Your job contains 1 sequence.
>011925
MTSSTVMNYDIENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRG
AAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS
TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY
AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHAR
ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF
IVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMM
VTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSL
TVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLLQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011925
(475 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2101442 - symbol:AT3G60070 "AT3G60070" species... 1633 6.6e-168 1
TAIR|locus:2050626 - symbol:AT2G44280 "AT2G44280" species... 1631 1.1e-167 1
UNIPROTKB|Q6NUT3 - symbol:MFSD12 "Major facilitator super... 274 1.6e-45 2
MGI|MGI:3604804 - symbol:Mfsd12 "major facilitator superf... 275 4.3e-44 2
ZFIN|ZDB-GENE-030131-4642 - symbol:mfsd12a "major facilit... 274 3.6e-42 2
WB|WBGene00017530 - symbol:F16H11.1 species:6239 "Caenorh... 399 3.9e-37 1
TIGR_CMR|CPS_3708 - symbol:CPS_3708 "sugar:cation symport... 127 5.9e-05 1
>TAIR|locus:2101442 [details] [associations]
symbol:AT3G60070 "AT3G60070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0016020 "membrane" evidence=ISS]
EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR016196
SUPFAM:SSF103473 eggNOG:NOG263455 OMA:CARYGPR HOGENOM:HOG000239767
ProtClustDB:CLSN2693570 EMBL:AY123977 IPI:IPI00527851
RefSeq:NP_191566.5 UniGene:At.1176 ProteinModelPortal:Q8L7Z7
EnsemblPlants:AT3G60070.1 GeneID:825177 KEGG:ath:AT3G60070
TAIR:At3g60070 InParanoid:Q8L7Z7 PhylomeDB:Q8L7Z7
Genevestigator:Q8L7Z7 Uniprot:Q8L7Z7
Length = 458
Score = 1633 (579.9 bits), Expect = 6.6e-168, P = 6.6e-168
Identities = 312/465 (67%), Positives = 372/465 (80%)
Query: 14 DDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADG 73
+D FT+P+GRWSV +YG GHMLNDITA+CWFTYLLLFLT IGLSPR AA VMLSGQ+AD
Sbjct: 7 EDPFTKPIGRWSVFFYGVGHMLNDITASCWFTYLLLFLTQIGLSPRDAAIVMLSGQVADA 66
Query: 74 FATIFIGELIDRFGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYCVFA 133
FATIF GELIDRFGHFKIWH C+PC IL +L +ET SY +FA
Sbjct: 67 FATIFTGELIDRFGHFKIWHAAGSLLVAISFSSVFGGCLPCSILHNDSLTLETFSYSMFA 126
Query: 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK 193
AIFN+GWAATQV+HM+MVNCI+LNSTSRV LTS RNAFTMVANL LYAIA +VF V A
Sbjct: 127 AIFNIGWAATQVSHMAMVNCISLNSTSRVALTSSRNAFTMVANLGLYAIALVVFGVIKAG 186
Query: 194 THADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYY 253
+ D E QYRWIAYSSI IGCCFV IFL T+EPRL++ L+ S ARI W YWF+KILYY
Sbjct: 187 SKEDTETQYRWIAYSSITIGCCFVVIFLMGTKEPRLRIDLKETSRARIPWVYWFRKILYY 246
Query: 254 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG 313
QVA+VY+LTRLV+NVSQAYLAF+VI+DL+M QSAKALVPAIIYICSF+VS+LLQE+ W G
Sbjct: 247 QVAMVYLLTRLVLNVSQAYLAFFVIDDLQMDQSAKALVPAIIYICSFVVSVLLQEIPWNG 306
Query: 314 QRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE 373
+RLKAYY+AGG++W+FCGA IL+LP ++S+FMY +++F+GIANALMMVT ISMQ+VLVG
Sbjct: 307 KRLKAYYTAGGIIWIFCGAAILLLPRDISSFMYAISVFIGIANALMMVTAISMQSVLVGA 366
Query: 374 DLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSY 433
++ GCAFVCG+LSFLDKMSCG+A+YVLQS+Q+ SP L+NN + Y
Sbjct: 367 EVGGCAFVCGSLSFLDKMSCGLALYVLQSHQTTSPR-----------GQLNNNQ--QSVY 413
Query: 434 ISVTRFGLGLIPAICSLVSVAVTFTMKLHTP--YSKPLV-EPLLQ 475
+SVTR+GLGL+PA+CS V VAVTF M+L SKPL+ EPLL+
Sbjct: 414 LSVTRYGLGLVPALCSFVGVAVTFFMELEAAGSLSKPLLREPLLE 458
>TAIR|locus:2050626 [details] [associations]
symbol:AT2G44280 "AT2G44280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 InterPro:IPR016196 SUPFAM:SSF103473
EMBL:AY128290 EMBL:BT002653 IPI:IPI00545135 RefSeq:NP_001078055.1
RefSeq:NP_181957.2 UniGene:At.36778 ProteinModelPortal:Q8L7S2
IntAct:Q8L7S2 EnsemblPlants:AT2G44280.1 EnsemblPlants:AT2G44280.2
GeneID:819036 KEGG:ath:AT2G44280 TAIR:At2g44280
HOGENOM:HOG000239767 InParanoid:Q8L7S2 OMA:MELDSTI PhylomeDB:Q8L7S2
ProtClustDB:CLSN2693570 Genevestigator:Q8L7S2 Uniprot:Q8L7S2
Length = 462
Score = 1631 (579.2 bits), Expect = 1.1e-167, P = 1.1e-167
Identities = 306/474 (64%), Positives = 376/474 (79%)
Query: 1 MTSSTVMNYDIENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRG 60
MTSS ++ + E +D T+P+GR SV YYG GHMLNDITA+CWFTYLLLFLT IGLSPR
Sbjct: 1 MTSSVIVGMEEEEEDPSTKPLGRLSVFYYGVGHMLNDITASCWFTYLLLFLTQIGLSPRD 60
Query: 61 AAAVMLSGQIADGFATIFIGELIDRFGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTS 120
AA VMLSGQ+ADGFATIFIGELIDRFGHFKIWH C+PC +L +
Sbjct: 61 AAIVMLSGQVADGFATIFIGELIDRFGHFKIWHAAGSLLVAISFSSVFGGCLPCSLLHNN 120
Query: 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180
+ +ET+SY +FAAIFN+GWAATQV+HM+MVNCITLNSTSRV LTS RNAF+MVANL LY
Sbjct: 121 SSTIETLSYSMFAAIFNIGWAATQVSHMAMVNCITLNSTSRVALTSSRNAFSMVANLGLY 180
Query: 181 AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHAR 240
AIA +VF VS A T + E+QYRWIAYSSI +GCCFV IFL T+EPRL++ LR S AR
Sbjct: 181 AIALVVFGVSEAVTKENTESQYRWIAYSSITVGCCFVVIFLMGTKEPRLRINLRETSRAR 240
Query: 241 ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF 300
I W+YWF+KILYYQVA+VY+LTRLV+NVSQAYLAF+VI+DL+M QSAKAL+PAIIY+CSF
Sbjct: 241 IPWSYWFRKILYYQVAMVYLLTRLVLNVSQAYLAFFVIDDLQMAQSAKALIPAIIYVCSF 300
Query: 301 IVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMM 360
+VS++LQE+ W G+RLKAYY AGG++W+FCG IL+LP +++++MY +++F+GIANA+M+
Sbjct: 301 VVSVMLQEIPWNGKRLKAYYCAGGIIWIFCGISILLLPRSINSYMYAISVFIGIANAVML 360
Query: 361 VTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSL 420
VT ISMQ+VL+G L GCAFVCG+LSFLDKMSCG+A+YVLQS+Q SP V D N
Sbjct: 361 VTSISMQSVLIGSKLGGCAFVCGSLSFLDKMSCGLALYVLQSHQGTSPKV-DVN------ 413
Query: 421 TVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLL 474
+ Y SVTR+GLGL+PA+CSLV V VT+ M+L + KPL +PLL
Sbjct: 414 -------IKEYFYFSVTRYGLGLVPAVCSLVGVVVTYFMELDSTILKPLCQPLL 460
>UNIPROTKB|Q6NUT3 [details] [associations]
symbol:MFSD12 "Major facilitator superfamily
domain-containing protein 12" species:9606 "Homo sapiens"
[GO:0006810 "transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] GO:GO:0016021 GO:GO:0006810
InterPro:IPR016196 SUPFAM:SSF103473 EMBL:CH471139 PROSITE:PS50850
EMBL:BC036706 EMBL:BC068439 IPI:IPI00166640 IPI:IPI00783894
RefSeq:NP_001036145.1 RefSeq:NP_068377.2 RefSeq:NP_778148.2
UniGene:Hs.656901 ProteinModelPortal:Q6NUT3 DMDM:125991816
PaxDb:Q6NUT3 PRIDE:Q6NUT3 Ensembl:ENST00000355415 GeneID:126321
KEGG:hsa:126321 UCSC:uc002lxx.3 UCSC:uc002lxy.3 CTD:126321
GeneCards:GC19M003539 HGNC:HGNC:28299 neXtProt:NX_Q6NUT3
PharmGKB:PA134955537 eggNOG:NOG263455 HOGENOM:HOG000006540
HOVERGEN:HBG056517 PhylomeDB:Q6NUT3 ChiTaRS:MFSD12
GenomeRNAi:126321 NextBio:81773 ArrayExpress:Q6NUT3 Bgee:Q6NUT3
CleanEx:HS_C19orf28 Genevestigator:Q6NUT3 Uniprot:Q6NUT3
Length = 480
Score = 274 (101.5 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 61/176 (34%), Positives = 93/176 (52%)
Query: 19 QPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATI 77
+P+ + L Y GH LND+ A+ WFTYLLL+L + S RGA ++L GQ+ADG T
Sbjct: 15 RPLSLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTP 74
Query: 78 FIGELIDR-------FGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYC 130
+G DR +G K WH C+ C + + + Y
Sbjct: 75 LVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAAL--LYYG 132
Query: 131 VFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186
F IF GWA+TQ++H+S++ + N +V LT+ R AFT+VAN+++Y A+++
Sbjct: 133 PFIVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLL 188
Score = 267 (99.0 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 59/180 (32%), Positives = 102/180 (56%)
Query: 225 EEPRLKMGLRGNSHAR--ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLR 282
EEP L + A+ + W +W ++ +YQV ++YM TRL+VN+SQ Y+A Y+ L
Sbjct: 248 EEPGEHTPLLAPATAQPLLLWKHWLREPAFYQVGILYMTTRLIVNLSQTYMAMYLTYSLH 307
Query: 283 MGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMS 342
+ + A +P ++Y+ F+ S L++ + R Y+S G+L + A + L +
Sbjct: 308 LPKKFIATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFS--GLLVILAFAAWVALAEGLG 365
Query: 343 AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 402
+Y A+ +G A ++VT ++M L+G + AFV G++SFLDK++ G+AV +QS
Sbjct: 366 VAVYAAAVLLGAGCATILVTSLAMTADLIGPHTNSGAFVYGSMSFLDKVANGLAVMAIQS 425
>MGI|MGI:3604804 [details] [associations]
symbol:Mfsd12 "major facilitator superfamily domain
containing 12" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] MGI:MGI:3604804 GO:GO:0016021
GO:GO:0006810 InterPro:IPR016196 SUPFAM:SSF103473 PROSITE:PS50850
CTD:126321 eggNOG:NOG263455 HOGENOM:HOG000006540 HOVERGEN:HBG056517
EMBL:AK149678 EMBL:AK154386 EMBL:AK154902 EMBL:AK171084
EMBL:BC118620 EMBL:BC119790 IPI:IPI00654076 RefSeq:NP_082933.2
UniGene:Mm.182281 ProteinModelPortal:Q3U481 PRIDE:Q3U481
DNASU:73822 Ensembl:ENSMUST00000044844 GeneID:73822 KEGG:mmu:73822
UCSC:uc007gho.1 GeneTree:ENSGT00390000016464 InParanoid:Q3U481
OMA:CARYGPR OrthoDB:EOG4W3SN4 NextBio:339129 Bgee:Q3U481
CleanEx:MM_F630110N24RIK Genevestigator:Q3U481 Uniprot:Q3U481
Length = 476
Score = 275 (101.9 bits), Expect = 4.3e-44, Sum P(2) = 4.3e-44
Identities = 62/177 (35%), Positives = 91/177 (51%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR 85
L + GH LND+ A WFTYLLLFL + G S RGA ++L GQ+ADG T +G DR
Sbjct: 22 LSFAVGHFLNDLCAGMWFTYLLLFLHSVRGYSSRGAGLLLLLGQVADGLCTPLVGYEADR 81
Query: 86 F-----GHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYCVFAAIFNVGW 140
G K WH C+ C + + + Y F +F GW
Sbjct: 82 ASCVRCGPRKAWHLAGTVCVLLSFPFIFSPCLGCGEATPEWAAL--LYYGPFIVVFQFGW 139
Query: 141 AATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197
AATQ+AH+S++ + + +V LT+ R AFT+VAN+++Y A+++ + H +
Sbjct: 140 AATQIAHLSLIPELVTSDHEKVELTALRYAFTVVANITVYGAAWLLLHLQ-GSAHGE 195
Score = 252 (93.8 bits), Expect = 4.3e-44, Sum P(2) = 4.3e-44
Identities = 53/160 (33%), Positives = 91/160 (56%)
Query: 243 WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIV 302
W +W ++ +YQV ++YM TRL+VN+SQ Y+A Y+ L + + A +P ++Y+ F
Sbjct: 264 WKHWLREPAFYQVGMLYMTTRLIVNLSQTYIAMYLTYSLSLPKKFIATIPLVMYLSGFFS 323
Query: 303 SILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVT 362
S L++ + R Y++ G+L + A + L N+ +Y A+ +G A ++VT
Sbjct: 324 SFLMKPVNRRIGRNMTYFT--GLLVILAFAAWVALADNLGVAVYGAAVLLGAGCATILVT 381
Query: 363 GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 402
++M L+G AFV G +SF DK++ G+AV +QS
Sbjct: 382 SLAMTADLIGPHTHSGAFVYGAMSFSDKVANGLAVMAVQS 421
Score = 39 (18.8 bits), Expect = 9.0e-22, Sum P(2) = 9.0e-22
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 462 HTPYSKPLVEPLL 474
HTP P +PLL
Sbjct: 250 HTPLVAPAAQPLL 262
>ZFIN|ZDB-GENE-030131-4642 [details] [associations]
symbol:mfsd12a "major facilitator superfamily
domain containing 12a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] ZFIN:ZDB-GENE-030131-4642
InterPro:IPR016196 SUPFAM:SSF103473 eggNOG:COG2211
HOGENOM:HOG000006540 HOVERGEN:HBG056517 OrthoDB:EOG4W3SN4
EMBL:BC128826 IPI:IPI00481376 UniGene:Dr.80044 InParanoid:A1A5V3
ArrayExpress:A1A5V3 Uniprot:A1A5V3
Length = 507
Score = 274 (101.5 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 71/214 (33%), Positives = 105/214 (49%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR 85
L Y GH LND+ A+ WFTYLL+F + G A ++L GQIADG T IG DR
Sbjct: 15 LSYSVGHFLNDLCASMWFTYLLVFYHSVLGFENTYAGVLLLVGQIADGVCTPLIGYESDR 74
Query: 86 ------FGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYCVFAAIFNVG 139
+G K WH C+ C L+T V + F IF G
Sbjct: 75 TPGCGSYGKRKTWHLVGTISVLLSFPFIFNQCLGCD-LNTPQW-VSVTYFAPFIIIFQFG 132
Query: 140 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199
WAATQ++H+S++ + +V LT+ R AFT++AN+++YA+A+++F A ++
Sbjct: 133 WAATQISHLSLIPELVSCEHEKVELTAYRYAFTVIANITVYAVAWLLFHFQEGDDPAVMD 192
Query: 200 NQ-------YRWIAYSSIFIGCCFVGIFLSRTEE 226
N +R ++ + IG F +F T E
Sbjct: 193 NLGSVDIPVFRNLSLIVVGIGAVFTFLFHLGTRE 226
Score = 237 (88.5 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 47/162 (29%), Positives = 95/162 (58%)
Query: 241 ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF 300
+ W W + +YQVAL+YM TRL+VN+SQ Y++ Y+ L + ++ A +P ++++ F
Sbjct: 258 LHWNNWLTQPSFYQVALLYMSTRLIVNLSQTYISMYLTYTLLLPKNYIATIPLVMFLSGF 317
Query: 301 IVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMM 360
S +++ ++ + Y+ G+L + + ++L +M +Y A+ +G+ +A ++
Sbjct: 318 ASSFIMKPVSKLIGKCMTYFL--GLLLILAFSYWVLLDTHMGDKVYGAAVLLGVGSATIL 375
Query: 361 VTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 402
V ++M L+G+ AFV G +SF DK++ G+ V ++Q+
Sbjct: 376 VMSLAMTAELIGDQTHSGAFVYGAMSFTDKVANGLGVMIIQT 417
>WB|WBGene00017530 [details] [associations]
symbol:F16H11.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] InterPro:IPR016196
SUPFAM:SSF103473 EMBL:FO080880 eggNOG:COG2211 HOGENOM:HOG000006540
GeneTree:ENSGT00390000016464 PIR:T16084 RefSeq:NP_508799.1
ProteinModelPortal:Q19498 EnsemblMetazoa:F16H11.1 GeneID:180739
KEGG:cel:CELE_F16H11.1 UCSC:F16H11.1 CTD:180739 WormBase:F16H11.1
InParanoid:Q19498 OMA:HFYNDLC NextBio:910714 Uniprot:Q19498
Length = 501
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 104/344 (30%), Positives = 176/344 (51%)
Query: 84 DRFGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYCVFAAIFNVGWAAT 143
D+ G WH C C+ ++ LKV + + F +F GWA+
Sbjct: 105 DKIGRRMSWHLIGTVLVSLSFPMIFNKCFLCKSTTSEWLKV--LWFVPFIMVFQFGWASV 162
Query: 144 QVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY-AIAFIVFSVSTAKTHA---DLE 199
Q++H++++ ++ SR + S R AFT++ANLS+Y A+A+++ S ST T D
Sbjct: 163 QISHLALIPELSSVPASRATMNSLRYAFTVIANLSVYFALAWLL-SESTGHTSIGPWDFS 221
Query: 200 NQYRWIAYSSIFIGCCFVGIFLSRTEEP-RLKMGLRGNSHA-------RISWAYWFKKIL 251
+ +R + + +G +F + T EP + R NS + R+ W WF +
Sbjct: 222 H-FRLAGWLVVVLGITVAFVFYAFTREPTNYRRFSRLNSFSSDASELVRMHWTSWFGHVQ 280
Query: 252 YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAW 311
+YQ+AL+YML+RL +N+SQ Y FY+ + A++P + Y+ SF VS++
Sbjct: 281 FYQIALLYMLSRLYINISQVYFPFYITMTQNYEKKYVAILPMVAYLSSFSVSMVNSLPVV 340
Query: 312 TGQRLKAYYSAG---GVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQN 368
+ K YS G G+L C +L LP +Y LA+ +GIA A++++T +S+
Sbjct: 341 SKLSKKILYSFGLASGML--SCAVMMLDLP---GWKIYALAVGIGIAQAILLITSLSITA 395
Query: 369 VLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ----SYQSMSP 408
L+ ++ AFV G +SF DK+S GIA +++ +Y ++ P
Sbjct: 396 DLINKNTESGAFVYGAMSFFDKLSNGIAYQLIELWTPAYDALKP 439
Score = 326 (119.8 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 105/417 (25%), Positives = 201/417 (48%)
Query: 12 ENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQI 70
++D SFT+ + +G GH ND+ A+ WFTY ++++ + A +ML GQ+
Sbjct: 29 DHDISFTKKIA------FGIGHFYNDLCASMWFTYFMIYMEKVLKFQSSRAGMLMLIGQV 82
Query: 71 ADGFATIFIG---------ELIDRFGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTST 121
D +T +G D+ G WH C C+ ++
Sbjct: 83 TDAISTPLVGIFSDSNILPACFDKIGRRMSWHLIGTVLVSLSFPMIFNKCFLCKSTTSEW 142
Query: 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY- 180
LKV + + F +F GWA+ Q++H++++ ++ SR + S R AFT++ANLS+Y
Sbjct: 143 LKV--LWFVPFIMVFQFGWASVQISHLALIPELSSVPASRATMNSLRYAFTVIANLSVYF 200
Query: 181 AIAFIVFSVSTAKTHA---DLENQYRWIAYSSIFIGCCFVGIFLSRTEEP-RLKMGLRGN 236
A+A+++ S ST T D + +R + + +G +F + T EP + R N
Sbjct: 201 ALAWLL-SESTGHTSIGPWDFSH-FRLAGWLVVVLGITVAFVFYAFTREPTNYRRFSRLN 258
Query: 237 SHA----RISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAF---YVINDLRMGQSAKA 289
S + + +W + Q Y + L + +S+ Y+ Y + M Q+ +
Sbjct: 259 SFSSDASELVRMHWTSWFGHVQF---YQIALLYM-LSRLYINISQVYFPFYITMTQNYEK 314
Query: 290 LVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVF-CGAGIL---ILPMNMSAF- 344
AI+ + +++ S + + + + S +L+ F +G+L ++ +++ +
Sbjct: 315 KYVAILPMVAYLSSFSVSMV--NSLPVVSKLSKK-ILYSFGLASGMLSCAVMMLDLPGWK 371
Query: 345 MYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 401
+Y LA+ +GIA A++++T +S+ L+ ++ AFV G +SF DK+S GIA +++
Sbjct: 372 IYALAVGIGIAQAILLITSLSITADLINKNTESGAFVYGAMSFFDKLSNGIAYQLIE 428
>TIGR_CMR|CPS_3708 [details] [associations]
symbol:CPS_3708 "sugar:cation symporter family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0005402
"cation:sugar symporter activity" evidence=ISS] [GO:0008643
"carbohydrate transport" evidence=ISS] InterPro:IPR001927
GO:GO:0016020 GO:GO:0005215 InterPro:IPR016196 SUPFAM:SSF103473
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006814
eggNOG:COG2211 TIGRFAMs:TIGR00792 HOGENOM:HOG000222022
ProtClustDB:CLSK938263 RefSeq:YP_270375.1 ProteinModelPortal:Q47XU5
STRING:Q47XU5 GeneID:3521262 KEGG:cps:CPS_3708 PATRIC:21470343
OMA:YQELADY BioCyc:CPSY167879:GI48-3730-MONOMER Uniprot:Q47XU5
Length = 442
Score = 127 (49.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 89/387 (22%), Positives = 162/387 (41%)
Query: 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-- 85
YG G ++I +LLLF TD+ GLSP + L ++ D +G L D+
Sbjct: 10 YGLGDTASNIIFQTVMMFLLLFYTDVVGLSPAVVGTMFLFVRLIDAVTDPIMGNLADKTR 69
Query: 86 --FGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYCVFAAIFNVGWAAT 143
+G F+ + P T KV ++ + + + + A
Sbjct: 70 TKWGQFRPYLLWLALPFALISILAFTT--PDL---TGNNKV-IYAFVTYTLLM-IAYTAI 122
Query: 144 QVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYR 203
+ + + IT ++ RV + S R F M+ + + A A + + QY
Sbjct: 123 NIPYCGLGGVITADAKERVTVQSYRFVFGMLGGV-IVAGATMPMVEWFGQGDTAKGYQYT 181
Query: 204 WIAYSSIFIGC---CFVGIFLSRTEEPRLK-MGLRGNSHARISWAYWFKKILYYQVALVY 259
+A SS+ + CF+G R + P + ++ N + W +IL +A Y
Sbjct: 182 MVAMSSLGVVLFLLCFLGT-KERVKPPENQDSSMKENLQSLWKNDQW--RILC--IASFY 236
Query: 260 MLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAII---YICSFIVSILLQEMAWTGQRL 316
+LT V+ ++ LA Y + +G+ + L+ + + + S I + Q +A ++
Sbjct: 237 LLTGQVLRLT---LAVYYVKYF-LGR--EDLITSFLTLGVVASMIGCAVAQPLAKRVCKI 290
Query: 317 KAYYSAGGVLWVFCGAGILILPMNMS-AFMYVLA--IFVGIANALM---MVTGISMQNVL 370
KAY + + V C A LI P + AF+ ++ F+ +A+ L+ M I +
Sbjct: 291 KAYIALQSLSAVICLASFLISPNQIILAFVAFISWKFFLDMASPLLWAKMADTIDYGHKK 350
Query: 371 VGEDLSGCAFVCGTLSFLDKMSCGIAV 397
G ++G + G + F+ KM GIA+
Sbjct: 351 TGIRVTGLVY-SGVIFFI-KM--GIAI 373
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.137 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 475 458 0.00095 118 3 11 22 0.42 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 620 (66 KB)
Total size of DFA: 267 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.23u 0.10s 34.33t Elapsed: 00:00:02
Total cpu time: 34.23u 0.10s 34.33t Elapsed: 00:00:02
Start: Mon May 20 22:27:45 2013 End: Mon May 20 22:27:47 2013