~~~sp-~g~~l~t~s~dg-----------~ 370 (475)
+.++.++ .+..||..+.........+. ....++.+.. ++++++.|+.++ .
T Consensus 354 v~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~ 433 (656)
T 1k3i_A 354 LFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHI 433 (656)
T ss_dssp EEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEE
T ss_pred EEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceE
Confidence 6665443 45678877665433332221 1234455544 778888887542 6
Q ss_pred EEEEECCCCCceEEEE--ecCCCc-eEEEEEccCCCEEEEEcCC-----------CeEEEEECCCCeeEEEE--eccCCC
Q 011924 371 CRIWDLRNLSESVAVL--KGNLGA-IRSIRYTSDGRYMATAEPA-----------DFVHVYDVKSGYEKEQE--IDFFGE 434 (475)
Q Consensus 371 v~iwd~~~~~~~~~~~--~~~~~~-v~~l~~spdg~~la~~~~d-----------g~i~iwd~~~~~~~~~~--~~~~~~ 434 (475)
|.+||... ..-.... ..+... -.+++..|+|+++++|+.+ ..+.+||..+.+-...- ......
T Consensus 434 v~~yd~~~-~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~ 512 (656)
T 1k3i_A 434 ITLGEPGT-SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVY 512 (656)
T ss_dssp EECCSTTS-CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCT
T ss_pred EEcCCCCC-CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCcccc
Confidence 78888764 3322222 111111 2345667899999998854 46899999876533211 111223
Q ss_pred eEEEEEcCCCCeEEEEEe
Q 011924 435 ISGISFSPDTESLFIGVW 452 (475)
Q Consensus 435 i~~l~fspdg~~l~~~~~ 452 (475)
.....+.|+|+.+++|+.
T Consensus 513 hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 513 HSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TEEEEECTTSCEEEEECC
T ss_pred ccHhhcCCCcEEEecCCC
Confidence 345667899999998875
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00036 Score=68.85 Aligned_cols=223 Identities=13% Similarity=0.100 Sum_probs=127.9
Q ss_pred EEEEEc---CcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCC----eEEEEECC
Q 011924 193 STLAVK---DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC----GVRDFDMG 265 (475)
Q Consensus 193 ~~l~~~---~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg----~v~iwd~~ 265 (475)
..|+++ ++.|+++...+.|+.+++...... .+. ........|++ +++|+.++++....+ .+..++.
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~---~~~-~~~~~P~~ia~--d~~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS---TVY-SGLSKVRTICW--THEADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE---EEE-CCCSCEEEEEE--CTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE---EEe-cCCCCcceEEE--eCCCCEEEEEeCCCCcccceEEEEeC-
Confidence 344553 455666555588888888754433 222 23345678888 999986566654332 2333332
Q ss_pred CCeee--eeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECCCCceEEE
Q 011924 266 KYQLS--KHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIAS 342 (475)
Q Consensus 266 ~~~~~--~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~ 342 (475)
.+... ..+....... .++++| +|.++++-...+.|..++...+.....
T Consensus 213 ~g~~~~~~~l~~~~~p~-----------------------------giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 213 ESGFKVITELTKGQNCN-----------------------------GAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp GGTSCSEEEEEECSSCC-----------------------------CEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCceeeeeeeccCCCce-----------------------------EEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 22221 1121111122 788999 777777666778999999876654222
Q ss_pred ee-cCCCCeEEEEEecCCCEEEEE-eCCCeEEEEECCCC-Cce--EEEEecC---------------CCceE-EEEEc--
Q 011924 343 LC-GHLDFSFASAWHPNGVTFATG-NQDKTCRIWDLRNL-SES--VAVLKGN---------------LGAIR-SIRYT-- 399 (475)
Q Consensus 343 l~-~h~~~v~~~~~sp~g~~l~t~-s~dg~v~iwd~~~~-~~~--~~~~~~~---------------~~~v~-~l~~s-- 399 (475)
.. +.......++|+|+|++|+.+ ...+.|..++.... +.. +..+.+. -.... .++..
T Consensus 264 ~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~ 343 (430)
T 3tc9_A 264 FTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNP 343 (430)
T ss_dssp EECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECG
T ss_pred EEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccc
Confidence 22 122457889999999955554 45788999887531 111 2222221 01123 45553
Q ss_pred ------cCCCEEEEEcCCCeEEEEECCCCeeEEEEecc------------------CCCeEEEEEcCCCCeEEEEEec
Q 011924 400 ------SDGRYMATAEPADFVHVYDVKSGYEKEQEIDF------------------FGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 400 ------pdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~i~~l~fspdg~~l~~~~~D 453 (475)
++|.+.++=...+.|+.++ .+|... .+.+. .....+|+++|++..|+++-..
T Consensus 344 ~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 419 (430)
T 3tc9_A 344 AYKGSSDEYDFYFCDRENHCIRILT-PQGRVT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRE 419 (430)
T ss_dssp GGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred cccccCCCCeEEEEECCCcEEEEEC-CCCcEE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECC
Confidence 4466666666678899999 556433 33221 1258899999965566666443
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.38 E-value=0.00049 Score=66.88 Aligned_cols=215 Identities=10% Similarity=-0.025 Sum_probs=130.4
Q ss_pred cEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee-cccc
Q 011924 200 KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWP 278 (475)
Q Consensus 200 ~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~ 278 (475)
.+|+.+. ...|+..++...... .+.. .......++| .+.+..++++-...+.|..+++........+. ....
T Consensus 88 ~~l~~~~-~~~I~~i~~~~~~~~---~~~~-~~~~~~gl~~--d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~ 160 (386)
T 3v65_B 88 PVLLFAN-RIDIRQVLPHRSEYT---LLLN-NLENAIALDF--HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES 160 (386)
T ss_dssp CEEEEEC-BSCEEEECTTSCCCE---EEEC-SCSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSC
T ss_pred ceeEeec-CccceeeccCCCcEE---EEec-CCCccEEEEE--ecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCC
Confidence 3444443 456777787654433 2222 2234567888 77666667777778899999987654333222 1112
Q ss_pred EEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCc-EEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEec
Q 011924 279 VNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGK-LLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHP 357 (475)
Q Consensus 279 v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp 357 (475)
.. .+++.+.+. +.++-...+.|.+.++........+.........++++|
T Consensus 161 p~-----------------------------glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp 211 (386)
T 3v65_B 161 PG-----------------------------GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHP 211 (386)
T ss_dssp CC-----------------------------CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEET
T ss_pred cc-----------------------------EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEc
Confidence 23 778888544 445555567888888764443333444446789999999
Q ss_pred CCCEEEEEeC-C-CeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEE-cCCCeEEEEECCCCeeEEEEeccCCC
Q 011924 358 NGVTFATGNQ-D-KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVKSGYEKEQEIDFFGE 434 (475)
Q Consensus 358 ~g~~l~t~s~-d-g~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~~~~~~~~~~~~~~~~ 434 (475)
.+..|+.+.. . +.|..+++.. ................|+|+|++..|+.+ +..+.|..+|+........+......
T Consensus 212 ~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~ 290 (386)
T 3v65_B 212 MEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPH 290 (386)
T ss_dssp TTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSS
T ss_pred CCCeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCC
Confidence 6665555543 4 6788888853 22222333334457899999877666555 45678999997644333333333456
Q ss_pred eEEEEEcCCCCeEEEEEec
Q 011924 435 ISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 435 i~~l~fspdg~~l~~~~~D 453 (475)
..+|++. +..|+.+.+.
T Consensus 291 P~giav~--~~~ly~td~~ 307 (386)
T 3v65_B 291 PFAITVF--EDSLYWTDWH 307 (386)
T ss_dssp EEEEEEE--TTEEEEEETT
T ss_pred ceEEEEE--CCEEEEeeCC
Confidence 7888883 3466665543
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.33 E-value=0.0022 Score=60.35 Aligned_cols=211 Identities=9% Similarity=-0.064 Sum_probs=126.7
Q ss_pred EEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC---eeeee-ee-cc
Q 011924 202 LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY---QLSKH-FR-FP 276 (475)
Q Consensus 202 lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~---~~~~~-~~-~~ 276 (475)
|+.+. ...|+..++....... +.. ......+++| ++.+..++++-...+.|..+++... ..... +. ..
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~---~~~-~~~~p~g~~~--d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTS---LIP-NLRNVVALDT--EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEE---EEC-SCSSEEEEEE--ETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred EEEEC-CCeEEEEECCCcceEe---hhc-CCCceEEEEE--EeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC
Confidence 44443 3568888887655432 222 2234567777 8776666777777889999998751 21111 11 11
Q ss_pred ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCC-cEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEE
Q 011924 277 WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDG-KLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAW 355 (475)
Q Consensus 277 ~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~ 355 (475)
.... .+++++.+ ++.++-...+.|.++++........+.........+++
T Consensus 77 ~~p~-----------------------------glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iav 127 (316)
T 1ijq_A 77 QAPD-----------------------------GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVV 127 (316)
T ss_dssp SCCC-----------------------------EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEE
T ss_pred CCcC-----------------------------EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEe
Confidence 1223 78888744 44455566788999998644333333334457889999
Q ss_pred ecCCCEEEEEeCC--CeEEEEECCCCCceEEEE-ecCCCceEEEEEccCCCEEEEEc-CCCeEEEEECCCCeeEEEEec-
Q 011924 356 HPNGVTFATGNQD--KTCRIWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEID- 430 (475)
Q Consensus 356 sp~g~~l~t~s~d--g~v~iwd~~~~~~~~~~~-~~~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~~~~~~~~~~~~- 430 (475)
+|.+..|+.+... +.|...++. +.....+ .........++++|++..|+.+. ..+.|..+|+... ....+..
T Consensus 128 dp~~g~ly~~d~~~~~~I~~~~~d--G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~ 204 (316)
T 1ijq_A 128 DPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILED 204 (316)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETT--SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEEC
T ss_pred CCCCCEEEEEccCCCCeEEEEcCC--CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeec
Confidence 9966655555442 688888885 3333333 23345678999999876666554 5679999998643 3333322
Q ss_pred --cCCCeEEEEEcCCCCeEEEEEec
Q 011924 431 --FFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 431 --~~~~i~~l~fspdg~~l~~~~~D 453 (475)
......++++. +..|+.+-+.
T Consensus 205 ~~~~~~P~giav~--~~~ly~~d~~ 227 (316)
T 1ijq_A 205 EKRLAHPFSLAVF--EDKVFWTDII 227 (316)
T ss_dssp TTTTSSEEEEEEE--TTEEEEEETT
T ss_pred CCccCCcEEEEEE--CCEEEEEECC
Confidence 23457788885 3466665543
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.32 E-value=0.00072 Score=61.27 Aligned_cols=198 Identities=7% Similarity=0.042 Sum_probs=118.8
Q ss_pred eEEEEEE--cCc-EEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCC
Q 011924 191 QVSTLAV--KDK-LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (475)
Q Consensus 191 ~v~~l~~--~~~-~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~ 267 (475)
.++.|++ +++ ++++...++.|...++. ..... ..........-.|++ .+++.+ +++.-.++.+.++++...
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~--~i~l~g~~D~EGIa~--~~~g~~-~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIR--TIPLDFVKDLETIEY--IGDNQF-VISDERDYAIYVISLTPN 101 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEE--EEECSSCSSEEEEEE--CSTTEE-EEEETTTTEEEEEEECTT
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEE--EEecCCCCChHHeEE--eCCCEE-EEEECCCCcEEEEEcCCC
Confidence 5888888 344 55557778889888887 44332 222222345677888 777753 566556788999987654
Q ss_pred eee---eeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECC---CCceEE
Q 011924 268 QLS---KHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSM---TGKTIA 341 (475)
Q Consensus 268 ~~~---~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~---~~~~~~ 341 (475)
..+ .....+.... .. ...+..++|+|.++.|.++.......||... .+..+.
T Consensus 102 ~~i~~~~~~~~~~~~~-~~---------------------N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 102 SEVKILKKIKIPLQES-PT---------------------NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH 159 (255)
T ss_dssp CCEEEEEEEECCCSSC-CC---------------------SSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE
T ss_pred Ceeeeeeeeccccccc-cc---------------------cCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee
Confidence 321 2221110000 00 0012289999988777776655444444443 122223
Q ss_pred Eee-------cCCCCeEEEEEec-CCCEEEEEeCCCeEEEEECCCCCceEEEEecCC---------CceEEEEEccCCCE
Q 011924 342 SLC-------GHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL---------GAIRSIRYTSDGRY 404 (475)
Q Consensus 342 ~l~-------~h~~~v~~~~~sp-~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~---------~~v~~l~~spdg~~ 404 (475)
.+. .+...+.+++++| .+++++.+...+.+.++|.. ++.+..+.-.. ...-.|+|.|+|+.
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~--g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~l 237 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV--GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNI 237 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT--CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCE
T ss_pred eecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC--CCEEEEEEcCCccCCcccccCCCCeeEECCCCCE
Confidence 221 1334578999999 56666677778899999985 45555554332 25679999999986
Q ss_pred EEEEcCCCeEEEEEC
Q 011924 405 MATAEPADFVHVYDV 419 (475)
Q Consensus 405 la~~~~dg~i~iwd~ 419 (475)
.+++ .-+.+++|.-
T Consensus 238 yIvs-E~n~~y~f~~ 251 (255)
T 3qqz_A 238 YIVS-EPNRFYRFTP 251 (255)
T ss_dssp EEEE-TTTEEEEEEC
T ss_pred EEEc-CCceEEEEEe
Confidence 6654 4457777764
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.30 E-value=0.002 Score=62.83 Aligned_cols=214 Identities=9% Similarity=-0.065 Sum_probs=129.6
Q ss_pred EEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe----eeeeee-c
Q 011924 201 LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ----LSKHFR-F 275 (475)
Q Consensus 201 ~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~----~~~~~~-~ 275 (475)
+|+.. ....|+..++....... +. .....+.+|+| ++.+..++++-...+.|+.+++.... ....+. .
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~---~~-~~~~~~~~l~~--d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTS---LI-PNLRNVVALDT--EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEE---EE-CSCSCEEEEEE--ETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred eeEEe-ccceeEEEccCCcceeE---ec-cccCcceEEee--eeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 44444 34678888887654432 22 23345677888 77666667776677889988886522 111111 2
Q ss_pred cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEE
Q 011924 276 PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASA 354 (475)
Q Consensus 276 ~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~ 354 (475)
..... .+++.+ .+++.++-...+.|.+.++........+.........++
T Consensus 158 ~~~p~-----------------------------glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~ia 208 (400)
T 3p5b_L 158 IQAPD-----------------------------GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIV 208 (400)
T ss_dssp CSCEE-----------------------------EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEE
T ss_pred CCCcc-----------------------------cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEE
Confidence 22334 788988 455555555678899999875544444444455688999
Q ss_pred EecCCCEEEEEeC--CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEEECCCCeeEEEEec-
Q 011924 355 WHPNGVTFATGNQ--DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEID- 430 (475)
Q Consensus 355 ~sp~g~~l~t~s~--dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~~~~~~~~~~~~- 430 (475)
++|.+.+|+.... .+.|...++.. ......+.........|+++|++..|+.+. ..+.|..+|+...........
T Consensus 209 vdp~~g~ly~td~~~~~~I~~~~~dG-~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~ 287 (400)
T 3p5b_L 209 VDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE 287 (400)
T ss_dssp EETTTTEEEEEECSSSCCEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECS
T ss_pred EecccCeEEEEeCCCCCEEEEEeCCC-CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCC
Confidence 9996666655543 36788888853 232333333345678999999877776664 467899999865433322222
Q ss_pred -cCCCeEEEEEcCCCCeEEEEEec
Q 011924 431 -FFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 431 -~~~~i~~l~fspdg~~l~~~~~D 453 (475)
......++++ ++..|+.+-+.
T Consensus 288 ~~l~~P~gl~v--~~~~lywtd~~ 309 (400)
T 3p5b_L 288 KRLAHPFSLAV--FEDKVFWTDII 309 (400)
T ss_dssp STTSSEEEEEE--ETTEEEEEESS
T ss_pred CCCCCCEEEEE--eCCEEEEecCC
Confidence 2345667777 34456655443
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.29 E-value=0.0029 Score=67.11 Aligned_cols=207 Identities=9% Similarity=-0.022 Sum_probs=123.3
Q ss_pred eEEEEEE---cCcEEEEEecCceEEEEeCCCCCc-eEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC
Q 011924 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGV-SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 191 ~v~~l~~---~~~~lvsg~~dg~i~vw~~~~~~~-~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
.+.+|++ .+.++++-...+.|+.+++..... .....+..........|++ .+.+..++++-...+.|.+.++..
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv--D~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV--DWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee--eecCCcEEEEecCCCeEEEEeCCC
Confidence 3556777 345556666778898888875321 0001222223344567888 777766778877888999999975
Q ss_pred Ceeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe-C-CCcEEEEECCCCceEEEe
Q 011924 267 YQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG-D-NPDGLLVDSMTGKTIASL 343 (475)
Q Consensus 267 ~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~-dg~i~iwd~~~~~~~~~l 343 (475)
......+. ...... .|+++|.+..|..+. . .+.|...++........+
T Consensus 503 ~~~~~l~~~~l~~P~-----------------------------gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 503 VKRKTLFRENGSKPR-----------------------------AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp SSEEEEEECTTCCEE-----------------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred CeEEEEEeCCCCCcc-----------------------------eEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 44322222 223345 889999755555553 2 367888887644333333
Q ss_pred ecCCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCCCceEEEEec--CCCceEEEEEccCCCEEEEEcCCCeEEEEECC
Q 011924 344 CGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSESVAVLKG--NLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420 (475)
Q Consensus 344 ~~h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~~~~~~~~~~--~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~ 420 (475)
.........|+++|.+..|+.+. ....|...++.. ......+.. ......+|++.. ++++++-...+.|...|..
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG-~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC-CceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCC
Confidence 43446789999998666666554 467899999854 333333332 122344666643 3344444556889999987
Q ss_pred CCeeEEEEec
Q 011924 421 SGYEKEQEID 430 (475)
Q Consensus 421 ~~~~~~~~~~ 430 (475)
+|..+..+..
T Consensus 632 tG~~~~~l~~ 641 (791)
T 3m0c_C 632 TGSDVNLLAE 641 (791)
T ss_dssp TCCCCEEEEC
T ss_pred CCcceEEeec
Confidence 8866655543
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=0.0025 Score=67.97 Aligned_cols=223 Identities=14% Similarity=0.075 Sum_probs=138.0
Q ss_pred ccceeEEEEEE-cCcEEEEEecCceEEEEeCCCCCceEEEee------ecCCCCceeEEEEEeCCCCCeEEEEEeCCCeE
Q 011924 187 FTQTQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRT------TYDDNAITNAVEIYGSPSGAVHFTASNNDCGV 259 (475)
Q Consensus 187 ~~~~~v~~l~~-~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~------~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v 259 (475)
+....|.++.. ....|-.|+.++-|..++............ ..-....|.++.. .++|. +..|+.++.|
T Consensus 310 l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~--d~~g~--lWigt~~~Gl 385 (781)
T 3v9f_A 310 LSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCD--DGQGK--LWIGTDGGGI 385 (781)
T ss_dssp BSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEE--CTTSC--EEEEEBSSCE
T ss_pred CCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEE--cCCCC--EEEEeCCCcE
Confidence 34457889988 445677788788888888765443211100 0112345777777 77775 5566666779
Q ss_pred EEEECCCCeeeeeee----ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECC
Q 011924 260 RDFDMGKYQLSKHFR----FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSM 335 (475)
Q Consensus 260 ~iwd~~~~~~~~~~~----~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~ 335 (475)
..|+..+++...... ....|. ++...++|.+.+ |+..+-+..++..
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~v~-----------------------------~i~~d~~g~lWi-gt~~~Gl~~~~~~ 435 (781)
T 3v9f_A 386 NVFENGKRVAIYNKENRELLSNSVL-----------------------------CSLKDSEGNLWF-GTYLGNISYYNTR 435 (781)
T ss_dssp EEEETTEEEEECC-----CCCSBEE-----------------------------EEEECTTSCEEE-EETTEEEEEECSS
T ss_pred EEEECCCCeEEEccCCCCCCCcceE-----------------------------EEEECCCCCEEE-EeccCCEEEEcCC
Confidence 999986654322110 112344 788888887555 6665678999987
Q ss_pred CCceEEEee---cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecC-----CCceEEEEEccCCCEEEE
Q 011924 336 TGKTIASLC---GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN-----LGAIRSIRYTSDGRYMAT 407 (475)
Q Consensus 336 ~~~~~~~l~---~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~-----~~~v~~l~~spdg~~la~ 407 (475)
+++.. .+. .....|.++...++|++.+ |+. +-|..||..+ ++........ ...|.++...++|++.+.
T Consensus 436 ~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 436 LKKFQ-IIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG 511 (781)
T ss_dssp SCEEE-ECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE
T ss_pred CCcEE-EeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCEEEE
Confidence 77543 332 1346789998888876544 445 4588899865 3332222211 357899999999986655
Q ss_pred EcCCCeEEEEECCCCeeEEEEec----cCCCeEEEEEcCCCCeEEE
Q 011924 408 AEPADFVHVYDVKSGYEKEQEID----FFGEISGISFSPDTESLFI 449 (475)
Q Consensus 408 ~~~dg~i~iwd~~~~~~~~~~~~----~~~~i~~l~fspdg~~l~~ 449 (475)
....| |..||..++.. ..+.. ....|.++...++|...++
T Consensus 512 t~~~G-l~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 512 TFGGG-VGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp ESSSC-EEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred EcCCC-EEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 44355 88899776543 23321 1346889999888875543
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=0.0013 Score=70.25 Aligned_cols=263 Identities=12% Similarity=0.045 Sum_probs=150.9
Q ss_pred ecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE-cCcEEEEEecCceEEEEeCC
Q 011924 139 ATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-KDKLLVAGGFQGELICKHLD 217 (475)
Q Consensus 139 ~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~lvsg~~dg~i~vw~~~ 217 (475)
......|++.....+..++..+++........+ . ........|.++.. ....|..|+..+.|.+++..
T Consensus 218 ~d~~g~lwigt~~Gl~~~d~~~~~~~~~~~~~~-------~----~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 218 KDTNGNIWIGTSKGLALFNANTETFTNFHNNPG-------N----IHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQ 286 (781)
T ss_dssp ECTTCCEEEEETTEEEEEETTTTEEEC----------------------CCCCEEEEEECTTSEEEEEESSSCEEEEETT
T ss_pred EcCCCCEEEEeCCcHheECCCCCcEEEEEcCCC-------c----cccccCceEEEEEECCCCCEEEEeCCCCeEEECCC
Confidence 334445555554577777765543322110000 0 01123346888888 55667778775678888876
Q ss_pred CCCceEEEe-------ee----cCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee----------cc
Q 011924 218 RPGVSFCSR-------TT----YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR----------FP 276 (475)
Q Consensus 218 ~~~~~~~~~-------~~----~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~----------~~ 276 (475)
......... .. .-....|.++.. .++|. +-.|+.++.|..++..+........ ..
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~--D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 362 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQ--DSFNN--IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSN 362 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEE--CSSCC--EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSS
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEE--eCCCC--EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCC
Confidence 544221111 00 112345777766 77775 5666677889999886543322110 11
Q ss_pred ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEe---ecCCCCeEEE
Q 011924 277 WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL---CGHLDFSFAS 353 (475)
Q Consensus 277 ~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l---~~h~~~v~~~ 353 (475)
..|. ++...++|.+. +|+.++-|..++..+++..... ......|.++
T Consensus 363 ~~v~-----------------------------~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 363 KVVS-----------------------------SVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp SCEE-----------------------------EEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred cceE-----------------------------EEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 2344 88888887755 5565566899997654322111 1234678999
Q ss_pred EEecCCCEEEEEeCCCeEEEEECCCCCceEEEEec---CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEec
Q 011924 354 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 430 (475)
Q Consensus 354 ~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~ 430 (475)
...++|++.+ |+.++-+..+|..+ ++ ...+.. ....|.++...++|++.+. +. +-|..||..++........
T Consensus 413 ~~d~~g~lWi-gt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~ 487 (781)
T 3v9f_A 413 LKDSEGNLWF-GTYLGNISYYNTRL-KK-FQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDT 487 (781)
T ss_dssp EECTTSCEEE-EETTEEEEEECSSS-CE-EEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECT
T ss_pred EECCCCCEEE-EeccCCEEEEcCCC-Cc-EEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccC
Confidence 8888877554 66666788898864 33 333321 3457899999888875554 44 4599999877644332221
Q ss_pred c-----CCCeEEEEEcCCCCeEEEEEe
Q 011924 431 F-----FGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 431 ~-----~~~i~~l~fspdg~~l~~~~~ 452 (475)
. ...|.++...++|... +|+.
T Consensus 488 ~~~~~~~~~i~~i~~d~~g~lW-igt~ 513 (781)
T 3v9f_A 488 SNSQLLENFVRSIAQDSEGRFW-IGTF 513 (781)
T ss_dssp TTSSCSCSCEEEEEECTTCCEE-EEES
T ss_pred cccccccceeEEEEEcCCCCEE-EEEc
Confidence 1 3578999999988654 4444
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.25 E-value=0.0014 Score=61.80 Aligned_cols=207 Identities=8% Similarity=-0.039 Sum_probs=124.4
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeee-eee-ccccEEeccCC
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSK-HFR-FPWPVNVSSSY 285 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~-~~~-~~~~v~~s~~~ 285 (475)
...|+..+++.......... .. .....+++| .+.+..++.+-...+.|..+++....... .+. ......
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~-~~-~~~~~~ld~--d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~----- 82 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVV-GG-LEDAAAVDF--VFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD----- 82 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEE-EE-EEEEEEEEE--EGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC-----
T ss_pred cCeEEEEECCCCceEEEEEe-cC-CCccEEEEE--EeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc-----
Confidence 46788888876542211111 11 123456667 77666667777778889999987653211 111 112223
Q ss_pred ceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEE
Q 011924 286 CIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT 364 (475)
Q Consensus 286 ~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t 364 (475)
.+++.+ .++++++-...+.|.++++........+.........++++|.+..|+.
T Consensus 83 ------------------------glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~ 138 (318)
T 3sov_A 83 ------------------------GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYW 138 (318)
T ss_dssp ------------------------EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEE
T ss_pred ------------------------EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEE
Confidence 788887 4555555556778999998644333333344567889999996666665
Q ss_pred EeC--CCeEEEEECCCCCceEEEE-ecCCCceEEEEEccCCCEEEEE-cCCCeEEEEECCCCeeEEEEeccCCCeEEEEE
Q 011924 365 GNQ--DKTCRIWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVKSGYEKEQEIDFFGEISGISF 440 (475)
Q Consensus 365 ~s~--dg~v~iwd~~~~~~~~~~~-~~~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~f 440 (475)
+.. .+.|...++.. .....+ .........++++|++..|+.+ +..+.|..+|+.................++++
T Consensus 139 td~~~~~~I~r~~~dG--~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav 216 (318)
T 3sov_A 139 TDWGEVPKIERAGMDG--SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL 216 (318)
T ss_dssp EECSSSCEEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEE
T ss_pred EecCCCCEEEEEEcCC--CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEE
Confidence 553 57888888853 323333 3334466899999977666655 45688999998643322222223456778887
Q ss_pred cCCCCeEEEEE
Q 011924 441 SPDTESLFIGV 451 (475)
Q Consensus 441 spdg~~l~~~~ 451 (475)
.. ..|+.+-
T Consensus 217 ~~--~~lywtd 225 (318)
T 3sov_A 217 FE--DILYWTD 225 (318)
T ss_dssp ET--TEEEEEE
T ss_pred eC--CEEEEEe
Confidence 53 3555553
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.22 E-value=0.00059 Score=67.35 Aligned_cols=222 Identities=13% Similarity=0.072 Sum_probs=127.7
Q ss_pred EEEEEc----CcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC---Ce-EEEEEC
Q 011924 193 STLAVK----DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND---CG-VRDFDM 264 (475)
Q Consensus 193 ~~l~~~----~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d---g~-v~iwd~ 264 (475)
..|+++ +..|+.+...+.|+.+++...... .. .........|++ +++|+ ++++.... .. +...+.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~---~~-~~~~~~P~giav--d~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD---IK-TTNIGQCADVNF--TLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE---EE-CCCCSCEEEEEE--CTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE---Ee-ecCCCCccEEEE--CCCCC-EEEEcCCCCcccceEEEEEC
Confidence 466774 345555544488988887644332 22 223345678888 99998 56665322 11 222222
Q ss_pred CCCee-eeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC-CCcEEEEEeCCCcEEEEECCCCceEEE
Q 011924 265 GKYQL-SKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIAS 342 (475)
Q Consensus 265 ~~~~~-~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~ 342 (475)
..+.. ...+....... .++++| +|.+.++-..++.|+.++..++.....
T Consensus 215 ~~~~~~~~~~~~~~~P~-----------------------------giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~ 265 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAK-----------------------------TCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEE 265 (433)
T ss_dssp GGTTCCEEEEEECSSBC-----------------------------CCEECTTTCCEEECBTTCSEEEEECTTTCCEEEE
T ss_pred CCCeeccccccccCCCC-----------------------------EEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEE
Confidence 11100 01111111112 778999 777666666778899999887776333
Q ss_pred e-e-cCCCCeEEEEEecCCCEEEEE-eCCCeEEEEECCCC-Cc--eEEEEecC---------------CCceEEEEE---
Q 011924 343 L-C-GHLDFSFASAWHPNGVTFATG-NQDKTCRIWDLRNL-SE--SVAVLKGN---------------LGAIRSIRY--- 398 (475)
Q Consensus 343 l-~-~h~~~v~~~~~sp~g~~l~t~-s~dg~v~iwd~~~~-~~--~~~~~~~~---------------~~~v~~l~~--- 398 (475)
+ . +.......++|+|++++|+.+ ...+.|+.++.... +. ....+.+. -.....+++
T Consensus 266 ~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n 345 (433)
T 4hw6_A 266 EVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKN 345 (433)
T ss_dssp EEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEEC
T ss_pred EeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcc
Confidence 3 2 122334579999999955555 45678999886421 11 11222221 123567999
Q ss_pred ------ccCCCEEEEEcCCCeEEEEECCCCeeEEEEecc------------------CCCeEEEEEcCCCCeEEEEEe
Q 011924 399 ------TSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF------------------FGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 399 ------spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~i~~l~fspdg~~l~~~~~ 452 (475)
.++|++.++-...+.|+.++. +|.. ..+.+. .....+|+++|....|+++-.
T Consensus 346 ~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 346 EAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp GGGTTSSCCEEEEEEETTTTEEEEECT-TSEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred ccccccCCCCcEEEEECCCCEEEEECC-CCCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 778877777777889999984 6643 333321 234789999954445555543
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.20 E-value=0.00066 Score=63.97 Aligned_cols=190 Identities=13% Similarity=0.196 Sum_probs=122.3
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECC----CCcE--EEE
Q 011924 249 HFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSP----DGKL--LII 322 (475)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp----~g~~--l~~ 322 (475)
+++.....+.+.+||+ .++.+..+.. ..++ .+.+-| .|+. ++.
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~n-----------------------------nVD~r~~~~l~g~~~dla~ 90 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT-GKLN-----------------------------NVDIRYDFPLNGKKVDIAA 90 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC-SCEE-----------------------------EEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC-CCcc-----------------------------cEEEecccccCCceEeEEE
Confidence 4666668889999999 7888777754 4455 555444 2322 333
Q ss_pred E-e-C--CCcEEEEECC--CCceEEEeec------CC-CCeEEEEE--ecC-CC-EEEEEeCCCeEEEEECCC------C
Q 011924 323 V-G-D--NPDGLLVDSM--TGKTIASLCG------HL-DFSFASAW--HPN-GV-TFATGNQDKTCRIWDLRN------L 379 (475)
Q Consensus 323 ~-~-~--dg~i~iwd~~--~~~~~~~l~~------h~-~~v~~~~~--sp~-g~-~l~t~s~dg~v~iwd~~~------~ 379 (475)
+ . . +..|.+|++. ++ .+..+.. .. ..+..+|+ +|. +. ++++...+|.+..|++.. .
T Consensus 91 as~R~~~~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~ 169 (355)
T 3amr_A 91 ASNRSEGKNTIEIYAIDGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYIS 169 (355)
T ss_dssp EEECSTTCCEEEEEEECTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEE
T ss_pred EeCCCCCCCeEEEEEECCCCC-ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCccc
Confidence 3 3 3 5789999763 44 3555521 11 45667777 774 44 677788889999998842 1
Q ss_pred CceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECC-----CCeeEEEEe-c-cCCCeEEEEE--cCCCC-eEEE
Q 011924 380 SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK-----SGYEKEQEI-D-FFGEISGISF--SPDTE-SLFI 449 (475)
Q Consensus 380 ~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~-----~~~~~~~~~-~-~~~~i~~l~f--spdg~-~l~~ 449 (475)
.+.++.+... +.+-.++..+....|+.+..+.-|..|+.. ++..+..+. + ....+.+|++ .++|+ +|++
T Consensus 170 ~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLiv 248 (355)
T 3amr_A 170 GKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMA 248 (355)
T ss_dssp EEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEE
T ss_pred ceEEEEecCC-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEE
Confidence 2456777654 478899999988899999988778888854 233443321 1 2247888888 56666 7887
Q ss_pred EEecCCcceEEEEEeecceeeecc
Q 011924 450 GVWDRTYGSLLEYGRCRNYSYLDS 473 (475)
Q Consensus 450 ~~~D~~~~~ll~~~~~~~~~~l~~ 473 (475)
++... ..+.-|.+...+.|+-+
T Consensus 249 SsQG~--~s~~Vydr~~~~~~vg~ 270 (355)
T 3amr_A 249 SSQGN--SSYAIYDRQGKNKYVAD 270 (355)
T ss_dssp EEGGG--TEEEEEESSTTCCEEEE
T ss_pred EcCCC--CEEEEEECCCCCcEEEE
Confidence 77433 34566666555666654
No 280
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.15 E-value=0.00054 Score=64.14 Aligned_cols=180 Identities=11% Similarity=0.057 Sum_probs=108.7
Q ss_pred ceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEE
Q 011924 234 ITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQ 313 (475)
Q Consensus 234 ~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~ 313 (475)
....++| +++|+ ++++....+.|..||... +....+....... ++++
T Consensus 33 ~pegia~--~~~g~-lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~-----------------------------gia~ 79 (306)
T 2p4o_A 33 FLENLAS--APDGT-IFVTNHEVGEIVSITPDG-NQQIHATVEGKVS-----------------------------GLAF 79 (306)
T ss_dssp CEEEEEE--CTTSC-EEEEETTTTEEEEECTTC-CEEEEEECSSEEE-----------------------------EEEE
T ss_pred CcceEEE--CCCCC-EEEEeCCCCeEEEECCCC-ceEEEEeCCCCce-----------------------------eEEE
Confidence 3466778 88887 467766788999998765 3333444444555 8999
Q ss_pred CCCCcEEEEEeCC--CcEEEEECCCCceEEEeec-CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCc-eEEEEe--
Q 011924 314 SPDGKLLIIVGDN--PDGLLVDSMTGKTIASLCG-HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE-SVAVLK-- 387 (475)
Q Consensus 314 sp~g~~l~~~~~d--g~i~iwd~~~~~~~~~l~~-h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~-~~~~~~-- 387 (475)
+++|+++++.... ..|..++..+++....... .......++..+++..+++-...+.|.++|... +. .+....
T Consensus 80 ~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~-~~~~v~~~~~~ 158 (306)
T 2p4o_A 80 TSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ-PSGSIWLEHPM 158 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT-TEEEEEEECGG
T ss_pred cCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC-CcEeEEEECCc
Confidence 9999976655433 2477778777775433221 222344555556555555555688899999754 21 121111
Q ss_pred -------cCCCceEEEEEccCCCEEEEE-cCCCeEEEEECCC-Cee--EEEEeccCCCeEEEEEcCCCCeEEEEE
Q 011924 388 -------GNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVKS-GYE--KEQEIDFFGEISGISFSPDTESLFIGV 451 (475)
Q Consensus 388 -------~~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~~~-~~~--~~~~~~~~~~i~~l~fspdg~~l~~~~ 451 (475)
........+ +|+|++|+.+ ...+.|..|++.. +.. ...+. ......+++++++|++ +++.
T Consensus 159 ~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l-~va~ 229 (306)
T 2p4o_A 159 LARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNL-YGAT 229 (306)
T ss_dssp GSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCE-EEEC
T ss_pred cccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCE-EEEe
Confidence 111234455 8888766555 4568999999874 321 11111 1245678999999965 4443
No 281
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.11 E-value=0.00035 Score=74.20 Aligned_cols=187 Identities=14% Similarity=0.110 Sum_probs=103.2
Q ss_pred EEE-EcCcEEEEEec-C----ceEEEEeCCCC-CceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC----CeEEEE
Q 011924 194 TLA-VKDKLLVAGGF-Q----GELICKHLDRP-GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRDF 262 (475)
Q Consensus 194 ~l~-~~~~~lvsg~~-d----g~i~vw~~~~~-~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d----g~v~iw 262 (475)
+++ .+|++|+.+.. . .+|+++++... .... ... ......+.| +|+|+.++++.... ..|.++
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~--~~~---~~~~~~~~W--spDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA--DKV---SGTNGEIVW--GPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC--CCE---EEECSCCEE--CSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC--ccc---cCceeeEEE--ecCCCEEEEEEECCCCCCCEEEEE
Confidence 455 57887775543 2 35999999876 4210 000 011345677 99998856655322 257777
Q ss_pred ECCCCeee--eeee--ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe---CCCcEEEEECC
Q 011924 263 DMGKYQLS--KHFR--FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG---DNPDGLLVDSM 335 (475)
Q Consensus 263 d~~~~~~~--~~~~--~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~---~dg~i~iwd~~ 335 (475)
++.+++.. ..+. ...... .+.|||||++|+..+ ....|+++|+.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~-----------------------------~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSA-----------------------------FMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEE-----------------------------EEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred ECCCCchhcEEEEecCCCceEE-----------------------------EEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 88665321 2222 112233 778999999988765 34468889988
Q ss_pred CCc-eE--EEee-cCCCCeEEEEEecCCCEEEEEeCC----CeEEEEECCCCCceEEE-EecCCC--ceEEEEEccCCCE
Q 011924 336 TGK-TI--ASLC-GHLDFSFASAWHPNGVTFATGNQD----KTCRIWDLRNLSESVAV-LKGNLG--AIRSIRYTSDGRY 404 (475)
Q Consensus 336 ~~~-~~--~~l~-~h~~~v~~~~~sp~g~~l~t~s~d----g~v~iwd~~~~~~~~~~-~~~~~~--~v~~l~~spdg~~ 404 (475)
++. .. ..+. ......+++.|+..+.+++....+ ..|..+|+.+. ..... +..+.. .+..+.+ .+..
T Consensus 304 ~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~--~~~~ 380 (751)
T 2xe4_A 304 KGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAV--RSNY 380 (751)
T ss_dssp SCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEE--CSSE
T ss_pred CCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEE--ECCE
Confidence 752 22 3343 344556667666554455555444 25677777532 12222 222332 3444444 4554
Q ss_pred E-EEEcCCCe--EEEEEC
Q 011924 405 M-ATAEPADF--VHVYDV 419 (475)
Q Consensus 405 l-a~~~~dg~--i~iwd~ 419 (475)
| ++...++. |.++++
T Consensus 381 lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 381 LVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCEEEEEEEec
Confidence 4 45555664 666775
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=0.00029 Score=69.56 Aligned_cols=142 Identities=16% Similarity=0.101 Sum_probs=93.3
Q ss_pred eEEECC-CCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCC-----CeEEEEECCCCCceE
Q 011924 310 HSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD-----KTCRIWDLRNLSESV 383 (475)
Q Consensus 310 ~~~~sp-~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~d-----g~v~iwd~~~~~~~~ 383 (475)
.++++| ++..|.++...+.|+.+|+..++.. .+.........++|+++|++|+.+... ..+.+.+........
T Consensus 141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~ 219 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVI 219 (430)
T ss_dssp EEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSE
T ss_pred EEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeee
Confidence 788998 4556666655578999998766544 343355678899999999966666542 134444432211111
Q ss_pred EEEecCCCceEEEEEcc-CCCEEEEEcCCCeEEEEECCCCeeEEEEec-cCCCeEEEEEcCCCCeEEEEEec
Q 011924 384 AVLKGNLGAIRSIRYTS-DGRYMATAEPADFVHVYDVKSGYEKEQEID-FFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 384 ~~~~~~~~~v~~l~~sp-dg~~la~~~~dg~i~iwd~~~~~~~~~~~~-~~~~i~~l~fspdg~~l~~~~~D 453 (475)
..+.. ......++++| +|.++++-..++.|..++..++........ ......+++|+|+|++|+++...
T Consensus 220 ~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 220 TELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp EEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred eeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 33332 23456889999 777777777788999999887654222221 22457899999999988777543
No 283
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.09 E-value=0.00052 Score=70.50 Aligned_cols=198 Identities=11% Similarity=0.013 Sum_probs=121.6
Q ss_pred cCcEEEEEec-CceEEEEeC-CCCCceEEEeeecCCC--------CceeEEEEEeCCCCCe---EEEEEeCCCeEEEEEC
Q 011924 198 KDKLLVAGGF-QGELICKHL-DRPGVSFCSRTTYDDN--------AITNAVEIYGSPSGAV---HFTASNNDCGVRDFDM 264 (475)
Q Consensus 198 ~~~~lvsg~~-dg~i~vw~~-~~~~~~~~~~~~~~~~--------~~v~~l~~~~s~~g~~---~l~s~s~dg~v~iwd~ 264 (475)
.+..|++++. ++.|..+|. .+.+............ .....+.+ +|.+.. +++.++.|+.|..+|.
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av--~p~~g~~~~rV~v~t~dg~l~AlDa 138 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAY--WPGDGKTPALILKTQLDGNVAALNA 138 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEE--ECCCSSSCCEEEEECTTSEEEEEET
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEE--EecCCcceeEEEEEcCCCEEEEEEC
Confidence 3556666666 889999998 7776655433221100 00122333 332221 2566678999999999
Q ss_pred CCCeeeeeeeccc-----cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe------CCCcEEEEE
Q 011924 265 GKYQLSKHFRFPW-----PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG------DNPDGLLVD 333 (475)
Q Consensus 265 ~~~~~~~~~~~~~-----~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~------~dg~i~iwd 333 (475)
.+++.+....... .+.. ...+. ++ .+++++ .++.|+-+|
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~s----------------------------sP~v~-~g-~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 139 ETGETVWKVENSDIKVGSTLTI----------------------------APYVV-KD-KVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp TTCCEEEEEECCCGGGTCBCCS----------------------------CCEEE-TT-EEEECCBCGGGTCCCEEEEEE
T ss_pred CCCCEEEeecCCCCCccceeec----------------------------CCEEE-CC-EEEEEecccccCCCCeEEEEE
Confidence 9999887765322 1110 11111 34 455544 378999999
Q ss_pred CCCCceEEEeecCCCC-------------------------------------e-EEEEEecCCCEEEEEeCC-------
Q 011924 334 SMTGKTIASLCGHLDF-------------------------------------S-FASAWHPNGVTFATGNQD------- 368 (475)
Q Consensus 334 ~~~~~~~~~l~~h~~~-------------------------------------v-~~~~~sp~g~~l~t~s~d------- 368 (475)
..+|+.+.++...... + ..+++.|...+++.+..+
T Consensus 189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~ 268 (599)
T 1w6s_A 189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNET 268 (599)
T ss_dssp TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGG
T ss_pred CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCc
Confidence 9999998877632211 0 134566777778877655
Q ss_pred ---------CeEEEEECCCCCceEEEEecCC----------CceEEEEEc-cCC---CEEEEEcCCCeEEEEECCCCeeE
Q 011924 369 ---------KTCRIWDLRNLSESVAVLKGNL----------GAIRSIRYT-SDG---RYMATAEPADFVHVYDVKSGYEK 425 (475)
Q Consensus 369 ---------g~v~iwd~~~~~~~~~~~~~~~----------~~v~~l~~s-pdg---~~la~~~~dg~i~iwd~~~~~~~ 425 (475)
+.|.-+|.++ ++.+-.++... .++ -+... .+| +.++.++.+|.++++|..+|+.+
T Consensus 269 ~r~gd~~y~~sv~Ald~~T-G~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 269 MRPGDNKWTMTIFGRDADT-GEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp GSCSCCTTSSEEEEEETTT-CCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred ccCCCccccceEEEEeCCC-CceeeEeecCCCccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 3799999987 66555544321 112 12222 578 56778899999999999999887
Q ss_pred EEEe
Q 011924 426 EQEI 429 (475)
Q Consensus 426 ~~~~ 429 (475)
....
T Consensus 347 w~~~ 350 (599)
T 1w6s_A 347 SANK 350 (599)
T ss_dssp EEEE
T ss_pred eccc
Confidence 6554
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.07 E-value=0.0048 Score=65.40 Aligned_cols=214 Identities=9% Similarity=-0.076 Sum_probs=126.0
Q ss_pred EEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe----eeeeee-c
Q 011924 201 LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ----LSKHFR-F 275 (475)
Q Consensus 201 ~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~----~~~~~~-~ 275 (475)
+|+.. ....|+..++...... .+.. ....+.+|++ .+.+..++++-...+.|+.+++.... ....+. .
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~---~l~~-~~~~~~gl~~--d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~ 469 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYT---SLIP-NLRNVVALDT--EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 469 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCE---EEEC-SCSSEEEEEE--ETTTTEEEEEETTTTEEEEEEC--------CEEEECSS
T ss_pred ccccc-cccceeEeeccCCcce---eeec-CCCceEEEee--cccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC
Confidence 44443 3456777777654433 2222 2344567777 77666667777777889888886531 111111 1
Q ss_pred cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEE-EEeCCCcEEEEECCCCceEEEeecCCCCeEEEE
Q 011924 276 PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLI-IVGDNPDGLLVDSMTGKTIASLCGHLDFSFASA 354 (475)
Q Consensus 276 ~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~-~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~ 354 (475)
..... .|++.+.++.|. +-...+.|.+.++........+.........|+
T Consensus 470 l~~P~-----------------------------GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIa 520 (791)
T 3m0c_C 470 IQAPD-----------------------------GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIV 520 (791)
T ss_dssp CSCCC-----------------------------EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEE
T ss_pred CCCcc-----------------------------eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEE
Confidence 12223 788988665554 445678899999874443333344456689999
Q ss_pred EecCCCEEEEEeC--CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEEECCCCeeEEEEec-
Q 011924 355 WHPNGVTFATGNQ--DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEID- 430 (475)
Q Consensus 355 ~sp~g~~l~t~s~--dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~~~~~~~~~~~~- 430 (475)
++|...+|+.+.. .+.|.+.++.. ......+.........|++++.+..|+.+. ..+.|..+++........+..
T Consensus 521 VDp~~g~LYwtD~g~~~~I~~~~~dG-~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~ 599 (791)
T 3m0c_C 521 VDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE 599 (791)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECT
T ss_pred EecCCCCEEEecCCCCCeEEEEecCC-CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCC
Confidence 9997555655543 26788888853 333333333445788999998777666664 457899999865433333322
Q ss_pred -cCCCeEEEEEcCCCCeEEEEEec
Q 011924 431 -FFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 431 -~~~~i~~l~fspdg~~l~~~~~D 453 (475)
......+|++. +.+|+.+-+.
T Consensus 600 ~~l~~P~glav~--~~~lYwtD~~ 621 (791)
T 3m0c_C 600 KRLAHPFSLAVF--EDKVFWTDII 621 (791)
T ss_dssp TTTSSEEEEEEE--TTEEEEEETT
T ss_pred CccCCCCEEEEe--CCEEEEEECC
Confidence 12345566663 4467666443
No 285
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.05 E-value=0.017 Score=59.66 Aligned_cols=230 Identities=7% Similarity=-0.020 Sum_probs=137.2
Q ss_pred eEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE---cCcEEEEEecCceEEEEeCCCCC
Q 011924 144 DVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGFQGELICKHLDRPG 220 (475)
Q Consensus 144 ~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~~lvsg~~dg~i~vw~~~~~~ 220 (475)
.|+++....|...+..+.....++.+.+ + .....|++ ++.++++-..++.|..++++...
T Consensus 8 ~Ll~s~~~~I~~i~l~~~~~~~~~~~~~---------------~--~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~ 70 (628)
T 4a0p_A 8 FLLFSRRADIRRISLETNNNNVAIPLTG---------------V--KEASALDFDVTDNRIYWTDISLKTISRAFMNGSA 70 (628)
T ss_dssp EEEEEETTEEEEEESSCTTCEEECCCCS---------------C--SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEEEEeCCcEEEEECCCCCcceEEEcCC---------------C--CceEEEEEECCCCEEEEEECCCCeEEEEECCCCC
Confidence 3555566667766665443333222211 1 13567777 34555566678999988887544
Q ss_pred ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeee-eccccEEeccCCceEEEEEEeecccc
Q 011924 221 VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHF-RFPWPVNVSSSYCIILLCRLLNFMTE 299 (475)
Q Consensus 221 ~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~~~v~~s~~~~~l~~~~v~d~~~~ 299 (475)
.. .+..........|++ .+.+..++++-...+.|.+.++........+ .......
T Consensus 71 ~~---~v~~~g~~~P~GlAv--D~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~------------------- 126 (628)
T 4a0p_A 71 LE---HVVEFGLDYPEGMAV--DWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPR------------------- 126 (628)
T ss_dssp CE---EEECSSCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEE-------------------
T ss_pred cE---EEEeCCCCCcceEEE--EeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcc-------------------
Confidence 33 222222234567777 6666666777777789999998654322212 1222234
Q ss_pred eEEEEeeeeeeEEECCCCcEEEEEe--CCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEe-CCCeEEEEEC
Q 011924 300 KVIICLLCLQHSSQSPDGKLLIIVG--DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDL 376 (475)
Q Consensus 300 ~~~~~~~~i~~~~~sp~g~~l~~~~--~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~ 376 (475)
.+++.|....|..+. ..+.|...++.... ...+-........+++++++..|+.+. ..+.|...|+
T Consensus 127 ----------~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 127 ----------ALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp ----------EEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ----------cEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcC
Confidence 889998554555443 35678888875333 333333456788999999766666654 4678999998
Q ss_pred CCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEE
Q 011924 377 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE 428 (475)
Q Consensus 377 ~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~ 428 (475)
..... ..+.........+++.. +++.++-...+.|...|..+|.....+
T Consensus 196 dG~~~--~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 196 LGLNR--EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp TSCSC--EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCce--EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEE
Confidence 64222 33444344556888765 444455555789999997777544443
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.02 E-value=0.0048 Score=61.37 Aligned_cols=141 Identities=13% Similarity=0.161 Sum_probs=86.1
Q ss_pred eEEECC-CCcEEEEEeCCCcEEEEECC-------CCce-----------EEE-ee-cCCCCeEEEEEecCCCEEEEE-eC
Q 011924 310 HSSQSP-DGKLLIIVGDNPDGLLVDSM-------TGKT-----------IAS-LC-GHLDFSFASAWHPNGVTFATG-NQ 367 (475)
Q Consensus 310 ~~~~sp-~g~~l~~~~~dg~i~iwd~~-------~~~~-----------~~~-l~-~h~~~v~~~~~sp~g~~l~t~-s~ 367 (475)
.++++| ++.++++-..++.|+.+|+. ++.. ... +. +.....+.++|+|+|++|+.+ +.
T Consensus 251 giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~ 330 (496)
T 3kya_A 251 GATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN 330 (496)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred EEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC
Confidence 778999 55656666678889999987 5543 112 21 233456899999999965554 45
Q ss_pred CCeEEEEECCCCCceE---EEEecC---C------------CceE-EEEEc-------cCCCEEEEEcCCCeEEEEECCC
Q 011924 368 DKTCRIWDLRNLSESV---AVLKGN---L------------GAIR-SIRYT-------SDGRYMATAEPADFVHVYDVKS 421 (475)
Q Consensus 368 dg~v~iwd~~~~~~~~---~~~~~~---~------------~~v~-~l~~s-------pdg~~la~~~~dg~i~iwd~~~ 421 (475)
.+.|+.++.......+ ..+.+. . .... .++.. ++|.++++=..++.|+.++ .+
T Consensus 331 ~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~ 409 (496)
T 3kya_A 331 NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PE 409 (496)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TT
T ss_pred CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CC
Confidence 7789887653212111 222221 0 1234 44554 5677777767788999999 56
Q ss_pred CeeEEEEecc------------------------CCCeEEEEEcCCCCeEEEEEe
Q 011924 422 GYEKEQEIDF------------------------FGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 422 ~~~~~~~~~~------------------------~~~i~~l~fspdg~~l~~~~~ 452 (475)
|. +.++.+. .....+|++++++..|+++-.
T Consensus 410 G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~ 463 (496)
T 3kya_A 410 GI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQ 463 (496)
T ss_dssp CB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEET
T ss_pred CC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeC
Confidence 64 3344321 124779999997445555543
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.95 E-value=0.012 Score=60.78 Aligned_cols=213 Identities=10% Similarity=0.001 Sum_probs=132.6
Q ss_pred EEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc-ccE
Q 011924 201 LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP-WPV 279 (475)
Q Consensus 201 ~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-~~v 279 (475)
+|+.+ ..+.|+..+++...... ......-....+|+| ++.+..++++-...+.|..+++........+... ...
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~--~~~~~~~~~~~~l~~--d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNV--AIPLTGVKEASALDF--DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEE--ECCCCSCSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred EEEEE-eCCcEEEEECCCCCcce--EEEcCCCCceEEEEE--ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 44444 56788888987654331 121122234567777 8877776777778899999998654332222211 223
Q ss_pred EeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEE-EEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecC
Q 011924 280 NVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLL-IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPN 358 (475)
Q Consensus 280 ~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l-~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~ 358 (475)
. .+++.+.+..| ++-...+.|.+.++........+.........++++|.
T Consensus 83 ~-----------------------------GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~ 133 (628)
T 4a0p_A 83 E-----------------------------GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPA 133 (628)
T ss_dssp C-----------------------------EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETT
T ss_pred c-----------------------------eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccC
Confidence 3 78888755544 44455678999998644333233344566899999995
Q ss_pred CCEEEEEeC--CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEEECCCCeeEEEEeccCCCe
Q 011924 359 GVTFATGNQ--DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEIDFFGEI 435 (475)
Q Consensus 359 g~~l~t~s~--dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~~~~~~~~~~~~~~~~i 435 (475)
...|+.... .+.|...++.. .....+.........++++++++.|+.+. ..+.|..+|+..... ..+.......
T Consensus 134 ~G~lY~tD~g~~~~I~r~~~dG--~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P 210 (628)
T 4a0p_A 134 EGFMYWTEWGGKPKIDRAAMDG--SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHP 210 (628)
T ss_dssp TTEEEEEECSSSCEEEEEETTS--CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCE
T ss_pred CCeEEEeCCCCCCEEEEEeCCC--CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCc
Confidence 555555543 46788788753 33333333455678999999877666664 467899999865433 3333444566
Q ss_pred EEEEEcCCCCeEEEEEe
Q 011924 436 SGISFSPDTESLFIGVW 452 (475)
Q Consensus 436 ~~l~fspdg~~l~~~~~ 452 (475)
.++++.. ..|+.+-+
T Consensus 211 ~glav~~--~~ly~tD~ 225 (628)
T 4a0p_A 211 FGLTQYQ--DYIYWTDW 225 (628)
T ss_dssp EEEEEET--TEEEEEET
T ss_pred eEEEEEC--CEEEEecC
Confidence 7888765 46666654
No 288
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.93 E-value=0.00099 Score=65.74 Aligned_cols=152 Identities=14% Similarity=0.108 Sum_probs=91.6
Q ss_pred eeEEEEEeCCC--CCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEE
Q 011924 235 TNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSS 312 (475)
Q Consensus 235 v~~l~~~~s~~--g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~ 312 (475)
...|++ +|+ +..++++-.. +.|+.++..+++............ .++
T Consensus 141 P~gvav--d~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~-----------------------------gia 188 (433)
T 4hw6_A 141 IWRMMF--DPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCA-----------------------------DVN 188 (433)
T ss_dssp CCEEEE--CTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEE-----------------------------EEE
T ss_pred CceEEE--ccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCcc-----------------------------EEE
Confidence 457788 874 3343554433 889999998777655444333455 899
Q ss_pred ECCCCcEEEEEeCC---C-cEEEEECCCCce-EEEeecCCCCeEEEEEec-CCCEEEEEeCCCeEEEEECCCCCceEEEE
Q 011924 313 QSPDGKLLIIVGDN---P-DGLLVDSMTGKT-IASLCGHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVL 386 (475)
Q Consensus 313 ~sp~g~~l~~~~~d---g-~i~iwd~~~~~~-~~~l~~h~~~v~~~~~sp-~g~~l~t~s~dg~v~iwd~~~~~~~~~~~ 386 (475)
++++|+++++.... . .+...+...+.. ...+. .......++++| +|++.++-..++.|+.+|... +.....+
T Consensus 189 vd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~-g~~~~~~ 266 (433)
T 4hw6_A 189 FTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT-GTLTEEE 266 (433)
T ss_dssp ECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT-CCEEEEE
T ss_pred ECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC-CeEEEEE
Confidence 99999944443311 1 233333322211 11222 234456789999 777666666778999999864 4431222
Q ss_pred -ec-CCCceEEEEEccCCCEEEEE-cCCCeEEEEECC
Q 011924 387 -KG-NLGAIRSIRYTSDGRYMATA-EPADFVHVYDVK 420 (475)
Q Consensus 387 -~~-~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~~ 420 (475)
.. .......++|+|+|++|+.+ ...+.|+.++..
T Consensus 267 ~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 267 VMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred eccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 21 12233479999999955554 456889998865
No 289
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.85 E-value=0.008 Score=56.64 Aligned_cols=200 Identities=14% Similarity=0.125 Sum_probs=117.3
Q ss_pred cEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEe--CCCCCe--EEEEEe-C--CCeEEEEECC--CCeee
Q 011924 200 KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYG--SPSGAV--HFTASN-N--DCGVRDFDMG--KYQLS 270 (475)
Q Consensus 200 ~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~--s~~g~~--~l~s~s-~--dg~v~iwd~~--~~~~~ 270 (475)
.+++.....+.+.++|+. ++.. .... .+.++.+.+.. .-.|+. ++++.. . +++|++|++. ++. +
T Consensus 41 s~ii~t~k~~gL~Vydl~-G~~l---~~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLD-GKML---HSYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp CEEEEEETTTEEEEEETT-SCEE---EEEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred cEEEEEcCCCCEEEEcCC-CcEE---EEcc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 455555677889999994 3333 2222 24567777621 112222 233333 3 5789999773 333 3
Q ss_pred eeeecc-ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEE--CCC-Cc-EEEEEeCCCcEEEEECC-------CCc
Q 011924 271 KHFRFP-WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQ--SPD-GK-LLIIVGDNPDGLLVDSM-------TGK 338 (475)
Q Consensus 271 ~~~~~~-~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~--sp~-g~-~l~~~~~dg~i~iwd~~-------~~~ 338 (475)
..+... .++.- ....+..+++ +|. ++ ++++...+|.+..|++. +++
T Consensus 114 ~~i~~~~~pv~t----------------------~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~ 171 (355)
T 3amr_A 114 QSMTDPDHPIAT----------------------AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGK 171 (355)
T ss_dssp EECSCTTSCEEC----------------------CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEE
T ss_pred eeccccccCcCC----------------------CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccce
Confidence 333211 01110 0001115666 774 54 57777788999998883 335
Q ss_pred eEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCC----CceEEEEe-cC-CCceEEEEE--ccCCC-EEEEEc
Q 011924 339 TIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL----SESVAVLK-GN-LGAIRSIRY--TSDGR-YMATAE 409 (475)
Q Consensus 339 ~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~----~~~~~~~~-~~-~~~v~~l~~--spdg~-~la~~~ 409 (475)
.++++.. .+.+..|...+....|+.+-++.-|..++.+-. .+.+..+. ++ ...+..|++ .++|+ +|++++
T Consensus 172 lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 172 KVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp EEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred EEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 6677764 457888999998889999999877666675421 23443332 11 135778877 56666 565555
Q ss_pred -CCCeEEEEECC-CCeeEEEEe
Q 011924 410 -PADFVHVYDVK-SGYEKEQEI 429 (475)
Q Consensus 410 -~dg~i~iwd~~-~~~~~~~~~ 429 (475)
.++.+.+||.. +.+.+..+.
T Consensus 251 QG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 251 QGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp GGGTEEEEEESSTTCCEEEEEE
T ss_pred CCCCEEEEEECCCCCcEEEEEE
Confidence 57899999986 555555543
No 290
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.85 E-value=0.0012 Score=67.74 Aligned_cols=190 Identities=15% Similarity=0.163 Sum_probs=108.9
Q ss_pred ceEEEEeCCCCCceEEEeeecCC----CCceeEEEEEeC-CCCC--eEEEEEeCCCeEEEEECCCCeeeeeeeccccEEe
Q 011924 209 GELICKHLDRPGVSFCSRTTYDD----NAITNAVEIYGS-PSGA--VHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNV 281 (475)
Q Consensus 209 g~i~vw~~~~~~~~~~~~~~~~~----~~~v~~l~~~~s-~~g~--~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~ 281 (475)
+.|..+|..+.+.....+...+. ......+.+... .+|+ .+++.++.+|.++++|..+++.+..+.....+++
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 370 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITW 370 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccc
Confidence 68999999888877654443211 011111112101 4664 3578889999999999999999877764321110
Q ss_pred ccCCceEEEEEEeecccceEEE------------------Eee--------eeeeEEECCCCcEEEEEe-----------
Q 011924 282 SSSYCIILLCRLLNFMTEKVII------------------CLL--------CLQHSSQSPDGKLLIIVG----------- 324 (475)
Q Consensus 282 s~~~~~l~~~~v~d~~~~~~~~------------------~~~--------~i~~~~~sp~g~~l~~~~----------- 324 (475)
. .-.++.+++.+. ... .-..++++|+..++++..
T Consensus 371 ~---------~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~ 441 (582)
T 1flg_A 371 A---------SHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEE 441 (582)
T ss_dssp E---------EEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECC
T ss_pred c---------ccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeeccc
Confidence 0 000111111100 000 001456666544444332
Q ss_pred ----------------------CCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCce
Q 011924 325 ----------------------DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES 382 (475)
Q Consensus 325 ----------------------~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~ 382 (475)
..|.|..||+.+|+.+.+..... ++..-.....+.+++.++.|+.++.||.++ ++.
T Consensus 442 ~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~t-G~~ 519 (582)
T 1flg_A 442 VSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKS-GKE 519 (582)
T ss_dssp CCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTT-CCE
T ss_pred ccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCC-CCE
Confidence 25789999999999887776332 222222233567888899999999999987 777
Q ss_pred EEEEecCCCce-EEEEEccCCC-EEEEEc
Q 011924 383 VAVLKGNLGAI-RSIRYTSDGR-YMATAE 409 (475)
Q Consensus 383 ~~~~~~~~~~v-~~l~~spdg~-~la~~~ 409 (475)
+-.++...+.+ .-+.|..+|+ |+++.+
T Consensus 520 lW~~~~~~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 520 LWKFQTGSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp EEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred EEEecCCCCcccCceEEEECCEEEEEEEc
Confidence 77776544322 2366777886 555443
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.84 E-value=0.0017 Score=60.57 Aligned_cols=154 Identities=8% Similarity=0.019 Sum_probs=106.0
Q ss_pred eeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccc---------cEEeccCCceEEEEEEeecccceEEEEe
Q 011924 235 TNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW---------PVNVSSSYCIILLCRLLNFMTEKVIICL 305 (475)
Q Consensus 235 v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~---------~v~~s~~~~~l~~~~v~d~~~~~~~~~~ 305 (475)
-.++.| .+....++++.-..++|..|+...+..... ..+. .+.
T Consensus 15 PE~~~w--d~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~s------------------------- 66 (334)
T 2p9w_A 15 PEDTIY--DRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMS------------------------- 66 (334)
T ss_dssp CSCEEE--ETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEE-------------------------
T ss_pred CcCccC--cCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceee-------------------------
Confidence 345777 665555455555789999999975543332 2111 123
Q ss_pred eeeeeEEE---CCCCcEEEEEeC-------------CCcEEEEECC---CCceEEEee--cC-----------CCCeEEE
Q 011924 306 LCLQHSSQ---SPDGKLLIIVGD-------------NPDGLLVDSM---TGKTIASLC--GH-----------LDFSFAS 353 (475)
Q Consensus 306 ~~i~~~~~---sp~g~~l~~~~~-------------dg~i~iwd~~---~~~~~~~l~--~h-----------~~~v~~~ 353 (475)
.+.| .|+++++++... +..+..+|+. +++.+.... .. ......+
T Consensus 67 ----Gl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 67 ----GLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp ----EEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEE
T ss_pred ----EEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCcee
Confidence 8899 688888876442 5779999998 787765443 11 1247899
Q ss_pred EEecCCCEEEEEeCC-CeEEEEECCCCCceEEEEe--c----CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCC
Q 011924 354 AWHPNGVTFATGNQD-KTCRIWDLRNLSESVAVLK--G----NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 422 (475)
Q Consensus 354 ~~sp~g~~l~t~s~d-g~v~iwd~~~~~~~~~~~~--~----~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~ 422 (475)
+..++|+.-++++.. +.|...+.. ++.+..+. . .....+.++++|+|+.|++....+.|..+|+.+.
T Consensus 143 avD~~GnaYVt~s~~~~~I~rV~pd--G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 143 AQDRDGNSYVAFALGMPAIARVSAD--GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EECTTSCEEEEEEESSCEEEEECTT--SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred EECCCCCEEEeCCCCCCeEEEEeCC--CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 999999999999888 877777764 33333321 1 1123669999999999998877999999998854
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.83 E-value=9e-05 Score=77.92 Aligned_cols=211 Identities=10% Similarity=-0.020 Sum_probs=117.2
Q ss_pred EEEEE--cCcEEE-EEecCceEEEEeCCCC----CceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECC
Q 011924 193 STLAV--KDKLLV-AGGFQGELICKHLDRP----GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (475)
Q Consensus 193 ~~l~~--~~~~lv-sg~~dg~i~vw~~~~~----~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~ 265 (475)
..|+| .++.|+ +-...+.|..+++... ... .+..........|++ .+.+..++++-...+.|.++++.
T Consensus 409 ~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~---~~i~~~~~~P~glav--D~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 409 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD---TVISRDIQAPDGLAV--DWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC---CBCCSCC--CCCEEC--CCSSSBCEECCTTTSCEEEEBSS
T ss_pred EEEccccccCeEEEEecCCCeEEEEecCCCCCCcceE---EEEeCCCCCcceEEE--EeeCCcEEEEeccCCeEEEEecC
Confidence 35555 344444 4445678888887641 111 111111122345666 65555556665667889999986
Q ss_pred CCeeeeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC--CCcEEEEECCCCceEEE
Q 011924 266 KYQLSKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD--NPDGLLVDSMTGKTIAS 342 (475)
Q Consensus 266 ~~~~~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~--dg~i~iwd~~~~~~~~~ 342 (475)
.......+. ...... .++++|.+.+|+.+.. .+.|..+++. |.....
T Consensus 484 g~~~~~l~~~~~~~P~-----------------------------giavDp~~g~ly~td~~~~~~I~~~~~d-G~~~~~ 533 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPR-----------------------------AIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYS 533 (699)
T ss_dssp SCCEEEECCCSSCCCC-----------------------------CEECCSSSSCCEECCCSSSCCEEBCCSS-SCCCCE
T ss_pred CCceEEEEeCCCCCcc-----------------------------eEEEccCCCcEEEcccCCCCeEEEEeCC-CCCeeE
Confidence 543332222 112223 7889996655555432 3677777765 332222
Q ss_pred e-ecCCCCeEEEEEecCCCEEE-EEeCCCeEEEEECCCCCceEEEEec---CCCceEEEEEccCCCEEEEEcCCCeEEEE
Q 011924 343 L-CGHLDFSFASAWHPNGVTFA-TGNQDKTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPADFVHVY 417 (475)
Q Consensus 343 l-~~h~~~v~~~~~sp~g~~l~-t~s~dg~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~spdg~~la~~~~dg~i~iw 417 (475)
+ .........|+|+|++..|+ +-+..+.|.++++.. ...+.+.. .......|++..+ +++++....+.|..+
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG--~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG--GNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSA 610 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS--SCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEE
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC--CceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEE
Confidence 2 22334567899999755554 445567899999853 22223321 1223345666544 455555567899999
Q ss_pred ECCCCeeEEEEeccCCCeEEEEEc
Q 011924 418 DVKSGYEKEQEIDFFGEISGISFS 441 (475)
Q Consensus 418 d~~~~~~~~~~~~~~~~i~~l~fs 441 (475)
+..+|..+..+......+.+|++.
T Consensus 611 d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 611 NRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp ETTTEEEEECCCTTCSSCCCCCBC
T ss_pred EccCCCceEEeecCCCCCcEEEEe
Confidence 988887766654333344555443
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.80 E-value=0.0066 Score=57.98 Aligned_cols=224 Identities=13% Similarity=0.109 Sum_probs=117.0
Q ss_pred EEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEe--eecCCCCceeEEEEEeCCC---CCeEEEEEeCC-----CeEE
Q 011924 193 STLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSR--TTYDDNAITNAVEIYGSPS---GAVHFTASNND-----CGVR 260 (475)
Q Consensus 193 ~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~--~~~~~~~~v~~l~~~~s~~---g~~~l~s~s~d-----g~v~ 260 (475)
..|++ +|+++++ ...|.|.+++ + ........ ...........|++ +|+ +..++++-+.. ..|.
T Consensus 34 ~~ia~~pdG~l~V~-e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~--~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 34 WALAFLPDGGMLIA-ERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLAL--HPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp EEEEECTTSCEEEE-ETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEE--CTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred eEEEEcCCCeEEEE-eCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEE--CCCCCCCCEEEEEEecCCCCCccEEE
Confidence 46777 6765554 5669999888 2 22111111 11122345677888 997 55545554432 5677
Q ss_pred EEECCCCeee------eeeec-cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC-------
Q 011924 261 DFDMGKYQLS------KHFRF-PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN------- 326 (475)
Q Consensus 261 iwd~~~~~~~------~~~~~-~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d------- 326 (475)
.|+....+.. ..+.. ..... ....++|.|+|.+.++.+..
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h--------------------------~~~~l~~~pdG~Lyv~~G~~~~~~~~~ 162 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLH--------------------------SGGRIAFGPDGMLYVTTGEVYERELAQ 162 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCC--------------------------CCCCEEECTTSCEEEECCCTTCGGGGG
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCc--------------------------CCceEEECCCCCEEEEECCCCCCcccc
Confidence 7776543211 00110 00000 00178999999877765432
Q ss_pred ------CcEEEEECCCC-------------ceEEEeecCCCCeEEEEEec-CCCEEEEEeCCCeE------EEEECCCCC
Q 011924 327 ------PDGLLVDSMTG-------------KTIASLCGHLDFSFASAWHP-NGVTFATGNQDKTC------RIWDLRNLS 380 (475)
Q Consensus 327 ------g~i~iwd~~~~-------------~~~~~l~~h~~~v~~~~~sp-~g~~l~t~s~dg~v------~iwd~~~~~ 380 (475)
+.|.-++.... .....-.++. ....++|+| ++.++++-.....+ .|.-+....
T Consensus 163 d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~ 241 (352)
T 2ism_A 163 DLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGG 241 (352)
T ss_dssp CTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTC
T ss_pred CCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCC
Confidence 45555554320 1111112332 356789999 67766654433331 122222111
Q ss_pred -----------------ceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCee------EEEEeccCCCeEE
Q 011924 381 -----------------ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE------KEQEIDFFGEISG 437 (475)
Q Consensus 381 -----------------~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~------~~~~~~~~~~i~~ 437 (475)
.++..+.. ..+...++| .+|.++++.-..+.|...++..... ...+..-.+.+.+
T Consensus 242 nyGwp~~~g~~~~~~~~~p~~~~~~-~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~ 319 (352)
T 2ism_A 242 NYGWPRVVGRGNDPRYRDPLYFWPQ-GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLRE 319 (352)
T ss_dssp BCCTTTCCSCCCCTTSCCCSEECTT-CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEE
T ss_pred cCCCCcccCCCCCCCCcCCeEecCC-CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeE
Confidence 23334422 235667888 5677776666677888887754321 1222233478999
Q ss_pred EEEcCCCCeEEEE
Q 011924 438 ISFSPDTESLFIG 450 (475)
Q Consensus 438 l~fspdg~~l~~~ 450 (475)
+++.|||...++.
T Consensus 320 v~~~pdG~lyv~~ 332 (352)
T 2ism_A 320 VQVGPDGALYVTT 332 (352)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEECCCCcEEEEE
Confidence 9999999655554
No 294
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.80 E-value=0.0089 Score=56.87 Aligned_cols=190 Identities=12% Similarity=0.088 Sum_probs=105.9
Q ss_pred cCceEEEEeCCCCCceE-EEeeecC----CCCceeEEEEEeCCCCCeEEEEE-eC--CCeEEEEECCCC-ee---eeeee
Q 011924 207 FQGELICKHLDRPGVSF-CSRTTYD----DNAITNAVEIYGSPSGAVHFTAS-NN--DCGVRDFDMGKY-QL---SKHFR 274 (475)
Q Consensus 207 ~dg~i~vw~~~~~~~~~-~~~~~~~----~~~~v~~l~~~~s~~g~~~l~s~-s~--dg~v~iwd~~~~-~~---~~~~~ 274 (475)
.+|.|.++++....... ....... ..-....+.+....+|...|+++ .. +.+|.+|++... .. +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 68999999987443221 1122211 12245566664443555334443 22 467888876542 22 22222
Q ss_pred c--cccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe-----------------CCCcEEEEECC
Q 011924 275 F--PWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG-----------------DNPDGLLVDSM 335 (475)
Q Consensus 275 ~--~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-----------------~dg~i~iwd~~ 335 (475)
. -...+ .+.+.++|.+.++.. ..|.++-++.
T Consensus 161 g~~~~~pN-----------------------------D~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 161 HKLLPSVN-----------------------------DIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp CTTCSSEE-----------------------------EEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred cCCCCCCc-----------------------------eEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 2 12233 788889998777653 1234444443
Q ss_pred CCceEEEeecCCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCCCce--EEEEecCCCceEEEEEcc-CCCEEEEEcCC
Q 011924 336 TGKTIASLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSES--VAVLKGNLGAIRSIRYTS-DGRYMATAEPA 411 (475)
Q Consensus 336 ~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~~~~--~~~~~~~~~~v~~l~~sp-dg~~la~~~~d 411 (475)
++. ..+...-...+.++|+||+++|+.+. ..+.|..|++...+.. .+.+ ...+..-.+++.+ +|++.+++..+
T Consensus 211 -~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 211 -NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp -TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred -CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 433 23333345678999999998887775 4678999998643332 2233 2245677899999 59987766544
Q ss_pred -CeEEEEECC--CCeeEEEEe
Q 011924 412 -DFVHVYDVK--SGYEKEQEI 429 (475)
Q Consensus 412 -g~i~iwd~~--~~~~~~~~~ 429 (475)
+.|..|+.. .+..+..+.
T Consensus 288 g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 288 GMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp HHHHHSCCTTSCCCEEEEEEE
T ss_pred ceEEEEECCCCCCCCEEEEEE
Confidence 344444533 244444443
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.77 E-value=0.027 Score=53.00 Aligned_cols=224 Identities=11% Similarity=0.009 Sum_probs=117.8
Q ss_pred eeEEEEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeec-CCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe
Q 011924 190 TQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTY-DDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (475)
Q Consensus 190 ~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~-~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~ 268 (475)
..+.++.++.+.+++++..|.|.. ..+... ........ ...+.+..|.+ .+++. +++++ .++.|.. ....++
T Consensus 80 ~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~-tW~~~~~~~~~~~~~~~i~~--~~~~~-~~~~~-~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 80 YRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQ-SWSQIPLDPKLPGSPRLIKA--LGNGS-AEMIT-NVGAIYR-TKDSGK 152 (327)
T ss_dssp CEEEEEEEETTEEEEEEETTEEEE-ESSTTS-SCEECCCCTTCSSCEEEEEE--EETTE-EEEEE-TTCCEEE-ESSTTS
T ss_pred ccEEEEEecCCeEEEEECCCeEEE-ECCCCC-CceECccccCCCCCeEEEEE--ECCCC-EEEEe-CCccEEE-EcCCCC
Confidence 357788885455555667775543 333222 22111111 12234566665 55554 34444 4554422 122232
Q ss_pred eeeeee--ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEe-ec
Q 011924 269 LSKHFR--FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL-CG 345 (475)
Q Consensus 269 ~~~~~~--~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l-~~ 345 (475)
.-.... ....+. .+++.|++.+++++ ..+.++.-.-..|+....+ ..
T Consensus 153 tW~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~~~ 202 (327)
T 2xbg_A 153 NWQALVQEAIGVMR-----------------------------NLNRSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHNRT 202 (327)
T ss_dssp SEEEEECSCCCCEE-----------------------------EEEECTTSCEEEEE-TTSSEEEEECTTCSSCEEEECC
T ss_pred CCEEeecCCCcceE-----------------------------EEEEcCCCcEEEEE-CCCcEEEEeCCCCCceeECCCC
Confidence 222221 233445 88899988877666 4455544321113332222 23
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEec----CCCceEEEEEccCCCEEEEEcCCCeEEEEECCC
Q 011924 346 HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG----NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 421 (475)
Q Consensus 346 h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~----~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~ 421 (475)
....+..+++.|++++++ ++.+|.+.+++... +..-..+.. ....+..+++.|++.+++++. ++.| ++....
T Consensus 203 ~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~Dg 278 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDG 278 (327)
T ss_dssp SSSCEEEEEECTTSCEEE-EETTTEEEEEETTE-EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESST
T ss_pred CCCccceeEECCCCCEEE-EeCCceEEEecCCC-CCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCC
Confidence 456788999999887654 45678887774221 221111111 123578999999888777765 5656 344444
Q ss_pred CeeEEEEe---ccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 422 GYEKEQEI---DFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 422 ~~~~~~~~---~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
|..-..+. .....+.++.|.+++. +++++.+|.
T Consensus 279 G~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~ 314 (327)
T 2xbg_A 279 GQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGI 314 (327)
T ss_dssp TSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTE
T ss_pred CcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCce
Confidence 43322222 1245678899986554 556666653
No 296
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.76 E-value=0.0079 Score=62.70 Aligned_cols=206 Identities=13% Similarity=-0.021 Sum_probs=114.8
Q ss_pred cCcEEEEEec-CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEe-CC-----CeEEEEECCCCeee
Q 011924 198 KDKLLVAGGF-QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN-ND-----CGVRDFDMGKYQLS 270 (475)
Q Consensus 198 ~~~~lvsg~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s-~d-----g~v~iwd~~~~~~~ 270 (475)
++.++++||. .+.+.+||..+........ .... ..-.++.+ .++|+. ++.|+ .+ ..+.+||..+.+..
T Consensus 253 ~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~-~~~~-R~~~s~~~--~~dg~i-yv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 253 NGQIVVTGGNDAKKTSLYDSSSDSWIPGPD-MQVA-RGYQSSAT--MSDGRV-FTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp TSCEEEECSSSTTCEEEEEGGGTEEEECCC-CSSC-CSSCEEEE--CTTSCE-EEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred CCCEEEeCCCCCCceEEecCcCCceeECCC-CCcc-ccccceEE--ecCCeE-EEEeCcccCCcccccceEeCCCCCcce
Confidence 8899999984 4589999987654332111 1111 11123334 568875 67766 34 56899999876643
Q ss_pred eee-----ecccc------------EEec-cCCceE-----EEEEEeecccceEEEEee-------------eeeeEEEC
Q 011924 271 KHF-----RFPWP------------VNVS-SSYCII-----LLCRLLNFMTEKVIICLL-------------CLQHSSQS 314 (475)
Q Consensus 271 ~~~-----~~~~~------------v~~s-~~~~~l-----~~~~v~d~~~~~~~~~~~-------------~i~~~~~s 314 (475)
..- ..... ..|. .++..+ ..+..||..+........ ...++.+.
T Consensus 328 ~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~ 407 (656)
T 1k3i_A 328 SLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD 407 (656)
T ss_dssp EETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE
T ss_pred eCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEecc
Confidence 320 00000 0011 111111 256778887665432211 11233343
Q ss_pred -CCCcEEEEEeCCC-----------cEEEEECCCCceEEEe--ecCCCCe-EEEEEecCCCEEEEEeCC-----------
Q 011924 315 -PDGKLLIIVGDNP-----------DGLLVDSMTGKTIASL--CGHLDFS-FASAWHPNGVTFATGNQD----------- 368 (475)
Q Consensus 315 -p~g~~l~~~~~dg-----------~i~iwd~~~~~~~~~l--~~h~~~v-~~~~~sp~g~~l~t~s~d----------- 368 (475)
.+++++++|+.++ .+.+||..+..-.... ..+.... .+++..|++++++.|+.+
T Consensus 408 ~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~ 487 (656)
T 1k3i_A 408 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 487 (656)
T ss_dssp TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred CCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcc
Confidence 3788888887532 5778888776644332 2222222 345667899999999864
Q ss_pred CeEEEEECCCCCceEEEEe---cCCCceEEEEEccCCCEEEEEcC
Q 011924 369 KTCRIWDLRNLSESVAVLK---GNLGAIRSIRYTSDGRYMATAEP 410 (475)
Q Consensus 369 g~v~iwd~~~~~~~~~~~~---~~~~~v~~l~~spdg~~la~~~~ 410 (475)
..+.+||..+ .+- ..+. ..........+.|+|++++.|+.
T Consensus 488 ~~v~~ydp~t-~~W-~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 488 FTPEIYVPEQ-DTF-YKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCEEEEGGG-TEE-EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cceEEEcCCC-Cce-eecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 4689999865 331 2222 11222334556799999999985
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.74 E-value=0.025 Score=58.39 Aligned_cols=201 Identities=7% Similarity=0.001 Sum_probs=112.8
Q ss_pred EEEEEE--cCcEEE-EEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe
Q 011924 192 VSTLAV--KDKLLV-AGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (475)
Q Consensus 192 v~~l~~--~~~~lv-sg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~ 268 (475)
..+|++ .++.|+ +=...+.|..++++..... ..+....-.....|++ .+.+..++++-...+.|.+.++....
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~--~~v~~~~~~~P~GlAv--D~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV--QNVVVSGLLSPDGLAC--DWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC-----C--EEEECSSCSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce--EEEEeCCCCCcCeEEE--EecCCEEEEEeCCCCEEEEEECCCCC
Confidence 456666 344444 5455688888887654211 1222222245678888 77666667777788999999987543
Q ss_pred eeeee-eccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe--CCCcEEEEECCCCceEEEeec
Q 011924 269 LSKHF-RFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG--DNPDGLLVDSMTGKTIASLCG 345 (475)
Q Consensus 269 ~~~~~-~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~--~dg~i~iwd~~~~~~~~~l~~ 345 (475)
....+ ....... .+++.|.+..|..+. ..+.|...++...........
T Consensus 118 ~~~l~~~~l~~P~-----------------------------~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~ 168 (619)
T 3s94_A 118 RKVLFWQELDQPR-----------------------------AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS 168 (619)
T ss_dssp CEEEECSSCSCCC-----------------------------CEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEEEeCCCCCCc-----------------------------eEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC
Confidence 22222 1112223 788998655555543 246677777653322223333
Q ss_pred CCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCee
Q 011924 346 HLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE 424 (475)
Q Consensus 346 h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~ 424 (475)
.-.....++++|++..|+.+. ..+.|...|+.. ........+.......+++..+ ...++-...+.|...|..+|..
T Consensus 169 ~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 169 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC-CEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC-CccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 445688999999766665554 466788888853 2222222212223346777655 3444444567899999877754
Q ss_pred EEE
Q 011924 425 KEQ 427 (475)
Q Consensus 425 ~~~ 427 (475)
...
T Consensus 247 ~~~ 249 (619)
T 3s94_A 247 LRE 249 (619)
T ss_dssp CEE
T ss_pred cEE
Confidence 433
No 298
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.68 E-value=0.019 Score=53.24 Aligned_cols=203 Identities=16% Similarity=0.114 Sum_probs=121.0
Q ss_pred cCCCeEEEecCCeEEEEecCCC-CceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEe-------cCc
Q 011924 140 TSKHDVYLMSHFSVIHWSSLTS-SRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGG-------FQG 209 (475)
Q Consensus 140 ~~~~~v~~~~~~~v~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~-------~dg 209 (475)
.+.+.|-+.....|+||+.... ...++++... .+...+|..... +.++++..| -.|
T Consensus 115 is~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~--------------~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G 180 (365)
T 2xzh_A 115 ISLNTVALVTDNAVYHWSMEGESQPVKMFDRHS--------------SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG 180 (365)
T ss_dssp CSSSEEEEEESSEEEEEESSTTCCCEEEEECCG--------------GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred cCCCeEEEEcCCcEEEEcccCCCCCceeeecch--------------hcccceEEEEEECCCCCEEEEEeEeccCCccce
Confidence 5667788899999999987542 2244444322 223567888877 566666544 238
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeC---CCeEEEEECCCC-eeeeeee-ccccEEeccC
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN---DCGVRDFDMGKY-QLSKHFR-FPWPVNVSSS 284 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~---dg~v~iwd~~~~-~~~~~~~-~~~~v~~s~~ 284 (475)
.+.+|+.+... .+...+|.+.-..+.+.-.+....+++.+.. .+.+++.++... .-...|. ..-.+.|.|.
T Consensus 181 ~mQLYS~er~~----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe 256 (365)
T 2xzh_A 181 AMQLYSVDRKV----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 256 (365)
T ss_dssp EEEEEETTTTE----EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT
T ss_pred eEEEEeecccc----cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc
Confidence 88899987533 2445555433322222101111223443332 257888887332 0000110 0000111110
Q ss_pred CceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEE
Q 011924 285 YCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT 364 (475)
Q Consensus 285 ~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t 364 (475)
. ...-++ ++.+|+.-..+...+.-|.+++||+.+|.++..-+-..+.|+..+-+....-++.
T Consensus 257 a-----------~~DFPV-------amqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~ 318 (365)
T 2xzh_A 257 A-----------QNDFPV-------AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIG 318 (365)
T ss_dssp C-----------TTCCEE-------EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEE
T ss_pred c-----------cCCceE-------EEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEE
Confidence 0 000000 7889998889999999999999999999999877777788888887776666777
Q ss_pred EeCCCeEEEEECCC
Q 011924 365 GNQDKTCRIWDLRN 378 (475)
Q Consensus 365 ~s~dg~v~iwd~~~ 378 (475)
.+..|.|.--.+..
T Consensus 319 Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 319 VNRKGQVLSVCVEE 332 (365)
T ss_dssp EETTCEEEEEEECT
T ss_pred EcCCCEEEEEEECc
Confidence 77888877666643
No 299
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.68 E-value=0.029 Score=53.56 Aligned_cols=140 Identities=19% Similarity=0.240 Sum_probs=80.3
Q ss_pred eEEECCCCcEEEEEeCC-------------CcEEEEECCCCc---------eEEEeecCCCCeEEEEEec-CCCEEEEEe
Q 011924 310 HSSQSPDGKLLIIVGDN-------------PDGLLVDSMTGK---------TIASLCGHLDFSFASAWHP-NGVTFATGN 366 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~d-------------g~i~iwd~~~~~---------~~~~l~~h~~~v~~~~~sp-~g~~l~t~s 366 (475)
.++|.|+|.+.++.+.. +.|.-++.. |+ ....-.++. ....++|+| +++++++-.
T Consensus 139 ~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 139 RIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp CEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEEC
T ss_pred eEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEec
Confidence 78999999877775432 455555543 32 111122343 356799999 677665543
Q ss_pred CCC---eEEEEECCC---------------CCceEEEEecCCCceEEEEE-------ccCCCEEEEEcCCCeEEEEECCC
Q 011924 367 QDK---TCRIWDLRN---------------LSESVAVLKGNLGAIRSIRY-------TSDGRYMATAEPADFVHVYDVKS 421 (475)
Q Consensus 367 ~dg---~v~iwd~~~---------------~~~~~~~~~~~~~~v~~l~~-------spdg~~la~~~~dg~i~iwd~~~ 421 (475)
... .|.+...-. ...++..+.....+...++| ..+|+++++.-..+.|...++..
T Consensus 217 g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 217 GPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp CSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred CCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 322 233322100 01234444222346778888 35787777777778899999875
Q ss_pred C-eeE--EEEe-ccCCCeEEEEEcCCCCeEEEEEe
Q 011924 422 G-YEK--EQEI-DFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 422 ~-~~~--~~~~-~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
. ... ..+. ...+.+.++++.|||. |+++.+
T Consensus 297 ~g~~~~~~~~~~~~~~rp~~v~~~pDG~-lyv~~~ 330 (354)
T 3a9g_A 297 NMEVRKISTFFKNVFGRLRDVVIDDDGG-ILISTS 330 (354)
T ss_dssp GGCEEEEEEECTTTSCCEEEEEECTTSC-EEEEEC
T ss_pred CCcccceeeeccCCCCCeeEEEECCCCc-EEEEEe
Confidence 3 222 2222 2246799999999995 455444
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.66 E-value=0.032 Score=52.09 Aligned_cols=193 Identities=11% Similarity=0.119 Sum_probs=115.4
Q ss_pred EEEEc---CcEEEEEecCceEEEEeCCCCCceEEEeeecC----CCC--ceeEEEEE-eCCCCCeEEEEEe---------
Q 011924 194 TLAVK---DKLLVAGGFQGELICKHLDRPGVSFCSRTTYD----DNA--ITNAVEIY-GSPSGAVHFTASN--------- 254 (475)
Q Consensus 194 ~l~~~---~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~----~~~--~v~~l~~~-~s~~g~~~l~s~s--------- 254 (475)
+..|+ +.++++.-..|+|..|+....... .. ...+ ... .+..|.+. ..|.+. ++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~-~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~~~g 93 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHF-NV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFNFAD 93 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEE-EE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTCTTS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEE-EE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccccccccc
Confidence 56673 444444447999999998644332 12 2222 122 23555551 026655 355433
Q ss_pred ----CCCeEEEEECC---CCeeeeeeecc--------------ccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEE
Q 011924 255 ----NDCGVRDFDMG---KYQLSKHFRFP--------------WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQ 313 (475)
Q Consensus 255 ----~dg~v~iwd~~---~~~~~~~~~~~--------------~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~ 313 (475)
.+..|..||+. +++.+...... ...+ .+++
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~n-----------------------------Dvav 144 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVV-----------------------------QSAQ 144 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEE-----------------------------EEEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCc-----------------------------eeEE
Confidence 26789999998 77776655421 1244 8999
Q ss_pred CCCCcEEEEEeCC-CcEEEEECCCCceEEEeec------CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEE
Q 011924 314 SPDGKLLIIVGDN-PDGLLVDSMTGKTIASLCG------HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 386 (475)
Q Consensus 314 sp~g~~l~~~~~d-g~i~iwd~~~~~~~~~l~~------h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~ 386 (475)
.++|+..++++.. +.|..++.. |+.+..+.. .......++++|+|++|++....+.+..+|+..+......+
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~ 223 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPV 223 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEEC
T ss_pred CCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecc
Confidence 9999999998888 888877764 443333321 11235689999999999988779999999997532201112
Q ss_pred e--cC---CCceEEE-EEccCCCE-EEEEcCCCeEEEEEC
Q 011924 387 K--GN---LGAIRSI-RYTSDGRY-MATAEPADFVHVYDV 419 (475)
Q Consensus 387 ~--~~---~~~v~~l-~~spdg~~-la~~~~dg~i~iwd~ 419 (475)
. +. ......+ .--.+|+. |++....+.+.+.+.
T Consensus 224 ~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 224 KINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSW 263 (334)
T ss_dssp EESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECS
T ss_pred cccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECC
Confidence 1 21 1123343 33347887 445555666666553
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.66 E-value=0.019 Score=59.30 Aligned_cols=210 Identities=9% Similarity=0.000 Sum_probs=116.2
Q ss_pred cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeee-eeec-cccEEeccC
Q 011924 207 FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSK-HFRF-PWPVNVSSS 284 (475)
Q Consensus 207 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~-~~~v~~s~~ 284 (475)
....|+..++....... ......-....+|++ ++.+..++++-...+.|..+++....... .+.. .....
T Consensus 16 ~~~~I~~i~~~~~~~~~--~~~~~~~~~~~~ld~--~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~---- 87 (619)
T 3s94_A 16 NRRDLRLVDATNGKENA--TIVVGGLEDAAAVDF--VFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD---- 87 (619)
T ss_dssp CSSBEEEECCC-----------CBCCSCEEEEEE--ETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE----
T ss_pred ccccEEEEeCCCCcceE--EEEEcCCCceEEEEE--EeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC----
Confidence 35667777776432111 112222334567777 87777667776667888888886543211 2221 13344
Q ss_pred CceEEEEEEeecccceEEEEeeeeeeEEECCCCcEE-EEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEE
Q 011924 285 YCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLL-IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFA 363 (475)
Q Consensus 285 ~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l-~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~ 363 (475)
.+++.+.+..| ++-...+.|.+.++........+.........++++|.+.+|+
T Consensus 88 -------------------------GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly 142 (619)
T 3s94_A 88 -------------------------GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY 142 (619)
T ss_dssp -------------------------EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEE
T ss_pred -------------------------eEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEE
Confidence 88999955544 4445678899999864433333334556678999999755555
Q ss_pred EEeC--CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEE-cCCCeEEEEECCCCeeEEEEeccCCCeEEEEE
Q 011924 364 TGNQ--DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVKSGYEKEQEIDFFGEISGISF 440 (475)
Q Consensus 364 t~s~--dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~f 440 (475)
.... .+.|...++.. ................++++++++.|+.+ ...+.|..+|+.................+|++
T Consensus 143 ~tD~g~~~~I~r~~~dG-~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~ 221 (619)
T 3s94_A 143 WTDWGEVPKIERAGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL 221 (619)
T ss_dssp EEECSSSCEEEEEETTS-CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEE
T ss_pred EeccCCCCEEEEEECCC-CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEE
Confidence 5543 45677777743 22222333344567899999976666655 44678999998654333222212234456777
Q ss_pred cCCCCeEEEEEe
Q 011924 441 SPDTESLFIGVW 452 (475)
Q Consensus 441 spdg~~l~~~~~ 452 (475)
..+ .|+.+-|
T Consensus 222 ~~~--~ly~td~ 231 (619)
T 3s94_A 222 FED--ILYWTDW 231 (619)
T ss_dssp SSS--EEEEECT
T ss_pred eCC--EEEEecC
Confidence 655 6665543
No 302
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.65 E-value=0.026 Score=54.47 Aligned_cols=203 Identities=15% Similarity=0.109 Sum_probs=123.7
Q ss_pred cCCCeEEEecCCeEEEEecCCC-CceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEe-------cCc
Q 011924 140 TSKHDVYLMSHFSVIHWSSLTS-SRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGG-------FQG 209 (475)
Q Consensus 140 ~~~~~v~~~~~~~v~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~-------~dg 209 (475)
.+.+.|-+..+..|+||+.... ...++++..+ .+.+.+|..... +.++++..| -.|
T Consensus 114 is~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~--------------~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G 179 (494)
T 1bpo_A 114 ISLNTVALVTDNAVYHWSMEGESQPVKMFDRHS--------------SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG 179 (494)
T ss_dssp EETTEEEEECSSEEEEEESSSSCCCEEEEECCG--------------GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEE
T ss_pred cCCCeEEEEcCCeeEEecccCCCCchhheecch--------------hcccceEEEEEECCCCCeEEEEeecccCCcccc
Confidence 4566788899999999997542 2244444322 223467888777 667766443 248
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC---CeEEEEECCCC-eeeeeeec-cccEEeccC
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND---CGVRDFDMGKY-QLSKHFRF-PWPVNVSSS 284 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d---g~v~iwd~~~~-~~~~~~~~-~~~v~~s~~ 284 (475)
.+.+|+++.... +...+|.+.-..+.+.-.+....+++.+... +.++|.++... .....|.. .-.+.|.|.
T Consensus 180 ~mQLYS~er~~s----Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe 255 (494)
T 1bpo_A 180 AMQLYSVDRKVS----QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 255 (494)
T ss_dssp EEEEEESTTCCE----EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTT
T ss_pred eEEEeecccccc----chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcc
Confidence 889999876442 4455665444333331111112234444433 67888887432 00001100 000111110
Q ss_pred CceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEE
Q 011924 285 YCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT 364 (475)
Q Consensus 285 ~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t 364 (475)
. ...-++ ++.+|+.-..+...+.-|.+++||+.+|.++..-+-..+.|+..+-+....-++.
T Consensus 256 ~-----------~~DFPv-------amqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~ 317 (494)
T 1bpo_A 256 A-----------QNDFPV-------AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIG 317 (494)
T ss_dssp S-----------TTCCEE-------EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEE
T ss_pred c-----------ccCcee-------EEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEE
Confidence 0 000000 7889998889999999999999999999998877777788888888777777788
Q ss_pred EeCCCeEEEEECCC
Q 011924 365 GNQDKTCRIWDLRN 378 (475)
Q Consensus 365 ~s~dg~v~iwd~~~ 378 (475)
.+..|.|.--.+..
T Consensus 318 Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 318 VNRKGQVLSVCVEE 331 (494)
T ss_dssp EETTCEEEEEEECT
T ss_pred EccCceEEEEEEcc
Confidence 88888877666643
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.60 E-value=0.0048 Score=59.40 Aligned_cols=142 Identities=18% Similarity=0.260 Sum_probs=94.5
Q ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccc-----cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCC
Q 011924 243 SPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW-----PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDG 317 (475)
Q Consensus 243 s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-----~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g 317 (475)
+.+|.. ++.+ .++.||.-++.....-+.+..+. .+. .+..||+|
T Consensus 29 ~~n~t~-i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~-----------------------------qlvlSpsG 77 (452)
T 3pbp_A 29 SQNGTR-IVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTF-----------------------------HVISSTSG 77 (452)
T ss_dssp ETTTTE-EEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTC-----------------------------EEEECTTS
T ss_pred EcCCCE-EEEE-ECCEEEEEECCCCCcceEEecCcccccCcee-----------------------------EEEECCCC
Confidence 456665 4443 45788888886443344444332 344 78999999
Q ss_pred cEEEEEeCCCcEEEEECCCCc------------eEEEeec------CCCCeEEEEEec---CCCEEEEEeCCCeEEEEEC
Q 011924 318 KLLIIVGDNPDGLLVDSMTGK------------TIASLCG------HLDFSFASAWHP---NGVTFATGNQDKTCRIWDL 376 (475)
Q Consensus 318 ~~l~~~~~dg~i~iwd~~~~~------------~~~~l~~------h~~~v~~~~~sp---~g~~l~t~s~dg~v~iwd~ 376 (475)
++||..+.. .|.|..+..+. ....+.- ...+|..+.||| .+..|++-..|++||+||+
T Consensus 78 ~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl 156 (452)
T 3pbp_A 78 DLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDI 156 (452)
T ss_dssp SEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEET
T ss_pred CEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEc
Confidence 999998664 68888876331 1122321 256799999999 5678999999999999999
Q ss_pred CCC-CceEEEEec---------CCCceEEEEEccCCCEEEE--EcCCCeEEEE
Q 011924 377 RNL-SESVAVLKG---------NLGAIRSIRYTSDGRYMAT--AEPADFVHVY 417 (475)
Q Consensus 377 ~~~-~~~~~~~~~---------~~~~v~~l~~spdg~~la~--~~~dg~i~iw 417 (475)
... ..+. .+.. ....|.+++|.++|-.|.. .+..|-|+-.
T Consensus 157 ~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 157 LNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 752 2333 3331 1246889999998865555 4477776554
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.60 E-value=0.036 Score=52.67 Aligned_cols=140 Identities=17% Similarity=0.139 Sum_probs=84.3
Q ss_pred eEEECC--CCc-EEEEE-eC--CCcEEEEECCCC-c---eEEEeecC-CCCeEEEEEecCCCEEEEEeC-----------
Q 011924 310 HSSQSP--DGK-LLIIV-GD--NPDGLLVDSMTG-K---TIASLCGH-LDFSFASAWHPNGVTFATGNQ----------- 367 (475)
Q Consensus 310 ~~~~sp--~g~-~l~~~-~~--dg~i~iwd~~~~-~---~~~~l~~h-~~~v~~~~~sp~g~~l~t~s~----------- 367 (475)
.+.+.+ +|. +|+++ .. +..+.+|++..+ . .+..+.+. -.....+++.|+|++.++...
T Consensus 116 Gi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e 195 (355)
T 3sre_A 116 GISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWE 195 (355)
T ss_dssp EEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHH
T ss_pred eeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccch
Confidence 455533 443 34443 33 456777776543 2 22334432 245789999999987777541
Q ss_pred ------CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc-CCCeEEEEECCC-CeeE-EEEeccCCCeEEE
Q 011924 368 ------DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKS-GYEK-EQEIDFFGEISGI 438 (475)
Q Consensus 368 ------dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~-~dg~i~iwd~~~-~~~~-~~~~~~~~~i~~l 438 (475)
.|.|.-+|. ++ +..+.......+.++|||||+.|+.+. ..+.|+.|++.. +... .......+..-++
T Consensus 196 ~~~~~~~g~vyr~d~---~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi 271 (355)
T 3sre_A 196 MHLGLAWSFVTYYSP---ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNI 271 (355)
T ss_dssp HHTTCCCEEEEEECT---TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEE
T ss_pred hhccCCccEEEEEEC---Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceE
Confidence 234444444 33 223333334568999999998887765 568999999863 3221 1122345778899
Q ss_pred EEcC-CCCeEEEEEec
Q 011924 439 SFSP-DTESLFIGVWD 453 (475)
Q Consensus 439 ~fsp-dg~~l~~~~~D 453 (475)
++.+ +|++.+++.++
T Consensus 272 ~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 272 SVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EECTTTCCEEEEEESC
T ss_pred EEeCCCCcEEEEecCC
Confidence 9999 59877766554
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.57 E-value=0.053 Score=50.96 Aligned_cols=136 Identities=13% Similarity=0.135 Sum_probs=80.6
Q ss_pred eEEECCCCcEEEEEeCCCcEEEEECCCCceEEEe-ecCCCCeEEEEEecCCCEEEEEeCCCeEEEEEC-CCCCceEEEEe
Q 011924 310 HSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL-CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL-RNLSESVAVLK 387 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l-~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~-~~~~~~~~~~~ 387 (475)
.+.+.+++..++++ .++.|+. ....|+....+ .++...+.++++.|++.+++.+...+..+-+|- -...+.+. .
T Consensus 126 ~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~ 201 (327)
T 2xbg_A 126 LIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--R 201 (327)
T ss_dssp EEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--C
T ss_pred EEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--C
Confidence 66666667666655 4554432 22345544433 345567899999999988887765555555553 11123331 2
Q ss_pred cCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEe-c---cCCCeEEEEEcCCCCeEEEE
Q 011924 388 GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI-D---FFGEISGISFSPDTESLFIG 450 (475)
Q Consensus 388 ~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~-~---~~~~i~~l~fspdg~~l~~~ 450 (475)
.....+..+++.|++++++.+ .+|.+++.+...|..-..+. . ....+.++++.|++..++++
T Consensus 202 ~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g 267 (327)
T 2xbg_A 202 TTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG 267 (327)
T ss_dssp CSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE
T ss_pred CCCCccceeEECCCCCEEEEe-CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe
Confidence 344578899999999876554 57777776433233222221 1 12358899999887766654
No 306
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.56 E-value=0.011 Score=58.64 Aligned_cols=152 Identities=13% Similarity=0.143 Sum_probs=95.2
Q ss_pred eeEEEEEeCC-CCCeEEEEEeCCCeEEEEECCCCeeeeeeecc----ccEEeccCCceEEEEEEeecccceEEEEeeeee
Q 011924 235 TNAVEIYGSP-SGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP----WPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQ 309 (475)
Q Consensus 235 v~~l~~~~s~-~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~----~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~ 309 (475)
...|++ .| ++..++++....+.|++.|+..+.+....... ....
T Consensus 141 p~~la~--dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~----------------------------- 189 (496)
T 3kya_A 141 NGRLAF--DPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIR----------------------------- 189 (496)
T ss_dssp EEEEEE--ETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEE-----------------------------
T ss_pred CCEEEE--ccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCc-----------------------------
Confidence 467777 88 35555666555577999999887766544321 1244
Q ss_pred eEEE-------CCCCcEEEEEeCCC-------cEEEEECCC-CceE-----EEeecCCCCeEEEEEec-CCCEEEEEeCC
Q 011924 310 HSSQ-------SPDGKLLIIVGDNP-------DGLLVDSMT-GKTI-----ASLCGHLDFSFASAWHP-NGVTFATGNQD 368 (475)
Q Consensus 310 ~~~~-------sp~g~~l~~~~~dg-------~i~iwd~~~-~~~~-----~~l~~h~~~v~~~~~sp-~g~~l~t~s~d 368 (475)
.++| +++|+.|+++...+ .+.+++... |... ..+... .....++++| ++.++++-..+
T Consensus 190 ~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~ 268 (496)
T 3kya_A 190 SIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEK 268 (496)
T ss_dssp EEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTT
T ss_pred EEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCC
Confidence 8899 99999776665543 266676433 2221 223221 2345778999 55666666678
Q ss_pred CeEEEEECC-------CCCce-----------EEE-Ee-cCCCceEEEEEccCCCEEEEE-cCCCeEEEEEC
Q 011924 369 KTCRIWDLR-------NLSES-----------VAV-LK-GNLGAIRSIRYTSDGRYMATA-EPADFVHVYDV 419 (475)
Q Consensus 369 g~v~iwd~~-------~~~~~-----------~~~-~~-~~~~~v~~l~~spdg~~la~~-~~dg~i~iwd~ 419 (475)
+.|..+|+. + +.. ... +. +.....+.++|+|+|++|+.+ +..+.|+.++.
T Consensus 269 g~V~r~d~~~~~~~~~t-g~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 269 GQVFRLDLVDYFKTIKN-GGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TEEEEECHHHHHHHHHT-TCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CEEEEEecccccccccC-ceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 899999986 3 221 112 22 223346799999999965554 55678998654
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.47 E-value=0.00036 Score=73.36 Aligned_cols=206 Identities=9% Similarity=-0.059 Sum_probs=115.0
Q ss_pred CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC----Ceeeeeee-ccccEEec
Q 011924 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK----YQLSKHFR-FPWPVNVS 282 (475)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~----~~~~~~~~-~~~~v~~s 282 (475)
.+.|+..++...... .+... ...+..|+| .+.+..++++-...+.|+.+++.+ ......+. ......
T Consensus 385 ~~~I~~id~~~~~~~---~~~~~-~~~p~gla~--d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-- 456 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYT---SLIPN-LRNVVALDT--EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-- 456 (699)
T ss_dssp TTC-CEECTTSCCEE---CCSCC-CTTCCCCEE--ETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC--
T ss_pred ccceEEEeCCCCcce---eeecc-CcceEEEcc--ccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc--
Confidence 356777776654322 22222 233556777 776666566666678899998865 11111111 111122
Q ss_pred cCCceEEEEEEeecccceEEEEeeeeeeEEECCC-CcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCE
Q 011924 283 SSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVT 361 (475)
Q Consensus 283 ~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~ 361 (475)
.+++.+. ++++++-...+.|.++++........+.........++++|.+.+
T Consensus 457 ---------------------------glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ 509 (699)
T 1n7d_A 457 ---------------------------GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGF 509 (699)
T ss_dssp ---------------------------CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSC
T ss_pred ---------------------------eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCc
Confidence 6788864 444454456678999998654433333333345678999996555
Q ss_pred EEEEeC-C-CeEEEEECCCCCceEEEE-ecCCCceEEEEEccCCCEE-EEEcCCCeEEEEECCCCeeEEEEec---cCCC
Q 011924 362 FATGNQ-D-KTCRIWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYM-ATAEPADFVHVYDVKSGYEKEQEID---FFGE 434 (475)
Q Consensus 362 l~t~s~-d-g~v~iwd~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l-a~~~~dg~i~iwd~~~~~~~~~~~~---~~~~ 434 (475)
|+.+.. . +.|.++++.. .....+ .........|+|+|++..| ++-+..+.|.++++.... ...+.. ....
T Consensus 510 ly~td~~~~~~I~~~~~dG--~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~ 586 (699)
T 1n7d_A 510 MYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAH 586 (699)
T ss_dssp CEECCCSSSCCEEBCCSSS--CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSS
T ss_pred EEEcccCCCCeEEEEeCCC--CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCC
Confidence 554433 2 6788887753 222222 2223456789999976544 444566789999986433 333332 1234
Q ss_pred eEEEEEcCCCCeEEEEEec
Q 011924 435 ISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 435 i~~l~fspdg~~l~~~~~D 453 (475)
..+|++..+ .|+.+.+.
T Consensus 587 P~glavd~~--~lywtd~~ 603 (699)
T 1n7d_A 587 PFSLAVFED--KVFWTDII 603 (699)
T ss_dssp CCCCEEETT--EEEEECST
T ss_pred ceEeEEECC--EEEEEeCC
Confidence 556666543 56655443
No 308
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.43 E-value=0.078 Score=49.25 Aligned_cols=237 Identities=8% Similarity=0.037 Sum_probs=131.1
Q ss_pred EecCCCeEEEec---CCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecC------
Q 011924 138 WATSKHDVYLMS---HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQ------ 208 (475)
Q Consensus 138 ~~~~~~~v~~~~---~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~d------ 208 (475)
++.+...||+.. +..++..+.......++.+ ..+.-+.+++++|+-....
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~---------------------~~~~~i~~~g~~Iyy~~~~~~~~~~ 79 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN---------------------DTAMYINADKNYVYYVRNNNQKITS 79 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEEE---------------------EEEEEEEECSSEEEEEEECC-----
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEccC---------------------CceeeEEEcCCEEEEEECCCCcccc
Confidence 556677788764 4666666654333333321 2345666778877766543
Q ss_pred --------ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEE---eCCCeEEEEECCCCeeeeeeeccc
Q 011924 209 --------GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTAS---NNDCGVRDFDMGKYQLSKHFRFPW 277 (475)
Q Consensus 209 --------g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~---s~dg~v~iwd~~~~~~~~~~~~~~ 277 (475)
..|+..+++..... .+... . +..+ ++.++.++.+. .....|...++..... ..+....
T Consensus 80 ~~~~~~n~~~Iy~i~~dg~~~~---~l~~~---~--~~~~--s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~ 148 (302)
T 3s25_A 80 QTFFSYDRNSLCRIKRNGHGST---VLDPD---P--CIYA--SLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHY 148 (302)
T ss_dssp -CCSSCCSEEEEEEETTSCCCE---EEECS---C--EEEE--EEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEESSC
T ss_pred cceeccCCCeEEEEeCCCCcce---EeecC---C--ccEE--EEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeCCC
Confidence 46666666655432 22111 1 1244 67888755554 2334555556654332 2222111
Q ss_pred cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC-CCcEEEEECCCCceEEEeecCCCCeEEEEEe
Q 011924 278 PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD-NPDGLLVDSMTGKTIASLCGHLDFSFASAWH 356 (475)
Q Consensus 278 ~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~-dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~s 356 (475)
. . +++|+++.|...+. ...|...++..+.....+. +... ..++
T Consensus 149 ~-~-------------------------------~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~ 192 (302)
T 3s25_A 149 L-F-------------------------------TCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVV 192 (302)
T ss_dssp C-C-------------------------------CSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEE
T ss_pred c-e-------------------------------EeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceee
Confidence 1 2 35677888876655 5788888876555443333 2232 3466
Q ss_pred cCCCEEEEEeCCC--eEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEc--CCCeEEEEECCCCeeEEEEeccC
Q 011924 357 PNGVTFATGNQDK--TCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE--PADFVHVYDVKSGYEKEQEIDFF 432 (475)
Q Consensus 357 p~g~~l~t~s~dg--~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~--~dg~i~iwd~~~~~~~~~~~~~~ 432 (475)
|++.+|+-....+ .|..-++. +.....+... .+ ..|+|+|++|+.+. ..+.|..-++... ....+..
T Consensus 193 P~g~~iy~t~~~~~~~I~~~~ld--G~~~~~Lt~~--~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~-~r~~l~~-- 263 (302)
T 3s25_A 193 LDDTNVYYMDVNRDNAIVHVNIN--NPNPVVLTEA--NI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT-GFKELAK-- 263 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEECSS--SCCCEECSCS--CE--EEEEEETTEEEEEECSSSCEEEEEETTSC-CCEEEEE--
T ss_pred ecCCEEEEEEcCCCcEEEEEECC--CCCeEEEeCC--Cc--ceEEECCCEEEEEECCCCcEEEEEECCCC-ccEEeeC--
Confidence 9888888776543 55555664 3334444432 33 44888999888663 2467777776543 3333322
Q ss_pred CCeEEEEEcCCCCeEEEEEec
Q 011924 433 GEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 433 ~~i~~l~fspdg~~l~~~~~D 453 (475)
+.+. .+++.+.+|+-.-+.
T Consensus 264 ~~~~--~i~i~~d~Iy~td~~ 282 (302)
T 3s25_A 264 GEFC--NINVTSQYVYFTDFV 282 (302)
T ss_dssp SCEE--EEEECSSEEEEEETT
T ss_pred Cccc--eEEEeCCEEEEEECC
Confidence 2333 456677788877654
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.35 E-value=0.011 Score=54.70 Aligned_cols=217 Identities=10% Similarity=0.047 Sum_probs=108.4
Q ss_pred EcCcEEEEEe-cC-----ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC-----CeEEEEECC
Q 011924 197 VKDKLLVAGG-FQ-----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVRDFDMG 265 (475)
Q Consensus 197 ~~~~~lvsg~-~d-----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d-----g~v~iwd~~ 265 (475)
+++.+++.|| .+ ..+.++|+.+....... ..........++.+ ++. +++.|+.+ ..+.+||+.
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~----~~~-l~v~GG~~~~~~~~~~~~~d~~ 86 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLP-SITRKRRYVASVSL----HDR-IYVIGGYDGRSRLSSVECLDYT 86 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE----TTE-EEEECCBCSSCBCCCEEEEETT
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCC-CCChhhccccEEEE----CCE-EEEEcCCCCCccCceEEEEECC
Confidence 3667788887 33 36788887765433211 11111111122222 444 56666644 358888987
Q ss_pred CCe---eeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC-----CcEEEEECCCC
Q 011924 266 KYQ---LSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN-----PDGLLVDSMTG 337 (475)
Q Consensus 266 ~~~---~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d-----g~i~iwd~~~~ 337 (475)
+.+ ....-..+.+... ..+...++++++.|+.+ ..+.+||+.+.
T Consensus 87 ~~~~~~W~~~~~~p~~r~~----------------------------~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 87 ADEDGVWYSVAPMNVRRGL----------------------------AGATTLGDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp CCTTCCCEEECCCSSCCBS----------------------------CEEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCCCCeeEECCCCCCCccc----------------------------eeEEEECCEEEEEcccCCCcccceEEEEcCCCC
Confidence 765 3222111111110 11112267777777643 36889998876
Q ss_pred ceEE--EeecCCCCeEEEEEecCCCEEEEEeCC-----CeEEEEECCCCCceEEEEec---CCCceEEEEEccCCCEEEE
Q 011924 338 KTIA--SLCGHLDFSFASAWHPNGVTFATGNQD-----KTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMAT 407 (475)
Q Consensus 338 ~~~~--~l~~h~~~v~~~~~sp~g~~l~t~s~d-----g~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~spdg~~la~ 407 (475)
+-.. .+........++. -++++++.|+.+ ..+.+||+.+ .+ -..+.. .......+. -++++++.
T Consensus 139 ~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~i~v~ 212 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHT-GH-WTNVTPMATKRSGAGVAL--LNDHIYVV 212 (301)
T ss_dssp EEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTT-TE-EEEECCCSSCCBSCEEEE--ETTEEEEE
T ss_pred eEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCC-Cc-EEeCCCCCcccccceEEE--ECCEEEEE
Confidence 5322 2221111112222 267777777654 3588999865 32 222221 111112222 25777777
Q ss_pred EcCC-----CeEEEEECCCCeeEEEEeccCC--CeEEEEEcCCCCeEEEEEecCC
Q 011924 408 AEPA-----DFVHVYDVKSGYEKEQEIDFFG--EISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 408 ~~~d-----g~i~iwd~~~~~~~~~~~~~~~--~i~~l~fspdg~~l~~~~~D~~ 455 (475)
|+.+ ..|.+||+.+..-......... ....+.+ +++.++.|+.++.
T Consensus 213 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 265 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGN 265 (301)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred eCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCC
Confidence 7754 4699999988754332111111 1222222 6677777776643
No 310
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.24 E-value=0.13 Score=47.75 Aligned_cols=218 Identities=11% Similarity=0.075 Sum_probs=132.1
Q ss_pred cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEe----c
Q 011924 207 FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNV----S 282 (475)
Q Consensus 207 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~----s 282 (475)
...+|.+.|+..+........ .. .+.-+ +|..+. ++.-. ..++.+||+++.+.+..+..+.+|.| +
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi-~A-----dsAIM--nP~~~V-iALra-g~~LQiFnletK~klks~~~~e~VvfWkWis 116 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPI-SA-----DSAIM--NPASKV-IALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 116 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEEC-CC-----SEEEE--CSSSSE-EEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred CCCEEEEEECCCCCCcccccc-cc-----ceeee--CCCccE-EEEec-CCeEEEechHHhhhhcceecCCccEEEEecC
Confidence 344788899987664421111 11 12223 888875 44433 68899999999999998887777773 2
Q ss_pred cCCceEE---EEEEeecccc-eEEEEee--------eeeeEEECCCCcEEEEEeC-------CCcEEEEECCCCceEEEe
Q 011924 283 SSYCIIL---LCRLLNFMTE-KVIICLL--------CLQHSSQSPDGKLLIIVGD-------NPDGLLVDSMTGKTIASL 343 (475)
Q Consensus 283 ~~~~~l~---~~~v~d~~~~-~~~~~~~--------~i~~~~~sp~g~~l~~~~~-------dg~i~iwd~~~~~~~~~l 343 (475)
+..-.+. .+..|++... .+.+... -|.....+++.++++..|- .|.+.+|..+ .+.-+.+
T Consensus 117 ~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~i 195 (365)
T 2xzh_A 117 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPI 195 (365)
T ss_dssp SSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEE
T ss_pred CCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec-cccccee
Confidence 2222221 5678877642 2222222 3457778899998876642 3677889875 4456678
Q ss_pred ecCCCCeEEEEEe--c-CCCEEEEEeC---CCeEEEEECCCC--Cc------eEEEEecC---CCceEEEEEccCCCEEE
Q 011924 344 CGHLDFSFASAWH--P-NGVTFATGNQ---DKTCRIWDLRNL--SE------SVAVLKGN---LGAIRSIRYTSDGRYMA 406 (475)
Q Consensus 344 ~~h~~~v~~~~~s--p-~g~~l~t~s~---dg~v~iwd~~~~--~~------~~~~~~~~---~~~v~~l~~spdg~~la 406 (475)
+||...-..+... + ..++|+.+.. .+.++|-++... +. .+..+-.. .+-.-++..|+.-..+.
T Consensus 196 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviy 275 (365)
T 2xzh_A 196 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 275 (365)
T ss_dssp CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEE
Confidence 8886533222221 1 1224444433 258999998542 11 11111111 22334788888777888
Q ss_pred EEcCCCeEEEEECCCCeeEEEEeccCCCe
Q 011924 407 TAEPADFVHVYDVKSGYEKEQEIDFFGEI 435 (475)
Q Consensus 407 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i 435 (475)
.-+.-|.|++||+.+|.++..-.-....|
T Consensus 276 viTK~G~ihlyDleTgt~i~~nrIS~d~i 304 (365)
T 2xzh_A 276 LITKYGYIHLYDLETGTCIYMNRISGETI 304 (365)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred EEeCCcEEEEEEcccCcEEEEeccCCCce
Confidence 88999999999999999887655433333
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.21 E-value=0.02 Score=53.00 Aligned_cols=219 Identities=13% Similarity=0.066 Sum_probs=106.7
Q ss_pred EcCcEEEEEecC----ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC-----CeEEEEECCCC
Q 011924 197 VKDKLLVAGGFQ----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVRDFDMGKY 267 (475)
Q Consensus 197 ~~~~~lvsg~~d----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d-----g~v~iwd~~~~ 267 (475)
+++.+++.||.+ ..+.++|+........ .........-.++.+ ++. +++.|+.+ ..+.+||..+.
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~----~~~-lyv~GG~~~~~~~~~~~~~d~~~~ 87 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQV-AELPSRRCRAGMVYM----AGL-VFAVGGFNGSLRVRTVDSYDPVKD 87 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEE----TTE-EEEESCBCSSSBCCCEEEEETTTT
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEc-ccCCcccccceEEEE----CCE-EEEEeCcCCCccccceEEECCCCC
Confidence 356677788764 4577888776543321 111111111112222 444 56776544 35788888776
Q ss_pred eeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCC-----cEEEEECCCCceEEE
Q 011924 268 QLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNP-----DGLLVDSMTGKTIAS 342 (475)
Q Consensus 268 ~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg-----~i~iwd~~~~~~~~~ 342 (475)
+....-..+.+...+ +++ ..++++++.|+.++ .+.+||+.+.+-. .
T Consensus 88 ~W~~~~~~p~~r~~~---------------------------~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~ 138 (302)
T 2xn4_A 88 QWTSVANMRDRRSTL---------------------------GAA-VLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-H 138 (302)
T ss_dssp EEEEECCCSSCCBSC---------------------------EEE-EETTEEEEEEEECSSCEEEEEEEEETTTTEEE-E
T ss_pred ceeeCCCCCccccce---------------------------EEE-EECCEEEEEcCCCCCccCceEEEEeCCCCeEe-e
Confidence 544322211111100 112 22677888887543 5778898766532 2
Q ss_pred eecCC--CCeEEEEEecCCCEEEEEeCC-------CeEEEEECCCCCceEEEEe---cCCCceEEEEEccCCCEEEEEcC
Q 011924 343 LCGHL--DFSFASAWHPNGVTFATGNQD-------KTCRIWDLRNLSESVAVLK---GNLGAIRSIRYTSDGRYMATAEP 410 (475)
Q Consensus 343 l~~h~--~~v~~~~~sp~g~~l~t~s~d-------g~v~iwd~~~~~~~~~~~~---~~~~~v~~l~~spdg~~la~~~~ 410 (475)
+.... ..-.+++. -++++++.|+.+ ..+.+||+.+ .+ -..+. ........+. -++++++.|+.
T Consensus 139 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~ 213 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATT-NE-WTYIAEMSTRRSGAGVGV--LNNLLYAVGGH 213 (302)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTT-TE-EEEECCCSSCCBSCEEEE--ETTEEEEECCB
T ss_pred cCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCC-Cc-EEECCCCccccccccEEE--ECCEEEEECCC
Confidence 22111 11112222 266777776542 3588899865 32 22221 1111122222 26777777765
Q ss_pred C-----CeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEecCC
Q 011924 411 A-----DFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 455 (475)
Q Consensus 411 d-----g~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~D~~ 455 (475)
+ ..+.+||+.+..-..............+..-+++.++.|+.++.
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~ 263 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGS 263 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCC
Confidence 4 46999999876533221111111111112226677777776653
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.21 E-value=0.075 Score=49.06 Aligned_cols=189 Identities=12% Similarity=0.094 Sum_probs=97.4
Q ss_pred EEcCcEEEEEecCc-----eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCC-----eEEEEECC
Q 011924 196 AVKDKLLVAGGFQG-----ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC-----GVRDFDMG 265 (475)
Q Consensus 196 ~~~~~~lvsg~~dg-----~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg-----~v~iwd~~ 265 (475)
..++.+++.||.++ .+.++|..+........ .........++.+ ++. +++.|+.++ .+.+||+.
T Consensus 59 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~----~~~-iyv~GG~~~~~~~~~~~~~d~~ 132 (302)
T 2xn4_A 59 YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN-MRDRRSTLGAAVL----NGL-LYAVGGFDGSTGLSSVEAYNIK 132 (302)
T ss_dssp EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE----TTE-EEEEEEECSSCEEEEEEEEETT
T ss_pred EECCEEEEEeCcCCCccccceEEECCCCCceeeCCC-CCccccceEEEEE----CCE-EEEEcCCCCCccCceEEEEeCC
Confidence 34888888988653 57788877655432211 1111111122222 444 466665443 46778887
Q ss_pred CCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC-------CCcEEEEECCCCc
Q 011924 266 KYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD-------NPDGLLVDSMTGK 338 (475)
Q Consensus 266 ~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~-------dg~i~iwd~~~~~ 338 (475)
+.+....-..+.+...+ +++ .-++++++.|+. -..+.+||+.+.+
T Consensus 133 ~~~W~~~~~~p~~r~~~---------------------------~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 133 SNEWFHVAPMNTRRSSV---------------------------GVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TTEEEEECCCSSCCBSC---------------------------EEE-EETTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CCeEeecCCCCCcccCc---------------------------eEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 76544332222111100 112 226677777764 2458899988765
Q ss_pred eEEE--eecCCCCeEEEEEecCCCEEEEEeCC-----CeEEEEECCCCCceEEEEecC---CCceEEEEEccCCCEEEEE
Q 011924 339 TIAS--LCGHLDFSFASAWHPNGVTFATGNQD-----KTCRIWDLRNLSESVAVLKGN---LGAIRSIRYTSDGRYMATA 408 (475)
Q Consensus 339 ~~~~--l~~h~~~v~~~~~sp~g~~l~t~s~d-----g~v~iwd~~~~~~~~~~~~~~---~~~v~~l~~spdg~~la~~ 408 (475)
-... +........++. -++++++.|+.+ ..+.+||+.+ .+ -..+... ......+ .-++++++.|
T Consensus 185 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~-W~~~~~~~~~r~~~~~~--~~~~~i~v~G 258 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTT-NA-WRQVADMNMCRRNAGVC--AVNGLLYVVG 258 (302)
T ss_dssp EEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTT-TE-EEEECCCSSCCBSCEEE--EETTEEEEEC
T ss_pred EEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCC-CC-EeeCCCCCCccccCeEE--EECCEEEEEC
Confidence 3221 111111112222 267777887754 3688999865 32 2222211 1111122 2367777787
Q ss_pred cCC-----CeEEEEECCCCee
Q 011924 409 EPA-----DFVHVYDVKSGYE 424 (475)
Q Consensus 409 ~~d-----g~i~iwd~~~~~~ 424 (475)
+.+ ..|.+||+.+..-
T Consensus 259 G~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp CBCSSSBCCCEEEEETTTTEE
T ss_pred CcCCCcccccEEEEcCCCCeE
Confidence 755 3589999987643
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.15 E-value=0.18 Score=47.85 Aligned_cols=149 Identities=17% Similarity=0.139 Sum_probs=84.0
Q ss_pred eEEECCCCcEEEEEeCC-------------CcEEEEECCCCc------------eEEEe-ecCCCCeEEEEEec-CCCEE
Q 011924 310 HSSQSPDGKLLIIVGDN-------------PDGLLVDSMTGK------------TIASL-CGHLDFSFASAWHP-NGVTF 362 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~d-------------g~i~iwd~~~~~------------~~~~l-~~h~~~v~~~~~sp-~g~~l 362 (475)
.++|.|+|.+.++.+.. +.|.-++....- ....+ .++ .....++|+| +|+++
T Consensus 134 ~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~ 212 (353)
T 2g8s_A 134 RLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALW 212 (353)
T ss_dssp CEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEE
T ss_pred cEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEE
Confidence 78999999777766542 456666654210 11112 233 3467899999 66655
Q ss_pred EEEeC-CCeEEEEECCCC------------------------------CceEEEEecCCCceEEEEEcc-------CCCE
Q 011924 363 ATGNQ-DKTCRIWDLRNL------------------------------SESVAVLKGNLGAIRSIRYTS-------DGRY 404 (475)
Q Consensus 363 ~t~s~-dg~v~iwd~~~~------------------------------~~~~~~~~~~~~~v~~l~~sp-------dg~~ 404 (475)
++-.. ++.=.|.-+... ..++..+..+ .++..++|.+ +|++
T Consensus 213 ~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l 291 (353)
T 2g8s_A 213 LNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKL 291 (353)
T ss_dssp EEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEE
T ss_pred EEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcE
Confidence 54332 211122211110 1123333333 3567888863 5777
Q ss_pred EEEEcCCCeEEEEECCCCeeEEEE--e-ccCCCeEEEEEcCCCCeEEEEEecCCcceEEEE
Q 011924 405 MATAEPADFVHVYDVKSGYEKEQE--I-DFFGEISGISFSPDTESLFIGVWDRTYGSLLEY 462 (475)
Q Consensus 405 la~~~~dg~i~iwd~~~~~~~~~~--~-~~~~~i~~l~fspdg~~l~~~~~D~~~~~ll~~ 462 (475)
+++.-..+.|...++..+...... . ...+.+.++++.|||...++. |..-+.++..
T Consensus 292 ~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t--d~~~g~I~ri 350 (353)
T 2g8s_A 292 FIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT--DESSGELLKV 350 (353)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE--CSTTEEEEEE
T ss_pred EEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE--eCCCCEEEEE
Confidence 777777788988888766433222 1 234589999999999855443 2233455443
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.15 E-value=0.075 Score=49.46 Aligned_cols=212 Identities=12% Similarity=0.062 Sum_probs=104.9
Q ss_pred EEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeC-----C------CeEEEEECCCCee
Q 011924 201 LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN-----D------CGVRDFDMGKYQL 269 (475)
Q Consensus 201 ~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~-----d------g~v~iwd~~~~~~ 269 (475)
+++.|+ ..+.+||..+..... ...........+-.. ..++. +++.|+. . ..+.+||..+.+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~--~~~~~p~~r~~~~~~--~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC--ASLSSQVPKNHVSLV--TKENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE--EECCCCSCSSEEEEE--CTTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEEcC--CceEEECCCCCeEec--CCCCCCCCccceEEE--EECCE-EEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 555666 578899988766442 221111112222222 34555 4666652 1 1267788877665
Q ss_pred eeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC--------CcEEEEECCCCceEE
Q 011924 270 SKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN--------PDGLLVDSMTGKTIA 341 (475)
Q Consensus 270 ~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d--------g~i~iwd~~~~~~~~ 341 (475)
...-..+.+...+ +++. -++++++.|+.+ ..+.+||+.+.+- .
T Consensus 80 ~~~~~~p~~r~~~---------------------------~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~ 130 (315)
T 4asc_A 80 LGMPPLPSPRCLF---------------------------GLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-G 130 (315)
T ss_dssp EECCCBSSCEESC---------------------------EEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEE-E
T ss_pred EECCCCCcchhce---------------------------eEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcE-e
Confidence 3322222221100 1111 266777777632 4588999887642 2
Q ss_pred EeecC-CCCeEEEEEecCCCEEEEEeC-C-----CeEEEEECCCCCceEEEEec---CCCceEEEEEccCCCEEEEEcCC
Q 011924 342 SLCGH-LDFSFASAWHPNGVTFATGNQ-D-----KTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPA 411 (475)
Q Consensus 342 ~l~~h-~~~v~~~~~sp~g~~l~t~s~-d-----g~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~spdg~~la~~~~d 411 (475)
.+..- .......+..-++++++.|+. + ..+.+||..+ .+ -..+.. .......+. -++++++.|+.+
T Consensus 131 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 206 (315)
T 4asc_A 131 ESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK-FE-WKELAPMQTARSLFGATV--HDGRIIVAAGVT 206 (315)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTT-TE-EEECCCCSSCCBSCEEEE--ETTEEEEEEEEC
T ss_pred ECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCC-Ce-EEECCCCCCchhceEEEE--ECCEEEEEeccC
Confidence 22211 111111122246677777765 2 3688999865 22 122221 111112222 267777777754
Q ss_pred C-----eEEEEECCCCeeEEEEeccC--CCeEEEEEcCCCCeEEEEEecC
Q 011924 412 D-----FVHVYDVKSGYEKEQEIDFF--GEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 412 g-----~i~iwd~~~~~~~~~~~~~~--~~i~~l~fspdg~~l~~~~~D~ 454 (475)
+ .+.+||+.+..-........ .....+.+ +++.++.|+.++
T Consensus 207 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~ 254 (315)
T 4asc_A 207 DTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFAT 254 (315)
T ss_dssp SSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEE
T ss_pred CCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccc
Confidence 3 58999998875433221111 11222222 667777787653
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.14 E-value=0.043 Score=50.67 Aligned_cols=190 Identities=14% Similarity=0.138 Sum_probs=100.0
Q ss_pred EEEcCcEEEEEecC-----ceEEEEeCCCCC---ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC-----CeEEE
Q 011924 195 LAVKDKLLVAGGFQ-----GELICKHLDRPG---VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVRD 261 (475)
Q Consensus 195 l~~~~~~lvsg~~d-----g~i~vw~~~~~~---~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d-----g~v~i 261 (475)
...++.+++.||.+ ..+.++|+.+.. ...... .........++.+ ++. +++.|+.+ ..+.+
T Consensus 59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~-~p~~r~~~~~~~~----~~~-lyv~GG~~~~~~~~~~~~ 132 (301)
T 2vpj_A 59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAP-MNVRRGLAGATTL----GDM-IYVSGGFDGSRRHTSMER 132 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECC-CSSCCBSCEEEEE----TTE-EEEECCBCSSCBCCEEEE
T ss_pred EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCC-CCCCccceeEEEE----CCE-EEEEcccCCCcccceEEE
Confidence 34588888888865 468888987766 432211 1111111122222 444 46666543 35788
Q ss_pred EECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC-----CcEEEEECCC
Q 011924 262 FDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN-----PDGLLVDSMT 336 (475)
Q Consensus 262 wd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d-----g~i~iwd~~~ 336 (475)
||+.+.+....-..+.+... +.+...++++++.|+.+ ..+.+||+.+
T Consensus 133 ~d~~~~~W~~~~~~p~~r~~----------------------------~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 133 YDPNIDQWSMLGDMQTAREG----------------------------AGLVVASGVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp EETTTTEEEEEEECSSCCBS----------------------------CEEEEETTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EcCCCCeEEECCCCCCCccc----------------------------ceEEEECCEEEEECCCCCCcccceEEEEeCCC
Confidence 88877665433222211110 11122267777887654 4688999887
Q ss_pred CceEEEeecC-CCCeEEEEEecCCCEEEEEeCC-----CeEEEEECCCCCceEEEEec---CCCceEEEEEccCCCEEEE
Q 011924 337 GKTIASLCGH-LDFSFASAWHPNGVTFATGNQD-----KTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMAT 407 (475)
Q Consensus 337 ~~~~~~l~~h-~~~v~~~~~sp~g~~l~t~s~d-----g~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~spdg~~la~ 407 (475)
.+-. .+... .......+..-++++++.|+.+ ..+.+||+.+ .+ -..+.. .......+. -++++++.
T Consensus 185 ~~W~-~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~i~v~ 259 (301)
T 2vpj_A 185 GHWT-NVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRT-DS-WTTVTSMTTPRCYVGATV--LRGRLYAI 259 (301)
T ss_dssp TEEE-EECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT-TE-EEEECCCSSCCBSCEEEE--ETTEEEEE
T ss_pred CcEE-eCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCC-Cc-EEECCCCCCcccceeEEE--ECCEEEEE
Confidence 6533 22211 1111111122267777777764 4689999965 33 222221 111112222 26777777
Q ss_pred EcCC-----CeEEEEECCCCe
Q 011924 408 AEPA-----DFVHVYDVKSGY 423 (475)
Q Consensus 408 ~~~d-----g~i~iwd~~~~~ 423 (475)
|+.+ ..|.+||+.+..
T Consensus 260 GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 260 AGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CCBCSSSBEEEEEEEETTTTE
T ss_pred cCcCCCcccccEEEEcCCCCe
Confidence 7755 468889988764
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.14 E-value=0.048 Score=50.51 Aligned_cols=214 Identities=11% Similarity=0.027 Sum_probs=107.2
Q ss_pred CcEEEEEecC--ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC----CeEEEEECCCCeeeee
Q 011924 199 DKLLVAGGFQ--GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRDFDMGKYQLSKH 272 (475)
Q Consensus 199 ~~~lvsg~~d--g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d----g~v~iwd~~~~~~~~~ 272 (475)
+.+++.||.+ ..+.++|........... .........++.+ ++. +++.|+.+ ..+.+||+.+.+....
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~----~~~-lyv~GG~~~~~~~~~~~~d~~~~~W~~~ 85 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRC-PFEKRRDAACVFW----DNV-VYILGGSQLFPIKRMDCYNVVKDSWYSK 85 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCC-CSCCCBSCEEEEE----TTE-EEEECCBSSSBCCEEEEEETTTTEEEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCC-CCcccceeEEEEE----CCE-EEEEeCCCCCCcceEEEEeCCCCeEEEC
Confidence 3466677653 567888877655332111 1111111122222 444 57777644 5688888887665433
Q ss_pred eeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC------CcEEEEECCCCceEEEeec-
Q 011924 273 FRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN------PDGLLVDSMTGKTIASLCG- 345 (475)
Q Consensus 273 ~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d------g~i~iwd~~~~~~~~~l~~- 345 (475)
-..+.+... ..+..-++++++.|+.+ ..+.+||+.+.+-.. +..
T Consensus 86 ~~~p~~r~~----------------------------~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~ 136 (306)
T 3ii7_A 86 LGPPTPRDS----------------------------LAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT-KPSM 136 (306)
T ss_dssp ECCSSCCBS----------------------------CEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE-ECCC
T ss_pred CCCCccccc----------------------------eeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe-CCCC
Confidence 222211110 11122267788887754 468899988765322 221
Q ss_pred CCCCe-EEEEEecCCCEEEEEeC---------CCeEEEEECCCCCceEEEEec---CCCceEEEEEccCCCEEEEEcCC-
Q 011924 346 HLDFS-FASAWHPNGVTFATGNQ---------DKTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPA- 411 (475)
Q Consensus 346 h~~~v-~~~~~sp~g~~l~t~s~---------dg~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~spdg~~la~~~~d- 411 (475)
..... .+++ .-++++++.|+. -..+.+||..+ .+ -..+.. .......+.+ ++++++.|+.+
T Consensus 137 p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 211 (306)
T 3ii7_A 137 LTQRCSHGMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT-ET-WTELCPMIEARKNHGLVFV--KDKIFAVGGQNG 211 (306)
T ss_dssp SSCCBSCEEE-EETTEEEEECCEESCTTTCEECCCEEEEETTT-TE-EEEECCCSSCCBSCEEEEE--TTEEEEECCEET
T ss_pred cCCcceeEEE-EECCEEEEECCCCCCCCcccccceEEEeCCCC-Ce-EEECCCccchhhcceEEEE--CCEEEEEeCCCC
Confidence 11111 1222 236677777653 24588999865 32 222221 1111122222 67777777643
Q ss_pred ----CeEEEEECCCCeeEEEEec--cCCCeEEEEEcCCCCeEEEEEecC
Q 011924 412 ----DFVHVYDVKSGYEKEQEID--FFGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 412 ----g~i~iwd~~~~~~~~~~~~--~~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
..+.+||+.+..-...-.. .......+.+ +++.++.|+.++
T Consensus 212 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 258 (306)
T 3ii7_A 212 LGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQG 258 (306)
T ss_dssp TEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCS
T ss_pred CCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCC
Confidence 4689999987643222111 1112233333 667777777654
No 317
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.10 E-value=0.013 Score=56.01 Aligned_cols=138 Identities=17% Similarity=0.101 Sum_probs=78.6
Q ss_pred eEEECCCCcEEEEEeCCCcEEEEECCCCce--EEEee---cCCCCeEEEEEecC---CCEEEEEeC-C-----CeEEEEE
Q 011924 310 HSSQSPDGKLLIIVGDNPDGLLVDSMTGKT--IASLC---GHLDFSFASAWHPN---GVTFATGNQ-D-----KTCRIWD 375 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~--~~~l~---~h~~~v~~~~~sp~---g~~l~t~s~-d-----g~v~iwd 375 (475)
.++|.|+|+++++ ...+.|++++ .++. +..+. ........++|+|+ +..|+.+.. . ..|..|+
T Consensus 35 ~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~ 111 (352)
T 2ism_A 35 ALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLR 111 (352)
T ss_dssp EEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEE
T ss_pred EEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEE
Confidence 7899999985554 5668999998 4442 22221 12356889999998 555554433 2 5688888
Q ss_pred CCCCCc------eEEEEe---cCCCceEEEEEccCCCEEEEEcC-------------CCeEEEEECCCC-----------
Q 011924 376 LRNLSE------SVAVLK---GNLGAIRSIRYTSDGRYMATAEP-------------ADFVHVYDVKSG----------- 422 (475)
Q Consensus 376 ~~~~~~------~~~~~~---~~~~~v~~l~~spdg~~la~~~~-------------dg~i~iwd~~~~----------- 422 (475)
... .. .+..+. ........++|.|||.+.++.+. .+.|.-++....
T Consensus 112 ~~~-~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~ 190 (352)
T 2ism_A 112 HLG-ERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRR 190 (352)
T ss_dssp ECS-SCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCT
T ss_pred eCC-CCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCC
Confidence 753 21 111233 11123468999999976555332 245666665420
Q ss_pred -eeEEEEeccCCCeEEEEEcCCCCeEEEEE
Q 011924 423 -YEKEQEIDFFGEISGISFSPDTESLFIGV 451 (475)
Q Consensus 423 -~~~~~~~~~~~~i~~l~fspdg~~l~~~~ 451 (475)
.....+..-.....+++|+|+...|+++-
T Consensus 191 ~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 191 GARPEVYSLGHRNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp TSCTTEEEECCSEECCCEECTTTCCEEEEE
T ss_pred CCCccEEEEcCCCcccEEEECCCCCEEEEE
Confidence 01111111123477899999444455553
No 318
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.09 E-value=0.22 Score=49.51 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=66.7
Q ss_pred CCeEEEEEecCCCEEEEEeC-CCeEEEEECCCC-----------Cce-EEEEecCCCceEEEEEccCCCEEEEEcCCCeE
Q 011924 348 DFSFASAWHPNGVTFATGNQ-DKTCRIWDLRNL-----------SES-VAVLKGNLGAIRSIRYTSDGRYMATAEPADFV 414 (475)
Q Consensus 348 ~~v~~~~~sp~g~~l~t~s~-dg~v~iwd~~~~-----------~~~-~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i 414 (475)
.....+..+|||++++.++. +.+|.|+|++.. ... +..... .......+|.++|.-..+.--|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceE
Confidence 34456889999999998875 789999998731 111 223332 2355689999999555566679999
Q ss_pred EEEECCCC------e---eEEEEeccCCCeEEEEE------cCCCCeEEEE
Q 011924 415 HVYDVKSG------Y---EKEQEIDFFGEISGISF------SPDTESLFIG 450 (475)
Q Consensus 415 ~iwd~~~~------~---~~~~~~~~~~~i~~l~f------spdg~~l~~~ 450 (475)
.-|++... . .+..-..-.-.+-.+.- .|||++|++.
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 99998753 1 22222222233434433 6789999887
No 319
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.06 E-value=0.032 Score=48.70 Aligned_cols=134 Identities=13% Similarity=0.059 Sum_probs=79.8
Q ss_pred eEEECCCCcEEEEEeCCCcEEEEECCCCce------EEEee--cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCc
Q 011924 310 HSSQSPDGKLLIIVGDNPDGLLVDSMTGKT------IASLC--GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE 381 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~------~~~l~--~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~ 381 (475)
.++|+|+|.+.++ .+|.++-.+..+... -..+- +... -.++.|.|+|.+.++ .||.|.-++--+.+.
T Consensus 45 ~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~ 119 (236)
T 1tl2_A 45 FLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDT 119 (236)
T ss_dssp EEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTT
T ss_pred eEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCC
Confidence 8999999997777 677777766644221 11111 1111 467899999987777 568887776532111
Q ss_pred ------eEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCee-----EEEEec--cCCCeEEEEEcCCCCeEE
Q 011924 382 ------SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE-----KEQEID--FFGEISGISFSPDTESLF 448 (475)
Q Consensus 382 ------~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~-----~~~~~~--~~~~i~~l~fspdg~~l~ 448 (475)
....-...-..+..|.|.|+|.+.++. ++.++-....++.. ...... ....-.-+.|+|+|...+
T Consensus 120 ~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~ 197 (236)
T 1tl2_A 120 DNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFG 197 (236)
T ss_dssp CCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEE
T ss_pred CceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEE
Confidence 122222223467899999999877766 77654333222110 111212 222445577999998777
Q ss_pred EE
Q 011924 449 IG 450 (475)
Q Consensus 449 ~~ 450 (475)
+.
T Consensus 198 v~ 199 (236)
T 1tl2_A 198 VQ 199 (236)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.05 E-value=0.044 Score=52.76 Aligned_cols=135 Identities=14% Similarity=0.139 Sum_probs=90.9
Q ss_pred CCCcEEEEEeCCCcEEEEECCCCceEEEeecC----CCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCC---c------
Q 011924 315 PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGH----LDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS---E------ 381 (475)
Q Consensus 315 p~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h----~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~---~------ 381 (475)
.+|..++++ .++.||..++..+...+.+... -..+..+..+|+|++||..+. .+|.|-.+-... .
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 455555554 3467888887755445555532 225788999999999998855 578888875211 0
Q ss_pred --eEEEEec------CCCceEEEEEccC---CCEEEEEcCCCeEEEEECCCCee-EEEEec---------cCCCeEEEEE
Q 011924 382 --SVAVLKG------NLGAIRSIRYTSD---GRYMATAEPADFVHVYDVKSGYE-KEQEID---------FFGEISGISF 440 (475)
Q Consensus 382 --~~~~~~~------~~~~v~~l~~spd---g~~la~~~~dg~i~iwd~~~~~~-~~~~~~---------~~~~i~~l~f 440 (475)
..+.+.- ...+|..+.|+|- |..|++-..|+.|++||+..... ...+.. ....|.+++|
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEE
Confidence 1223332 2467999999994 46899999999999999986321 111211 1146889999
Q ss_pred cCCCCeEEEEE
Q 011924 441 SPDTESLFIGV 451 (475)
Q Consensus 441 spdg~~l~~~~ 451 (475)
.++|-.|.+.+
T Consensus 188 g~~~lTLYvl~ 198 (452)
T 3pbp_A 188 SKDGLTLYCLN 198 (452)
T ss_dssp CTTSSCEEEEE
T ss_pred cCCCcEEEEEe
Confidence 99988888866
No 321
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.04 E-value=0.02 Score=54.71 Aligned_cols=140 Identities=16% Similarity=0.093 Sum_probs=78.7
Q ss_pred eEEECCCCcEEEEEeCCCcEEEEECCCCc-eEEEee---cCCCCeEEEEEecC---CCEEEEEeC----C----CeEEEE
Q 011924 310 HSSQSPDGKLLIIVGDNPDGLLVDSMTGK-TIASLC---GHLDFSFASAWHPN---GVTFATGNQ----D----KTCRIW 374 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~dg~i~iwd~~~~~-~~~~l~---~h~~~v~~~~~sp~---g~~l~t~s~----d----g~v~iw 374 (475)
.++|.|+|++++ +...+.|++++ .+++ .+..+. ........++++|+ +..|+.+.. + ..|..|
T Consensus 33 ~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~ 110 (354)
T 3a9g_A 33 SIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRG 110 (354)
T ss_dssp EEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEE
T ss_pred EEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEE
Confidence 789999998555 45669999997 4554 222221 12356889999997 444544432 3 567777
Q ss_pred ECCCCC------ce-EEEEec-CCCceEEEEEccCCCEEEEEcC-------------CCeEEEEECCCCe--------eE
Q 011924 375 DLRNLS------ES-VAVLKG-NLGAIRSIRYTSDGRYMATAEP-------------ADFVHVYDVKSGY--------EK 425 (475)
Q Consensus 375 d~~~~~------~~-~~~~~~-~~~~v~~l~~spdg~~la~~~~-------------dg~i~iwd~~~~~--------~~ 425 (475)
+..... +. +..+.. .......++|.|||++.++.+. .+.|.-++.. +. ..
T Consensus 111 ~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~npf~~~ 189 (354)
T 3a9g_A 111 RLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNPFPNS 189 (354)
T ss_dssp EECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSSSTTC
T ss_pred EECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCCCCCC
Confidence 765321 11 111221 1113467999999986665432 2456666643 22 01
Q ss_pred EEEeccCCCeEEEEEcCCCCeEEEEEe
Q 011924 426 EQEIDFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 426 ~~~~~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
..+..-.....+++|+|+...|+++-.
T Consensus 190 ~i~a~G~rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 190 PIWSYGHRNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp CEEEECCSCCCEEEECTTTCCEEEEEC
T ss_pred cEEEEccCCcceEEEeCCCCCEEEEec
Confidence 111112245678999994444555533
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.98 E-value=0.054 Score=53.54 Aligned_cols=100 Identities=12% Similarity=0.084 Sum_probs=58.5
Q ss_pred eEEECCCCcEEEEEeCCCcEEEEECCCCceE--EEeec------CCCCeEEEEEecC---CCEEEEEeC-----------
Q 011924 310 HSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI--ASLCG------HLDFSFASAWHPN---GVTFATGNQ----------- 367 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~--~~l~~------h~~~v~~~~~sp~---g~~l~t~s~----------- 367 (475)
.|+|.|+|+++++-...+.|++++..+++.. ..+.. .......++|+|+ +..|+.+..
T Consensus 31 ~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~ 110 (454)
T 1cru_A 31 ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKEL 110 (454)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCS
T ss_pred EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcccc
Confidence 8899999997776544457888886556542 22221 2356779999995 445544432
Q ss_pred --CCeEEEEECCCCC----c--eEE-EEec-CCCceEEEEEccCCCEEEEEc
Q 011924 368 --DKTCRIWDLRNLS----E--SVA-VLKG-NLGAIRSIRYTSDGRYMATAE 409 (475)
Q Consensus 368 --dg~v~iwd~~~~~----~--~~~-~~~~-~~~~v~~l~~spdg~~la~~~ 409 (475)
...|.-|+..... . .+. .+.. .......|+|.|||++.++.+
T Consensus 111 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 111 PNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2345555543211 1 111 1221 123467999999998666543
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.98 E-value=0.11 Score=48.41 Aligned_cols=106 Identities=11% Similarity=0.068 Sum_probs=57.2
Q ss_pred CCCcEEEEEeC------CCcEEEEECCCCceEEEeecC-CCCeEEEEEecCCCEEEEEeCCC-----eEEEEECCCCCce
Q 011924 315 PDGKLLIIVGD------NPDGLLVDSMTGKTIASLCGH-LDFSFASAWHPNGVTFATGNQDK-----TCRIWDLRNLSES 382 (475)
Q Consensus 315 p~g~~l~~~~~------dg~i~iwd~~~~~~~~~l~~h-~~~v~~~~~sp~g~~l~t~s~dg-----~v~iwd~~~~~~~ 382 (475)
.++++++.|+. -..+.+||+.+.+-. .+..- .......+..-++++++.|+.++ .+.+||+.+ .+
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~- 223 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWK-ELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD-NK- 223 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT-TE-
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEE-ECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCC-Ce-
Confidence 46777788775 246889998876432 22211 11111111222677888887654 588899865 32
Q ss_pred EEEEec---CCCceEEEEEccCCCEEEEEcCC--------------CeEEEEECCCCeeE
Q 011924 383 VAVLKG---NLGAIRSIRYTSDGRYMATAEPA--------------DFVHVYDVKSGYEK 425 (475)
Q Consensus 383 ~~~~~~---~~~~v~~l~~spdg~~la~~~~d--------------g~i~iwd~~~~~~~ 425 (475)
-..+.. .......+. -++++++.|+.+ ..|.+||+.+.+-.
T Consensus 224 W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 224 WAPFEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp EEEECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred EEECCCCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 222221 111122222 256777777653 24788898876433
No 324
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.93 E-value=0.32 Score=46.95 Aligned_cols=218 Identities=11% Similarity=0.076 Sum_probs=133.0
Q ss_pred cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEe----c
Q 011924 207 FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNV----S 282 (475)
Q Consensus 207 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~----s 282 (475)
...+|.+.|+..+........ .. .+.-+ +|..+. ++.- ...++.+||+++.+.+..+..+.+|.| +
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi-~A-----dsAIM--nP~~~i-iALr-ag~~lQiFnle~K~klks~~~~e~VvfWkWis 115 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPI-SA-----DSAIM--NPASKV-IALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 115 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEEC-CC-----SEEEE--CSSSSC-EEEE-ETTEEEEEETTTTEEEEEEECSSCCCEEEEEE
T ss_pred CCCeEEEEECCCCCcceeccc-cc-----ceeee--CCCCcE-EEEe-cCCeEEEEchHHhhhhcceecCCCceEEEecC
Confidence 344888899987664421111 11 12234 888875 4443 278999999999999888887666662 2
Q ss_pred cCCceEE---EEEEeecccc-eEEEEee--------eeeeEEECCCCcEEEEEeC-------CCcEEEEECCCCceEEEe
Q 011924 283 SSYCIIL---LCRLLNFMTE-KVIICLL--------CLQHSSQSPDGKLLIIVGD-------NPDGLLVDSMTGKTIASL 343 (475)
Q Consensus 283 ~~~~~l~---~~~v~d~~~~-~~~~~~~--------~i~~~~~sp~g~~l~~~~~-------dg~i~iwd~~~~~~~~~l 343 (475)
+..-.+. .+..|++... .+.+... -|.....+++.++++..|- .|.+.+|..+. +.-+.+
T Consensus 116 ~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~i 194 (494)
T 1bpo_A 116 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPI 194 (494)
T ss_dssp TTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEE
T ss_pred CCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchh
Confidence 2222221 5678887542 2222222 3457778899999886542 36778998754 446678
Q ss_pred ecCCCCeEEEEEec---CCCEEEEEeCC---CeEEEEECCCC--Cc------eEEEEec---CCCceEEEEEccCCCEEE
Q 011924 344 CGHLDFSFASAWHP---NGVTFATGNQD---KTCRIWDLRNL--SE------SVAVLKG---NLGAIRSIRYTSDGRYMA 406 (475)
Q Consensus 344 ~~h~~~v~~~~~sp---~g~~l~t~s~d---g~v~iwd~~~~--~~------~~~~~~~---~~~~v~~l~~spdg~~la 406 (475)
+||...-..+...- ...+|+.+... +.++|-++... +. .+..+-. ...-..++..|+.-..+.
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence 88865443333211 11355555443 68999998542 11 1111111 122334788888878888
Q ss_pred EEcCCCeEEEEECCCCeeEEEEeccCCCe
Q 011924 407 TAEPADFVHVYDVKSGYEKEQEIDFFGEI 435 (475)
Q Consensus 407 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i 435 (475)
.-+.-|.|++||+.++.++..-.-....|
T Consensus 275 viTK~G~i~lyDleTgt~i~~nrIs~~~i 303 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMNRISGETI 303 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred EEecCceEEEEecccceeeeeecccCCce
Confidence 88999999999999999877655333333
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.89 E-value=0.021 Score=53.22 Aligned_cols=218 Identities=12% Similarity=0.037 Sum_probs=107.7
Q ss_pred EEEEcCcEEEEEecC----ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeC----C-----CeEE
Q 011924 194 TLAVKDKLLVAGGFQ----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN----D-----CGVR 260 (475)
Q Consensus 194 ~l~~~~~~lvsg~~d----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~----d-----g~v~ 260 (475)
++..++.+++.||.. ..+.++|.......... ......... ++.. .++. +++.|+. + ..+.
T Consensus 20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~-~~~~---~~~~-lyv~GG~~~~~~~~~~~~~~~ 93 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLA-DLQVPRSGL-AGCV---VGGL-LYAVGGRNNSPDGNTDSSALD 93 (308)
T ss_dssp -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECC-CCSSCCBSC-EEEE---ETTE-EEEECCEEEETTEEEECCCEE
T ss_pred ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECC-CCCcccccc-eEEE---ECCE-EEEECCCcCCCCCCeecceEE
Confidence 444478888888853 36778887665433211 111111111 2222 1444 4666654 2 3577
Q ss_pred EEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC-----CcEEEEECC
Q 011924 261 DFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN-----PDGLLVDSM 335 (475)
Q Consensus 261 iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d-----g~i~iwd~~ 335 (475)
+||+.+.+....-..+.+... . +++. -++++++.|+.+ ..+.+||+.
T Consensus 94 ~~d~~~~~W~~~~~~p~~r~~--------------------------~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 94 CYNPMTNQWSPCAPMSVPRNR--------------------------I-GVGV-IDGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp EEETTTTEEEECCCCSSCCBT--------------------------C-EEEE-ETTEEEEECCEETTEECCCEEEEETT
T ss_pred EECCCCCeEeECCCCCcCccc--------------------------c-EEEE-ECCEEEEEcCCCCCcccccEEEECCC
Confidence 888877654332221111110 0 1121 267777777643 468889987
Q ss_pred CCceEEEeec---CCCCeEEEEEecCCCEEEEEeCC-----CeEEEEECCCCCceEEEEec---CCCceEEEEEccCCCE
Q 011924 336 TGKTIASLCG---HLDFSFASAWHPNGVTFATGNQD-----KTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRY 404 (475)
Q Consensus 336 ~~~~~~~l~~---h~~~v~~~~~sp~g~~l~t~s~d-----g~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~spdg~~ 404 (475)
+.+-. .+.. ......++.+ ++++++.|+.+ ..+.+||+.+ .+ -..+.. .......+.+ ++++
T Consensus 146 ~~~W~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~--~~~i 218 (308)
T 1zgk_A 146 RDEWH-LVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPER-NE-WRMITAMNTIRSGAGVCVL--HNCI 218 (308)
T ss_dssp TTEEE-ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTT-TE-EEECCCCSSCCBSCEEEEE--TTEE
T ss_pred CCeEe-ECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCC-Ce-EeeCCCCCCccccceEEEE--CCEE
Confidence 66532 2211 1111122222 67777777654 3588899865 22 222211 1111222333 6777
Q ss_pred EEEEcCC-----CeEEEEECCCCeeEEEEeccC--CCeEEEEEcCCCCeEEEEEecC
Q 011924 405 MATAEPA-----DFVHVYDVKSGYEKEQEIDFF--GEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 405 la~~~~d-----g~i~iwd~~~~~~~~~~~~~~--~~i~~l~fspdg~~l~~~~~D~ 454 (475)
++.|+.+ ..+.+||+.+..-........ .....+.+ +++.++.|+.++
T Consensus 219 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 273 (308)
T 1zgk_A 219 YAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDG 273 (308)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCC
Confidence 7777654 469999998765332211111 11222222 667777777665
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.87 E-value=0.13 Score=47.52 Aligned_cols=190 Identities=12% Similarity=0.115 Sum_probs=100.8
Q ss_pred EEEcCcEEEEEecC----ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC------CeEEEEEC
Q 011924 195 LAVKDKLLVAGGFQ----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND------CGVRDFDM 264 (475)
Q Consensus 195 l~~~~~~lvsg~~d----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d------g~v~iwd~ 264 (475)
...++.+++.||.+ ..+.++|+.+......... ........++.+ ++. +++.|+.+ ..+.+||.
T Consensus 52 ~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~~~----~~~-iyv~GG~~~~~~~~~~~~~~d~ 125 (306)
T 3ii7_A 52 VFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP-PTPRDSLAACAA----EGK-IYTSGGSEVGNSALYLFECYDT 125 (306)
T ss_dssp EEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC-SSCCBSCEEEEE----TTE-EEEECCBBTTBSCCCCEEEEET
T ss_pred EEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC-CccccceeEEEE----CCE-EEEECCCCCCCcEeeeEEEEeC
Confidence 34588888898865 6788888876654422221 111111122222 444 56666654 45888898
Q ss_pred CCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC---------CCcEEEEECC
Q 011924 265 GKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD---------NPDGLLVDSM 335 (475)
Q Consensus 265 ~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~---------dg~i~iwd~~ 335 (475)
.+.+....-..+.+... +.+...++++++.|+. -..+.+||+.
T Consensus 126 ~~~~W~~~~~~p~~r~~----------------------------~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~ 177 (306)
T 3ii7_A 126 RTESWHTKPSMLTQRCS----------------------------HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPA 177 (306)
T ss_dssp TTTEEEEECCCSSCCBS----------------------------CEEEEETTEEEEECCEESCTTTCEECCCEEEEETT
T ss_pred CCCceEeCCCCcCCcce----------------------------eEEEEECCEEEEECCCCCCCCcccccceEEEeCCC
Confidence 87665433222211110 1112236677777753 3458899988
Q ss_pred CCceEEEeecCC-CC-eEEEEEecCCCEEEEEeCC-----CeEEEEECCCCCceEEEEe---cCCCceEEEEEccCCCEE
Q 011924 336 TGKTIASLCGHL-DF-SFASAWHPNGVTFATGNQD-----KTCRIWDLRNLSESVAVLK---GNLGAIRSIRYTSDGRYM 405 (475)
Q Consensus 336 ~~~~~~~l~~h~-~~-v~~~~~sp~g~~l~t~s~d-----g~v~iwd~~~~~~~~~~~~---~~~~~v~~l~~spdg~~l 405 (475)
+.+-. .+.... .. -.+++. -++++++.|+.+ ..+.+||+.+ .+ -..+. ........+.+ +++++
T Consensus 178 ~~~W~-~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~--~~~i~ 251 (306)
T 3ii7_A 178 TETWT-ELCPMIEARKNHGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKL-NE-WKMVSPMPWKGVTVKCAAV--GSIVY 251 (306)
T ss_dssp TTEEE-EECCCSSCCBSCEEEE-ETTEEEEECCEETTEEBCCEEEEETTT-TE-EEECCCCSCCBSCCEEEEE--TTEEE
T ss_pred CCeEE-ECCCccchhhcceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCC-Cc-EEECCCCCCCccceeEEEE--CCEEE
Confidence 77532 232111 11 112222 266777777643 3588999865 22 22221 11112223333 67788
Q ss_pred EEEcCC-----CeEEEEECCCCee
Q 011924 406 ATAEPA-----DFVHVYDVKSGYE 424 (475)
Q Consensus 406 a~~~~d-----g~i~iwd~~~~~~ 424 (475)
+.|+.+ ..+.+||+.+.+-
T Consensus 252 v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp EEECBCSSSBCCEEEEEETTTTEE
T ss_pred EEeCcCCCeeeeeEEEEcCCCCeE
Confidence 888744 5689999987643
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.87 E-value=0.059 Score=50.97 Aligned_cols=159 Identities=13% Similarity=0.103 Sum_probs=86.9
Q ss_pred eEEECCCCcEEEEEeCCCcEEEEECCCCceE--EEe----ecCCCCeEEEEEecC---CCEEEEE-e--CCCeEEEEECC
Q 011924 310 HSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI--ASL----CGHLDFSFASAWHPN---GVTFATG-N--QDKTCRIWDLR 377 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~--~~l----~~h~~~v~~~~~sp~---g~~l~t~-s--~dg~v~iwd~~ 377 (475)
.++|.|+|+++++--..|.|++++...++.. ..+ .........++++|+ ...|+.. + .+..|.-|...
T Consensus 36 ~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~ 115 (347)
T 3das_A 36 GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYD 115 (347)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBC
T ss_pred EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeC
Confidence 8899999997776654899999987666542 222 123456889999995 3344432 2 34456656554
Q ss_pred CC-------Cce---EEEEec-CCCceEEEEEccCCCEEEEEcC-------------CCeEEEEECCCCe--------eE
Q 011924 378 NL-------SES---VAVLKG-NLGAIRSIRYTSDGRYMATAEP-------------ADFVHVYDVKSGY--------EK 425 (475)
Q Consensus 378 ~~-------~~~---~~~~~~-~~~~v~~l~~spdg~~la~~~~-------------dg~i~iwd~~~~~--------~~ 425 (475)
.. ... +..+.. .......|+|.|||.+.++.+. .|.|.=++.. +. ..
T Consensus 116 ~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~nPf~~~ 194 (347)
T 3das_A 116 EKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPGNPFPGS 194 (347)
T ss_dssp TTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTTCSSTTC
T ss_pred CCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCCCCCCCC
Confidence 31 011 112221 1123457999999986666432 2445444543 22 01
Q ss_pred EEEeccCCCeEEEEEcCCCCeEEEEEecCC-cceEEEEEeecceee
Q 011924 426 EQEIDFFGEISGISFSPDTESLFIGVWDRT-YGSLLEYGRCRNYSY 470 (475)
Q Consensus 426 ~~~~~~~~~i~~l~fspdg~~l~~~~~D~~-~~~ll~~~~~~~~~~ 470 (475)
..+..-.....+++|+|+|.. +++-.... .-++-....+.++.|
T Consensus 195 ~i~a~G~RNp~Gla~dp~G~L-~~~d~g~~~~deln~i~~G~nyGw 239 (347)
T 3das_A 195 PVYSYGHRNVQGLAWDDKQRL-FASEFGQDTWDELNAIKPGDNYGW 239 (347)
T ss_dssp CEEEBCCSBCCEEEECTTCCE-EEEECCSSSCEEEEEECTTCBCCT
T ss_pred eEEeeCCCCcceEEECCCCCE-EEEecCCCCCceeeEEcCCCEecC
Confidence 112212245779999998764 44432221 234444445555544
No 328
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.85 E-value=0.057 Score=51.27 Aligned_cols=127 Identities=13% Similarity=-0.053 Sum_probs=58.5
Q ss_pred CcEEEEECCCCceEE--EeecCCCCe-EEEEEecCCCEEEEEeC------CCeEEEEECCCCCceEEEEec---CCCceE
Q 011924 327 PDGLLVDSMTGKTIA--SLCGHLDFS-FASAWHPNGVTFATGNQ------DKTCRIWDLRNLSESVAVLKG---NLGAIR 394 (475)
Q Consensus 327 g~i~iwd~~~~~~~~--~l~~h~~~v-~~~~~sp~g~~l~t~s~------dg~v~iwd~~~~~~~~~~~~~---~~~~v~ 394 (475)
..+.+||+.+.+-.. .+.. .... .+++. -++++++.|+. ...+.+||+......-..+.. ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~-~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPW-YGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSS-CCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCC-CCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 478899988765322 2221 1111 22332 25667776653 234677876211122222221 111111
Q ss_pred EEEEccCCCEEEEEcCC----------------------CeEEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEEEEe
Q 011924 395 SIRYTSDGRYMATAEPA----------------------DFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 395 ~l~~spdg~~la~~~~d----------------------g~i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
..+...++++++.|+.+ ..+.+||+.+..-...-..........+...+++.++.|+.
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGE 325 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeee
Confidence 11233467777777632 25789998875433221111111112223347788888887
Q ss_pred cCC
Q 011924 453 DRT 455 (475)
Q Consensus 453 D~~ 455 (475)
+..
T Consensus 326 ~~~ 328 (357)
T 2uvk_A 326 TAG 328 (357)
T ss_dssp CGG
T ss_pred CCC
Confidence 654
No 329
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.84 E-value=0.3 Score=45.24 Aligned_cols=196 Identities=11% Similarity=0.084 Sum_probs=106.9
Q ss_pred EEcCcEEEEEe--cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC-------------CeEE
Q 011924 196 AVKDKLLVAGG--FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-------------CGVR 260 (475)
Q Consensus 196 ~~~~~~lvsg~--~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d-------------g~v~ 260 (475)
+.+++.|+... .++.|...+.+..... ++... .+--+ +++|+++..+...+ ..|+
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~---~l~~~-----~~~~i--~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy 91 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIH---KLSND-----TAMYI--NADKNYVYYVRNNNQKITSQTFFSYDRNSLC 91 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCE---EEEEE-----EEEEE--EECSSEEEEEEECC------CCSSCCSEEEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCE---EccCC-----ceeeE--EEcCCEEEEEECCCCcccccceeccCCCeEE
Confidence 35777777654 2566666665543332 22111 12222 78898867666554 3566
Q ss_pred EEECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEe----CCCcEEEEECCC
Q 011924 261 DFDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVG----DNPDGLLVDSMT 336 (475)
Q Consensus 261 iwd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~----~dg~i~iwd~~~ 336 (475)
..++...+... +. ..+ +..|+|+++.|+... ....|+..++.
T Consensus 92 ~i~~dg~~~~~-l~-~~~-------------------------------~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d- 137 (302)
T 3s25_A 92 RIKRNGHGSTV-LD-PDP-------------------------------CIYASLIGNYIYYLHYDTQTATSLYRIRID- 137 (302)
T ss_dssp EEETTSCCCEE-EE-CSC-------------------------------EEEEEEETTEEEEEEESSSSCEEEEEEETT-
T ss_pred EEeCCCCcceE-ee-cCC-------------------------------ccEEEEeCCEEEEEeecCCCCceEEEEECC-
Confidence 66665543221 11 111 336778888888775 34456666665
Q ss_pred CceEEEeecCCCCeEEEEEecCCCEEEEEeC-CCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCC--Ce
Q 011924 337 GKTIASLCGHLDFSFASAWHPNGVTFATGNQ-DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA--DF 413 (475)
Q Consensus 337 ~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~-dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~d--g~ 413 (475)
|.....+..+.. .+|+|+++.|+-.+. ..+|.+-++.. +.. +.+.. +... ..++|++++|+..... ..
T Consensus 138 Gs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g-~~~-~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~ 208 (302)
T 3s25_A 138 GEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS-QSE-ALFYD--CNCY-KPVVLDDTNVYYMDVNRDNA 208 (302)
T ss_dssp SCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTT-TEE-EEEEC--SCEE-EEEEEETTEEEEEEGGGTTE
T ss_pred CCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC-CCE-EEEeC--CCcc-ceeeecCCEEEEEEcCCCcE
Confidence 444455554433 456788888886655 56788888754 333 33322 2222 3466999988876543 35
Q ss_pred EEEEECCCCeeEEEEeccCCCeEEEEEcCCCCeEEE
Q 011924 414 VHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFI 449 (475)
Q Consensus 414 i~iwd~~~~~~~~~~~~~~~~i~~l~fspdg~~l~~ 449 (475)
|..-++..+. ...+.. ..+ ..|+|++.+|+-
T Consensus 209 I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~ 239 (302)
T 3s25_A 209 IVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFY 239 (302)
T ss_dssp EEEECSSSCC-CEECSC--SCE--EEEEEETTEEEE
T ss_pred EEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEE
Confidence 6666665443 333322 222 235666665554
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.0097 Score=56.12 Aligned_cols=202 Identities=9% Similarity=0.022 Sum_probs=103.8
Q ss_pred CcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEE-eCCCeEEEEECCCCeeeeeeeccc
Q 011924 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTAS-NNDCGVRDFDMGKYQLSKHFRFPW 277 (475)
Q Consensus 199 ~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~-s~dg~v~iwd~~~~~~~~~~~~~~ 277 (475)
+.+++.++.||.|...|..+++........ .....+. ..--..+.+..+++.. +.||.|..++..+|.....+..+.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~-~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIE-IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEE-CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEE-ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 357888899999999998776655543332 1111111 1000011122334443 689999999998886555444332
Q ss_pred cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEE-C----CCCcEEEEEeCCCcEEEEECCCCceEEEeecCC--CC-
Q 011924 278 PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQ-S----PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL--DF- 349 (475)
Q Consensus 278 ~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~-s----p~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~--~~- 349 (475)
.+..+|.. + .+ ...+ . -.+..+++++.++.+...|+++|+.+..+.... ..
T Consensus 88 lv~~SP~~---------~--~~----------~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~ 146 (339)
T 2be1_A 88 LVSTSPLH---------L--KT----------NIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYF 146 (339)
T ss_dssp HHTTCSEE---------E--EC----------C----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--
T ss_pred ceeccccc---------c--CC----------CceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccc
Confidence 22100000 0 00 0011 0 145678889999999999999999998886421 10
Q ss_pred ----eEEEEEe-----cCCCEEEEEeCCCeEEEEECCCCCce----EEEEecCCCc--e-EEEEEccCCCEEEEEcCCCe
Q 011924 350 ----SFASAWH-----PNGVTFATGNQDKTCRIWDLRNLSES----VAVLKGNLGA--I-RSIRYTSDGRYMATAEPADF 413 (475)
Q Consensus 350 ----v~~~~~s-----p~g~~l~t~s~dg~v~iwd~~~~~~~----~~~~~~~~~~--v-~~l~~spdg~~la~~~~dg~ 413 (475)
..|.... -.+..++.+..+..+.+.+ ++ ++. .......... + .+-..+.|+++ +.++.||.
T Consensus 147 ~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~s-G~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~ 223 (339)
T 2be1_A 147 GSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YD-GASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKS 223 (339)
T ss_dssp ------------------CCEEEEEEEEEECEECC-TT-SCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTE
T ss_pred cccccccccccccccccCCCeEEEecceEEEEEEC-CC-CCeEEEecccccccccccccccccccccCCcE-EEECCCCE
Confidence 1111111 1235677777666666665 23 220 1111111000 0 00001234666 34677888
Q ss_pred EEEEECCCCeeEE
Q 011924 414 VHVYDVKSGYEKE 426 (475)
Q Consensus 414 i~iwd~~~~~~~~ 426 (475)
|.-+|..+|..+-
T Consensus 224 v~A~d~~~G~~~W 236 (339)
T 2be1_A 224 LLASDLDFRIARW 236 (339)
T ss_dssp EEEECSTTCCEEE
T ss_pred EEEEECCCCcEEE
Confidence 8888888777654
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.76 E-value=0.33 Score=45.00 Aligned_cols=105 Identities=15% Similarity=0.190 Sum_probs=56.3
Q ss_pred CCCcEEEEEeC------CCcEEEEECCCCceEEEeecC-CC-CeEEEEEecCCCEEEEEeCC-----CeEEEEECCCCCc
Q 011924 315 PDGKLLIIVGD------NPDGLLVDSMTGKTIASLCGH-LD-FSFASAWHPNGVTFATGNQD-----KTCRIWDLRNLSE 381 (475)
Q Consensus 315 p~g~~l~~~~~------dg~i~iwd~~~~~~~~~l~~h-~~-~v~~~~~sp~g~~l~t~s~d-----g~v~iwd~~~~~~ 381 (475)
.++++++.|+. -..+.+||+.+.+-. .+... .. .-.+++. -++++++.|+.+ ..+.+||+.+ .+
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~ 233 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK-DLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKT-NK 233 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTT-CC
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEE-ECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCC-Ce
Confidence 46777777764 245899998876532 22211 11 1112222 266777777643 3577899865 22
Q ss_pred eEEEEec---CCCceEEEEEccCCCEEEEEcCC--------------CeEEEEECCCCeeE
Q 011924 382 SVAVLKG---NLGAIRSIRYTSDGRYMATAEPA--------------DFVHVYDVKSGYEK 425 (475)
Q Consensus 382 ~~~~~~~---~~~~v~~l~~spdg~~la~~~~d--------------g~i~iwd~~~~~~~ 425 (475)
-..+.. .......+ .-++++++.|+.+ ..+.+||+.+.+-.
T Consensus 234 -W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 234 -WEVMTEFPQERSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp -EEECCCCSSCCBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred -EEECCCCCCcccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 122211 11111222 2356777777643 35888998876543
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.62 E-value=0.19 Score=46.43 Aligned_cols=188 Identities=13% Similarity=0.066 Sum_probs=96.4
Q ss_pred EEcCcEEEEEec----C-----ceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCC-----CeEEE
Q 011924 196 AVKDKLLVAGGF----Q-----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVRD 261 (475)
Q Consensus 196 ~~~~~~lvsg~~----d-----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~d-----g~v~i 261 (475)
..++.+++.||. + ..+.++|+.+........ .........++.+ +++ +++.|+.+ ..+.+
T Consensus 68 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~----~~~-iyv~GG~~~~~~~~~~~~ 141 (308)
T 1zgk_A 68 VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP-MSVPRNRIGVGVI----DGH-IYAVGGSHGCIHHNSVER 141 (308)
T ss_dssp EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC-CSSCCBTCEEEEE----TTE-EEEECCEETTEECCCEEE
T ss_pred EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC-CCcCccccEEEEE----CCE-EEEEcCCCCCcccccEEE
Confidence 348888888887 3 357778876654332111 1111111122222 444 46665432 35778
Q ss_pred EECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCC-----CcEEEEECCC
Q 011924 262 FDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDN-----PDGLLVDSMT 336 (475)
Q Consensus 262 wd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~d-----g~i~iwd~~~ 336 (475)
||+.+.+....-..+.+...+ .++.+ ++++++.|+.+ ..+.+||+.+
T Consensus 142 yd~~~~~W~~~~~~p~~r~~~--------------------------~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 142 YEPERDEWHLVAPMLTRRIGV--------------------------GVAVL--NRLLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp EETTTTEEEECCCCSSCCBSC--------------------------EEEEE--TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred ECCCCCeEeECCCCCccccce--------------------------EEEEE--CCEEEEEeCCCCCCcCceEEEEeCCC
Confidence 888776544322222111100 02222 67777777654 4688999876
Q ss_pred CceEEEeec---CCCCeEEEEEecCCCEEEEEeCC-----CeEEEEECCCCCceEEEEec---CCCceEEEEEccCCCEE
Q 011924 337 GKTIASLCG---HLDFSFASAWHPNGVTFATGNQD-----KTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYM 405 (475)
Q Consensus 337 ~~~~~~l~~---h~~~v~~~~~sp~g~~l~t~s~d-----g~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~spdg~~l 405 (475)
.+-. .+.. ......++.+ ++++++.|+.+ ..+.+||+.+ .+ -..+.. .......+. -+++++
T Consensus 194 ~~W~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~i~ 266 (308)
T 1zgk_A 194 NEWR-MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET-ET-WTFVAPMKHRRSALGITV--HQGRIY 266 (308)
T ss_dssp TEEE-ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-TE-EEECCCCSSCCBSCEEEE--ETTEEE
T ss_pred CeEe-eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC-Cc-EEECCCCCCCccceEEEE--ECCEEE
Confidence 6432 2221 1111122222 67777777654 4589999865 32 222221 111112222 267777
Q ss_pred EEEcCC-----CeEEEEECCCCee
Q 011924 406 ATAEPA-----DFVHVYDVKSGYE 424 (475)
Q Consensus 406 a~~~~d-----g~i~iwd~~~~~~ 424 (475)
+.|+.+ ..|.+||+.+.+-
T Consensus 267 v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 267 VLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp EECCBCSSCBCCEEEEEETTTTEE
T ss_pred EEcCcCCCcccceEEEEcCCCCEE
Confidence 777643 4688999887643
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.55 E-value=0.54 Score=44.37 Aligned_cols=230 Identities=14% Similarity=0.114 Sum_probs=119.3
Q ss_pred EEEEEE--cCcEEEEEecCceEEEEeCCCCCceEEEe---eecCCCCceeEEEEEeCCC---CCeEEEEEe--CCCeEEE
Q 011924 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSR---TTYDDNAITNAVEIYGSPS---GAVHFTASN--NDCGVRD 261 (475)
Q Consensus 192 v~~l~~--~~~~lvsg~~dg~i~vw~~~~~~~~~~~~---~~~~~~~~v~~l~~~~s~~---g~~~l~s~s--~dg~v~i 261 (475)
-..|++ +|.++|+--..|.|++++........... +..........|++ +|+ +..++++-+ .+..|.-
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~--~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIAL--SPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEE--CTTHHHHCEEEEEEECSSSEEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEe--ccccccCCEEEEEEecCCCCEEEE
Confidence 346777 77777766558999988754333221111 11223445677888 885 333344322 3344554
Q ss_pred EECCCCe-----e---eeeee-ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeC-------
Q 011924 262 FDMGKYQ-----L---SKHFR-FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGD------- 325 (475)
Q Consensus 262 wd~~~~~-----~---~~~~~-~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~------- 325 (475)
|.+..+. . ...+. .+.. . .+ ....++|.|+|.+.++.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~-~---------------~H---------~g~~l~fgpDG~Lyvt~Gd~~~~~~~ 166 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKG-V---------------IH---------NGGRIAFGPDKMLYAGTGESGDTGLS 166 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCC-S---------------SC---------CCCCEEECTTSCEEEECBCTTCGGGT
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCC-C---------------Cc---------cCccccCCCCCCEEEEECCCCCCccc
Confidence 5544311 0 00010 0000 0 00 0116899999988887653
Q ss_pred ------CCcEEEEECCCCc--------eEEEe-ecCCCCeEEEEEecCCCEEEEEe-CCCeEEEEECCCC----------
Q 011924 326 ------NPDGLLVDSMTGK--------TIASL-CGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNL---------- 379 (475)
Q Consensus 326 ------dg~i~iwd~~~~~--------~~~~l-~~h~~~v~~~~~sp~g~~l~t~s-~dg~v~iwd~~~~---------- 379 (475)
.|.|.-++.. |+ ....+ .+|. ....++|+|+|.+.++=. .++.-.|--+...
T Consensus 167 qd~~~~~G~IlRi~~d-G~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g 244 (347)
T 3das_A 167 QDRKSLGGKILRMTPD-GEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEG 244 (347)
T ss_dssp TCTTCSTTCEEEECTT-SSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCS
T ss_pred cCCCCCCCEEEEEeCC-CCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccC
Confidence 3455544543 22 01112 2444 356799999887666543 2332222222211
Q ss_pred -------CceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCee----EEEEeccCCCeEEEEEcCCCCeEE
Q 011924 380 -------SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE----KEQEIDFFGEISGISFSPDTESLF 448 (475)
Q Consensus 380 -------~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~----~~~~~~~~~~i~~l~fspdg~~l~ 448 (475)
..++..+..+..+...++|. +|..+...-..+.|....+..+.. ...+.+..+++.+++..|||..++
T Consensus 245 ~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv 323 (347)
T 3das_A 245 KGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWL 323 (347)
T ss_dssp SCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEE
T ss_pred CCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEE
Confidence 12344444433456788886 466665555556677667655432 112223457899999999997665
Q ss_pred EEE
Q 011924 449 IGV 451 (475)
Q Consensus 449 ~~~ 451 (475)
+..
T Consensus 324 ~td 326 (347)
T 3das_A 324 VTS 326 (347)
T ss_dssp EEC
T ss_pred EEc
Confidence 543
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.50 E-value=0.27 Score=51.43 Aligned_cols=223 Identities=13% Similarity=0.082 Sum_probs=114.8
Q ss_pred EcCcEEEEEecC----ceEEEEeCCCCCceEEE-ee----ecCCCCceeEEEEEeCCCCCeEEEEEeCC------CeEEE
Q 011924 197 VKDKLLVAGGFQ----GELICKHLDRPGVSFCS-RT----TYDDNAITNAVEIYGSPSGAVHFTASNND------CGVRD 261 (475)
Q Consensus 197 ~~~~~lvsg~~d----g~i~vw~~~~~~~~~~~-~~----~~~~~~~v~~l~~~~s~~g~~~l~s~s~d------g~v~i 261 (475)
.++.+++.||.+ ..+.++|..+....... .. .......-.++.+ ..++. +++.|+.+ ..+.+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~--~~~~~-lyv~GG~~~~~~~~~dv~~ 472 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTI--SRNNQ-LLLIGGRKAPHQGLSDNWI 472 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEE--TTTTE-EEEECCBSSTTCBCCCCEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEE--ccCCE-EEEEcCCCCCCCccccEEE
Confidence 588888899864 46778888766544322 10 0111111122222 22555 46666543 34778
Q ss_pred EECCCCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCC--cEEEEECCCCce
Q 011924 262 FDMGKYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNP--DGLLVDSMTGKT 339 (475)
Q Consensus 262 wd~~~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg--~i~iwd~~~~~~ 339 (475)
||..+.+....-..+.+...+ +++.-.++++++.||.++ .+.+||+.+.+-
T Consensus 473 yd~~t~~W~~~~~~p~~R~~h---------------------------~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 473 FDMKTREWSMIKSLSHTRFRH---------------------------SACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp EETTTTEEEECCCCSBCCBSC---------------------------EEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred EeCCCCcEEECCCCCCCcccc---------------------------eEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 888776543332212111100 333334888888887654 789999887653
Q ss_pred EEEeec------CCCCeEEEEEecC-CCEEEEEeC--C-----CeEEEEECCCCCc----eEEEEec----CCCceEEEE
Q 011924 340 IASLCG------HLDFSFASAWHPN-GVTFATGNQ--D-----KTCRIWDLRNLSE----SVAVLKG----NLGAIRSIR 397 (475)
Q Consensus 340 ~~~l~~------h~~~v~~~~~sp~-g~~l~t~s~--d-----g~v~iwd~~~~~~----~~~~~~~----~~~~v~~l~ 397 (475)
..+.. ......++.+..+ +++++.|+. + ..+.+||+.+..- .-..+.. ..... ++.
T Consensus 526 -~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~ 603 (695)
T 2zwa_A 526 -KDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIK 603 (695)
T ss_dssp -EECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEE
T ss_pred -EEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEE
Confidence 22221 1112233555655 677777765 2 3588999876320 0122211 11111 233
Q ss_pred EccCCCEEEEEcC--------CCeEEEEECCCCeeEEEEeccCCC---------e-EEEEEcCCCCeEEEEEec
Q 011924 398 YTSDGRYMATAEP--------ADFVHVYDVKSGYEKEQEIDFFGE---------I-SGISFSPDTESLFIGVWD 453 (475)
Q Consensus 398 ~spdg~~la~~~~--------dg~i~iwd~~~~~~~~~~~~~~~~---------i-~~l~fspdg~~l~~~~~D 453 (475)
...++++++.|+. ...|.+||+.+..-.. . ..... + .++...++|+.++.|+..
T Consensus 604 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~-~-~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 604 YITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTS-I-PISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp EEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEE-C-CCCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred EeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEE-e-eccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 3334777777774 3469999998875441 1 11110 0 234444566777777654
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.36 E-value=0.16 Score=47.17 Aligned_cols=131 Identities=15% Similarity=0.122 Sum_probs=66.0
Q ss_pred CCcEEEEEeCC-------CcEEEEECCCCceEEEeecCCCC-e-EEEEEecCCCEEEEEeC------CCeEEEEECCCCC
Q 011924 316 DGKLLIIVGDN-------PDGLLVDSMTGKTIASLCGHLDF-S-FASAWHPNGVTFATGNQ------DKTCRIWDLRNLS 380 (475)
Q Consensus 316 ~g~~l~~~~~d-------g~i~iwd~~~~~~~~~l~~h~~~-v-~~~~~sp~g~~l~t~s~------dg~v~iwd~~~~~ 380 (475)
++++++.|+.+ ..+.+||+.+.+-. .+..-..+ . .+++. .++++++.|+. -..+.+||..+ .
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~ 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKK-G 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTT-T
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCC-C
Confidence 67788888753 34778898766532 22211111 1 11222 46777777754 23588999865 3
Q ss_pred ceEEEEec---CCCceEEEEEccCCCEEEEEcCC-----CeEEEEECCCCeeEEEEecc--CCCeEEEEEcCCCCeEEEE
Q 011924 381 ESVAVLKG---NLGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKSGYEKEQEIDF--FGEISGISFSPDTESLFIG 450 (475)
Q Consensus 381 ~~~~~~~~---~~~~v~~l~~spdg~~la~~~~d-----g~i~iwd~~~~~~~~~~~~~--~~~i~~l~fspdg~~l~~~ 450 (475)
+ -..+.. .......+. -++++++.|+.+ ..+.+||+.+..-....... ......+. -+++.++.|
T Consensus 186 ~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~G 260 (318)
T 2woz_A 186 D-WKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLYAIG 260 (318)
T ss_dssp E-EEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEEEEC
T ss_pred E-EEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEEEEC
Confidence 2 222221 111112222 256777777643 35889998876432211111 11112222 356677777
Q ss_pred EecC
Q 011924 451 VWDR 454 (475)
Q Consensus 451 ~~D~ 454 (475)
+.+.
T Consensus 261 G~~~ 264 (318)
T 2woz_A 261 GFAM 264 (318)
T ss_dssp CBCC
T ss_pred Ceec
Confidence 7653
No 336
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.30 E-value=0.061 Score=51.23 Aligned_cols=142 Identities=9% Similarity=0.005 Sum_probs=77.5
Q ss_pred eEEECCCCcEEEEEeCCCcEEEEECCCCceEEEee-------cCCCCeEEEEEecC---CCEEEEE-eC-------CCeE
Q 011924 310 HSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC-------GHLDFSFASAWHPN---GVTFATG-NQ-------DKTC 371 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~-------~h~~~v~~~~~sp~---g~~l~t~-s~-------dg~v 371 (475)
.++|.|+|+.|+++...|.|++++. .++....+. ........++++|+ +..|+.+ +. ...|
T Consensus 22 ~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v 100 (353)
T 2g8s_A 22 ALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAV 100 (353)
T ss_dssp EEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEE
T ss_pred EEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEE
Confidence 8899999993444556789999985 343211111 12345689999995 4444444 22 2356
Q ss_pred EEEECCCCC-c--eEE-EEec------CCCceEEEEEccCCCEEEEEcC-------------CCeEEEEECCCCe-----
Q 011924 372 RIWDLRNLS-E--SVA-VLKG------NLGAIRSIRYTSDGRYMATAEP-------------ADFVHVYDVKSGY----- 423 (475)
Q Consensus 372 ~iwd~~~~~-~--~~~-~~~~------~~~~v~~l~~spdg~~la~~~~-------------dg~i~iwd~~~~~----- 423 (475)
..|++.... . ... .+.. .......++|.|||.+.++.+. .|.|.-++....-
T Consensus 101 ~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~np 180 (353)
T 2g8s_A 101 GYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNP 180 (353)
T ss_dssp EEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCT
T ss_pred EEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCC
Confidence 666664311 1 111 1211 1112357999999965554332 2467777754320
Q ss_pred -------eEEEEeccCCCeEEEEEcCCCCeEEEEEe
Q 011924 424 -------EKEQEIDFFGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 424 -------~~~~~~~~~~~i~~l~fspdg~~l~~~~~ 452 (475)
....+..-.....+++|+|....|+++-.
T Consensus 181 f~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 181 FIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp TTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEE
T ss_pred CcCCCCCCccEEEEcCcCccceEEECCCCCEEEEec
Confidence 11122222245789999995445666543
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.04 E-value=0.1 Score=57.75 Aligned_cols=202 Identities=16% Similarity=0.104 Sum_probs=114.2
Q ss_pred cCCCeEEEecCCeEEEEecCCCC-ceEEEeccCCCCCCCCCCCCccccccceeEEEEEE--cCcEEEEEe-------cCc
Q 011924 140 TSKHDVYLMSHFSVIHWSSLTSS-RSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGG-------FQG 209 (475)
Q Consensus 140 ~~~~~v~~~~~~~v~~w~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~lvsg~-------~dg 209 (475)
.+.+.|-.+.+..|+||+..... ..++++.. ..+.+.+|..... +.++++..| -.|
T Consensus 114 is~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~--------------~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G 179 (1630)
T 1xi4_A 114 ISLNTVALVTDNAVYHWSMEGESQPVKMFDRH--------------SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG 179 (1630)
T ss_pred cCCCeeEEEcCCeEEEeccCCCCccHHHHhcc--------------hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccc
Confidence 45667888999999999875321 12222221 1223467777777 666666443 348
Q ss_pred eEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeC---CCeEEEEECCCC-eeeeeee-ccccEEeccC
Q 011924 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN---DCGVRDFDMGKY-QLSKHFR-FPWPVNVSSS 284 (475)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~---dg~v~iwd~~~~-~~~~~~~-~~~~v~~s~~ 284 (475)
.+.+++++.... +...+|.+.-..+.+.-.+....+++.+.. .+.++|.++... .....|. ..-.+.|.|.
T Consensus 180 ~mQLyS~er~~s----Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~ 255 (1630)
T 1xi4_A 180 AMQLYSVDRKVS----QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 255 (1630)
T ss_pred eeeeeecccccc----hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcc
Confidence 888998875432 334455444333333112222223333322 267888877432 1111111 0111111111
Q ss_pred CceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEE
Q 011924 285 YCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT 364 (475)
Q Consensus 285 ~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t 364 (475)
.. ..- .| ++.+|+.-..+...+.-|.++++|+.||.++..-+-...+|+..+-++...-++.
T Consensus 256 ~~-----------~Df------pv-~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~ 317 (1630)
T 1xi4_A 256 AQ-----------NDF------PV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIG 317 (1630)
T ss_pred cc-----------cCc------ce-EEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEE
Confidence 00 000 01 7888998888888999999999999999987655555667777766665555666
Q ss_pred EeCCCeEEEEECC
Q 011924 365 GNQDKTCRIWDLR 377 (475)
Q Consensus 365 ~s~dg~v~iwd~~ 377 (475)
.+..|.|.--.+.
T Consensus 318 vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 318 VNRKGQVLSVCVE 330 (1630)
T ss_pred EcCCceEEEEEEc
Confidence 6677776666554
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.89 E-value=0.34 Score=45.75 Aligned_cols=109 Identities=15% Similarity=-0.021 Sum_probs=53.8
Q ss_pred CCcEEEEEeC------CCcEEEEEC--CCCceEEEeecC---CCCeEEEEEecCCCEEEEEeCC----------------
Q 011924 316 DGKLLIIVGD------NPDGLLVDS--MTGKTIASLCGH---LDFSFASAWHPNGVTFATGNQD---------------- 368 (475)
Q Consensus 316 ~g~~l~~~~~------dg~i~iwd~--~~~~~~~~l~~h---~~~v~~~~~sp~g~~l~t~s~d---------------- 368 (475)
++++++.|+. ...+.+||+ .+.+ ...+... .......+...++++++.|+.+
T Consensus 200 ~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~ 278 (357)
T 2uvk_A 200 GDKTWLINGEAKPGLRTDAVFELDFTGNNLK-WNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAH 278 (357)
T ss_dssp TTEEEEECCEEETTEECCCEEEEECC---CE-EEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTT
T ss_pred CCEEEEEeeecCCCcccCceEEEEecCCCCc-EEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceecc
Confidence 5677777653 345777887 3332 2222211 1111212233467777777632
Q ss_pred ------CeEEEEECCCC-CceEEEEecCCCceEEEEEccCCCEEEEEcCCC------eEEEEECCCCeeEEE
Q 011924 369 ------KTCRIWDLRNL-SESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD------FVHVYDVKSGYEKEQ 427 (475)
Q Consensus 369 ------g~v~iwd~~~~-~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg------~i~iwd~~~~~~~~~ 427 (475)
..+.+||+.+. ...+..+........+ ...++++++.|+.++ .|.++++++++....
T Consensus 279 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 279 EGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp TTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred ccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 24778998642 2233333322222222 334678888887542 466678877665544
No 339
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.64 E-value=0.7 Score=51.40 Aligned_cols=210 Identities=12% Similarity=0.093 Sum_probs=121.4
Q ss_pred cCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeeccccEEe----c
Q 011924 207 FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNV----S 282 (475)
Q Consensus 207 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~----s 282 (475)
...+|.|.|+..+..... +-.... +.-+ +|..+. ++.- ...++.||++++.+.+..+..+.+|.| +
T Consensus 46 ~~~~vvIidl~~~~~~~r-rpi~Ad-----sAIM--nP~~~i-iALr-ag~~lQiFnl~~k~klks~~~~e~VvfWkWis 115 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIR-RPISAD-----SAIM--NPASKV-IALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 115 (1630)
T ss_pred CCceEEEEECCCCCCccc-ccccch-----hhcc--CCCcce-EEEe-cCCeEEEeehHHhhhhcccccCCCceEEEecC
Confidence 344788889887553311 111111 1223 787764 4443 478999999999888888877767763 3
Q ss_pred cCCceEE---EEEEeecccce-EEEE--------eeeeeeEEECCCCcEEEEEe-------CCCcEEEEECCCCceEEEe
Q 011924 283 SSYCIIL---LCRLLNFMTEK-VIIC--------LLCLQHSSQSPDGKLLIIVG-------DNPDGLLVDSMTGKTIASL 343 (475)
Q Consensus 283 ~~~~~l~---~~~v~d~~~~~-~~~~--------~~~i~~~~~sp~g~~l~~~~-------~dg~i~iwd~~~~~~~~~l 343 (475)
+..-.+. .+-.|++.... +.+. ..-|..-..+++.++++..| -.|.+.+|....+ ..+.+
T Consensus 116 ~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~i 194 (1630)
T 1xi4_A 116 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPI 194 (1630)
T ss_pred CCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhh
Confidence 3322221 56788875321 1110 01344667788899887654 2477888887533 34556
Q ss_pred ecCCCCeEEEEEe--c-CCCEEEEEeC---CCeEEEEECCCC--Cce------EEEEecC---CCceEEEEEccCCCEEE
Q 011924 344 CGHLDFSFASAWH--P-NGVTFATGNQ---DKTCRIWDLRNL--SES------VAVLKGN---LGAIRSIRYTSDGRYMA 406 (475)
Q Consensus 344 ~~h~~~v~~~~~s--p-~g~~l~t~s~---dg~v~iwd~~~~--~~~------~~~~~~~---~~~v~~l~~spdg~~la 406 (475)
.||...-..+... | ...+++.+.. .+.++|-++... +.+ +...-.. ..-..++..|+.-.++.
T Consensus 195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy 274 (1630)
T 1xi4_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (1630)
T ss_pred hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEE
Confidence 7776544333321 1 2234443332 268888888542 111 1111111 12233677777777888
Q ss_pred EEcCCCeEEEEECCCCeeEEE
Q 011924 407 TAEPADFVHVYDVKSGYEKEQ 427 (475)
Q Consensus 407 ~~~~dg~i~iwd~~~~~~~~~ 427 (475)
.-+.-|.|++||+.||.++..
T Consensus 275 ~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 275 LITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEecCceEEEEecccchhhhh
Confidence 888899999999999987644
No 340
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.41 E-value=0.6 Score=40.73 Aligned_cols=97 Identities=12% Similarity=0.098 Sum_probs=56.3
Q ss_pred eEEECCCCcEEEEEeCCCcEEEEECCCC-ce------EEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCC-c
Q 011924 310 HSSQSPDGKLLIIVGDNPDGLLVDSMTG-KT------IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS-E 381 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~dg~i~iwd~~~~-~~------~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~-~ 381 (475)
++.|.|+|.+.++ .||.|+-++..+. .. ...-.+-=..+..+.+.|+|.+.+.. |+.+.-+..-... .
T Consensus 92 a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~ 167 (236)
T 1tl2_A 92 FLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQD 167 (236)
T ss_dssp EEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTC
T ss_pred EEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCc
Confidence 7889999998888 5588887775321 11 11111111357889999999877777 7764322211100 0
Q ss_pred ----eEEEEe-cCCCceEEEEEccCCCEEEEEcCCC
Q 011924 382 ----SVAVLK-GNLGAIRSIRYTSDGRYMATAEPAD 412 (475)
Q Consensus 382 ----~~~~~~-~~~~~v~~l~~spdg~~la~~~~dg 412 (475)
....+. ..-..-+.+.|+|+|.+.++. ++
T Consensus 168 ~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g 201 (236)
T 1tl2_A 168 NWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG 201 (236)
T ss_dssp CHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred ccccccceeccCCcceEEEEEECCCCcEEEEe--CC
Confidence 111111 223345567799999877766 55
No 341
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.39 E-value=4.3 Score=44.91 Aligned_cols=182 Identities=12% Similarity=0.071 Sum_probs=95.6
Q ss_pred eeEEEEEEc--------CcEEEEEec-CceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEE
Q 011924 190 TQVSTLAVK--------DKLLVAGGF-QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVR 260 (475)
Q Consensus 190 ~~v~~l~~~--------~~~lvsg~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~ 260 (475)
..|+|+++. +.+++.|.. +++++++++........ .... ......++.+... .+..+|..|-.||.+.
T Consensus 554 ~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~-~~L~-~~~~p~si~l~~~-~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 554 HEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHK-EMLG-GEIIPRSILMTTF-ESSHYLLCALGDGALF 630 (1158)
T ss_dssp SCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEE-EECC-SSCCEEEEEEEEE-TTEEEEEEEETTSEEE
T ss_pred CceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEE-EECC-CCCCCcEEEEEEe-CCCcEEEEEeCCCeEE
Confidence 368899882 479999997 99999999986544322 2222 2234455555322 3445577888899876
Q ss_pred EEEC--CCCeeeee---eeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCC-cEEEEEeCCCcEEEEEC
Q 011924 261 DFDM--GKYQLSKH---FRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDG-KLLIIVGDNPDGLLVDS 334 (475)
Q Consensus 261 iwd~--~~~~~~~~---~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~dg~i~iwd~ 334 (475)
-+.+ .++++... +-...++. -..+...| ..+++.+. ....++-.
T Consensus 631 ~~~~d~~tg~l~d~r~~~LG~~pv~-----------------------------L~~~~~~~~~~V~a~s~-rp~liy~~ 680 (1158)
T 3ei3_A 631 YFGLNIETGLLSDRKKVTLGTQPTV-----------------------------LRTFRSLSTTNVFACSD-RPTVIYSS 680 (1158)
T ss_dssp EEEECTTTCCEEEEEEEECCSSCCE-----------------------------EEEEESSSCEEEEEESS-SCEEEEES
T ss_pred EEEEcCCCCccccceeEEcCCCceE-----------------------------EEEEeeCCceeEEEECC-CCEEEEEc
Confidence 5554 34544322 11233444 11222223 23333433 33444443
Q ss_pred CCCceEE-EeecCCCCeEEEEEecC--CCEEEEEeCCCeEEEEECCCCCc-eEEEEecCCCceEEEEEccCCCEEEEE
Q 011924 335 MTGKTIA-SLCGHLDFSFASAWHPN--GVTFATGNQDKTCRIWDLRNLSE-SVAVLKGNLGAIRSIRYTSDGRYMATA 408 (475)
Q Consensus 335 ~~~~~~~-~l~~h~~~v~~~~~sp~--g~~l~t~s~dg~v~iwd~~~~~~-~~~~~~~~~~~v~~l~~spdg~~la~~ 408 (475)
+ ++... .+. ...--....|+.. ..-++..+ ++.++|.-+....+ .++.+.- ...++.++++|..+.++.+
T Consensus 681 ~-~~l~~s~l~-~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL-~~Tprri~y~~~~~~~~v~ 754 (1158)
T 3ei3_A 681 N-HKLVFSNVN-LKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPL-YESPRKICYQEVSQCFGVL 754 (1158)
T ss_dssp S-SSEEEEEBS-SSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEEC-SSEEEEEEEEGGGTEEEEE
T ss_pred C-CceEEeccC-hHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeC-CCCceEEEEcCCCCEEEEE
Confidence 3 33221 121 1122234456442 23455443 45699988754333 3333333 3467888998877765543
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.44 E-value=2.3 Score=41.77 Aligned_cols=32 Identities=6% Similarity=0.071 Sum_probs=20.6
Q ss_pred ceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe
Q 011924 234 ITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (475)
Q Consensus 234 ~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~ 268 (475)
.-+.++| .|+|+. +++-...+.|++++...++
T Consensus 28 ~P~~~a~--~pdG~l-~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 28 KPHALLW--GPDNQI-WLTERATGKILRVNPESGS 59 (454)
T ss_dssp SEEEEEE--CTTSCE-EEEETTTCEEEEECTTTCC
T ss_pred CceEEEE--cCCCcE-EEEEcCCCEEEEEECCCCc
Confidence 3467777 999973 5554333468888765444
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.04 E-value=5.4 Score=39.83 Aligned_cols=58 Identities=12% Similarity=0.054 Sum_probs=39.3
Q ss_pred ceEEEEEccCCCEEEEEcC-CCeEEEEECCCC------ee------EEEEeccCCCeEEEEEcCCCCeEEEE
Q 011924 392 AIRSIRYTSDGRYMATAEP-ADFVHVYDVKSG------YE------KEQEIDFFGEISGISFSPDTESLFIG 450 (475)
Q Consensus 392 ~v~~l~~spdg~~la~~~~-dg~i~iwd~~~~------~~------~~~~~~~~~~i~~l~fspdg~~l~~~ 450 (475)
....+.++|||+++++++. +.++.|+|+++- +. +.......-.....+|.++| ..++.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTt 394 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTT 394 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEee
Confidence 4568899999998887664 789999998742 11 11112233467889999999 44444
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.63 E-value=8.1 Score=40.47 Aligned_cols=216 Identities=11% Similarity=0.032 Sum_probs=122.7
Q ss_pred eeEEEEEE-cCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCe
Q 011924 190 TQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (475)
Q Consensus 190 ~~v~~l~~-~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~ 268 (475)
..|.++.. ....|-.|+.+| +.+++..+.... .........|.++.. .+|. +..++.+ .|..++..+++
T Consensus 63 ~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~---~~~~~~~~~i~~i~~---~~g~--lWigt~~-Gl~~~~~~~~~ 132 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYE---QPETDFPTDVRTMAL---QGDT--LWLGALN-GLYTYQLQSRK 132 (758)
T ss_dssp SCEEEEEEETTTEEEEEETTE-EEEEETTTTEEC---CCSCCCCSCEEEEEE---ETTE--EEEEETT-EEEEEETTTCC
T ss_pred ceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEE---CcccCCCceEEEEEe---cCCc--EEEEcCC-cceeEeCCCCe
Confidence 45888777 556777777665 778887653211 111111234555543 3453 4445455 68888987655
Q ss_pred eeeeee-----ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEe
Q 011924 269 LSKHFR-----FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL 343 (475)
Q Consensus 269 ~~~~~~-----~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l 343 (475)
...... ....|. ++....+|.+.+ ++.. -+..++..+++.. .+
T Consensus 133 ~~~~~~~~~~l~~~~i~-----------------------------~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~ 180 (758)
T 3ott_A 133 LTSFDTRRNGLPNNTIY-----------------------------SIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GI 180 (758)
T ss_dssp EEEECHHHHCCSCSCEE-----------------------------EEEECTTCCEEE-EETT-EEEEEETTTTEEE-EE
T ss_pred EEEeccCCCCcCCCeEE-----------------------------EEEEcCCCCEEE-EeCC-CHhhCccCCCceE-Ee
Confidence 432211 112344 777777887665 4444 4788887766533 22
Q ss_pred ecC------CCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEE
Q 011924 344 CGH------LDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 417 (475)
Q Consensus 344 ~~h------~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iw 417 (475)
... ...|.++...+++..|..|.. +-+..+|... .+...........|.++...++|.+.+.. .. -+.++
T Consensus 181 ~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~ 256 (758)
T 3ott_A 181 PLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST-GQIKQTEAFHNNSIKSLALDGNGDLLAGT-DN-GLYVY 256 (758)
T ss_dssp CCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT-TEEEEEEEEEEEEEEEEEECTTCCEEEEE-TT-EEEEE
T ss_pred cCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC-CeEEeccCCCCCeEEEEEEcCCCCEEEEe-CC-ceeEE
Confidence 211 224888888877765555554 4578888754 33221111123468888888888765544 44 48889
Q ss_pred ECCCCeeEEEEec--------cCCCeEEEEEcCCCCeEEEEEec
Q 011924 418 DVKSGYEKEQEID--------FFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 418 d~~~~~~~~~~~~--------~~~~i~~l~fspdg~~l~~~~~D 453 (475)
+..++... .+.. ....|.++....+|. |.+|...
T Consensus 257 ~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~ 298 (758)
T 3ott_A 257 HNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDY 298 (758)
T ss_dssp CCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESS
T ss_pred ecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCC
Confidence 97765432 2211 123588888887775 5555543
No 345
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.54 E-value=11 Score=41.68 Aligned_cols=226 Identities=11% Similarity=0.082 Sum_probs=121.1
Q ss_pred eEEEEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCC-----CeEEEEEeC-CCeEEEEEC
Q 011924 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSG-----AVHFTASNN-DCGVRDFDM 264 (475)
Q Consensus 191 ~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g-----~~~l~s~s~-dg~v~iwd~ 264 (475)
.|...+.++..++.+. .+.+.++.++....... ....-...|.|+++ .|.+ ..+++.|.+ |++|+|+++
T Consensus 515 ~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~--~~~~l~~evscl~i--~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 515 NISVASCNSSQVVVAV-GRALYYLQIHPQELRQI--SHTEMEHEVACLDI--TPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEE--EEEECSSCEEEEEC--CCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred EEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeee--cccCCCCceEEEEe--ecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 5666677666666664 67888888775332211 11223456899988 5432 235788886 999999999
Q ss_pred CCCeeeeeeeccc--cEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEEC--CCCceE
Q 011924 265 GKYQLSKHFRFPW--PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDS--MTGKTI 340 (475)
Q Consensus 265 ~~~~~~~~~~~~~--~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~--~~~~~~ 340 (475)
...+.+.....+. ... .+.-+.+ ....+|.+|-.||.+.-+.+ .+|...
T Consensus 590 ~~l~~~~~~~L~~~~~p~--------------------------si~l~~~-~~~~~L~igl~dG~l~~~~~d~~tg~l~ 642 (1158)
T 3ei3_A 590 PSFELLHKEMLGGEIIPR--------------------------SILMTTF-ESSHYLLCALGDGALFYFGLNIETGLLS 642 (1158)
T ss_dssp TTCCEEEEEECCSSCCEE--------------------------EEEEEEE-TTEEEEEEEETTSEEEEEEECTTTCCEE
T ss_pred CCCCeEEEEECCCCCCCc--------------------------EEEEEEe-CCCcEEEEEeCCCeEEEEEEcCCCCccc
Confidence 8766554333211 111 0001223 23456788888998765544 455543
Q ss_pred EE---eecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCce-EEEEEccCC--CEEEEEcCCCeE
Q 011924 341 AS---LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAI-RSIRYTSDG--RYMATAEPADFV 414 (475)
Q Consensus 341 ~~---l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v-~~l~~spdg--~~la~~~~dg~i 414 (475)
.. .-| ..++.=..+...+..-+-+..+....++--. ++.... .-....+ ....|+... .-++..+ ++.+
T Consensus 643 d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~--~~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~~-~~~L 717 (1158)
T 3ei3_A 643 DRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN--HKLVFS-NVNLKEVNYMCPLNSDGYPDSLALAN-NSTL 717 (1158)
T ss_dssp EEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS--SSEEEE-EBSSSCCCEEEEECCSSSTTEEEEEC-SSCE
T ss_pred cceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC--CceEEe-ccChHHhceEeccCcccCCCcEEEEc-CCce
Confidence 22 223 2344333343344333333344555555543 232211 1122223 234454322 2344444 3459
Q ss_pred EEEECCCCee-EEEEeccCCCeEEEEEcCCCCeEEEEEec
Q 011924 415 HVYDVKSGYE-KEQEIDFFGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 415 ~iwd~~~~~~-~~~~~~~~~~i~~l~fspdg~~l~~~~~D 453 (475)
+|..+.+... ..........+..++++|..+.++++..+
T Consensus 718 rI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~ 757 (1158)
T 3ei3_A 718 TIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSR 757 (1158)
T ss_dssp EEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEE
T ss_pred EEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEe
Confidence 9988754322 22223345678999999998888777654
No 346
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.15 E-value=9.6 Score=39.89 Aligned_cols=252 Identities=11% Similarity=0.049 Sum_probs=134.2
Q ss_pred EecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecCceEEEEeCC
Q 011924 138 WATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLD 217 (475)
Q Consensus 138 ~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~dg~i~vw~~~ 217 (475)
.......|++.....+..++..+.+... +.. .....|.++...+..|..|+.+ .|..++..
T Consensus 69 ~~d~~g~lWigT~~Gl~~yd~~~~~f~~---------~~~---------~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~ 129 (758)
T 3ott_A 69 VIIDNTYLYMGTDNGILVYNYRADRYEQ---------PET---------DFPTDVRTMALQGDTLWLGALN-GLYTYQLQ 129 (758)
T ss_dssp EEETTTEEEEEETTEEEEEETTTTEECC---------CSC---------CCCSCEEEEEEETTEEEEEETT-EEEEEETT
T ss_pred EEcCCCcEEEEeCCCeEEEeCCCCEEEC---------ccc---------CCCceEEEEEecCCcEEEEcCC-cceeEeCC
Confidence 3445567777777778888876543211 000 0112466665545566666666 57778876
Q ss_pred CCCceEEEeee-cCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeecc-------ccEEeccCCceEE
Q 011924 218 RPGVSFCSRTT-YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP-------WPVNVSSSYCIIL 289 (475)
Q Consensus 218 ~~~~~~~~~~~-~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-------~~v~~s~~~~~l~ 289 (475)
........... .-....|.++.. .++|.. . .++. +.|..++..+++... +..+ ..|.
T Consensus 130 ~~~~~~~~~~~~~l~~~~i~~i~~--d~~g~l-W-igt~-~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~--------- 194 (758)
T 3ott_A 130 SRKLTSFDTRRNGLPNNTIYSIIR--TKDNQI-Y-VGTY-NGLCRYIPSNGKFEG-IPLPVHSSQSNLFVN--------- 194 (758)
T ss_dssp TCCEEEECHHHHCCSCSCEEEEEE--CTTCCE-E-EEET-TEEEEEETTTTEEEE-ECCCCCTTCSSCCEE---------
T ss_pred CCeEEEeccCCCCcCCCeEEEEEE--cCCCCE-E-EEeC-CCHhhCccCCCceEE-ecCCCccccccceeE---------
Confidence 54322110000 112234666666 677763 3 3444 457788887665432 2211 1244
Q ss_pred EEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCCCceEEEeecCCCCeEEEEEecCCCEEEEEeCCC
Q 011924 290 LCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDK 369 (475)
Q Consensus 290 ~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg 369 (475)
++...+++..|.+|+. +-+..++..+++...........|.++...++|.+.+. +..
T Consensus 195 --------------------~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~- 251 (758)
T 3ott_A 195 --------------------SLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDN- 251 (758)
T ss_dssp --------------------EEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETT-
T ss_pred --------------------EEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCC-
Confidence 7777777765555654 45888998776543211112345888888878775554 444
Q ss_pred eEEEEECCCCCceEEEEec--------CCCceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEec-----cCCCeE
Q 011924 370 TCRIWDLRNLSESVAVLKG--------NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID-----FFGEIS 436 (475)
Q Consensus 370 ~v~iwd~~~~~~~~~~~~~--------~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~i~ 436 (475)
-+.+++... .. ...+.. ....|.++....+|.+-+ |+..| +.++............. ....|.
T Consensus 252 Gl~~~~~~~-~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~ 327 (758)
T 3ott_A 252 GLYVYHNDT-TP-LQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLSRYNSALQFIPISQITGTGDGNQFY 327 (758)
T ss_dssp EEEEECCTT-SC-CEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEE
T ss_pred ceeEEecCC-Cc-EEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-ccccccCCceeEEecccCCCCCCCceEE
Confidence 478888754 22 222221 123688998888887444 44456 55543322111111100 123577
Q ss_pred EEEEcCCCCeEEEEE
Q 011924 437 GISFSPDTESLFIGV 451 (475)
Q Consensus 437 ~l~fspdg~~l~~~~ 451 (475)
++.-.++|.. .+|.
T Consensus 328 ~i~~D~~g~l-WiGt 341 (758)
T 3ott_A 328 SLFRDSKGFY-WFGG 341 (758)
T ss_dssp EEEECTTCCE-EEEE
T ss_pred EEEEcCCCCE-EEee
Confidence 7777777654 4444
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.54 E-value=2.1 Score=44.63 Aligned_cols=105 Identities=12% Similarity=0.180 Sum_probs=61.4
Q ss_pred CCcEEEEEeCC------CcEEEEECCCCceEEEeecC--CCCeEEEEEecCCCEEEEEeCCC--eEEEEECCCCCceEEE
Q 011924 316 DGKLLIIVGDN------PDGLLVDSMTGKTIASLCGH--LDFSFASAWHPNGVTFATGNQDK--TCRIWDLRNLSESVAV 385 (475)
Q Consensus 316 ~g~~l~~~~~d------g~i~iwd~~~~~~~~~l~~h--~~~v~~~~~sp~g~~l~t~s~dg--~v~iwd~~~~~~~~~~ 385 (475)
++++++.||.+ ..+.+||+.+.+-. .+..- ...-.+++.-.++++++.|+.++ .+.+||..+ .. -..
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~-~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t-~~-W~~ 527 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWS-MIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE-EI-FKD 527 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEE-ECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT-TE-EEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEE-ECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCC-Cc-eEE
Confidence 78888888743 35788998775422 22211 11112233324788888887654 689999865 32 222
Q ss_pred Eec------CCCceEEEEEccC-CCEEEEEcC--C-----CeEEEEECCCCe
Q 011924 386 LKG------NLGAIRSIRYTSD-GRYMATAEP--A-----DFVHVYDVKSGY 423 (475)
Q Consensus 386 ~~~------~~~~v~~l~~spd-g~~la~~~~--d-----g~i~iwd~~~~~ 423 (475)
+.. ......++.+..+ +++++.|+. + +.+.+||+.+..
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 221 1122234556655 677777765 2 469999998775
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.48 E-value=7.3 Score=38.22 Aligned_cols=107 Identities=14% Similarity=0.097 Sum_probs=60.2
Q ss_pred CCCeEEEEEecCCC-EEEEEeCCCeEEEEECCCC--CceEEEEec---------CCCceEEEEEccC----CCEEEEEcC
Q 011924 347 LDFSFASAWHPNGV-TFATGNQDKTCRIWDLRNL--SESVAVLKG---------NLGAIRSIRYTSD----GRYMATAEP 410 (475)
Q Consensus 347 ~~~v~~~~~sp~g~-~l~t~s~dg~v~iwd~~~~--~~~~~~~~~---------~~~~v~~l~~spd----g~~la~~~~ 410 (475)
-...+.++|.|+|. .|+++.+.|.|++++.... ..++..+.. .......|+|+|+ +.+.++-+.
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 34578899999986 4555668899999975321 122232221 1346788999996 443333221
Q ss_pred --C----------CeEEEEECCCC----------eeEEEEec--cCCCeEEEEEcCCCCeEEEEEecC
Q 011924 411 --A----------DFVHVYDVKSG----------YEKEQEID--FFGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 411 --d----------g~i~iwd~~~~----------~~~~~~~~--~~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
+ ..|.-|.+..+ +.+..+.. .......|+|.|||. |+++..|+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCC
Confidence 1 13444655421 22222221 112467899999994 55555554
No 349
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.21 E-value=13 Score=35.30 Aligned_cols=137 Identities=7% Similarity=-0.100 Sum_probs=68.4
Q ss_pred eEEECC-C-CcEEEEEeCCCcEEEEECCCCceEEEeec-------------------CCCCeEEEEEec-CCCEEEEEeC
Q 011924 310 HSSQSP-D-GKLLIIVGDNPDGLLVDSMTGKTIASLCG-------------------HLDFSFASAWHP-NGVTFATGNQ 367 (475)
Q Consensus 310 ~~~~sp-~-g~~l~~~~~dg~i~iwd~~~~~~~~~l~~-------------------h~~~v~~~~~sp-~g~~l~t~s~ 367 (475)
++++.| + ...+.+++..+.|...+ ..|+....+.. ....+.++.++| +...|+.+..
T Consensus 119 ~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~ 197 (394)
T 3b7f_A 119 WLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS 197 (394)
T ss_dssp EEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE
T ss_pred EEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC
Confidence 788887 2 45566665555554442 33444333321 123578899998 3444555544
Q ss_pred CCeEEEEECCCCCceEEEEecC-------------CCceEEEEEccC-CCEEEEEcCCCeEEEEECCCCeeEEEEec-cC
Q 011924 368 DKTCRIWDLRNLSESVAVLKGN-------------LGAIRSIRYTSD-GRYMATAEPADFVHVYDVKSGYEKEQEID-FF 432 (475)
Q Consensus 368 dg~v~iwd~~~~~~~~~~~~~~-------------~~~v~~l~~spd-g~~la~~~~dg~i~iwd~~~~~~~~~~~~-~~ 432 (475)
.+.|... ...++.-..+... ...+.+++++|. ...|.++...+ |...+- .+..-..+.. ..
T Consensus 198 ~ggl~~s--~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~ 273 (394)
T 3b7f_A 198 SGGVFES--TDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMP 273 (394)
T ss_dssp TBEEEEE--SSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSC
T ss_pred CCCEEEE--CCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCC
Confidence 4433333 2223322222110 124889999985 35666666544 555442 2322222211 11
Q ss_pred ----CCeEEEEEcC-CCCeEEEEE
Q 011924 433 ----GEISGISFSP-DTESLFIGV 451 (475)
Q Consensus 433 ----~~i~~l~fsp-dg~~l~~~~ 451 (475)
..+..++++| +...|+++.
T Consensus 274 ~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 274 REVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp TTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CCCccceEEEEECCCCCCEEEEEe
Confidence 2356788887 345566654
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.58 E-value=0.82 Score=42.92 Aligned_cols=111 Identities=11% Similarity=-0.049 Sum_probs=69.0
Q ss_pred cEEEEEeCCCcEEEEECCCCceEEEeecC-CCCeEEEEEe--cCCCEEEEE--eCCCeEEEEECCCCCceEEEEec----
Q 011924 318 KLLIIVGDNPDGLLVDSMTGKTIASLCGH-LDFSFASAWH--PNGVTFATG--NQDKTCRIWDLRNLSESVAVLKG---- 388 (475)
Q Consensus 318 ~~l~~~~~dg~i~iwd~~~~~~~~~l~~h-~~~v~~~~~s--p~g~~l~t~--s~dg~v~iwd~~~~~~~~~~~~~---- 388 (475)
.++++++.||.|+-+|..+|+...+++.. ..++....-. +.+..++.+ +.||.|..++..+ +.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~-G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ-GLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT-EEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC-CcEEeeeccccce
Confidence 47888999999999999999999888754 1222221100 112234433 5799999999865 432222221
Q ss_pred CCCceEE---EEE-c----cCCCEEEEEcCCCeEEEEECCCCeeEEEEe
Q 011924 389 NLGAIRS---IRY-T----SDGRYMATAEPADFVHVYDVKSGYEKEQEI 429 (475)
Q Consensus 389 ~~~~v~~---l~~-s----pdg~~la~~~~dg~i~iwd~~~~~~~~~~~ 429 (475)
...++.. ... . ..+..+++|+.++.+...|+++|+.+.++.
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1112211 001 0 134578899999999999999999887765
No 351
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=87.27 E-value=20 Score=33.93 Aligned_cols=170 Identities=8% Similarity=0.042 Sum_probs=97.5
Q ss_pred eEEEEECCCC--eeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEEC---CC----CcEEEEEe-CCC
Q 011924 258 GVRDFDMGKY--QLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQS---PD----GKLLIIVG-DNP 327 (475)
Q Consensus 258 ~v~iwd~~~~--~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~s---p~----g~~l~~~~-~dg 327 (475)
.|.+||+.+. ++++.+..+..+.- .+..+. .+++. |. +.++.++. ..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~--~~S~l~--------------------di~VD~~~~~~~c~~~~aYItD~~~~ 181 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVE--KPTYFG--------------------GFAVDVANPKGDCSETFVYITNFLRG 181 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCC--CGGGEE--------------------EEEEEESCTTTTSCSEEEEEEETTTT
T ss_pred eEEEEECCCCCceeEEEEECCHHhcc--cCCccc--------------------eEEEecccCCCCCCccEEEEEcCCCC
Confidence 4667888888 88888775543321 011111 44444 22 33443333 356
Q ss_pred cEEEEECCCCceEEEeec----C--------------CCCeEEEEEecC----CCEEEEEeCCCeEEEEECC-----C--
Q 011924 328 DGLLVDSMTGKTIASLCG----H--------------LDFSFASAWHPN----GVTFATGNQDKTCRIWDLR-----N-- 378 (475)
Q Consensus 328 ~i~iwd~~~~~~~~~l~~----h--------------~~~v~~~~~sp~----g~~l~t~s~dg~v~iwd~~-----~-- 378 (475)
.|.++|+.+++..+.+.. . ...+..++++|+ ++.|+-..-.+ -++|-+. +
T Consensus 182 gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~ 260 (381)
T 3q6k_A 182 ALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKG 260 (381)
T ss_dssp EEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTT
T ss_pred cEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcc
Confidence 799999998877665521 0 246888999997 77777776554 2344332 1
Q ss_pred CCceEEEEecC--CCceEEEEEc-cCCCEEEEEcCCCeEEEEECCC-Ce---eEEEE-ec-cCCCeEEEEEcCCCCeEEE
Q 011924 379 LSESVAVLKGN--LGAIRSIRYT-SDGRYMATAEPADFVHVYDVKS-GY---EKEQE-ID-FFGEISGISFSPDTESLFI 449 (475)
Q Consensus 379 ~~~~~~~~~~~--~~~v~~l~~s-pdg~~la~~~~dg~i~iwd~~~-~~---~~~~~-~~-~~~~i~~l~fspdg~~l~~ 449 (475)
....++.+... .+.-..+++. .+|.++++--..+.|..|+..+ .. ....+ .. ....+.++.+.++|...+.
T Consensus 261 ~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~ 340 (381)
T 3q6k_A 261 GKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFM 340 (381)
T ss_dssp CCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEE
T ss_pred hhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEE
Confidence 11223333221 1233456775 6787777777788999999876 22 11222 22 2235788888888864444
Q ss_pred E
Q 011924 450 G 450 (475)
Q Consensus 450 ~ 450 (475)
+
T Consensus 341 s 341 (381)
T 3q6k_A 341 S 341 (381)
T ss_dssp E
T ss_pred E
Confidence 3
No 352
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=85.20 E-value=3 Score=42.26 Aligned_cols=61 Identities=25% Similarity=0.407 Sum_probs=45.1
Q ss_pred ceEEEEEccCCCEEEEEcC------------CCeEEEEECCCCeeEEEEecc-CCCeEEEEEcCCCCeEEEEEe
Q 011924 392 AIRSIRYTSDGRYMATAEP------------ADFVHVYDVKSGYEKEQEIDF-FGEISGISFSPDTESLFIGVW 452 (475)
Q Consensus 392 ~v~~l~~spdg~~la~~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~i~~l~fspdg~~l~~~~~ 452 (475)
..-.|+|+|.|+++++-.. ++.+.+.+..+++..+.+... ..++++++|+||++.|++...
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 3457999999996665432 235777787778766555554 468999999999999999854
No 353
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=83.46 E-value=25 Score=31.63 Aligned_cols=213 Identities=15% Similarity=0.045 Sum_probs=104.1
Q ss_pred EecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEE-cCcEEEEEecCceEEEEeC
Q 011924 138 WATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-KDKLLVAGGFQGELICKHL 216 (475)
Q Consensus 138 ~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~lvsg~~dg~i~vw~~ 216 (475)
.+...+.+.+. ++.++.|-.......- + |. .....|..++. ....++. . +|.|+.|-.
T Consensus 30 a~G~~h~~~l~-~G~v~~wG~n~~Gqlg-------~------p~-----~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~ 88 (282)
T 3qhy_B 30 AGGYFHGLALK-GGKVLGWGANLNGQLT-------M------PA-----ATQSGVDAIAAGNYHSLAL-K-DGEVIAWGG 88 (282)
T ss_dssp EECSSEEEEEE-TTEEEEEECCSSSTTS-------C------CG-----GGGSCCCEEEECSSEEEEE-E-TTEEEEEEC
T ss_pred EeCCCeEEEEE-CCEEEEEeCCCCCCCC-------C------Cc-----cCCCCEEEEEeCCCEEEEE-E-CCEEEEeeC
Confidence 44445555555 8999999743321110 0 00 11235777888 4444444 4 999999986
Q ss_pred CCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC-CeeeeeeeccccEEeccCCceEEEEEEee
Q 011924 217 DRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQLSKHFRFPWPVNVSSSYCIILLCRLLN 295 (475)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~-~~~~~~~~~~~~v~~s~~~~~l~~~~v~d 295 (475)
...+..- +...-...|..|+. .. . ..++-. +|.|..|-... +++-........+.
T Consensus 89 n~~Gqlg---~P~~~~~~v~~ia~--G~--~-hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~--------------- 144 (282)
T 3qhy_B 89 NEDGQTT---VPAEARSGVDAIAA--GA--W-ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVT--------------- 144 (282)
T ss_dssp CTTSTTC---CCGGGSSSEEEEEE--ET--T-EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEE---------------
T ss_pred CCCCCCC---CCcccCCCeEEEEC--cC--C-EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeE---------------
Confidence 6543221 00111234555554 22 2 233344 99999997654 22211111222333
Q ss_pred cccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCC-CceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEE
Q 011924 296 FMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMT-GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 374 (475)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iw 374 (475)
.++.... ..++.. +|.++.|-... ++.- .-..-...|..++.... ..++. .+|.|..|
T Consensus 145 --------------~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~-hs~al--~~G~v~~w 203 (282)
T 3qhy_B 145 --------------ALDGGVY--TALAVK-NGGVIAWGDNYFGQTT-VPAEAQSGVDDVAGGIF-HSLAL--KDGKVIAW 203 (282)
T ss_dssp --------------EEEECSS--EEEEEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSS-EEEEE--ETTEEEEE
T ss_pred --------------EEEcccC--EEEEEE-CCEEEEecCCCCCCCC-CceecCCCeEEEEecCC-EEEEE--ECCeEEEE
Confidence 4443332 222233 68888886542 2211 00111245666665443 23333 58999999
Q ss_pred ECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECC
Q 011924 375 DLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420 (475)
Q Consensus 375 d~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~ 420 (475)
=....++.-... .....|..++...... ++.. +|.|..|=..
T Consensus 204 G~n~~gqlg~p~-~~~~~v~~i~~G~~h~-~al~--~g~v~~wG~n 245 (282)
T 3qhy_B 204 GDNRYKQTTVPT-EALSGVSAIASGEWYS-LALK--NGKVIAWGSS 245 (282)
T ss_dssp ECCTTSTTCCCG-GGGSSCCEEEECSSCE-EEEE--TTEEEEESTT
T ss_pred ECCCCCCCCCCc-ccCCCceEEEcCCCEE-EEEE--CCEEEEecCC
Confidence 764433321111 1123566666554332 3333 8888888643
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=80.95 E-value=7.7 Score=38.91 Aligned_cols=62 Identities=24% Similarity=0.402 Sum_probs=45.4
Q ss_pred ceEEEEEccCCCEEEEEcC------------CCeEEEEECCCCeeEEEEecc-CCCeEEEEEcCCCCeEEEEEec
Q 011924 392 AIRSIRYTSDGRYMATAEP------------ADFVHVYDVKSGYEKEQEIDF-FGEISGISFSPDTESLFIGVWD 453 (475)
Q Consensus 392 ~v~~l~~spdg~~la~~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~i~~l~fspdg~~l~~~~~D 453 (475)
....|.|+++|.+.++... .+.|..++..+++....+... ..++++++||||++.|+++...
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 4568999999987663321 236777787778765555433 4679999999999999999754
No 355
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=80.53 E-value=39 Score=31.89 Aligned_cols=202 Identities=11% Similarity=0.020 Sum_probs=97.1
Q ss_pred eeEEEEEEcCcEEEEEecCceEEEEeCCCCC--------c-eEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEE
Q 011924 190 TQVSTLAVKDKLLVAGGFQGELICKHLDRPG--------V-SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVR 260 (475)
Q Consensus 190 ~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~--------~-~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~ 260 (475)
..|..++......++-..+|.|+.|-....+ . .....+..-....+..+++ +..... .++-..+|.|.
T Consensus 53 ~~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i--~~G~~h-~~al~~~G~v~ 129 (389)
T 3kci_A 53 LRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--NSGGKH-CLALSSEGEVY 129 (389)
T ss_dssp TCEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEE--CTTCSE-EEEEETTSCEE
T ss_pred CceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEE--CcCCCe-EEEEcCCCCEE
Confidence 3566777766666666789999999654321 1 1111121222233455666 555444 55556899999
Q ss_pred EEECCCCeeee-----eeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECC
Q 011924 261 DFDMGKYQLSK-----HFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSM 335 (475)
Q Consensus 261 iwd~~~~~~~~-----~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~ 335 (475)
.|-......+. ....+..+. ...+. . -+.++......++...+|.|+.|=..
T Consensus 130 ~wG~n~~GqLG~g~~~~~~~p~~v~---------------~l~~~------~--i~~va~G~~hs~alt~~G~v~~wG~n 186 (389)
T 3kci_A 130 SWGEAEDGKLGHGNRSPCDRPRVIE---------------SLRGI------E--VVDVAAGGAHSACVTAAGDLYTWGKG 186 (389)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECG---------------GGTTS------C--EEEEEECSSEEEEEETTSCEEEEECC
T ss_pred EEeCCCCCcCCCCCCccCcCCeEec---------------ccCCC------e--EEEEEeCcCeEEEEeCCCeEEEeCCC
Confidence 99764311110 000000000 00000 0 11233334455556678888888643
Q ss_pred C-Cc----------eEEEeec-CCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCCCc----------eEEEEec-CCCc
Q 011924 336 T-GK----------TIASLCG-HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE----------SVAVLKG-NLGA 392 (475)
Q Consensus 336 ~-~~----------~~~~l~~-h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~----------~~~~~~~-~~~~ 392 (475)
. |+ ....+.. ....|..++........+.-..+|.|..|-....++ ....+.. ....
T Consensus 187 ~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~ 266 (389)
T 3kci_A 187 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 266 (389)
T ss_dssp GGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSC
T ss_pred CCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCc
Confidence 1 11 1111111 123466666544334566667889999996432111 1111111 1123
Q ss_pred eEEEEEccCCCEEEEEcCCCeEEEEEC
Q 011924 393 IRSIRYTSDGRYMATAEPADFVHVYDV 419 (475)
Q Consensus 393 v~~l~~spdg~~la~~~~dg~i~iwd~ 419 (475)
|..++... .+.++-..+|.|..|=.
T Consensus 267 v~~v~~G~--~hs~alt~~G~v~~wG~ 291 (389)
T 3kci_A 267 VVKVECGS--QFSVALTKSGAVYTWGK 291 (389)
T ss_dssp EEEEEEET--TEEEEEETTSCEEEEEC
T ss_pred EEEEeCCC--CEEEEEeCCCeEEEEeC
Confidence 55555443 34444456777777753
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=78.44 E-value=52 Score=32.07 Aligned_cols=113 Identities=13% Similarity=0.059 Sum_probs=56.1
Q ss_pred eEEEEEecC-----CCE-EEEEeCCC----eEEEEECCCC-----CceEEEEecCC-CceEEEEEcc-------CCCEEE
Q 011924 350 SFASAWHPN-----GVT-FATGNQDK----TCRIWDLRNL-----SESVAVLKGNL-GAIRSIRYTS-------DGRYMA 406 (475)
Q Consensus 350 v~~~~~sp~-----g~~-l~t~s~dg----~v~iwd~~~~-----~~~~~~~~~~~-~~v~~l~~sp-------dg~~la 406 (475)
...++|+|. |.+ +..+...| .-.|..+... ..++..+..+. .++..+.|-. .|.+|+
T Consensus 219 p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~ 298 (463)
T 2wg3_C 219 PGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVF 298 (463)
T ss_dssp CCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEE
T ss_pred cceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEE
Confidence 456899996 443 43332112 1234443221 13555555332 4677888743 234554
Q ss_pred EEcCCCeEEEEECCCCe---eEEEE-e--------ccCCCeEEEEEcCCCCeEEEEEec----CCcceEEEEE
Q 011924 407 TAEPADFVHVYDVKSGY---EKEQE-I--------DFFGEISGISFSPDTESLFIGVWD----RTYGSLLEYG 463 (475)
Q Consensus 407 ~~~~dg~i~iwd~~~~~---~~~~~-~--------~~~~~i~~l~fspdg~~l~~~~~D----~~~~~ll~~~ 463 (475)
+...+.|....+.... ....+ . ...+.+.++.+.|||..+++.... ..-+.++...
T Consensus 299 -~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 299 -GDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp -EETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred -ecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEec
Confidence 4444666666654321 11112 1 123679999999999877766421 2345666665
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.34 E-value=74 Score=34.26 Aligned_cols=31 Identities=13% Similarity=0.129 Sum_probs=25.6
Q ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeeeeeee
Q 011924 243 SPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR 274 (475)
Q Consensus 243 s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 274 (475)
.++... +++-+.|+++|+|++.+++++.+..
T Consensus 244 ~~~~~~-lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 244 LSTYNV-LVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp ETTTTE-EEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCCcE-EEEEECCCEEEEEECCCCCeEeeec
Confidence 566665 7777899999999999999988765
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=70.85 E-value=70 Score=29.99 Aligned_cols=129 Identities=10% Similarity=-0.022 Sum_probs=63.9
Q ss_pred eEEECCC-CcEEEEEeCCCcEEEEECCCCceEEEeec--CC---CCeEEEEEec-CCCEEEEEeC-----------CCeE
Q 011924 310 HSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCG--HL---DFSFASAWHP-NGVTFATGNQ-----------DKTC 371 (475)
Q Consensus 310 ~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~~~~~l~~--h~---~~v~~~~~sp-~g~~l~t~s~-----------dg~v 371 (475)
++++.|. ...|.++...+ |+..+ ..|+....+.. .. ..+++++++| +...|..+.. ++..
T Consensus 236 ~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~ 313 (394)
T 3b7f_A 236 CVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKP 313 (394)
T ss_dssp EEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSC
T ss_pred EEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCce
Confidence 8888885 45666665544 44443 33444444331 11 3467888887 4444554432 3334
Q ss_pred EEEECCCCCceEEEEec-CC--C----c-eEEEEEccC-CCEEEEEcCCCeEEEEECCCCeeEEEEeccCCCeEEEEEc
Q 011924 372 RIWDLRNLSESVAVLKG-NL--G----A-IRSIRYTSD-GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFS 441 (475)
Q Consensus 372 ~iwd~~~~~~~~~~~~~-~~--~----~-v~~l~~spd-g~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~l~fs 441 (475)
.||.....++.-..+.. -. . . ...++++|. ...|+.++..+.|..-. ..|..-..+......+.++.|.
T Consensus 314 ~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 314 AVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp CEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred eEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 56665543443333321 11 0 1 135788874 34566666555554332 2333333333333456666663
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=69.14 E-value=1.3e+02 Score=32.38 Aligned_cols=37 Identities=16% Similarity=0.066 Sum_probs=32.1
Q ss_pred ceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEE
Q 011924 392 AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE 428 (475)
Q Consensus 392 ~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~ 428 (475)
.+.+++..++..+|++-+.|+++|||++.++.++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5667788888899999999999999999999887664
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=67.85 E-value=83 Score=29.69 Aligned_cols=190 Identities=11% Similarity=0.054 Sum_probs=103.9
Q ss_pred eEEEEeCCCC--CceEEEeee---cCCCCceeEEEEE-eCCC----CCeEEEEEeCCCeEEEEECCCCeeeeeeeccccE
Q 011924 210 ELICKHLDRP--GVSFCSRTT---YDDNAITNAVEIY-GSPS----GAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPV 279 (475)
Q Consensus 210 ~i~vw~~~~~--~~~~~~~~~---~~~~~~v~~l~~~-~s~~----g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v 279 (475)
+|.+||+.+. +......+. ....+..+.+.+. ..|. +.+..++-+....|.|+|+.+++..+... ..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~-~~-- 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH-PT-- 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC-GG--
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc-CC--
Confidence 5677777776 444322221 1124567888885 2232 34445565667899999999988776553 11
Q ss_pred EeccCCceEEEEEEeecccceEEEEeeeeeeEEECCC----CcEEEEEeCCC-cEEEEE---CCCC---ceEEEee--cC
Q 011924 280 NVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPD----GKLLIIVGDNP-DGLLVD---SMTG---KTIASLC--GH 346 (475)
Q Consensus 280 ~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~----g~~l~~~~~dg-~i~iwd---~~~~---~~~~~l~--~h 346 (475)
|.|+.. .. +. ..|+.......+..++++|+ ++.|....-.+ .++-.. ++.. ..+..+- +.
T Consensus 201 -~~pd~~--~~---~~-i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~ 273 (381)
T 3q6k_A 201 -FKAERP--TK---FD-YGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGK 273 (381)
T ss_dssp -GSCCSC--EE---EE-ETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCT
T ss_pred -CccccC--cc---eE-ECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCC
Confidence 122100 00 00 12333333446779999998 77777765443 333332 1222 2222221 11
Q ss_pred CCCeEEEEEe-cCCCEEEEEeCCCeEEEEECCC-CC--ceEEEEec--CCCceEEEEEccCCCEEEEEc
Q 011924 347 LDFSFASAWH-PNGVTFATGNQDKTCRIWDLRN-LS--ESVAVLKG--NLGAIRSIRYTSDGRYMATAE 409 (475)
Q Consensus 347 ~~~v~~~~~s-p~g~~l~t~s~dg~v~iwd~~~-~~--~~~~~~~~--~~~~v~~l~~spdg~~la~~~ 409 (475)
......++.. .+|.++++--....|..|+... .- .....+.. ....+..+++.++|.+.+++.
T Consensus 274 ~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 274 YNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp TCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred CCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 2334456776 5788888888888999999864 11 12222221 223567788877776555554
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.18 E-value=1.4e+02 Score=32.73 Aligned_cols=38 Identities=16% Similarity=0.041 Sum_probs=31.4
Q ss_pred ceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEe
Q 011924 392 AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI 429 (475)
Q Consensus 392 ~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~ 429 (475)
.+.+++..++..+|++-+.|++++||++.++.++.+.-
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34456677788999999999999999999998877643
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=63.63 E-value=23 Score=35.84 Aligned_cols=58 Identities=21% Similarity=0.248 Sum_probs=42.3
Q ss_pred eEEECCCCcEEEEEeCC------------CcEEEEECCCCceEEEeecCC-CCeEEEEEecCCCEEEEEeC
Q 011924 310 HSSQSPDGKLLIIVGDN------------PDGLLVDSMTGKTIASLCGHL-DFSFASAWHPNGVTFATGNQ 367 (475)
Q Consensus 310 ~~~~sp~g~~l~~~~~d------------g~i~iwd~~~~~~~~~l~~h~-~~v~~~~~sp~g~~l~t~s~ 367 (475)
.|+|+|.|++++.-..+ ..+.+.+..+++..+.+.++. ..++.++|+||++.|...-|
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 78999999966654321 245666777788777776654 57889999999988877644
No 363
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=61.51 E-value=1.5e+02 Score=30.59 Aligned_cols=99 Identities=10% Similarity=-0.085 Sum_probs=54.4
Q ss_pred eEEECCC-CcEEEEEeCCCcEEEEECCCCceEEEeecCC-------CCeEEEEEec-CCCEEEEEeCC-------CeEEE
Q 011924 310 HSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCGHL-------DFSFASAWHP-NGVTFATGNQD-------KTCRI 373 (475)
Q Consensus 310 ~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~~~~~l~~h~-------~~v~~~~~sp-~g~~l~t~s~d-------g~v~i 373 (475)
.++++|. ...+.++...+.|+..+ ..|+....+..+. ..+.+++++| +.+.++.+... +...|
T Consensus 27 ~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l 105 (737)
T 2cn3_A 27 GIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAI 105 (737)
T ss_dssp EEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEE
T ss_pred EEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccE
Confidence 8999995 35566666666666554 3455555544321 3588999998 44444444321 12456
Q ss_pred EECCCCCceEEEEec-C--------CCceEEEEEccC-CCEEEEEc
Q 011924 374 WDLRNLSESVAVLKG-N--------LGAIRSIRYTSD-GRYMATAE 409 (475)
Q Consensus 374 wd~~~~~~~~~~~~~-~--------~~~v~~l~~spd-g~~la~~~ 409 (475)
|-....++.-..+.. . ...+..++++|. ...|+++.
T Consensus 106 ~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 106 LRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp EEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred EEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 655443443222221 1 012467999984 35566665
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=60.52 E-value=93 Score=27.75 Aligned_cols=180 Identities=8% Similarity=-0.088 Sum_probs=87.8
Q ss_pred eEEEEEEcCcEEEEEecCceEEEEeCCCCCceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeee
Q 011924 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (475)
Q Consensus 191 ~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~ 270 (475)
.|..++......++-. +|.|+.|-....+..- ........|..|+. .. ...++. . ||.|..|-......+
T Consensus 25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg---~p~~~~~~i~~ia~--G~--~hs~~l-~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLT---MPAATQSGVDAIAA--GN--YHSLAL-K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTS---CCGGGGSCCCEEEE--CS--SEEEEE-E-TTEEEEEECCTTSTT
T ss_pred CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCC---CCccCCCCEEEEEe--CC--CEEEEE-E-CCEEEEeeCCCCCCC
Confidence 5777888333333335 9999999866544221 11111224555655 22 222333 4 899999976542211
Q ss_pred ee-eeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCC-CceEEEeecCCC
Q 011924 271 KH-FRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMT-GKTIASLCGHLD 348 (475)
Q Consensus 271 ~~-~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~-~~~~~~l~~h~~ 348 (475)
.. ......+. .++... ...++.. +|.|+.|=... +++- .-.....
T Consensus 95 g~P~~~~~~v~-----------------------------~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg-~~~~~~~ 141 (282)
T 3qhy_B 95 TVPAEARSGVD-----------------------------AIAAGA--WASYALK-DGKVIAWGDDSDGQTT-VPAEAQS 141 (282)
T ss_dssp CCCGGGSSSEE-----------------------------EEEEET--TEEEEEE-TTEEEEEECCTTSTTS-CCGGGGS
T ss_pred CCCcccCCCeE-----------------------------EEECcC--CEEEEEe-CCeEEEecCCCCCcCC-CCccCCC
Confidence 11 00112333 444433 2333344 88888886543 2211 0111223
Q ss_pred CeEEEEEecCCCEEEEEeCCCeEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECC
Q 011924 349 FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420 (475)
Q Consensus 349 ~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~ 420 (475)
.|..++....- .+.-. +|.|..|-....++.-.. ......|..++.... +.+.- .+|.|..|=..
T Consensus 142 ~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg~p-~~~~~~v~~i~~G~~--hs~al-~~G~v~~wG~n 206 (282)
T 3qhy_B 142 GVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTTVP-AEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDN 206 (282)
T ss_dssp SEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSS--EEEEE-ETTEEEEEECC
T ss_pred CeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCCCc-eecCCCeEEEEecCC--EEEEE-ECCeEEEEECC
Confidence 46666554332 22233 788999976543332110 111235666666543 22223 48888888643
No 365
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=59.68 E-value=32 Score=34.50 Aligned_cols=59 Identities=22% Similarity=0.218 Sum_probs=42.8
Q ss_pred eeEEECCCCcEEEEEeC------------CCcEEEEECCCCceEEEeecC-CCCeEEEEEecCCCEEEEEeC
Q 011924 309 QHSSQSPDGKLLIIVGD------------NPDGLLVDSMTGKTIASLCGH-LDFSFASAWHPNGVTFATGNQ 367 (475)
Q Consensus 309 ~~~~~sp~g~~l~~~~~------------dg~i~iwd~~~~~~~~~l~~h-~~~v~~~~~sp~g~~l~t~s~ 367 (475)
..+.|+++|.+.++... ...++.++..+|+....+.+. ...++.++|+||+++|+++-+
T Consensus 479 DnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 37899999987774321 125777777788876666543 356899999999998888754
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.28 E-value=42 Score=37.03 Aligned_cols=31 Identities=13% Similarity=0.129 Sum_probs=25.4
Q ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeeeeeee
Q 011924 243 SPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR 274 (475)
Q Consensus 243 s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 274 (475)
.++... +++-+.|+++|+|++.+++++.+..
T Consensus 246 ~~~~~~-lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 246 LSTYNV-LVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp ETTTTE-EEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred cCCccE-EEEEeCCCEEEEEECCCCCeEEeec
Confidence 455554 7777899999999999999988765
No 367
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=55.14 E-value=2e+02 Score=29.99 Aligned_cols=58 Identities=10% Similarity=-0.042 Sum_probs=31.1
Q ss_pred eEEECCC-CcEEEEEeCCCcEEEEECCCCceEEEeec------CCCCeEEEEEec-CCCEEEEEeCC
Q 011924 310 HSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCG------HLDFSFASAWHP-NGVTFATGNQD 368 (475)
Q Consensus 310 ~~~~sp~-g~~l~~~~~dg~i~iwd~~~~~~~~~l~~------h~~~v~~~~~sp-~g~~l~t~s~d 368 (475)
.++++|. ...+.++...+.|. .....|+....+.. ....+..+.++| ++..++.+..+
T Consensus 125 ~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 125 RLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred EEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 5777773 45555555343332 22334554444432 124578899998 45566666554
No 368
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=51.40 E-value=2.3e+02 Score=29.55 Aligned_cols=147 Identities=12% Similarity=0.130 Sum_probs=73.0
Q ss_pred CCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeeec-------cccEEeccCCceEEEEEEeecccceEEEE
Q 011924 232 NAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF-------PWPVNVSSSYCIILLCRLLNFMTEKVIIC 304 (475)
Q Consensus 232 ~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-------~~~v~~s~~~~~l~~~~v~d~~~~~~~~~ 304 (475)
.+.|.+|.+ +|....+++++...+.|...+=........... ...+.
T Consensus 14 ~g~i~~i~~--~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~------------------------ 67 (789)
T 1sqj_A 14 GGYITGIVA--HPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTE------------------------ 67 (789)
T ss_dssp CSCEEEEEE--CSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEE------------------------
T ss_pred CCcEEEEEE--CCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCcee------------------------
Confidence 456888888 886544466666667665544211111111111 12455
Q ss_pred eeeeeeEEECCC-CcEEEEEeCCCc----EEEE-ECCCCceEEEeecC-------CC--CeEEEEEec-CCCEEEEEeCC
Q 011924 305 LLCLQHSSQSPD-GKLLIIVGDNPD----GLLV-DSMTGKTIASLCGH-------LD--FSFASAWHP-NGVTFATGNQD 368 (475)
Q Consensus 305 ~~~i~~~~~sp~-g~~l~~~~~dg~----i~iw-d~~~~~~~~~l~~h-------~~--~v~~~~~sp-~g~~l~t~s~d 368 (475)
+++++|. ...+.++..... ..|| ....|+....+... .+ .+..++++| +...++.+...
T Consensus 68 -----~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~ 142 (789)
T 1sqj_A 68 -----SIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRT 142 (789)
T ss_dssp -----EEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSS
T ss_pred -----EEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEecc
Confidence 8888884 344444432211 2333 33455554444321 11 345688888 34566666533
Q ss_pred CeEEEEECCCCCceEEEEec------CCCceEEEEEccC-CCEEEEEcCC
Q 011924 369 KTCRIWDLRNLSESVAVLKG------NLGAIRSIRYTSD-GRYMATAEPA 411 (475)
Q Consensus 369 g~v~iwd~~~~~~~~~~~~~------~~~~v~~l~~spd-g~~la~~~~d 411 (475)
+. ||-....++.-..+.. ....+..+.++|. +..|+++..+
T Consensus 143 ~g--l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 143 EG--IWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp SC--EEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred CC--EEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 32 4433333332222221 1245788999884 4455555443
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=43.92 E-value=1.9e+02 Score=26.43 Aligned_cols=190 Identities=9% Similarity=0.070 Sum_probs=100.2
Q ss_pred cCcEEEEEecCceEEEEeC---CCCC---ceEEE--ee-ecCCCCceeEEEEEeCC--CCCeEEEEEeCCCeEEEEECCC
Q 011924 198 KDKLLVAGGFQGELICKHL---DRPG---VSFCS--RT-TYDDNAITNAVEIYGSP--SGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~---~~~~---~~~~~--~~-~~~~~~~v~~l~~~~s~--~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
....|+.-+..|.++.... ...+ ..... .+ +......+..+.+ .. +... ++..+..|.++-..+..
T Consensus 52 t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~--~~~~~e~~-~v~~T~~G~iKr~~l~~ 128 (327)
T 3uc1_A 52 THDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQI--RGYTDAPY-LVLATRNGLVKKSKLTD 128 (327)
T ss_dssp TTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEE--SSTTSSSE-EEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEe--ccCCCCCE-EEEEcCCCEEEEeEHHH
Confidence 5666777777888776553 2211 01000 01 1122334444444 32 3444 88888999999988765
Q ss_pred Ceeee-------eeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECC--C-
Q 011924 267 YQLSK-------HFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSM--T- 336 (475)
Q Consensus 267 ~~~~~-------~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~--~- 336 (475)
....+ .+.....+. .+........++..+..|.+..+... .
T Consensus 129 ~~~~~r~G~~~i~lke~D~lv-----------------------------~~~~~~~~d~ill~T~~G~~~rf~~~~~ei 179 (327)
T 3uc1_A 129 FDSNRSGGIVAVNLRDNDELV-----------------------------GAVLCSAGDDLLLVSANGQSIRFSATDEAL 179 (327)
T ss_dssp GCCCCSSCEESCBCCTTCCEE-----------------------------EEEEECTTCEEEEEETTSEEEEEECCTTTS
T ss_pred hhccccCceEEEEECCCCEEE-----------------------------EEEEecCCCEEEEEECCCeEEEEECccccc
Confidence 43222 111112222 33333344567777788888777655 1
Q ss_pred ---Cc-----eEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCC------CceEEEEe--cCCCceEEEEEcc
Q 011924 337 ---GK-----TIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL------SESVAVLK--GNLGAIRSIRYTS 400 (475)
Q Consensus 337 ---~~-----~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~------~~~~~~~~--~~~~~v~~l~~sp 400 (475)
++ ....|. ..+.|.++...+.+..++..+..|.++.-.+... ++-+..+. ...+.+..+....
T Consensus 180 p~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~ 258 (327)
T 3uc1_A 180 RPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVD 258 (327)
T ss_dssp CCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEEC
T ss_pred CcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeC
Confidence 11 111222 2456777666666678999999999998876321 11222222 1123444444444
Q ss_pred CCCEEEEEcCCCeEEEEECC
Q 011924 401 DGRYMATAEPADFVHVYDVK 420 (475)
Q Consensus 401 dg~~la~~~~dg~i~iwd~~ 420 (475)
+...++..+.+|.+.-++..
T Consensus 259 ~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 259 DDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp TTCEEEEEEGGGCEEEEEGG
T ss_pred CCccEEEEcCCCeEEEEehh
Confidence 44556666667766666654
No 370
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=43.60 E-value=2.1e+02 Score=26.85 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=42.7
Q ss_pred cceeEEEEEEcCcEEEEEecCceEEEEeCCCCCc--------e-EEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCe
Q 011924 188 TQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGV--------S-FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCG 258 (475)
Q Consensus 188 ~~~~v~~l~~~~~~lvsg~~dg~i~vw~~~~~~~--------~-~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~ 258 (475)
....|..++......++-..+|.|+.|-....+. . ....+..-....|..|+. ... ..++-..+|.
T Consensus 119 ~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~----G~~-hs~alt~~G~ 193 (406)
T 4d9s_A 119 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA----GAE-HTAAVTEDGD 193 (406)
T ss_dssp TTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEE----CSS-EEEEEETTSC
T ss_pred CCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEec----CCC-eEEEEeCCCC
Confidence 3447888888666666667899999997643321 1 111111112223445544 222 3455568999
Q ss_pred EEEEECCC
Q 011924 259 VRDFDMGK 266 (475)
Q Consensus 259 v~iwd~~~ 266 (475)
|..|-...
T Consensus 194 v~~wG~n~ 201 (406)
T 4d9s_A 194 LYGWGWGR 201 (406)
T ss_dssp EEEEECCT
T ss_pred EEEeeCCC
Confidence 99997543
No 371
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=41.30 E-value=1.2e+02 Score=31.25 Aligned_cols=84 Identities=8% Similarity=0.041 Sum_probs=48.1
Q ss_pred eEEecCCCeEEEecCCeEEEEecCCCCceEE--EeccCCCCCCCCCCCCcccc---ccceeEEEEEEcCcEEEEEecCce
Q 011924 136 LVWATSKHDVYLMSHFSVIHWSSLTSSRSQV--LNVSGHVAPSEKHPGSLLEG---FTQTQVSTLAVKDKLLVAGGFQGE 210 (475)
Q Consensus 136 l~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~v~~l~~~~~~lvsg~~dg~ 210 (475)
++.+.+...+....|+.+.+........-.. ++..+-... ..+-+.+. ..+..|.++.++..+|++-+.|.+
T Consensus 166 L~avs~~~liVsL~DGGLLrL~r~~~~d~~~~~Fnd~s~l~S---L~~lf~~~~~~~~~~~Is~~~~~~~fLftL~~Dh~ 242 (729)
T 3f7f_A 166 LFYVSPQFSVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKC---LTRFFSRSSKSDYDSVISCKLFHERYLIVLTQNCH 242 (729)
T ss_dssp EEECSSSBEEEEETTSCEECCEESSSSCEECCCCCCCGGGGG---GSTTCCTTCSSCCCCEEEEEEETTTEEEEEETTCE
T ss_pred EEEECCCeEEEEEcCCCEEEEEeccCCCcceeeecCCchhhh---hHHhhcCCCCCCcCceEEEeccCCcEEEEEEcCCe
Confidence 3344555555557888888776543322111 111111110 01111110 122368888889999999999999
Q ss_pred EEEEeCCCCCce
Q 011924 211 LICKHLDRPGVS 222 (475)
Q Consensus 211 i~vw~~~~~~~~ 222 (475)
+++|++.+....
T Consensus 243 LRiWsL~t~~lv 254 (729)
T 3f7f_A 243 LKIWDLTSFTLI 254 (729)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEEcCCCceE
Confidence 999999986644
No 372
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=41.05 E-value=41 Score=34.68 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=29.2
Q ss_pred CceEEEEEccCCCEEEEEcCCCeEEEEECCCCeeEEEEe
Q 011924 391 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI 429 (475)
Q Consensus 391 ~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~~~~~~~~ 429 (475)
..|.++.+ +..+|++-+.|.++|+|+++++.++....
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 34555554 47799999999999999999998776654
No 373
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=39.71 E-value=2.2e+02 Score=25.81 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=64.1
Q ss_pred CCcEEEEEeCCCcEEEEECC-------CCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCC---Cc---e
Q 011924 316 DGKLLIIVGDNPDGLLVDSM-------TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL---SE---S 382 (475)
Q Consensus 316 ~g~~l~~~~~dg~i~iwd~~-------~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~---~~---~ 382 (475)
+...|+.++..|.++...+. .|.....+.. .+.+..+........++..+..|.+..+....- ++ -
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~G 191 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQG 191 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCC
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCC
Confidence 45677888899999888763 2322333443 456666655555567888889999888876431 11 1
Q ss_pred EEEEec-CCCceEEEEEccCCCEEEEEcCCCeEEEEECC
Q 011924 383 VAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 420 (475)
Q Consensus 383 ~~~~~~-~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~ 420 (475)
+..+.- ....|.++..-+++..|++.+..|......+.
T Consensus 192 v~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 192 VCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred eEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 111111 12345555554556678888888888888874
No 374
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=38.48 E-value=2.5e+02 Score=26.29 Aligned_cols=119 Identities=17% Similarity=0.138 Sum_probs=59.5
Q ss_pred EEecCCCeEEEecCCeEEEEecCCCCceEEEeccCCCCCCCCCCCCccccccceeEEEEEEcCcEEEEEecC-ceEEEEe
Q 011924 137 VWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQ-GELICKH 215 (475)
Q Consensus 137 ~~~~~~~~v~~~~~~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~lvsg~~d-g~i~vw~ 215 (475)
+.+...|.+.+..++.|+.|-.-..-..-. +. ......| ..+..+....|..++......++-..+ |.|+.|-
T Consensus 21 ia~G~~hs~al~~~g~v~~wG~n~~GqLG~----g~-~~~~~~P-~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG 94 (406)
T 4d9s_A 21 ISAGASHSVALLSGDIVCSWGRGEDGQLGH----GD-AEDRPSP-TQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWG 94 (406)
T ss_dssp EEECSSEEEEEETTTEEEEEECCTTSTTCS----SS-CCCEEEE-EECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEE
T ss_pred EecCCCeEEEEEeCCEEEEEeCCCCCCCCC----CC-cccCcCC-EEecccCCCCEEEEEeCcceEEEEECCCCEEEEEc
Confidence 456667778888899999996433211000 00 0000000 012233345788888855444444445 5999996
Q ss_pred CCCCC--------ceE-EEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCC
Q 011924 216 LDRPG--------VSF-CSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (475)
Q Consensus 216 ~~~~~--------~~~-~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~ 266 (475)
....+ ... ...+..-....|..|+. ... ..++-..+|.|..|-...
T Consensus 95 ~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~----G~~-h~~alt~~G~v~~wG~n~ 149 (406)
T 4d9s_A 95 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC----GDS-HCLAVTMEGEVQSWGRNQ 149 (406)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE----CSS-EEEEEETTSCEEEEECCT
T ss_pred CCCCcCCCCCCCCccccceEecccCCCCEEEEEE----Chh-heEEEcCCCcEEEeCCCC
Confidence 43221 111 11111112223555544 222 355556899999997643
No 375
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=38.42 E-value=2.1e+02 Score=25.34 Aligned_cols=155 Identities=8% Similarity=-0.073 Sum_probs=76.0
Q ss_pred cCcEEEEEecCceEEEEeCCCCC---ceEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEEEECCCCeeeeeee
Q 011924 198 KDKLLVAGGFQGELICKHLDRPG---VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR 274 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~~~~~---~~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 274 (475)
+..+++..+.+|.++...+..-. .......+.. ...+-.+.. ...... ++..+..|.+..+....-.....
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~--~~~~~~-ill~T~~G~~~r~~~~eip~~gR-- 152 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIAS--SVDETH-ILLFTKKGRVARFSVREVPPSTP-- 152 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEE--CCSSCE-EEEEETTSEEEEEEGGGSCBCCT--
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEE--eCCCCE-EEEEECCCEEEEEEhhhCCCcCC--
Confidence 35789999999999988765421 1110111222 233444433 334444 55666888887776532111000
Q ss_pred ccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECC-------CCceEEEeecCC
Q 011924 275 FPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSM-------TGKTIASLCGHL 347 (475)
Q Consensus 275 ~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~-------~~~~~~~l~~h~ 347 (475)
....+. ..++..+..+. .+...+++..++..+..|.++...+. .++-+..+ ...
T Consensus 153 ~a~Gv~------------~i~L~~~d~vv------~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~ 213 (276)
T 3no0_A 153 GARGVQ------------GIKLEKNDETS------GLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTK 213 (276)
T ss_dssp TCCCEE------------CCCCCTTCCEE------EEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSS
T ss_pred CCCCEE------------EEccCCCCEEE------EEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCC
Confidence 000111 01111111111 33333445678888899998888763 22223333 223
Q ss_pred CCeEEEEEecCCCEEEEEeCCCeEEE--EECC
Q 011924 348 DFSFASAWHPNGVTFATGNQDKTCRI--WDLR 377 (475)
Q Consensus 348 ~~v~~~~~sp~g~~l~t~s~dg~v~i--wd~~ 377 (475)
+.+..+........++..+..|.+.. ++..
T Consensus 214 ~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 214 DTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 44444433333345666666676666 6653
No 376
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=35.41 E-value=2.4e+02 Score=25.02 Aligned_cols=185 Identities=8% Similarity=-0.056 Sum_probs=98.7
Q ss_pred cCcEEEEEecCceEEEEeC---CCCCceEEEeeecCCCCceeEEEEEeCC-CCCeEEEEEeCCCeEEEEECCCCe-----
Q 011924 198 KDKLLVAGGFQGELICKHL---DRPGVSFCSRTTYDDNAITNAVEIYGSP-SGAVHFTASNNDCGVRDFDMGKYQ----- 268 (475)
Q Consensus 198 ~~~~lvsg~~dg~i~vw~~---~~~~~~~~~~~~~~~~~~v~~l~~~~s~-~g~~~l~s~s~dg~v~iwd~~~~~----- 268 (475)
....|+.-+..|.++--.+ ....... + ......|.++.. .. +.. .++..+..|.++-..+....
T Consensus 34 t~~~ll~fT~~G~v~~~~~~~lp~~~~~~---l-l~~~e~i~~v~~--~~~~~~-~~v~~T~~G~iKr~~l~~~~~~~~G 106 (276)
T 3no0_A 34 FTEGLFLVSNRGRVYWIAGSQALQGSKVS---L-KSREEKIVGAFI--REKFGN-RLLLATKKGYVKKIPLAEFEYKAQG 106 (276)
T ss_dssp TTSCEEEEETTSEEEEECSHHHHTSEECC---C-SSTTCCEEEEEE--GGGSCS-EEEEEETTSEEEEEEGGGTTTCSTT
T ss_pred CCCEEEEEcCCCeEEEEEhhhCccCcccc---c-CCCCCEEEEEEC--CcCCCC-EEEEEeCCCEEEEEEHHHhhhhcCC
Confidence 4556667778888775443 2111111 2 223344444422 21 334 47778899999999876543
Q ss_pred -eeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCC---------Cc
Q 011924 269 -LSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMT---------GK 338 (475)
Q Consensus 269 -~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~---------~~ 338 (475)
....+.....+. .+........++..+..|.++.+.... |.
T Consensus 107 ~~~i~lkegD~l~-----------------------------~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 107 MPIIKLTEGDEVV-----------------------------SIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp EECSCCCTTCCEE-----------------------------EEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred eEEEecCCCCEEE-----------------------------EEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 011111112222 333344555777788888888776431 11
Q ss_pred eEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCC------CceEEEEecCCCceEEEEEccCCCEEEEEcCCC
Q 011924 339 TIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL------SESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD 412 (475)
Q Consensus 339 ~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~------~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg 412 (475)
....|. ..+.|.++...+++..++..+..|.++...+... ++-+..+ ...+.+..+....+...++..+.+|
T Consensus 158 ~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G 235 (276)
T 3no0_A 158 QGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNG 235 (276)
T ss_dssp ECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTS
T ss_pred EEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCC
Confidence 222233 2356666655566678889999999988876421 1122223 2233444443333334555666667
Q ss_pred eEEE--EECC
Q 011924 413 FVHV--YDVK 420 (475)
Q Consensus 413 ~i~i--wd~~ 420 (475)
.+.. +++.
T Consensus 236 ~~ir~~~~~~ 245 (276)
T 3no0_A 236 KAFYDKINQK 245 (276)
T ss_dssp CEEEEEEEGG
T ss_pred eEEEeeeCHH
Confidence 6666 6654
No 377
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=35.39 E-value=3.9e+02 Score=27.50 Aligned_cols=181 Identities=9% Similarity=-0.033 Sum_probs=93.5
Q ss_pred CCCCCeEEEEEeCCC----eEEEEECCCCeeee-eeeccc-------cEEeccCCceEEEEEEeecccceEEEEeeeeee
Q 011924 243 SPSGAVHFTASNNDC----GVRDFDMGKYQLSK-HFRFPW-------PVNVSSSYCIILLCRLLNFMTEKVIICLLCLQH 310 (475)
Q Consensus 243 s~~g~~~l~s~s~dg----~v~iwd~~~~~~~~-~~~~~~-------~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~ 310 (475)
+|++++++++-|..| .++++|+.+++.+. .|. +. .+.|+ .
T Consensus 138 ~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~---------------------------~ 189 (711)
T 4hvt_A 138 FQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFT---------------------------Y 189 (711)
T ss_dssp SSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETC---------------------------C
T ss_pred CCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccc---------------------------e
Confidence 788887666655444 69999999988764 222 11 01221 3
Q ss_pred EEECCCCcEEEEE----------eCCCcEEEEECCCCc--eEEEeecCCCCe-EEEEEecCCC-----EEEEEeCC---C
Q 011924 311 SSQSPDGKLLIIV----------GDNPDGLLVDSMTGK--TIASLCGHLDFS-FASAWHPNGV-----TFATGNQD---K 369 (475)
Q Consensus 311 ~~~sp~g~~l~~~----------~~dg~i~iwd~~~~~--~~~~l~~h~~~v-~~~~~sp~g~-----~l~t~s~d---g 369 (475)
++|-.+...+++. +....++.|.+-+.. -...+.+....+ .....+++++ .+++.+.+ .
T Consensus 190 ~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 269 (711)
T 4hvt_A 190 PTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNY 269 (711)
T ss_dssp EEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCE
T ss_pred eeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCce
Confidence 3565333333321 123568888876542 234455433333 3344556666 24444422 3
Q ss_pred eEEEEECCCCCceEEEEecCCCceEEEEEccCCCEEEEE----------cCCCeEEEEECCCCe-------eEEEEecc-
Q 011924 370 TCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATA----------EPADFVHVYDVKSGY-------EKEQEIDF- 431 (475)
Q Consensus 370 ~v~iwd~~~~~~~~~~~~~~~~~v~~l~~spdg~~la~~----------~~dg~i~iwd~~~~~-------~~~~~~~~- 431 (475)
.+.+.|.......+..+...... .+..++++++++.. ...+.|.+.++.++. ....+..+
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (711)
T 4hvt_A 270 DNYILDTKYKNLKLQKINMPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT 347 (711)
T ss_dssp EEEEEECSSSSCEEEECCSCTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC
T ss_pred eEEEEcCCCCCCcceEeecCCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC
Confidence 46666765333333444333221 23445566655532 146779999987641 12222322
Q ss_pred -CCCeEEEEEcCCCCeEEEEEecC
Q 011924 432 -FGEISGISFSPDTESLFIGVWDR 454 (475)
Q Consensus 432 -~~~i~~l~fspdg~~l~~~~~D~ 454 (475)
...+.++.|..+ ..+++...++
T Consensus 348 ~~~~l~~~~~~~~-~l~~~~~~~~ 370 (711)
T 4hvt_A 348 ANEVFNFISTTKD-RVFLATYDNV 370 (711)
T ss_dssp TTEEEEEEEECSS-CEEEEEEETT
T ss_pred CCCeEEEEEEECC-EEEEEEEECC
Confidence 346778888876 3444444443
No 378
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=33.37 E-value=2.8e+02 Score=25.29 Aligned_cols=163 Identities=9% Similarity=0.032 Sum_probs=79.4
Q ss_pred eEEEEEE-----cCcEEEEEecCceEEEEeCCCCCc----eEEEeeecCCCCceeEEEEEeCCCCCeEEEEEeCCCeEEE
Q 011924 191 QVSTLAV-----KDKLLVAGGFQGELICKHLDRPGV----SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (475)
Q Consensus 191 ~v~~l~~-----~~~~lvsg~~dg~i~vw~~~~~~~----~~~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~dg~v~i 261 (475)
.|.++.. +..++++.+.+|.++--.+..-.. ......+.... .+-.+.. ...... ++..+..|.+..
T Consensus 96 ~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D-~lv~~~~--~~~~d~-ill~T~~G~~~r 171 (327)
T 3uc1_A 96 RIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDND-ELVGAVL--CSAGDD-LLLVSANGQSIR 171 (327)
T ss_dssp CEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTC-CEEEEEE--ECTTCE-EEEEETTSEEEE
T ss_pred EEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCC-EEEEEEE--ecCCCE-EEEEECCCeEEE
Confidence 4555543 367999999999999887643111 11111222333 3333333 223344 555568888877
Q ss_pred EECC--CCeeeeeeeccccEEeccCCceEEEEEEeecccceEEEEeeeeeeEEECCCCcEEEEEeCCCcEEEEECCC---
Q 011924 262 FDMG--KYQLSKHFRFPWPVNVSSSYCIILLCRLLNFMTEKVIICLLCLQHSSQSPDGKLLIIVGDNPDGLLVDSMT--- 336 (475)
Q Consensus 262 wd~~--~~~~~~~~~~~~~v~~s~~~~~l~~~~v~d~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~dg~i~iwd~~~--- 336 (475)
+... .-..... ....+. +.++..+..+. ++..-+.+..++.++..|.++...+..
T Consensus 172 f~~~~~eip~~gr--~a~Gv~------------~i~L~~~d~Vv------~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~ 231 (327)
T 3uc1_A 172 FSATDEALRPMGR--ATSGVQ------------GMRFNIDDRLL------SLNVVREGTYLLVATSGGYAKRTAIEEYPV 231 (327)
T ss_dssp EECCTTTSCCCCT--TSBCEE------------SSCCCTTCCEE------EEEECCTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred EECcccccCcCCc--CCCCee------------eecCCCCCEEE------EEEEECCCCEEEEEeCCCcEEEEEHHHccc
Confidence 7765 2111000 000111 11111111111 444444566788888999988876531
Q ss_pred ----CceEEEee--cCCCCeEEEEEecCCCEEEEEeCCCeEEEEECC
Q 011924 337 ----GKTIASLC--GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR 377 (475)
Q Consensus 337 ----~~~~~~l~--~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~ 377 (475)
++-+..+. .-.+.+..+....+...++..+..|.+.-+...
T Consensus 232 ~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 232 QGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 12222222 112344444333334455556666666666653
No 379
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=30.64 E-value=3.1e+02 Score=24.93 Aligned_cols=103 Identities=11% Similarity=-0.060 Sum_probs=60.7
Q ss_pred CcEEEEEeCCCcEEEEECC--------CCceEEEeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEECCCC---Cc---e
Q 011924 317 GKLLIIVGDNPDGLLVDSM--------TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL---SE---S 382 (475)
Q Consensus 317 g~~l~~~~~dg~i~iwd~~--------~~~~~~~l~~h~~~v~~~~~sp~g~~l~t~s~dg~v~iwd~~~~---~~---~ 382 (475)
+..++.++.+|.++-..+. .|.....+.. .+.+..+........++..+.+|.+..+..... ++ -
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~G 184 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAG 184 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCC
T ss_pred CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcC
Confidence 5678888999999988764 1222222332 255655555555567888888898888876421 11 1
Q ss_pred EEEEec-CCCceEEEEEccCCC-EEEEEcCCCeEEEEECC
Q 011924 383 VAVLKG-NLGAIRSIRYTSDGR-YMATAEPADFVHVYDVK 420 (475)
Q Consensus 383 ~~~~~~-~~~~v~~l~~spdg~-~la~~~~dg~i~iwd~~ 420 (475)
+..+.- ....|.++..-+++. .|++.+..|..+..++.
T Consensus 185 V~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 185 VKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 222211 123455554434444 67777888887777764
No 380
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=30.04 E-value=4.7e+02 Score=26.85 Aligned_cols=98 Identities=16% Similarity=0.102 Sum_probs=47.1
Q ss_pred eEEECC-CCcEEEEEeCCCcEEEEE-CCCCceEEEeec---C--------------CCCeEEEEEecCC-------CEEE
Q 011924 310 HSSQSP-DGKLLIIVGDNPDGLLVD-SMTGKTIASLCG---H--------------LDFSFASAWHPNG-------VTFA 363 (475)
Q Consensus 310 ~~~~sp-~g~~l~~~~~dg~i~iwd-~~~~~~~~~l~~---h--------------~~~v~~~~~sp~g-------~~l~ 363 (475)
.++++| +...+.++...|. -||- ...|+....+.. + ...+..+.++|.. ..++
T Consensus 136 ~l~~~p~~~~~v~~g~~~g~-gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~ 214 (737)
T 2cn3_A 136 RLAIDPNDNRILYLGTRCGN-GLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIY 214 (737)
T ss_dssp CEEECSSCTTCEEEECSTTC-CEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEE
T ss_pred eEEECCCCCCEEEEeeccCC-cEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEE
Confidence 778888 4456666653322 2333 334443333321 1 1236678888743 2566
Q ss_pred EEeCCCeEEEEECCCCCceEEEEecCC-Cc-eEEEEEccCCCEEEEE
Q 011924 364 TGNQDKTCRIWDLRNLSESVAVLKGNL-GA-IRSIRYTSDGRYMATA 408 (475)
Q Consensus 364 t~s~dg~v~iwd~~~~~~~~~~~~~~~-~~-v~~l~~spdg~~la~~ 408 (475)
.+..++.-.||-....+..-..+.+.. +. ...+.++|++.+.++.
T Consensus 215 ~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~ 261 (737)
T 2cn3_A 215 VGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITY 261 (737)
T ss_dssp EEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEE
T ss_pred EEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEe
Confidence 665554323454433343333332211 11 2456678877655543
No 381
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=23.86 E-value=6e+02 Score=26.04 Aligned_cols=137 Identities=14% Similarity=0.090 Sum_probs=74.3
Q ss_pred eEEECCCCc-----EEEEEeCC---CcEEEEECCC--CceEEEeecCCCCeEEEEEecCCCEEEEE----------eCCC
Q 011924 310 HSSQSPDGK-----LLIIVGDN---PDGLLVDSMT--GKTIASLCGHLDFSFASAWHPNGVTFATG----------NQDK 369 (475)
Q Consensus 310 ~~~~sp~g~-----~l~~~~~d---g~i~iwd~~~--~~~~~~l~~h~~~v~~~~~sp~g~~l~t~----------s~dg 369 (475)
+...+++++ .+++.+.+ ..+++.+... ++ +..+...... .+..++.+.+++.. ...+
T Consensus 244 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (711)
T 4hvt_A 244 SAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAG 320 (711)
T ss_dssp EEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTTC--EEEEEETTEEEEECSSCEEETTEEECTT
T ss_pred EEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCcc--eEeeeECCEEEEEECcccccccccCCCC
Confidence 445666665 24443322 3456666553 33 3334322221 23455666666633 2456
Q ss_pred eEEEEECCCC------CceEEE-Eec-CCCceEEEEEccCCCEEEEEcCCC--eEEEEECCCCe-eEEE-Ee-ccCCCeE
Q 011924 370 TCRIWDLRNL------SESVAV-LKG-NLGAIRSIRYTSDGRYMATAEPAD--FVHVYDVKSGY-EKEQ-EI-DFFGEIS 436 (475)
Q Consensus 370 ~v~iwd~~~~------~~~~~~-~~~-~~~~v~~l~~spdg~~la~~~~dg--~i~iwd~~~~~-~~~~-~~-~~~~~i~ 436 (475)
.|.+.|+.+. ...... +.. ....+..+.+..+ .++++...++ .|.++++.++. .... +. ...+.+.
T Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~ 399 (711)
T 4hvt_A 321 SLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIF 399 (711)
T ss_dssp CEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEE
T ss_pred eEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEE
Confidence 7888998652 112222 332 3346778888876 5666666665 47778876664 2333 22 1235677
Q ss_pred EEEEcCCCCeEEEE
Q 011924 437 GISFSPDTESLFIG 450 (475)
Q Consensus 437 ~l~fspdg~~l~~~ 450 (475)
...+++++..++..
T Consensus 400 ~~~~~~~~~~~~~~ 413 (711)
T 4hvt_A 400 GMSSYEEEEEALIT 413 (711)
T ss_dssp EEECCTTCSCEEEE
T ss_pred EEeecCcCCEEEEE
Confidence 77788887666654
No 382
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=23.84 E-value=4e+02 Score=23.96 Aligned_cols=137 Identities=6% Similarity=-0.003 Sum_probs=73.5
Q ss_pred CCcEEEEEeCCCcEEEEECC---CC------ce---EEEeecCCCCeEEEEEec---CCCEEEEEeCCCeEEEEECCCC-
Q 011924 316 DGKLLIIVGDNPDGLLVDSM---TG------KT---IASLCGHLDFSFASAWHP---NGVTFATGNQDKTCRIWDLRNL- 379 (475)
Q Consensus 316 ~g~~l~~~~~dg~i~iwd~~---~~------~~---~~~l~~h~~~v~~~~~sp---~g~~l~t~s~dg~v~iwd~~~~- 379 (475)
....++..+..|.++-.... .. .+ ...+. ....|.++..-+ +..+++..+..|.++...+...
T Consensus 57 ~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~ 135 (312)
T 1suu_A 57 THDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFK 135 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGC
T ss_pred CCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhh
Confidence 34456666778877665542 11 11 00122 123454443332 4567888899999998887432
Q ss_pred -----CceEEEEecCCCceEEEEEccCCCEEEEEcCCCeEEEEECCCC---------eeEEEEeccCCCeEEEEEcCCCC
Q 011924 380 -----SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG---------YEKEQEIDFFGEISGISFSPDTE 445 (475)
Q Consensus 380 -----~~~~~~~~~~~~~v~~l~~spdg~~la~~~~dg~i~iwd~~~~---------~~~~~~~~~~~~i~~l~fspdg~ 445 (475)
+.....+.. .+.+..+........++.++.+|.+..+....- .....+. ....|.++..-+++.
T Consensus 136 ~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~ 213 (312)
T 1suu_A 136 AVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENP 213 (312)
T ss_dssp C----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCS
T ss_pred ccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCC
Confidence 112222332 345555555555567888888998888886431 1111111 134556665544555
Q ss_pred eEEEEEecCC
Q 011924 446 SLFIGVWDRT 455 (475)
Q Consensus 446 ~l~~~~~D~~ 455 (475)
.|++.+..|.
T Consensus 214 ~l~~vt~~G~ 223 (312)
T 1suu_A 214 YLLIVSENGY 223 (312)
T ss_dssp EEEEEETTSE
T ss_pred eEEEEECCCc
Confidence 5666655543
No 383
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=23.33 E-value=5e+02 Score=24.85 Aligned_cols=73 Identities=16% Similarity=0.051 Sum_probs=40.9
Q ss_pred ceeEEEEEEcCcEEEEEecCceEEEEeCCC--CC----------ceE-EEeeecCCCCceeEEEEEeCCCCCeEEEEEeC
Q 011924 189 QTQVSTLAVKDKLLVAGGFQGELICKHLDR--PG----------VSF-CSRTTYDDNAITNAVEIYGSPSGAVHFTASNN 255 (475)
Q Consensus 189 ~~~v~~l~~~~~~lvsg~~dg~i~vw~~~~--~~----------~~~-~~~~~~~~~~~v~~l~~~~s~~g~~~l~s~s~ 255 (475)
...|..++......++-..+|.|+.|-... .+ ... ...+..-....|..|+. ... ..++-..
T Consensus 147 ~~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~----G~~-hs~alt~ 221 (473)
T 3of7_A 147 GHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAP----GKD-HILFLDE 221 (473)
T ss_dssp TCCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEE----CSS-EEEEEET
T ss_pred CCcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEe----cCC-eEEEEeC
Confidence 357888888666666667899999997521 00 111 11111111123555544 222 3555568
Q ss_pred CCeEEEEECCC
Q 011924 256 DCGVRDFDMGK 266 (475)
Q Consensus 256 dg~v~iwd~~~ 266 (475)
+|.|..|-...
T Consensus 222 ~G~v~~wG~n~ 232 (473)
T 3of7_A 222 EGMVFAWGNGQ 232 (473)
T ss_dssp TSCEEEEECCT
T ss_pred CCeEEEEeCCC
Confidence 99999997644
Done!