Query 011926
Match_columns 475
No_of_seqs 123 out of 1452
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 18:08:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 3E-102 1E-106 825.5 45.0 457 4-465 70-527 (546)
2 1kp8_A Groel protein; chaperon 100.0 9E-102 3E-106 823.6 47.5 460 3-464 69-528 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 2E-101 7E-106 821.6 49.5 460 3-464 69-530 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 3E-101 9E-106 820.4 40.8 460 3-464 70-530 (545)
5 3p9d_C T-complex protein 1 sub 100.0 2.1E-87 7.2E-92 718.2 32.4 429 4-462 75-589 (590)
6 3ruv_A Chaperonin, CPN; double 100.0 2.5E-85 8.6E-90 699.9 38.1 405 4-468 75-528 (543)
7 3ko1_A Chaperonin; 9-fold symm 100.0 3.8E-85 1.3E-89 698.7 37.1 401 4-464 86-538 (553)
8 3iyg_H T-complex protein 1 sub 100.0 8.8E-84 3E-88 684.0 43.1 399 4-459 67-514 (515)
9 3aq1_B Thermosome subunit; gro 100.0 1.7E-84 5.8E-89 687.7 37.4 402 4-465 29-482 (500)
10 3iyg_B T-complex protein 1 sub 100.0 1.3E-83 4.5E-88 682.9 44.0 397 4-461 68-513 (513)
11 1a6d_B Thermosome (beta subuni 100.0 1.9E-84 6.6E-89 693.7 37.8 401 4-464 77-528 (543)
12 3iyg_A T-complex protein 1 sub 100.0 9.1E-84 3.1E-88 686.5 41.7 402 4-460 66-529 (529)
13 1q3q_A Thermosome alpha subuni 100.0 3.5E-84 1.2E-88 691.8 38.0 401 4-464 79-530 (548)
14 1a6d_A Thermosome (alpha subun 100.0 3.9E-84 1.3E-88 691.0 36.8 398 4-462 78-525 (545)
15 3p9d_A T-complex protein 1 sub 100.0 4E-84 1.4E-88 692.3 36.3 406 4-464 80-553 (559)
16 3p9d_G T-complex protein 1 sub 100.0 1.2E-84 4E-89 695.2 28.1 403 4-464 80-532 (550)
17 3iyg_D T-complex protein 1 sub 100.0 3.7E-82 1.3E-86 672.5 42.1 396 4-459 67-518 (518)
18 3p9d_D T-complex protein 1 sub 100.0 1.7E-83 5.7E-88 683.8 31.3 400 4-459 75-528 (528)
19 3iyg_G T-complex protein 1 sub 100.0 3.8E-82 1.3E-86 672.0 41.1 396 4-459 65-514 (515)
20 3iyg_E T-complex protein 1 sub 100.0 5.4E-82 1.8E-86 671.3 42.3 395 4-458 66-514 (515)
21 3p9d_B T-complex protein 1 sub 100.0 6.9E-83 2.4E-87 679.9 27.8 401 4-465 74-524 (527)
22 3iyg_Q T-complex protein 1 sub 100.0 9.8E-81 3.3E-85 661.2 43.2 395 4-459 67-512 (512)
23 3p9d_E T-complex protein 1 sub 100.0 6.7E-82 2.3E-86 675.5 33.6 404 4-461 101-560 (562)
24 3iyg_Z T-complex protein 1 sub 100.0 7.7E-81 2.6E-85 661.7 40.1 394 4-458 66-516 (517)
25 3p9d_H T-complex protein 1 sub 100.0 2.6E-82 8.9E-87 679.4 22.1 404 4-467 82-556 (568)
26 3p9d_F T-complex protein 1 sub 100.0 1.7E-80 6E-85 663.5 29.4 400 4-463 73-541 (546)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 4.5E-43 1.6E-47 316.1 18.1 193 120-312 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 8.5E-42 2.9E-46 308.3 19.0 189 122-310 11-199 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 3.4E-32 1.2E-36 234.4 15.8 144 125-268 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 1.9E-25 6.4E-30 204.8 12.5 146 116-320 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.9 2.3E-21 7.7E-26 174.3 13.6 127 123-272 1-154 (159)
32 1gtz_A 3-dehydroquinate dehydr 33.6 1.6E+02 0.0056 25.2 7.9 85 147-234 3-103 (156)
33 2q8p_A Iron-regulated surface 30.2 77 0.0026 28.8 6.0 57 170-231 53-109 (260)
34 1pq4_A Periplasmic binding pro 27.3 1.8E+02 0.0062 27.3 8.2 38 161-198 221-258 (291)
35 1s3l_A Hypothetical protein MJ 26.6 1.5E+02 0.005 25.8 7.0 54 143-196 17-72 (190)
36 1n2z_A Vitamin B12 transport p 22.9 1.1E+02 0.0039 27.4 5.7 56 170-230 50-106 (245)
37 3md9_A Hemin-binding periplasm 22.3 2.2E+02 0.0077 25.5 7.7 58 170-232 52-111 (255)
38 2lnd_A De novo designed protei 21.4 1.8E+02 0.0061 22.0 5.3 36 161-196 35-70 (112)
39 2r7a_A Bacterial heme binding 21.3 2.4E+02 0.0081 25.3 7.6 57 170-231 52-111 (256)
40 2cos_A Serine/threonine protei 21.0 1.2E+02 0.0042 21.1 3.9 34 37-70 14-51 (54)
41 2ooa_A E3 ubiquitin-protein li 20.0 1.7E+02 0.0058 20.2 4.5 36 34-69 13-51 (52)
42 4hn9_A Iron complex transport 20.0 1.9E+02 0.0065 27.4 6.9 57 170-232 109-165 (335)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=2.8e-102 Score=825.53 Aligned_cols=457 Identities=53% Similarity=0.799 Sum_probs=424.2
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATI 83 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~~~~~l~~va~t 83 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|+++.+.|.++|++
T Consensus 70 Akll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~i 149 (546)
T 3rtk_A 70 AELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAI 149 (546)
T ss_dssp HHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCChhHHhHHHHHHHHhCCCCccccccCCCcc-chheeecceEEeecccCCccccCcccccceecceeEEEeccccCC
Q 011926 84 SAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE-TTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISA 162 (475)
Q Consensus 84 s~~~~~~l~~li~~a~~~~~~~g~I~v~~g~~~~-ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~~~~~i~~ 162 (475)
|++ ++++++++++|+.+++++|.|+++.+++.. |+ ++++|++|+++|+||||++++++|+++++||+|+++|++|++
T Consensus 150 S~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds-~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~ 227 (546)
T 3rtk_A 150 SAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQL-ELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVST 227 (546)
T ss_dssp HHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEE-EEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECC
T ss_pred eCC-chHHHHHHHHHHHHhccCCceEEEecCCcccce-EEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCC
Confidence 998 899999999999999999999987665554 55 999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccc
Q 011926 163 IKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLI 242 (475)
Q Consensus 163 ~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~ 242 (475)
++++.++++++.++|+||||++++|+++|+++|+.|+++|++++++||+|+|++.++++|+|||++|||++++++.++++
T Consensus 228 ~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l 307 (546)
T 3rtk_A 228 VKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTL 307 (546)
T ss_dssp STTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCS
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred cCCCccccceeEEEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHH
Q 011926 243 ENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETEL 322 (475)
Q Consensus 243 ~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l 322 (475)
+++++++||+|++|+++++++++|+||++++.+..|+++|+++++++.++|+|++|+||+++|+|++|||+|||+|+.++
T Consensus 308 ~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l 387 (546)
T 3rtk_A 308 ENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVEL 387 (546)
T ss_dssp TTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHH
T ss_pred ccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcCCcchhHHHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 011926 323 EDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVE 402 (475)
Q Consensus 323 ~E~~r~~~dal~~~~~~~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~ 402 (475)
+|++|+++||++++|+++++|+|||||++|+++|++|++++ .++. +|+++++|++||+.||++||+|||+|+.++++
T Consensus 388 ~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 464 (546)
T 3rtk_A 388 KERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGD-EATGANIVKVALEAPLKQIAFNSGLEPGVVAE 464 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTT-HHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999999999999999999999999987 5666 58999999999999999999999999999999
Q ss_pred hhhcCCCceeEecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHchhHHhhcCCCCCCC
Q 011926 403 KVKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 465 (475)
Q Consensus 403 ~l~~~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~~ 465 (475)
+|++....+|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|..+|+++++
T Consensus 465 ~l~~~~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~ 527 (546)
T 3rtk_A 465 KVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEKA 527 (546)
T ss_dssp HHHHSCTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC------------
T ss_pred HHHhhcCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999865669999999999999999999999999999999999999999999999999987653
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=9e-102 Score=823.57 Aligned_cols=460 Identities=49% Similarity=0.782 Sum_probs=445.6
Q ss_pred HHHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHH
Q 011926 3 CIDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVAT 82 (475)
Q Consensus 3 ~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ 82 (475)
.-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|+++.+.|.++|+
T Consensus 69 ~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~ 148 (547)
T 1kp8_A 69 GAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGT 148 (547)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCChhHHhHHHHHHHHhCCCCccccccCCCccchheeecceEEeecccCCccccCcccccceecceeEEEeccccCC
Q 011926 83 ISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISA 162 (475)
Q Consensus 83 ts~~~~~~l~~li~~a~~~~~~~g~I~v~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~~~~~i~~ 162 (475)
+|++++++|++++++|+.+++++|.|+++.|++++||+++++|++|+++|+||||++++++|+++++||+|+++|++|++
T Consensus 149 iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~ 228 (547)
T 1kp8_A 149 ISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISN 228 (547)
T ss_dssp HHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECC
T ss_pred HhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCC
Confidence 99998999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccc
Q 011926 163 IKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLI 242 (475)
Q Consensus 163 ~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~ 242 (475)
++++.++++++.++|+||||++++|+++|+++|+.|+++|.++|+|||+|+|+++++++|+|||++|||++++++.++++
T Consensus 229 ~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l 308 (547)
T 1kp8_A 229 IREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMEL 308 (547)
T ss_dssp GGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCS
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998788889
Q ss_pred cCCCccccceeEEEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHH
Q 011926 243 ENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETEL 322 (475)
Q Consensus 243 ~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l 322 (475)
+++++++||+|+.|+++++++++|+||++++.++.|+++++.+++.+.++|+|++|+||+++|+|++|||+|||+|+.++
T Consensus 309 ~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l 388 (547)
T 1kp8_A 309 EKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEM 388 (547)
T ss_dssp TTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHH
T ss_pred ccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcCCcchhHHHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 011926 323 EDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVE 402 (475)
Q Consensus 323 ~E~~r~~~dal~~~~~~~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~ 402 (475)
+|++|+++||++++|+++++|+|||||++|++++++|++++. ..+. +|+++++|++||+.||++|++|||+|+.++++
T Consensus 389 ~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~-~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~ 466 (547)
T 1kp8_A 389 KEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG-QNAD-QNVGIKVALRAMEAPLRQIVLNCGEEPSVVAN 466 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHH-HHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCch-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 999999999999999999999999999999999999999876 5555 58999999999999999999999999999999
Q ss_pred hhhcCCCceeEecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHchhHHhhcCCCCCC
Q 011926 403 KVKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 464 (475)
Q Consensus 403 ~l~~~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~ 464 (475)
+|++.+.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|..+|++++
T Consensus 467 ~l~~~~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~ 528 (547)
T 1kp8_A 467 TVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDA 528 (547)
T ss_dssp HHHHSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC---
T ss_pred HHHhcCCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccCC
Confidence 99987788999999999999999999999999999999999999999999999999987653
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.2e-101 Score=821.62 Aligned_cols=460 Identities=54% Similarity=0.818 Sum_probs=445.8
Q ss_pred HHHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHH
Q 011926 3 CIDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVAT 82 (475)
Q Consensus 3 ~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ 82 (475)
.-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|+++.+.|.++|+
T Consensus 69 ~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~ 148 (543)
T 1we3_A 69 GAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVAT 148 (543)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhh
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCChhHHhHHHHHHHHhCCCCccccccCCCccchheeecceEEeecccCCccccCcccccceecceeEEEeccccCC
Q 011926 83 ISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISA 162 (475)
Q Consensus 83 ts~~~~~~l~~li~~a~~~~~~~g~I~v~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~~~~~i~~ 162 (475)
+|++ +++|++++++|+.+++++|.|+++.|++++||+++++|++|+++|+||||++++++|+.+++||+|+++|++|++
T Consensus 149 iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~ 227 (543)
T 1we3_A 149 ISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSN 227 (543)
T ss_dssp HHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCC
T ss_pred hhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCC
Confidence 9997 999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccc
Q 011926 163 IKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLI 242 (475)
Q Consensus 163 ~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~ 242 (475)
++++.++++++.++|+||||++++|+++|+++|+.|+++|.++|+|||+|+|+++++++|+|||++|||+++++..++++
T Consensus 228 ~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l 307 (543)
T 1we3_A 228 VRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKL 307 (543)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCG
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998778889
Q ss_pred cCCCccccceeEEEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHH
Q 011926 243 ENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETEL 322 (475)
Q Consensus 243 ~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l 322 (475)
+++++++||+|+.|+++++++++|+||++++.+..|+++++.+++.+.++|+|++++||+++|+|++|||+|||+|+.++
T Consensus 308 ~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l 387 (543)
T 1we3_A 308 ENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETEL 387 (543)
T ss_dssp GGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHH
T ss_pred ccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcCCcchhHHHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 011926 323 EDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVE 402 (475)
Q Consensus 323 ~E~~r~~~dal~~~~~~~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~ 402 (475)
+|++|+++||++++|+++++|+|||||++|++++++|++++.+.++. +|+++++|++||+.||++|++|||+|+.++++
T Consensus 388 ~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 466 (543)
T 1we3_A 388 KEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGD-EATGAKIVRRALEEPARQIAENAGYEGSVIVQ 466 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHH-HHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCch-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 99999999999999999999999999999999999999998766776 58999999999999999999999999999999
Q ss_pred hhhc--CCCceeEecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHchhHHhhcCCCCCC
Q 011926 403 KVKD--SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 464 (475)
Q Consensus 403 ~l~~--~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~ 464 (475)
+|++ ++.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|..+|++.+
T Consensus 467 ~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~ 530 (543)
T 1we3_A 467 QILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKE 530 (543)
T ss_dssp HHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC--
T ss_pred HHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCC
Confidence 9998 5678999999999999999999999999999999999999999999999999987543
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2.7e-101 Score=820.38 Aligned_cols=460 Identities=52% Similarity=0.824 Sum_probs=402.9
Q ss_pred HHHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHH
Q 011926 3 CIDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVAT 82 (475)
Q Consensus 3 ~~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ 82 (475)
.-++++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|+++.+.|.++|+
T Consensus 70 ~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~ 149 (545)
T 1iok_A 70 GAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGT 149 (545)
T ss_dssp HHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHH
T ss_pred HHHHHHHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred HhccCChhHHhHHHHHHHHhCCCCccccccCCCccchheeecceEEeecccCCccccCcccccceecceeEEEeccccCC
Q 011926 83 ISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISA 162 (475)
Q Consensus 83 ts~~~~~~l~~li~~a~~~~~~~g~I~v~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~~~~~i~~ 162 (475)
+|++++++|++++++|+.+++++|.|+++.|++++||+++++|++|+++|+||||++++++|+.+++||+|+++|++|++
T Consensus 150 iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~ 229 (545)
T 1iok_A 150 ISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSS 229 (545)
T ss_dssp HTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCC
T ss_pred hhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCC
Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccc
Q 011926 163 IKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLI 242 (475)
Q Consensus 163 ~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~ 242 (475)
++++.++++++.++|+||||++++|+++|+++|+.|+++|.++|+|||+|+|+++++++|+|||++|||++++++.++++
T Consensus 230 ~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l 309 (545)
T 1iok_A 230 LQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKL 309 (545)
T ss_dssp CCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC-----------
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998778889
Q ss_pred cCCCccccceeEEEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHH
Q 011926 243 ENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETEL 322 (475)
Q Consensus 243 ~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l 322 (475)
+++++++||+|++|++++++|++|+||++++.+++|+++++.+++.+.++|+|++|+||+++|+|++|||+|||+|++++
T Consensus 310 ~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l 389 (545)
T 1iok_A 310 ENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEV 389 (545)
T ss_dssp ----CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHH
T ss_pred ccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcCCcchhHHHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 011926 323 EDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVE 402 (475)
Q Consensus 323 ~E~~r~~~dal~~~~~~~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~ 402 (475)
+|++|+++||++++|+++++|+|||||++|++++++|++++. .++. +|+++++|++||+.||++|++|||+|+.++++
T Consensus 390 ~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 467 (545)
T 1iok_A 390 KERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSD-QDAGIAIIRRALEAPMRQIAENAGVDGAVVAG 467 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHH-HHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCch-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 999999999999999999999999999999999999999876 5565 58999999999999999999999999999999
Q ss_pred hhhcC-CCceeEecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHchhHHhhcCCCCCC
Q 011926 403 KVKDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 464 (475)
Q Consensus 403 ~l~~~-~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~ 464 (475)
+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|..+|++++
T Consensus 468 ~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~ 530 (545)
T 1iok_A 468 KVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKA 530 (545)
T ss_dssp HHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC----
T ss_pred HHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCC
Confidence 99986 678999999999999999999999999999999999999999999999999987553
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.1e-87 Score=718.18 Aligned_cols=429 Identities=20% Similarity=0.283 Sum_probs=365.3
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHh-hhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLS-VTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAV 80 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~~~~l~~v 80 (475)
-+|++++|++||+++||||||+||||++||+++.++ +.+|+||+.|++||++|++.++++|+++++|++ +.+.|.++
T Consensus 75 Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~v 154 (590)
T 3p9d_C 75 AKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKL 154 (590)
T ss_dssp HHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHH
T ss_pred HHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHH
Confidence 478999999999999999999999999999999999 999999999999999999999999999999987 46789999
Q ss_pred HHHhcc------CChhHHhHHHHHHHHhCCCCc----------------ccc--ccCCCccchheeecceEEeecccCCc
Q 011926 81 ATISAG------NDDLIGTMIADAIDKVGPDGV----------------LSI--ESSSSFETTVEVEEGMEIDRGYISPQ 136 (475)
Q Consensus 81 a~ts~~------~~~~l~~li~~a~~~~~~~g~----------------I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~ 136 (475)
|+||++ ++++|++++++|+.++++++. |++ .+|+++.|| ++++|++|++++.+|
T Consensus 155 A~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~- 232 (590)
T 3p9d_C 155 IQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP- 232 (590)
T ss_dssp HTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT-
T ss_pred HHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC-
Confidence 998864 478999999999999987642 444 469999999 999999999998876
Q ss_pred cccCcccccceecceeEEEecccc-------------CCHHhhHH-----------HHHHHHhcCCCEEEEeccCChHHH
Q 011926 137 FVTNPEKLIVEFENARVLVTDQKI-------------SAIKDIIP-----------LLEKTTQLRAPLLIIAEDVTGEAL 192 (475)
Q Consensus 137 ~~~~~~~~~~~~~~~~Il~~~~~i-------------~~~~~l~~-----------~le~i~~~~~~lvi~~~~i~~~al 192 (475)
+|+++++||||+++|++| ++++++.+ +++++.+.|++|||++++|++.|+
T Consensus 233 ------~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al 306 (590)
T 3p9d_C 233 ------KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQ 306 (590)
T ss_dssp ------TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHH
T ss_pred ------CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHH
Confidence 488899999999999964 44555544 357889999999999999999999
Q ss_pred HHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccce-eEEEE---EecceEEEEeC
Q 011926 193 ATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGT-ARKVT---IRKDSTTIIAD 268 (475)
Q Consensus 193 ~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~-~~~v~---i~~~~~~~~~~ 268 (475)
++|.++++ .+|+++++.+|+|||++|||++++ +++++++++||+ |+.|+ +++++|++|+|
T Consensus 307 ~~L~k~~I-----------~av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g 370 (590)
T 3p9d_C 307 HYLLKGGC-----------SVLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDN 370 (590)
T ss_dssp HHHHHTTC-----------CCCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC
T ss_pred HHHHhccc-----------eeeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeC
Confidence 99999873 558899999999999999999999 899999999999 99997 57899999999
Q ss_pred CCChHH--------------------------HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHH
Q 011926 269 AASKDE--------------------------IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETEL 322 (475)
Q Consensus 269 ~~~~~~--------------------------i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l 322 (475)
|++++. ++.|+++++.+++.+.++|+++ +++|+|++|||+|||+|++++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l 445 (590)
T 3p9d_C 371 CKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDIL 445 (590)
T ss_dssp --------------------------------------------------------------CCCSCCCEEEECSSTTTH
T ss_pred CCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHH
Confidence 998887 9999999999999999999866 578999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHH
Q 011926 323 EDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVV 401 (475)
Q Consensus 323 ~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l 401 (475)
+|++|+++||++++|+++++| +|||||++|+++|++|++++.+..+.+ |+++++|++||+.||++||+|||+|+.+++
T Consensus 446 ~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv 524 (590)
T 3p9d_C 446 NEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQ-QWPYQAVADAMECIPRTLIQNAGGDPIRLL 524 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTT-HHHHHHHHHHTTHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 999999999999999999996 999999999999999999887777875 899999999999999999999999999999
Q ss_pred Hhhhc----CCCceeEecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHchhHHhhcCCCC
Q 011926 402 EKVKD----SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKP 462 (475)
Q Consensus 402 ~~l~~----~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~ 462 (475)
++|++ +++++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||+|++|..+|++
T Consensus 525 ~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 589 (590)
T 3p9d_C 525 SQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQ 589 (590)
T ss_dssp HHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC--
T ss_pred HHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99987 36789999999999999999999999999999999999999999999999887753
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.5e-85 Score=699.90 Aligned_cols=405 Identities=24% Similarity=0.346 Sum_probs=367.3
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVA 81 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~~~~l~~va 81 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|++++++++ |.+.|.++|
T Consensus 75 Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va 154 (543)
T 3ruv_A 75 AKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIA 154 (543)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999987 788999999
Q ss_pred HHhcc------CChhHHhHHHHHHHHhCCC-Cc-----ccc--ccCCCccchheeecceEEeecccCCccccCcccccce
Q 011926 82 TISAG------NDDLIGTMIADAIDKVGPD-GV-----LSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVE 147 (475)
Q Consensus 82 ~ts~~------~~~~l~~li~~a~~~~~~~-g~-----I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~ 147 (475)
+||++ ++++|++++++|+.+++++ |. |++ ..|+++.|| ++++|++|+++|.||+ |+++
T Consensus 155 ~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~ 226 (543)
T 3ruv_A 155 MTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQ-------MPKK 226 (543)
T ss_dssp HHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTT-------SCSE
T ss_pred HHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCcc-------cccc
Confidence 99986 4899999999999999987 64 665 378899998 9999999999999997 5678
Q ss_pred ecceeEEEeccc-------------cCCHHh-----------hHHHHHHHHhcCCCEEEEeccCChHHHHHHHHhccccc
Q 011926 148 FENARVLVTDQK-------------ISAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGI 203 (475)
Q Consensus 148 ~~~~~Il~~~~~-------------i~~~~~-----------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~ 203 (475)
++||||+++|++ |+++++ +.++++++.++|+||||++++|++.++++|.+++
T Consensus 227 ~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~g---- 302 (543)
T 3ruv_A 227 VTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEG---- 302 (543)
T ss_dssp EEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTT----
T ss_pred ccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcC----
Confidence 999999999996 455555 5577899999999999999999999999999766
Q ss_pred ceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEEe---cceEEEEeCCCChHHHHHHHH
Q 011926 204 LNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEIQARIA 280 (475)
Q Consensus 204 ~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~i~ 280 (475)
+++| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|+++
T Consensus 303 --I~~v-----~~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------- 362 (543)
T 3ruv_A 303 --IVAA-----RRVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP-------- 362 (543)
T ss_dssp --CEEE-----CSCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC--------
T ss_pred --cEEE-----eeCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC--------
Confidence 3443 477899999999999999999 8999999999999999864 8899999999874
Q ss_pred HHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHhHhh
Q 011926 281 QLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHV 359 (475)
Q Consensus 281 ~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls~~L 359 (475)
..|||+|||+|+++++|++|+++||++++|+++++| +|||||++|+++|++|
T Consensus 363 ---------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L 415 (543)
T 3ruv_A 363 ---------------------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL 415 (543)
T ss_dssp ---------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHH
T ss_pred ---------------------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHH
Confidence 379999999999999999999999999999999999 9999999999999999
Q ss_pred hhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC-----CCceeEecCCCcccccccCcccccHHH
Q 011926 360 PAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS-----EWTTGYNAMTDKYENMLQAGVIDPAKV 434 (475)
Q Consensus 360 ~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~-----~~~~G~d~~~g~i~d~~~~gI~Dp~~v 434 (475)
++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.|
T Consensus 416 ~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~v 494 (543)
T 3ruv_A 416 REYAEGISGRE-QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRV 494 (543)
T ss_dssp HHHHHTCCTTH-HHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHH
T ss_pred HHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHH
Confidence 99988888875 899999999999999999999999999999999872 368999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHchhHHhhcCCCCCCCCCC
Q 011926 435 TRCALQNAASVAGMVLTTQAIVVEKPKPKTPVAA 468 (475)
Q Consensus 435 k~~~l~~A~e~a~~lL~iD~iI~~~p~~~~~~~~ 468 (475)
|+++|++|+|+|++|||||++|..+|++.|++++
T Consensus 495 k~~al~~A~~~a~~iL~id~ii~~~~~~~~~~~~ 528 (543)
T 3ruv_A 495 KTQAIQSAAESTEMLLRIDDVIAAEKLRGAPDMG 528 (543)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEC---------
T ss_pred HHHHHHHHHHHHHHHHhHHhheecCccCCCCCCC
Confidence 9999999999999999999999999987654433
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=3.8e-85 Score=698.74 Aligned_cols=401 Identities=21% Similarity=0.322 Sum_probs=366.6
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVA 81 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~~~~l~~va 81 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++++++++ |.+.|.++|
T Consensus 86 Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA 165 (553)
T 3ko1_A 86 AKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIA 165 (553)
T ss_dssp HHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHH
T ss_pred HHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999987 788999999
Q ss_pred HHhccC------ChhHHhHHHHHHHHhCCC--Cc-------ccc--ccCCCccchheeecceEEeecccCCccccCcccc
Q 011926 82 TISAGN------DDLIGTMIADAIDKVGPD--GV-------LSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKL 144 (475)
Q Consensus 82 ~ts~~~------~~~l~~li~~a~~~~~~~--g~-------I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~ 144 (475)
+||+++ +++|++++++|+.+++++ |. |++ ..|+++.|| ++++|++|+++|.||+ |
T Consensus 166 ~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m 237 (553)
T 3ko1_A 166 MTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPG-------M 237 (553)
T ss_dssp HHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTT-------S
T ss_pred HHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCC-------C
Confidence 999874 789999999999999885 65 665 378899998 9999999999999997 5
Q ss_pred cceecceeEEEeccc-------------cCCHHh-----------hHHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcc
Q 011926 145 IVEFENARVLVTDQK-------------ISAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKL 200 (475)
Q Consensus 145 ~~~~~~~~Il~~~~~-------------i~~~~~-----------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~ 200 (475)
+++++||||+++|++ |+++++ +.++++++.++|+||||++++|++.++++|.+++
T Consensus 238 ~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~g- 316 (553)
T 3ko1_A 238 PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKG- 316 (553)
T ss_dssp CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHT-
T ss_pred ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcc-
Confidence 678999999999995 566766 4567899999999999999999999999999876
Q ss_pred cccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEEe---cceEEEEeCCCChHHHHH
Q 011926 201 RGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEIQA 277 (475)
Q Consensus 201 ~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~ 277 (475)
+++| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+||+||+++
T Consensus 317 -----I~~v-----~~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~----- 376 (553)
T 3ko1_A 317 -----VLAV-----RRAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP----- 376 (553)
T ss_dssp -----CEEE-----CCCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS-----
T ss_pred -----hhhh-----hhhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCC-----
Confidence 3343 477899999999999999999 8999999999999999964 8899999999875
Q ss_pred HHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHh
Q 011926 278 RIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLS 356 (475)
Q Consensus 278 ~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls 356 (475)
..|||+|||+|+++++|++|+++||++++|+++++| +|||||++|++++
T Consensus 377 ------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s 426 (553)
T 3ko1_A 377 ------------------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIA 426 (553)
T ss_dssp ------------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHH
T ss_pred ------------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHH
Confidence 379999999999999999999999999999999999 9999999999999
Q ss_pred HhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----C-CceeEecCCCcccccccCccccc
Q 011926 357 DHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----E-WTTGYNAMTDKYENMLQAGVIDP 431 (475)
Q Consensus 357 ~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~-~~~G~d~~~g~i~d~~~~gI~Dp 431 (475)
++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++.+|++. + +++|||+.+|++.||++.|||||
T Consensus 427 ~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp 505 (553)
T 3ko1_A 427 KKLRKYAPQVGGKE-QLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEP 505 (553)
T ss_dssp HHHHHHHHHHCSHH-HHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEE
T ss_pred HHHHHhccccCChh-HhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccch
Confidence 99999987777875 899999999999999999999999999999999874 2 67999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHchhHHhhcCCCCCC
Q 011926 432 AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 464 (475)
Q Consensus 432 ~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~ 464 (475)
+.||+++|++|+|+|++|||||++|..+|++.+
T Consensus 506 ~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 538 (553)
T 3ko1_A 506 ALVKMNAIKAATEAATLVLRIDDVVSAGKKSGG 538 (553)
T ss_dssp TTHHHHHHHHHHHHHHHHHHEEEECCC------
T ss_pred hhhhhhhhhhcchhheEEEehHHHHHhhhhccC
Confidence 999999999999999999999999999887654
No 8
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.8e-84 Score=684.01 Aligned_cols=399 Identities=18% Similarity=0.252 Sum_probs=367.3
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--C----HHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--G----RDDI 77 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~----~~~l 77 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++ + .+.|
T Consensus 67 Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L 146 (515)
T 3iyg_H 67 AKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLL 146 (515)
T ss_pred HHHHHHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999984 5 5678
Q ss_pred HHHHHHhcc------CChhHHhHHHHHHHHhCCC---Ccccc--ccCCCccchheeecceEEeecccCCccccCcccccc
Q 011926 78 KAVATISAG------NDDLIGTMIADAIDKVGPD---GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIV 146 (475)
Q Consensus 78 ~~va~ts~~------~~~~l~~li~~a~~~~~~~---g~I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~ 146 (475)
.++|+||++ ++++|++++++|+.+++.+ ++|++ ..|++..|| ++++|++|+++|.||||++ +|+
T Consensus 147 ~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~----~p~ 221 (515)
T 3iyg_H 147 EKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEM----QPK 221 (515)
T ss_pred HHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCccccc----CCc
Confidence 999999874 5789999999999999876 67776 468899999 9999999999999999964 456
Q ss_pred eecceeEEEeccc-------------cCCHHhh-----------HHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcccc
Q 011926 147 EFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRG 202 (475)
Q Consensus 147 ~~~~~~Il~~~~~-------------i~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g 202 (475)
+++||||+++|++ |++++++ .++++++.+.|+||||++++|++.++++|.++++
T Consensus 222 ~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI-- 299 (515)
T 3iyg_H 222 KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDM-- 299 (515)
T ss_pred cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCC--
Confidence 8999999999996 5666665 5679999999999999999999999999987663
Q ss_pred cceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE---ecceEEEEeCCCChHHHHHHH
Q 011926 203 ILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQARI 279 (475)
Q Consensus 203 ~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~~i 279 (475)
.+++++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|+||+++
T Consensus 300 ---------~~v~~~~k~~leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------- 358 (515)
T 3iyg_H 300 ---------FCAGRVPEEDLKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA------- 358 (515)
T ss_pred ---------cccccccHHHHHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC-------
Confidence 346789999999999999999999 899999999999999986 47899999999764
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHhHh
Q 011926 280 AQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDH 358 (475)
Q Consensus 280 ~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls~~ 358 (475)
..|||+|||+|+++++|++|+++||++++|++++++ +|||||++|+++|++
T Consensus 359 ----------------------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~ 410 (515)
T 3iyg_H 359 ----------------------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKY 410 (515)
T ss_pred ----------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHH
Confidence 479999999999999999999999999999999996 999999999999999
Q ss_pred hhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccCcccccHHH
Q 011926 359 VPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKV 434 (475)
Q Consensus 359 L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~v 434 (475)
|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.|
T Consensus 411 L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~v 489 (515)
T 3iyg_H 411 LRDYSRTIPGKQ-QLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMV 489 (515)
T ss_pred HHHHHhcCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHH
Confidence 999988888875 899999999999999999999999999999999883 457999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHchhHHhhcC
Q 011926 435 TRCALQNAASVAGMVLTTQAIVVEK 459 (475)
Q Consensus 435 k~~~l~~A~e~a~~lL~iD~iI~~~ 459 (475)
|+++|++|+|+|++|||||++|+++
T Consensus 490 k~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 490 RINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999753
No 9
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.7e-84 Score=687.75 Aligned_cols=402 Identities=21% Similarity=0.305 Sum_probs=344.3
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVA 81 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~~~~l~~va 81 (475)
-++++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|++++++++ |.+.|.++|
T Consensus 29 Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va 108 (500)
T 3aq1_B 29 AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREILETITIAISPDDEAALIKIA 108 (500)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999986 588999999
Q ss_pred HHhcc------CChhHHhHHHHHHHHhCCC--Cc--------cccc--cCCCccchheeecceEEeecccCCccccCccc
Q 011926 82 TISAG------NDDLIGTMIADAIDKVGPD--GV--------LSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEK 143 (475)
Q Consensus 82 ~ts~~------~~~~l~~li~~a~~~~~~~--g~--------I~v~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~ 143 (475)
+||++ ++++|++++++|+.+++++ |. |+++ +|+++.|| ++++|++|+++|.||+
T Consensus 109 ~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~------- 180 (500)
T 3aq1_B 109 GTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDS-ELIDGLVIDKERSHPN------- 180 (500)
T ss_dssp HTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGC-EEESEEEESCCCSSTT-------
T ss_pred HHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccce-EEEeeeEEeecCCCCC-------
Confidence 98854 6899999999999999865 43 4554 89999998 9999999999999996
Q ss_pred ccceecceeEEEeccc-------------cCCHHhh-----------HHHHHHHHhcCCCEEEEeccCChHHHHHHHHhc
Q 011926 144 LIVEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNK 199 (475)
Q Consensus 144 ~~~~~~~~~Il~~~~~-------------i~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~ 199 (475)
|+++++||||+++|++ |++++++ .++++++.++|+||||++++|+++|+++|.+++
T Consensus 181 m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~ 260 (500)
T 3aq1_B 181 MPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAG 260 (500)
T ss_dssp SCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT
T ss_pred CcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC
Confidence 4678999999999999 5666665 789999999999999999999999999999987
Q ss_pred ccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEEe---cceEEEEeCCCChHHHH
Q 011926 200 LRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEIQ 276 (475)
Q Consensus 200 ~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~ 276 (475)
++|| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|++|+||+++
T Consensus 261 ------I~av-----~~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~---- 320 (500)
T 3aq1_B 261 ------IYAV-----RRVKKSDLKRLSKVTGATIIQ-----DLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNS---- 320 (500)
T ss_dssp ------CEEE-----CSCCHHHHHHHHHHHCCCCBS-----CTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETTC----
T ss_pred ------EEEE-----EeCCHHHHHHHHHHhCCeEec-----ccccCCHhHCCCceEEEEEEecCeEEEEEECCCCC----
Confidence 4554 588999999999999999999 8999999999999999974 8999999998763
Q ss_pred HHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHH
Q 011926 277 ARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHL 355 (475)
Q Consensus 277 ~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~l 355 (475)
+.|||+|||+|+++++|++|+++||++++|+++++| +|||||++|+++
T Consensus 321 -------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~ 369 (500)
T 3aq1_B 321 -------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVEL 369 (500)
T ss_dssp -------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHH
T ss_pred -------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHH
Confidence 589999999999999999999999999999999999 999999999999
Q ss_pred hHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccCccccc
Q 011926 356 SDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDP 431 (475)
Q Consensus 356 s~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~Dp 431 (475)
+++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. +.++|||+.+|++.||++.|||||
T Consensus 370 ~~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp 448 (500)
T 3aq1_B 370 SLRLSEYASTLKGRE-QLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEP 448 (500)
T ss_dssp HHHHHHHHHTCCSHH-HHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEE
T ss_pred HHHHHHHhhhcCchH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCC
Confidence 999999988788874 899999999999999999999999999999999962 458999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHchhHHhhcCCCCCCC
Q 011926 432 AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 465 (475)
Q Consensus 432 ~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~~ 465 (475)
+.||+++|++|+|+|++|||+|++|..+|+++++
T Consensus 449 ~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 482 (500)
T 3aq1_B 449 LRIKTQAINAAMEATVMILRIDDVVASKGSANQG 482 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 9999999999999999999999999999876543
No 10
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.3e-83 Score=682.89 Aligned_cols=397 Identities=19% Similarity=0.294 Sum_probs=366.9
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC-----CHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE-----GRDDIK 78 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~-----~~~~l~ 78 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +.+.|.
T Consensus 68 Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~ 147 (513)
T 3iyg_B 68 AKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLM 147 (513)
T ss_pred HHHHHHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999986 567899
Q ss_pred HHHHHhcc------CChhHHhHHHHHHHHhCCC---Ccccc--ccCCCccchheeecceEEeecccCCccccCcccccce
Q 011926 79 AVATISAG------NDDLIGTMIADAIDKVGPD---GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVE 147 (475)
Q Consensus 79 ~va~ts~~------~~~~l~~li~~a~~~~~~~---g~I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~ 147 (475)
++|+||++ ++++|++++++|+.+++++ ++|++ ..|+++.|| ++++|++|+++|.|| |+++
T Consensus 148 ~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~ 218 (513)
T 3iyg_B 148 NIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKR 218 (513)
T ss_pred HHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------Ccee
Confidence 99998874 5689999999999999987 77776 369999999 999999999999886 6788
Q ss_pred ecceeEEEeccc--------------cCCHHhhH-----------HHHHHHHhcCCCEEEEeccCChHHHHHHHHhcccc
Q 011926 148 FENARVLVTDQK--------------ISAIKDII-----------PLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRG 202 (475)
Q Consensus 148 ~~~~~Il~~~~~--------------i~~~~~l~-----------~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g 202 (475)
++||||+++|++ +++++++. ++++++.++|+||||++++|++.++++|.+++
T Consensus 219 ~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~--- 295 (513)
T 3iyg_B 219 IENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAG--- 295 (513)
T ss_pred ecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcC---
Confidence 999999999994 45666654 47899999999999999999999999999876
Q ss_pred cceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEE---EecceEEEEeCCCChHHHHHHH
Q 011926 203 ILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT---IRKDSTTIIADAASKDEIQARI 279 (475)
Q Consensus 203 ~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~i 279 (475)
++||+.+ ++++|+|||++|||++++ +++++++++||+|++|+ ++++++++|+||++
T Consensus 296 ---I~av~~~-----~~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-------- 354 (513)
T 3iyg_B 296 ---VMAIEHA-----DFVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL-------- 354 (513)
T ss_pred ---ceEEecC-----CHHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC--------
Confidence 6777654 468999999999999999 89999999999999998 67899999999975
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHhHh
Q 011926 280 AQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDH 358 (475)
Q Consensus 280 ~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls~~ 358 (475)
+++|||+|||+|+++++|++|+++||++++|++++++ +|||||++|++++++
T Consensus 355 ---------------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~ 407 (513)
T 3iyg_B 355 ---------------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHA 407 (513)
T ss_pred ---------------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHH
Confidence 3589999999999999999999999999999999996 999999999999999
Q ss_pred hhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccCcccccHHH
Q 011926 359 VPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKV 434 (475)
Q Consensus 359 L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~v 434 (475)
|++++.+.++.+ |+++++|++||+.||++|++|||+|+.+++++|++. ++++|||+.+|++.||++.|||||+.|
T Consensus 408 L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~v 486 (513)
T 3iyg_B 408 VTQLASRTPGKE-AVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQV 486 (513)
T ss_pred HHHHhhccCcHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHH
Confidence 999988788874 899999999999999999999999999999999873 568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHchhHHhhcCCC
Q 011926 435 TRCALQNAASVAGMVLTTQAIVVEKPK 461 (475)
Q Consensus 435 k~~~l~~A~e~a~~lL~iD~iI~~~p~ 461 (475)
|+++|++|+|+|++|||+|++|..+|+
T Consensus 487 k~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 487 KRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999998875
No 11
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.9e-84 Score=693.66 Aligned_cols=401 Identities=21% Similarity=0.327 Sum_probs=367.0
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCCC--HHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEG--RDDIKAVA 81 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~~--~~~l~~va 81 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++++++++. .+.|.++|
T Consensus 77 Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va 156 (543)
T 1a6d_B 77 AKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMA 156 (543)
T ss_dssp HHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999873 78899999
Q ss_pred HHhcc------CChhHHhHHHHHHHHhCCC--C-------ccccc--cCCCccchheeecceEEeecccCCccccCcccc
Q 011926 82 TISAG------NDDLIGTMIADAIDKVGPD--G-------VLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKL 144 (475)
Q Consensus 82 ~ts~~------~~~~l~~li~~a~~~~~~~--g-------~I~v~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~ 144 (475)
+|+++ ++++|++++++|+.+++++ | +|+++ +|++++|| ++++|++|+++|.||+|
T Consensus 157 ~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m------- 228 (543)
T 1a6d_B 157 QTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM------- 228 (543)
T ss_dssp HHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------
T ss_pred HHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC-------
Confidence 98864 4789999999999999876 5 26664 89999999 99999999999999974
Q ss_pred cceecceeEEEeccc-------------cCCHHhh-----------HHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcc
Q 011926 145 IVEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKL 200 (475)
Q Consensus 145 ~~~~~~~~Il~~~~~-------------i~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~ 200 (475)
+++++||||+++|++ |++++++ .++++++.++|+||||++++|+++|+++|.+++
T Consensus 229 ~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~- 307 (543)
T 1a6d_B 229 PDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG- 307 (543)
T ss_dssp CSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT-
T ss_pred cceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC-
Confidence 678999999999998 6667765 788999999999999999999999999999987
Q ss_pred cccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE---ecceEEEEeCCCChHHHHH
Q 011926 201 RGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQA 277 (475)
Q Consensus 201 ~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~ 277 (475)
++|| +++++++|+|||++|||++++ +++++++++||+|+.|++ ++++|++|+||+++
T Consensus 308 -----I~av-----~~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~----- 367 (543)
T 1a6d_B 308 -----IYAV-----RRVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP----- 367 (543)
T ss_dssp -----CEEE-----CSCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS-----
T ss_pred -----eeEe-----ccCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC-----
Confidence 4554 588999999999999999999 899999999999999986 48999999998763
Q ss_pred HHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHh
Q 011926 278 RIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLS 356 (475)
Q Consensus 278 ~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls 356 (475)
+.|||+|||+|+++++|++|+++||++++|+++++| +|||||++|++++
T Consensus 368 ------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s 417 (543)
T 1a6d_B 368 ------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIA 417 (543)
T ss_dssp ------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHH
T ss_pred ------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHH
Confidence 589999999999999999999999999999999999 9999999999999
Q ss_pred HhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccCcccccH
Q 011926 357 DHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPA 432 (475)
Q Consensus 357 ~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~ 432 (475)
++|++++.+.++.+ |+++++|++||+.||++|++|||+|+.+++++|++. +.++|||+.+|++.||++.|||||+
T Consensus 418 ~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 496 (543)
T 1a6d_B 418 FRLRSYAQKIGGRQ-QLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPI 496 (543)
T ss_dssp HHHHHHHHHTCSSH-HHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEH
T ss_pred HHHHHHhhhcCChH-HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecH
Confidence 99999987777874 899999999999999999999999999999999962 4689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHchhHHhhcCCCCCC
Q 011926 433 KVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 464 (475)
Q Consensus 433 ~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~ 464 (475)
.||+++|+.|+|+|++|||+|++|..+|++.|
T Consensus 497 ~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~ 528 (543)
T 1a6d_B 497 RVGKQAIESATEAAIMILRIDDVIATKSSSSS 528 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEEEC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccCCC
Confidence 99999999999999999999999999887543
No 12
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.1e-84 Score=686.47 Aligned_cols=402 Identities=21% Similarity=0.249 Sum_probs=364.8
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHh-ccccCC--CHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEK-RARPIE--GRDDIKAV 80 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~~~~i~--~~~~l~~v 80 (475)
-+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++||+.|++.++++|++ ++++++ +.+.|.++
T Consensus 66 akll~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~v 145 (529)
T 3iyg_A 66 AKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINA 145 (529)
T ss_pred HHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999 999987 78899999
Q ss_pred HHHhcc------CChhHHhHHHHHHHHhC---CCC-----c--ccc--ccCCCccchheeecceEEeecccCCccccCcc
Q 011926 81 ATISAG------NDDLIGTMIADAIDKVG---PDG-----V--LSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPE 142 (475)
Q Consensus 81 a~ts~~------~~~~l~~li~~a~~~~~---~~g-----~--I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~ 142 (475)
|+||++ ++++|++++++|+.+++ ++| . |++ .+|+++.|| ++++|++|+++|.||+
T Consensus 146 a~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~------ 218 (529)
T 3iyg_A 146 AKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG------ 218 (529)
T ss_pred HHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc------
Confidence 999974 57999999999999997 334 1 554 589999999 9999999999999986
Q ss_pred cccceecceeEEEeccccC-------------CHHh-----------hHHHHHHHHhcCCCEEEEeccCChHHHHHHHHh
Q 011926 143 KLIVEFENARVLVTDQKIS-------------AIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVN 198 (475)
Q Consensus 143 ~~~~~~~~~~Il~~~~~i~-------------~~~~-----------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~ 198 (475)
|+++++||||++++++++ ++++ +.++++++.++|+||||++++|++.++++|.+|
T Consensus 219 -m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~ 297 (529)
T 3iyg_A 219 -MPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA 297 (529)
T ss_pred -CCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc
Confidence 567899999999999753 3333 457789999999999999999999999999998
Q ss_pred cccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCcc-ccCCCccccceeEEEE---EecceEEEEeCCCChHH
Q 011926 199 KLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLL-IENTSVEQLGTARKVT---IRKDSTTIIADAASKDE 274 (475)
Q Consensus 199 ~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~-~~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~ 274 (475)
+ ++| ++++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++++||+||+++
T Consensus 298 g------I~a-----v~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-- 364 (529)
T 3iyg_A 298 G------AMA-----VRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR-- 364 (529)
T ss_pred C------Cce-----eccCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC--
Confidence 7 344 4578999999999999999999544433 2445678999999998 689999999999764
Q ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHH
Q 011926 275 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALV 353 (475)
Q Consensus 275 i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~ 353 (475)
+.|||+|||+|+++++|.+|+++||++++|+++++| +|||||++|+
T Consensus 365 ---------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~ 411 (529)
T 3iyg_A 365 ---------------------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEA 411 (529)
T ss_pred ---------------------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHH
Confidence 489999999999999999999999999999999999 9999999999
Q ss_pred HHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----C--------CceeEecCCCccc
Q 011926 354 HLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----E--------WTTGYNAMTDKYE 421 (475)
Q Consensus 354 ~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~--------~~~G~d~~~g~i~ 421 (475)
++|++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. + .++|||+.+|++.
T Consensus 412 ~ls~~L~~~~~~~~g~e-q~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~ 490 (529)
T 3iyg_A 412 ALSIYLENYATSMGSRE-QLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPR 490 (529)
T ss_pred HHHHHHHHHhhhcCChH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCcc
Confidence 99999999998888875 899999999999999999999999999999999873 2 5799999999999
Q ss_pred ccccCcccccHHHHHHHHHHHHHHHHHHHchhHHhhcCC
Q 011926 422 NMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP 460 (475)
Q Consensus 422 d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p 460 (475)
||++.|||||+.||+++|++|+|+|++|||||++|+.+|
T Consensus 491 d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 491 DNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred ChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 999999999999999999999999999999999998754
No 13
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=3.5e-84 Score=691.80 Aligned_cols=401 Identities=22% Similarity=0.364 Sum_probs=370.0
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVA 81 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~~~~l~~va 81 (475)
-++++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|++++++++ |.+.|.++|
T Consensus 79 Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va 158 (548)
T 1q3q_A 79 AKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIA 158 (548)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999986 488999999
Q ss_pred HHhcc------CChhHHhHHHHHHHHhCCC--C-------ccccc--cCCCccchheeecceEEeecccCCccccCcccc
Q 011926 82 TISAG------NDDLIGTMIADAIDKVGPD--G-------VLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKL 144 (475)
Q Consensus 82 ~ts~~------~~~~l~~li~~a~~~~~~~--g-------~I~v~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~ 144 (475)
+|+++ ++++|++++++|+.+++++ | +|+++ +|++++|| ++++|++|+++|.||+|
T Consensus 159 ~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m------- 230 (548)
T 1q3q_A 159 ATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM------- 230 (548)
T ss_dssp HHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------
T ss_pred HHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------
Confidence 99864 4789999999999999875 4 57765 89999999 99999999999999974
Q ss_pred cceecceeEEEeccc-------------cCCHHhh-----------HHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcc
Q 011926 145 IVEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKL 200 (475)
Q Consensus 145 ~~~~~~~~Il~~~~~-------------i~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~ 200 (475)
+++++||||+++|++ |++++++ .++++++.++|+||||++++|+++|+++|.+++
T Consensus 231 ~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~- 309 (548)
T 1q3q_A 231 PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG- 309 (548)
T ss_dssp CSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT-
T ss_pred cceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC-
Confidence 578999999999998 6777775 788999999999999999999999999999987
Q ss_pred cccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEEe---cceEEEEeCCCChHHHHH
Q 011926 201 RGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEIQA 277 (475)
Q Consensus 201 ~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~ 277 (475)
++|| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 310 -----I~av-----~~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~----- 369 (548)
T 1q3q_A 310 -----IMAV-----RRVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP----- 369 (548)
T ss_dssp -----CEEE-----CSCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSC-----
T ss_pred -----cEEE-----ccCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC-----
Confidence 4554 588999999999999999999 8999999999999999864 8999999999763
Q ss_pred HHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHh
Q 011926 278 RIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLS 356 (475)
Q Consensus 278 ~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls 356 (475)
+.|||+|||+|+++++|++|+++||++++|+++++| +|||||++|++++
T Consensus 370 ------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~ 419 (548)
T 1q3q_A 370 ------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELA 419 (548)
T ss_dssp ------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHH
T ss_pred ------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHH
Confidence 589999999999999999999999999999999999 9999999999999
Q ss_pred HhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccCcccccH
Q 011926 357 DHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPA 432 (475)
Q Consensus 357 ~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~ 432 (475)
++|++++.+.++. +|+++++|++||+.||++||+|||+|+.+++++|++. +.++|||+.+|++.||++.|||||+
T Consensus 420 ~~L~~~~~~~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 498 (548)
T 1q3q_A 420 IRLDEYAKQVGGK-EALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPL 498 (548)
T ss_dssp HHHHHHHHHHCHH-HHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEH
T ss_pred HHHHHHhhhcCCc-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecH
Confidence 9999998766676 5899999999999999999999999999999999963 4689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHchhHHhhcCCCCCC
Q 011926 433 KVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 464 (475)
Q Consensus 433 ~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~ 464 (475)
.||+++|+.|+|+|++|||+|++|..+|++++
T Consensus 499 ~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 530 (548)
T 1q3q_A 499 RVKKQAIKSASEAAIMILRIDDVIAAKATKPE 530 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 99999999999999999999999999887543
No 14
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=3.9e-84 Score=691.03 Aligned_cols=398 Identities=22% Similarity=0.336 Sum_probs=365.7
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC-CHHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE-GRDDIKAVAT 82 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~-~~~~l~~va~ 82 (475)
-++++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++| + +.+.|.++|+
T Consensus 78 Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~ 156 (545)
T 1a6d_A 78 AKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIAL 156 (545)
T ss_dssp HHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999 7 7889999999
Q ss_pred Hhcc------CChhHHhHHHHHHHHhCCC---------Cccccc--cCCCccchheeecceEEeecccCCccccCccccc
Q 011926 83 ISAG------NDDLIGTMIADAIDKVGPD---------GVLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLI 145 (475)
Q Consensus 83 ts~~------~~~~l~~li~~a~~~~~~~---------g~I~v~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~ 145 (475)
|+++ ++++|++++++|+.+++++ ++|+++ +|++++|| ++++|++|+++|.||+| +
T Consensus 157 tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~ 228 (545)
T 1a6d_A 157 TALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------P 228 (545)
T ss_dssp HHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------C
T ss_pred HHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------c
Confidence 9864 5799999999999999875 257765 99999999 99999999999999974 5
Q ss_pred ceecceeEEEeccc-------------cCCHHhh-----------HHHHHHHHhcCCCEEEEeccCChHHHHHHHHhccc
Q 011926 146 VEFENARVLVTDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLR 201 (475)
Q Consensus 146 ~~~~~~~Il~~~~~-------------i~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~ 201 (475)
++++||||+++|++ |++++++ .++++++.++|+||||++++|+++|+++|.+++
T Consensus 229 ~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~-- 306 (545)
T 1a6d_A 229 DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG-- 306 (545)
T ss_dssp SEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT--
T ss_pred ceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC--
Confidence 78999999999998 6667665 788999999999999999999999999999987
Q ss_pred ccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEEe---cceEEEEeCCCChHHHHHH
Q 011926 202 GILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEIQAR 278 (475)
Q Consensus 202 g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~ 278 (475)
++|| +++++++|+|||++|||++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 307 ----I~av-----~~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------ 366 (545)
T 1a6d_A 307 ----IYAV-----RRVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP------ 366 (545)
T ss_dssp ----CEEE-----CSCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCS------
T ss_pred ----eeEe-----ccCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC------
Confidence 4554 588999999999999999999 8999999999999999864 7899999998763
Q ss_pred HHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHhH
Q 011926 279 IAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSD 357 (475)
Q Consensus 279 i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls~ 357 (475)
+.|||+|||+|+++++|++|+++||++++|+++++| +|||||++|+++++
T Consensus 367 -----------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~ 417 (545)
T 1a6d_A 367 -----------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAM 417 (545)
T ss_dssp -----------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHH
T ss_pred -----------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHH
Confidence 589999999999999999999999999999999999 99999999999999
Q ss_pred hhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccCcccccHH
Q 011926 358 HVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAK 433 (475)
Q Consensus 358 ~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~ 433 (475)
+|++++.+.++. +|+++++|++||+.||++|++|||+|+.+++++|++. +.++|||+.+|++.||++.|||||+.
T Consensus 418 ~L~~~~~~~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 496 (545)
T 1a6d_A 418 RLAKYANSVGGR-EQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLR 496 (545)
T ss_dssp HHHHHHHTSCHH-HHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHH
T ss_pred HHHHHhhccCcc-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHH
Confidence 999998777776 5899999999999999999999999999999999962 46899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHchhHHhhcCCCC
Q 011926 434 VTRCALQNAASVAGMVLTTQAIVVEKPKP 462 (475)
Q Consensus 434 vk~~~l~~A~e~a~~lL~iD~iI~~~p~~ 462 (475)
||+++|+.|+|+|++|||+|++|..+|++
T Consensus 497 vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 497 VKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999998876
No 15
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=4e-84 Score=692.27 Aligned_cols=406 Identities=18% Similarity=0.290 Sum_probs=370.7
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHh-ccccCCC--HHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEK-RARPIEG--RDDIKAV 80 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~~~~i~~--~~~l~~v 80 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++ +++|++. .+.|.++
T Consensus 80 Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~v 159 (559)
T 3p9d_A 80 GKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINI 159 (559)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999 9999974 6789999
Q ss_pred HHHhccC------ChhHHhHHHHHHHHhCC-----CCc-----ccc--ccCCCccchheeecceEEeecccCCccccCcc
Q 011926 81 ATISAGN------DDLIGTMIADAIDKVGP-----DGV-----LSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPE 142 (475)
Q Consensus 81 a~ts~~~------~~~l~~li~~a~~~~~~-----~g~-----I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~ 142 (475)
|+||++. +++|++|+++|+.++++ +|. |++ .+|++++|| ++++|++|+++|.||+
T Consensus 160 A~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~------ 232 (559)
T 3p9d_A 160 AKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQA------ 232 (559)
T ss_dssp HHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTT------
T ss_pred HHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCC------
Confidence 9999864 79999999999999984 244 443 359999998 9999999999999996
Q ss_pred cccceec--ceeEEEecccc-------------CCHHh-----------hHHHHHHHHhcCCCEEEEeccCChHHHHHHH
Q 011926 143 KLIVEFE--NARVLVTDQKI-------------SAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLV 196 (475)
Q Consensus 143 ~~~~~~~--~~~Il~~~~~i-------------~~~~~-----------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~ 196 (475)
|+++++ ||||++++++| +++++ +.++++++.++|+||||++++|+++|+++|.
T Consensus 233 -m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~ 311 (559)
T 3p9d_A 233 -MPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFV 311 (559)
T ss_dssp -SCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHH
T ss_pred -cceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHH
Confidence 567888 99999999986 34444 5788999999999999999999999999999
Q ss_pred HhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccc-cCCCccccceeEEEE---EecceEEEEeCCCCh
Q 011926 197 VNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLI-ENTSVEQLGTARKVT---IRKDSTTIIADAASK 272 (475)
Q Consensus 197 ~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~-~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~ 272 (475)
+|++ ++ ++++++++|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|++|+||++
T Consensus 312 ~~~I------~a-----v~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~- 379 (559)
T 3p9d_A 312 EAKI------MG-----VRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK- 379 (559)
T ss_dssp HTTC------EE-----ESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-
T ss_pred HcCC------ce-----EccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC-
Confidence 9883 44 46889999999999999999996555544 889999999999998 57999999999876
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchh
Q 011926 273 DEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAA 351 (475)
Q Consensus 273 ~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~ 351 (475)
+++|||+|||+|+++++|++|+++||++++|+++++| +|||||++
T Consensus 380 ----------------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~ 425 (559)
T 3p9d_A 380 ----------------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCV 425 (559)
T ss_dssp ----------------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTH
T ss_pred ----------------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHH
Confidence 3589999999999999999999999999999999999 99999999
Q ss_pred HHHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CC------------ceeEec
Q 011926 352 LVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EW------------TTGYNA 415 (475)
Q Consensus 352 e~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~------------~~G~d~ 415 (475)
|++++++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. ++ ++|||+
T Consensus 426 e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~ 504 (559)
T 3p9d_A 426 EAALNIYLDNFATTVGSRE-QLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDL 504 (559)
T ss_dssp HHHHHHHHHHHHTTSCTTH-HHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECT
T ss_pred HHHHHHHHHHHhcccChHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEEC
Confidence 9999999999988888874 899999999999999999999999999999999873 33 799999
Q ss_pred CCCcccccccCcccccHHHHHHHHHHHHHHHHHHHchhHHhhcCCCCCC
Q 011926 416 MTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 464 (475)
Q Consensus 416 ~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~ 464 (475)
.+|++.||++.|||||+.||+++|++|+|+|++|||||++|+..|+++.
T Consensus 505 ~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~ 553 (559)
T 3p9d_A 505 IRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPK 553 (559)
T ss_dssp TSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCC
T ss_pred CCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCcccc
Confidence 9999999999999999999999999999999999999999999887653
No 16
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.2e-84 Score=695.18 Aligned_cols=403 Identities=18% Similarity=0.250 Sum_probs=366.3
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--C---HHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--G---RDDIK 78 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~---~~~l~ 78 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++++++++ | .+.|.
T Consensus 80 Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~ 159 (550)
T 3p9d_G 80 AKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLE 159 (550)
T ss_dssp HHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHH
T ss_pred HHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999986 3 67899
Q ss_pred HHHHHhcc------CChhHHhHHHHHHHHhCCC-------CccccccCCCccchheeecceEEeecccCCccccCccccc
Q 011926 79 AVATISAG------NDDLIGTMIADAIDKVGPD-------GVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLI 145 (475)
Q Consensus 79 ~va~ts~~------~~~~l~~li~~a~~~~~~~-------g~I~v~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~ 145 (475)
++|+||++ ++++|++++++|+.+++++ +.++ .+|++++|| ++++|++|+++|.||||+ +|+
T Consensus 160 ~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vik-v~Gg~~~ds-~lv~G~~~dk~~~s~yf~----~~~ 233 (550)
T 3p9d_G 160 RCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKK-IPGGAMEES-LFINGVAFKKTFSYAGFE----QQP 233 (550)
T ss_dssp HHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCB-CCSSCGGGC-CCCSSEEECCCSSCTTCS----CSC
T ss_pred HHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEE-ecCCCccce-eEEeeEEEeccccccccc----cCc
Confidence 99999874 4799999999999999843 3334 459999999 999999999999999996 466
Q ss_pred ceecceeEEEeccc-------------cCCHHhhH-----------HHHHHHHhcCCCEEEEeccCChHHHHHHHHhccc
Q 011926 146 VEFENARVLVTDQK-------------ISAIKDII-----------PLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLR 201 (475)
Q Consensus 146 ~~~~~~~Il~~~~~-------------i~~~~~l~-----------~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~ 201 (475)
++++||||+++|++ |++++++. ++++++.++|++|||++++|++.++++|.++++
T Consensus 234 ~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI- 312 (550)
T 3p9d_G 234 KKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNI- 312 (550)
T ss_dssp SCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTC-
T ss_pred ccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCC-
Confidence 77999999999998 45555554 478889999999999999999999999987663
Q ss_pred ccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE---ecceEEEEeCCCChHHHHHH
Q 011926 202 GILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQAR 278 (475)
Q Consensus 202 g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~~ 278 (475)
..++++++++|+|||++|||++++ ++++++++.||+|+.|++ +++++++|+||+++
T Consensus 313 ----------~~v~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~------ 371 (550)
T 3p9d_G 313 ----------FCAGRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA------ 371 (550)
T ss_dssp ----------EEEECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC------
T ss_pred ----------ccccCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC------
Confidence 235788999999999999999999 899999999999999985 68899999999763
Q ss_pred HHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHhH
Q 011926 279 IAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSD 357 (475)
Q Consensus 279 i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls~ 357 (475)
+.|||+|||+|+++++|++|+++||++++|+++++| +|||||++|+++|+
T Consensus 372 -----------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~ 422 (550)
T 3p9d_G 372 -----------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSK 422 (550)
T ss_dssp -----------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHH
T ss_pred -----------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence 489999999999999999999999999999999999 99999999999999
Q ss_pred hhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccCcccccHH
Q 011926 358 HVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAK 433 (475)
Q Consensus 358 ~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~ 433 (475)
+|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. ++++|||+.+|++.||++.|||||+.
T Consensus 423 ~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~ 501 (550)
T 3p9d_G 423 CLRDYSKTIAGKQ-QMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPAL 501 (550)
T ss_dssp HHHHHHHTCCSTT-HHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHH
T ss_pred HHHHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHH
Confidence 9999988888875 899999999999999999999999999999999873 56899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHchhHHhhcCCCCCC
Q 011926 434 VTRCALQNAASVAGMVLTTQAIVVEKPKPKT 464 (475)
Q Consensus 434 vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~ 464 (475)
||+++|++|+|+|++|||||++|..+|+++.
T Consensus 502 vk~~al~~A~~~a~~iL~id~ii~~~~~~~~ 532 (550)
T 3p9d_G 502 VKINALNSATEATNLILSVDETITNKGSESA 532 (550)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEECCCCCC--
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhhCCCcccc
Confidence 9999999999999999999999999887654
No 17
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-82 Score=672.54 Aligned_cols=396 Identities=21% Similarity=0.295 Sum_probs=362.4
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVA 81 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~~~~l~~va 81 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +++.|.++|
T Consensus 67 akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA 146 (518)
T 3iyg_D 67 ARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSA 146 (518)
T ss_pred HHHHHHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHh
Confidence 479999999999999999999999999999999999999999999999999999999999999999997 788999999
Q ss_pred HHhccCC------hhHHhHHHHHHHHhCC---CCc-----ccc--ccCCCccchheeecceEEeecccCCccccCccccc
Q 011926 82 TISAGND------DLIGTMIADAIDKVGP---DGV-----LSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLI 145 (475)
Q Consensus 82 ~ts~~~~------~~l~~li~~a~~~~~~---~g~-----I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~ 145 (475)
+||++.+ ++|++++++|+.++++ +|. |++ ..|++..|| ++++|++|+++|.| . ||
T Consensus 147 ~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp 217 (518)
T 3iyg_D 147 ATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GI 217 (518)
T ss_pred HhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CC
Confidence 9999754 8999999999999985 554 555 378999998 99999999999987 2 56
Q ss_pred ceecceeEEEeccccC-------------CHHh-----------hHHHHHHHHhcCCCEEEE-----eccCChHHHHHHH
Q 011926 146 VEFENARVLVTDQKIS-------------AIKD-----------IIPLLEKTTQLRAPLLII-----AEDVTGEALATLV 196 (475)
Q Consensus 146 ~~~~~~~Il~~~~~i~-------------~~~~-----------l~~~le~i~~~~~~lvi~-----~~~i~~~al~~l~ 196 (475)
..++||||++++++++ ++++ +.++++++.+.|+||||+ +++|+++++++|.
T Consensus 218 ~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~ 297 (518)
T 3iyg_D 218 TRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLN 297 (518)
T ss_pred ccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHH
Confidence 6789999999999854 3443 567899999999999999 8999999999999
Q ss_pred HhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE---ec-ceEEEEeCCCCh
Q 011926 197 VNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RK-DSTTIIADAASK 272 (475)
Q Consensus 197 ~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~-~~~~~~~~~~~~ 272 (475)
+++ |+||+.+ ++.+|+|||++|||++++ +++++++++||+|+.|++ ++ +++++|++|++.
T Consensus 298 ~~~------I~av~~~-----~~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~ 361 (518)
T 3iyg_D 298 KMK------IMVVKDI-----EREDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASP 361 (518)
T ss_pred HcC------cEEEecC-----CHHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCC
Confidence 886 6777654 568899999999999999 799999999999999985 45 688999998651
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchh
Q 011926 273 DEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAA 351 (475)
Q Consensus 273 ~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~ 351 (475)
++.|||+|||+|+++++|++|+++||++++|+++++| +|||||++
T Consensus 362 ----------------------------------~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~ 407 (518)
T 3iyg_D 362 ----------------------------------GKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAP 407 (518)
T ss_pred ----------------------------------CceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHH
Confidence 4689999999999999999999999999999999999 99999999
Q ss_pred HHHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhc----CCCceeEecCCCcccccccCc
Q 011926 352 LVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD----SEWTTGYNAMTDKYENMLQAG 427 (475)
Q Consensus 352 e~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~----~~~~~G~d~~~g~i~d~~~~g 427 (475)
|++++++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++.+|++ +++++|||+.+|++.||++.|
T Consensus 408 e~~~~~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~g 486 (518)
T 3iyg_D 408 EIELALRLTEYSRTLSGME-SYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEL 486 (518)
T ss_pred HHHHHHHHHHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhcc
Confidence 9999999999988788874 89999999999999999999999999999999988 466899999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHchhHHhhcC
Q 011926 428 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEK 459 (475)
Q Consensus 428 I~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~ 459 (475)
||||+.||+++|+.|+|+|++|||||+||+++
T Consensus 487 I~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 487 VVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred CEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 99999999999999999999999999999764
No 18
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1.7e-83 Score=683.76 Aligned_cols=400 Identities=16% Similarity=0.252 Sum_probs=366.2
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVA 81 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~~~~l~~va 81 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ |.+.|.++|
T Consensus 75 akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va 154 (528)
T 3p9d_D 75 ARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAA 154 (528)
T ss_dssp HHHHHHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999997 789999999
Q ss_pred HHhccC------ChhHHhHHHHHHHHhCC--CCccc-----c--ccCCCccchheeecceEEeecccCCccccCcccccc
Q 011926 82 TISAGN------DDLIGTMIADAIDKVGP--DGVLS-----I--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIV 146 (475)
Q Consensus 82 ~ts~~~------~~~l~~li~~a~~~~~~--~g~I~-----v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~ 146 (475)
+||++. +++|++++++|+.++++ +|.|. + .+|++++|| ++++|++|+++|.||+| |++
T Consensus 155 ~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~ 227 (528)
T 3p9d_D 155 STSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPT 227 (528)
T ss_dssp HHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCS
T ss_pred HHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------Ccc
Confidence 999863 68999999999999987 45433 3 359999999 99999999999999975 788
Q ss_pred eecceeEEEeccccC-------------CHHh-----------hHHHHHHHHhcCCCEEEEeccC-----ChHHHHHHHH
Q 011926 147 EFENARVLVTDQKIS-------------AIKD-----------IIPLLEKTTQLRAPLLIIAEDV-----TGEALATLVV 197 (475)
Q Consensus 147 ~~~~~~Il~~~~~i~-------------~~~~-----------l~~~le~i~~~~~~lvi~~~~i-----~~~al~~l~~ 197 (475)
+++||||++++++|+ ++++ +.++++++.+.|+||||++++| ++.++++|.+
T Consensus 228 ~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~ 307 (528)
T 3p9d_D 228 RKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSK 307 (528)
T ss_dssp EESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTT
T ss_pred cccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHH
Confidence 999999999999876 4443 5788999999999999999999 9999999998
Q ss_pred hcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE---ecceEEEEeCCCChHH
Q 011926 198 NKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDE 274 (475)
Q Consensus 198 ~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~ 274 (475)
++ ++|| +++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+...
T Consensus 308 ~~------I~av-----~~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~- 370 (528)
T 3p9d_D 308 LN------IMVV-----KDIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN- 370 (528)
T ss_dssp TS------CCEE-----ECCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-
T ss_pred cC------cEEE-----EeCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-
Confidence 77 4454 478899999999999999999 789999999999999984 577899999886310
Q ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHH
Q 011926 275 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALV 353 (475)
Q Consensus 275 i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~ 353 (475)
.++.|||+|||+|+++++|++|+++||++++|+++++| +|||||++|+
T Consensus 371 -------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~ 419 (528)
T 3p9d_D 371 -------------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEI 419 (528)
T ss_dssp -------------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHH
T ss_pred -------------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHH
Confidence 14689999999999999999999999999999999999 9999999999
Q ss_pred HHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccCccc
Q 011926 354 HLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVI 429 (475)
Q Consensus 354 ~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~ 429 (475)
+++++|++++.+.++. +|+++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||
T Consensus 420 ~~s~~L~~~~~~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~ 498 (528)
T 3p9d_D 420 EISRRLSKEARSMEGV-QAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHIL 498 (528)
T ss_dssp HHHHHHHHCCTTSCHH-HHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCE
T ss_pred HHHHHHHHHhhccChH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCe
Confidence 9999999998777776 4899999999999999999999999999999999883 4789999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHchhHHhhcC
Q 011926 430 DPAKVTRCALQNAASVAGMVLTTQAIVVEK 459 (475)
Q Consensus 430 Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~ 459 (475)
||+.||+++|+.|+|+|++|||||+||+++
T Consensus 499 dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 499 QPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred ecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 999999999999999999999999999764
No 19
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.8e-82 Score=672.00 Aligned_cols=396 Identities=20% Similarity=0.299 Sum_probs=361.5
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVA 81 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~--~~~~l~~va 81 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ |.+.|.++|
T Consensus 65 Akll~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va 144 (515)
T 3iyg_G 65 AKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNII 144 (515)
T ss_pred HHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999887 478999999
Q ss_pred HHhcc------CChhHHhHHHHHHHHhCCC--C--------cccc--ccCCCccchheeecceEEeecccCCccccCccc
Q 011926 82 TISAG------NDDLIGTMIADAIDKVGPD--G--------VLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEK 143 (475)
Q Consensus 82 ~ts~~------~~~~l~~li~~a~~~~~~~--g--------~I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~ 143 (475)
+||++ +.+.+++++++|+..+.++ + +|++ .+|+++.|| ++++|++|+++|.||.
T Consensus 145 ~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~------- 216 (515)
T 3iyg_G 145 NSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR------- 216 (515)
T ss_pred HHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------
Confidence 99985 3467789999999988632 2 1443 589999999 9999999999999984
Q ss_pred ccceecceeEEEeccc-------------cCCHHhhHHHHH-----------HHHhcCCCEEEEeccCChHHHHHHHHhc
Q 011926 144 LIVEFENARVLVTDQK-------------ISAIKDIIPLLE-----------KTTQLRAPLLIIAEDVTGEALATLVVNK 199 (475)
Q Consensus 144 ~~~~~~~~~Il~~~~~-------------i~~~~~l~~~le-----------~i~~~~~~lvi~~~~i~~~al~~l~~~~ 199 (475)
|+++++||||+++|++ |++++++.++++ ++.+.|++|||++++|++.++++|.+++
T Consensus 217 m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~ 296 (515)
T 3iyg_G 217 MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRAN 296 (515)
T ss_pred CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCC
Confidence 7889999999999994 567777766655 8999999999999999999999999866
Q ss_pred ccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccce-eEEEEE---ecceEEEEeCCCChHHH
Q 011926 200 LRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGT-ARKVTI---RKDSTTIIADAASKDEI 275 (475)
Q Consensus 200 ~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~-~~~v~i---~~~~~~~~~~~~~~~~i 275 (475)
++| ++++++++|+|||++|||++++ +++++++++||+ |+.|++ ++++++||+||+++
T Consensus 297 ------I~a-----v~~~~k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~--- 357 (515)
T 3iyg_G 297 ------ITA-----IRRVRKTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP--- 357 (515)
T ss_pred ------cee-----eccCCHHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC---
Confidence 333 5789999999999999999999 899999999999 999985 46789999999875
Q ss_pred HHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHH
Q 011926 276 QARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVH 354 (475)
Q Consensus 276 ~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ 354 (475)
..|||+|||+|+++++|.+|+++||++++|++++++ +|||||++|++
T Consensus 358 --------------------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~ 405 (515)
T 3iyg_G 358 --------------------------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMA 405 (515)
T ss_pred --------------------------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHH
Confidence 379999999999999999999999999999999877 99999999999
Q ss_pred HhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC-----CCceeEecCCCcccccccCccc
Q 011926 355 LSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS-----EWTTGYNAMTDKYENMLQAGVI 429 (475)
Q Consensus 355 ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~-----~~~~G~d~~~g~i~d~~~~gI~ 429 (475)
++++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. ++++|||+.+|++.||++.|||
T Consensus 406 ~~~~L~~~~~~~~g~e-q~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~ 484 (515)
T 3iyg_G 406 VAHALTEKSKAMTGVE-QWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIW 484 (515)
T ss_pred HHHHHHHHhhccCcHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCE
Confidence 9999999988888875 899999999999999999999999999999999873 4579999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHchhHHhhcC
Q 011926 430 DPAKVTRCALQNAASVAGMVLTTQAIVVEK 459 (475)
Q Consensus 430 Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~ 459 (475)
||+.||+++|++|+|+|++|||||++|...
T Consensus 485 dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 485 EPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred EcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 999999999999999999999999999754
No 20
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.4e-82 Score=671.32 Aligned_cols=395 Identities=20% Similarity=0.278 Sum_probs=361.2
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC----CHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE----GRDDIKA 79 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~----~~~~l~~ 79 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++ |++.|.+
T Consensus 66 Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~ 145 (515)
T 3iyg_E 66 AKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQ 145 (515)
T ss_pred HHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999998875 3688999
Q ss_pred HHHHhccC------ChhHHhHHHHHHHHhCCC-------Ccccc--ccCCCccchheeecceEEeecccCCccccCcccc
Q 011926 80 VATISAGN------DDLIGTMIADAIDKVGPD-------GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKL 144 (475)
Q Consensus 80 va~ts~~~------~~~l~~li~~a~~~~~~~-------g~I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~ 144 (475)
+|+||++. .+.|++++++|+..+.+. ++|++ .+|+++.|| ++++|++|+++|.||+|
T Consensus 146 vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m------- 217 (515)
T 3iyg_E 146 TAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQM------- 217 (515)
T ss_pred HHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccc-------
Confidence 99999863 578999999999988652 23554 579999999 99999999999999974
Q ss_pred cceecceeEEEecccc-------------CCHHhh-----------HHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcc
Q 011926 145 IVEFENARVLVTDQKI-------------SAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKL 200 (475)
Q Consensus 145 ~~~~~~~~Il~~~~~i-------------~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~ 200 (475)
++.++||+|+++++++ ++++++ .++++++.++|+||||++++|+++++++|.+|++
T Consensus 218 ~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I 297 (515)
T 3iyg_E 218 PKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL 297 (515)
T ss_pred cccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC
Confidence 5678899999999874 455554 5789999999999999999999999999999885
Q ss_pred cccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE-----ecceEEEEeCCCChHHH
Q 011926 201 RGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI-----RKDSTTIIADAASKDEI 275 (475)
Q Consensus 201 ~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i-----~~~~~~~~~~~~~~~~i 275 (475)
.+ ++++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|+||+++
T Consensus 298 ------~~-----v~~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~--- 358 (515)
T 3iyg_E 298 ------PA-----VRWVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS--- 358 (515)
T ss_pred ------EE-----EeccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC---
Confidence 23 4567799999999999999999 899999999999999986 34899999999875
Q ss_pred HHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHH
Q 011926 276 QARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVH 354 (475)
Q Consensus 276 ~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ 354 (475)
..|||+|||+|+++++|++|+++||++++|+++++| +|||||++|++
T Consensus 359 --------------------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~ 406 (515)
T 3iyg_E 359 --------------------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEIS 406 (515)
T ss_pred --------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHH
Confidence 379999999999999999999999999999999999 99999999999
Q ss_pred HhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhc-----CCCceeEecCCCcccccccCccc
Q 011926 355 LSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD-----SEWTTGYNAMTDKYENMLQAGVI 429 (475)
Q Consensus 355 ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~-----~~~~~G~d~~~g~i~d~~~~gI~ 429 (475)
++++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++.+|++ +++++|||+.+|++.||++.|||
T Consensus 407 ~~~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~ 485 (515)
T 3iyg_E 407 CALAVSQEADKCPTLE-QYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVI 485 (515)
T ss_pred HHHHHHHHhccCCcHH-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCE
Confidence 9999999988888875 89999999999999999999999999999999986 35689999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHchhHHhhc
Q 011926 430 DPAKVTRCALQNAASVAGMVLTTQAIVVE 458 (475)
Q Consensus 430 Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~ 458 (475)
||+.||+++|++|+|+|++|||||++|++
T Consensus 486 dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 486 ETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred EcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 99999999999999999999999999975
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=6.9e-83 Score=679.91 Aligned_cols=401 Identities=19% Similarity=0.302 Sum_probs=363.0
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhc-CCChhhHHHHHHHHHHHHHHHHHhccccCCC-----HHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTS-GANPVSLKRGIDKTVHGLVEELEKRARPIEG-----RDDI 77 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~~-----~~~l 77 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+ |+||+.|++||++|++.++++|+++++++++ ++.|
T Consensus 74 Akll~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l 153 (527)
T 3p9d_B 74 AKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDL 153 (527)
T ss_dssp HHHHHHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHH
Confidence 479999999999999999999999999999999999999 9999999999999999999999999999975 6889
Q ss_pred HHHHHHhccC------ChhHHhHHHHHHHHhCCCC---ccccc--cCCCccchheeecceEEeecccCCccccCcccccc
Q 011926 78 KAVATISAGN------DDLIGTMIADAIDKVGPDG---VLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIV 146 (475)
Q Consensus 78 ~~va~ts~~~------~~~l~~li~~a~~~~~~~g---~I~v~--~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~ 146 (475)
.++|+||++. +++|++++++|+.++++++ +|+++ .|+++.|| ++++|++|+++|.||+ |+
T Consensus 154 ~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~ 224 (527)
T 3p9d_B 154 IHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PK 224 (527)
T ss_dssp HHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CS
T ss_pred HHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------Ce
Confidence 9999999874 6899999999999999987 67764 69999999 9999999999999985 34
Q ss_pred eecceeEEEecccc--------------CCHHhh-----------HHHHHHHHhcCCCEEEEeccCChHHHHHHHHhccc
Q 011926 147 EFENARVLVTDQKI--------------SAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLR 201 (475)
Q Consensus 147 ~~~~~~Il~~~~~i--------------~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~ 201 (475)
+++||||++++++| ++++++ .+.++++.++|+||||++++|++.++++|.+++
T Consensus 225 ~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~-- 302 (527)
T 3p9d_B 225 RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG-- 302 (527)
T ss_dssp CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC--
T ss_pred eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC--
Confidence 67899999999874 334444 568899999999999999999999999999987
Q ss_pred ccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEE---EecceEEEEeCCCChHHHHHH
Q 011926 202 GILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT---IRKDSTTIIADAASKDEIQAR 278 (475)
Q Consensus 202 g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~ 278 (475)
+++ +++.++.+|+|||++|||++++ ++++++++.||+|+.|+ ++++++++|+||++
T Consensus 303 ----i~a-----v~~~~~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------- 361 (527)
T 3p9d_B 303 ----INS-----IEHADFEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA------- 361 (527)
T ss_dssp ----BCC-----CCCCHHHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC-------
T ss_pred ----CEE-----EecCCHHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCC-------
Confidence 344 4567789999999999999999 78999999999999998 57899999999976
Q ss_pred HHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHhH
Q 011926 279 IAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSD 357 (475)
Q Consensus 279 i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls~ 357 (475)
+++|||+|||+|+++++|++|+++||++++|+++++| +|||||++|+++++
T Consensus 362 ----------------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~ 413 (527)
T 3p9d_B 362 ----------------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSK 413 (527)
T ss_dssp ----------------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHH
T ss_pred ----------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHH
Confidence 3589999999999999999999999999999999999 99999999999999
Q ss_pred hhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccCcccccHH
Q 011926 358 HVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAK 433 (475)
Q Consensus 358 ~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~ 433 (475)
+|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. ++++|||+.+|++.||++.|||||+.
T Consensus 414 ~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~ 492 (527)
T 3p9d_B 414 AVDTEAQNIDGKK-SLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYK 492 (527)
T ss_dssp HHHHHHHHHCSHH-HHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETT
T ss_pred HHHHHHhccCcHH-HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHH
Confidence 9999987777874 899999999999999999999999999999999873 56899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHchhHHhhcCCCCCCC
Q 011926 434 VTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 465 (475)
Q Consensus 434 vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~~ 465 (475)
||+++|++|+|+|++|||+|++|..+|+++.+
T Consensus 493 vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 493 LKRAVVSSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 99999999999999999999999999876543
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.8e-81 Score=661.21 Aligned_cols=395 Identities=18% Similarity=0.283 Sum_probs=358.2
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhc----cccCCCHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKR----ARPIEGRDDIKA 79 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~----~~~i~~~~~l~~ 79 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++ +.+++|++.|.+
T Consensus 67 Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~ 146 (512)
T 3iyg_Q 67 AKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSS 146 (512)
T ss_pred HHHHHHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999998 556778999999
Q ss_pred HHHHhccC-----ChhHHhHHHHHHHHhCCC-Ccccc-------ccCCCccchheeecceEEeecccCCccccCcccccc
Q 011926 80 VATISAGN-----DDLIGTMIADAIDKVGPD-GVLSI-------ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIV 146 (475)
Q Consensus 80 va~ts~~~-----~~~l~~li~~a~~~~~~~-g~I~v-------~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~ 146 (475)
+|+||++. +++|++++++|+.+++++ +.|.+ ..|+++.|| ++++|++|+++|.+ |++
T Consensus 147 va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~ 216 (512)
T 3iyg_Q 147 LLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVT 216 (512)
T ss_pred HHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCc
Confidence 99999975 789999999999999886 44433 469999998 99999999999865 456
Q ss_pred eecceeEEEecccc-------------CCHHhhHHH-------H----HHHHhcCCCEEEEeccCChHHHHHHHHhcccc
Q 011926 147 EFENARVLVTDQKI-------------SAIKDIIPL-------L----EKTTQLRAPLLIIAEDVTGEALATLVVNKLRG 202 (475)
Q Consensus 147 ~~~~~~Il~~~~~i-------------~~~~~l~~~-------l----e~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g 202 (475)
+++||+|+++++++ ++++++.++ + +++.++|+||||++++|++.++++|.+++
T Consensus 217 ~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~--- 293 (512)
T 3iyg_Q 217 SVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYN--- 293 (512)
T ss_pred ccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC---
Confidence 78999999999874 456666554 4 48899999999999999999999998755
Q ss_pred cceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE---ecceEEEEeCCCChHHHHHHH
Q 011926 203 ILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQARI 279 (475)
Q Consensus 203 ~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~~i 279 (475)
|+||+. +++.+|+|||++|||++++ +++++++++||+|++|++ +++++++|++|+.
T Consensus 294 ---I~av~~-----~~~~dle~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~-------- 352 (512)
T 3iyg_Q 294 ---IMLVRL-----NSKWDLRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE-------- 352 (512)
T ss_pred ---eEEEEe-----CCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC--------
Confidence 677765 4578899999999999999 899999999999999986 4678999999853
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhHHHHhHh
Q 011926 280 AQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDH 358 (475)
Q Consensus 280 ~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e~~ls~~ 358 (475)
++++|||+|||+|+++++|++|+++||++++|+++++| +|||||++|+++|++
T Consensus 353 --------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~ 406 (512)
T 3iyg_Q 353 --------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQ 406 (512)
T ss_pred --------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHH
Confidence 25689999999999999999999999999999999999 999999999999999
Q ss_pred hhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhc----CCCceeEecCCC--cccccccCcccccH
Q 011926 359 VPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD----SEWTTGYNAMTD--KYENMLQAGVIDPA 432 (475)
Q Consensus 359 L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~----~~~~~G~d~~~g--~i~d~~~~gI~Dp~ 432 (475)
|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++ +++++|||+.+| ++.||++.|||||+
T Consensus 407 L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~ 485 (512)
T 3iyg_Q 407 ITSYGETCPGLE-QYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTY 485 (512)
T ss_pred HHHHhccCCcHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcH
Confidence 999988888875 89999999999999999999999999999999987 367899999965 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHchhHHhhcC
Q 011926 433 KVTRCALQNAASVAGMVLTTQAIVVEK 459 (475)
Q Consensus 433 ~vk~~~l~~A~e~a~~lL~iD~iI~~~ 459 (475)
.||+++|++|+|+|++|||+|++|+++
T Consensus 486 ~vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 486 LGKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred HHHHHHHHHHHHHHHHHHhHhHheecC
Confidence 999999999999999999999999764
No 23
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=6.7e-82 Score=675.47 Aligned_cols=404 Identities=20% Similarity=0.277 Sum_probs=362.6
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCCCH------HHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGR------DDI 77 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~~~------~~l 77 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++++++. +.|
T Consensus 101 Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L 180 (562)
T 3p9d_E 101 AKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFL 180 (562)
T ss_dssp HHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHH
T ss_pred HHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999988632 689
Q ss_pred HHHHHHhccC------ChhHHhHHHHHHHHhCCC-------Ccccc--ccCCCccchheeecceEEeecccCCccccCcc
Q 011926 78 KAVATISAGN------DDLIGTMIADAIDKVGPD-------GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPE 142 (475)
Q Consensus 78 ~~va~ts~~~------~~~l~~li~~a~~~~~~~-------g~I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~ 142 (475)
.++|+||++. .+.|++++++|+..+.+. ++|++ ..|++++|| ++++|++|+++|.||+|.++.+
T Consensus 181 ~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~ 259 (562)
T 3p9d_E 181 LRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL 259 (562)
T ss_dssp HHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC---
T ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc
Confidence 9999999863 578999999999988652 34554 579999999 9999999999999998754321
Q ss_pred cccceecceeEEEecccc-------------CCHHh-----------hHHHHHHHHhcCCCEEEEeccCChHHHHHHHHh
Q 011926 143 KLIVEFENARVLVTDQKI-------------SAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVN 198 (475)
Q Consensus 143 ~~~~~~~~~~Il~~~~~i-------------~~~~~-----------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~ 198 (475)
..+..+||+|+++++++ +++++ +.++++++.++|+||||++++|+++++++|.+|
T Consensus 260 -~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~ 338 (562)
T 3p9d_E 260 -PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQN 338 (562)
T ss_dssp ---TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTT
T ss_pred -cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHC
Confidence 11223899999999874 34444 568899999999999999999999999999998
Q ss_pred cccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE-----ecceEEEEeCCCChH
Q 011926 199 KLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI-----RKDSTTIIADAASKD 273 (475)
Q Consensus 199 ~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i-----~~~~~~~~~~~~~~~ 273 (475)
++ .+++++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|+||+++
T Consensus 339 ~I-----------~~v~~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~- 401 (562)
T 3p9d_E 339 DL-----------PAVRWVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET- 401 (562)
T ss_dssp TC-----------CCEECCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC-
T ss_pred CC-----------EEEeccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC-
Confidence 85 234567899999999999999999 899999999999999997 35899999999764
Q ss_pred HHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcchhH
Q 011926 274 EIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAAL 352 (475)
Q Consensus 274 ~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa~e 352 (475)
..|||+|||+|+++++|++|+++||++++|+++++| +|||||++|
T Consensus 402 ----------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e 447 (562)
T 3p9d_E 402 ----------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAE 447 (562)
T ss_dssp ----------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHH
T ss_pred ----------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHH
Confidence 479999999999999999999999999999999999 999999999
Q ss_pred HHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhc-----CCCceeEecCCCcccccccCc
Q 011926 353 VHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD-----SEWTTGYNAMTDKYENMLQAG 427 (475)
Q Consensus 353 ~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~-----~~~~~G~d~~~g~i~d~~~~g 427 (475)
++++++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++.+|++ +++++|||+.+|++.||++.|
T Consensus 448 ~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~g 526 (562)
T 3p9d_E 448 VTMSLAVSEEADKQRGID-QYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELF 526 (562)
T ss_dssp HHHHHHHHHHHHTTCTTH-HHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTT
T ss_pred HHHHHHHHHHhccCccHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhcc
Confidence 999999999988888875 89999999999999999999999999999999986 357899999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHchhHHhhcCCC
Q 011926 428 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 461 (475)
Q Consensus 428 I~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~ 461 (475)
||||+.||+++|++|+|+|++|||||++|+.++.
T Consensus 527 I~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 527 VVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred CEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999999988664
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.7e-81 Score=661.75 Aligned_cols=394 Identities=21% Similarity=0.304 Sum_probs=355.1
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC-CHHHHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE-GRDDIKAVAT 82 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~-~~~~l~~va~ 82 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++++++++ +.+.|.++|+
T Consensus 66 akll~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~ 145 (517)
T 3iyg_Z 66 ASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVAR 145 (517)
T ss_pred HHHHHHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999988 8889999999
Q ss_pred HhccC------ChhHHhHHHHHHHHhCCCC------ccc--cccCCCccchheeecceEEeecccCCccccCccccccee
Q 011926 83 ISAGN------DDLIGTMIADAIDKVGPDG------VLS--IESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEF 148 (475)
Q Consensus 83 ts~~~------~~~l~~li~~a~~~~~~~g------~I~--v~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~ 148 (475)
||++. .+.|++++++|+..+.+.+ +|+ ..+|++..|| ++++|++|+++|.||+ |++++
T Consensus 146 tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~i 217 (517)
T 3iyg_Z 146 TSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRV 217 (517)
T ss_pred HHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccc
Confidence 99863 5889999999998886532 233 3689999999 9999999999999986 77899
Q ss_pred cceeEEEeccccC-------------CHHhh-----------HHHHHHHHhcCCC---------EEEEeccCChHHHHHH
Q 011926 149 ENARVLVTDQKIS-------------AIKDI-----------IPLLEKTTQLRAP---------LLIIAEDVTGEALATL 195 (475)
Q Consensus 149 ~~~~Il~~~~~i~-------------~~~~l-----------~~~le~i~~~~~~---------lvi~~~~i~~~al~~l 195 (475)
+||+|+++|++|+ +++++ ...++++...+.+ |||++++|++.++++|
T Consensus 218 en~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L 297 (517)
T 3iyg_Z 218 EDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDAL 297 (517)
T ss_pred cCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHH
Confidence 9999999999863 34443 2456666665544 3677899999999999
Q ss_pred HHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccc-cceeEEE---EEecceEEEEeCCCC
Q 011926 196 VVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQ-LGTARKV---TIRKDSTTIIADAAS 271 (475)
Q Consensus 196 ~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~-lG~~~~v---~i~~~~~~~~~~~~~ 271 (475)
.+++ +++| +++++++|+|||++|||++++ +++++++++ ||+|+ | .+++++++||++|++
T Consensus 298 ~~~g------I~~v-----~~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~ 360 (517)
T 3iyg_Z 298 AKEG------IIAL-----RRAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNN 360 (517)
T ss_pred HHCC------CEEE-----EecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCC
Confidence 9876 3444 467899999999999999999 899999999 99999 9 468999999999987
Q ss_pred hHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcCCcch
Q 011926 272 KDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGA 350 (475)
Q Consensus 272 ~~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvpGGGa 350 (475)
++ .|||+|||+|+++++|.+|+++||++++|+++++| +|||||+
T Consensus 361 ~~-----------------------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa 405 (517)
T 3iyg_Z 361 PR-----------------------------------SVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGA 405 (517)
T ss_pred ch-----------------------------------hheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccH
Confidence 53 68999999999999999999999999999999999 9999999
Q ss_pred hHHHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC----CCceeEecCCCcccccccC
Q 011926 351 ALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQA 426 (475)
Q Consensus 351 ~e~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~----~~~~G~d~~~g~i~d~~~~ 426 (475)
+|+++|++|++++.+.++.+ |+++++|++||+.+|++||+|||+|+.+++++|++. ++++|||+.+|++.||++.
T Consensus 406 ~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~ 484 (517)
T 3iyg_Z 406 VEVAMAEALVKYKPSVKGRA-QLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEA 484 (517)
T ss_pred HHHHHHHHHHHHhccCCHHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhc
Confidence 99999999999988777874 899999999999999999999999999999999873 5689999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHchhHHhhc
Q 011926 427 GVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 458 (475)
Q Consensus 427 gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~ 458 (475)
|||||+.||+++|+.|+|+|++|||||++|.+
T Consensus 485 gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 485 GIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred cCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999975
No 25
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=2.6e-82 Score=679.40 Aligned_cols=404 Identities=17% Similarity=0.257 Sum_probs=350.7
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccC----CCHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPI----EGRDDIKA 79 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i----~~~~~l~~ 79 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++++ ++++.|.+
T Consensus 82 Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~ 161 (568)
T 3p9d_H 82 VKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLK 161 (568)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHH
T ss_pred HHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999876 57889999
Q ss_pred HHHHhcc-----CChhHHhHHHHHHHHhCCC-----C-------cccc--ccCCCccchheeecceEEeecccCCccccC
Q 011926 80 VATISAG-----NDDLIGTMIADAIDKVGPD-----G-------VLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTN 140 (475)
Q Consensus 80 va~ts~~-----~~~~l~~li~~a~~~~~~~-----g-------~I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~ 140 (475)
+|+||++ ++++|++|+++|+.+++++ + .|++ .+|+++.|| ++++|++|+++|.
T Consensus 162 va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~------- 233 (568)
T 3p9d_H 162 MIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE------- 233 (568)
T ss_dssp HHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS-------
T ss_pred HHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc-------
Confidence 9999974 3589999999999999874 3 4555 469999999 9999999999873
Q ss_pred cccccceec---ceeEEEeccc-------------cCCHHhhH-----------HHHHHHHhcCCCEEEEeccCChHHHH
Q 011926 141 PEKLIVEFE---NARVLVTDQK-------------ISAIKDII-----------PLLEKTTQLRAPLLIIAEDVTGEALA 193 (475)
Q Consensus 141 ~~~~~~~~~---~~~Il~~~~~-------------i~~~~~l~-----------~~le~i~~~~~~lvi~~~~i~~~al~ 193 (475)
+|+++++ ||||++++++ |++++++. ++++++.+.|+||||++++|++.+++
T Consensus 234 --~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~ 311 (568)
T 3p9d_H 234 --GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALH 311 (568)
T ss_dssp --SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHH
T ss_pred --CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHH
Confidence 3788898 9999999998 56677664 37889999999999999999999999
Q ss_pred HHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE---ecceEEEEeCCC
Q 011926 194 TLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAA 270 (475)
Q Consensus 194 ~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~ 270 (475)
+|.+++ |+||+ ++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+
T Consensus 312 ~L~~~g------I~av~-----~v~~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~ 375 (568)
T 3p9d_H 312 YLNRYG------ILVLK-----VPSKFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQ 375 (568)
T ss_dssp HHHHHT------CEEEC-----CCCHHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCS
T ss_pred HHHHCC------eEEEe-----cCCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCC
Confidence 999987 56665 45689999999999999999 799999999999999974 568999999986
Q ss_pred ChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHh--cC-CcCC
Q 011926 271 SKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIE--EG-IVPG 347 (475)
Q Consensus 271 ~~~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~--~g-vvpG 347 (475)
. |+++.|||+|||+|+++++|.+|+++||++++|++++ ++ +|||
T Consensus 376 ~---------------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpG 422 (568)
T 3p9d_H 376 G---------------------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPG 422 (568)
T ss_dssp S---------------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCT
T ss_pred C---------------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeC
Confidence 2 2246899999999999999999999999999999999 76 9999
Q ss_pred cchhHHHHhHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhcC------------CCceeEec
Q 011926 348 GGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS------------EWTTGYNA 415 (475)
Q Consensus 348 GGa~e~~ls~~L~~~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~~------------~~~~G~d~ 415 (475)
||++|++||++|++++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++. ++++|||+
T Consensus 423 GGa~E~~ls~~L~~~a~~~~g~e-q~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~ 501 (568)
T 3p9d_H 423 AGATEIELISRITKYGERTPGLL-QLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDI 501 (568)
T ss_dssp TTHHHHHHHHHHHHHHHTCCSTH-HHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCH
T ss_pred CcHHHHHHHHHHHHHhccCCcHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcc
Confidence 99999999999999988888875 899999999999999999999999999999999873 34789999
Q ss_pred CCCc---ccccccCcccccHHHHHHHHHHHHHHHHHHHchhHHhhcCCCCCCCCC
Q 011926 416 MTDK---YENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPVA 467 (475)
Q Consensus 416 ~~g~---i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~~~~~ 467 (475)
.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|+.+|+..|.+|
T Consensus 502 ~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~ 556 (568)
T 3p9d_H 502 DGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAP 556 (568)
T ss_dssp HHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC------------------
T ss_pred cCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCC
Confidence 9997 999999999999999999999999999999999999999998766554
No 26
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.7e-80 Score=663.51 Aligned_cols=400 Identities=20% Similarity=0.261 Sum_probs=356.3
Q ss_pred HHHHHHHHhhcccccCCccchHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhccccCC----CHHHHHH
Q 011926 4 IDCGMQVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE----GRDDIKA 79 (475)
Q Consensus 4 ~~~~~~~a~~qd~~vGDGTTt~vvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~i~----~~~~l~~ 79 (475)
-+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++++++++ +.+.|.+
T Consensus 73 akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~ 152 (546)
T 3p9d_F 73 AVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQ 152 (546)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999884 6789999
Q ss_pred HHHHhccC------ChhHHhHHHHHHHHhCCC-------Ccccc--ccCCCccchheeecceEEeecccCCccccCcccc
Q 011926 80 VATISAGN------DDLIGTMIADAIDKVGPD-------GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKL 144 (475)
Q Consensus 80 va~ts~~~------~~~l~~li~~a~~~~~~~-------g~I~v--~~g~~~~ds~~~i~G~~~~~~~~~p~~~~~~~~~ 144 (475)
+|+||++. .+.|++++++|+..+.+. .+|++ .+|++..|| ++++|++|+++|.||. |
T Consensus 153 vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m 224 (546)
T 3p9d_F 153 VARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------M 224 (546)
T ss_dssp HHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------S
T ss_pred HHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------C
Confidence 99999863 688999999999987531 12333 579999999 9999999999999984 7
Q ss_pred cceecceeEEEeccccCC-------------HHhh-----------HHHHHHHHhc---------CCC-EEEEeccCChH
Q 011926 145 IVEFENARVLVTDQKISA-------------IKDI-----------IPLLEKTTQL---------RAP-LLIIAEDVTGE 190 (475)
Q Consensus 145 ~~~~~~~~Il~~~~~i~~-------------~~~l-----------~~~le~i~~~---------~~~-lvi~~~~i~~~ 190 (475)
+++++||||+++||+|+. ++++ ...++++... |+| |||++++|++.
T Consensus 225 ~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~ 304 (546)
T 3p9d_F 225 PTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPM 304 (546)
T ss_dssp CSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHH
T ss_pred cceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHH
Confidence 889999999999998642 2222 2356666553 344 77888999999
Q ss_pred HHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEE---EecceEEEEe
Q 011926 191 ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT---IRKDSTTIIA 267 (475)
Q Consensus 191 al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~ 267 (475)
|+++|.+|++ ++| +++++++|+|||++|||++++ +++++++++||+|+.|+ +++++|+||+
T Consensus 305 Al~~L~~~gI------~~v-----r~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~ 368 (546)
T 3p9d_F 305 SLDVFAKHNI------LAL-----RRAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVT 368 (546)
T ss_dssp HHHHHTTTTC------EEE-----CCCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECS
T ss_pred HHHHHHHCCC------eeE-----ecCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEe
Confidence 9999999873 444 467899999999999999999 89999999999999994 6889999999
Q ss_pred CCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChhHHHHHHHHHHHHHHHHHHHHhcC-CcC
Q 011926 268 DAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVP 346 (475)
Q Consensus 268 ~~~~~~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~~l~E~~r~~~dal~~~~~~~~~g-vvp 346 (475)
||+++ ..|||+|||+|+++++|++|+++||++++|+++++| +||
T Consensus 369 g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVp 413 (546)
T 3p9d_F 369 ENTDP-----------------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIP 413 (546)
T ss_dssp SCSCC-----------------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred cCCCC-----------------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEe
Confidence 99875 379999999999999999999999999999999999 999
Q ss_pred CcchhHHHHhHhhhh---hhccCCchhHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHhhhc---------CCCceeEe
Q 011926 347 GGGAALVHLSDHVPA---IKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD---------SEWTTGYN 414 (475)
Q Consensus 347 GGGa~e~~ls~~L~~---~~~~~~~~~~~~~i~~~a~AL~~ip~~L~~NaG~d~~~~l~~l~~---------~~~~~G~d 414 (475)
|||++|+++|++|++ ++.+.++.+ |+++++|++||+.||++||+|||+|+.+++++|++ .++++|||
T Consensus 414 GGGa~e~~~s~~L~~~~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d 492 (546)
T 3p9d_F 414 GAGAFYIALSRYLRSANMNKLGAKGKT-KTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVD 492 (546)
T ss_dssp TTTHHHHHHHHHHHHHHTTTTTTTSHH-HHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCB
T ss_pred CCCHHHHHHHHHHHhhhhhhhcCchHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEe
Confidence 999999999999998 577778875 89999999999999999999999999999999986 34579999
Q ss_pred cCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHchhHHhhcCCCCC
Q 011926 415 AMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPK 463 (475)
Q Consensus 415 ~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~p~~~ 463 (475)
+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|+++|...
T Consensus 493 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~ 541 (546)
T 3p9d_F 493 LNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTL 541 (546)
T ss_dssp TTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSC
T ss_pred CCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 9999999999999999999999999999999999999999999887643
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.5e-43 Score=316.08 Aligned_cols=193 Identities=46% Similarity=0.758 Sum_probs=188.6
Q ss_pred heeecceEEeecccCCccccCcccccceecceeEEEeccccCCHHhhHHHHHHHHhcCCCEEEEeccCChHHHHHHHHhc
Q 011926 120 VEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNK 199 (475)
Q Consensus 120 ~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~~~~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~ 199 (475)
+++++||.|++||+||||++++++|..+++||+||++|.+|++.++++|.||++.+.++||+|++.+|+++||..|+-|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEEecceEEEEeCCCChHHHHHHH
Q 011926 200 LRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARI 279 (475)
Q Consensus 200 ~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~i 279 (475)
++|.++|+|||+|+||+.++..|+|||.+|||++++++.++++++++.++||+|+++.+++++|++++|.++++.+++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHhcCCeEEE
Q 011926 280 AQLKKELAETDSVYDSEKLAERIAKLSGGVAVI 312 (475)
Q Consensus 280 ~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI 312 (475)
++|+++++.+.|+|+|++|+||+++|+|+++.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998754
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=8.5e-42 Score=308.34 Aligned_cols=189 Identities=52% Similarity=0.859 Sum_probs=184.5
Q ss_pred eecceEEeecccCCccccCcccccceecceeEEEeccccCCHHhhHHHHHHHHhcCCCEEEEeccCChHHHHHHHHhccc
Q 011926 122 VEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLR 201 (475)
Q Consensus 122 ~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~~~~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~ 201 (475)
=.+|+.|++||+||||++++++|..+++||+||++|.+|+++++++|.||.+.+.++||+|++.+|+++||..|+-|+++
T Consensus 11 ~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklr 90 (201)
T 3osx_A 11 GSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMR 90 (201)
T ss_dssp -CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHH
T ss_pred CccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhcc
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEEecceEEEEeCCCChHHHHHHHHH
Q 011926 202 GILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQ 281 (475)
Q Consensus 202 g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~i~~ 281 (475)
|.++|+|||+|+||+.++..|+|||.+|||++++++.++++++++.++||+|+++.+++++|+++.|.++++++++|+++
T Consensus 91 g~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~q 170 (201)
T 3osx_A 91 GIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQ 170 (201)
T ss_dssp TSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccchhhHHHHHHHHHHhcCCeE
Q 011926 282 LKKELAETDSVYDSEKLAERIAKLSGGVA 310 (475)
Q Consensus 282 l~~~l~~~~~~~e~~~l~~r~~~l~~~~~ 310 (475)
|+++++.+.|+|+|++|+||+++|+|+++
T Consensus 171 Ir~qie~t~S~ydkEKLqERLAKLsGGVA 199 (201)
T 3osx_A 171 IRQQIEESTSDYDREKLQERVAKLAGGVK 199 (201)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999875
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.98 E-value=3.4e-32 Score=234.40 Aligned_cols=144 Identities=55% Similarity=0.902 Sum_probs=141.5
Q ss_pred ceEEeecccCCccccCcccccceecceeEEEeccccCCHHhhHHHHHHHHhcCCCEEEEeccCChHHHHHHHHhcccccc
Q 011926 125 GMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIL 204 (475)
Q Consensus 125 G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~~~~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~~ 204 (475)
|+.|++||+||||++++++|...++||+||++|.+|++.++++|.||++.+.|+||+|++++|+++||..|+-|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEEecceEEEEeC
Q 011926 205 NVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIAD 268 (475)
Q Consensus 205 ~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~ 268 (475)
+|+|||+|+||+.++..|+|||.+|||++++++.++++++++.++||+|+++.++++++++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999876
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.92 E-value=1.9e-25 Score=204.82 Aligned_cols=146 Identities=23% Similarity=0.298 Sum_probs=122.8
Q ss_pred ccchheeecceEEeecccCCccccCcccccceecceeEEEeccccCC-------------HHh-----------hHHHHH
Q 011926 116 FETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISA-------------IKD-----------IIPLLE 171 (475)
Q Consensus 116 ~~ds~~~i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~~~~~i~~-------------~~~-----------l~~~le 171 (475)
++|| ++++|++|++++.+| +||++++||||++++++|+. +++ +..+++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 3688 899999999999886 48889999999999998542 323 346788
Q ss_pred HHHhcCCCEEEEeccCChHHHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccc
Q 011926 172 KTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLG 251 (475)
Q Consensus 172 ~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG 251 (475)
++.++|+||||++++|++.|++||.++++ +| ++++++++|+|||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~gI------~~-----vr~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRANV------TA-----IRRVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTTC------EE-----ECCCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCCC------EE-----EecCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 89999999999999999999999999883 34 5688999999999999999999 89999999999
Q ss_pred e-eEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEecCCChh
Q 011926 252 T-ARKVT---IRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATET 320 (475)
Q Consensus 252 ~-~~~v~---i~~~~~~~~~~~~~~~~i~~~i~~l~~~l~~~~~~~e~~~l~~r~~~l~~~~~TI~lrG~t~~ 320 (475)
+ |+.|+ +++++++||+||+++ ..|||+|||+|.+
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 99998 468899999999765 4799999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.86 E-value=2.3e-21 Score=174.27 Aligned_cols=127 Identities=20% Similarity=0.278 Sum_probs=110.6
Q ss_pred ecceEEeecccCCccccCcccccceecceeEEEeccccC-------------CHHhh-----------HHHHHHHHhcCC
Q 011926 123 EEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKIS-------------AIKDI-----------IPLLEKTTQLRA 178 (475)
Q Consensus 123 i~G~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~~~~~i~-------------~~~~l-----------~~~le~i~~~~~ 178 (475)
++|++|++++.+| +||++++||||++++++|+ +++++ ..+++++.++|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 5799999999886 4889999999999999865 34443 457888999999
Q ss_pred CEEEEeccCChHHHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCeEeccccCccccCCCccccceeEEEEE
Q 011926 179 PLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI 258 (475)
Q Consensus 179 ~lvi~~~~i~~~al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i 258 (475)
||||++++|++.|++||.++++ +| ++++++++|+|||++|||++++ ++++++++.||+|+.|+.
T Consensus 74 nVVl~~k~I~d~a~~~l~k~gI------~~-----v~~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEGI------YA-----VRRVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTTC------EE-----ECSCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCCC------EE-----EccCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 9999999999999999999883 34 5688999999999999999999 899999999999999984
Q ss_pred ---ecceEEEEeCCCCh
Q 011926 259 ---RKDSTTIIADAASK 272 (475)
Q Consensus 259 ---~~~~~~~~~~~~~~ 272 (475)
+++++++|+||++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 68899999999863
No 32
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=33.58 E-value=1.6e+02 Score=25.24 Aligned_cols=85 Identities=12% Similarity=0.100 Sum_probs=56.4
Q ss_pred eecceeEEEeccc------c--------CCHHhhHHHHHH-HHhcCCCEEEEeccCChHHHHHHHHhcccccceEEEeeC
Q 011926 147 EFENARVLVTDQK------I--------SAIKDIIPLLEK-TTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKA 211 (475)
Q Consensus 147 ~~~~~~Il~~~~~------i--------~~~~~l~~~le~-i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~~~v~av~~ 211 (475)
++++.+|+++|+| . .+.+++...|.. ..+.|..+-+.+.+-..+.++.+.+.. +.+..+++.+
T Consensus 3 ~~~~m~IlvlNGPNLNlLG~REP~iYG~~Tl~di~~~l~~~a~~~g~~v~~~QSN~EGeLId~Ih~a~--~~~dgiIINp 80 (156)
T 1gtz_A 3 SLANAPIMILNGPNLNLLGQAQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEAR--LNHCGIVINP 80 (156)
T ss_dssp CTTTSCEEEEECTTGGGTTTSCHHHHCSCCHHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHHHHHHH--HHCSEEEEEC
T ss_pred CccCceEEEEeCCCccccCCCCCCcCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhh--hcCcEEEECc
Confidence 4567789999998 1 234566666655 445689999999999999999987653 2345566777
Q ss_pred CCcccchHHHHHHHHHHhC-CeEe
Q 011926 212 PGFGERRKALLQDIAIVTG-AEFQ 234 (475)
Q Consensus 212 ~~~~~~~~~~l~~la~~tG-~~ii 234 (475)
.++-..+-- +.|--...+ .+++
T Consensus 81 gA~THtSvA-lrDAl~~v~~~P~V 103 (156)
T 1gtz_A 81 AAYSHTSVA-ILDALNTCDGLPVV 103 (156)
T ss_dssp TTHHHHCHH-HHHHHHTSTTCCEE
T ss_pred hhhccccHH-HHHHHHhcCCCCEE
Confidence 666555443 334334445 5555
No 33
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=30.25 E-value=77 Score=28.82 Aligned_cols=57 Identities=5% Similarity=0.014 Sum_probs=35.8
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCC
Q 011926 170 LEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGA 231 (475)
Q Consensus 170 le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~ 231 (475)
+|++...+++|||......+.....|.+.+ +.++.+....+.++ .+.++.++.++|-
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~g----ipvv~~~~~~~~~~-~~~i~~lg~~~g~ 109 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLN----MKGYFYDFDSLKGM-QKSITQLGDQFNR 109 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHT----SCCEEECCSSHHHH-HHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcC----CcEEEecCCCHHHH-HHHHHHHHHHhCC
Confidence 678888999999987665555566665544 24444443223233 4567778887774
No 34
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=27.31 E-value=1.8e+02 Score=27.33 Aligned_cols=38 Identities=3% Similarity=0.184 Sum_probs=33.4
Q ss_pred CCHHhhHHHHHHHHhcCCCEEEEeccCChHHHHHHHHh
Q 011926 161 SAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVN 198 (475)
Q Consensus 161 ~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~~ 198 (475)
.+++++..+++.+++.++++||+...+++.....+++.
T Consensus 221 ps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~ 258 (291)
T 1pq4_A 221 PSAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAE 258 (291)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHH
Confidence 47889999999999999999999999999888888643
No 35
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=26.59 E-value=1.5e+02 Score=25.85 Aligned_cols=54 Identities=9% Similarity=0.078 Sum_probs=33.1
Q ss_pred cccceecc-eeEEEeccccCCHHhhHHHHHHHHhcCCCEEEEeccC-ChHHHHHHH
Q 011926 143 KLIVEFEN-ARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDV-TGEALATLV 196 (475)
Q Consensus 143 ~~~~~~~~-~~Il~~~~~i~~~~~l~~~le~i~~~~~~lvi~~~~i-~~~al~~l~ 196 (475)
..+..+.. .||+++.-.=.+.+.+...++.+...++++|++.+++ ++..+..|.
T Consensus 17 ~~~~~~~g~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~~~~~~l~ 72 (190)
T 1s3l_A 17 TENLYFQGHMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFVIKEFE 72 (190)
T ss_dssp ---------CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCSTHHHHHGG
T ss_pred ccChhhcCCeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCHHHHHHHH
Confidence 34556776 6888776433455666777777777789999999996 556666654
No 36
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=22.85 E-value=1.1e+02 Score=27.40 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=32.8
Q ss_pred HHHHHhcCCCEEEEec-cCChHHHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhC
Q 011926 170 LEKTTQLRAPLLIIAE-DVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTG 230 (475)
Q Consensus 170 le~i~~~~~~lvi~~~-~i~~~al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG 230 (475)
+|++...+++|||... ..++.....|.+.+ +.++.+....+.++ .+.++.++.++|
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~g----ipvv~~~~~~~~~~-~~~i~~lg~~lg 106 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLG----IKVMWVDATSIEQI-ANALRQLAPWSP 106 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHT----CCEEECCCCSHHHH-HHHHHHHGGGCS
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCC----CcEEEeCCCCHHHH-HHHHHHHHHHhC
Confidence 6888899999999753 45566667776544 24444432222222 344555555555
No 37
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=22.33 E-value=2.2e+02 Score=25.46 Aligned_cols=58 Identities=12% Similarity=0.174 Sum_probs=38.4
Q ss_pred HHHHHhcCCCEEEEeccCC-hHHHHHHHHhcccccceEEEeeC-CCcccchHHHHHHHHHHhCCe
Q 011926 170 LEKTTQLRAPLLIIAEDVT-GEALATLVVNKLRGILNVAAIKA-PGFGERRKALLQDIAIVTGAE 232 (475)
Q Consensus 170 le~i~~~~~~lvi~~~~i~-~~al~~l~~~~~~g~~~v~av~~-~~~~~~~~~~l~~la~~tG~~ 232 (475)
+|++.+.+++|||...... ......|.+.+ ..++.+.. ..+.++ .+.++.++.++|-.
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~g----ipvv~~~~~~~~~~~-~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSG----VNVVTVPGQTTPESV-AMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTT----CEEEEECCCCSHHHH-HHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcC----CcEEEeCCCCCHHHH-HHHHHHHHHHhCCH
Confidence 6888899999999877654 45666675543 35555542 233333 56788889988853
No 38
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.40 E-value=1.8e+02 Score=21.97 Aligned_cols=36 Identities=11% Similarity=0.302 Sum_probs=28.8
Q ss_pred CCHHhhHHHHHHHHhcCCCEEEEeccCChHHHHHHH
Q 011926 161 SAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLV 196 (475)
Q Consensus 161 ~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~ 196 (475)
.+.+++.+++...++.|.|+|++-.+.+..-...|.
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvnefq 70 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQ 70 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHH
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHHHHH
Confidence 567788999999999999999888787766555554
No 39
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=21.33 E-value=2.4e+02 Score=25.30 Aligned_cols=57 Identities=21% Similarity=0.170 Sum_probs=36.0
Q ss_pred HHHHHhcCCCEEEEecc-CChHHHHHHHHhcccccceEEEeeCC--CcccchHHHHHHHHHHhCC
Q 011926 170 LEKTTQLRAPLLIIAED-VTGEALATLVVNKLRGILNVAAIKAP--GFGERRKALLQDIAIVTGA 231 (475)
Q Consensus 170 le~i~~~~~~lvi~~~~-i~~~al~~l~~~~~~g~~~v~av~~~--~~~~~~~~~l~~la~~tG~ 231 (475)
+|++...+++|||.... .+......|.+.+ +.++.+..+ .+.++ .+.++.++.++|-
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~g----ipvv~~~~~~~~~~~~-~~~i~~lg~~~g~ 111 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQK----VNVVTLPRVPATLEQM-YANIRQLAKTLQV 111 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTT----CEEEEECCCSCCHHHH-HHHHHHHHHHTTC
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcC----CcEEEecCCCCCHHHH-HHHHHHHHHHhCC
Confidence 68888999999998765 3456667776544 345555322 22232 4567777887773
No 40
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=21.01 E-value=1.2e+02 Score=21.13 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=26.8
Q ss_pred HHhhhcCCChhhHHHHHHHH----HHHHHHHHHhcccc
Q 011926 37 LLSVTSGANPVSLKRGIDKT----VHGLVEELEKRARP 70 (475)
Q Consensus 37 ~~li~~gi~p~~I~~g~~~a----~~~~~~~L~~~~~~ 70 (475)
..|++.|+.+.....+++.. ++.++++|.+++.|
T Consensus 14 q~L~eMGFd~erae~Alk~Tg~~Gle~AmewL~k~~~~ 51 (54)
T 2cos_A 14 QELVNAGCDQEMAGRALKQTGSRSIEAALEYISKMSGP 51 (54)
T ss_dssp HHHHHHHCCHHHHHHHHHHHTSCCHHHHHHHHHHHSCS
T ss_pred HHHHHcCCCHHHHHHHHHHhCcccHHHHHHHHHHhcCC
Confidence 45788999998887777765 55788999988876
No 41
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=20.04 E-value=1.7e+02 Score=20.24 Aligned_cols=36 Identities=14% Similarity=-0.066 Sum_probs=26.4
Q ss_pred HHHHHhhhcCCChhhHHHHHHHHH---HHHHHHHHhccc
Q 011926 34 KLGLLSVTSGANPVSLKRGIDKTV---HGLVEELEKRAR 69 (475)
Q Consensus 34 ~~~~~li~~gi~p~~I~~g~~~a~---~~~~~~L~~~~~ 69 (475)
.+..+|...|++....+++++.+- +.+..+|.+...
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLlef~~ 51 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREFAF 51 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHhcC
Confidence 355778899999999999998875 345556665443
No 42
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.03 E-value=1.9e+02 Score=27.41 Aligned_cols=57 Identities=7% Similarity=0.056 Sum_probs=37.4
Q ss_pred HHHHHhcCCCEEEEeccCChHHHHHHHHhcccccceEEEeeCCCcccchHHHHHHHHHHhCCe
Q 011926 170 LEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAE 232 (475)
Q Consensus 170 le~i~~~~~~lvi~~~~i~~~al~~l~~~~~~g~~~v~av~~~~~~~~~~~~l~~la~~tG~~ 232 (475)
+|++...+++|||.... .......|.+.+ ..++.+....+.++ .+.++.|+.++|-.
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~g----ipvv~~~~~~~~~~-~~~i~~lg~~lg~e 165 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLG----IKAVVVNPEDQSLL-EECITLVGKITNNA 165 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTT----CCEEEECCCSHHHH-HHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcC----CCEEEEcCCCHHHH-HHHHHHHHHHcCCH
Confidence 68888999999998765 455566665543 45666653333333 46778888888853
Done!