Query 011931
Match_columns 474
No_of_seqs 420 out of 3724
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 18:14:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011931.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011931hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gwg_A 6-phosphogluconate dehy 100.0 1E-108 4E-113 859.1 42.9 461 6-473 3-478 (484)
2 2p4q_A 6-phosphogluconate dehy 100.0 1E-100 5E-105 805.2 44.2 460 6-473 9-491 (497)
3 2zyd_A 6-phosphogluconate dehy 100.0 4E-100 1E-104 799.4 44.7 453 6-467 14-480 (480)
4 2iz1_A 6-phosphogluconate dehy 100.0 3.2E-98 1E-102 786.0 45.7 453 7-468 5-473 (474)
5 2pgd_A 6-phosphogluconate dehy 100.0 1.9E-97 6E-102 781.7 43.9 458 8-473 3-476 (482)
6 1pgj_A 6PGDH, 6-PGDH, 6-phosph 100.0 1.3E-94 4.3E-99 758.6 44.3 450 8-467 2-476 (478)
7 4e21_A 6-phosphogluconate dehy 100.0 1.3E-52 4.4E-57 423.8 28.9 320 8-453 23-357 (358)
8 3obb_A Probable 3-hydroxyisobu 100.0 1.9E-46 6.4E-51 370.3 24.7 256 6-288 2-267 (300)
9 4gbj_A 6-phosphogluconate dehy 100.0 1.3E-44 4.5E-49 357.1 20.2 256 5-288 3-262 (297)
10 3doj_A AT3G25530, dehydrogenas 100.0 5.6E-38 1.9E-42 312.0 24.5 258 4-289 18-279 (310)
11 4dll_A 2-hydroxy-3-oxopropiona 100.0 7.3E-38 2.5E-42 312.5 24.0 254 6-288 30-286 (320)
12 3pdu_A 3-hydroxyisobutyrate de 100.0 1.2E-37 4E-42 306.4 22.4 255 7-289 1-259 (287)
13 3pef_A 6-phosphogluconate dehy 100.0 2.3E-37 8E-42 304.2 23.9 254 8-289 2-259 (287)
14 3g0o_A 3-hydroxyisobutyrate de 100.0 2.9E-37 9.9E-42 305.9 23.3 257 4-288 4-266 (303)
15 3qha_A Putative oxidoreductase 100.0 4.3E-37 1.5E-41 303.7 22.8 251 7-289 15-277 (296)
16 2h78_A Hibadh, 3-hydroxyisobut 100.0 1.2E-35 3.9E-40 294.1 25.5 255 6-288 2-267 (302)
17 3l6d_A Putative oxidoreductase 100.0 6.6E-35 2.3E-39 289.3 24.2 250 6-288 8-266 (306)
18 3qsg_A NAD-binding phosphogluc 100.0 5.8E-33 2E-37 276.0 21.0 246 6-288 23-275 (312)
19 1vpd_A Tartronate semialdehyde 100.0 4.7E-32 1.6E-36 267.6 22.9 257 5-289 3-263 (299)
20 4ezb_A Uncharacterized conserv 100.0 2.2E-32 7.5E-37 272.4 18.7 244 6-289 23-278 (317)
21 3cky_A 2-hydroxymethyl glutara 100.0 4.3E-31 1.5E-35 261.0 24.6 255 7-289 4-263 (301)
22 2gf2_A Hibadh, 3-hydroxyisobut 100.0 1.4E-30 4.9E-35 256.6 23.0 256 8-290 1-266 (296)
23 1yb4_A Tartronic semialdehyde 100.0 4.6E-31 1.6E-35 259.9 19.4 255 6-289 2-260 (295)
24 2cvz_A Dehydrogenase, 3-hydrox 100.0 1.1E-30 3.7E-35 256.4 19.4 251 7-288 1-253 (289)
25 2uyy_A N-PAC protein; long-cha 100.0 1.3E-29 4.4E-34 252.3 23.7 255 7-289 30-288 (316)
26 4a7p_A UDP-glucose dehydrogena 100.0 1.4E-28 4.9E-33 254.3 20.8 252 8-289 9-295 (446)
27 3gg2_A Sugar dehydrogenase, UD 100.0 1.2E-27 4.2E-32 248.4 22.0 253 7-289 2-291 (450)
28 3g79_A NDP-N-acetyl-D-galactos 99.9 4.2E-27 1.4E-31 244.7 18.4 250 6-288 17-322 (478)
29 3pid_A UDP-glucose 6-dehydroge 99.9 1.2E-26 4E-31 237.9 20.8 208 6-227 35-269 (432)
30 1i36_A Conserved hypothetical 99.9 3.6E-26 1.2E-30 221.5 16.6 238 8-290 1-241 (264)
31 3ojo_A CAP5O; rossmann fold, c 99.9 4.7E-25 1.6E-29 226.5 21.0 202 8-226 12-250 (431)
32 2q3e_A UDP-glucose 6-dehydroge 99.9 3.6E-25 1.2E-29 231.6 20.5 248 7-284 5-295 (467)
33 2y0c_A BCEC, UDP-glucose dehyd 99.9 4.5E-25 1.6E-29 230.8 21.2 251 7-290 8-302 (478)
34 2o3j_A UDP-glucose 6-dehydroge 99.9 4.1E-25 1.4E-29 231.6 19.4 251 6-288 8-307 (481)
35 1mv8_A GMD, GDP-mannose 6-dehy 99.9 1.4E-24 4.7E-29 225.4 20.1 248 8-288 1-290 (436)
36 1dlj_A UDP-glucose dehydrogena 99.9 1.5E-22 5.2E-27 207.7 23.2 248 8-290 1-282 (402)
37 3k96_A Glycerol-3-phosphate de 99.9 1.9E-23 6.5E-28 210.7 16.0 267 7-290 29-330 (356)
38 3dtt_A NADP oxidoreductase; st 99.9 7.8E-24 2.7E-28 203.0 11.4 179 6-201 18-232 (245)
39 2ew2_A 2-dehydropantoate 2-red 99.9 5.6E-22 1.9E-26 196.3 14.5 259 6-289 2-300 (316)
40 3vtf_A UDP-glucose 6-dehydroge 99.9 4.3E-21 1.5E-25 196.8 21.1 254 4-290 18-308 (444)
41 2dpo_A L-gulonate 3-dehydrogen 99.8 1.6E-20 5.3E-25 186.4 17.8 195 5-227 4-225 (319)
42 2ahr_A Putative pyrroline carb 99.8 3.8E-20 1.3E-24 178.5 19.2 232 6-270 2-241 (259)
43 1zej_A HBD-9, 3-hydroxyacyl-CO 99.8 1E-20 3.4E-25 185.2 15.2 186 7-226 12-204 (293)
44 3d1l_A Putative NADP oxidoredu 99.8 1.2E-20 4.1E-25 182.8 13.7 198 6-227 9-211 (266)
45 3c24_A Putative oxidoreductase 99.8 1.8E-20 6.2E-25 183.6 15.1 198 6-227 10-229 (286)
46 2qyt_A 2-dehydropantoate 2-red 99.8 1.6E-20 5.6E-25 186.1 12.9 252 6-290 7-306 (317)
47 1ks9_A KPA reductase;, 2-dehyd 99.8 3.1E-21 1.1E-25 188.8 5.3 250 8-289 1-279 (291)
48 1z82_A Glycerol-3-phosphate de 99.8 7.3E-21 2.5E-25 190.6 8.1 199 6-224 13-238 (335)
49 1evy_A Glycerol-3-phosphate de 99.8 1.5E-20 5.2E-25 190.6 9.6 201 9-223 17-256 (366)
50 2izz_A Pyrroline-5-carboxylate 99.8 1.1E-18 3.7E-23 173.9 21.6 195 7-227 22-229 (322)
51 1yqg_A Pyrroline-5-carboxylate 99.8 2.3E-19 7.7E-24 173.3 15.6 227 8-288 1-245 (263)
52 1txg_A Glycerol-3-phosphate de 99.8 5.3E-19 1.8E-23 176.7 16.4 202 8-223 1-243 (335)
53 3gt0_A Pyrroline-5-carboxylate 99.8 6.4E-18 2.2E-22 161.9 21.7 195 7-227 2-205 (247)
54 3ggo_A Prephenate dehydrogenas 99.8 4.7E-18 1.6E-22 168.5 21.0 172 6-196 32-219 (314)
55 1yj8_A Glycerol-3-phosphate de 99.8 6.4E-19 2.2E-23 179.2 13.3 204 6-223 20-274 (375)
56 2g5c_A Prephenate dehydrogenas 99.8 1.7E-17 5.9E-22 161.8 19.9 178 7-203 1-194 (281)
57 1x0v_A GPD-C, GPDH-C, glycerol 99.8 4.2E-18 1.4E-22 171.6 14.6 202 7-223 8-258 (354)
58 4e12_A Diketoreductase; oxidor 99.8 2.9E-17 9.9E-22 160.6 19.7 197 7-227 4-223 (283)
59 3tri_A Pyrroline-5-carboxylate 99.8 6.8E-17 2.3E-21 157.7 21.5 194 7-227 3-207 (280)
60 3ktd_A Prephenate dehydrogenas 99.7 1.5E-17 5E-22 166.2 15.5 177 1-195 2-200 (341)
61 3k6j_A Protein F01G10.3, confi 99.7 6.5E-17 2.2E-21 166.9 19.2 193 6-228 53-268 (460)
62 2rcy_A Pyrroline carboxylate r 99.7 6.4E-17 2.2E-21 156.0 17.7 186 5-227 2-199 (262)
63 1jay_A Coenzyme F420H2:NADP+ o 99.7 5.6E-17 1.9E-21 151.3 15.7 179 8-201 1-200 (212)
64 3mog_A Probable 3-hydroxybutyr 99.7 6.1E-17 2.1E-21 169.1 17.6 189 7-227 5-221 (483)
65 1f0y_A HCDH, L-3-hydroxyacyl-C 99.7 2.3E-16 7.8E-21 155.6 20.4 193 6-227 14-237 (302)
66 2f1k_A Prephenate dehydrogenas 99.7 2.3E-16 7.9E-21 153.5 18.3 192 8-225 1-207 (279)
67 1bg6_A N-(1-D-carboxylethyl)-L 99.7 4.7E-17 1.6E-21 163.9 13.6 268 7-291 4-322 (359)
68 3b1f_A Putative prephenate deh 99.7 1.3E-16 4.5E-21 156.2 15.5 155 6-169 5-175 (290)
69 3hwr_A 2-dehydropantoate 2-red 99.7 1.2E-15 4.2E-20 151.5 19.4 247 7-289 19-302 (318)
70 3ghy_A Ketopantoate reductase 99.7 2.7E-16 9.3E-21 157.4 14.3 253 7-290 3-312 (335)
71 4huj_A Uncharacterized protein 99.7 6.2E-17 2.1E-21 152.3 9.0 161 6-188 22-204 (220)
72 2i76_A Hypothetical protein; N 99.7 5.7E-17 1.9E-21 157.9 8.0 183 7-220 2-190 (276)
73 2yjz_A Metalloreductase steap4 99.5 5.5E-18 1.9E-22 157.2 0.0 162 7-192 19-192 (201)
74 3hn2_A 2-dehydropantoate 2-red 99.7 6.5E-15 2.2E-19 145.9 21.4 257 7-294 2-298 (312)
75 2pv7_A T-protein [includes: ch 99.7 2.2E-15 7.4E-20 148.3 17.3 180 6-224 20-203 (298)
76 3i83_A 2-dehydropantoate 2-red 99.6 2.5E-15 8.6E-20 149.4 17.1 250 7-289 2-292 (320)
77 1wdk_A Fatty oxidation complex 99.6 1.9E-15 6.7E-20 165.1 16.4 190 6-226 313-528 (715)
78 2wtb_A MFP2, fatty acid multif 99.6 2.4E-15 8.1E-20 164.6 16.7 191 6-227 311-527 (725)
79 1zcj_A Peroxisomal bifunctiona 99.6 6.1E-15 2.1E-19 153.7 18.4 191 6-227 36-250 (463)
80 3ado_A Lambda-crystallin; L-gu 99.6 5.8E-15 2E-19 145.6 16.6 194 7-227 6-225 (319)
81 2raf_A Putative dinucleotide-b 99.6 9.1E-16 3.1E-20 143.2 9.1 152 6-196 18-190 (209)
82 2vns_A Metalloreductase steap3 99.6 5.6E-16 1.9E-20 145.3 7.5 166 6-192 27-204 (215)
83 3g17_A Similar to 2-dehydropan 99.5 3.2E-15 1.1E-19 146.8 5.3 246 7-290 2-275 (294)
84 3dfu_A Uncharacterized protein 99.5 7.6E-14 2.6E-18 131.2 14.2 156 6-213 5-162 (232)
85 4gwg_A 6-phosphogluconate dehy 99.5 3.7E-14 1.3E-18 147.6 8.7 117 310-434 177-298 (484)
86 1np3_A Ketol-acid reductoisome 99.5 2.3E-13 7.9E-18 136.1 14.0 193 7-222 16-223 (338)
87 4fgw_A Glycerol-3-phosphate de 99.5 3.4E-14 1.2E-18 143.5 6.3 272 9-291 36-366 (391)
88 3ego_A Probable 2-dehydropanto 99.5 1E-13 3.4E-18 137.0 9.4 251 7-298 2-292 (307)
89 2i99_A MU-crystallin homolog; 99.4 8.5E-15 2.9E-19 145.0 -4.0 137 5-154 133-280 (312)
90 3c7a_A Octopine dehydrogenase; 99.3 3.8E-11 1.3E-15 122.9 18.6 99 7-109 2-117 (404)
91 3zwc_A Peroxisomal bifunctiona 99.3 1.5E-11 5E-16 134.2 16.2 192 7-228 316-530 (742)
92 3gvx_A Glycerate dehydrogenase 99.3 1.9E-12 6.4E-17 126.2 8.0 117 8-139 123-240 (290)
93 2gcg_A Glyoxylate reductase/hy 99.3 7.3E-12 2.5E-16 124.8 12.1 112 7-129 155-267 (330)
94 3jtm_A Formate dehydrogenase, 99.3 1E-11 3.5E-16 124.2 11.8 122 7-138 164-286 (351)
95 2dbq_A Glyoxylate reductase; D 99.3 1.5E-11 5.3E-16 122.6 13.0 119 7-137 150-269 (334)
96 2w2k_A D-mandelate dehydrogena 99.3 1.5E-11 5E-16 123.4 12.5 122 7-138 163-286 (348)
97 3gg9_A D-3-phosphoglycerate de 99.3 1.8E-11 6.2E-16 122.5 12.8 120 7-137 160-280 (352)
98 3evt_A Phosphoglycerate dehydr 99.3 7E-12 2.4E-16 124.2 7.9 120 8-139 138-258 (324)
99 3ba1_A HPPR, hydroxyphenylpyru 99.2 2.6E-11 8.9E-16 120.6 12.0 114 7-135 164-278 (333)
100 4g2n_A D-isomer specific 2-hyd 99.2 4.8E-11 1.7E-15 119.0 12.5 120 8-139 174-294 (345)
101 4dgs_A Dehydrogenase; structur 99.2 2.2E-11 7.4E-16 121.3 9.9 117 7-138 171-288 (340)
102 1wwk_A Phosphoglycerate dehydr 99.2 8.2E-11 2.8E-15 115.9 13.7 109 8-128 143-252 (307)
103 3fr7_A Putative ketol-acid red 99.2 6.1E-11 2.1E-15 121.2 12.9 148 8-169 55-230 (525)
104 1mx3_A CTBP1, C-terminal bindi 99.2 2.5E-11 8.4E-16 121.4 9.8 113 7-130 168-281 (347)
105 4e5n_A Thermostable phosphite 99.2 1.9E-11 6.6E-16 121.5 8.2 121 7-138 145-266 (330)
106 1gdh_A D-glycerate dehydrogena 99.2 3.9E-11 1.3E-15 118.9 10.3 111 7-128 146-258 (320)
107 2nac_A NAD-dependent formate d 99.2 6.9E-11 2.4E-15 119.7 12.1 120 7-136 191-311 (393)
108 2d0i_A Dehydrogenase; structur 99.2 3.5E-11 1.2E-15 119.9 9.8 118 7-137 146-264 (333)
109 3hg7_A D-isomer specific 2-hyd 99.2 6.6E-12 2.2E-16 124.2 4.4 119 8-138 141-260 (324)
110 2yq5_A D-isomer specific 2-hyd 99.2 4.4E-11 1.5E-15 119.2 10.0 117 8-138 149-266 (343)
111 2dc1_A L-aspartate dehydrogena 99.2 2.5E-12 8.7E-17 122.0 1.0 159 8-197 1-165 (236)
112 2ekl_A D-3-phosphoglycerate de 99.2 3.7E-11 1.3E-15 118.7 9.2 119 7-137 142-261 (313)
113 4hy3_A Phosphoglycerate oxidor 99.2 1.6E-10 5.5E-15 115.9 13.6 117 8-137 177-294 (365)
114 2pi1_A D-lactate dehydrogenase 99.2 4.4E-11 1.5E-15 119.0 9.4 119 8-139 142-261 (334)
115 2g76_A 3-PGDH, D-3-phosphoglyc 99.2 6.7E-11 2.3E-15 117.7 10.6 109 8-128 166-275 (335)
116 1ygy_A PGDH, D-3-phosphoglycer 99.2 1.1E-10 3.8E-15 123.4 12.9 151 7-169 142-307 (529)
117 3pp8_A Glyoxylate/hydroxypyruv 99.2 9.9E-12 3.4E-16 122.7 4.4 120 7-138 139-259 (315)
118 2j6i_A Formate dehydrogenase; 99.2 5.7E-11 2E-15 119.6 9.2 119 7-135 164-284 (364)
119 1qp8_A Formate dehydrogenase; 99.1 5.7E-11 2E-15 116.7 7.3 113 7-135 124-237 (303)
120 3oet_A Erythronate-4-phosphate 99.1 9.7E-11 3.3E-15 117.8 7.9 117 8-139 120-241 (381)
121 1j4a_A D-LDH, D-lactate dehydr 99.1 2.3E-10 7.8E-15 114.0 10.4 117 8-137 147-264 (333)
122 2cuk_A Glycerate dehydrogenase 99.1 2.1E-10 7.3E-15 113.1 10.0 104 7-128 144-248 (311)
123 3k5p_A D-3-phosphoglycerate de 99.1 1E-10 3.6E-15 118.9 7.9 117 8-138 157-274 (416)
124 1sc6_A PGDH, D-3-phosphoglycer 99.1 1.9E-10 6.4E-15 117.3 7.6 106 8-127 146-252 (404)
125 2o4c_A Erythronate-4-phosphate 99.0 3.4E-10 1.2E-14 114.1 8.3 116 7-137 116-236 (380)
126 1dxy_A D-2-hydroxyisocaproate 99.0 3.7E-10 1.3E-14 112.4 7.3 116 8-137 146-262 (333)
127 1xdw_A NAD+-dependent (R)-2-hy 99.0 3.6E-10 1.2E-14 112.4 6.8 117 8-138 147-264 (331)
128 1y81_A Conserved hypothetical 99.0 7.4E-10 2.5E-14 96.0 7.1 105 7-132 14-122 (138)
129 2d5c_A AROE, shikimate 5-dehyd 99.0 1.3E-09 4.5E-14 104.8 9.2 108 9-131 118-227 (263)
130 1lss_A TRK system potassium up 99.0 1E-08 3.4E-13 88.0 13.5 118 6-133 3-122 (140)
131 2rir_A Dipicolinate synthase, 98.9 1.7E-09 5.7E-14 106.2 8.5 139 7-168 157-296 (300)
132 2hk9_A Shikimate dehydrogenase 98.9 9.3E-10 3.2E-14 106.7 6.4 110 7-131 129-240 (275)
133 2duw_A Putative COA-binding pr 98.9 1.7E-09 5.7E-14 94.6 5.9 103 8-131 14-122 (145)
134 3oj0_A Glutr, glutamyl-tRNA re 98.8 3.8E-09 1.3E-13 91.9 5.4 92 7-110 21-112 (144)
135 1hyh_A L-hicdh, L-2-hydroxyiso 98.8 2.7E-08 9.4E-13 97.9 11.9 99 7-110 1-124 (309)
136 3d4o_A Dipicolinate synthase s 98.8 2.3E-08 7.9E-13 97.7 10.7 112 7-133 155-266 (293)
137 1x7d_A Ornithine cyclodeaminas 98.7 6.9E-09 2.3E-13 103.9 5.5 122 5-133 127-250 (350)
138 3c85_A Putative glutathione-re 98.7 9.8E-08 3.3E-12 86.3 12.7 117 7-133 39-159 (183)
139 4hkt_A Inositol 2-dehydrogenas 98.7 9E-08 3.1E-12 95.0 13.4 113 6-130 2-118 (331)
140 3ic5_A Putative saccharopine d 98.7 1.2E-07 4.1E-12 78.6 11.3 108 5-120 3-111 (118)
141 3llv_A Exopolyphosphatase-rela 98.7 1.5E-07 5.2E-12 81.1 12.4 117 6-133 5-123 (141)
142 3uuw_A Putative oxidoreductase 98.7 1.1E-07 3.8E-12 93.4 12.9 112 6-130 5-121 (308)
143 3fwz_A Inner membrane protein 98.7 1.4E-07 4.7E-12 81.6 11.8 117 7-133 7-125 (140)
144 3q2i_A Dehydrogenase; rossmann 98.7 1.4E-07 4.9E-12 94.5 13.3 114 6-130 12-130 (354)
145 3e9m_A Oxidoreductase, GFO/IDH 98.6 1.8E-07 6E-12 92.9 12.9 115 6-131 4-123 (330)
146 3euw_A MYO-inositol dehydrogen 98.6 1.3E-07 4.5E-12 94.3 12.1 113 7-130 4-120 (344)
147 2ewd_A Lactate dehydrogenase,; 98.6 8.1E-08 2.8E-12 94.9 10.2 100 7-111 4-124 (317)
148 3ezy_A Dehydrogenase; structur 98.6 1.7E-07 5.8E-12 93.5 12.6 114 7-130 2-119 (344)
149 3kb6_A D-lactate dehydrogenase 98.6 6.2E-08 2.1E-12 96.3 9.2 118 8-138 142-260 (334)
150 1a5z_A L-lactate dehydrogenase 98.6 1.4E-07 4.8E-12 93.3 11.6 98 8-111 1-119 (319)
151 3db2_A Putative NADPH-dependen 98.6 2.2E-07 7.4E-12 93.1 13.1 113 7-130 5-121 (354)
152 1pzg_A LDH, lactate dehydrogen 98.6 2.4E-07 8.3E-12 92.0 13.2 104 4-111 6-135 (331)
153 2hjr_A Malate dehydrogenase; m 98.6 2.5E-07 8.4E-12 91.8 12.7 100 6-110 13-133 (328)
154 2egg_A AROE, shikimate 5-dehyd 98.6 8.5E-08 2.9E-12 93.8 9.2 117 7-131 141-261 (297)
155 2z2v_A Hypothetical protein PH 98.6 5.1E-08 1.7E-12 98.2 7.4 114 8-131 17-130 (365)
156 1omo_A Alanine dehydrogenase; 98.6 5.8E-08 2E-12 96.1 7.4 116 6-133 124-241 (322)
157 2g1u_A Hypothetical protein TM 98.6 1.2E-07 4.1E-12 83.4 8.1 116 3-128 15-133 (155)
158 3cea_A MYO-inositol 2-dehydrog 98.6 3.6E-07 1.2E-11 91.0 12.5 119 1-130 2-127 (346)
159 3rc1_A Sugar 3-ketoreductase; 98.5 5E-07 1.7E-11 90.4 13.0 113 7-130 27-144 (350)
160 1guz_A Malate dehydrogenase; o 98.5 4.7E-07 1.6E-11 89.1 12.3 97 8-109 1-119 (310)
161 1tlt_A Putative oxidoreductase 98.5 5.6E-07 1.9E-11 88.7 12.9 112 6-130 4-120 (319)
162 3mz0_A Inositol 2-dehydrogenas 98.5 4.7E-07 1.6E-11 90.3 12.2 114 7-129 2-120 (344)
163 2ho3_A Oxidoreductase, GFO/IDH 98.5 5.9E-07 2E-11 88.8 12.4 114 7-132 1-119 (325)
164 2v6b_A L-LDH, L-lactate dehydr 98.5 5.6E-07 1.9E-11 88.3 11.9 99 8-111 1-119 (304)
165 1xea_A Oxidoreductase, GFO/IDH 98.5 5.5E-07 1.9E-11 89.0 11.8 112 7-130 2-118 (323)
166 2glx_A 1,5-anhydro-D-fructose 98.5 1.3E-06 4.4E-11 86.5 14.0 114 8-132 1-119 (332)
167 2hmt_A YUAA protein; RCK, KTN, 98.5 5.5E-07 1.9E-11 77.2 9.6 100 6-109 5-106 (144)
168 1t2d_A LDH-P, L-lactate dehydr 98.5 9.6E-07 3.3E-11 87.3 12.6 99 7-110 4-128 (322)
169 1lld_A L-lactate dehydrogenase 98.5 4.5E-07 1.5E-11 89.4 9.9 101 6-111 6-127 (319)
170 3hdj_A Probable ornithine cycl 98.5 1.9E-07 6.4E-12 92.0 7.0 116 5-132 119-237 (313)
171 3l4b_C TRKA K+ channel protien 98.5 1.1E-06 3.7E-11 81.7 11.9 98 8-109 1-100 (218)
172 1v8b_A Adenosylhomocysteinase; 98.5 3.4E-07 1.2E-11 94.6 9.1 99 8-120 258-357 (479)
173 3don_A Shikimate dehydrogenase 98.5 5.4E-08 1.8E-12 94.1 3.0 112 7-131 117-231 (277)
174 1ur5_A Malate dehydrogenase; o 98.4 1.2E-06 4.2E-11 86.1 12.5 98 7-109 2-120 (309)
175 3ohs_X Trans-1,2-dihydrobenzen 98.4 1.6E-06 5.5E-11 86.1 13.4 113 7-130 2-121 (334)
176 3u62_A Shikimate dehydrogenase 98.4 2.2E-07 7.4E-12 88.7 6.7 105 9-128 110-216 (253)
177 3ec7_A Putative dehydrogenase; 98.4 1E-06 3.5E-11 88.4 12.0 114 7-129 23-141 (357)
178 2p2s_A Putative oxidoreductase 98.4 1.1E-06 3.9E-11 87.2 12.2 115 6-130 3-121 (336)
179 2p4q_A 6-phosphogluconate dehy 98.4 4E-07 1.4E-11 95.3 9.0 117 310-434 182-303 (497)
180 3e18_A Oxidoreductase; dehydro 98.4 1.7E-06 5.7E-11 86.9 12.7 111 7-129 5-119 (359)
181 1iuk_A Hypothetical protein TT 98.4 2.1E-07 7.3E-12 80.6 5.1 104 8-131 14-122 (140)
182 2iz1_A 6-phosphogluconate dehy 98.4 5.8E-07 2E-11 93.7 8.9 117 310-434 178-300 (474)
183 3phh_A Shikimate dehydrogenase 98.4 3E-07 1E-11 88.3 5.8 110 7-131 118-229 (269)
184 3c1a_A Putative oxidoreductase 98.4 6.3E-07 2.2E-11 88.2 8.3 135 6-168 9-147 (315)
185 3d64_A Adenosylhomocysteinase; 98.4 6.7E-07 2.3E-11 92.7 8.8 97 8-118 278-375 (494)
186 3p2y_A Alanine dehydrogenase/p 98.3 4.6E-07 1.6E-11 90.9 6.8 99 7-109 184-303 (381)
187 3m2t_A Probable dehydrogenase; 98.3 1.1E-06 3.9E-11 88.1 9.7 113 7-129 5-122 (359)
188 3h9u_A Adenosylhomocysteinase; 98.3 8E-07 2.7E-11 90.3 8.2 91 8-112 212-302 (436)
189 1ydw_A AX110P-like protein; st 98.3 3.7E-06 1.3E-10 84.4 13.0 118 7-131 6-127 (362)
190 1y6j_A L-lactate dehydrogenase 98.3 2E-06 6.9E-11 84.9 10.8 105 1-109 1-124 (318)
191 4had_A Probable oxidoreductase 98.3 4E-06 1.4E-10 83.6 12.9 115 5-129 21-140 (350)
192 3e82_A Putative oxidoreductase 98.3 3.4E-06 1.2E-10 84.8 12.4 117 1-130 1-122 (364)
193 3evn_A Oxidoreductase, GFO/IDH 98.3 1.3E-06 4.3E-11 86.6 9.1 115 6-131 4-123 (329)
194 4dio_A NAD(P) transhydrogenase 98.3 7.7E-07 2.6E-11 90.0 7.4 100 7-109 190-313 (405)
195 2pgd_A 6-phosphogluconate dehy 98.3 1E-06 3.5E-11 92.0 8.6 108 310-425 175-285 (482)
196 3moi_A Probable dehydrogenase; 98.3 4.1E-06 1.4E-10 84.9 12.5 113 7-130 2-119 (387)
197 2zyd_A 6-phosphogluconate dehy 98.3 7.8E-07 2.7E-11 92.8 7.2 108 310-425 187-297 (480)
198 3abi_A Putative uncharacterize 98.3 2.3E-06 7.7E-11 86.1 10.4 120 7-137 16-137 (365)
199 1leh_A Leucine dehydrogenase; 98.3 1.5E-06 5.2E-11 87.0 8.4 110 7-131 173-282 (364)
200 1h6d_A Precursor form of gluco 98.3 3.7E-06 1.3E-10 86.5 11.4 119 7-131 83-206 (433)
201 4gmf_A Yersiniabactin biosynth 98.3 1.2E-06 4E-11 88.3 7.4 120 1-130 1-123 (372)
202 2d59_A Hypothetical protein PH 98.2 1.7E-06 5.8E-11 75.2 7.1 104 8-132 23-130 (144)
203 3gvi_A Malate dehydrogenase; N 98.2 6.7E-06 2.3E-10 81.2 11.9 100 6-110 6-126 (324)
204 1ldn_A L-lactate dehydrogenase 98.2 6.9E-06 2.4E-10 80.9 12.0 101 5-109 4-124 (316)
205 1oju_A MDH, malate dehydrogena 98.2 6.5E-06 2.2E-10 80.2 11.4 98 8-110 1-120 (294)
206 3o8q_A Shikimate 5-dehydrogena 98.2 1.6E-06 5.3E-11 84.0 6.8 114 7-130 126-242 (281)
207 3ce6_A Adenosylhomocysteinase; 98.2 4.3E-06 1.5E-10 87.0 10.2 91 8-112 275-365 (494)
208 1zh8_A Oxidoreductase; TM0312, 98.2 1.2E-05 4.2E-10 79.9 13.3 114 6-129 17-136 (340)
209 3f4l_A Putative oxidoreductase 98.2 2.4E-06 8.3E-11 85.2 8.0 113 7-130 2-120 (345)
210 3d0o_A L-LDH 1, L-lactate dehy 98.2 9.8E-06 3.4E-10 79.9 12.1 100 6-109 5-124 (317)
211 3bio_A Oxidoreductase, GFO/IDH 98.2 3.2E-06 1.1E-10 82.9 8.5 106 7-128 9-119 (304)
212 2nvw_A Galactose/lactose metab 98.2 1.1E-05 3.7E-10 84.1 12.6 114 8-129 40-169 (479)
213 3u3x_A Oxidoreductase; structu 98.2 1.3E-05 4.4E-10 80.4 12.8 111 8-128 27-141 (361)
214 1p77_A Shikimate 5-dehydrogena 98.2 1.9E-06 6.4E-11 83.2 6.4 117 7-131 119-237 (272)
215 2i6t_A Ubiquitin-conjugating e 98.2 4.5E-06 1.5E-10 81.7 8.9 97 5-110 12-127 (303)
216 3ulk_A Ketol-acid reductoisome 98.1 8.9E-06 3E-10 81.9 10.6 88 8-107 38-131 (491)
217 3kux_A Putative oxidoreductase 98.1 1.6E-05 5.6E-10 79.3 12.8 111 7-130 7-122 (352)
218 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.1 4.4E-06 1.5E-10 87.0 8.6 107 310-425 177-287 (478)
219 2ixa_A Alpha-N-acetylgalactosa 98.1 1.7E-05 5.8E-10 81.9 12.8 119 7-130 20-146 (444)
220 3p7m_A Malate dehydrogenase; p 98.1 1.7E-05 5.8E-10 78.2 12.2 100 6-110 4-124 (321)
221 1obb_A Maltase, alpha-glucosid 98.1 1.9E-05 6.6E-10 81.7 13.0 74 7-83 3-87 (480)
222 4fb5_A Probable oxidoreductase 98.1 2.1E-05 7.3E-10 79.2 13.1 112 8-129 26-148 (393)
223 4gqa_A NAD binding oxidoreduct 98.1 1.7E-05 5.7E-10 81.0 12.4 112 8-129 27-150 (412)
224 2vhw_A Alanine dehydrogenase; 98.1 3.6E-06 1.2E-10 85.0 7.2 96 7-109 168-269 (377)
225 3btv_A Galactose/lactose metab 98.1 1E-05 3.4E-10 83.4 10.6 119 8-130 21-150 (438)
226 3pqe_A L-LDH, L-lactate dehydr 98.1 1.9E-05 6.4E-10 78.0 11.9 102 5-110 3-124 (326)
227 3fef_A Putative glucosidase LP 98.1 1.5E-05 5.3E-10 81.8 11.6 74 7-84 5-86 (450)
228 1id1_A Putative potassium chan 98.1 5.7E-05 2E-09 65.8 13.8 100 8-110 4-108 (153)
229 3l9w_A Glutathione-regulated p 98.1 1.6E-05 5.5E-10 81.2 11.7 115 6-130 3-119 (413)
230 3tl2_A Malate dehydrogenase; c 98.1 3.1E-05 1E-09 76.1 13.2 99 7-110 8-129 (315)
231 3n58_A Adenosylhomocysteinase; 98.1 1.1E-05 3.9E-10 81.8 10.0 90 8-112 248-338 (464)
232 1npy_A Hypothetical shikimate 98.1 4.5E-06 1.5E-10 80.4 6.6 111 8-132 120-235 (271)
233 3v5n_A Oxidoreductase; structu 98.1 3.5E-05 1.2E-09 78.9 13.6 115 8-129 38-164 (417)
234 3gdo_A Uncharacterized oxidore 98.1 2.2E-05 7.6E-10 78.6 11.9 112 6-130 4-120 (358)
235 3gvp_A Adenosylhomocysteinase 98.1 4.3E-06 1.5E-10 84.8 6.7 90 8-112 221-311 (435)
236 3qy9_A DHPR, dihydrodipicolina 98.1 9.2E-06 3.2E-10 76.8 8.6 84 7-112 3-87 (243)
237 3ldh_A Lactate dehydrogenase; 98.0 1.5E-05 5.2E-10 78.5 10.2 100 6-110 20-140 (330)
238 1nyt_A Shikimate 5-dehydrogena 98.0 2.6E-05 8.9E-10 75.0 11.2 113 7-128 119-232 (271)
239 3i23_A Oxidoreductase, GFO/IDH 98.0 1.6E-05 5.6E-10 79.3 10.1 114 7-130 2-120 (349)
240 1u8x_X Maltose-6'-phosphate gl 98.0 1.8E-05 6.3E-10 81.9 10.6 74 8-84 29-113 (472)
241 3dty_A Oxidoreductase, GFO/IDH 98.0 4.5E-05 1.6E-09 77.4 12.8 116 7-129 12-139 (398)
242 2d4a_B Malate dehydrogenase; a 98.0 3.6E-05 1.2E-09 75.5 11.5 96 9-109 1-117 (308)
243 1gpj_A Glutamyl-tRNA reductase 98.0 1.6E-05 5.3E-10 81.1 9.3 96 7-109 167-267 (404)
244 1ez4_A Lactate dehydrogenase; 98.0 4.4E-05 1.5E-09 75.2 12.2 99 8-110 6-123 (318)
245 2eez_A Alanine dehydrogenase; 98.0 1.4E-05 4.7E-10 80.5 8.7 97 7-110 166-268 (369)
246 1x13_A NAD(P) transhydrogenase 98.0 9.7E-06 3.3E-10 82.5 7.5 93 8-109 173-293 (401)
247 3fhl_A Putative oxidoreductase 98.0 1.8E-05 6E-10 79.4 9.1 112 6-130 4-120 (362)
248 2zqz_A L-LDH, L-lactate dehydr 98.0 5.5E-05 1.9E-09 74.7 12.5 102 5-110 7-127 (326)
249 3nep_X Malate dehydrogenase; h 97.9 4E-05 1.4E-09 75.2 11.0 98 8-110 1-120 (314)
250 2nu8_A Succinyl-COA ligase [AD 97.9 1.9E-05 6.6E-10 76.6 8.7 110 7-131 7-120 (288)
251 2axq_A Saccharopine dehydrogen 97.9 4.6E-05 1.6E-09 78.9 12.0 113 7-131 23-141 (467)
252 1ff9_A Saccharopine reductase; 97.9 6.1E-05 2.1E-09 77.8 12.3 115 7-131 3-121 (450)
253 3do5_A HOM, homoserine dehydro 97.9 2.9E-05 1E-09 76.6 9.2 125 7-137 2-146 (327)
254 3pwz_A Shikimate dehydrogenase 97.9 1.7E-05 6E-10 76.3 7.2 112 7-128 120-233 (272)
255 3jyo_A Quinate/shikimate dehyd 97.9 3.1E-05 1.1E-09 74.9 8.9 117 7-130 127-249 (283)
256 1f06_A MESO-diaminopimelate D- 97.9 1.8E-05 6.3E-10 78.0 7.3 87 7-110 3-91 (320)
257 4h3v_A Oxidoreductase domain p 97.9 6.4E-05 2.2E-09 75.6 11.3 111 8-128 7-131 (390)
258 3fi9_A Malate dehydrogenase; s 97.9 0.00011 3.8E-09 72.9 12.6 76 5-83 6-86 (343)
259 2xxj_A L-LDH, L-lactate dehydr 97.9 7.1E-05 2.4E-09 73.4 11.2 99 8-110 1-118 (310)
260 3vku_A L-LDH, L-lactate dehydr 97.9 7.6E-05 2.6E-09 73.6 11.3 103 4-110 6-127 (326)
261 1s6y_A 6-phospho-beta-glucosid 97.9 7.1E-05 2.4E-09 77.1 11.5 75 7-84 7-94 (450)
262 4gbj_A 6-phosphogluconate dehy 97.8 8.7E-05 3E-09 72.3 11.4 106 310-429 166-271 (297)
263 4ina_A Saccharopine dehydrogen 97.8 5.2E-05 1.8E-09 77.3 9.9 120 7-131 1-138 (405)
264 3oqb_A Oxidoreductase; structu 97.8 0.0001 3.5E-09 74.3 11.7 112 7-129 6-137 (383)
265 3upl_A Oxidoreductase; rossman 97.8 0.00013 4.6E-09 74.5 12.3 115 7-129 23-161 (446)
266 3oa2_A WBPB; oxidoreductase, s 97.8 6.7E-05 2.3E-09 73.8 9.7 113 7-129 3-127 (318)
267 4aj2_A L-lactate dehydrogenase 97.8 0.00015 5.1E-09 71.7 12.1 100 6-110 18-138 (331)
268 1pjc_A Protein (L-alanine dehy 97.8 4.8E-05 1.6E-09 76.3 8.7 99 8-110 168-269 (361)
269 1l7d_A Nicotinamide nucleotide 97.8 3.2E-05 1.1E-09 78.2 7.4 95 7-109 172-295 (384)
270 1lc0_A Biliverdin reductase A; 97.8 6E-05 2E-09 73.3 9.0 116 1-133 1-123 (294)
271 3o9z_A Lipopolysaccaride biosy 97.8 6.7E-05 2.3E-09 73.6 9.4 113 7-129 3-126 (312)
272 2aef_A Calcium-gated potassium 97.7 6.6E-05 2.3E-09 70.2 8.4 111 7-130 9-122 (234)
273 1mld_A Malate dehydrogenase; o 97.7 0.00019 6.6E-09 70.4 11.4 96 8-109 1-118 (314)
274 4ew6_A D-galactose-1-dehydroge 97.7 0.00012 3.9E-09 72.5 9.8 107 7-130 25-136 (330)
275 1oi7_A Succinyl-COA synthetase 97.7 6.3E-05 2.1E-09 73.0 7.6 111 7-132 7-121 (288)
276 3ing_A Homoserine dehydrogenas 97.7 8.6E-05 2.9E-09 73.2 8.6 129 6-137 3-148 (325)
277 3fbt_A Chorismate mutase and s 97.7 0.00015 5.2E-09 69.9 10.1 110 7-131 122-235 (282)
278 3tnl_A Shikimate dehydrogenase 97.7 0.0002 6.7E-09 70.3 11.0 121 8-131 155-284 (315)
279 3ip3_A Oxidoreductase, putativ 97.7 7.6E-05 2.6E-09 74.0 7.9 115 7-128 2-120 (337)
280 3obb_A Probable 3-hydroxyisobu 97.6 9.1E-05 3.1E-09 72.3 8.0 108 310-429 165-276 (300)
281 1smk_A Malate dehydrogenase, g 97.6 0.00017 5.8E-09 71.2 9.9 97 6-109 7-126 (326)
282 3mtj_A Homoserine dehydrogenas 97.6 0.0003 1E-08 72.1 11.6 118 8-137 11-141 (444)
283 2yv1_A Succinyl-COA ligase [AD 97.6 0.00013 4.4E-09 71.0 8.4 109 8-131 14-126 (294)
284 1nvt_A Shikimate 5'-dehydrogen 97.6 0.00012 4.1E-09 70.9 8.0 115 8-130 129-250 (287)
285 4f3y_A DHPR, dihydrodipicolina 97.6 0.00011 3.7E-09 70.6 7.1 96 6-113 6-109 (272)
286 2czc_A Glyceraldehyde-3-phosph 97.6 0.0002 6.9E-09 70.9 9.3 94 7-107 2-109 (334)
287 2x0j_A Malate dehydrogenase; o 97.5 0.00048 1.7E-08 66.8 11.1 98 8-110 1-120 (294)
288 1c1d_A L-phenylalanine dehydro 97.5 0.00053 1.8E-08 68.1 11.3 108 8-131 176-283 (355)
289 4g65_A TRK system potassium up 97.5 0.00012 4.2E-09 75.7 7.0 86 7-96 3-90 (461)
290 3ius_A Uncharacterized conserv 97.5 0.00021 7.1E-09 68.5 7.7 71 5-83 3-73 (286)
291 1b8p_A Protein (malate dehydro 97.4 0.0008 2.7E-08 66.4 11.9 101 6-109 4-134 (329)
292 2vt3_A REX, redox-sensing tran 97.4 4.1E-05 1.4E-09 70.9 2.4 79 7-95 85-166 (215)
293 3ond_A Adenosylhomocysteinase; 97.4 0.00028 9.5E-09 72.8 8.7 90 8-111 266-355 (488)
294 3c8m_A Homoserine dehydrogenas 97.4 0.0002 7E-09 70.8 7.5 125 7-136 6-151 (331)
295 2yv2_A Succinyl-COA synthetase 97.4 0.00044 1.5E-08 67.3 9.2 113 7-131 13-127 (297)
296 3t4e_A Quinate/shikimate dehyd 97.4 0.00071 2.4E-08 66.2 10.4 117 8-131 149-278 (312)
297 2fp4_A Succinyl-COA ligase [GD 97.3 0.00026 9E-09 69.1 6.8 109 8-131 14-128 (305)
298 1nvm_B Acetaldehyde dehydrogen 97.3 0.0003 1E-08 69.0 7.1 94 7-110 4-106 (312)
299 3eag_A UDP-N-acetylmuramate:L- 97.3 0.001 3.4E-08 65.6 11.0 114 6-127 3-135 (326)
300 1j5p_A Aspartate dehydrogenase 97.3 0.00026 8.8E-09 66.9 6.2 108 7-137 12-124 (253)
301 1edz_A 5,10-methylenetetrahydr 97.3 4.1E-05 1.4E-09 74.9 0.6 91 7-110 177-277 (320)
302 3ngx_A Bifunctional protein fo 97.3 0.00054 1.8E-08 65.3 8.3 74 8-111 151-225 (276)
303 1o6z_A MDH, malate dehydrogena 97.3 0.0016 5.4E-08 63.5 11.9 98 8-109 1-120 (303)
304 3r6d_A NAD-dependent epimerase 97.3 0.00073 2.5E-08 62.1 8.8 73 7-84 4-84 (221)
305 3ijp_A DHPR, dihydrodipicolina 97.3 0.00052 1.8E-08 66.2 7.8 96 7-113 21-124 (288)
306 1vl6_A Malate oxidoreductase; 97.3 0.0012 4.3E-08 65.8 10.6 117 6-133 191-316 (388)
307 1cf2_P Protein (glyceraldehyde 97.2 0.00079 2.7E-08 66.7 9.0 97 7-110 1-111 (337)
308 1b7g_O Protein (glyceraldehyde 97.2 0.002 7E-08 63.8 11.8 97 7-110 1-110 (340)
309 3ff4_A Uncharacterized protein 97.2 0.00039 1.3E-08 58.3 5.5 103 7-131 4-110 (122)
310 1ys4_A Aspartate-semialdehyde 97.2 0.00024 8.1E-09 71.0 4.9 100 1-111 1-117 (354)
311 3hhp_A Malate dehydrogenase; M 97.2 0.0039 1.3E-07 60.9 13.4 97 8-110 1-120 (312)
312 2b0j_A 5,10-methenyltetrahydro 97.2 0.012 4.2E-07 55.6 15.6 151 57-220 128-280 (358)
313 4a26_A Putative C-1-tetrahydro 97.1 0.0008 2.7E-08 65.0 7.5 73 8-110 166-241 (300)
314 1dih_A Dihydrodipicolinate red 97.1 0.00019 6.6E-09 69.0 3.1 98 7-112 5-107 (273)
315 3tum_A Shikimate dehydrogenase 97.1 0.0013 4.4E-08 63.0 8.5 117 8-131 126-246 (269)
316 3qvo_A NMRA family protein; st 97.1 0.00045 1.5E-08 64.5 5.2 74 7-84 23-99 (236)
317 3ew7_A LMO0794 protein; Q8Y8U8 97.1 0.0017 5.7E-08 59.3 8.8 71 8-84 1-72 (221)
318 1p9l_A Dihydrodipicolinate red 97.0 0.014 4.7E-07 55.0 14.7 97 8-133 1-103 (245)
319 3dr3_A N-acetyl-gamma-glutamyl 97.0 0.00068 2.3E-08 67.0 5.8 98 7-111 4-109 (337)
320 3l07_A Bifunctional protein fo 97.0 0.0017 5.7E-08 62.3 8.2 73 8-110 162-235 (285)
321 1a4i_A Methylenetetrahydrofola 97.0 0.0017 5.8E-08 62.6 8.2 74 8-111 166-240 (301)
322 3h2s_A Putative NADH-flavin re 97.0 0.0022 7.6E-08 58.7 8.7 71 8-83 1-72 (224)
323 1b0a_A Protein (fold bifunctio 97.0 0.0015 5.2E-08 62.6 7.7 74 8-111 160-234 (288)
324 3p2o_A Bifunctional protein fo 97.0 0.0016 5.3E-08 62.5 7.7 74 8-111 161-235 (285)
325 3lk7_A UDP-N-acetylmuramoylala 97.0 0.0037 1.3E-07 64.3 11.3 114 7-128 9-140 (451)
326 2yyy_A Glyceraldehyde-3-phosph 96.9 0.0031 1.1E-07 62.4 10.1 97 7-109 2-114 (343)
327 1lnq_A MTHK channels, potassiu 96.9 0.0019 6.5E-08 63.7 8.5 95 8-109 116-213 (336)
328 1jw9_B Molybdopterin biosynthe 96.9 0.0021 7.1E-08 60.8 8.3 33 8-40 32-65 (249)
329 2ejw_A HDH, homoserine dehydro 96.9 0.00039 1.3E-08 68.7 3.3 85 7-107 3-97 (332)
330 2c2x_A Methylenetetrahydrofola 96.9 0.0016 5.3E-08 62.3 7.2 74 8-111 159-235 (281)
331 3g0o_A 3-hydroxyisobutyrate de 96.9 0.014 4.7E-07 56.6 14.2 104 311-429 172-275 (303)
332 3keo_A Redox-sensing transcrip 96.9 0.00027 9.2E-09 65.1 1.8 82 7-96 84-170 (212)
333 2dt5_A AT-rich DNA-binding pro 96.9 0.00015 5.2E-09 66.9 0.0 80 7-95 80-161 (211)
334 4a5o_A Bifunctional protein fo 96.8 0.0025 8.6E-08 61.0 8.1 74 8-111 162-236 (286)
335 1xyg_A Putative N-acetyl-gamma 96.8 0.0024 8.2E-08 63.7 8.2 94 8-111 17-115 (359)
336 4dll_A 2-hydroxy-3-oxopropiona 96.8 0.019 6.7E-07 56.1 14.5 104 311-429 192-295 (320)
337 1u8f_O GAPDH, glyceraldehyde-3 96.8 0.0037 1.3E-07 61.7 9.0 100 7-110 3-124 (335)
338 3e8x_A Putative NAD-dependent 96.7 0.0026 8.9E-08 59.0 7.2 73 7-84 21-95 (236)
339 2ozp_A N-acetyl-gamma-glutamyl 96.7 0.0021 7E-08 63.9 6.6 96 7-111 4-102 (345)
340 1up7_A 6-phospho-beta-glucosid 96.7 0.013 4.6E-07 59.4 12.5 74 7-84 2-84 (417)
341 3h8v_A Ubiquitin-like modifier 96.7 0.0092 3.2E-07 57.6 10.6 128 7-136 36-172 (292)
342 3dhn_A NAD-dependent epimerase 96.6 0.0023 7.7E-08 58.9 6.0 71 7-83 4-77 (227)
343 3e5r_O PP38, glyceraldehyde-3- 96.6 0.005 1.7E-07 60.8 8.7 95 8-109 4-127 (337)
344 3pef_A 6-phosphogluconate dehy 96.6 0.016 5.3E-07 55.7 12.0 105 310-429 163-267 (287)
345 3u95_A Glycoside hydrolase, fa 96.6 0.0017 5.8E-08 67.3 5.3 71 8-81 1-84 (477)
346 1hdo_A Biliverdin IX beta redu 96.6 0.0042 1.4E-07 55.8 7.2 69 8-83 4-77 (206)
347 3dfz_A SIRC, precorrin-2 dehyd 96.5 0.011 3.7E-07 54.8 10.0 77 7-94 31-111 (223)
348 4h7p_A Malate dehydrogenase; s 96.5 0.019 6.5E-07 56.8 12.1 98 9-110 26-152 (345)
349 3dqp_A Oxidoreductase YLBE; al 96.5 0.0047 1.6E-07 56.5 7.2 70 8-84 1-74 (219)
350 3c1o_A Eugenol synthase; pheny 96.5 0.0076 2.6E-07 58.5 9.0 36 5-40 2-38 (321)
351 2r6j_A Eugenol synthase 1; phe 96.5 0.0067 2.3E-07 58.8 8.5 35 7-41 11-46 (318)
352 3pdu_A 3-hydroxyisobutyrate de 96.4 0.037 1.2E-06 53.0 13.3 104 311-429 164-267 (287)
353 2ph5_A Homospermidine synthase 96.4 0.0072 2.5E-07 62.0 8.1 99 7-134 13-115 (480)
354 4hv4_A UDP-N-acetylmuramate--L 96.3 0.018 6E-07 60.0 11.1 112 7-127 22-149 (494)
355 2nqt_A N-acetyl-gamma-glutamyl 96.3 0.0021 7E-08 64.0 3.6 95 7-112 9-114 (352)
356 2gas_A Isoflavone reductase; N 96.3 0.011 3.6E-07 56.9 8.6 34 7-40 2-36 (307)
357 1vkn_A N-acetyl-gamma-glutamyl 96.3 0.0089 3E-07 59.2 8.1 95 7-111 13-110 (351)
358 1qyd_A Pinoresinol-lariciresin 96.3 0.014 4.7E-07 56.3 9.4 73 7-83 4-86 (313)
359 5mdh_A Malate dehydrogenase; o 96.3 0.023 7.9E-07 55.9 11.0 101 7-110 3-131 (333)
360 4e6p_A Probable sorbitol dehyd 96.3 0.026 8.7E-07 53.2 10.9 90 1-110 2-92 (259)
361 3ged_A Short-chain dehydrogena 96.2 0.017 6E-07 54.3 9.3 81 8-109 2-84 (247)
362 4e21_A 6-phosphogluconate dehy 96.2 0.0023 8E-08 63.8 3.4 68 215-292 259-327 (358)
363 4gx0_A TRKA domain protein; me 96.2 0.0041 1.4E-07 65.9 5.4 94 8-110 349-445 (565)
364 1zud_1 Adenylyltransferase THI 96.2 0.013 4.4E-07 55.3 8.4 34 7-40 28-62 (251)
365 2ep5_A 350AA long hypothetical 96.1 0.0088 3E-07 59.4 7.0 96 7-110 4-110 (350)
366 4eso_A Putative oxidoreductase 96.1 0.025 8.5E-07 53.2 9.9 82 9-110 10-92 (255)
367 2tmg_A Protein (glutamate dehy 96.1 0.035 1.2E-06 56.1 11.4 114 8-131 210-336 (415)
368 1hye_A L-lactate/malate dehydr 96.0 0.029 9.9E-07 54.7 10.4 71 8-82 1-83 (313)
369 3aog_A Glutamate dehydrogenase 96.0 0.021 7.4E-07 58.0 9.7 115 7-131 235-361 (440)
370 3kkj_A Amine oxidase, flavin-c 96.0 0.0055 1.9E-07 56.2 4.9 33 8-40 3-35 (336)
371 2dvm_A Malic enzyme, 439AA lon 96.0 0.017 6E-07 58.8 8.9 112 7-130 186-315 (439)
372 1y1p_A ARII, aldehyde reductas 96.0 0.043 1.5E-06 53.3 11.6 43 6-48 10-53 (342)
373 3aoe_E Glutamate dehydrogenase 96.0 0.033 1.1E-06 56.4 10.6 111 7-131 218-340 (419)
374 4fn4_A Short chain dehydrogena 96.0 0.033 1.1E-06 52.6 10.1 84 9-109 8-93 (254)
375 1qyc_A Phenylcoumaran benzylic 95.9 0.017 6E-07 55.4 8.3 34 7-40 4-38 (308)
376 1y7t_A Malate dehydrogenase; N 95.9 0.042 1.4E-06 53.8 11.1 72 8-82 5-89 (327)
377 1ebf_A Homoserine dehydrogenas 95.9 0.0048 1.7E-07 61.5 4.2 35 6-40 3-42 (358)
378 3cps_A Glyceraldehyde 3-phosph 95.9 0.033 1.1E-06 55.2 10.0 96 7-109 17-139 (354)
379 3i6i_A Putative leucoanthocyan 95.9 0.018 6.3E-07 56.5 8.3 34 7-40 10-44 (346)
380 3hn7_A UDP-N-acetylmuramate-L- 95.9 0.034 1.2E-06 58.3 10.6 113 7-127 19-149 (524)
381 1nff_A Putative oxidoreductase 95.8 0.055 1.9E-06 51.0 11.1 90 1-110 1-91 (260)
382 3doj_A AT3G25530, dehydrogenas 95.8 0.082 2.8E-06 51.3 12.4 105 310-429 183-287 (310)
383 3m2p_A UDP-N-acetylglucosamine 95.8 0.007 2.4E-07 58.5 4.7 38 7-44 2-40 (311)
384 3l6d_A Putative oxidoreductase 95.7 0.019 6.4E-07 55.8 7.6 100 312-429 174-275 (306)
385 3pwk_A Aspartate-semialdehyde 95.7 0.0038 1.3E-07 62.3 2.5 92 7-111 2-98 (366)
386 4hb9_A Similarities with proba 95.7 0.0071 2.4E-07 60.4 4.6 35 7-41 1-35 (412)
387 3tfo_A Putative 3-oxoacyl-(acy 95.7 0.029 1E-06 53.1 8.6 83 9-110 6-91 (264)
388 3l6e_A Oxidoreductase, short-c 95.7 0.05 1.7E-06 50.4 10.1 83 8-110 4-87 (235)
389 2pd6_A Estradiol 17-beta-dehyd 95.7 0.06 2.1E-06 50.4 10.8 100 1-110 1-102 (264)
390 3e48_A Putative nucleoside-dip 95.7 0.014 4.8E-07 55.6 6.4 71 8-83 1-75 (289)
391 4gx0_A TRKA domain protein; me 95.7 0.04 1.4E-06 58.2 10.5 97 7-109 127-226 (565)
392 4fgs_A Probable dehydrogenase 95.7 0.042 1.4E-06 52.5 9.6 82 9-110 30-113 (273)
393 3ftp_A 3-oxoacyl-[acyl-carrier 95.7 0.049 1.7E-06 51.7 10.0 85 9-110 29-115 (270)
394 3tox_A Short chain dehydrogena 95.7 0.032 1.1E-06 53.3 8.8 83 9-110 10-95 (280)
395 4dpk_A Malonyl-COA/succinyl-CO 95.6 0.011 3.9E-07 58.8 5.6 92 7-111 7-113 (359)
396 4dpl_A Malonyl-COA/succinyl-CO 95.6 0.011 3.9E-07 58.8 5.6 92 7-111 7-113 (359)
397 2yfq_A Padgh, NAD-GDH, NAD-spe 95.6 0.025 8.5E-07 57.3 8.0 114 8-131 213-343 (421)
398 1xgk_A Nitrogen metabolite rep 95.6 0.027 9.2E-07 55.8 8.2 73 7-83 5-83 (352)
399 3dii_A Short-chain dehydrogena 95.6 0.042 1.4E-06 51.3 9.2 81 9-110 4-85 (247)
400 2a9f_A Putative malic enzyme ( 95.6 0.0074 2.5E-07 60.3 4.0 101 7-115 188-296 (398)
401 2r00_A Aspartate-semialdehyde 95.6 0.0036 1.2E-07 61.8 1.8 91 6-111 2-99 (336)
402 3qha_A Putative oxidoreductase 95.6 0.044 1.5E-06 52.9 9.4 103 310-428 173-284 (296)
403 3hsk_A Aspartate-semialdehyde 95.5 0.014 4.8E-07 58.5 5.8 95 7-111 19-127 (381)
404 1lu9_A Methylene tetrahydromet 95.5 0.025 8.7E-07 54.2 7.5 42 8-49 120-162 (287)
405 3gvc_A Oxidoreductase, probabl 95.5 0.069 2.4E-06 50.9 10.5 81 10-110 32-113 (277)
406 4g81_D Putative hexonate dehyd 95.5 0.038 1.3E-06 52.2 8.6 83 9-110 10-96 (255)
407 3ucx_A Short chain dehydrogena 95.5 0.048 1.7E-06 51.4 9.3 83 9-110 13-98 (264)
408 3d3w_A L-xylulose reductase; u 95.5 0.048 1.7E-06 50.4 9.2 43 6-48 6-49 (244)
409 3imf_A Short chain dehydrogena 95.5 0.076 2.6E-06 49.8 10.7 85 9-110 8-93 (257)
410 1cyd_A Carbonyl reductase; sho 95.5 0.045 1.5E-06 50.6 8.9 44 5-48 5-49 (244)
411 2csu_A 457AA long hypothetical 95.5 0.011 3.8E-07 60.8 5.2 106 8-131 9-126 (457)
412 1zem_A Xylitol dehydrogenase; 95.5 0.048 1.7E-06 51.3 9.3 85 7-110 7-94 (262)
413 1gee_A Glucose 1-dehydrogenase 95.5 0.039 1.3E-06 51.7 8.5 48 1-48 1-50 (261)
414 2x4g_A Nucleoside-diphosphate- 95.5 0.013 4.6E-07 57.1 5.5 72 6-82 12-86 (342)
415 3f1l_A Uncharacterized oxidore 95.5 0.098 3.4E-06 48.9 11.3 86 9-110 14-102 (252)
416 2x5o_A UDP-N-acetylmuramoylala 95.5 0.038 1.3E-06 56.5 8.9 114 7-129 5-133 (439)
417 3lf2_A Short chain oxidoreduct 95.5 0.11 3.7E-06 49.0 11.6 85 9-110 10-97 (265)
418 2d8a_A PH0655, probable L-thre 95.4 0.037 1.3E-06 54.5 8.6 95 8-109 169-268 (348)
419 2jah_A Clavulanic acid dehydro 95.4 0.061 2.1E-06 50.2 9.6 84 8-110 8-94 (247)
420 7mdh_A Protein (malate dehydro 95.4 0.055 1.9E-06 54.0 9.6 100 8-110 33-160 (375)
421 3afn_B Carbonyl reductase; alp 95.4 0.029 9.8E-07 52.3 7.2 93 1-110 1-95 (258)
422 3ai3_A NADPH-sorbose reductase 95.4 0.075 2.6E-06 49.9 10.1 85 8-110 8-95 (263)
423 3rui_A Ubiquitin-like modifier 95.4 0.063 2.2E-06 52.8 9.7 125 7-133 34-171 (340)
424 3i1j_A Oxidoreductase, short c 95.3 0.11 3.7E-06 48.2 11.0 86 9-110 16-104 (247)
425 3tjr_A Short chain dehydrogena 95.3 0.066 2.3E-06 51.6 9.9 85 9-110 33-118 (301)
426 3njr_A Precorrin-6Y methylase; 95.3 0.16 5.5E-06 45.9 11.9 118 8-131 57-176 (204)
427 1xq6_A Unknown protein; struct 95.3 0.031 1.1E-06 51.6 7.2 71 6-82 3-78 (253)
428 3o38_A Short chain dehydrogena 95.3 0.069 2.4E-06 50.2 9.8 87 8-110 23-111 (266)
429 3tpc_A Short chain alcohol deh 95.3 0.055 1.9E-06 50.7 9.0 84 8-111 8-92 (257)
430 2ehd_A Oxidoreductase, oxidore 95.3 0.087 3E-06 48.4 10.2 41 8-48 6-47 (234)
431 3sju_A Keto reductase; short-c 95.3 0.048 1.7E-06 51.9 8.7 84 10-110 27-111 (279)
432 3hm2_A Precorrin-6Y C5,15-meth 95.3 0.096 3.3E-06 45.5 10.0 120 8-132 27-150 (178)
433 2qrj_A Saccharopine dehydrogen 95.3 0.012 4.2E-07 58.9 4.6 83 7-110 214-302 (394)
434 2wsb_A Galactitol dehydrogenas 95.3 0.12 4.3E-06 47.8 11.4 40 9-48 13-53 (254)
435 2zcu_A Uncharacterized oxidore 95.3 0.042 1.4E-06 52.0 8.1 69 9-82 1-74 (286)
436 3tzq_B Short-chain type dehydr 95.3 0.087 3E-06 49.8 10.3 83 9-111 13-96 (271)
437 3b1j_A Glyceraldehyde 3-phosph 95.2 0.049 1.7E-06 53.7 8.6 42 7-48 2-48 (339)
438 3svt_A Short-chain type dehydr 95.2 0.054 1.9E-06 51.5 8.8 87 8-110 12-101 (281)
439 2wm3_A NMRA-like family domain 95.2 0.035 1.2E-06 53.1 7.4 71 7-82 5-81 (299)
440 2d2i_A Glyceraldehyde 3-phosph 95.2 0.051 1.8E-06 54.2 8.6 42 7-48 2-48 (380)
441 1geg_A Acetoin reductase; SDR 95.2 0.069 2.4E-06 50.0 9.2 83 9-110 4-89 (256)
442 1vm6_A DHPR, dihydrodipicolina 95.2 0.081 2.8E-06 48.8 9.3 94 7-133 12-108 (228)
443 3guy_A Short-chain dehydrogena 95.2 0.056 1.9E-06 49.7 8.4 41 8-48 2-43 (230)
444 1yde_A Retinal dehydrogenase/r 95.2 0.1 3.5E-06 49.4 10.4 81 9-110 11-92 (270)
445 1pl8_A Human sorbitol dehydrog 95.2 0.12 4E-06 51.1 11.3 93 8-109 173-274 (356)
446 3rkr_A Short chain oxidoreduct 95.2 0.061 2.1E-06 50.6 8.8 85 9-110 31-116 (262)
447 4dyv_A Short-chain dehydrogena 95.2 0.11 3.6E-06 49.4 10.5 82 9-110 29-112 (272)
448 3nyw_A Putative oxidoreductase 95.1 0.075 2.6E-06 49.7 9.3 89 8-110 8-97 (250)
449 3h7a_A Short chain dehydrogena 95.1 0.047 1.6E-06 51.2 7.8 83 8-110 8-93 (252)
450 3qiv_A Short-chain dehydrogena 95.1 0.077 2.6E-06 49.4 9.3 83 9-110 11-96 (253)
451 2x5j_O E4PDH, D-erythrose-4-ph 95.1 0.053 1.8E-06 53.4 8.4 42 7-48 2-49 (339)
452 4g65_A TRK system potassium up 95.1 0.082 2.8E-06 54.4 10.2 99 7-109 235-335 (461)
453 1pqw_A Polyketide synthase; ro 95.1 0.037 1.3E-06 49.6 6.8 40 8-47 40-80 (198)
454 2hjs_A USG-1 protein homolog; 95.1 0.013 4.4E-07 58.0 3.9 90 7-111 6-102 (340)
455 4a7p_A UDP-glucose dehydrogena 95.1 0.049 1.7E-06 55.8 8.4 110 7-133 322-441 (446)
456 2pnf_A 3-oxoacyl-[acyl-carrier 95.1 0.091 3.1E-06 48.5 9.6 85 8-110 8-95 (248)
457 3gpi_A NAD-dependent epimerase 95.1 0.02 6.8E-07 54.5 5.1 37 6-42 2-38 (286)
458 3h9e_O Glyceraldehyde-3-phosph 95.1 0.077 2.6E-06 52.1 9.3 49 1-49 1-52 (346)
459 3n74_A 3-ketoacyl-(acyl-carrie 95.1 0.13 4.4E-06 48.1 10.7 83 8-110 10-93 (261)
460 3e05_A Precorrin-6Y C5,15-meth 95.1 0.15 5.3E-06 45.6 10.9 116 8-127 42-160 (204)
461 2jl1_A Triphenylmethane reduct 95.1 0.025 8.4E-07 53.7 5.7 70 8-82 1-75 (287)
462 2ew8_A (S)-1-phenylethanol deh 95.0 0.12 4.1E-06 48.1 10.4 83 8-110 8-92 (249)
463 1yqd_A Sinapyl alcohol dehydro 95.0 0.054 1.9E-06 53.8 8.3 94 8-109 189-283 (366)
464 3awd_A GOX2181, putative polyo 95.0 0.087 3E-06 49.1 9.3 86 8-110 14-100 (260)
465 2cfc_A 2-(R)-hydroxypropyl-COM 95.0 0.095 3.2E-06 48.5 9.5 87 8-110 3-90 (250)
466 4dry_A 3-oxoacyl-[acyl-carrier 95.0 0.11 3.7E-06 49.6 10.1 85 9-110 34-121 (281)
467 3lyl_A 3-oxoacyl-(acyl-carrier 95.0 0.089 3.1E-06 48.8 9.3 86 9-111 7-93 (247)
468 3r1i_A Short-chain type dehydr 95.0 0.072 2.5E-06 50.7 8.8 85 9-110 34-119 (276)
469 3ak4_A NADH-dependent quinucli 95.0 0.17 5.8E-06 47.4 11.3 83 8-110 13-96 (263)
470 2q3e_A UDP-glucose 6-dehydroge 95.0 0.15 5.1E-06 52.5 11.7 114 7-133 329-464 (467)
471 1tt5_A APPBP1, amyloid protein 94.9 0.054 1.9E-06 56.7 8.3 125 8-136 33-159 (531)
472 3op4_A 3-oxoacyl-[acyl-carrier 94.9 0.15 5E-06 47.6 10.7 82 9-110 11-93 (248)
473 3k92_A NAD-GDH, NAD-specific g 94.9 0.048 1.6E-06 55.1 7.6 170 8-225 222-408 (424)
474 2dkn_A 3-alpha-hydroxysteroid 94.9 0.019 6.6E-07 53.3 4.5 36 7-42 1-37 (255)
475 1t4b_A Aspartate-semialdehyde 94.9 0.03 1E-06 55.9 6.0 92 7-110 1-100 (367)
476 2h7i_A Enoyl-[acyl-carrier-pro 94.9 0.071 2.4E-06 50.3 8.5 91 1-111 1-98 (269)
477 3ioy_A Short-chain dehydrogena 94.9 0.089 3E-06 51.2 9.3 88 8-110 9-97 (319)
478 4e3z_A Putative oxidoreductase 94.9 0.13 4.3E-06 48.6 10.2 84 8-110 26-114 (272)
479 4gsl_A Ubiquitin-like modifier 94.9 0.08 2.7E-06 55.9 9.3 125 7-133 326-463 (615)
480 3slg_A PBGP3 protein; structur 94.9 0.014 4.9E-07 57.7 3.6 41 6-46 23-65 (372)
481 1hdc_A 3-alpha, 20 beta-hydrox 94.9 0.16 5.6E-06 47.4 10.8 83 8-110 6-89 (254)
482 4dqx_A Probable oxidoreductase 94.9 0.15 5.3E-06 48.4 10.7 82 9-110 29-111 (277)
483 3grp_A 3-oxoacyl-(acyl carrier 94.8 0.14 4.7E-06 48.4 10.2 83 9-111 29-112 (266)
484 3cmc_O GAPDH, glyceraldehyde-3 94.8 0.04 1.4E-06 54.2 6.5 98 7-109 1-122 (334)
485 1yb1_A 17-beta-hydroxysteroid 94.8 0.12 4.3E-06 48.7 9.9 86 8-110 32-118 (272)
486 4fc7_A Peroxisomal 2,4-dienoyl 94.8 0.16 5.4E-06 48.2 10.7 84 9-110 29-115 (277)
487 4da9_A Short-chain dehydrogena 94.8 0.12 4.2E-06 49.1 9.9 84 10-110 32-117 (280)
488 3gaf_A 7-alpha-hydroxysteroid 94.8 0.093 3.2E-06 49.2 8.9 83 9-110 14-99 (256)
489 2z1n_A Dehydrogenase; reductas 94.8 0.16 5.5E-06 47.5 10.5 87 8-110 8-95 (260)
490 3h2z_A Mannitol-1-phosphate 5- 94.8 0.12 4E-06 51.8 9.9 103 8-111 1-124 (382)
491 3rwb_A TPLDH, pyridoxal 4-dehy 94.8 0.12 4.1E-06 48.1 9.6 81 8-110 7-90 (247)
492 3m1a_A Putative dehydrogenase; 94.8 0.1 3.6E-06 49.4 9.3 83 8-110 6-89 (281)
493 3l77_A Short-chain alcohol deh 94.8 0.092 3.2E-06 48.3 8.6 85 8-110 3-90 (235)
494 3ip1_A Alcohol dehydrogenase, 94.7 0.18 6.2E-06 50.7 11.5 98 8-109 215-319 (404)
495 3h5n_A MCCB protein; ubiquitin 94.7 0.17 5.8E-06 50.1 11.0 125 7-136 118-244 (353)
496 1hdg_O Holo-D-glyceraldehyde-3 94.7 0.1 3.6E-06 51.1 9.3 97 8-109 1-123 (332)
497 1uls_A Putative 3-oxoacyl-acyl 94.7 0.21 7E-06 46.4 11.0 81 8-110 6-87 (245)
498 3s2e_A Zinc-containing alcohol 94.7 0.05 1.7E-06 53.4 7.0 95 8-109 168-264 (340)
499 2ae2_A Protein (tropinone redu 94.7 0.14 4.8E-06 47.9 9.9 84 8-110 10-97 (260)
500 1gad_O D-glyceraldehyde-3-phos 94.7 0.072 2.5E-06 52.3 8.1 98 7-111 1-122 (330)
No 1
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=100.00 E-value=1.1e-108 Score=859.14 Aligned_cols=461 Identities=48% Similarity=0.837 Sum_probs=426.2
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.+|+|||||+|.||.+||.+|+++||+|++|||++++++++.+.+.. +.++..+.+++|+++.|+.+|+||+|||+++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~--g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~ 80 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK--GTKVVGAQSLKEMVSKLKKPRRIILLVKAGQ 80 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTT--TSSCEECSSHHHHHHTBCSSCEEEECSCSSH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccC--CCceeccCCHHHHHhhccCCCEEEEecCChH
Confidence 46789999999999999999999999999999999999998876422 1134557899999987777999999999988
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccccCCCHHHHHHHHHHHHH
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLK 165 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~ 165 (474)
+++++++++.+.+++|++|||+||+.|.++.++.+.+.++|++|+++||+|++.++++|+++|+||+++++++++++|+.
T Consensus 81 ~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~~im~GG~~ea~~~v~pll~~ 160 (484)
T 4gwg_A 81 AVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSLMPGGNKEAWPHIKTIFQG 160 (484)
T ss_dssp HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCCeeecCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhHhhhcc
Q 011931 166 VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLTNEELQNVFTEWNKGELLSFLIEITAD 244 (474)
Q Consensus 166 lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~-~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~ 244 (474)
++.++.+++||+.|+|+.|+||++||+||+++++++++++|++.++++ .| ++++++.++|+.|+.|.+.||+++++.+
T Consensus 161 ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~G-ld~~~l~~v~~~w~~G~~~S~l~e~~~~ 239 (484)
T 4gwg_A 161 IAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLG-MAQDEMAQAFEDWNKTELDSFLIEITAN 239 (484)
T ss_dssp HSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHTTTTTCBHHHHHHHH
T ss_pred hcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHcCCCccchHHHHHHH
Confidence 999876788999999999999999999999999999999999999999 88 9999999999999999999999999999
Q ss_pred cccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH-------------HHHHHHHHhccCCCCCCCCCCcc
Q 011931 245 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI-------------EERVEAAKVFKSGGFGVQSNQAV 311 (474)
Q Consensus 245 ~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~-------------~~r~~~~~~~~~~~~~~~~~~~~ 311 (474)
++..+| +.+++.+|.|+|.++|||||+|++++|.++|||+|++ ++|.++++++++|.+. ....
T Consensus 240 ~l~~~D-~~g~~~ld~i~d~~~~kgtG~wt~~~A~~~gvp~p~i~~av~~R~~S~~k~~r~~a~~~l~~~~~~---~~~~ 315 (484)
T 4gwg_A 240 ILKFQD-TDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQKF---QFDG 315 (484)
T ss_dssp HHHCBC-TTSSBSGGGSCCCCCSSCTTHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHTTCCCC--C---CCCS
T ss_pred HHhcCC-ccCCccHHHHhccccCcchHHHHHHHHHHcCCCchHHHHHHHHHHHhhchHHHHHHHhhcCCCCcc---cccc
Confidence 998766 4567999999999999999999999999999999988 7899999999877421 1245
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccChH
Q 011931 312 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPE 391 (474)
Q Consensus 312 ~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~~~ 391 (474)
+..+|+|+||||+||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+|||+||.
T Consensus 316 ~~~~~~~~~~~al~~~~i~~yaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~ll~~~~ 395 (484)
T 4gwg_A 316 DKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDF 395 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSTTCTTCBHHHHHHHHHHHHCTTCSCGGGSHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHccCceeHHHHHHHHHHHHHhCCCchhhhcCHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhHHHHHHhhccCCccceeccCCCc-cccccccCCC
Q 011931 392 FAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERIDMEGS-FHTEWFKIAK 470 (474)
Q Consensus 392 ~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~~~~~~~~~~~i~a~rd~fG~h~~~r~d~~~~-~h~~w~~~~~ 470 (474)
|.+.+++.++.||+||..|++.|||+|++|+||+||++||++++|+|||||||||||+|||+|+|++|. ||++|++++.
T Consensus 396 f~~~~~~~~~~~r~vv~~a~~~gip~P~~s~al~y~~~~r~~~lpanliqaqRd~FGaH~~~r~d~~g~~~h~~w~~~~~ 475 (484)
T 4gwg_A 396 FKSAVENCQDSWRRAVSTGVQAGIPMPCFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGG 475 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSCCTHHHHHHHHHHHHCCCEEETTEEEEEECCCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhccCCCHHHHHHHHHHhhCCcceEecCCCCCccccCcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999995 8999987555
Q ss_pred CCC
Q 011931 471 QSK 473 (474)
Q Consensus 471 ~~~ 473 (474)
+++
T Consensus 476 ~~~ 478 (484)
T 4gwg_A 476 TVS 478 (484)
T ss_dssp ---
T ss_pred Ccc
Confidence 543
No 2
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-100 Score=805.21 Aligned_cols=460 Identities=49% Similarity=0.865 Sum_probs=421.5
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHH-hhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE-RAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
+..+|||||+|.||.+||.+|+++||+|++|||++++++++.+ ..... ++..+.+++++++.|+++|+||+|||++
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~---gi~~~~s~~e~v~~l~~aDvVil~Vp~~ 85 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGK---SIIGATSIEDFISKLKRPRKVMLLVKAG 85 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTS---SEECCSSHHHHHHTSCSSCEEEECCCSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCC---CeEEeCCHHHHHhcCCCCCEEEEEcCCh
Confidence 4468999999999999999999999999999999999998876 21101 3677889999998777899999999998
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccccCCCHHHHHHHHHHHH
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILL 164 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~ 164 (474)
.+++++++++.+.+++|++|||+||+.+.++.++.+.+.++|++|+++||+|++.++..|+++|+||+++++++++++|+
T Consensus 86 ~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~~im~gg~~e~~~~v~~ll~ 165 (497)
T 2p4q_A 86 APVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGPSLMPGGSEEAWPHIKNIFQ 165 (497)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCCeEEecCCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999888888999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhHhhhc
Q 011931 165 KVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLTNEELQNVFTEWNKGELLSFLIEITA 243 (474)
Q Consensus 165 ~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~-~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~ 243 (474)
.++.+. +++||+.++|+.|+|+++||++|++.++++++++|++.++++ .| ++++++.+++..|+.+.+.||+++++.
T Consensus 166 ~~g~~~-dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lG-l~~~~~~~~~~~w~~g~~~S~l~~~~~ 243 (497)
T 2p4q_A 166 SISAKS-DGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGG-FTDKEISDVFAKWNNGVLDSFLVEITR 243 (497)
T ss_dssp HHSCEE-TTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHTTTTCBHHHHHHH
T ss_pred HhcCcc-CCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHHhcCCccccHHHHHHH
Confidence 999875 577899999999999999999999999999999999999999 58 999999999999999999999999998
Q ss_pred ccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH-------------HHHHHHHHhccCCCCCCCCCCc
Q 011931 244 DIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI-------------EERVEAAKVFKSGGFGVQSNQA 310 (474)
Q Consensus 244 ~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~-------------~~r~~~~~~~~~~~~~~~~~~~ 310 (474)
+++..+| ++++|.++.++|.++|||||+|+++.|.++|+|+|++ ++|..+++++.+|... ....
T Consensus 244 ~~l~~~d-~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~~P~~~~av~ar~~s~~k~~r~~~~~~~~gp~~~--~~~~ 320 (497)
T 2p4q_A 244 DILKFDD-VDGKPLVEKIMDTAGQKGTGKWTAINALDLGMPVTLIGEAVFARCLSALKNERIRASKVLPGPEVP--KDAV 320 (497)
T ss_dssp HHHTCBC-TTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC--TTSC
T ss_pred HHHhcCC-CCCccHHHHHHHhhccchHHHHHHHHHHHcCCCCchHHHHHHHHHhhcchhhHHHHhhhcCCCCcc--cccc
Confidence 8877655 6667999999999999999999999999999999999 6788999999877420 0123
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccCh
Q 011931 311 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 390 (474)
Q Consensus 311 ~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~~ 390 (474)
.+++||+|||||||||++|++|+|||+||++++++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+|||+||
T Consensus 321 ~~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~~~ 400 (497)
T 2p4q_A 321 KDREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMWRGGCIIRSVFLGQITKAYREEPDLENLLFNK 400 (497)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHSSSTTCBHHHHHHHHHHHHCTTCSCGGGSH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCchHHHHHHHHHHHHhcCCChhhhhcCH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhHHHHHHhhccCCccceec--------cCCCccc
Q 011931 391 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERI--------DMEGSFH 462 (474)
Q Consensus 391 ~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~~~~~~~~~~~i~a~rd~fG~h~~~r~--------d~~~~~h 462 (474)
.|...+++...+|||||+.|++.|+|+|++++||+||++||++++|+|||||||||||+|||+|+ |++|.||
T Consensus 401 ~f~~~~~~~~~~~r~~v~~a~~~gvp~P~~s~aL~~~~~~~~~~~~a~liqa~Rd~FG~H~~~r~~~~~~~~~~~~~~~h 480 (497)
T 2p4q_A 401 FFADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYDGYRSERLPANLLQAQRDYFGAHTFRVLPECASDNLPVDKDIH 480 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTHHHHHHHHHHHSCCCBCCCGGGCCSSSCTTSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchhHHHHHHHHhcCCcceeeccccccccCCCCCeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccccCCCCCC
Q 011931 463 TEWFKIAKQSK 473 (474)
Q Consensus 463 ~~w~~~~~~~~ 473 (474)
++|++++.+++
T Consensus 481 ~~w~~~~~~~~ 491 (497)
T 2p4q_A 481 INWTGHGGNVS 491 (497)
T ss_dssp CCCC-------
T ss_pred cccCCCCCccc
Confidence 99976555443
No 3
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=100.00 E-value=4.3e-100 Score=799.37 Aligned_cols=453 Identities=52% Similarity=0.899 Sum_probs=420.8
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
++++|||||+|.||++||.+|+++|++|++|||++++++++.+..... ++..+.+++++++.|+++|+||+|||++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~---gi~~~~s~~e~v~~l~~aDvVil~Vp~~~ 90 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGK---KLVPYYTVKEFVESLETPRRILLMVKAGA 90 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTS---CEEECSSHHHHHHTBCSSCEEEECSCSSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCC---CeEEeCCHHHHHhCCCCCCEEEEECCCHH
Confidence 456899999999999999999999999999999999999887752101 26678899999987777999999999987
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccccCCCHHHHHHHHHHHHH
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLK 165 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~ 165 (474)
+++++++++.+.+++|++|||++|+.+.++.++.+.+.++|++|+++|++|++.+++.|+++|+||++++++.++++|+.
T Consensus 91 ~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~ 170 (480)
T 2zyd_A 91 GTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTK 170 (480)
T ss_dssp HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCCeEEecCCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999988988888889999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhHhhhcc
Q 011931 166 VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLTNEELQNVFTEWNKGELLSFLIEITAD 244 (474)
Q Consensus 166 lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~-~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~ 244 (474)
++.+..+++||+.++|+.|+|+++||++|++.++++++++|++.++++ .| ++++++.+++..|+.+.+.|++++++.+
T Consensus 171 ~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lG-l~~~~~~~l~~~w~~g~~~s~l~~~~~~ 249 (480)
T 2zyd_A 171 IAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLN-LTNEELAQTFTEWNNGELSSYLIDITKD 249 (480)
T ss_dssp HSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHTTTCBHHHHHHHH
T ss_pred HhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHhcCCCcccHHHHHHHH
Confidence 998754689999999999999999999999999999999999999999 69 9999999999999999999999999999
Q ss_pred cccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH-------------HHHHHHHHhccCCCCCCCCCCcc
Q 011931 245 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI-------------EERVEAAKVFKSGGFGVQSNQAV 311 (474)
Q Consensus 245 ~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~-------------~~r~~~~~~~~~~~~~~~~~~~~ 311 (474)
+++.+| +++++.++.++|.+.||+||+|+.+.|.++|+|+|++ ++|..+++++.+|.. ....
T Consensus 250 ~l~~~d-~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv~~Pi~~~av~ar~~s~~k~~R~~~~~~~~g~~~----~~~~ 324 (480)
T 2zyd_A 250 IFTKKD-EDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQA----QPAG 324 (480)
T ss_dssp HHHCBC-TTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTCCCHHHHHHHHHHHHHTCHHHHHHHHTTCCCCCC----CCCC
T ss_pred HHhcCC-CCCcchHHHHHHHhcCchHHHHHHHHHHHcCCCCchHHHHHHHHhhhcchhhhHHhhcccCCCCC----CCCC
Confidence 887655 6667999999988899999999999999999999999 678888888887742 1234
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccChH
Q 011931 312 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPE 391 (474)
Q Consensus 312 ~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~~~ 391 (474)
+++||+|||||||||++|++|+|||+||+++|++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+|||+||.
T Consensus 325 ~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~~~~ 404 (480)
T 2zyd_A 325 DKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDACAENPQIANLLLAPY 404 (480)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSSTTCBTHHHHHHHHHHHCTTCSCGGGSHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChHhhhcCHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhHHHHHHhhccCCccceeccCCCcccccccc
Q 011931 392 FAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERIDMEGSFHTEWFK 467 (474)
Q Consensus 392 ~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~~~~~~~~~~~i~a~rd~fG~h~~~r~d~~~~~h~~w~~ 467 (474)
|.+.+++...+|||||+.|++.|+|+|++++||+||++||++++|+|||||||||||+|||+|+|++|.||++|++
T Consensus 405 f~~~~~~~~~~~r~~v~~a~~~gvp~p~~s~al~~~~~~~~~~~~~~l~qa~Rd~FG~H~~~r~~~~~~~h~~w~~ 480 (480)
T 2zyd_A 405 FKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWLD 480 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTHHHHHHHHHHHHCCCBCBSSSCSCBCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchhhHHHHHHHhcCCCcceecCCCCcccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999963
No 4
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=100.00 E-value=3.2e-98 Score=786.01 Aligned_cols=453 Identities=51% Similarity=0.900 Sum_probs=418.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
+++|||||+|.||.+||.+|+++|++|++|||++++++++.+..... ++..+.+++++++.++++|+||+|||++.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~---gi~~~~s~~e~v~~l~~aDvVilavp~~~~ 81 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDK---NLVFTKTLEEFVGSLEKPRRIMLMVQAGAA 81 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTS---CEEECSSHHHHHHTBCSSCEEEECCCTTHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCC---CeEEeCCHHHHHhhccCCCEEEEEccCchH
Confidence 46899999999999999999999999999999999999887653111 256788999998877779999999999888
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccccCCCHHHHHHHHHHHHHH
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKV 166 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~l 166 (474)
++.+++++.+.+++|++|||++|+.+.++.++.+.+.+.|++|+++|++|++..+..|+++|+||+++.++.++++|+.+
T Consensus 82 v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~~ 161 (474)
T 2iz1_A 82 TDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMPGGQKEAYDLVAPIFEQI 161 (474)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCCCEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCCeEEecCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888888877899999999999999999999888999999999999999999
Q ss_pred hccCC-CCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHhhccCcchhhhHhhhcc
Q 011931 167 AAQVP-DSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKS-VGKLTNEELQNVFTEWNKGELLSFLIEITAD 244 (474)
Q Consensus 167 g~~~~-~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~-~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~ 244 (474)
+.++. +++||+.++|+.|+|+++||++|++.++.+++++|++.++++ .| ++++++.+++..|+.+.+.||+++++.+
T Consensus 162 g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~G-l~~~~~~~l~~~w~~g~~~s~l~~~~~~ 240 (474)
T 2iz1_A 162 AAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILG-LSNAEIQAIFEEWNEGELDSYLIEITKE 240 (474)
T ss_dssp SCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHTTTTTCBHHHHHHHH
T ss_pred hcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHhcCCCccccHHHhhhh
Confidence 98742 578999999999999999999999999999999999999999 68 9999999999999999999999999998
Q ss_pred cccccccCCCc-chHHHHhhhcCCCccHHHHHHHHHHcCCCcccH-------------HHHHHHHHhccCCCCCCCCCCc
Q 011931 245 IFGIKDDKGDG-YLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI-------------EERVEAAKVFKSGGFGVQSNQA 310 (474)
Q Consensus 245 ~l~~~~~~~~~-~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~-------------~~r~~~~~~~~~~~~~~~~~~~ 310 (474)
++..+| +.++ +.++.++|.+.||+||+|+.+.|.++|+|+|++ ++|..+++.+.+|.. ...
T Consensus 241 ~l~~~d-~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~gv~~P~~~~av~ar~~s~~k~~r~~~~~~~~g~~~----~~~ 315 (474)
T 2iz1_A 241 VLKRKD-DEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYKDERVKASKVLSGPAL----DFS 315 (474)
T ss_dssp HTTCBC-SSSSSBGGGGBCSCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC----CCC
T ss_pred HhhcCC-CCCChhHHHHHHHhhcccchHHHHHHHHHHcCCCCchHHHHHHHHHhhhhhhhhHHhhhccCCCCC----cCC
Confidence 876655 5555 999999998899999999999999999999999 679999999987742 123
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccCh
Q 011931 311 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 390 (474)
Q Consensus 311 ~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~~ 390 (474)
.+++||+|||||||||++|++|+|||+||+++|++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+|||+||
T Consensus 316 ~~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l~~~~ 395 (474)
T 2iz1_A 316 GDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDD 395 (474)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSCTTCBTTHHHHHHHHHHCTTCCCGGGSH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHhcCCChhhhhcCH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhHHHHHHhhccCCccceeccCCCccccccccC
Q 011931 391 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERIDMEGSFHTEWFKI 468 (474)
Q Consensus 391 ~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~~~~~~~~~~~i~a~rd~fG~h~~~r~d~~~~~h~~w~~~ 468 (474)
.|.+.+++.+++|||+|+.|++.|+|+|++++||+||++||++++|+|||||||||||+|||+|+|++|.||++|+++
T Consensus 396 ~~~~~~~~~~~~~r~~v~~a~~~~~p~p~~s~al~~~~~~~~~~~~~~l~qa~rd~fg~h~~~r~~~~~~~h~~w~~~ 473 (474)
T 2iz1_A 396 YFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYRSENLPANLIQAQRDYFGAHTYERTDKAGIFHYDWYTE 473 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTHHHHHHHHHHHHCCCBCBSSSSSCBCCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchhhHHHHHHHhcCCccceecCCCCeeeccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999863
No 5
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=100.00 E-value=1.9e-97 Score=781.75 Aligned_cols=458 Identities=49% Similarity=0.840 Sum_probs=420.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHH-hhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE-RAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
|+|||||+|.||.+||.+|+++||+|++|||++++++++.+ ... +.++..+.+++++++.++.+|+||+|||++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~---g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~ 79 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK---GTKVLGAHSLEEMVSKLKKPRRIILLVKAGQA 79 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTT---TSSCEECSSHHHHHHHBCSSCEEEECSCTTHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcccc---CCCeEEeCCHHHHHhhccCCCEEEEeCCChHH
Confidence 68999999999999999999999999999999999998876 210 01366788999998755559999999999878
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccccCCCHHHHHHHHHHHHHH
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKV 166 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~l 166 (474)
++.+++++.+.+.+|++|||++|+.+.++.++.+.+.+.|++|+++|++|++.++..|+++++||+++.++.++++|+.+
T Consensus 80 v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~~i~~gg~~e~~~~v~~ll~~~ 159 (482)
T 2pgd_A 80 VDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGI 159 (482)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEECTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCCeEEeCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888888888888899999999999999999999889999999999999999999
Q ss_pred hccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHhhccCcchhhhHhhhccc
Q 011931 167 AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV-GKLTNEELQNVFTEWNKGELLSFLIEITADI 245 (474)
Q Consensus 167 g~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~-G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 245 (474)
+.++.+++||+.++|+.|+|+++||++|++.++.+++++|++.++++. | ++++++.+++..|+.+.+.|++++++.++
T Consensus 160 g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G-~~~~~~~~~~~~w~~g~~~S~l~~~~~~~ 238 (482)
T 2pgd_A 160 AAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLG-LGHKEMAKAFEEWNKTELDSFLIEITASI 238 (482)
T ss_dssp SCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHTTTTTCBHHHHHHHHH
T ss_pred hhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cCHHHHHHHHHHhcCCCcCchHHHHHhHH
Confidence 988645789999999999999999999999999999999999999999 8 99999999999999999999999999887
Q ss_pred ccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH-------------HHHHHHHHhccCCCCCCCCCCccc
Q 011931 246 FGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI-------------EERVEAAKVFKSGGFGVQSNQAVD 312 (474)
Q Consensus 246 l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~-------------~~r~~~~~~~~~~~~~~~~~~~~~ 312 (474)
+..++ +++++.++.+++..+||+||+|+++.|+++|+|+|++ ++|..+++.+.+|... ....+
T Consensus 239 l~~~d-~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~~P~i~~av~~~~~s~~k~~r~~~~~~~~g~~~~---~~~~~ 314 (482)
T 2pgd_A 239 LKFQD-ADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQNI---PFEGD 314 (482)
T ss_dssp HHCBC-TTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC---CCCSC
T ss_pred hhccC-CCCCeeecccccccccccHHHHHHHHHHHcCCCcchHHHHHHHHhhhhhhhHHHHHhhhcCCCCcc---ccCcC
Confidence 77654 6777999999999999999999999999999999999 5798999999877421 12357
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccChHH
Q 011931 313 KQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEF 392 (474)
Q Consensus 313 ~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~~~~ 392 (474)
.+||+|||||||||++|++|+|||+||+++|++|+|++|+.+|+++||+||||||+||+.|.++|+++|+|+||++|+.|
T Consensus 315 ~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l~~~~~~ 394 (482)
T 2pgd_A 315 KKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFF 394 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTTSSSTTCBTHHHHHHHHHHHCTTCSCGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChhhhhcCHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHhhcCCCchhHHHHHHhhccCCccceeccCCC-ccccccccCCCC
Q 011931 393 AKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERIDMEG-SFHTEWFKIAKQ 471 (474)
Q Consensus 393 ~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~~~~~~~~~~~i~a~rd~fG~h~~~r~d~~~-~~h~~w~~~~~~ 471 (474)
.+.+++.+++|||+|+.|++.|+|+|++++||+||++|+++++|+|||||||||||+|||+|+|++| .||++|++++.+
T Consensus 395 ~~~~~~~~~~~r~~v~~a~~~g~p~p~~s~al~~~~~~~~~~~~~~l~qa~rd~fG~h~~~r~~~~~~~~h~~w~~~~~~ 474 (482)
T 2pgd_A 395 KSAVENCQDSWRRAISTGVQAGIPMPCFTTALSFYDGYRHAMLPANLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGGS 474 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCSSCTHHHHHHHHHHHHCCCBCCSSSTTCCBCCCCSCSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCcchhHHHHHHhhcCCceeeecCCCCCceecccCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999765554
Q ss_pred CC
Q 011931 472 SK 473 (474)
Q Consensus 472 ~~ 473 (474)
++
T Consensus 475 ~~ 476 (482)
T 2pgd_A 475 VS 476 (482)
T ss_dssp --
T ss_pred cc
Confidence 43
No 6
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=1.3e-94 Score=758.59 Aligned_cols=450 Identities=37% Similarity=0.652 Sum_probs=414.0
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh----hcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK----KEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~----~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
|+|||||+|.||.+||.+|+++|++|++|||++++++++.+... .. ++..+.+++++++.++++|+||+|||+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~---~i~~~~~~~e~v~~l~~aDvVilaVp~ 78 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAG---NLKAFETMEAFAASLKKPRKALILVQA 78 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGG---GEEECSCHHHHHHHBCSSCEEEECCCC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCC---CeEEECCHHHHHhcccCCCEEEEecCC
Confidence 58999999999999999999999999999999999998887521 00 256778999999866679999999999
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccccCCCHHHHHHHHHHH
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDIL 163 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll 163 (474)
+.+++.+++++.+.+.+|++|||++|+.+.++.++.+.+.+.|++|+++|++|++.++..|+++++||+++.++.++++|
T Consensus 79 ~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll 158 (478)
T 1pgj_A 79 GAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGPAFFPGGTLSVWEEIRPIV 158 (478)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCCEEEEEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCCeEeccCCHHHHHHHHHHH
Confidence 87899999999999999999999999999888888888887899999999999999999999888999999999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhc-cCcchhhhHhhh
Q 011931 164 LKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWN-KGELLSFLIEIT 242 (474)
Q Consensus 164 ~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~-~~~~~s~~~~~~ 242 (474)
+.++.+..+++||+.++|+.|+|+++|+++|++.++.+++++|++.++++.| ++++++.+++..|+ .+.+.|++++++
T Consensus 159 ~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G-~~~~~~~~l~~~w~~~g~~~s~l~~~~ 237 (478)
T 1pgj_A 159 EAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMG-LNNDEVAAVLEDWKSKNFLKSYMLDIS 237 (478)
T ss_dssp HHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHTSTTCBHHHHHH
T ss_pred HHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHhccCCCcCchHHHhh
Confidence 9999875567899999999999999999999999999999999999999998 99999999999999 888999999999
Q ss_pred cccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH-------------HHHHHHHHhccCCCC-CCCCC
Q 011931 243 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI-------------EERVEAAKVFKSGGF-GVQSN 308 (474)
Q Consensus 243 ~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~-------------~~r~~~~~~~~~~~~-~~~~~ 308 (474)
.+++..+| +.+.+.++.+.|.++|||||+|+++.|+++|+|+|++ ++|..+++++++|.. . .
T Consensus 238 ~~~l~~~d-~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~~Pi~~~av~~r~ls~~~~~r~~~~~~l~~~~~~~---~ 313 (478)
T 1pgj_A 238 IAAARAKD-KDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVPAPSLNMAVVSRQFTMYKTERQANASNAPGITQSP---G 313 (478)
T ss_dssp HHHHHCBC-TTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTHHHHHHHHHHSTTTTCCC---C
T ss_pred chhhhcCC-CCChhHHHHHHHHhcCccHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCCHHHHHHHhcCCCCccc---c
Confidence 88876554 5334899999999999999999999999999999999 568888899887742 1 1
Q ss_pred Cc-cch---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCC
Q 011931 309 QA-VDK---QKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLA 384 (474)
Q Consensus 309 ~~-~~~---~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~ 384 (474)
.. .+. ..|+++|++|+|++++++|+|||+||+++|++|+|+||+.+|++|||+||||||.||+.|.++|+++|++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~al~~~~~~~yaqg~~~~~~a~~~~~w~l~~~~~a~~wr~gciir~~~l~~i~~a~~~~~~~~ 393 (478)
T 1pgj_A 314 YTLKNKSPSGPEIKQLYDSVCIAIISCYAQMFQCLREMDKVHNFGLNLPATIATFRAGCILQGYLLKPMTEAFEKNPNIS 393 (478)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHTTSSSSTTCBTTHHHHHHHHHHCTTCS
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHcCCceeeHHHHHHHHHHHhcCCChh
Confidence 12 344 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccChHHHHHHHhhhhhHHHHHHH-HHHcCCChHHHHHHHHHHHhhcCCCch-hHHHHHHhhccCCccceeccCCCccc
Q 011931 385 NLLVDPEFAKEIVDRQSAWRRVVCL-AINSGISTPGMSSSLAYFDSYRRERLP-ANLVQAQRDYFGAHTYERIDMEGSFH 462 (474)
Q Consensus 385 ~ll~~~~~~~~~~~~~~~~~~~v~~-a~~~gip~p~~~~al~y~~~~~~~~~~-~~~i~a~rd~fG~h~~~r~d~~~~~h 462 (474)
||| +.|.+++++.+.+||++|.. |++.|+|+|++|+||+|||+||+++|| +|||||||||||+|||+|+|++|.||
T Consensus 394 ~l~--~~~~~~~~~~~~~~r~~v~~~~~~~g~~~p~~~~~l~y~d~~~~~~l~~~~l~qaqrd~fg~h~~~~~~~~~~~h 471 (478)
T 1pgj_A 394 NLM--CAFQTEIRAGLQNYRDMVALITSKLEVSIPVLSASLNYVTAMFTPTLKYGQLVSLQRDVFGRHGYERVDKDGRES 471 (478)
T ss_dssp CTT--GGGHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTCSCCTHHHHHHHHHHHHHCCCEEBSSSSSEEC
T ss_pred hHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhccccCCcchhHHHHHHhccCceeeecCCCCcee
Confidence 999 99999999999999999999 999999999999999999999999999 99999999999999999999999999
Q ss_pred ccccc
Q 011931 463 TEWFK 467 (474)
Q Consensus 463 ~~w~~ 467 (474)
++|++
T Consensus 472 ~~w~~ 476 (478)
T 1pgj_A 472 FQWPE 476 (478)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 99975
No 7
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=100.00 E-value=1.3e-52 Score=423.76 Aligned_cols=320 Identities=30% Similarity=0.481 Sum_probs=262.2
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
|+|||||+|.||.+||.+|+++||+|++|||++++++++.+.+ +..+.+++++++..+.+|+||+|||++ ++
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g-------~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v 94 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREG-------IAGARSIEEFCAKLVKPRVVWLMVPAA-VV 94 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CBCCSSHHHHHHHSCSSCEEEECSCGG-GH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------CEEeCCHHHHHhcCCCCCEEEEeCCHH-HH
Confidence 7899999999999999999999999999999999998887643 567889999999833349999999998 89
Q ss_pred HHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccccCCCHHHHHHHHHHHHHHh
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVA 167 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~lg 167 (474)
+++++++.+.++++++|||+||+.|.+++++.+.+.++|++|+++||+|++.+++.|+++|+||+++++++++++|+.++
T Consensus 95 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~~im~GG~~~a~~~~~~ll~~lg 174 (358)
T 4e21_A 95 DSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGYCLMIGGEKQAVERLDPVFRTLA 174 (358)
T ss_dssp HHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCCEEEEESCHHHHHHTHHHHHHHS
T ss_pred HHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCCeeeecCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCC-------------CCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcc
Q 011931 168 AQVPDS-------------GPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGEL 234 (474)
Q Consensus 168 ~~~~~~-------------~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~ 234 (474)
.+.... +++++++|+.|+|+++|+++|.+.++.+++++|++.++++.| +...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~-~~~~-------------- 239 (358)
T 4e21_A 175 PGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHAN-AGKE-------------- 239 (358)
T ss_dssp CCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CC----------------
T ss_pred cccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccc--------------
Confidence 532100 146899999999999999999999999999999999999886 3211
Q ss_pred hhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHHHHHHHHHhccCCCCCCCCCCccchh
Q 011931 235 LSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIEERVEAAKVFKSGGFGVQSNQAVDKQ 314 (474)
Q Consensus 235 ~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 314 (474)
.. . . +++ .+ | .
T Consensus 240 -----------~~--~-------~-----~~~----------~~-------~---------------~------------ 250 (358)
T 4e21_A 240 -----------GQ--G-------A-----DAE----------TA-------P---------------L------------ 250 (358)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------cc--c-------c-----ccc----------cc-------c---------------c------------
Confidence 00 0 0 000 00 0 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccChHHHH
Q 011931 315 KLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEFAK 394 (474)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~~~~~~ 394 (474)
+.+++|+|++|+.+|+++||+||+|+|+||+.+.++|+++|.++++. ..+.+
T Consensus 251 --------------------------~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~~p~~~~~~--~~~~d 302 (358)
T 4e21_A 251 --------------------------RNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALLDSPDLQEFQ--GRVSD 302 (358)
T ss_dssp ---------------------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHHHCTTCTTC----CCCC
T ss_pred --------------------------ccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHhhCCChHHHH--HHHHh
Confidence 01688999999999999999999999999999999999988765432 22221
Q ss_pred HHHhhhhhHHHHHHHHHHcCCChHHHHHHHH-HHHhhcCCCchh-HHHHHHhhccCCccce
Q 011931 395 EIVDRQSAWRRVVCLAINSGISTPGMSSSLA-YFDSYRRERLPA-NLVQAQRDYFGAHTYE 453 (474)
Q Consensus 395 ~~~~~~~~~~~~v~~a~~~gip~p~~~~al~-y~~~~~~~~~~~-~~i~a~rd~fG~h~~~ 453 (474)
+++ +||+|..|.+.|+|+|++++||. ||.+ +.+++++ |++||||||||+|+++
T Consensus 303 ---~g~--~r~~~~~A~~~gvp~p~~~~al~~~~~s-~~~~~~~~~l~~a~r~~fG~h~~~ 357 (358)
T 4e21_A 303 ---SGE--GRWTVAAAIDEGVPAHVLSSALYERFSS-RGEDDFANRLLSAMRYEFGGHREK 357 (358)
T ss_dssp ---CSH--HHHHHHHHHHHTCCCHHHHHHHHHHHHH-TTTTHHHHHHHHHHC---------
T ss_pred ---cCc--HHHHHHHHHHcCCChHHHHHHHHHHHHH-CCCcccHHHHHHHHHHhcCCCCCC
Confidence 334 49999999999999999999996 6776 7778874 7999999999999975
No 8
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=1.9e-46 Score=370.31 Aligned_cols=256 Identities=22% Similarity=0.296 Sum_probs=234.9
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.|+||||||+|.||.+||++|+++||+|++|||++++++.+.+.+ .+.+.|++|+++. +|+||+|+|+++
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~G-------a~~a~s~~e~~~~---~dvv~~~l~~~~ 71 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------ASAARSARDAVQG---ADVVISMLPASQ 71 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CEECSSHHHHHTT---CSEEEECCSCHH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcC-------CEEcCCHHHHHhc---CCceeecCCchH
Confidence 367899999999999999999999999999999999999998765 5688999999998 999999999999
Q ss_pred hHHHHHH---HHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHH
Q 011931 86 PVDETIK---TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIED 161 (474)
Q Consensus 86 ~v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ 161 (474)
++++|+. .+.+.+.+|++|||+||+.|.+++++.+.++++|++|+|+||+||+.+|+.|+ ++|+||+++++++++|
T Consensus 72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p 151 (300)
T 3obb_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARP 151 (300)
T ss_dssp HHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHH
Confidence 9999985 37788999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhh
Q 011931 162 ILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEI 241 (474)
Q Consensus 162 ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~ 241 (474)
+|+.++.+ ++|+|+.|+|+.+|+++|.+.++.+++++|++.++++.| +|++.+.+++ +.+...||.++.
T Consensus 152 ~l~~~g~~-------i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~G-ld~~~~~~vl---~~~~~~s~~~~~ 220 (300)
T 3obb_A 152 LFEAMGRN-------IFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANG-LEAKVLAEIM---RRSSGGNWALEV 220 (300)
T ss_dssp HHHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HTSTTCCHHHHH
T ss_pred HHHHhCCC-------EEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHH---HhCcccchHHHh
Confidence 99999987 699999999999999999999999999999999999999 9999999987 567778898887
Q ss_pred hcccc------cccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH
Q 011931 242 TADIF------GIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (474)
Q Consensus 242 ~~~~l------~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~ 288 (474)
+.+.. ...++|.++|.++.+.||++ ++.+.|++.|+|+|+.
T Consensus 221 ~~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~------l~~~~A~~~g~~~p~~ 267 (300)
T 3obb_A 221 YNPWPGVMENAPASRDYSGGFMAQLMAKDLG------LAQEAAQASASSTPMG 267 (300)
T ss_dssp CCCSTTTSTTSGGGGTTCSSSBHHHHHHHHH------HHHHHHHHHTCCCHHH
T ss_pred hccccchhhhccccccCCccchHHHHHHHHH------HHHHHHHHcCCCChHH
Confidence 76532 11245789999999999998 8999999999999988
No 9
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=1.3e-44 Score=357.12 Aligned_cols=256 Identities=16% Similarity=0.234 Sum_probs=228.1
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
.|..||||||+|.||.+||++|+++||+|++|||++++++++.+.+ ...+.++.|+++. +|+||+|+|++
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G-------~~~~~s~~e~~~~---~dvvi~~l~~~ 72 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLG-------ATVVENAIDAITP---GGIVFSVLADD 72 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTT-------CEECSSGGGGCCT---TCEEEECCSSH
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC-------CeEeCCHHHHHhc---CCceeeeccch
Confidence 3445899999999999999999999999999999999998887654 5678899999988 99999999999
Q ss_pred hhHHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHH
Q 011931 85 APVDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (474)
Q Consensus 85 ~~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (474)
.++++++ ..+.+.+.++++|||+||+.|.+++++.+.+.++|++|+|+||+|++.++..|+ ++|+||+++++++++++
T Consensus 73 ~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~ 152 (297)
T 4gbj_A 73 AAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPI 152 (297)
T ss_dssp HHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeecccchhHHHHHHHH
Confidence 8888776 568888999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHhccCCCCCCceEEeC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhh
Q 011931 163 LLKVAAQVPDSGPCVTYVS-KGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEI 241 (474)
Q Consensus 163 l~~lg~~~~~~~~~~~~~g-~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~ 241 (474)
|+.++.+ ++|+| +.|+|+++|+++|.+.++.+++++|++.++++.| +|++++.+++ +.+.+.||+++.
T Consensus 153 l~~~g~~-------i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~G-ld~~~~~~~l---~~~~~~s~~~~~ 221 (297)
T 4gbj_A 153 VENFVKG-------VFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNG-ISRQSIYEML---TSTLFAAPIFQN 221 (297)
T ss_dssp HHTTCSE-------EEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HTTTTCSHHHHH
T ss_pred HHHhhCC-------eEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HhhcccCchhhc
Confidence 9999976 58888 5899999999999999999999999999999999 9999999987 678888999999
Q ss_pred hcccccccccCCC-cchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH
Q 011931 242 TADIFGIKDDKGD-GYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (474)
Q Consensus 242 ~~~~l~~~~~~~~-~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~ 288 (474)
+.+.+..++ |.| +|.++.+.||++ ++.+.|++.|+|+|+.
T Consensus 222 ~~~~~~~~~-~~p~~f~~~l~~KDl~------l~~~~A~~~g~~~p~~ 262 (297)
T 4gbj_A 222 YGKLVASNT-YEPVAFRFPLGLKDIN------LTLQTASDVNAPMPFA 262 (297)
T ss_dssp HHHHHHHTC-CCSCSSBHHHHHHHHH------HHHHHHHHTTCCCHHH
T ss_pred cCccccCCC-CCCccchhHHHHHHHH------HHHHHHHHhCCCChHH
Confidence 888776644 665 799999999998 8999999999999998
No 10
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=5.6e-38 Score=312.00 Aligned_cols=258 Identities=19% Similarity=0.295 Sum_probs=235.4
Q ss_pred CCCcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 4 GKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 4 ~~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
...||||||||+|.||.+||.+|+++||+|++|||++++++++.+.+ +..+++++++++. +|+||+|||+
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~~~~~~~~~~~~---aDvvi~~vp~ 87 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHG-------ASVCESPAEVIKK---CKYTIAMLSD 87 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------CEECSSHHHHHHH---CSEEEECCSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CeEcCCHHHHHHh---CCEEEEEcCC
Confidence 34578999999999999999999999999999999999999887643 5678899999998 9999999999
Q ss_pred ChhHHHHH---HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHH
Q 011931 84 GAPVDETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYI 159 (474)
Q Consensus 84 ~~~v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v 159 (474)
+.+++.++ +++.+.+.++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||++++++++
T Consensus 88 ~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~ 167 (310)
T 3doj_A 88 PCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEES 167 (310)
T ss_dssp HHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHH
T ss_pred HHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHH
Confidence 87899998 788888999999999999999999999999989999999999999999999999 79999999999999
Q ss_pred HHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhH
Q 011931 160 EDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLI 239 (474)
Q Consensus 160 ~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~ 239 (474)
+++|+.++.+ ++++|+.|.|+++|+++|.+.+..+++++|++.++++.| ++++++.+++ +.+...|+++
T Consensus 168 ~~ll~~~g~~-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~d~~~~~~~~---~~~~~~s~~~ 236 (310)
T 3doj_A 168 IPAFDVLGKR-------SFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSG-LSSDTLLDIL---DLGAMTNPMF 236 (310)
T ss_dssp HHHHHHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SCHHHHHHHH---HHSTTCCHHH
T ss_pred HHHHHHhCCC-------EEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HhcccccHHH
Confidence 9999999976 589999999999999999999999999999999999999 9999999998 4567778888
Q ss_pred hhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 240 EITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
+.+.+.+..+ +|.++|.++...||++ .+++.|+++|+|+|+++
T Consensus 237 ~~~~~~~~~~-~~~~~f~~~~~~KDl~------~~~~~a~~~g~~~p~~~ 279 (310)
T 3doj_A 237 KGKGPSMNKS-SYPPAFPLKHQQKDMR------LALALGDENAVSMPVAA 279 (310)
T ss_dssp HHHHHHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHH
T ss_pred HHHhhhhhcC-CCCCCccHHHHHHHHH------HHHHHHHHcCCCChHHH
Confidence 8877666553 4788999999999997 89999999999999983
No 11
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=7.3e-38 Score=312.53 Aligned_cols=254 Identities=20% Similarity=0.275 Sum_probs=233.6
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.+|||||||+|.||..||.+|+++|++|++|||++++.+++.+.+ +..+++++++++. +|+||+|||++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~~~~~~~e~~~~---aDvVi~~vp~~~ 99 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALG-------ATIHEQARAAARD---ADIVVSMLENGA 99 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CEEESSHHHHHTT---CSEEEECCSSHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC-------CEeeCCHHHHHhc---CCEEEEECCCHH
Confidence 457999999999999999999999999999999999998887653 5678899999988 999999999887
Q ss_pred hHHHHHH--HHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHH
Q 011931 86 PVDETIK--TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (474)
Q Consensus 86 ~v~~vl~--~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (474)
+++.++. ++.+.+.++++|||+||+.|.+++++.+.+.++|++|+++|++|++.++..|+ .+++||+++++++++++
T Consensus 100 ~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~l 179 (320)
T 4dll_A 100 VVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPL 179 (320)
T ss_dssp HHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHH
Confidence 8999987 88888999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhh
Q 011931 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEIT 242 (474)
Q Consensus 163 l~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~ 242 (474)
|+.+ .+ ++++|+.|+|+++|+++|.+.+..+++++|++.++++.| ++++++.+++ +.+.+.||+++.+
T Consensus 180 l~~~-~~-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~d~~~~~~~~---~~~~~~s~~~~~~ 247 (320)
T 4dll_A 180 LKVF-GR-------ATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGG-ADMAKVKEAI---TGGFADSRVLQLH 247 (320)
T ss_dssp HHHH-EE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-CCHHHHHHHH---TTSTTCBHHHHTH
T ss_pred HHhc-CC-------EEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HcccccCHHHHHh
Confidence 9999 66 588999999999999999999999999999999999999 9999999987 5667789999888
Q ss_pred cccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH
Q 011931 243 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (474)
Q Consensus 243 ~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~ 288 (474)
.+.+..+ +|.++|.++...||++ ++++.|+++|+|+|++
T Consensus 248 ~~~~l~~-~~~~gf~~~~~~KDl~------~~~~~a~~~g~~~p~~ 286 (320)
T 4dll_A 248 GQRMVER-DFAPRARLSIQLKDMR------NALATAQEIGFDAPIT 286 (320)
T ss_dssp HHHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHH
T ss_pred hhhhccC-CCCCcccHHHHHHHHH------HHHHHHHHcCCCChHH
Confidence 7766654 4788999999999998 8999999999999998
No 12
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.2e-37 Score=306.38 Aligned_cols=255 Identities=18% Similarity=0.241 Sum_probs=233.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
|+||||||+|.||.+||.+|+++||+|++|||++++.+++.+.+ +..+++++++++. +|+||+|||++.+
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~~~~~---advvi~~v~~~~~ 70 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALG-------ARQASSPAEVCAA---CDITIAMLADPAA 70 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHT-------CEECSCHHHHHHH---CSEEEECCSSHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------CeecCCHHHHHHc---CCEEEEEcCCHHH
Confidence 57899999999999999999999999999999999999887754 5678899999988 9999999999878
Q ss_pred HHHHH---HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHH
Q 011931 87 VDETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (474)
Q Consensus 87 v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (474)
++.++ +++.+.+.++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|. .+++||+++.+++++++
T Consensus 71 ~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~l 150 (287)
T 3pdu_A 71 AREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPA 150 (287)
T ss_dssp HHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHH
T ss_pred HHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHH
Confidence 99998 788888999999999999999999999998888999999999999999999999 89999999999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhh
Q 011931 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEIT 242 (474)
Q Consensus 163 l~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~ 242 (474)
|+.++.+ ++++|+.|.|+++|+++|.+.+.++++++|++.++++.| ++++++.+++. .+...|++++..
T Consensus 151 l~~~g~~-------~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~~---~~~~~s~~~~~~ 219 (287)
T 3pdu_A 151 FAALGKK-------CLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCG-LDGGQLLEVLD---AGAMANPMFKGK 219 (287)
T ss_dssp HHHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---HSTTCCHHHHHH
T ss_pred HHHhCCC-------EEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hccccChHHHhh
Confidence 9999976 589999999999999999999999999999999999999 99999999984 566778888887
Q ss_pred cccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 243 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 243 ~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
.+.+..+ +|.++|.++...||++ ++.+.|+++|+|+|+++
T Consensus 220 ~~~~~~~-~~~~~~~~~~~~kd~~------~~~~~a~~~g~~~p~~~ 259 (287)
T 3pdu_A 220 GQMLLSG-EFPTSFPLKHMQKDLR------LAVELGDRLGQPLHGAA 259 (287)
T ss_dssp HHHHHHT-CCCCSSBHHHHHHHHH------HHHHHHHHHTCCCHHHH
T ss_pred ccccccC-CCCCCCcHHHHHHHHH------HHHHHHHHcCCCChHHH
Confidence 7766654 4788999999999987 89999999999999993
No 13
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=2.3e-37 Score=304.22 Aligned_cols=254 Identities=17% Similarity=0.265 Sum_probs=233.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
|||||||+|.||.++|.+|+++||+|++|||++++.+++.+.+ +..+++++++++. +|+||+|||++.++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~~~~~---aDvvi~~vp~~~~~ 71 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALG-------AERAATPCEVVES---CPVTFAMLADPAAA 71 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------CEECSSHHHHHHH---CSEEEECCSSHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------CeecCCHHHHHhc---CCEEEEEcCCHHHH
Confidence 6899999999999999999999999999999999998887653 5678899999988 99999999987789
Q ss_pred HHHH---HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHHH
Q 011931 88 DETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDIL 163 (474)
Q Consensus 88 ~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ll 163 (474)
+.++ +++.+.+.++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++.+++++++|
T Consensus 72 ~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll 151 (287)
T 3pef_A 72 EEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGF 151 (287)
T ss_dssp HHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHH
T ss_pred HHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 9999 888899999999999999999999999999989999999999999999999999 899999999999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhc
Q 011931 164 LKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITA 243 (474)
Q Consensus 164 ~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~ 243 (474)
+.++.+ ++++|+.|.++.+|+++|.+.+..+++++|++.++++.| ++++++.+++ +.+...|++++...
T Consensus 152 ~~~g~~-------~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G-~d~~~~~~~~---~~~~~~s~~~~~~~ 220 (287)
T 3pef_A 152 EKMGKK-------IIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAG-LATDAILDVI---GAGAMANPMFALKG 220 (287)
T ss_dssp HHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HHSTTCCHHHHHHH
T ss_pred HHhCCC-------eEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HhcccccHHHHHHh
Confidence 999976 588999999999999999999999999999999999999 9999999998 45667789888887
Q ss_pred ccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 244 DIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 244 ~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
+.+..+ +|.++|.++...||+. ++++.|+++|+|+|+++
T Consensus 221 ~~~~~~-~~~~~~~~~~~~kd~~------~~~~~a~~~g~~~p~~~ 259 (287)
T 3pef_A 221 GLIRDR-NFAPAFPLKHMQKDLR------LAVALGDRVGQPLVASA 259 (287)
T ss_dssp HHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHHTCCCHHHH
T ss_pred hhhhcC-CCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHH
Confidence 766654 4788999999999987 89999999999999993
No 14
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=2.9e-37 Score=305.93 Aligned_cols=257 Identities=21% Similarity=0.268 Sum_probs=231.1
Q ss_pred CCCcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCCcEEEEecC
Q 011931 4 GKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 4 ~~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~~l~~~dvIil~vp 82 (474)
..++|||||||+|.||.+||.+|+++||+|++|||++++++.+.+.+ ... +++++++++. +|+||+|||
T Consensus 4 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~e~~~~---aDvvi~~vp 73 (303)
T 3g0o_A 4 TGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEG-------ACGAAASAREFAGV---VDALVILVV 73 (303)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CSEEESSSTTTTTT---CSEEEECCS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC-------CccccCCHHHHHhc---CCEEEEECC
Confidence 34567999999999999999999999999999999999999888754 334 7788888887 999999999
Q ss_pred CChhHHHHH---HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHH
Q 011931 83 AGAPVDETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKY 158 (474)
Q Consensus 83 ~~~~v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~ 158 (474)
++..++.++ +++.+.++++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++.+++
T Consensus 74 ~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~ 153 (303)
T 3g0o_A 74 NAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTR 153 (303)
T ss_dssp SHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHTTCEEEEEECCHHHHHH
T ss_pred CHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHH
Confidence 987888888 778888999999999999999999999988888899999999999999999999 8999999999999
Q ss_pred HHHHHHHHhccCCCCCCceEEeCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhh
Q 011931 159 IEDILLKVAAQVPDSGPCVTYVSK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSF 237 (474)
Q Consensus 159 v~~ll~~lg~~~~~~~~~~~~~g~-~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~ 237 (474)
++++|+.++.+ ++++|+ .|+|+.+|+++|.+.+..+++++|++.++++.| ++++++.+++ +.+...|+
T Consensus 154 ~~~ll~~~g~~-------~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~d~~~~~~~~---~~~~~~s~ 222 (303)
T 3g0o_A 154 LKPVLDAVASN-------VYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAG-IPLDVMYDVV---THAAGNSW 222 (303)
T ss_dssp HHHHHHHHEEE-------EEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TTSTTCCH
T ss_pred HHHHHHHHCCC-------EEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HhcccCCH
Confidence 99999999976 588998 899999999999999999999999999999999 9999999997 55677888
Q ss_pred hHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH
Q 011931 238 LIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (474)
Q Consensus 238 ~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~ 288 (474)
+++...+.+..+ +|.++|.++...||++ ++++.|+++|+|+|++
T Consensus 223 ~~~~~~~~~~~~-~~~~~~~~~~~~kD~~------~~~~~a~~~g~~~p~~ 266 (303)
T 3g0o_A 223 MFENRMQHVVDG-DYTPRSAVDIFVKDLG------LVADTAKALRFPLPLA 266 (303)
T ss_dssp HHHHHHHHHHTT-CCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHH
T ss_pred HHHhhhHHHhcC-CCCCCCchHHHHHHHH------HHHHHHHHcCCCChHH
Confidence 888876655543 4788899999999987 8999999999999999
No 15
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=4.3e-37 Score=303.67 Aligned_cols=251 Identities=18% Similarity=0.202 Sum_probs=225.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
+|||||||+|.||.+||.+|+++||+|++|||++++++++.+.+ +..+++++++++ +|+||+|||++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~~~~~----aDvvi~~vp~~~~ 83 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAG-------ATLADSVADVAA----ADLIHITVLDDAQ 83 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTT-------CEECSSHHHHTT----SSEEEECCSSHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CEEcCCHHHHHh----CCEEEEECCChHH
Confidence 35899999999999999999999999999999999998887654 567788998876 8999999998888
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHHHHH
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDILLK 165 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ll~~ 165 (474)
++++++++.+.++++++|||+||+.|.+++++.+.+.++|++|+++|++|++..+..|+ .+++||+++.+++++++|+.
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~ 163 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKH 163 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888899999999999999999999 89999999999999999999
Q ss_pred HhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH------HHHHHhhccCcchhhhH
Q 011931 166 VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEEL------QNVFTEWNKGELLSFLI 239 (474)
Q Consensus 166 lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~------~~~~~~~~~~~~~s~~~ 239 (474)
++.+ ++++|+.|.|+.+|+++|.+.+..+++++|++.++++.| ++++++ .+++ +.+.+.||+.
T Consensus 164 ~g~~-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G-~d~~~~~~~~~~~~~i---~~~~~~s~~~ 232 (296)
T 3qha_A 164 WAAV-------VIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAG-LDLQALGRVVRHTDAL---TGGPGAIMVR 232 (296)
T ss_dssp HEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHH---HCCGGGGCCC
T ss_pred HcCC-------eEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHhhhcchHHHH---hcCcccCHHh
Confidence 9987 589999999999999999999999999999999999999 999999 5554 5667777776
Q ss_pred hhhcccccccccCCCcchH-----HHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 240 EITADIFGIKDDKGDGYLV-----DKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~-----~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
+ ...++. + |.++|.+ +...||++ .+.+.|+++|+|+|+++
T Consensus 233 ~-~~~~~~--~-~~~~f~~~~~~~~~~~KD~~------~~~~~a~~~g~~~p~~~ 277 (296)
T 3qha_A 233 D-NMKDLE--P-DNFLYQPFLHTRGLGEKDLS------LALALGEAVSVDLPLAR 277 (296)
T ss_dssp S-SCSCCC--T-TSTTHHHHHHHHHHHHHHHH------HHHHHHHHTTCCCHHHH
T ss_pred h-chhhhh--c-CCCCCchhhhhhHHHHHHHH------HHHHHHHHcCCCChHHH
Confidence 6 333333 2 6788998 99999987 88999999999999993
No 16
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=100.00 E-value=1.2e-35 Score=294.15 Aligned_cols=255 Identities=22% Similarity=0.304 Sum_probs=231.7
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
+||||+|||+|.||..||.+|+++||+|++|||++++.+++.+.+ +..+++++++++. +|+||+|||.+.
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g-------~~~~~~~~~~~~~---aDvvi~~vp~~~ 71 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------ASAARSARDAVQG---ADVVISMLPASQ 71 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CEECSSHHHHHTT---CSEEEECCSCHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC-------CeEcCCHHHHHhC---CCeEEEECCCHH
Confidence 468999999999999999999999999999999999999887754 5677899999987 999999999888
Q ss_pred hHHHHHH---HHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHH
Q 011931 86 PVDETIK---TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIED 161 (474)
Q Consensus 86 ~v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ 161 (474)
+++.++. ++.+.+.++++|||+||+.+..++++.+.+.++|++|+++|+++++.++..|. +++++|+++.++++++
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~~~ 151 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARP 151 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccCChhhHhcCCceEEeCCCHHHHHHHHH
Confidence 8999998 88899999999999999999998899988888899999999999999888999 8899999999999999
Q ss_pred HHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhh
Q 011931 162 ILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEI 241 (474)
Q Consensus 162 ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~ 241 (474)
+|+.++.+ ++++++.+.++++|+++|.+.+..+++++|++.++++.| ++++++.+++ +.+...||.++.
T Consensus 152 ll~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~ 220 (302)
T 2h78_A 152 LFEAMGRN-------IFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANG-LEAKVLAEIM---RRSSGGNWALEV 220 (302)
T ss_dssp HHHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---HTSTTCCHHHHH
T ss_pred HHHHhCCC-------eEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HcCCCCCHHHHH
Confidence 99999976 588999999999999999999999999999999999999 9999999987 456677888887
Q ss_pred hcc-------cccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH
Q 011931 242 TAD-------IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (474)
Q Consensus 242 ~~~-------~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~ 288 (474)
+.+ .+... +|.++|.++...||++ .+++.|+++|+|+|+.
T Consensus 221 ~~~~~g~~~~~~~~~-~~~~g~~~~~~~kD~~------~~~~~a~~~g~~~p~~ 267 (302)
T 2h78_A 221 YNPWPGVMENAPASR-DYSGGFMAQLMAKDLG------LAQEAAQASASSTPMG 267 (302)
T ss_dssp CCCSTTTSTTSGGGG-TTCSSSBHHHHHHHHH------HHHHHHHHHTCCCHHH
T ss_pred hCCCcccccccccCC-CCCCCCcHHHHHHHHH------HHHHHHHHcCCCChHH
Confidence 766 55543 4788999999999987 8999999999999988
No 17
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=100.00 E-value=6.6e-35 Score=289.32 Aligned_cols=250 Identities=14% Similarity=0.149 Sum_probs=219.8
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
++++|||||+|.||.+||.+|+++||+|++|||++++.+++.+.+ +..+.+++++++. +|+||+|||++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~~~e~~~~---aDvVi~~vp~~~ 77 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAG-------AHLCESVKAALSA---SPATIFVLLDNH 77 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT-------CEECSSHHHHHHH---SSEEEECCSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC-------CeecCCHHHHHhc---CCEEEEEeCCHH
Confidence 467999999999999999999999999999999999999888754 4567899999998 999999999987
Q ss_pred hHHHHHH--HHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHH
Q 011931 86 PVDETIK--TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (474)
Q Consensus 86 ~v~~vl~--~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (474)
+++.++. .+.+ +.+|++|||+||+.|..++++.+.+.++|++|+++||+|+++.+..+. ++++||+++++++++++
T Consensus 78 ~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~l 156 (306)
T 3l6d_A 78 ATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQHRAL 156 (306)
T ss_dssp HHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHHHHH
T ss_pred HHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcCCHHHHHHHHHH
Confidence 7898886 5544 579999999999999999999999999999999999999987776665 89999999999999999
Q ss_pred HHHHhccCCCCCCceEEe--CC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCc--chhh
Q 011931 163 LLKVAAQVPDSGPCVTYV--SK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGE--LLSF 237 (474)
Q Consensus 163 l~~lg~~~~~~~~~~~~~--g~-~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~--~~s~ 237 (474)
|+.++.+ ++++ |+ .|+|+.+| .+.++.+++++|++.++++.| +|++++.+++. .+. +.|+
T Consensus 157 l~~lg~~-------~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~la~~~G-ld~~~~~~~~~---~~~~~~~s~ 221 (306)
T 3l6d_A 157 LEGLAGH-------TVFLPWDEALAFATVLH----AHAFAAMVTFFEAVGAGDRFG-LPVSKTARLLL---ETSRFFVAD 221 (306)
T ss_dssp HHTTCSE-------EEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---HHHHHHHHH
T ss_pred HHHhcCC-------EEEecCCCCccHHHHHH----HHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---HhhhhcccH
Confidence 9999765 5899 87 79999999 566788999999999999999 99999999984 332 5788
Q ss_pred hHhhhcccccccccCCCc-chHHHHhhhcCCCccHHHHHHHHHHcCCCcccH
Q 011931 238 LIEITADIFGIKDDKGDG-YLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (474)
Q Consensus 238 ~~~~~~~~l~~~~~~~~~-~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~ 288 (474)
+++.+.+.+..+ +|.++ |.++...||++ ++++.|++.|+|+|++
T Consensus 222 ~~~~~~~~~~~~-~~~~~~~~~~~~~KDl~------~~~~~a~~~g~~~p~~ 266 (306)
T 3l6d_A 222 ALEEAVRRLETQ-DFKGDQARLDVHADAFA------HIAQSLHAQGVWTPVF 266 (306)
T ss_dssp HHHHHHHHHHHT-CCCTTSSBHHHHHHHHH------HHHHHHHHTTCCCHHH
T ss_pred HHHHHHHHHhcC-CCCCCcccHHHHHHHHH------HHHHHHHHcCCCchHH
Confidence 888877666554 47764 78999999997 8999999999999999
No 18
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=5.8e-33 Score=276.04 Aligned_cols=246 Identities=13% Similarity=0.105 Sum_probs=205.2
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCC--hHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT--TSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~--~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
.+|||||||+|.||.+||.+|+++|| +|++|||+ +++.+.+.+.+ +..+++++++++. +|+||+|||
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g-------~~~~~~~~e~~~~---aDvVi~~vp 92 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELG-------VSCKASVAEVAGE---CDVIFSLVT 92 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTT-------CEECSCHHHHHHH---CSEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCC-------CEEeCCHHHHHhc---CCEEEEecC
Confidence 46799999999999999999999999 99999997 57777666543 5677899999988 999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHc--CCeEEecCCCCCcccccCCC-ccccCCCHHHHHHH
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL--GLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYI 159 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~--g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v 159 (474)
++. ...++.++.+.+.++++|||+||+.|.+++++.+.+.++ |++|+++|++|++..+ .|. ++++||+++ +++
T Consensus 93 ~~~-~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~-~g~l~i~vgg~~~--~~~ 168 (312)
T 3qsg_A 93 AQA-ALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPH-GHRVPLVVDGDGA--RRF 168 (312)
T ss_dssp TTT-HHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTT-GGGSEEEEESTTH--HHH
T ss_pred chh-HHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhh-cCCEEEEecCChH--HHH
Confidence 985 445778999999999999999999999999999988888 9999999999976554 566 889999877 899
Q ss_pred HHHHHHHhccCCCCCCceEEeCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhh
Q 011931 160 EDILLKVAAQVPDSGPCVTYVSK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFL 238 (474)
Q Consensus 160 ~~ll~~lg~~~~~~~~~~~~~g~-~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~ 238 (474)
+++|+.+|.+ ++++|+ .|+|+.+|+++|.+.++.+++++|++.++++.| +++ ++.+.+. .+. .++.
T Consensus 169 ~~ll~~~g~~-------~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G-ld~-~~~~~l~---~~~-~~~~ 235 (312)
T 3qsg_A 169 QAAFTLYGCR-------IEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMG-LAD-RVLASLD---ASF-PEHH 235 (312)
T ss_dssp HHHHHTTTCE-------EEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHH-HHHHHHH---HHS-GGGT
T ss_pred HHHHHHhCCC-------eEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCH-HHHHHHH---hcC-Cchh
Confidence 9999999976 588998 899999999999999999999999999999999 998 5666663 332 2444
Q ss_pred HhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH
Q 011931 239 IEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (474)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~ 288 (474)
++.+.+.+..+ +|.++|.+ .||++ .+++.|++.|+++|++
T Consensus 236 ~~~~~~~~~~~-~~~~g~~~---~KDl~------~~~~~a~~~g~~~pl~ 275 (312)
T 3qsg_A 236 LRDLALYLVER-NLEHADRR---AHELG------EVAATLCSVGVEPLVA 275 (312)
T ss_dssp HHHHHHHHHHH-HHHHHHHH---HHHHH------HHHHHHHHTTCCCHHH
T ss_pred HHHhhhHhhcC-CCCcccch---HHHHH------HHHHHHHHcCCCcHHH
Confidence 44444444433 36666665 57776 7899999999999998
No 19
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=4.7e-32 Score=267.57 Aligned_cols=257 Identities=19% Similarity=0.281 Sum_probs=220.7
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
.++|+|+|||+|.||..++..|.++|++|.+|||++++.+.+.+.+ +..+.+++++++. +|+||+|+|++
T Consensus 3 ~M~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~D~vi~~v~~~ 72 (299)
T 1vpd_A 3 AMTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG-------AETASTAKAIAEQ---CDVIITMLPNS 72 (299)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CEECSSHHHHHHH---CSEEEECCSSH
T ss_pred cccceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------CeecCCHHHHHhC---CCEEEEECCCH
Confidence 3457999999999999999999999999999999999988877653 4567789898888 99999999987
Q ss_pred hhHHHHH---HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHH
Q 011931 85 APVDETI---KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIE 160 (474)
Q Consensus 85 ~~v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~ 160 (474)
.+++.++ +++.+.+.++++||+++++.+.+.+++.+.+.+.|++|+++|+++++..+..+. .+++||+++.++.++
T Consensus 73 ~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (299)
T 1vpd_A 73 PHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYY 152 (299)
T ss_dssp HHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHH
Confidence 7888888 678888999999999999998878888888888899999999999888877777 788889999999999
Q ss_pred HHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHh
Q 011931 161 DILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIE 240 (474)
Q Consensus 161 ~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~ 240 (474)
++|+.++.+ ++++++.|++.++|+++|.+.+.++++++|++.++++.| ++++++.+++ ..+...++.+.
T Consensus 153 ~ll~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~ 221 (299)
T 1vpd_A 153 DLMKAMAGS-------VVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAG-VNPDLVYQAI---RGGLAGSTVLD 221 (299)
T ss_dssp HHHHTTEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TTSTTCCHHHH
T ss_pred HHHHHHcCC-------eEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HccCCCCHHHH
Confidence 999999976 578888999999999999999999999999999999999 9999998886 45555566665
Q ss_pred hhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 241 ITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
...+.+.. +++.+++.++.+.+|++ ++++.|+++|+|+|+.+
T Consensus 222 ~~~~~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~ 263 (299)
T 1vpd_A 222 AKAPMVMD-RNFKPGFRIDLHIKDLA------NALDTSHGVGAQLPLTA 263 (299)
T ss_dssp HHHHHHHT-TCCCCSSBHHHHHHHHH------HHHHHHHHHTCCCHHHH
T ss_pred HhhhHhhc-CCCCCCCChHHHHHHHH------HHHHHHHHcCCCChHHH
Confidence 44444433 33677889999888876 89999999999999983
No 20
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.2e-32 Score=272.37 Aligned_cols=244 Identities=15% Similarity=0.144 Sum_probs=197.8
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCC-CcEEEEeCCh-------HHHHHHHHhhhhcCCCCccccC-CHHHHHhhcCCCcE
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKG-FPISVYNRTT-------SKVDETVERAKKEGDLPLFGFR-DPESFVNSIQKPRV 76 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G-~~V~v~dr~~-------~~~~~l~~~~~~~~~~~~~~~~-s~~e~~~~l~~~dv 76 (474)
++|+|||||+|.||.+||.+|+++| ++|++|||++ +..+++.+. ++ ++ +++++++. +|+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~-------g~--~~~s~~e~~~~---aDv 90 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL-------GV--EPLDDVAGIAC---ADV 90 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT-------TC--EEESSGGGGGG---CSE
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC-------CC--CCCCHHHHHhc---CCE
Confidence 4578999999999999999999999 9999999998 344443332 13 56 88888888 999
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHH
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEA 155 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~ 155 (474)
||+|||++.. ..++.++.+.++++++|||+||+.|.+++++.+.+.++|++|+++|++|+ ..+..|. ++++||+++
T Consensus 91 Vi~avp~~~~-~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~-~~a~~g~l~i~vgg~~~- 167 (317)
T 4ezb_A 91 VLSLVVGAAT-KAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMAR-VPPYAEKVPILVAGRRA- 167 (317)
T ss_dssp EEECCCGGGH-HHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSC-STTTGGGSEEEEESTTH-
T ss_pred EEEecCCHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCC-chhhcCCEEEEEeCChH-
Confidence 9999999754 45668899999999999999999999999999999889999999999995 4556666 889999877
Q ss_pred HHHHHHHHHHHhccCCCCCCceEEeCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCc-
Q 011931 156 YKYIEDILLKVAAQVPDSGPCVTYVSK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGE- 233 (474)
Q Consensus 156 ~~~v~~ll~~lg~~~~~~~~~~~~~g~-~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~- 233 (474)
++++++|+.++.+ ++++|+ .|+|+.+|+++|.+.++.+++++|++.++++.| ++++ +.+.+. .+.
T Consensus 168 -~~~~~ll~~~g~~-------v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~G-id~~-~~~~l~---~~~~ 234 (317)
T 4ezb_A 168 -VEVAERLNALGMN-------LEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAG-VTER-ILDSVQ---ETFP 234 (317)
T ss_dssp -HHHHHHHHTTTCE-------EEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHH-HHHHHH---HHST
T ss_pred -HHHHHHHHHhCCC-------eEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHH-HHHHHH---hcCc
Confidence 8999999999976 589998 899999999999999999999999999999999 9995 444442 221
Q ss_pred chhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 234 LLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 234 ~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
..+| ..+.+.+..+ +|.++|. +.||++ .+++.|+++|+|+|+++
T Consensus 235 ~~~~--~~~~~~~~~~-~~~~g~~---~~KDl~------~~~~~a~~~g~~~pl~~ 278 (317)
T 4ezb_A 235 GLDW--RDVADYYLSR-TFEHGAR---RVTEMT------EAAETIESFGLNAPMSR 278 (317)
T ss_dssp TSCH--HHHHHHHHHH-HHHHHHH---HHHHHH------HHHHHHHTTTCCCHHHH
T ss_pred cccH--HHhhhhhhcC-CCCCCcc---hHHHHH------HHHHHHHHcCCCChHHH
Confidence 2233 2223333322 2555565 367776 88999999999999983
No 21
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.98 E-value=4.3e-31 Score=260.95 Aligned_cols=255 Identities=22% Similarity=0.355 Sum_probs=221.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
+|||+|||+|.||..++.+|++.|++|++|||++++.+.+.+.+ +..+.+++++++. +|+||+|+|.+.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~D~vi~~vp~~~~ 73 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQG-------AQACENNQKVAAA---SDIIFTSLPNAGI 73 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTT-------CEECSSHHHHHHH---CSEEEECCSSHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CeecCCHHHHHhC---CCEEEEECCCHHH
Confidence 46899999999999999999999999999999999988876542 4567789998888 9999999998878
Q ss_pred HHHHHH---HHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHH
Q 011931 87 VDETIK---TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (474)
Q Consensus 87 v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (474)
++.++. ++.+.+.++++||+++++.+.+.+++.+.+.+++++|+++|+++++..+..|. .++++|+++.++.++++
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~~l 153 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPV 153 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHH
Confidence 888885 78888999999999999998888888888888899999999999987777887 78888999999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhh
Q 011931 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEIT 242 (474)
Q Consensus 163 l~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~ 242 (474)
|+.++.+ ++++++.|++.++|+++|.+.+..+++++|++.++++.| ++++++.+++. .+...++.+..+
T Consensus 154 l~~~g~~-------~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~~---~~~~~~~~~~~~ 222 (301)
T 3cky_A 154 LSVIGKD-------IYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCG-LKPETMQEIIG---KSSGRSYAMEAK 222 (301)
T ss_dssp HHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---TSTTCBHHHHHH
T ss_pred HHHhcCC-------EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---cCCCCCHHHHHh
Confidence 9999976 477899999999999999999999999999999999999 99999988874 444556666555
Q ss_pred cc-cccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 243 AD-IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 243 ~~-~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
.+ .+.. +++.+++.++.+.||++ ++++.++++|+|+|+.+
T Consensus 223 ~~~~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~ 263 (301)
T 3cky_A 223 MEKFIMS-GDFAGGFAMDLQHKDLG------LALEAGKEGNVPLPMTA 263 (301)
T ss_dssp CCCCCCT-CCCSSSSBHHHHHHHHH------HHHHHHHHHTCCCHHHH
T ss_pred hhhhhhc-CCCCCCccHHHHHHHHH------HHHHHHHHhCCCChHHH
Confidence 54 3333 34677899999999986 89999999999999883
No 22
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.97 E-value=1.4e-30 Score=256.57 Aligned_cols=256 Identities=19% Similarity=0.275 Sum_probs=216.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
|||+|||+|.||..++.+|+++|++|++|||++++.+++.+.+ +..+.+++++++. +|+||+|+|.+.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~Dvvi~~vp~~~~~ 70 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAG-------EQVVSSPADVAEK---ADRIITMLPTSINA 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTT-------CEECSSHHHHHHH---CSEEEECCSSHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------CeecCCHHHHHhc---CCEEEEeCCCHHHH
Confidence 5899999999999999999999999999999999988876543 5567789998888 99999999988788
Q ss_pred HHHHHH---HHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHHH
Q 011931 88 DETIKT---LSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDIL 163 (474)
Q Consensus 88 ~~vl~~---l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ll 163 (474)
+.++.+ +.+.++++++||++++..+.+.+++.+.+.+++..|+++|+++++..+..|. .+++|++++.++.++++|
T Consensus 71 ~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~ 150 (296)
T 2gf2_A 71 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELL 150 (296)
T ss_dssp HHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHH
T ss_pred HHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHH
Confidence 888875 4456788999999888888777777777777789999999999887777888 788899999999999999
Q ss_pred HHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhc
Q 011931 164 LKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITA 243 (474)
Q Consensus 164 ~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~ 243 (474)
+.+|.+ +++++..|+|+..|+++|.+.+..+.+++|++.++++.| ++++++.+++. .+...++++....
T Consensus 151 ~~~g~~-------~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G-~~~~~~~~~~~---~~~~~~~~~~~~~ 219 (296)
T 2gf2_A 151 GCMGSN-------VVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLG-LDPKLLAKILN---MSSGRCWSSDTYN 219 (296)
T ss_dssp TTTEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---TSTTCBHHHHHSC
T ss_pred HHHcCC-------eEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---hCcccCHHHHhcC
Confidence 999976 478888999999999999999999999999999999999 99999999874 3445566655432
Q ss_pred c---ccc---ccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHHH
Q 011931 244 D---IFG---IKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIEE 290 (474)
Q Consensus 244 ~---~l~---~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~~ 290 (474)
+ .+. ...++.++|.++.+.||++ ++++.|+++|+|+|+.+.
T Consensus 220 ~~~~~l~~s~~~~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~~ 266 (296)
T 2gf2_A 220 PVPGVMDGVPSANNYQGGFGTTLMAKDLG------LAQDSATSTKSPILLGSL 266 (296)
T ss_dssp SSTTTCSSSGGGGTTCSSSBHHHHHHHHH------HHHHHHHHTTCCCHHHHH
T ss_pred CcccccccchhccCCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHHH
Confidence 1 111 1134677899999998887 899999999999999833
No 23
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.97 E-value=4.6e-31 Score=259.87 Aligned_cols=255 Identities=21% Similarity=0.322 Sum_probs=218.7
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
+||+|+|||+|.||..+|.+|++.|++|++|| ++++.+++.+.+ +..+.+++++++. +|+||+|+|.+.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g-------~~~~~~~~~~~~~---~D~vi~~vp~~~ 70 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLG-------AVNVETARQVTEF---ADIIFIMVPDTP 70 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTT-------CBCCSSHHHHHHT---CSEEEECCSSHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcC-------CcccCCHHHHHhc---CCEEEEECCCHH
Confidence 46799999999999999999999999999999 988888776543 4567789998887 999999999887
Q ss_pred hHHHHHH---HHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHH
Q 011931 86 PVDETIK---TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIED 161 (474)
Q Consensus 86 ~v~~vl~---~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ 161 (474)
+++.++. ++.+.+.++++||+++++.+.+.+++.+.+.+++++|+++|+++++..+..|. .+++||+++.++.+++
T Consensus 71 ~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~ 150 (295)
T 1yb4_A 71 QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKP 150 (295)
T ss_dssp HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHH
Confidence 7888887 78888889999999999988888888888887899999999999887777888 7888999999999999
Q ss_pred HHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhh
Q 011931 162 ILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEI 241 (474)
Q Consensus 162 ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~ 241 (474)
+|+.++.+ ++++++.|.+.++|+++|.+.+..+++++|++.++++.| ++++++.+++ ..+...++.+..
T Consensus 151 ll~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~ 219 (295)
T 1yb4_A 151 LFDILGKN-------ITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAG-ADPVRVRQAL---MGGFASSRILEV 219 (295)
T ss_dssp HHHHHEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TSSSSCBHHHHH
T ss_pred HHHHhcCC-------EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHH---HcCCCCCHHHHH
Confidence 99999976 478889999999999999999999999999999999999 9999988886 445555666654
Q ss_pred hcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 242 TADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
....+.. +++.+++..+.+.||++ ++++.++++|+|+|+++
T Consensus 220 ~~~~~~~-~~~~~g~~~~~~~kd~~------~~~~~a~~~g~~~p~~~ 260 (295)
T 1yb4_A 220 HGERMIN-RTFEPGFKIALHQKDLN------LALQSAKALALNLPNTA 260 (295)
T ss_dssp HHHHHHT-TCCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHH
T ss_pred hhHHHhc-CCCCCCCchHHHHHHHH------HHHHHHHHcCCCChHHH
Confidence 4444443 34678888999888886 88999999999999983
No 24
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.97 E-value=1.1e-30 Score=256.39 Aligned_cols=251 Identities=25% Similarity=0.299 Sum_probs=215.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
||+|+|||+|.||..++.+|++ |++|++|||++++.+.+.+.+ +..++ +++++.. +|+||+|+|++.+
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g-------~~~~~-~~~~~~~---~D~vi~~v~~~~~ 68 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEF-------GSEAV-PLERVAE---ARVIFTCLPTTRE 68 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHH-------CCEEC-CGGGGGG---CSEEEECCSSHHH
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCC-------CcccC-HHHHHhC---CCEEEEeCCChHH
Confidence 4689999999999999999999 999999999999988887654 23344 6676666 9999999998767
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHHHHH
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDILLK 165 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~ll~~ 165 (474)
++.+++++.+.+.++++||++|+..+.+.+++.+.+.++|++|+++|+++++..+..|. .+++|++++.++.++++| .
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~ 147 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-A 147 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-T
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-h
Confidence 88899999888999999999999988888888888877789999999999888787888 788889999999999999 9
Q ss_pred HhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcc-
Q 011931 166 VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITAD- 244 (474)
Q Consensus 166 lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~- 244 (474)
++.+ ++++++.+.+.++|+++|.+.+.++++++|++.++++.| ++++++.+++ ..+...+++++.+.+
T Consensus 148 ~g~~-------~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G-~~~~~~~~~~---~~~~~~s~~~~~~~~~ 216 (289)
T 2cvz_A 148 YAKK-------VVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQG-VSAEKALEVI---NASSGRSNATENLIPQ 216 (289)
T ss_dssp TEEE-------EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH---TTSTTCBHHHHHTHHH
T ss_pred hcCC-------eEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cCHHHHHHHH---HccCCCCHHHHHhccc
Confidence 9875 478888899999999999999999999999999999999 9999988887 445555666665544
Q ss_pred cccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH
Q 011931 245 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (474)
Q Consensus 245 ~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~ 288 (474)
.+.. +++.+++.++.+.||++ ++++.++++|+|+|+.
T Consensus 217 ~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~ 253 (289)
T 2cvz_A 217 RVLT-RAFPKTFALGLLVKDLG------IAMGVLDGEKAPSPLL 253 (289)
T ss_dssp HTTT-SCCCCSSBHHHHHHHHH------HHHHHHTTTCCCCHHH
T ss_pred hhhc-CCCCCCcChHHHHHHHH------HHHHHHHHcCCCChHH
Confidence 3333 34677889999999886 8999999999999988
No 25
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.97 E-value=1.3e-29 Score=252.30 Aligned_cols=255 Identities=16% Similarity=0.266 Sum_probs=217.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
+|+|+|||+|.||..+|.+|++.|++|++|||++++.+++.+.+ +..+.+++++++. +|+||+|+|++.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~---~DvVi~av~~~~~ 99 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEG-------ARLGRTPAEVVST---CDITFACVSDPKA 99 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTT-------CEECSCHHHHHHH---CSEEEECCSSHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcC-------CEEcCCHHHHHhc---CCEEEEeCCCHHH
Confidence 37899999999999999999999999999999999988877643 4566788888887 9999999997778
Q ss_pred HHHHHHHH---HhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHHHH
Q 011931 87 VDETIKTL---SAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIEDI 162 (474)
Q Consensus 87 v~~vl~~l---~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~~l 162 (474)
++.++.++ .+.+.++++||+++|..+...+++.+.+..++..|+++|+++++..+..|. .++++|+++.++.++++
T Consensus 100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~l 179 (316)
T 2uyy_A 100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSC 179 (316)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTHHH
T ss_pred HHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHHHH
Confidence 88888654 477889999999999988888888888877889999999999988888888 67778899999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhh
Q 011931 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEIT 242 (474)
Q Consensus 163 l~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~ 242 (474)
|+.+|.+ ++++++.+.+...|++.|.+....+.+++|++.++++.| ++++++.+++. .+...++.+...
T Consensus 180 l~~~g~~-------~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G-~~~~~~~~~~~---~~~~~s~~~~~~ 248 (316)
T 2uyy_A 180 FQAMGKT-------SFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG-QSQQTLLDILN---QGQLASIFLDQK 248 (316)
T ss_dssp HHHHEEE-------EEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH---HSTTCCHHHHHH
T ss_pred HHHhcCC-------EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH---cCCCCCHHHHHh
Confidence 9999976 478888999999999999999999999999999999999 99999988874 444455555443
Q ss_pred cccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 243 ADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 243 ~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
.+.+.. +++.+++.++.+.+|++ ++++.+++.|+|+|+.+
T Consensus 249 ~~~~l~-~~~~~g~~~~~~~kd~~------~~~~~a~~~gv~~p~~~ 288 (316)
T 2uyy_A 249 CQNILQ-GNFKPDFYLKYIQKDLR------LAIALGDAVNHPTPMAA 288 (316)
T ss_dssp HHHHHH-TCCCCSSBHHHHHHHHH------HHHHHHHHTTCCCHHHH
T ss_pred hHHhhc-CCCCCCCcHHHHHHHHH------HHHHHHHHhCCCChHHH
Confidence 333333 33778889999888876 89999999999999983
No 26
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.96 E-value=1.4e-28 Score=254.26 Aligned_cols=252 Identities=17% Similarity=0.181 Sum_probs=202.9
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh---------------hcCCCCccccCCHHHHHhhcC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK---------------KEGDLPLFGFRDPESFVNSIQ 72 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~---------------~~~~~~~~~~~s~~e~~~~l~ 72 (474)
.+|+|||+|.||.+||.+|+++||+|++||+++++++.+.+... ..+ +++.+++++++++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g--~l~~ttd~~ea~~~-- 84 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAG--RLSFTTDLAEGVKD-- 84 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTT--CEEEESCHHHHHTT--
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccC--CEEEECCHHHHHhc--
Confidence 58999999999999999999999999999999999998875210 011 36678899998887
Q ss_pred CCcEEEEecCCCh----------hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCccccc
Q 011931 73 KPRVIIMLVKAGA----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGAR 142 (474)
Q Consensus 73 ~~dvIil~vp~~~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~ 142 (474)
||+||+|||++. .++++++++.+.+++|++||+.||+.|.+++++.+.+.+.+.. .+.++.++|+.++
T Consensus 85 -aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~-~d~~v~~~Pe~a~ 162 (446)
T 4a7p_A 85 -ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPN-SGAKVVSNPEFLR 162 (446)
T ss_dssp -CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTT-SCCEEEECCCCCC
T ss_pred -CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCC-CCceEEeCccccc
Confidence 999999999874 5899999999999999999999999999999998888776543 5566777777777
Q ss_pred CCC---------ccccCCC-HHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011931 143 HGP---------SLMPGGS-FEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLK 212 (474)
Q Consensus 143 ~G~---------~i~~gg~-~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~ 212 (474)
+|. .+++|++ +++.++++++|+.++.+. ..++++++.++|+++|+++|.+.+..+++++|+..+|+
T Consensus 163 eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~----~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~ 238 (446)
T 4a7p_A 163 EGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQ----SAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLCE 238 (446)
T ss_dssp TTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC---------CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCC----CeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 775 5788885 889999999998876430 01478889999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 213 SVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 213 ~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
+.| +|++++.+++. ... ++....+. .+++|...-+.||.. +.+..|+++|+++|+++
T Consensus 239 ~~G-iD~~~v~~~~~---~~~------rig~~~l~----pg~G~gg~c~~KD~~------~l~~~A~~~g~~~~l~~ 295 (446)
T 4a7p_A 239 QVG-ADVQEVSRGIG---MDN------RIGGKFLH----AGPGYGGSCFPKDTL------ALMKTAADNETPLRIVE 295 (446)
T ss_dssp HTT-CCHHHHHHHHH---TST------TC---CCC----CCSCCCTTTHHHHHH------HHHHHHHHTTCCCHHHH
T ss_pred HcC-CCHHHHHHHHh---cCC------CCCCccCC----CCCCcchhhHHHHHH------HHHHHHHhcCCCCHHHH
Confidence 999 99999999873 221 01011111 234566667788875 78889999999999993
No 27
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.95 E-value=1.2e-27 Score=248.44 Aligned_cols=253 Identities=16% Similarity=0.124 Sum_probs=201.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh---------------hcCCCCccccCCHHHHHhhc
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK---------------KEGDLPLFGFRDPESFVNSI 71 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~---------------~~~~~~~~~~~s~~e~~~~l 71 (474)
+|||+|||+|.||.++|.+|+++||+|++||+++++++.+.+... ..+ ++..+++++++++.
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~--~l~~t~d~~ea~~~- 78 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAG--RLRFGTEIEQAVPE- 78 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTT--SEEEESCHHHHGGG-
T ss_pred CCEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccC--cEEEECCHHHHHhc-
Confidence 379999999999999999999999999999999999988876210 011 35677889998887
Q ss_pred CCCcEEEEecCCCh---------hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe---EEecCCCCCcc
Q 011931 72 QKPRVIIMLVKAGA---------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL---YLGMGVSGGEE 139 (474)
Q Consensus 72 ~~~dvIil~vp~~~---------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~---~v~~pvsgg~~ 139 (474)
+|+||+|||++. .++++++++.+.++++++||+.||+.|.+++++.+.+.+.+.. .++.++.++|+
T Consensus 79 --aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe 156 (450)
T 3gg2_A 79 --ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPE 156 (450)
T ss_dssp --CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCC
T ss_pred --CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechh
Confidence 999999999874 7899999999999999999999999999999888777654211 24456666666
Q ss_pred cccCCC---------ccccCC-CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011931 140 GARHGP---------SLMPGG-SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYD 209 (474)
Q Consensus 140 ~a~~G~---------~i~~gg-~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~ 209 (474)
.+++|. .+++|| ++++.++++++|+.++.+ ..++++++.+.++++|+++|.+.+..+++++|+..
T Consensus 157 ~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~-----~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 231 (450)
T 3gg2_A 157 FLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLN-----NFRVLFMDIASAEMTKYAANAMLATRISFMNDVAN 231 (450)
T ss_dssp CCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCS-----CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcC-----CCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666665 367786 589999999999988752 11367888999999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 210 VLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 210 l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
+|++.| +|++++.+++. ... ++....+. .+++|...-+.||.. +.+..|+++|+++|++.
T Consensus 232 l~~~~G-id~~~v~~~~~---~~~------rig~~~~~----pg~G~gg~c~~KD~~------~l~~~a~~~g~~~~l~~ 291 (450)
T 3gg2_A 232 LCERVG-ADVSMVRLGIG---SDS------RIGSKFLY----PGCGYGGSCFPKDVK------ALIRTAEDNGYRMEVLE 291 (450)
T ss_dssp HHHHHT-CCHHHHHHHHH---TST------TTCSSSCC----CSSCCCSSHHHHHHH------HHHHHHHHTTCCCHHHH
T ss_pred HHHHhC-CCHHHHHHHHc---CCC------CCCcccCC----CCCCCCcccHHhhHH------HHHHHHHHcCCCcHHHH
Confidence 999999 99999999873 221 01001111 123455566778875 78889999999999993
No 28
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.95 E-value=4.2e-27 Score=244.70 Aligned_cols=250 Identities=13% Similarity=0.059 Sum_probs=197.4
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC-CC-cEEEEeCChH----HHHHHHHhhh-----------------hcCCCCccccC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK-GF-PISVYNRTTS----KVDETVERAK-----------------KEGDLPLFGFR 62 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~-G~-~V~v~dr~~~----~~~~l~~~~~-----------------~~~~~~~~~~~ 62 (474)
++|||+|||+|.||.++|.+|+++ || +|++||++++ +++.+.+... ..+ ++..++
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g--~l~~tt 94 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAG--KFECTP 94 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTT--CEEEES
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccC--CeEEeC
Confidence 468999999999999999999999 99 9999999999 8888764210 011 355555
Q ss_pred CHHHHHhhcCCCcEEEEecCCCh-----------hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHH--HcC---
Q 011931 63 DPESFVNSIQKPRVIIMLVKAGA-----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMA--ELG--- 126 (474)
Q Consensus 63 s~~e~~~~l~~~dvIil~vp~~~-----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~--~~g--- 126 (474)
+ .++++. +|+||+|||++. .+..+.+++.+.+++|++||+.||+.|.+++++.+.+. ..|
T Consensus 95 d-~ea~~~---aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~ 170 (478)
T 3g79_A 95 D-FSRISE---LDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKA 170 (478)
T ss_dssp C-GGGGGG---CSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCB
T ss_pred c-HHHHhc---CCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCc
Confidence 6 566676 999999999873 26667789999999999999999999999998876432 344
Q ss_pred ---CeEEecCCCCCcccccCC----CccccCCCHHHHHHHHHHHHHH-hccCCCCCCceEEeCCchhHHHHHHHHHHHHH
Q 011931 127 ---LLYLGMGVSGGEEGARHG----PSLMPGGSFEAYKYIEDILLKV-AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEY 198 (474)
Q Consensus 127 ---~~~v~~pvsgg~~~a~~G----~~i~~gg~~~~~~~v~~ll~~l-g~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~ 198 (474)
+.++++|.+..+..+..+ +.++.|++++.+++++++|+.+ +.. ++++++.++|+++|+++|.+.+
T Consensus 171 ~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~-------~~~~~~~~~aE~~Kl~~N~~~a 243 (478)
T 3g79_A 171 GEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVG-------QVIPMSATAAEVTKTAENTFRD 243 (478)
T ss_dssp TTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSC-------CEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCC-------eEEeCCHHHHHHHHHHHHHHHH
Confidence 478899988776554332 2688899999999999999999 654 4888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcc--hHHHHhhhcCCCccHHHHHH
Q 011931 199 GDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGY--LVDKVLDKTGMKGTGKWTVQ 276 (474)
Q Consensus 199 ~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~--~~~~i~~~~~~k~tg~~~~~ 276 (474)
..+++++|+..+|++.| +|.+++.+++. .. +.+++.. ..|.|+| .-.-+.||.. ..+.
T Consensus 244 ~~Ia~~nE~~~l~e~~G-iD~~~v~~~~~---~~----~~~ri~~------~~~~PG~G~GG~c~~KD~~------~l~~ 303 (478)
T 3g79_A 244 LQIAAINQLALYCEAMG-INVYDVRTGVD---SL----KGEGITR------AVLWPGAGVGGHCLTKDTY------HLER 303 (478)
T ss_dssp HHHHHHHHHHHHHHHTT-CCHHHHHHHHH---TS----CCSSSCC------CCCCCCSCCCSSHHHHHHH------HHHH
T ss_pred HHHHHHHHHHHHHHHcC-CCHHHHHHHHC---CC----chhhhcc------ccCCCCCCcchhhHHHHHH------HHHH
Confidence 99999999999999999 99999999873 21 1112211 2244544 3345777775 7888
Q ss_pred HHHHcCCC-------cccH
Q 011931 277 QAADLSVA-------APTI 288 (474)
Q Consensus 277 ~a~~~gv~-------~p~~ 288 (474)
.|+++|++ .|++
T Consensus 304 ~a~~~g~~~~~~~~~~~li 322 (478)
T 3g79_A 304 GVKIGRGELDYPEGADSIY 322 (478)
T ss_dssp HHTTSSCCCCCCSSCCCHH
T ss_pred HHHHcCCCcccccchhHHH
Confidence 99999988 6777
No 29
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.95 E-value=1.2e-26 Score=237.94 Aligned_cols=208 Identities=13% Similarity=0.121 Sum_probs=175.2
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-----------hcCCCCccccCCHHHHHhhcCCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-----------KEGDLPLFGFRDPESFVNSIQKP 74 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-----------~~~~~~~~~~~s~~e~~~~l~~~ 74 (474)
.+|||+|||+|.||.++|..|++ ||+|++||+++++++.+.+... ..+..+++.+++++++++. +
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~---a 110 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRN---A 110 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTT---C
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhC---C
Confidence 46899999999999999999998 9999999999999988765210 0000036778888888887 9
Q ss_pred cEEEEecCCCh----------hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCC
Q 011931 75 RVIIMLVKAGA----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHG 144 (474)
Q Consensus 75 dvIil~vp~~~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G 144 (474)
|+||+|||++. .++++++++.+ +++|++||+.||+.|.+++++.+.+.+.+ +..+|+++++..+..+
T Consensus 111 DvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~--v~~sPe~~~~G~A~~~ 187 (432)
T 3pid_A 111 DYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDN--VIFSPEFLREGRALYD 187 (432)
T ss_dssp SEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCC--EEECCCCCCTTSHHHH
T ss_pred CEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhcc--EeecCccCCcchhhhc
Confidence 99999999872 58888899999 99999999999999999999998886654 4459999998777554
Q ss_pred C----ccccCCCHHHHHHHHHHHHH--HhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 011931 145 P----SLMPGGSFEAYKYIEDILLK--VAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLT 218 (474)
Q Consensus 145 ~----~i~~gg~~~~~~~v~~ll~~--lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~ 218 (474)
. .+++||+++..+++.++|.. ++.. ..+++++.++|+++|+++|.+.+..+++++|+..+|++.| +|
T Consensus 188 ~l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~------~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae~~G-iD 260 (432)
T 3pid_A 188 NLHPSRIVIGERSARAERFADLLKEGAIKQD------IPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAESQG-LN 260 (432)
T ss_dssp HHSCSCEEESSCSHHHHHHHHHHHHHCSSSS------CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CC
T ss_pred ccCCceEEecCCHHHHHHHHHHHHhhhccCC------CeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CC
Confidence 2 68999999999999999987 3322 1256678999999999999999999999999999999999 99
Q ss_pred HHHHHHHHH
Q 011931 219 NEELQNVFT 227 (474)
Q Consensus 219 ~~~~~~~~~ 227 (474)
.+++.+++.
T Consensus 261 ~~~v~~~~~ 269 (432)
T 3pid_A 261 SKQIIEGVC 269 (432)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999999873
No 30
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.94 E-value=3.6e-26 Score=221.45 Aligned_cols=238 Identities=14% Similarity=0.143 Sum_probs=186.9
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeC--ChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNR--TTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr--~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
|||+|||+|.||..||.+|+++||+|++||| ++++.+++.+.+ +. .+++++++. +|+||+|||+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g-------~~--~~~~~~~~~---aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVG-------VT--ETSEEDVYS---CPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHT-------CE--ECCHHHHHT---SSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCC-------Cc--CCHHHHHhc---CCEEEEECCCHH
Confidence 5899999999999999999999999999999 777777776543 33 677888877 999999999975
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccccCCCHHHHHHHHHHHHH
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLK 165 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~ 165 (474)
.++. +.++.+.+++ +|||++++.+.+.+++.+.+.+.| |+++|+++++..+..|..++++|+.+ +.+++ |+.
T Consensus 69 ~~~~-~~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g--~~~~~v~~~~~~~~~g~~~~~~g~~~--~~~~~-l~~ 140 (264)
T 1i36_A 69 ALGA-ARRAGRHVRG--IYVDINNISPETVRMASSLIEKGG--FVDAAIMGSVRRKGADIRIIASGRDA--EEFMK-LNR 140 (264)
T ss_dssp HHHH-HHHHHTTCCS--EEEECSCCCHHHHHHHHHHCSSSE--EEEEEECSCHHHHGGGCEEEEESTTH--HHHHG-GGG
T ss_pred HHHH-HHHHHHhcCc--EEEEccCCCHHHHHHHHHHHhhCC--eeeeeeeCCccccccCCeEEecCCcH--HHhhh-HHH
Confidence 5555 4677777765 999999998888878887776666 89999999988777777777788765 78888 999
Q ss_pred HhccCCCCCCceEEeCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcc
Q 011931 166 VAAQVPDSGPCVTYVSK-GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITAD 244 (474)
Q Consensus 166 lg~~~~~~~~~~~~~g~-~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~ 244 (474)
+|.+ ++++++ .|.+.++|+++|.+.+.++.+++|++.++++.| ++++ +.+++. .+...+++. .. +
T Consensus 141 ~g~~-------~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G-~~~~-~~~~~~---~~~g~~~~~-~~-~ 206 (264)
T 1i36_A 141 YGLN-------IEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLG-LEED-VLEMLE---YTEGNDFRE-SA-I 206 (264)
T ss_dssp GTCE-------EEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHH-HHHHHH---TTSCSSTHH-HH-H
T ss_pred cCCe-------eEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcHH-HHHHHH---HhcCccHHH-HH-H
Confidence 9865 578887 799999999999999999999999999999999 9986 666653 322223332 22 2
Q ss_pred cccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHHH
Q 011931 245 IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIEE 290 (474)
Q Consensus 245 ~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~~ 290 (474)
.+..+ ++.+++. ..++++ .+++.++++ +|+|+++.
T Consensus 207 ~~~~~-~~~~g~~---~~~~~~------~~~~~a~~~-v~~p~~~~ 241 (264)
T 1i36_A 207 SRLKS-SCIHARR---RYEEMK------EVQDMLAEV-IDPVMPTC 241 (264)
T ss_dssp HHHHH-HHHTHHH---HHHHHH------HHHHHHHTT-SCCSHHHH
T ss_pred HHhcC-CCCcchh---hHHHHH------HHHHHHHHh-cCchHHHH
Confidence 22222 2455554 345554 688999999 99999843
No 31
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.93 E-value=4.7e-25 Score=226.46 Aligned_cols=202 Identities=12% Similarity=0.151 Sum_probs=168.4
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh---------------cCCCCccccCCHHHHHhhcC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK---------------EGDLPLFGFRDPESFVNSIQ 72 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~---------------~~~~~~~~~~s~~e~~~~l~ 72 (474)
.|..|||+|.||.+||.+|+++||+|++||+++++++.+.+.... .+ ++..+++ ++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g--~l~~ttd-------~~ 82 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSG--KLKVSTT-------PE 82 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEEESS-------CC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccC--ceEEeCc-------hh
Confidence 479999999999999999999999999999999999998753210 00 1222222 23
Q ss_pred CCcEEEEecCCCh-----------hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH-cC------CeEEecCC
Q 011931 73 KPRVIIMLVKAGA-----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE-LG------LLYLGMGV 134 (474)
Q Consensus 73 ~~dvIil~vp~~~-----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~-~g------~~~v~~pv 134 (474)
.+|+||+|||++. .+..+.+++.+.+++|++||+.||+.|.+++++.+.+.+ .| +.++++|.
T Consensus 83 ~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe 162 (431)
T 3ojo_A 83 ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPE 162 (431)
T ss_dssp CCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCC
T ss_pred hCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCC
Confidence 4999999999985 267777899999999999999999999999998876544 45 36888997
Q ss_pred CCCcccccCC---C-ccccCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011931 135 SGGEEGARHG---P-SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDV 210 (474)
Q Consensus 135 sgg~~~a~~G---~-~i~~gg~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l 210 (474)
+..+..+.++ + .++.|+++++.++++++|+.++.. ++++++.++|+++|+++|.+.+..+++++|+..+
T Consensus 163 ~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~-------~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l 235 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQG-------EMIETDARTAEMSKLMENTYRDVNIALANELTKI 235 (431)
T ss_dssp CCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTTTCCS-------CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHHHhCC-------cEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765544332 3 688889999999999999999865 3778899999999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHH
Q 011931 211 LKSVGKLTNEELQNVF 226 (474)
Q Consensus 211 ~~~~G~l~~~~~~~~~ 226 (474)
|++.| +|.+++.+++
T Consensus 236 ~e~~G-iD~~~v~~~~ 250 (431)
T 3ojo_A 236 CNNLN-INVLDVIEMA 250 (431)
T ss_dssp HHHTT-CCHHHHHHHH
T ss_pred HHHcC-CCHHHHHHHH
Confidence 99999 9999999987
No 32
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.93 E-value=3.6e-25 Score=231.60 Aligned_cols=248 Identities=11% Similarity=0.095 Sum_probs=194.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhh------------hhcCCCCccccCCHHHHHhhcC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERA------------KKEGDLPLFGFRDPESFVNSIQ 72 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~------------~~~~~~~~~~~~s~~e~~~~l~ 72 (474)
||||+|||+|.||.++|.+|+++ |++|++|||++++++.+.+.. ......++..+++++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~-- 82 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE-- 82 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH--
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc--
Confidence 57999999999999999999999 899999999999988753210 00000035667788888888
Q ss_pred CCcEEEEecCCChh--------------HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 73 KPRVIIMLVKAGAP--------------VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 73 ~~dvIil~vp~~~~--------------v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
+|+||+|||++.. +.++++++.+.+.++++||++||+.+.+++++.+.+++.+..+++.+++++|
T Consensus 83 -aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~P 161 (467)
T 2q3e_A 83 -ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNP 161 (467)
T ss_dssp -CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred -CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCH
Confidence 9999999998753 5677788989899999999999999999988888887776556777888888
Q ss_pred ccccCCC-c--------cccCC-----CHHHHHHHHHHHHHH-hccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHH
Q 011931 139 EGARHGP-S--------LMPGG-----SFEAYKYIEDILLKV-AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQL 203 (474)
Q Consensus 139 ~~a~~G~-~--------i~~gg-----~~~~~~~v~~ll~~l-g~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~ 203 (474)
+.+..|. . +++|| ++++.+.++++|+.+ +.. ++++++.+.++++|++.|.+.+..+++
T Consensus 162 e~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~-------~~~~~~~~~ae~~Kl~~N~~~a~~ia~ 234 (467)
T 2q3e_A 162 EFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPRE-------KILTTNTWSSELSKLAANAFLAQRISS 234 (467)
T ss_dssp CCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGG-------GEEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCC-------eEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887 3 67888 788899999999998 544 478888999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCC
Q 011931 204 IAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSV 283 (474)
Q Consensus 204 i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv 283 (474)
++|+..++++.| ++.+++.+++..+.. ..+ ..+.. +++|.-.-+.||.. +....|+++|+
T Consensus 235 ~nE~~~l~~~~G-id~~~v~~~~~~~~~--~~~-------~~~~p----g~g~gg~c~~kD~~------~l~~~a~~~g~ 294 (467)
T 2q3e_A 235 INSISALCEATG-ADVEEVATAIGMDQR--IGN-------KFLKA----SVGFGGSCFQKDVL------NLVYLCEALNL 294 (467)
T ss_dssp HHHHHHHHHHHT-CCHHHHHHHHHTSTT--TCS-------SSCCC----CSCCCSSSHHHHHH------HHHHHHHHTTC
T ss_pred HHHHHHHHHHhC-cCHHHHHHHHcCCCC--CCc-------cccCC----CCCCCCccHHHHHH------HHHHHHHHcCC
Confidence 999999999999 999999998743211 111 11111 11122233456665 67788999998
Q ss_pred C
Q 011931 284 A 284 (474)
Q Consensus 284 ~ 284 (474)
+
T Consensus 295 ~ 295 (467)
T 2q3e_A 295 P 295 (467)
T ss_dssp H
T ss_pred c
Confidence 7
No 33
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.93 E-value=4.5e-25 Score=230.80 Aligned_cols=251 Identities=16% Similarity=0.092 Sum_probs=194.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh---------------cCCCCccccCCHHHHHhhc
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK---------------EGDLPLFGFRDPESFVNSI 71 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~---------------~~~~~~~~~~s~~e~~~~l 71 (474)
.|||+|||+|.||.++|..|+++||+|++||+++++++.+.+.+.. .+ ++..+++++++++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~--~l~~ttd~~~a~~~- 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAG--RLRFSTDIEAAVAH- 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEEECCHHHHHHH-
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccC--CEEEECCHHHHhhc-
Confidence 4799999999999999999999999999999999999988754200 00 35667788888887
Q ss_pred CCCcEEEEecCCC---------hhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHc---CCeE-EecCCCCCc
Q 011931 72 QKPRVIIMLVKAG---------APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL---GLLY-LGMGVSGGE 138 (474)
Q Consensus 72 ~~~dvIil~vp~~---------~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~---g~~~-v~~pvsgg~ 138 (474)
+|+||+|||++ ..++++++++.+.++++++||+.||+.|.+++++.+.+.+. | .| ++.++.++|
T Consensus 85 --aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g-~~~~~~~v~~~P 161 (478)
T 2y0c_A 85 --GDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKR-GGDQMFSVVSNP 161 (478)
T ss_dssp --CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHT-TCCCCEEEEECC
T ss_pred --CCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCC-CCCccEEEEECh
Confidence 99999999986 68999999999999999999999999999988887776553 3 22 455677777
Q ss_pred ccccCCC---------ccccCCC-H----HHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHH
Q 011931 139 EGARHGP---------SLMPGGS-F----EAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLI 204 (474)
Q Consensus 139 ~~a~~G~---------~i~~gg~-~----~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i 204 (474)
+.+.+|. .++.|++ + ++.+.++++|+.+..+ ..++++++.+.+.+.|++.|.+.+..++++
T Consensus 162 e~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~ 236 (478)
T 2y0c_A 162 EFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRN-----HERTLYMDVRSAEFTKYAANAMLATRISFM 236 (478)
T ss_dssp CCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSS-----SCCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhcc-----CCeEEcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777765 4677775 5 7889999999886631 124788889999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHH--HHhhhcCCCccHHHHHHHHHHcC
Q 011931 205 AEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVD--KVLDKTGMKGTGKWTVQQAADLS 282 (474)
Q Consensus 205 ~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~--~i~~~~~~k~tg~~~~~~a~~~g 282 (474)
+|+..+|++.| ++.+++.+.+.. . + ++.. ..+.+++.+. -+.+|.. .....|+++|
T Consensus 237 nE~~~la~~~G-id~~~v~~~i~~---~---~-------rig~--~~~~pG~g~gg~c~~kD~~------~l~~~A~~~g 294 (478)
T 2y0c_A 237 NELANLADRFG-ADIEAVRRGIGS---D---P-------RIGY--HFLYAGCGYGGSCFPKDVE------ALIRTADEHG 294 (478)
T ss_dssp HHHHHHHHHTT-CCHHHHHHHHHT---S---T-------TTCS--TTCCCSSCCCSSSHHHHHH------HHHHHHHHTT
T ss_pred HHHHHHHHHhC-CCHHHHHHHHhc---C---C-------ccCc--ccCCCCcccccCcCHHHHH------HHHHHHHHcC
Confidence 99999999999 999998887631 0 0 0000 0122222211 2344543 6778999999
Q ss_pred CCcccHHH
Q 011931 283 VAAPTIEE 290 (474)
Q Consensus 283 v~~p~~~~ 290 (474)
+++|+++.
T Consensus 295 v~~pl~~~ 302 (478)
T 2y0c_A 295 QSLQILKA 302 (478)
T ss_dssp CCCHHHHH
T ss_pred CCcHHHHH
Confidence 99999843
No 34
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.93 E-value=4.1e-25 Score=231.65 Aligned_cols=251 Identities=16% Similarity=0.114 Sum_probs=190.7
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhh---cC---------CCCccccCCHHHHHhhc
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKK---EG---------DLPLFGFRDPESFVNSI 71 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~---~~---------~~~~~~~~s~~e~~~~l 71 (474)
+||||+|||+|.||.++|.+|+++ ||+|++||+++++++.+.+.... .+ ..++..+++++++++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~- 86 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAE- 86 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhc-
Confidence 457999999999999999999998 79999999999999887642100 00 0024566788788887
Q ss_pred CCCcEEEEecCCCh--------------hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH-cCCe-EEecCCC
Q 011931 72 QKPRVIIMLVKAGA--------------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE-LGLL-YLGMGVS 135 (474)
Q Consensus 72 ~~~dvIil~vp~~~--------------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~-~g~~-~v~~pvs 135 (474)
+|+||+|||++. .++++++++.+.++++++||+.||..|.+++++.+.+++ .++. .++.++.
T Consensus 87 --aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~ 164 (481)
T 2o3j_A 87 --ADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVL 164 (481)
T ss_dssp --CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEE
T ss_pred --CCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEE
Confidence 999999998864 388888999999999999999999999999988888877 5521 2233333
Q ss_pred CCcccccCCC---------ccccCCCH-----HHHHHHHHHHHHHhc-cCCCCCCceEEeCCchhHHHHHHHHHHHHHHH
Q 011931 136 GGEEGARHGP---------SLMPGGSF-----EAYKYIEDILLKVAA-QVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGD 200 (474)
Q Consensus 136 gg~~~a~~G~---------~i~~gg~~-----~~~~~v~~ll~~lg~-~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~ 200 (474)
++|+.+..|. .+++|++. ++++.++++|+.++. . ++++++.++++++|++.|.+.+..
T Consensus 165 ~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~-------~~~~~d~~~ae~~Kl~~N~~~a~~ 237 (481)
T 2o3j_A 165 SNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRN-------RIITTNTWSSELSKLVANAFLAQR 237 (481)
T ss_dssp ECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGG-------GEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred eCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCC-------eEEecCHHHHHHHHHHHHHHHHHH
Confidence 4444433332 57778754 578889999999884 4 477888999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcc--hHHHHhhhcCCCccHHHHHHHH
Q 011931 201 MQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGY--LVDKVLDKTGMKGTGKWTVQQA 278 (474)
Q Consensus 201 ~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~--~~~~i~~~~~~k~tg~~~~~~a 278 (474)
+++++|+..+|++.| ++.+++.+++. .+. ++.. ..|.|++ ...-+.||.. +....|
T Consensus 238 ia~~nE~~~la~~~G-id~~~v~~~~~---~~~------ri~~------~~~~pg~g~gg~c~~KD~~------~l~~~A 295 (481)
T 2o3j_A 238 ISSINSISAVCEATG-AEISEVAHAVG---YDT------RIGS------KFLQASVGFGGSCFQKDVL------SLVYLC 295 (481)
T ss_dssp HHHHHHHHHHHHHHS-CCHHHHHHHHH---TST------TTCS------SSCCCCSCCCSSSHHHHHH------HHHHHH
T ss_pred HHHHHHHHHHHHHhC-cCHHHHHHHHc---cCC------CCCC------CCCCCCCccCCccHHHHHH------HHHHHH
Confidence 999999999999999 99999999873 221 0100 1133333 3344667775 678899
Q ss_pred HHcCCC--cccH
Q 011931 279 ADLSVA--APTI 288 (474)
Q Consensus 279 ~~~gv~--~p~~ 288 (474)
+++|+| +|++
T Consensus 296 ~~~g~~~~~~l~ 307 (481)
T 2o3j_A 296 ESLNLPQVADYW 307 (481)
T ss_dssp HHTTCHHHHHHH
T ss_pred HHcCCCccchHH
Confidence 999999 8877
No 35
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.92 E-value=1.4e-24 Score=225.37 Aligned_cols=248 Identities=15% Similarity=0.163 Sum_probs=190.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh---------------cCCCCccccCCHHHHHhhcC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK---------------EGDLPLFGFRDPESFVNSIQ 72 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~---------------~~~~~~~~~~s~~e~~~~l~ 72 (474)
|||+|||+|.||.++|..|+++||+|++||+++++++.+.+.+.. .+ ++..+++++++++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g--~l~~t~~~~~~~~~-- 76 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTG--RLSGTTDFKKAVLD-- 76 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEEESCHHHHHHT--
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccC--ceEEeCCHHHHhcc--
Confidence 589999999999999999999999999999999999887652100 10 25667788888887
Q ss_pred CCcEEEEecCCChh---------HHHHHHHHHhcccC---CCEEEecCCCCchh-HHHHHHHHHHc-CCeE-EecCCCCC
Q 011931 73 KPRVIIMLVKAGAP---------VDETIKTLSAYMEK---GDCIIDGGNEWYEN-TERREKAMAEL-GLLY-LGMGVSGG 137 (474)
Q Consensus 73 ~~dvIil~vp~~~~---------v~~vl~~l~~~l~~---g~iiId~st~~~~~-~~~~~~~l~~~-g~~~-v~~pvsgg 137 (474)
+|+||+|||++.. ++++++++.+.+++ +++||+.||..+.+ .+.+.+.+++. |..+ ++.++.++
T Consensus 77 -aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~ 155 (436)
T 1mv8_A 77 -SDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTN 155 (436)
T ss_dssp -CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEEC
T ss_pred -CCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEEC
Confidence 9999999998865 89999999999988 99999999999888 55566666654 5554 45566666
Q ss_pred cccccCCC---------ccccCCC-HHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 011931 138 EEGARHGP---------SLMPGGS-FEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEA 207 (474)
Q Consensus 138 ~~~a~~G~---------~i~~gg~-~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea 207 (474)
|+.+..|. .++.|++ +++.+.++++|+.++.+ +++++.+.++++|++.|++.+..+++++|+
T Consensus 156 Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~--------v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 156 PEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAP--------IIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSC--------EEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCC--------EEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666665 3667775 88899999999998853 334778999999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCC--cchHHHHhhhcCCCccHHHHHHHHHHcCCCc
Q 011931 208 YDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGD--GYLVDKVLDKTGMKGTGKWTVQQAADLSVAA 285 (474)
Q Consensus 208 ~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~--~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~ 285 (474)
..++++.| ++.+++.+++. ... .+.. .. ..+.+ +|....+.+|.. .....|+++|+++
T Consensus 228 ~~l~~~~G-id~~~v~~~~~---~~~--r~~~-------~~-~~~~pg~g~gg~~~~kD~~------~l~~~a~~~g~~~ 287 (436)
T 1mv8_A 228 GNIAKAVG-VDGREVMDVIC---QDH--KLNL-------SR-YYMRPGFAFGGSCLPKDVR------ALTYRASQLDVEH 287 (436)
T ss_dssp HHHHHHTT-SCHHHHHHHHT---TCT--TTTT-------SS-TTCSCCSCCCSSSHHHHHH------HHHHHHHHTTCCC
T ss_pred HHHHHHhC-CCHHHHHHHhc---CCC--CCCC-------cc-cCCCCcccccCcCcHhhHH------HHHHHHHHcCCCc
Confidence 99999999 99999888863 111 0000 00 01222 233334455543 6778999999999
Q ss_pred ccH
Q 011931 286 PTI 288 (474)
Q Consensus 286 p~~ 288 (474)
|++
T Consensus 288 pl~ 290 (436)
T 1mv8_A 288 PML 290 (436)
T ss_dssp TTG
T ss_pred HHH
Confidence 998
No 36
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.90 E-value=1.5e-22 Score=207.68 Aligned_cols=248 Identities=13% Similarity=0.065 Sum_probs=183.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc-----------CCCCccccCCHHHHHhhcCCCcE
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE-----------GDLPLFGFRDPESFVNSIQKPRV 76 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~-----------~~~~~~~~~s~~e~~~~l~~~dv 76 (474)
|||+|||+|.||.++|.+|++ ||+|++|||++++++.+.+.+... ...++..++++++.++. +|+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~---aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKE---AEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHH---CSE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcC---CCE
Confidence 589999999999999999999 999999999999998886543100 00023556778788877 999
Q ss_pred EEEecCCCh----------hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCccccc---C
Q 011931 77 IIMLVKAGA----------PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGAR---H 143 (474)
Q Consensus 77 Iil~vp~~~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~---~ 143 (474)
||+|||++. .++++++++.+ +.++++||+.||..+.+++++.+.+.+. .++.+|....+..+. .
T Consensus 77 viiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~G~a~~~~~ 153 (402)
T 1dlj_A 77 VIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRESKALYDNL 153 (402)
T ss_dssp EEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCTTSTTHHHH
T ss_pred EEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccCcchhhccc
Confidence 999999974 58999999999 9999999999999999988888766443 566777666554333 1
Q ss_pred CC-ccccCCCH-------HHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011931 144 GP-SLMPGGSF-------EAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVG 215 (474)
Q Consensus 144 G~-~i~~gg~~-------~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G 215 (474)
.+ .+++|+++ +..+.+.++|..-+.+ ...+++.++.++++++|++.|.+.+..+++++|+..+|++.|
T Consensus 154 ~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~G 229 (402)
T 1dlj_A 154 YPSRIIVSCEENDSPKVKADAEKFALLLKSAAKK----NNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRK 229 (402)
T ss_dssp SCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSC----SCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcccchhHHHHHHHHHHHhhhhcc----CCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22 57888876 5556666666542221 011367788999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCC--cchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHHH
Q 011931 216 KLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGD--GYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIEE 290 (474)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~--~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~~ 290 (474)
+|.+++.+++. .+. ++ .. ..+.| +|...-+.||.. +....|. |+++|++..
T Consensus 230 -id~~~v~~~~~---~~~------ri----~~--~~~~pg~g~gg~c~~kD~~------~l~~~a~--~~~~~l~~~ 282 (402)
T 1dlj_A 230 -LNSHMIIQGIS---YDD------RI----GM--HYNNPSFGYGGYSLPKDTK------QLLANYN--NIPQTLIEA 282 (402)
T ss_dssp -CCHHHHHHHHH---TST------TT----CS--SSCCCCSSCCSSHHHHHHH------HHHHHHT--TSSCSHHHH
T ss_pred -CCHHHHHHHhc---cCC------CC----Cc--CCCCCCCccCCccHHhhHH------HHHHHhc--CCChHHHHH
Confidence 99999998873 221 11 11 01223 455556777764 4445553 889998844
No 37
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.90 E-value=1.9e-23 Score=210.68 Aligned_cols=267 Identities=15% Similarity=0.112 Sum_probs=190.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcC---CC----CccccCCHHHHHhhcCCCcEEEE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEG---DL----PLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~---~~----~~~~~~s~~e~~~~l~~~dvIil 79 (474)
+|||+|||+|.||+++|..|+++|++|++|||++++++.+.+.+.... +. ++..+++++++++. +|+||+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~---aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEG---VTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTT---CCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhc---CCEEEE
Confidence 579999999999999999999999999999999999998887643110 00 24566788888887 999999
Q ss_pred ecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHH----HHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCCCHH
Q 011931 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTE----RREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGGSFE 154 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~----~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~ 154 (474)
+||+. .++++++++.+.++++++||+++++....+. .+.+.+....+.++..|....+....... .++.+.+++
T Consensus 106 aVp~~-~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via~~~~~ 184 (356)
T 3k96_A 106 VVPSF-AFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQ 184 (356)
T ss_dssp CCCHH-HHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEEESCHH
T ss_pred CCCHH-HHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEecCCHH
Confidence 99985 8999999999999999999999987655432 22333322345667778765543332223 344566899
Q ss_pred HHHHHHHHHHHHhccCCCCCCceEEeCC-----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 011931 155 AYKYIEDILLKVAAQVPDSGPCVTYVSK-----------------GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKL 217 (474)
Q Consensus 155 ~~~~v~~ll~~lg~~~~~~~~~~~~~g~-----------------~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l 217 (474)
..+.++++|+..+.+ ++...+ .|.+..+|+..|...+.+...++|+..++++.| .
T Consensus 185 ~~~~v~~lf~~~~~r-------v~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G-~ 256 (356)
T 3k96_A 185 FSKDLIERLHGQRFR-------VYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFG-G 256 (356)
T ss_dssp HHHHHHHHHCCSSEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred HHHHHHHHhCCCCee-------EEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhC-C
Confidence 999999999876665 233333 245556788899999999999999999999999 9
Q ss_pred CHHHHHHHHHhhccCcch--hhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHH----HHHHHcCCCcccHHH
Q 011931 218 TNEELQNVFTEWNKGELL--SFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTV----QQAADLSVAAPTIEE 290 (474)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~--s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~----~~a~~~gv~~p~~~~ 290 (474)
+++++..+ .|.++ -.+.+..++..+....+..+..++.+.+.++|+-+|..++ +.|+++|+++|+++.
T Consensus 257 ~~~t~~gl-----~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~~ 330 (356)
T 3k96_A 257 KQETLTGL-----AGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQ 330 (356)
T ss_dssp CHHHHTST-----TTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred ChHhhccc-----chhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCCcHHHH
Confidence 99988653 12222 1111111111110001122356677778888888887766 458999999999854
No 38
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.90 E-value=7.8e-24 Score=203.00 Aligned_cols=179 Identities=13% Similarity=0.114 Sum_probs=143.2
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHH--------------HHHHHHhhhhcCCCCccccCCHHHHHhhc
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSK--------------VDETVERAKKEGDLPLFGFRDPESFVNSI 71 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~--------------~~~l~~~~~~~~~~~~~~~~s~~e~~~~l 71 (474)
..+||||||+|.||.+||.+|+++||+|++|||++++ .+++.+.. +...+.+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~e~~~~- 90 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH------PHVHLAAFADVAAG- 90 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGS------TTCEEEEHHHHHHH-
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc------CceeccCHHHHHhc-
Confidence 4579999999999999999999999999999999987 44443321 12346788898888
Q ss_pred CCCcEEEEecCCChhHHHHHHHH-HhcccCCCEEEecCC-----------CCchhHHHHHHHHHH--------cCCeEEe
Q 011931 72 QKPRVIIMLVKAGAPVDETIKTL-SAYMEKGDCIIDGGN-----------EWYENTERREKAMAE--------LGLLYLG 131 (474)
Q Consensus 72 ~~~dvIil~vp~~~~v~~vl~~l-~~~l~~g~iiId~st-----------~~~~~~~~~~~~l~~--------~g~~~v~ 131 (474)
+|+||+|||+. .+.+++.++ .+.+ ++++|||+++ ..|.+.....+.+++ +++.+++
T Consensus 91 --aDvVilavp~~-~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~ 166 (245)
T 3dtt_A 91 --AELVVNATEGA-SSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMN 166 (245)
T ss_dssp --CSEEEECSCGG-GHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSC
T ss_pred --CCEEEEccCcH-HHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccC
Confidence 99999999986 566777777 6777 8999999994 344434344444444 3788899
Q ss_pred cCCCCCcccccCCC-ccccCC-CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHH
Q 011931 132 MGVSGGEEGARHGP-SLMPGG-SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDM 201 (474)
Q Consensus 132 ~pvsgg~~~a~~G~-~i~~gg-~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~ 201 (474)
+|+++++..+..|+ .++++| ++++++.++++|+.+|.+. ++++|+.|+|+.+|+++|.+.....
T Consensus 167 a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~------~~~~G~~g~a~~~k~~~~~~~~l~~ 232 (245)
T 3dtt_A 167 ASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQD------VIDLGDITTARGAEMLLPVWIRLWG 232 (245)
T ss_dssp HHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCC------EEEEESGGGHHHHHTTHHHHHHHHH
T ss_pred HHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCc------eeccCcHHHHHHhhhhHHHHHHHHH
Confidence 99999998888888 677655 6999999999999999642 6899999999999999999876553
No 39
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.87 E-value=5.6e-22 Score=196.25 Aligned_cols=259 Identities=17% Similarity=0.177 Sum_probs=173.2
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCC------CccccCCHHHHHhhcCCCcEEEE
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDL------PLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~------~~~~~~s~~e~~~~l~~~dvIil 79 (474)
+||||+|||+|.||..+|..|+++|++|++|||++++.+.+.+.+...... ++. ..+..++.+.++.+|+||+
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLP-IFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCC-EECGGGCCTTSCCCSEEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecce-eecchhhcccCCCCCEEEE
Confidence 357999999999999999999999999999999999998887654210000 011 1134455443335999999
Q ss_pred ecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHc----CCeEEecCCCCC--cccccCCC-ccc--cC
Q 011931 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL----GLLYLGMGVSGG--EEGARHGP-SLM--PG 150 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~v~~pvsgg--~~~a~~G~-~i~--~g 150 (474)
|||+. .++++++++.+.+.++++||+++++.. ..+.+.+.+.+. |..++++++++. +.....|. .+. .+
T Consensus 81 ~v~~~-~~~~v~~~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~ 158 (316)
T 2ew2_A 81 LTKAQ-QLDAMFKAIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDP 158 (316)
T ss_dssp CSCHH-HHHHHHHHHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESSG
T ss_pred Eeccc-cHHHHHHHHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCC
Confidence 99975 789999999999999999999998764 334444444332 222333334431 22233455 443 35
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH---------------------HHHHHHHHHHHHH
Q 011931 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI---------------------EYGDMQLIAEAYD 209 (474)
Q Consensus 151 g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~---------------------~~~~~~~i~Ea~~ 209 (474)
++++..+.++++|+.++.+ +.+.++.+.+.+.|++.|.+ .....+++.|+..
T Consensus 159 ~~~~~~~~~~~ll~~~g~~-------~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~ 231 (316)
T 2ew2_A 159 SGKKFALEVVDVFQKAGLN-------PSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAA 231 (316)
T ss_dssp GGHHHHHHHHHHHHHTTCC-------EEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHhCCCC-------cEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHH
Confidence 6788899999999999865 46777899999999999964 2557788999999
Q ss_pred HHHHhCCCCH--HHHHHHHHhhccCc--chhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCc
Q 011931 210 VLKSVGKLTN--EELQNVFTEWNKGE--LLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAA 285 (474)
Q Consensus 210 l~~~~G~l~~--~~~~~~~~~~~~~~--~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~ 285 (474)
++++.| +++ +.+.+.+....... ..++ .++..+++ ..++..+ +.+++ | +.++.|+++|+|+
T Consensus 232 la~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~-~sm~~d~~------~~g~~~E-~~~~~-----~-~~~~~a~~~gv~~ 296 (316)
T 2ew2_A 232 VAEKEA-IYLDQAEVYTHIVQTYDPNGIGLHY-PSMYQDLI------KNHRLTE-IDYIN-----G-AVWRKGQKYNVAT 296 (316)
T ss_dssp HHHHTT-CCCCHHHHHHHHHHTTCTTTTTTSC-CHHHHHHT------TTCCCCS-GGGTH-----H-HHHHHHHHHTCCC
T ss_pred HHHHcC-CCCChHHHHHHHHHHhccccCCCCC-cHHHHHHH------HcCCcch-HHHHh-----h-HHHHHHHHhCCCC
Confidence 999999 986 45666664322211 1111 11112220 1112222 33333 3 6889999999999
Q ss_pred ccHH
Q 011931 286 PTIE 289 (474)
Q Consensus 286 p~~~ 289 (474)
|+.+
T Consensus 297 P~~~ 300 (316)
T 2ew2_A 297 PFCA 300 (316)
T ss_dssp HHHH
T ss_pred CHHH
Confidence 9884
No 40
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.87 E-value=4.3e-21 Score=196.80 Aligned_cols=254 Identities=16% Similarity=0.113 Sum_probs=180.4
Q ss_pred CCCcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh---------------hhhcCCCCccccCCHHHHH
Q 011931 4 GKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER---------------AKKEGDLPLFGFRDPESFV 68 (474)
Q Consensus 4 ~~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~---------------~~~~~~~~~~~~~s~~e~~ 68 (474)
+..|.+|+|||+|.||.++|..|+++||+|+++|.++++++.+.+. ....+ ++..++++++++
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g--~l~~tt~~~~ai 95 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSG--RLSFAESAEEAV 95 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTT--CEEECSSHHHHH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcC--CeeEEcCHHHHH
Confidence 4567899999999999999999999999999999999998887531 11111 466788888888
Q ss_pred hhcCCCcEEEEecCCCh---------hHHHHHHHHHhccc---CCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011931 69 NSIQKPRVIIMLVKAGA---------PVDETIKTLSAYME---KGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (474)
Q Consensus 69 ~~l~~~dvIil~vp~~~---------~v~~vl~~l~~~l~---~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsg 136 (474)
+. +|++|+|||++. .++++.+.+.+.++ ++++||..||++|++++++...+.+....-.+..+..
T Consensus 96 ~~---ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~ 172 (444)
T 3vtf_A 96 AA---TDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVAS 172 (444)
T ss_dssp HT---SSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEE
T ss_pred hc---CCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeec
Confidence 87 999999998762 46777788877774 6899999999999999887654432211112233444
Q ss_pred CcccccCCC---------ccccCC-CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011931 137 GEEGARHGP---------SLMPGG-SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAE 206 (474)
Q Consensus 137 g~~~a~~G~---------~i~~gg-~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~E 206 (474)
.|+..++|. .++.|+ ++.+.+.+..+++.+... ++. ....+|+++|++.|.+.+..+++++|
T Consensus 173 ~PErl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~-------~~~-~~~~~AE~~Kl~eN~~ravnIa~~NE 244 (444)
T 3vtf_A 173 NPEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAP-------KLV-MKPREAELVKYASNVFLALKISFANE 244 (444)
T ss_dssp CCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSC-------EEE-ECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCC-------EEE-echhHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666664 345565 677778888888766432 333 45689999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcc
Q 011931 207 AYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAP 286 (474)
Q Consensus 207 a~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p 286 (474)
...+|++.| +|..++.+.+.. ....+ ...+.-+-.+++ + =+-+|.. .....|+++|++.+
T Consensus 245 la~ice~~G-iDv~eV~~a~~~--d~rig-------~~~l~PG~G~GG-~---CipkD~~------~L~~~a~~~g~~~~ 304 (444)
T 3vtf_A 245 VGLLAKRLG-VDTYRVFEAVGL--DKRIG-------RHYFGAGLGFGG-S---CFPKDTL------AFIRFGESLGLEMA 304 (444)
T ss_dssp HHHHHHHTT-CCHHHHHHHHHT--STTSC-------STTCCCSSCCCT-T---THHHHHH------HHHHHHHHTTCCCH
T ss_pred HHHHHHHcC-CCHHHHHHHhcc--CCCCC-------CCCCCCCCCCCC-c---ccCcCHH------HHHHHHHhcCCCHH
Confidence 999999999 999999888731 01111 011111101222 1 1233432 45577999999999
Q ss_pred cHHH
Q 011931 287 TIEE 290 (474)
Q Consensus 287 ~~~~ 290 (474)
++..
T Consensus 305 li~a 308 (444)
T 3vtf_A 305 ISKA 308 (444)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8843
No 41
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.85 E-value=1.6e-20 Score=186.40 Aligned_cols=195 Identities=14% Similarity=0.200 Sum_probs=145.6
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-------hcC---C--------CCccccCCHHH
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------KEG---D--------LPLFGFRDPES 66 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------~~~---~--------~~~~~~~s~~e 66 (474)
..++||+|||+|.||.+||.+|+++||+|++||+++++++++.+... ..| + .+++.++++++
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 45678999999999999999999999999999999998887754210 000 0 02466788988
Q ss_pred HHhhcCCCcEEEEecCCChhHH-HHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCCcccc
Q 011931 67 FVNSIQKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEGA 141 (474)
Q Consensus 67 ~~~~l~~~dvIil~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~v~~pvsgg~~~a 141 (474)
+++. ||+||+|||+..+++ .++.++.+.++++.+|++.+++.+.. ++++.+.. .|.||++.| .
T Consensus 84 av~~---aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~--~la~~~~~~~r~ig~Hp~~P~-~------ 151 (319)
T 2dpo_A 84 AVEG---VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS--KLFTGLAHVKQCIVAHPVNPP-Y------ 151 (319)
T ss_dssp HTTT---EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH--HHHTTCTTGGGEEEEEECSST-T------
T ss_pred HHhc---CCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHH--HHHHhcCCCCCeEEeecCCch-h------
Confidence 8887 999999999875554 56688999999999998877765432 44443321 245666543 1
Q ss_pred cCCC--ccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 011931 142 RHGP--SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKL 217 (474)
Q Consensus 142 ~~G~--~i~~g--g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l 217 (474)
.++ .+++| ++++.+++++++++.+|.+ +++++..+.|+ ++ |.+. ..+++|++.++++.+ +
T Consensus 152 -~~~lveiv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~~~~~Gf---i~-Nrll---~a~~~EA~~l~~~g~-~ 215 (319)
T 2dpo_A 152 -YIPLVELVPHPETSPATVDRTHALMRKIGQS-------PVRVLKEIDGF---VL-NRLQ---YAIISEAWRLVEEGI-V 215 (319)
T ss_dssp -TCCEEEEEECTTCCHHHHHHHHHHHHHTTCE-------EEECSSCCTTT---TH-HHHH---HHHHHHHHHHHHTTS-S
T ss_pred -hcceEEEeCCCCCCHHHHHHHHHHHHHcCCE-------EEEECCCcCCc---hH-HHHH---HHHHHHHHHHHHhCC-C
Confidence 122 46777 7999999999999999976 48888778886 33 4443 346899999999988 9
Q ss_pred CHHHHHHHHH
Q 011931 218 TNEELQNVFT 227 (474)
Q Consensus 218 ~~~~~~~~~~ 227 (474)
+++++.+++.
T Consensus 216 ~~~~id~a~~ 225 (319)
T 2dpo_A 216 SPSDLDLVMS 225 (319)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999999973
No 42
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.85 E-value=3.8e-20 Score=178.52 Aligned_cols=232 Identities=14% Similarity=0.098 Sum_probs=166.3
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
+||||+|||+|.||..++.+|.+.|++|.+|||++++.+++.+.. ++..+.+++++++. +|+||+|+|+ .
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~---~D~Vi~~v~~-~ 71 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------ALPYAMSHQDLIDQ---VDLVILGIKP-Q 71 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------TCCBCSSHHHHHHT---CSEEEECSCG-G
T ss_pred CccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc------CCEeeCCHHHHHhc---CCEEEEEeCc-H
Confidence 467999999999999999999999999999999999998887653 14567788898887 9999999995 4
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCC--CHHHHHHHHHH
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGG--SFEAYKYIEDI 162 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg--~~~~~~~v~~l 162 (474)
.+.+++.+ +.++++||+.+++.+.. .+.+.+ ..+.++++ ++.+.+.....|. .+++++ +++.++.++++
T Consensus 72 ~~~~v~~~----l~~~~~vv~~~~~~~~~--~l~~~~-~~~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l 143 (259)
T 2ahr_A 72 LFETVLKP----LHFKQPIISMAAGISLQ--RLATFV-GQDLPLLR-IMPNMNAQILQSSTALTGNALVSQELQARVRDL 143 (259)
T ss_dssp GHHHHHTT----SCCCSCEEECCTTCCHH--HHHHHH-CTTSCEEE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHH
T ss_pred hHHHHHHH----hccCCEEEEeCCCCCHH--HHHHhc-CCCCCEEE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHH
Confidence 67776654 34788999997655432 333333 34566776 5666666666777 566766 88999999999
Q ss_pred HHHHhccCCCCCCceEEeCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchhh-hH
Q 011931 163 LLKVAAQVPDSGPCVTYVSKGGSGNFVKMI--HNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLSF-LI 239 (474)
Q Consensus 163 l~~lg~~~~~~~~~~~~~g~~g~g~~~K~v--~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~-~~ 239 (474)
|+.+| + ++++++.....++++. .|.+.+.++..++|+ +.+.| ++++++.+++. .+...++ ++
T Consensus 144 l~~~G-~-------~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~---~~~~G-l~~~~~~~~~~---~~~~~~~~~~ 208 (259)
T 2ahr_A 144 TDSFG-S-------TFDISEKDFDTFTALAGSSPAYIYLFIEALAKA---GVKNG-IPKAKALEIVT---QTVLASASNL 208 (259)
T ss_dssp HHTTE-E-------EEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH---HHHHHHHHHH
T ss_pred HHhCC-C-------EEEecHHHccHHHHHhccHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH---HHHHHHHHHH
Confidence 99998 4 4788876666666653 355666677777777 67888 99999998874 3333444 33
Q ss_pred hhhc--ccccccccCCCcchHHHHhhhcCCCcc
Q 011931 240 EITA--DIFGIKDDKGDGYLVDKVLDKTGMKGT 270 (474)
Q Consensus 240 ~~~~--~~l~~~~~~~~~~~~~~i~~~~~~k~t 270 (474)
.... +.+..++.++|++.+...++++++.|.
T Consensus 209 ~~~~~~p~~l~~~~~~p~~~~~~~~~~l~~~g~ 241 (259)
T 2ahr_A 209 KTSSQSPHDFIDAICSPGGTTIAGLMELERLGL 241 (259)
T ss_dssp HHSSSCHHHHHHHHCCTTSHHHHHHHHHHHHTH
T ss_pred HhcCCCHHHHHHhCCCCChhHHHHHHHHHHCCh
Confidence 3221 222222335778888888887754333
No 43
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.84 E-value=1e-20 Score=185.15 Aligned_cols=186 Identities=12% Similarity=0.195 Sum_probs=138.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||.+||.+|+ +|++|++||+++++++++.+......--+++.++++++ ++. ||+||.|+|++.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~---aDlVieavpe~~~ 86 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKD---CDIVMEAVFEDLN 86 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGG---CSEEEECCCSCHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcC---CCEEEEcCcCCHH
Confidence 368999999999999999999 99999999999999988877510000002566778877 666 9999999999988
Q ss_pred HHHHH-HHHHhcccCCCEEE-ecCCCCchhHHHHHH-HHHHcCCeEEecCCCCCcccccCCC--ccccC--CCHHHHHHH
Q 011931 87 VDETI-KTLSAYMEKGDCII-DGGNEWYENTERREK-AMAELGLLYLGMGVSGGEEGARHGP--SLMPG--GSFEAYKYI 159 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiI-d~st~~~~~~~~~~~-~l~~~g~~~v~~pvsgg~~~a~~G~--~i~~g--g~~~~~~~v 159 (474)
++.++ .++.+ + ++.+++ |+||.++....+... ..+..|.||++ |+.+ ++ .++.| +++++++++
T Consensus 87 vk~~l~~~l~~-~-~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~-Pv~~-------~~lveiv~g~~t~~~~~~~~ 156 (293)
T 1zej_A 87 TKVEVLREVER-L-TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMN-PPHV-------MPLVEIVISRFTDSKTVAFV 156 (293)
T ss_dssp HHHHHHHHHHT-T-CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECS-STTT-------CCEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHhc-C-CCCEEEEECCCcCHHHHHHHhhcccceEeEEecC-cccc-------CCEEEEECCCCCCHHHHHHH
Confidence 88776 55544 4 888886 566766543222111 11124778888 5543 33 46666 489999999
Q ss_pred HHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011931 160 EDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVF 226 (474)
Q Consensus 160 ~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~ 226 (474)
+++++.+|++ ++++++. |+++|.+. .+++|++.++++ | ++++++.+++
T Consensus 157 ~~l~~~lGk~-------~v~v~d~------fi~Nrll~----~~~~EA~~l~~~-G-v~~e~id~~~ 204 (293)
T 1zej_A 157 EGFLRELGKE-------VVVCKGQ------SLVNRFNA----AVLSEASRMIEE-G-VRAEDVDRVW 204 (293)
T ss_dssp HHHHHHTTCE-------EEEEESS------CHHHHHHH----HHHHHHHHHHHH-T-CCHHHHHHHH
T ss_pred HHHHHHcCCe-------EEEeccc------ccHHHHHH----HHHHHHHHHHHh-C-CCHHHHHHHH
Confidence 9999999976 4788754 56655543 578999999999 8 8999999987
No 44
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.84 E-value=1.2e-20 Score=182.80 Aligned_cols=198 Identities=18% Similarity=0.168 Sum_probs=152.0
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCc-EEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFP-ISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
.+|+|+|||+|.||..++..|++.|++ |.+|||++++.+++.+.. ++..+.+++++++. +|+||+|+|+.
T Consensus 9 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~---~Dvvi~av~~~ 79 (266)
T 3d1l_A 9 EDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV------EAEYTTDLAEVNPY---AKLYIVSLKDS 79 (266)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT------TCEEESCGGGSCSC---CSEEEECCCHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc------CCceeCCHHHHhcC---CCEEEEecCHH
Confidence 357999999999999999999999999 899999999998887652 24566788887666 99999999986
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccc-cCCCHHHHHHHHHHH
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLM-PGGSFEAYKYIEDIL 163 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~-~gg~~~~~~~v~~ll 163 (474)
.++++++++.+.++++++||+++++.+.+. +.+.+...+..+..+|++|++.....+..++ .+++++.++.++++|
T Consensus 80 -~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 156 (266)
T 3d1l_A 80 -AFAELLQGIVEGKREEALMVHTAGSIPMNV--WEGHVPHYGVFYPMQTFSKQREVDFKEIPFFIEASSTEDAAFLKAIA 156 (266)
T ss_dssp -HHHHHHHHHHTTCCTTCEEEECCTTSCGGG--STTTCSSEEEEEECCCC---CCCCCTTCCEEEEESSHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhhcCCCcEEEECCCCCchHH--HHHHHHhccCcCCceecCCCchhhcCCCeEEEecCCHHHHHHHHHHH
Confidence 678899999888889999999999987544 3333333345566778877654333333444 488999999999999
Q ss_pred HHHhccCCCCCCceEEeCCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011931 164 LKVAAQVPDSGPCVTYVSKGG---SGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFT 227 (474)
Q Consensus 164 ~~lg~~~~~~~~~~~~~g~~g---~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~ 227 (474)
+.+|.+ ++++++.+ -..++|+++|.. ..+..++|+ ++++.| ++++++.+++.
T Consensus 157 ~~~g~~-------~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l~~~~G-l~~~~~~~l~~ 211 (266)
T 3d1l_A 157 STLSNR-------VYDADSEQRKSLHLAAVFTCNFT--NHMYALAAE--LLKKYN-LPFDVMLPLID 211 (266)
T ss_dssp HTTCSC-------EEECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHTT-CCGGGGHHHHH
T ss_pred HhcCCc-------EEEeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHcC-CCHHHHHHHHH
Confidence 999865 57888755 456789999984 345666776 568888 99999888874
No 45
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.84 E-value=1.8e-20 Score=183.60 Aligned_cols=198 Identities=11% Similarity=0.120 Sum_probs=159.1
Q ss_pred CcCcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 6 QLTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 6 ~~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
+||+|+|||+ |.||..+|.+|+++|++|++|||++++.+.+.+.+ +.. .++.++++. +|+||+|||+.
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-------~~~-~~~~~~~~~---aDvVi~av~~~ 78 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMG-------IPL-TDGDGWIDE---ADVVVLALPDN 78 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTT-------CCC-CCSSGGGGT---CSEEEECSCHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcC-------CCc-CCHHHHhcC---CCEEEEcCCch
Confidence 4579999999 99999999999999999999999999988876632 333 356676666 99999999986
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE-ecCCCCCc------ccccCC-------C-c--c
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL-GMGVSGGE------EGARHG-------P-S--L 147 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v-~~pvsgg~------~~a~~G-------~-~--i 147 (474)
.++++++++.+.+.++.+|||+|+..+.. .+.+ + ..+..|+ .+|++|++ .....| . . +
T Consensus 79 -~~~~v~~~l~~~l~~~~ivv~~s~~~~~~--~l~~-~-~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~ 153 (286)
T 3c24_A 79 -IIEKVAEDIVPRVRPGTIVLILDAAAPYA--GVMP-E-RADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCA 153 (286)
T ss_dssp -HHHHHHHHHGGGSCTTCEEEESCSHHHHH--TCSC-C-CTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEE
T ss_pred -HHHHHHHHHHHhCCCCCEEEECCCCchhH--HHHh-h-hCCCeEEecCCCCccccccccchhhccCcccccccceeeee
Confidence 58999999999899999999988876322 2222 2 2367888 78999887 445666 2 2 2
Q ss_pred ccCCCHHHHHHHHHHHHHHhc---cCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHH
Q 011931 148 MPGGSFEAYKYIEDILLKVAA---QVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV-GKLTNEELQ 223 (474)
Q Consensus 148 ~~gg~~~~~~~v~~ll~~lg~---~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~-G~l~~~~~~ 223 (474)
..+++++.++.++++|+.+|. + ++++++.+.+.+.|.+.|+.....+..++|++..+... | ++.+++.
T Consensus 154 ~~~~~~~~~~~v~~l~~~~G~~~~~-------~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~G-l~~~~~~ 225 (286)
T 3c24_A 154 LMQGPEEHYAIGADICETMWSPVTR-------THRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYG-IDRQAAL 225 (286)
T ss_dssp EEESCTHHHHHHHHHHHHHTCSEEE-------EEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHC-CCHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHhcCCcce-------EEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHH
Confidence 356889999999999999997 4 58888877777779999988889999999988766555 8 9999998
Q ss_pred HHHH
Q 011931 224 NVFT 227 (474)
Q Consensus 224 ~~~~ 227 (474)
+++.
T Consensus 226 ~~~~ 229 (286)
T 3c24_A 226 DFMI 229 (286)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 46
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.83 E-value=1.6e-20 Score=186.11 Aligned_cols=252 Identities=15% Similarity=0.157 Sum_probs=166.4
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC-----C-CcEEEEeCChHHHHHHHH-hhhhcCC-------CCccccCCHHHHHhhc
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK-----G-FPISVYNRTTSKVDETVE-RAKKEGD-------LPLFGFRDPESFVNSI 71 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~-----G-~~V~v~dr~~~~~~~l~~-~~~~~~~-------~~~~~~~s~~e~~~~l 71 (474)
++|||+|||+|.||..+|.+|+++ | ++|++||| +++.+.+.+ .+..... .++..+++ .+.+..
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~- 83 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDN-PAEVGT- 83 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESC-HHHHCC-
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecC-ccccCC-
Confidence 346899999999999999999999 9 99999999 888888876 4321000 00111133 344555
Q ss_pred CCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCC-C-cccccCCC
Q 011931 72 QKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSG-G-EEGARHGP 145 (474)
Q Consensus 72 ~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~v~~pvsg-g-~~~a~~G~ 145 (474)
+|+||+|||+. +++++++++.+.+.++++||+++++. ...+.+.+.+.. .|+.++++++++ | ......|.
T Consensus 84 --~D~vil~vk~~-~~~~v~~~i~~~l~~~~~iv~~~nG~-~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~ 159 (317)
T 2qyt_A 84 --VDYILFCTKDY-DMERGVAEIRPMIGQNTKILPLLNGA-DIAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADRE 159 (317)
T ss_dssp --EEEEEECCSSS-CHHHHHHHHGGGEEEEEEEEECSCSS-SHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEE
T ss_pred --CCEEEEecCcc-cHHHHHHHHHhhcCCCCEEEEccCCC-CcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCc
Confidence 99999999997 68999999999998899999998875 333444444433 344566777664 2 22233444
Q ss_pred cc-c----cCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHH-------------------HHH
Q 011931 146 SL-M----PGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEY-------------------GDM 201 (474)
Q Consensus 146 ~i-~----~gg~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~-------------------~~~ 201 (474)
.. + .+++.+.+ .+.++|+..+.+ +.+.++.+.+.+.|++.|.... ...
T Consensus 160 ~~~ig~~~~~~~~~~~-~~~~ll~~~g~~-------~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~ 231 (317)
T 2qyt_A 160 LFYFGSGLPEQTDDEV-RLAELLTAAGIR-------AYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELL 231 (317)
T ss_dssp EEEEECCSSSCCHHHH-HHHHHHHHTTCC-------EECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHH
T ss_pred eEEEcCCCCCCcCHHH-HHHHHHHHCCCC-------CEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHH
Confidence 33 3 33457777 899999998865 4777889999999999998754 455
Q ss_pred HHHHHHHHHHHHhCCCCHH--HHHHHHHhhccCcchhhhHhhhcccccccccCCCcch--HHHHhhhcCCCccHHHHHHH
Q 011931 202 QLIAEAYDVLKSVGKLTNE--ELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYL--VDKVLDKTGMKGTGKWTVQQ 277 (474)
Q Consensus 202 ~~i~Ea~~l~~~~G~l~~~--~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~--~~~i~~~~~~k~tg~~~~~~ 277 (474)
+++.|+..++++.| ++.+ .+.+++....... .....++..+ +..++. ++.+ .| ++++.
T Consensus 232 ~~~~E~~~v~~a~G-~~~~~~~~~~~~~~~~~~~-~~~~~sm~~d-------~~~g~~~E~~~~--------~g-~~~~~ 293 (317)
T 2qyt_A 232 SLLEEVAELFRAKY-GQVPDDVVQQLLDKQRKMP-PESTSSMHSD-------FLQGGSTEVETL--------TG-YVVRE 293 (317)
T ss_dssp HHHHHHHHHHHHHT-SCCCSSHHHHHHHHHHHC----------------------------CTT--------TH-HHHHH
T ss_pred HHHHHHHHHHHHcC-CCCChHHHHHHHHHHhccC-CCCCChHHHH-------HHcCCccCHHHH--------hh-HHHHH
Confidence 89999999999999 9864 5666654321100 0001111112 222221 2222 23 68899
Q ss_pred HHHcCCCcccHHH
Q 011931 278 AADLSVAAPTIEE 290 (474)
Q Consensus 278 a~~~gv~~p~~~~ 290 (474)
|+++|+|+|..+.
T Consensus 294 a~~~gv~~P~~~~ 306 (317)
T 2qyt_A 294 AEALRVDLPMYKR 306 (317)
T ss_dssp HHHTTCCCHHHHH
T ss_pred HHHcCCCCCHHHH
Confidence 9999999998743
No 47
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.82 E-value=3.1e-21 Score=188.77 Aligned_cols=250 Identities=18% Similarity=0.248 Sum_probs=166.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCC-CCcc-ccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGD-LPLF-GFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~-~~~~-~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
|||+|||+|.||..+|.+|+++|++|++|||++++.+.+...+.. +. .... ..++ .+.++. +|+||+|||+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~-~~~~~~---~d~vi~~v~~~- 74 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETD-GSIFNESLTAND-PDFLAT---SDLLLVTLKAW- 74 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTT-SCEEEEEEEESC-HHHHHT---CSEEEECSCGG-
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCC-CceeeeeeeecC-ccccCC---CCEEEEEecHH-
Confidence 589999999999999999999999999999998765443221100 00 0001 1233 455565 99999999996
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH--cCCeEEecCCCCC-cccccCCC-cccc-CCCHHHHHHHH
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE--LGLLYLGMGVSGG-EEGARHGP-SLMP-GGSFEAYKYIE 160 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~--~g~~~v~~pvsgg-~~~a~~G~-~i~~-gg~~~~~~~v~ 160 (474)
.++++++++.+.+.++++||+++++. ...+.+.+.+.+ .|..+.++...+. +..+..|. .+.+ +++++.++.++
T Consensus 75 ~~~~v~~~l~~~l~~~~~vv~~~~g~-~~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~g~~~i~~~~~~~~~~~~~~ 153 (291)
T 1ks9_A 75 QVSDAVKSLASTLPVTTPILLIHNGM-GTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLA 153 (291)
T ss_dssp GHHHHHHHHHTTSCTTSCEEEECSSS-CTTGGGTTCCSCEEEEEECCEEEEETTEEEEEECCCEEEEESSGGGTTCTHHH
T ss_pred hHHHHHHHHHhhCCCCCEEEEecCCC-CcHHHHHHhcCCeEEEEEeEccEEcCCEEEEecccceEEccCCCCcchHHHHH
Confidence 68999999999999999999998865 232333333322 1222211112221 33445666 4444 45677788999
Q ss_pred HHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHhCCCCH--H
Q 011931 161 DILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIE------------------YGDMQLIAEAYDVLKSVGKLTN--E 220 (474)
Q Consensus 161 ~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~------------------~~~~~~i~Ea~~l~~~~G~l~~--~ 220 (474)
++|+.++.+ +.+.++.+.+.+.|++.|... ....+++.|+..++++.| ++. +
T Consensus 154 ~ll~~~g~~-------~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G-~~~~~~ 225 (291)
T 1ks9_A 154 DILQTVLPD-------VAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREG-HHTSAE 225 (291)
T ss_dssp HHHHTTSSC-------EEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHT-CCCCHH
T ss_pred HHHHhcCCC-------CeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcC-CCCCHH
Confidence 999998865 577888999999999999887 678899999999999999 886 4
Q ss_pred HHHHHHHhh-cc-CcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 221 ELQNVFTEW-NK-GELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 221 ~~~~~~~~~-~~-~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
.+.+.+..+ .. ....|.+. .++...+. ..++.+ .| ++++.|+++|+|+|+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~ssm~---~d~~~g~~-----~e~~~~--------~g-~~~~~a~~~gv~~P~~~ 279 (291)
T 1ks9_A 226 DLRDYVMQVIDATAENISSML---QDIRALRH-----TEIDYI--------NG-FLLRRARAHGIAVPENT 279 (291)
T ss_dssp HHHHHHHHHHHHTTTCCCHHH---HHHHTTCC-----CSGGGT--------HH-HHHHHHHHHTCCCHHHH
T ss_pred HHHHHHHHHHhcCCCCCChHH---HHHHcCCc-----cHHHHH--------HH-HHHHHHHHhCCCCCHHH
Confidence 543332221 11 11222222 23322111 122222 34 68899999999999874
No 48
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.82 E-value=7.3e-21 Score=190.64 Aligned_cols=199 Identities=14% Similarity=0.085 Sum_probs=139.1
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc---C-CCCccccCCHHHHHhhcCCCcEEEEec
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE---G-DLPLFGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~---~-~~~~~~~~s~~e~~~~l~~~dvIil~v 81 (474)
+.|||+|||+|.||+.||.+|+++|++|++|||++++++.+.+.+... + ..++..++++++ +.. +|+||+||
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~---aDvVil~v 88 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKK---EDILVIAI 88 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCT---TEEEEECS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcC---CCEEEEEC
Confidence 457999999999999999999999999999999999999888764210 0 001355677777 666 99999999
Q ss_pred CCChhHHHHHHHHHhcccCCCEEEecCCCCc-hhHHHHHHHHHHcCCeEEecCCCCCccccc---CCC-c-cccCCCHHH
Q 011931 82 KAGAPVDETIKTLSAYMEKGDCIIDGGNEWY-ENTERREKAMAELGLLYLGMGVSGGEEGAR---HGP-S-LMPGGSFEA 155 (474)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~---~G~-~-i~~gg~~~~ 155 (474)
|+ .++++++.++.+ ++++||+++++.. .+.+.+.+.+.+.. . .+.++..+|..+. .|. . +..|+++
T Consensus 89 k~-~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~-~-~~~~~~~~P~~~~~~~~g~~~~~~~g~~~-- 160 (335)
T 1z82_A 89 PV-QYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEIL-G-CPYAVLSGPSHAEEVAKKLPTAVTLAGEN-- 160 (335)
T ss_dssp CG-GGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHT-C-CCEEEEESSCCHHHHHTTCCEEEEEEETT--
T ss_pred CH-HHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHc-C-CceEEEECCccHHHHhCCCceEEEEEehh--
Confidence 97 689999877665 7899999997643 33344555544321 1 2233333333332 454 3 3444433
Q ss_pred HHHHHHHHHHHhccCCCCCCceEEeCCc-----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 011931 156 YKYIEDILLKVAAQVPDSGPCVTYVSKG-----------------GSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLT 218 (474)
Q Consensus 156 ~~~v~~ll~~lg~~~~~~~~~~~~~g~~-----------------g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~ 218 (474)
.+.++++|+..+.+ +++.++. |.+..+|+.+|.+......++.|+..++++.| ++
T Consensus 161 ~~~~~~ll~~~g~~-------~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G-~~ 232 (335)
T 1z82_A 161 SKELQKRISTEYFR-------VYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFG-AD 232 (335)
T ss_dssp HHHHHHHHCCSSEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT-CC
T ss_pred HHHHHHHhCCCCEE-------EEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhC-CC
Confidence 78899999887765 3444432 22233456678888888999999999999999 99
Q ss_pred HHHHHH
Q 011931 219 NEELQN 224 (474)
Q Consensus 219 ~~~~~~ 224 (474)
++++.+
T Consensus 233 ~~~~~~ 238 (335)
T 1z82_A 233 QKTFMG 238 (335)
T ss_dssp HHHHTS
T ss_pred hhhhcc
Confidence 887654
No 49
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.82 E-value=1.5e-20 Score=190.55 Aligned_cols=201 Identities=13% Similarity=0.073 Sum_probs=143.2
Q ss_pred cEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcC---C----CCccccCCHHHHHhhcCCCcEEEEec
Q 011931 9 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEG---D----LPLFGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 9 ~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~---~----~~~~~~~s~~e~~~~l~~~dvIil~v 81 (474)
||+|||+|.||..||.+|+++||+|++|||++++++.+.+.+.... + .++..+++++++++. +|+||+||
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---aDvVilav 93 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG---AEIILFVI 93 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT---CSSEEECC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcC---CCEEEECC
Confidence 8999999999999999999999999999999999988876541100 0 024556788888877 99999999
Q ss_pred CCChhHHHHHHH----HHhcccC-CCEEEecCCCCch-hHHHHHHHHHHc-CC---eEEecCCCCCcccccCCC---ccc
Q 011931 82 KAGAPVDETIKT----LSAYMEK-GDCIIDGGNEWYE-NTERREKAMAEL-GL---LYLGMGVSGGEEGARHGP---SLM 148 (474)
Q Consensus 82 p~~~~v~~vl~~----l~~~l~~-g~iiId~st~~~~-~~~~~~~~l~~~-g~---~~v~~pvsgg~~~a~~G~---~i~ 148 (474)
|+ ..+++++.+ +.+.+.+ +++||+++++... ..+.+.+.+.+. +. .++.+|..... ...|. .++
T Consensus 94 ~~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~--~~~g~~~~~~~ 170 (366)
T 1evy_A 94 PT-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIE--VATGVFTCVSI 170 (366)
T ss_dssp CH-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHH--HHTTCCEEEEE
T ss_pred Ch-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHH--HHhCCceEEEE
Confidence 97 588999988 9888888 9999999965433 233334444332 32 23333432211 11333 234
Q ss_pred cCCCHHHHHHHHHHHHHH--hccCCCCCCceEEeCCch---hHHH--------------HHHHHHHHHHHHHHHHHHHHH
Q 011931 149 PGGSFEAYKYIEDILLKV--AAQVPDSGPCVTYVSKGG---SGNF--------------VKMIHNGIEYGDMQLIAEAYD 209 (474)
Q Consensus 149 ~gg~~~~~~~v~~ll~~l--g~~~~~~~~~~~~~g~~g---~g~~--------------~K~v~N~~~~~~~~~i~Ea~~ 209 (474)
.+++++..+.++++|+.. +.+ +++.++.- -+.+ +|+.+|.+......+++|+..
T Consensus 171 ~~~~~~~~~~v~~ll~~~g~g~~-------~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~ 243 (366)
T 1evy_A 171 ASADINVARRLQRIMSTGDRSFV-------CWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRD 243 (366)
T ss_dssp ECSSHHHHHHHHHHHSCTTSSEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHhcCCCCeEE-------EEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHH
Confidence 566888899999999988 654 35555432 2222 345578888889999999999
Q ss_pred HHHHhCCCCHHHHH
Q 011931 210 VLKSVGKLTNEELQ 223 (474)
Q Consensus 210 l~~~~G~l~~~~~~ 223 (474)
++++.| ++++++.
T Consensus 244 la~a~G-i~~~~~~ 256 (366)
T 1evy_A 244 LTAALG-GDGSAVF 256 (366)
T ss_dssp HHHHTT-CCCTTTT
T ss_pred HHHHhC-CCCcccc
Confidence 999999 9987654
No 50
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.81 E-value=1.1e-18 Score=173.85 Aligned_cols=195 Identities=14% Similarity=0.136 Sum_probs=142.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC----CcEEEEeCChH--HHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG----FPISVYNRTTS--KVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G----~~V~v~dr~~~--~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
+|||+|||+|.||.+||.+|+++| ++|++|||+++ +.+++.+.+ +..+.++.++++. +|+||+|
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G-------~~~~~~~~e~~~~---aDvVila 91 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMG-------VKLTPHNKETVQH---SDVLFLA 91 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHT-------CEEESCHHHHHHH---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcC-------CEEeCChHHHhcc---CCEEEEE
Confidence 578999999999999999999999 89999999986 777776443 5567788888888 9999999
Q ss_pred cCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHc--CCeEEecCCCCCcccccCCCccccCCC---HHH
Q 011931 81 VKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL--GLLYLGMGVSGGEEGARHGPSLMPGGS---FEA 155 (474)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~--g~~~v~~pvsgg~~~a~~G~~i~~gg~---~~~ 155 (474)
||+ ..+++++.++.+.+.++++||+++++.+. ..+.+.+.+. +.+++.+.. ..+.....|..++.+|+ ++.
T Consensus 92 v~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~~--~~l~~~l~~~~~~~~vv~~~p-~~p~~~~~g~~v~~~g~~~~~~~ 167 (322)
T 2izz_A 92 VKP-HIIPFILDEIGADIEDRHIVVSCAAGVTI--SSIEKKLSAFRPAPRVIRCMT-NTPVVVREGATVYATGTHAQVED 167 (322)
T ss_dssp SCG-GGHHHHHHHHGGGCCTTCEEEECCTTCCH--HHHHHHHHTTSSCCEEEEEEC-CGGGGGTCEEEEEEECTTCCHHH
T ss_pred eCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCCH--HHHHHHHhhcCCCCeEEEEeC-CcHHHHcCCeEEEEeCCCCCHHH
Confidence 996 58999999999989899999999887653 3455555542 345554322 22223334445665665 788
Q ss_pred HHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011931 156 YKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKM--IHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFT 227 (474)
Q Consensus 156 ~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~--v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~ 227 (474)
++.++++|+.+|.. +++.+.....+..+ ..+.+.+.++..++|+ +.+.| ++++++.+++.
T Consensus 168 ~~~v~~ll~~~G~~--------~~~~e~~~~~~~a~~g~gpa~~~~~~eala~a---~~~~G-l~~~~a~~l~~ 229 (322)
T 2izz_A 168 GRLMEQLLSSVGFC--------TEVEEDLIDAVTGLSGSGPAYAFTALDALADG---GVKMG-LPRRLAVRLGA 229 (322)
T ss_dssp HHHHHHHHHTTEEE--------EECCGGGHHHHHHHTTTHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCE--------EEeCHHHHHHHHHHhcCHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH
Confidence 99999999999964 34444322223222 2245556666666666 57788 99999888874
No 51
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.81 E-value=2.3e-19 Score=173.33 Aligned_cols=227 Identities=14% Similarity=0.118 Sum_probs=159.4
Q ss_pred CcEEEEcccHhHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
|||+|||+|.||..+|.+|+++| ++|++|||++++.+++.+.. ++..+.++.+++ . +|+||+||| +..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~------g~~~~~~~~~~~-~---~D~vi~~v~-~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL------GVETSATLPELH-S---DDVLILAVK-PQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT------CCEEESSCCCCC-T---TSEEEECSC-HHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhc------CCEEeCCHHHHh-c---CCEEEEEeC-chh
Confidence 58999999999999999999999 99999999999998887652 245566777766 6 999999999 568
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-ccccCC--CHHHHHHHHHHH
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-SLMPGG--SFEAYKYIEDIL 163 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~i~~gg--~~~~~~~v~~ll 163 (474)
+++++.++.+ + +++||+++++.+. ..+.+.+. .+.+++.+ +.+.+.....|. .+++++ +++.++.++++|
T Consensus 70 ~~~v~~~l~~--~-~~ivv~~~~g~~~--~~l~~~~~-~~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~ 142 (263)
T 1yqg_A 70 MEAACKNIRT--N-GALVLSVAAGLSV--GTLSRYLG-GTRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIM 142 (263)
T ss_dssp HHHHHTTCCC--T-TCEEEECCTTCCH--HHHHHHTT-SCCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHhcc--C-CCEEEEecCCCCH--HHHHHHcC-CCCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHH
Confidence 8888877655 4 8999999665543 34444443 35678887 666666666676 577777 889999999999
Q ss_pred HHHhccCCCCCCceEEeC-C---------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccCc
Q 011931 164 LKVAAQVPDSGPCVTYVS-K---------GGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFTEWNKGE 233 (474)
Q Consensus 164 ~~lg~~~~~~~~~~~~~g-~---------~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~ 233 (474)
+.+|.+ ++++ + .|++. .+.+..+..+.|+ +++.| ++++++.+++... .
T Consensus 143 ~~~g~~--------~~~~~~~~~~~~~al~g~~~-------~~~~~~~~~l~e~---~~~~G-~~~~~~~~~~~~~---~ 200 (263)
T 1yqg_A 143 KSVGLT--------VWLDDEEKMHGITGISGSGP-------AYVFYLLDALQNA---AIRQG-FDMAEARALSLAT---F 200 (263)
T ss_dssp HTTEEE--------EECSSTTHHHHHHHHTTSHH-------HHHHHHHHHHHHH---HHHTT-CCHHHHHHHHHHH---H
T ss_pred HhCCCE--------EEeCChhhccHHHHHHccHH-------HHHHHHHHHHHHH---HHHcC-CCHHHHHHHHHHH---H
Confidence 999864 3676 4 23332 3345556666676 77888 9999988887432 2
Q ss_pred chhh-hHhhhc--c-cccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccH
Q 011931 234 LLSF-LIEITA--D-IFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTI 288 (474)
Q Consensus 234 ~~s~-~~~~~~--~-~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~ 288 (474)
.++. ++.... + .+.. ..+++++.+...++++ ++.|++.|+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l-------------~~~~~~~~~~ 245 (263)
T 1yqg_A 201 KGAVALAEQTGEDFEKLQK-NVTSKGGTTHEAVEAF-------------RRHRVAEAIS 245 (263)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HTCCTTSHHHHHHHHH-------------HHTTHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHH-hcCCCChhHHHHHHHH-------------HHCCHHHHHH
Confidence 2222 332221 2 2232 2256666666655543 5577777776
No 52
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.80 E-value=5.3e-19 Score=176.66 Aligned_cols=202 Identities=13% Similarity=0.063 Sum_probs=144.6
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeC--ChHHHHHHHHhhhhc--C-C-CCccccC--CHHHHHhhcCCCcEEEE
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNR--TTSKVDETVERAKKE--G-D-LPLFGFR--DPESFVNSIQKPRVIIM 79 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr--~~~~~~~l~~~~~~~--~-~-~~~~~~~--s~~e~~~~l~~~dvIil 79 (474)
|||+|||+|.||..+|..|+++|++|++||| ++++.+.+.+.+... + . .++..++ +++++++. +|+||+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~D~vi~ 77 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN---AEVVLL 77 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT---CSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhc---CCEEEE
Confidence 5899999999999999999999999999999 999888877653200 0 0 0113444 66677766 999999
Q ss_pred ecCCChhHHHHHHHHHhcccCCCEEEecCCCC---c-hhHHHHHHHHHHc-CCeEEecCCCCCccccc---CCC--cccc
Q 011931 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW---Y-ENTERREKAMAEL-GLLYLGMGVSGGEEGAR---HGP--SLMP 149 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~---~-~~~~~~~~~l~~~-g~~~v~~pvsgg~~~a~---~G~--~i~~ 149 (474)
|||+. .+++++.++.+ +.++++||+++++. + ...+.+.+.+.+. |..+ ..++..+|..+. .|. .+++
T Consensus 78 ~v~~~-~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~-~~~~~~~p~~~~~~~~g~~~~~~~ 154 (335)
T 1txg_A 78 GVSTD-GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRE-RTVAITGPAIAREVAKRMPTTVVF 154 (335)
T ss_dssp CSCGG-GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGG-GEEEEESSCCHHHHHTTCCEEEEE
T ss_pred cCChH-HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCC-cEEEEECCCcHHHHHccCCcEEEE
Confidence 99986 88999999999 99999999998765 2 3444555555442 3211 112222222222 233 3444
Q ss_pred C-CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCch-----------------hHHHHHHH-----HHHHHHHHHHHHHH
Q 011931 150 G-GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGG-----------------SGNFVKMI-----HNGIEYGDMQLIAE 206 (474)
Q Consensus 150 g-g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g-----------------~g~~~K~v-----~N~~~~~~~~~i~E 206 (474)
+ .+++..+.++++|+..+.+ +.+.++.. ....+|+. +|.......++++|
T Consensus 155 ~~~~~~~~~~~~~ll~~~g~~-------~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E 227 (335)
T 1txg_A 155 SSPSESSANKMKEIFETEYFG-------VEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINE 227 (335)
T ss_dssp ECSCHHHHHHHHHHHCBTTEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHhCCCcEE-------EEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Confidence 4 4788899999999988765 35666643 33345777 88888888999999
Q ss_pred HHHHHHHhCCCCHHHHH
Q 011931 207 AYDVLKSVGKLTNEELQ 223 (474)
Q Consensus 207 a~~l~~~~G~l~~~~~~ 223 (474)
+..++++.| ++++++.
T Consensus 228 ~~~la~~~G-~~~~~~~ 243 (335)
T 1txg_A 228 MAELIEILG-GDRETAF 243 (335)
T ss_dssp HHHHHHHHT-SCGGGGG
T ss_pred HHHHHHHHC-CCcchhh
Confidence 999999999 9987654
No 53
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.79 E-value=6.4e-18 Score=161.90 Aligned_cols=195 Identities=14% Similarity=0.129 Sum_probs=134.8
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC----cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF----PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~----~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+|||+|||+|.||.+++.+|+++|+ +|++|||++++.+++.+.. ++..+.+++++++. +|+||+|||
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~------g~~~~~~~~e~~~~---aDvVilav~ 72 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY------GLTTTTDNNEVAKN---ADILILSIK 72 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH------CCEECSCHHHHHHH---CSEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh------CCEEeCChHHHHHh---CCEEEEEeC
Confidence 4789999999999999999999999 9999999999999887643 25677899999988 999999998
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec-CCCCCcccccCCC-cccc--CCCHHHHHH
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM-GVSGGEEGARHGP-SLMP--GGSFEAYKY 158 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~-pvsgg~~~a~~G~-~i~~--gg~~~~~~~ 158 (474)
+. .++++++++.+.++++++||+.+++... ..+.+.+. .+..++.. | ..|.....|. .+++ +++++.++.
T Consensus 73 ~~-~~~~v~~~l~~~l~~~~~vvs~~~gi~~--~~l~~~~~-~~~~~v~~~p--~~p~~~~~g~~~~~~~~~~~~~~~~~ 146 (247)
T 3gt0_A 73 PD-LYASIINEIKEIIKNDAIIVTIAAGKSI--ESTENAFN-KKVKVVRVMP--NTPALVGEGMSALCPNEMVTEKDLED 146 (247)
T ss_dssp TT-THHHHC---CCSSCTTCEEEECSCCSCH--HHHHHHHC-SCCEEEEEEC--CGGGGGTCEEEEEEECTTCCHHHHHH
T ss_pred HH-HHHHHHHHHHhhcCCCCEEEEecCCCCH--HHHHHHhC-CCCcEEEEeC--ChHHHHcCceEEEEeCCCCCHHHHHH
Confidence 64 8999999999999999999977666543 23444432 34445432 2 1122222344 3444 478999999
Q ss_pred HHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHHHH
Q 011931 159 IEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDV-LKSVGKLTNEELQNVFT 227 (474)
Q Consensus 159 v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l-~~~~G~l~~~~~~~~~~ 227 (474)
++++|+.+|.. +++++.-.-.++-+... .-+.+..+.|++.. +.+.| +++++..+++.
T Consensus 147 ~~~l~~~~G~~--------~~~~e~~~d~~~a~~g~--gpa~~~~~~eal~~a~~~~G-l~~~~a~~~~~ 205 (247)
T 3gt0_A 147 VLNIFNSFGQT--------EIVSEKLMDVVTSVSGS--SPAYVYMIIEAMADAAVLDG-MPRNQAYKFAA 205 (247)
T ss_dssp HHHHHGGGEEE--------EECCGGGHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH
T ss_pred HHHHHHhCCCE--------EEeCHHHccHHHHHhcc--HHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH
Confidence 99999999963 55543211111111111 11233444555544 77888 99999999873
No 54
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.79 E-value=4.7e-18 Score=168.49 Aligned_cols=172 Identities=16% Similarity=0.213 Sum_probs=136.4
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHH-HHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPES-FVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e-~~~~l~~~dvIil~vp 82 (474)
+++||||||+|.||.++|..|.++|+ +|++|||++++++.+.+.+.. ...++++++ +++. +|+||+|||
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~-----~~~~~~~~~~~~~~---aDvVilavp 103 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII-----DEGTTSIAKVEDFS---PDFVMLSSP 103 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC-----SEEESCTTGGGGGC---CSEEEECSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCc-----chhcCCHHHHhhcc---CCEEEEeCC
Confidence 34789999999999999999999999 999999999998887765421 134667888 7777 999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCC----ccccc----CCC-cccc---
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGG----EEGAR----HGP-SLMP--- 149 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~-~pvsgg----~~~a~----~G~-~i~~--- 149 (474)
+. .+.+++.++.+.++++.+|+|++++.......+.+.+.. +|++ .|+.|. +..+. .|. .+++
T Consensus 104 ~~-~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~---~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~ 179 (314)
T 3ggo_A 104 VR-TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTK 179 (314)
T ss_dssp GG-GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCT
T ss_pred HH-HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC---CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCC
Confidence 86 688899999999999999999999887666666665533 6887 588875 33333 465 4444
Q ss_pred CCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH
Q 011931 150 GGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI 196 (474)
Q Consensus 150 gg~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~ 196 (474)
+++++.++.++++|+.+|.+ ++++++......+.++...-
T Consensus 180 ~~~~~~~~~v~~l~~~~G~~-------v~~~~~~~hD~~~a~~s~lp 219 (314)
T 3ggo_A 180 KTDKKRLKLVKRVWEDVGGV-------VEYMSPELHDYVFGVVSHLP 219 (314)
T ss_dssp TSCHHHHHHHHHHHHHTTCE-------EEECCHHHHHHHHHHHTHHH
T ss_pred CCCHHHHHHHHHHHHHcCCE-------EEEcCHHHHHHHHHHHHHHH
Confidence 46899999999999999986 47888877777777765443
No 55
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.78 E-value=6.4e-19 Score=179.24 Aligned_cols=204 Identities=10% Similarity=0.083 Sum_probs=145.1
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCC-------CcEEEEeCChH-----HHHHHHHhhhhcC---C----CCccccCCHHH
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKG-------FPISVYNRTTS-----KVDETVERAKKEG---D----LPLFGFRDPES 66 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G-------~~V~v~dr~~~-----~~~~l~~~~~~~~---~----~~~~~~~s~~e 66 (474)
+||||+|||+|.||++||..|+++| ++|++|||+++ +.+.+.+.+.... + .++..++++++
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~e 99 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLAS 99 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHH
Confidence 3578999999999999999999999 99999999998 8887766431100 0 02456678888
Q ss_pred HHhhcCCCcEEEEecCCChhHHHHHHHHHh----cccCCCEEEecCCCCch---hHHHHHHHHHHc-CCeEEecCCCCCc
Q 011931 67 FVNSIQKPRVIIMLVKAGAPVDETIKTLSA----YMEKGDCIIDGGNEWYE---NTERREKAMAEL-GLLYLGMGVSGGE 138 (474)
Q Consensus 67 ~~~~l~~~dvIil~vp~~~~v~~vl~~l~~----~l~~g~iiId~st~~~~---~~~~~~~~l~~~-g~~~v~~pvsgg~ 138 (474)
+++. +|+||+|||+ ..+++++.++.+ .+.++++||+++++... ..+.+.+.+.+. + .+.++..+|
T Consensus 100 a~~~---aDvVilav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~---~~~~v~~gp 172 (375)
T 1yj8_A 100 VIND---ADLLIFIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN---IPCSALSGA 172 (375)
T ss_dssp HHTT---CSEEEECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSS---SCEEEEECS
T ss_pred HHcC---CCEEEEcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcC---CCEEEEeCC
Confidence 8877 9999999997 589999999998 89899999999976433 122333333321 2 122333333
Q ss_pred ccc---cCCC---ccccCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHH-----------------HHHHHHH
Q 011931 139 EGA---RHGP---SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNF-----------------VKMIHNG 195 (474)
Q Consensus 139 ~~a---~~G~---~i~~gg~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~-----------------~K~v~N~ 195 (474)
..+ ..|. .++.+++++..+.++++|+..+.+ +++.++.-...+ +|+.+|.
T Consensus 173 ~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~-------~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~ 245 (375)
T 1yj8_A 173 NIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFK-------INCVNETIEVEICGALKNIITLACGFCDGLNLPTNS 245 (375)
T ss_dssp CCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEE-------EEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred chHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeE-------EEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhH
Confidence 322 1333 344566888899999999988765 355555322222 3445788
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCCHHHHH
Q 011931 196 IEYGDMQLIAEAYDVLKSVG-KLTNEELQ 223 (474)
Q Consensus 196 ~~~~~~~~i~Ea~~l~~~~G-~l~~~~~~ 223 (474)
......++++|+..++++.| |++++++.
T Consensus 246 ~~a~~~~~~~E~~~la~a~G~G~~~~~~~ 274 (375)
T 1yj8_A 246 KSAIIRNGINEMILFGKVFFQKFNENILL 274 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcchhh
Confidence 88889999999999999994 49887664
No 56
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.77 E-value=1.7e-17 Score=161.79 Aligned_cols=178 Identities=16% Similarity=0.227 Sum_probs=138.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh-hcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN-SIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~-~l~~~dvIil~vp~ 83 (474)
|++|+|||+|.||..+|..|.++|+ +|++|||++++.+.+.+.+.. ...+++++++++ . +|+||+|||+
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~---aDvVilavp~ 72 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII-----DEGTTSIAKVEDFS---PDFVMLSSPV 72 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC-----SEEESCGGGGGGTC---CSEEEECSCH
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCc-----ccccCCHHHHhcCC---CCEEEEcCCH
Confidence 4689999999999999999999999 999999999988876654320 123567777776 6 9999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCC----ccccc----CCC-cccc---C
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGG----EEGAR----HGP-SLMP---G 150 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~-~pvsgg----~~~a~----~G~-~i~~---g 150 (474)
. .+.+++.++.+.++++.+|++++++.....+.+.+.+.. + +++ .|+.++ |..+. .|. +++. +
T Consensus 73 ~-~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~-~--~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~ 148 (281)
T 2g5c_A 73 R-TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK-R--FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKK 148 (281)
T ss_dssp H-HHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-G--EECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSS
T ss_pred H-HHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc-c--ceeeccccCCccCChhhhhhHHhCCCCEEEecCCC
Confidence 6 778889999888999999999999887666666666543 2 665 466653 33332 566 5555 6
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHH
Q 011931 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQL 203 (474)
Q Consensus 151 g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~ 203 (474)
++++.++.++++|+.+|.+ ++++++...+.++|++.|...+....+
T Consensus 149 ~~~~~~~~v~~l~~~~g~~-------~~~~~~~~~d~~~~~~~~~~~~~a~~~ 194 (281)
T 2g5c_A 149 TDKKRLKLVKRVWEDVGGV-------VEYMSPELHDYVFGVVSHLPHAVAFAL 194 (281)
T ss_dssp SCHHHHHHHHHHHHHTTCE-------EEECCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCE-------EEEcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999976 477887777889999988876544433
No 57
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.76 E-value=4.2e-18 Score=171.61 Aligned_cols=202 Identities=10% Similarity=0.060 Sum_probs=143.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC-------CcEEEEeCChH-----HHHHHHHhhhhc----C---CCCccccCCHHHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG-------FPISVYNRTTS-----KVDETVERAKKE----G---DLPLFGFRDPESF 67 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G-------~~V~v~dr~~~-----~~~~l~~~~~~~----~---~~~~~~~~s~~e~ 67 (474)
+|||+|||+|.||..+|..|+++| ++|++|||+++ +.+.+.+.+... + ..++..+++++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 468999999999999999999999 99999999988 787776532100 0 0024456788888
Q ss_pred HhhcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCc---hhHHHHHHHHHHc-CCeEEecCCCCCccccc-
Q 011931 68 VNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWY---ENTERREKAMAEL-GLLYLGMGVSGGEEGAR- 142 (474)
Q Consensus 68 ~~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~---~~~~~~~~~l~~~-g~~~v~~pvsgg~~~a~- 142 (474)
++. +|+||+|||+ ..++++++++.+.+.++++||+++++.. ...+.+.+.+.+. +. +.++..+|..+.
T Consensus 88 ~~~---aD~Vilav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~---~~~v~~gp~~a~~ 160 (354)
T 1x0v_A 88 AED---ADILIFVVPH-QFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGI---PMSVLMGANIASE 160 (354)
T ss_dssp HTT---CSEEEECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTC---CEEEEECSCCHHH
T ss_pred HcC---CCEEEEeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCC---CEEEEECCCcHHH
Confidence 777 9999999998 4899999999999999999999998653 2222232322221 31 223333333222
Q ss_pred --CCC---ccccCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHH-----------------HHHHHHHH
Q 011931 143 --HGP---SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMI-----------------HNGIEYGD 200 (474)
Q Consensus 143 --~G~---~i~~gg~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v-----------------~N~~~~~~ 200 (474)
.|. ..+.+++++..+.++++|+..+.+ +++.++.-...+.|.+ +|......
T Consensus 161 v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~-------~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~ 233 (354)
T 1x0v_A 161 VADEKFCETTIGCKDPAQGQLLKELMQTPNFR-------ITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVI 233 (354)
T ss_dssp HHTTCCEEEEEECSSHHHHHHHHHHHCBTTEE-------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHhcCCceEEEEECCHHHHHHHHHHhCCCCEE-------EEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHH
Confidence 343 234456788899999999988865 3555554333344433 77777888
Q ss_pred HHHHHHHHHHHHHhCCC---CHHHHH
Q 011931 201 MQLIAEAYDVLKSVGKL---TNEELQ 223 (474)
Q Consensus 201 ~~~i~Ea~~l~~~~G~l---~~~~~~ 223 (474)
..++.|+..++++.| + +++++.
T Consensus 234 ~~~~~E~~~la~a~G-~~~~~~~~~~ 258 (354)
T 1x0v_A 234 RLGLMEMIAFAKLFC-SGPVSSATFL 258 (354)
T ss_dssp HHHHHHHHHHHHHHS-SSCCCGGGGG
T ss_pred HHHHHHHHHHHHHhc-CCCCCccccc
Confidence 999999999999999 8 876653
No 58
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.76 E-value=2.9e-17 Score=160.59 Aligned_cols=197 Identities=15% Similarity=0.192 Sum_probs=140.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh-------cC-C----------CCccccCCHHHHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK-------EG-D----------LPLFGFRDPESFV 68 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~-------~~-~----------~~~~~~~s~~e~~ 68 (474)
++||+|||+|.||..+|..|+++|++|++||+++++++++.+.... .+ . .++..++++++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~ 83 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV 83 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence 5689999999999999999999999999999999988877654100 00 0 0245677888887
Q ss_pred hhcCCCcEEEEecCCChh-HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCC-c
Q 011931 69 NSIQKPRVIIMLVKAGAP-VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGP-S 146 (474)
Q Consensus 69 ~~l~~~dvIil~vp~~~~-v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~-~ 146 (474)
+. +|+||++||+..+ ...++.++.+.++++.++++.+++.+. .++++.+. ++.++++..... .+..++ .
T Consensus 84 ~~---aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~--~~la~~~~-~~~~~ig~h~~~---p~~~~~lv 154 (283)
T 4e12_A 84 KD---ADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLP--SDLVGYTG-RGDKFLALHFAN---HVWVNNTA 154 (283)
T ss_dssp TT---CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH--HHHHHHHS-CGGGEEEEEECS---STTTSCEE
T ss_pred cc---CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCH--HHHHhhcC-CCcceEEEccCC---CcccCceE
Confidence 77 9999999998743 456668888889999999987777643 34444442 222344332111 112344 3
Q ss_pred -cccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Q 011931 147 -LMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQ 223 (474)
Q Consensus 147 -i~~g--g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~ 223 (474)
++.+ .+++.++.++++++.+|.. +++++..+.|.. + |.+. ...++|++.++++.+ ++++++.
T Consensus 155 evv~~~~t~~~~~~~~~~l~~~~g~~-------~v~v~~~~~g~i---~-nr~~---~~~~~ea~~l~~~g~-~~~~~id 219 (283)
T 4e12_A 155 EVMGTTKTDPEVYQQVVEFASAIGMV-------PIELKKEKAGYV---L-NSLL---VPLLDAAAELLVDGI-ADPETID 219 (283)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHTTCE-------EEECSSCCTTTT---H-HHHH---HHHHHHHHHHHHTTS-CCHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCE-------EEEEecCCCCEE---e-hHHH---HHHHHHHHHHHHhCC-CCHHHHH
Confidence 3333 3789999999999999976 477766666653 3 4433 346799999999988 9999999
Q ss_pred HHHH
Q 011931 224 NVFT 227 (474)
Q Consensus 224 ~~~~ 227 (474)
+++.
T Consensus 220 ~~~~ 223 (283)
T 4e12_A 220 KTWR 223 (283)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 59
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.75 E-value=6.8e-17 Score=157.68 Aligned_cols=194 Identities=19% Similarity=0.180 Sum_probs=142.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC---cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF---PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
+|||||||+|.||.+|+..|+++|+ +|++|||++++.+++.+.. ++..+.+..++++. +|+||+|||+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~------gi~~~~~~~~~~~~---aDvVilav~p 73 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC------GVHTTQDNRQGALN---ADVVVLAVKP 73 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT------CCEEESCHHHHHSS---CSEEEECSCG
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc------CCEEeCChHHHHhc---CCeEEEEeCH
Confidence 5789999999999999999999999 9999999999999887752 25677888888887 9999999987
Q ss_pred ChhHHHHHHHHHhc-ccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCCcccccCCCc-cccC--CCHHHHHH
Q 011931 84 GAPVDETIKTLSAY-MEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGGEEGARHGPS-LMPG--GSFEAYKY 158 (474)
Q Consensus 84 ~~~v~~vl~~l~~~-l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~-~pvsgg~~~a~~G~~-i~~g--g~~~~~~~ 158 (474)
+.++++++++.+. ++++++||+.+++.+. ..+.+.+. .+..++. +|. .|.....|.+ ++++ .+++.++.
T Consensus 74 -~~~~~vl~~l~~~~l~~~~iiiS~~agi~~--~~l~~~l~-~~~~vvr~mPn--~p~~v~~g~~~l~~~~~~~~~~~~~ 147 (280)
T 3tri_A 74 -HQIKMVCEELKDILSETKILVISLAVGVTT--PLIEKWLG-KASRIVRAMPN--TPSSVRAGATGLFANETVDKDQKNL 147 (280)
T ss_dssp -GGHHHHHHHHHHHHHTTTCEEEECCTTCCH--HHHHHHHT-CCSSEEEEECC--GGGGGTCEEEEEECCTTSCHHHHHH
T ss_pred -HHHHHHHHHHHhhccCCCeEEEEecCCCCH--HHHHHHcC-CCCeEEEEecC--ChHHhcCccEEEEeCCCCCHHHHHH
Confidence 5899999999998 8888899988877653 34555443 3345554 342 2222333443 3444 36899999
Q ss_pred HHHHHHHHhccCCCCCCceEEeCCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011931 159 IEDILLKVAAQVPDSGPCVTYVSKGG---SGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFT 227 (474)
Q Consensus 159 v~~ll~~lg~~~~~~~~~~~~~g~~g---~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~ 227 (474)
++++|+.+|.. .++.+.. ....+.-..+++.+.++..+.|+ +.+.| +++++..+++.
T Consensus 148 v~~l~~~iG~~--------~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a---~v~~G-l~~~~a~~l~~ 207 (280)
T 3tri_A 148 AESIMRAVGLV--------IWVSSEDQIEKIAALSGSGPAYIFLIMEALQEA---AEQLG-LTKETAELLTE 207 (280)
T ss_dssp HHHHHGGGEEE--------EECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHCCCe--------EEECCHHHhhHHHHHhccHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH
Confidence 99999999963 4554311 11111111245677778888887 56888 99999998874
No 60
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=1.5e-17 Score=166.23 Aligned_cols=177 Identities=15% Similarity=0.164 Sum_probs=131.8
Q ss_pred CCCCCCcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhh-cCCCcEEEE
Q 011931 1 MVEGKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNS-IQKPRVIIM 79 (474)
Q Consensus 1 m~~~~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~-l~~~dvIil 79 (474)
|..+..+++|+|||+|.||.+||+.|.++|++|++|||++++.+.+.+.+ +..+.+++++++. ...+|+||+
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G-------~~~~~~~~e~~~~a~~~aDlVil 74 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEG-------FDVSADLEATLQRAAAEDALIVL 74 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTT-------CCEESCHHHHHHHHHHTTCEEEE
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------CeeeCCHHHHHHhcccCCCEEEE
Confidence 44455678999999999999999999999999999999999888776543 4456788877653 122699999
Q ss_pred ecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCCc-cccc-------CCC-cccc
Q 011931 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGGE-EGAR-------HGP-SLMP 149 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~-~pvsgg~-~~a~-------~G~-~i~~ 149 (474)
|||.. .+..++.++.+. .++.+|+|++++.....+.+.+.+ .+.+|++ .|++|++ .+.. .|. .+++
T Consensus 75 avP~~-~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~--~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~ilt 150 (341)
T 3ktd_A 75 AVPMT-AIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARN--MQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVT 150 (341)
T ss_dssp CSCHH-HHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTT--CGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEEC
T ss_pred eCCHH-HHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhC--CCCcEecCCccccccccchhhhhhHHhcCCeEEEE
Confidence 99974 788999998885 789999999998865555554433 2468998 6999875 3332 343 4454
Q ss_pred CC---CHH--------HHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHH
Q 011931 150 GG---SFE--------AYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNG 195 (474)
Q Consensus 150 gg---~~~--------~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~ 195 (474)
.+ +++ .++.++++|+.+|++ ++++++...-..+.++...
T Consensus 151 p~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~-------v~~~~~~~HD~~~A~vshl 200 (341)
T 3ktd_A 151 FDQLFDGTDINSTWISIWKDVVQMALAVGAE-------VVPSRVGPHDAAAARVSHL 200 (341)
T ss_dssp CGGGTSSCCCCHHHHHHHHHHHHHHHHTTCE-------EEECCHHHHHHHHHHHTHH
T ss_pred eCCCCChhhhccchHHHHHHHHHHHHHcCCE-------EEEeCHHHHHHHHHHHhHH
Confidence 43 566 899999999999987 4788776666666555443
No 61
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.73 E-value=6.5e-17 Score=166.86 Aligned_cols=193 Identities=11% Similarity=0.116 Sum_probs=137.1
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHH--------HHHHhhhhcC------CCCccccCCHHHHHhhc
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVD--------ETVERAKKEG------DLPLFGFRDPESFVNSI 71 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~--------~l~~~~~~~~------~~~~~~~~s~~e~~~~l 71 (474)
.++||+|||+|.||.+||..|+++|++|++||+++++.. ++.+.+.... ..+++.+++++ .++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~- 130 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSN- 130 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTT-
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHcc-
Confidence 457899999999999999999999999999999998432 2222221000 00345667775 3444
Q ss_pred CCCcEEEEecCCChhHH-HHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCCcccccCCC-
Q 011931 72 QKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEGARHGP- 145 (474)
Q Consensus 72 ~~~dvIil~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~v~~pvsgg~~~a~~G~- 145 (474)
||+||+|||....++ .++.++.+.+++++||++.+++.+.+ ++++.+.. .|.||++ |+. ..+
T Consensus 131 --aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~--~ia~~~~~p~r~iG~Hffn-Pv~-------~m~L 198 (460)
T 3k6j_A 131 --CDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN--EISSVLRDPSNLVGIHFFN-PAN-------VIRL 198 (460)
T ss_dssp --CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH--HHHTTSSSGGGEEEEECCS-STT-------TCCE
T ss_pred --CCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH--HHHHhccCCcceEEEEecc-hhh-------hCCE
Confidence 999999999876665 56688999999999998776665432 34433321 1455555 332 223
Q ss_pred -ccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Q 011931 146 -SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEEL 222 (474)
Q Consensus 146 -~i~~g--g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~ 222 (474)
.++.| +++++++.+.++++.+|+. ++++++ +.|. +.|.+.. ..++|++.++++.| ++++++
T Consensus 199 vEIv~g~~Ts~e~~~~~~~l~~~lGk~-------~v~v~d-~pGf----i~Nril~---~~~~EA~~l~~~~G-a~~e~I 262 (460)
T 3k6j_A 199 VEIIYGSHTSSQAIATAFQACESIKKL-------PVLVGN-CKSF----VFNRLLH---VYFDQSQKLMYEYG-YLPHQI 262 (460)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHTTCE-------EEEESS-CCHH----HHHHHHH---HHHHHHHHHHHTSC-CCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCE-------EEEEec-ccHH----HHHHHHH---HHHHHHHHHHHHcC-CCHHHH
Confidence 35666 3899999999999999976 477876 5564 3455543 45799999998889 999999
Q ss_pred HHHHHh
Q 011931 223 QNVFTE 228 (474)
Q Consensus 223 ~~~~~~ 228 (474)
.+++..
T Consensus 263 D~a~~~ 268 (460)
T 3k6j_A 263 DKIITN 268 (460)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999853
No 62
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.73 E-value=6.4e-17 Score=155.99 Aligned_cols=186 Identities=16% Similarity=0.180 Sum_probs=133.5
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCC----CcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKG----FPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G----~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
+++|||+|||+|.||+.|+.+|+++| ++|++|||++++ . ++..+.+++++++. +|+||+|
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~-------g~~~~~~~~~~~~~---~D~vi~~ 65 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------T-------TLNYMSSNEELARH---CDIIVCA 65 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------S-------SSEECSCHHHHHHH---CSEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------C-------ceEEeCCHHHHHhc---CCEEEEE
Confidence 44679999999999999999999999 799999999876 1 25567788888888 9999999
Q ss_pred cCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHc--CCeEEe-cCCCCCcccccCCCccccCC---CHH
Q 011931 81 VKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL--GLLYLG-MGVSGGEEGARHGPSLMPGG---SFE 154 (474)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~--g~~~v~-~pvsgg~~~a~~G~~i~~gg---~~~ 154 (474)
||+. .+++++.++.+.+ ++++||..+++.... .+.+.+... .++++. .|+.+ ..|.+++.++ +++
T Consensus 66 v~~~-~~~~v~~~l~~~l-~~~~vv~~~~gi~~~--~l~~~~~~~~~~v~~~p~~p~~~-----~~g~~~~~~~~~~~~~ 136 (262)
T 2rcy_A 66 VKPD-IAGSVLNNIKPYL-SSKLLISICGGLNIG--KLEEMVGSENKIVWVMPNTPCLV-----GEGSFIYCSNKNVNST 136 (262)
T ss_dssp SCTT-THHHHHHHSGGGC-TTCEEEECCSSCCHH--HHHHHHCTTSEEEEEECCGGGGG-----TCEEEEEEECTTCCHH
T ss_pred eCHH-HHHHHHHHHHHhc-CCCEEEEECCCCCHH--HHHHHhCCCCcEEEECCChHHHH-----cCCeEEEEeCCCCCHH
Confidence 9964 8999999998888 556555554444332 333434321 133332 23332 2455444433 788
Q ss_pred HHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011931 155 AYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKM--IHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNVFT 227 (474)
Q Consensus 155 ~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~--v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~~~ 227 (474)
.++.++++|+.+|. ++++++......+++ +.|.+.+..+..+.|+ +.+.| ++++++.+++.
T Consensus 137 ~~~~~~~ll~~~G~--------~~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~~~G-l~~~~~~~~~~ 199 (262)
T 2rcy_A 137 DKKYVNDIFNSCGI--------IHEIKEKDMDIATAISGCGPAYVYLFIESLIDA---GVKNG-LSRELSKNLVL 199 (262)
T ss_dssp HHHHHHHHHHTSEE--------EEECCGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--------EEEeCHHHccHHHHHHccHHHHHHHHHHHHHHH---HHHcC-CCHHHHHHHHH
Confidence 99999999999985 377877555555555 3466777777777776 67888 99988888764
No 63
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.73 E-value=5.6e-17 Score=151.32 Aligned_cols=179 Identities=13% Similarity=0.124 Sum_probs=136.1
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc-CCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE-GDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~-~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
|||+||| +|.||+.++..|+++|++|+++||++++.+++.+..... ...++. ..+++++++. +|+||+++|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~D~Vi~~~~~~- 75 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEA---CDIAVLTIPWE- 75 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHH---CSEEEECSCHH-
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhc---CCEEEEeCChh-
Confidence 5899999 999999999999999999999999999888776542100 000133 3577787777 99999999975
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCch------------hHHHHHHHHHHcCCeEEec--CCCCCcccc--cCCC-ccc
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYE------------NTERREKAMAELGLLYLGM--GVSGGEEGA--RHGP-SLM 148 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~------------~~~~~~~~l~~~g~~~v~~--pvsgg~~~a--~~G~-~i~ 148 (474)
.+++++.++.+.+ ++++|+|++++... ..+++.+.+. +.+++++ |+.+..... ..|. .++
T Consensus 76 ~~~~~~~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 152 (212)
T 1jay_A 76 HAIDTARDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE--SEKVVSALHTIPAARFANLDEKFDWDVP 152 (212)
T ss_dssp HHHHHHHHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT--CSCEEECCTTCCHHHHHCTTCCCCEEEE
T ss_pred hHHHHHHHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC--CCeEEEEccchHHHHhhCcCCCCCccEE
Confidence 6788888887777 58999999995541 2456666553 4678876 655544333 4455 666
Q ss_pred cCCC-HHHHHHHHHHHHHH-hccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHH
Q 011931 149 PGGS-FEAYKYIEDILLKV-AAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDM 201 (474)
Q Consensus 149 ~gg~-~~~~~~v~~ll~~l-g~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~ 201 (474)
++|+ ++.++.++++|+.+ |.+ ++++++.+.+.++|++.|.+.+...
T Consensus 153 ~~g~~~~~~~~v~~l~~~~~G~~-------~~~~~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 153 VCGDDDESKKVVMSLISEIDGLR-------PLDAGPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp EEESCHHHHHHHHHHHHHSTTEE-------EEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred EECCcHHHHHHHHHHHHHcCCCC-------ceeccchhHHHHhcchHHHHHHHHH
Confidence 6675 89999999999999 875 4788999999999999998766543
No 64
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.73 E-value=6.1e-17 Score=169.13 Aligned_cols=189 Identities=14% Similarity=0.204 Sum_probs=137.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-------hcCCC----------CccccCCHHHHHh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------KEGDL----------PLFGFRDPESFVN 69 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------~~~~~----------~~~~~~s~~e~~~ 69 (474)
++||||||+|.||.+||.+|+++|++|++||+++++++++.+... ..+.. +++.++++++ ++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHA-LA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGG-GG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHH-hc
Confidence 568999999999999999999999999999999999887764210 00000 2345667653 55
Q ss_pred hcCCCcEEEEecCCChhHH-HHHHHHHhcccCCCEEEe-cCCCCchhHHHHHHHHHH----cCCeEEe-cCCCCCccccc
Q 011931 70 SIQKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIID-GGNEWYENTERREKAMAE----LGLLYLG-MGVSGGEEGAR 142 (474)
Q Consensus 70 ~l~~~dvIil~vp~~~~v~-~vl~~l~~~l~~g~iiId-~st~~~~~~~~~~~~l~~----~g~~~v~-~pvsgg~~~a~ 142 (474)
. ||+||+|||+..+++ .++.++.+.++++++|++ +|+.++ + .+++.+.. .|.||++ +|++
T Consensus 84 ~---aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i-~--~ia~~~~~p~~~ig~hf~~Pa~v~------- 150 (483)
T 3mog_A 84 A---ADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI-T--AIAAEIKNPERVAGLHFFNPAPVM------- 150 (483)
T ss_dssp G---CSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH-H--HHTTTSSSGGGEEEEEECSSTTTC-------
T ss_pred C---CCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH-H--HHHHHccCccceEEeeecChhhhC-------
Confidence 5 999999999986664 677889899999999965 555443 2 33332211 2556665 3433
Q ss_pred CCC-ccccCC---CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 011931 143 HGP-SLMPGG---SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLT 218 (474)
Q Consensus 143 ~G~-~i~~gg---~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~ 218 (474)
+ ..+++| +++.++.+.++++.+|.. ++++++. .| ++++|.+.. .++|++.++++.+ ++
T Consensus 151 --~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~-------~v~v~d~-~G---fi~Nr~l~~----~~~Ea~~l~~~g~-~~ 212 (483)
T 3mog_A 151 --KLVEVVSGLATAAEVVEQLCELTLSWGKQ-------PVRCHST-PG---FIVNRVARP----YYSEAWRALEEQV-AA 212 (483)
T ss_dssp --CEEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEEESC-TT---TTHHHHTHH----HHHHHHHHHHTTC-SC
T ss_pred --CeEEEecCCCCCHHHHHHHHHHHHHhCCE-------EEEEecc-Cc---chHHHHHHH----HHHHHHHHHHhCC-CC
Confidence 3 344554 899999999999999976 4777763 24 556555433 6899999999988 99
Q ss_pred HHHHHHHHH
Q 011931 219 NEELQNVFT 227 (474)
Q Consensus 219 ~~~~~~~~~ 227 (474)
++++.+++.
T Consensus 213 ~~~id~a~~ 221 (483)
T 3mog_A 213 PEVIDAALR 221 (483)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999985
No 65
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.72 E-value=2.3e-16 Score=155.60 Aligned_cols=193 Identities=13% Similarity=0.206 Sum_probs=135.5
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-------hcCC---------------CCccccCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------KEGD---------------LPLFGFRD 63 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------~~~~---------------~~~~~~~s 63 (474)
.|++|+|||+|.||.+||..|+++|++|++||++++++++..+... ..+. .+++.+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 93 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTD 93 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecC
Confidence 3568999999999999999999999999999999998776432110 0000 02445678
Q ss_pred HHHHHhhcCCCcEEEEecCCChhH-HHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCCc
Q 011931 64 PESFVNSIQKPRVIIMLVKAGAPV-DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGE 138 (474)
Q Consensus 64 ~~e~~~~l~~~dvIil~vp~~~~v-~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~v~~pvsgg~ 138 (474)
+++.++. +|+||+|||+..++ +.++.++.+.+.++.+|++.+++.+.. ++.+.+.. .+.||++ |+.
T Consensus 94 ~~~~~~~---aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~--~l~~~~~~~~~~~g~h~~~-P~~--- 164 (302)
T 1f0y_A 94 AASVVHS---TDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT--SIANATTRQDRFAGLHFFN-PVP--- 164 (302)
T ss_dssp HHHHTTS---CSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH--HHHTTSSCGGGEEEEEECS-STT---
T ss_pred HHHhhcC---CCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH--HHHHhcCCcccEEEEecCC-Ccc---
Confidence 8777776 99999999987554 466788888888899998776665433 33332211 1334443 221
Q ss_pred ccccCCC--ccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011931 139 EGARHGP--SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV 214 (474)
Q Consensus 139 ~~a~~G~--~i~~g--g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~ 214 (474)
.++ .++.| ++++.++.+.++++.+|.. ++++++. .| ++++|.+ ..+++|++.++++.
T Consensus 165 ----~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~-------~v~~~~~-~g---~i~nr~l----~~~~~Ea~~l~~~g 225 (302)
T 1f0y_A 165 ----VMKLVEVIKTPMTSQKTFESLVDFSKALGKH-------PVSCKDT-PG---FIVNRLL----VPYLMEAIRLYERG 225 (302)
T ss_dssp ----TCCEEEEECCTTCCHHHHHHHHHHHHHTTCE-------EEEECSC-TT---TTHHHHH----HHHHHHHHHHHHTT
T ss_pred ----cCceEEEeCCCCCCHHHHHHHHHHHHHcCCc-------eEEecCc-cc---ccHHHHH----HHHHHHHHHHHHcC
Confidence 233 34544 3899999999999999965 4677652 33 3444443 35689999999998
Q ss_pred CCCCHHHHHHHHH
Q 011931 215 GKLTNEELQNVFT 227 (474)
Q Consensus 215 G~l~~~~~~~~~~ 227 (474)
| ++++++..++.
T Consensus 226 ~-~~~~~id~~~~ 237 (302)
T 1f0y_A 226 D-ASKEDIDTAMK 237 (302)
T ss_dssp S-SCHHHHHHHHH
T ss_pred C-CCHHHHHHHHH
Confidence 8 99999988873
No 66
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.71 E-value=2.3e-16 Score=153.53 Aligned_cols=192 Identities=16% Similarity=0.166 Sum_probs=139.2
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
|+|+|||+|.||..++..|.+.|++|++|||++++.+.+.+.+. ....+.+++++ .. +|+||+|+|+. .+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~-~~---~D~vi~av~~~-~~ 70 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL-----VDEAGQDLSLL-QT---AKIIFLCTPIQ-LI 70 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS-----CSEEESCGGGG-TT---CSEEEECSCHH-HH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCC-----CccccCCHHHh-CC---CCEEEEECCHH-HH
Confidence 58999999999999999999999999999999999888765431 11245677777 66 99999999975 78
Q ss_pred HHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec-CCCCCc----cccc----CCC-cccc---CCCHH
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM-GVSGGE----EGAR----HGP-SLMP---GGSFE 154 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~-pvsgg~----~~a~----~G~-~i~~---gg~~~ 154 (474)
.+++.++.+.++++.+|+++++..+...+.+.+.+ .++++. |+.|++ ..+. .|. +++. +++++
T Consensus 71 ~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~----~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~ 146 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLW----SGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPE 146 (279)
T ss_dssp HHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHS----TTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHH
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHh----CCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHH
Confidence 89999999999999999999887765544433322 256665 776543 2222 344 3332 35889
Q ss_pred HHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--HHHHHHH
Q 011931 155 AYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLT--NEELQNV 225 (474)
Q Consensus 155 ~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~--~~~~~~~ 225 (474)
..+.++++|+.+|.+ ++++++.....++|++.|.-.+... .+.++ +...| ++ .+....+
T Consensus 147 ~~~~v~~l~~~~g~~-------~~~~~~~~~~~~~~~~~~~p~~i~~-al~~~---~~~~~-~~~~~~~~~~l 207 (279)
T 2f1k_A 147 QLACLRSVLEPLGVK-------IYLCTPADHDQAVAWISHLPVMVSA-ALIQA---CAGEK-DGDILKLAQNL 207 (279)
T ss_dssp HHHHHHHHHGGGTCE-------EEECCHHHHHHHHHHHTHHHHHHHH-HHHHH---HHTCS-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCE-------EEEcCHHHHHHHHHHHhhHHHHHHH-HHHHH---HHhcc-cccchhHHHhh
Confidence 999999999999976 4778888888899999987554444 33443 23344 54 3444443
No 67
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.71 E-value=4.7e-17 Score=163.92 Aligned_cols=268 Identities=16% Similarity=0.128 Sum_probs=158.8
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc--C-CC----Cc-cccCCHHHHHhhcCCCcEEE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE--G-DL----PL-FGFRDPESFVNSIQKPRVII 78 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~--~-~~----~~-~~~~s~~e~~~~l~~~dvIi 78 (474)
+|||+|||+|.||..+|..|+++|++|++|||++++.+.+.+.+... + .. ++ ..++++++++.. +|+||
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~D~vi 80 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD---ADVIL 80 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT---CSEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhc---CCEEE
Confidence 47999999999999999999999999999999999998887653100 0 00 11 245678887776 99999
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcC---CeEEe---cCCCCCccc---cc----CCC
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELG---LLYLG---MGVSGGEEG---AR----HGP 145 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g---~~~v~---~pvsgg~~~---a~----~G~ 145 (474)
+|+|+. ..++++.++.+.+.++++||+..+..+. +.++.+.+.+.+ +.|++ .|+.+...+ +. .+.
T Consensus 81 ~~v~~~-~~~~~~~~l~~~l~~~~~vv~~~~~~~~-~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~gpg~v~~~~~~~~ 158 (359)
T 1bg6_A 81 IVVPAI-HHASIAANIASYISEGQLIILNPGATGG-ALEFRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIKGA 158 (359)
T ss_dssp ECSCGG-GHHHHHHHHGGGCCTTCEEEESSCCSSH-HHHHHHHHHHTTCCCCEEEEESSCSEEEECSSTTEEEEEEECSC
T ss_pred EeCCch-HHHHHHHHHHHhCCCCCEEEEcCCCchH-HHHHHHHHHhcCCCCeEEEEecCCcEEEEeCCCCEEEEEEeecc
Confidence 999986 6788999999999999999998553333 344555566554 45655 454432111 10 011
Q ss_pred c-cc--c-CCCHHHHHHHHHHHHHHhccCCCCC-----C---ceEEeCCc--hhHHHHH---HH------HHHHHHHHHH
Q 011931 146 S-LM--P-GGSFEAYKYIEDILLKVAAQVPDSG-----P---CVTYVSKG--GSGNFVK---MI------HNGIEYGDMQ 202 (474)
Q Consensus 146 ~-i~--~-gg~~~~~~~v~~ll~~lg~~~~~~~-----~---~~~~~g~~--g~g~~~K---~v------~N~~~~~~~~ 202 (474)
. +- . +++++.++.++++|..+... .+- . ++++.+.. +.+...| +. .+.......+
T Consensus 159 ~~~g~~~~~~~~~~~~~l~~~~~~~~~~--~di~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (359)
T 1bg6_A 159 MDFACLPAAKAGWALEQIGSVLPQYVAV--ENVLHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEGITPSVGSLAEK 236 (359)
T ss_dssp EEEEEESGGGHHHHHHHHTTTCTTEEEC--SCHHHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHHHCCHHHHHHHHH
T ss_pred eEEEeccccccHHHHHHHHHHhhhcEEc--CChHhhhccCCCccccHHHHHhhhchhhcCCccchhhcCCCHHHHHHHHH
Confidence 1 10 1 24555677777777543210 000 0 01110110 2222222 11 2334566788
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHhhccCcchh---h--hHhhhcccccccccCCCcchHH--HHhhhcCCCccHHHHH
Q 011931 203 LIAEAYDVLKSVGKLTNEELQNVFTEWNKGELLS---F--LIEITADIFGIKDDKGDGYLVD--KVLDKTGMKGTGKWTV 275 (474)
Q Consensus 203 ~i~Ea~~l~~~~G~l~~~~~~~~~~~~~~~~~~s---~--~~~~~~~~l~~~~~~~~~~~~~--~i~~~~~~k~tg~~~~ 275 (474)
++.|+..++++.| ++++.+.+.+.........+ + ..++..++. .+ ..++ .+.+|+. -+.| ..+
T Consensus 237 ~~~E~~~va~a~G-~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~------~~-~e~~~~~~~~D~~-~~~g-~~~ 306 (359)
T 1bg6_A 237 VDAERIAIAKAFD-LNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIA------GP-INLNTRYFFEDVS-TGLV-PLS 306 (359)
T ss_dssp HHHHHHHHHHTTT-CCCCCHHHHC-------CCSHHHHHHTCGGGTTCB------CC-SSSCCHHHHHHHH-TTHH-HHH
T ss_pred HHHHHHHHHHHhC-CCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCC------CC-CCCCccceecCcC-ccHH-HHH
Confidence 9999999999999 99876666653211111110 0 111222221 11 1233 4555541 1123 688
Q ss_pred HHHHHcCCCcccHHHH
Q 011931 276 QQAADLSVAAPTIEER 291 (474)
Q Consensus 276 ~~a~~~gv~~p~~~~r 291 (474)
+.|+++|+|+|+.+.-
T Consensus 307 ~~a~~~gv~~P~~~~l 322 (359)
T 1bg6_A 307 ELGRAVNVPTPLIDAV 322 (359)
T ss_dssp HHHHHTTCCCHHHHHH
T ss_pred HHHHHcCCCchHHHHH
Confidence 9999999999999443
No 68
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.70 E-value=1.3e-16 Score=156.23 Aligned_cols=155 Identities=25% Similarity=0.311 Sum_probs=120.2
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++|+|+|||+|.||.++|..|+++ |++|++|||++++.+.+.+.+. ....+.+++++++. +|+||+|||+
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~---aDvVilavp~ 76 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI-----VDEATADFKVFAAL---ADVIILAVPI 76 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS-----CSEEESCTTTTGGG---CSEEEECSCH
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC-----cccccCCHHHhhcC---CCEEEEcCCH
Confidence 357999999999999999999988 6899999999999888765431 01345677777777 9999999998
Q ss_pred ChhHHHHHHHHHhc-ccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCC----Cccccc----CCC-ccc---c
Q 011931 84 GAPVDETIKTLSAY-MEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSG----GEEGAR----HGP-SLM---P 149 (474)
Q Consensus 84 ~~~v~~vl~~l~~~-l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~-~pvsg----g~~~a~----~G~-~i~---~ 149 (474)
. .+++++.++.+. ++++.+|+|++++.+..++.+.+.+..++++|++ .|++| ++..+. .|. .++ .
T Consensus 77 ~-~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~ 155 (290)
T 3b1f_A 77 K-KTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSC 155 (290)
T ss_dssp H-HHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECT
T ss_pred H-HHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCC
Confidence 6 678899999998 8999999999998776666666655444788887 57766 443333 555 322 3
Q ss_pred CCCHHHHHHHHHHHHHHhcc
Q 011931 150 GGSFEAYKYIEDILLKVAAQ 169 (474)
Q Consensus 150 gg~~~~~~~v~~ll~~lg~~ 169 (474)
+++++.++.++++|+.+|.+
T Consensus 156 ~~~~~~~~~v~~l~~~~G~~ 175 (290)
T 3b1f_A 156 LTKPNTIPALQDLLSGLHAR 175 (290)
T ss_dssp TCCTTHHHHHHHHTGGGCCE
T ss_pred CCCHHHHHHHHHHHHHcCCE
Confidence 57889999999999999975
No 69
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.68 E-value=1.2e-15 Score=151.53 Aligned_cols=247 Identities=13% Similarity=0.141 Sum_probs=161.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcC--C----CCccccCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEG--D----LPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~--~----~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
+|||+|||+|.||+.+|..|+++|++|++| +++++++.+.+.+.... + .++..++++++ +.. +|+||+|
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~---~D~vila 93 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQG---ADLVLFC 93 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTT---CSEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCC---CCEEEEE
Confidence 579999999999999999999999999999 99999988877542100 0 01233455554 344 9999999
Q ss_pred cCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe------cCCCCCcccccC-CC-ccccCCC
Q 011931 81 VKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG------MGVSGGEEGARH-GP-SLMPGGS 152 (474)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~------~pvsgg~~~a~~-G~-~i~~gg~ 152 (474)
||+. +++++++++.+.+.++++||.++++.... +.+.+.+. -..+. +-.+| |..+.+ +. .+.+|.
T Consensus 94 vk~~-~~~~~l~~l~~~l~~~~~iv~~~nGi~~~-~~l~~~~~---~~vl~g~~~~~a~~~g-P~~~~~~~~g~~~ig~- 166 (318)
T 3hwr_A 94 VKST-DTQSAALAMKPALAKSALVLSLQNGVENA-DTLRSLLE---QEVAAAVVYVATEMAG-PGHVRHHGRGELVIEP- 166 (318)
T ss_dssp CCGG-GHHHHHHHHTTTSCTTCEEEEECSSSSHH-HHHHHHCC---SEEEEEEEEEEEEEEE-TTEEEEEEEEEEEECC-
T ss_pred cccc-cHHHHHHHHHHhcCCCCEEEEeCCCCCcH-HHHHHHcC---CcEEEEEEEEeEEEcC-CeEEEEcCCceEEEcC-
Confidence 9996 89999999999999999999999987432 33444332 12222 11111 111111 12 233444
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH---------------------HHHHHHHHHHHHHHH
Q 011931 153 FEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI---------------------EYGDMQLIAEAYDVL 211 (474)
Q Consensus 153 ~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~---------------------~~~~~~~i~Ea~~l~ 211 (474)
.+..+.+.++|...+.+ ++...+.-...+.|++.|.. ...+..++.|+..++
T Consensus 167 ~~~~~~l~~~l~~~~~~-------~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va 239 (318)
T 3hwr_A 167 TSHGANLAAIFAAAGVP-------VETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVA 239 (318)
T ss_dssp CTTTHHHHHHHHHTTCC-------EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCC-------cEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHH
Confidence 34557788899887765 35555677778889887742 234567889999999
Q ss_pred HHhCCCCH--HHHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHH
Q 011931 212 KSVGKLTN--EELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIE 289 (474)
Q Consensus 212 ~~~G~l~~--~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~ 289 (474)
++.| ++. +....++....... ....++.+++.+.+. ..+|.+.. +.++.|+++|+|+|..+
T Consensus 240 ~a~G-~~l~~~~~~~~~~~~~~~~--~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~tP~~~ 302 (318)
T 3hwr_A 240 RAEG-VKLPDDVALAIRRIAETMP--RQSSSTAQDLARGKR-----SEIDHLNG---------LIVRRGDALGIPVPANR 302 (318)
T ss_dssp HHTT-CCCCTTHHHHHHHHHHHST--TCCCHHHHHHHTTCC-----CSGGGTHH---------HHHHHHHHTTCCCHHHH
T ss_pred HHcC-CCCChHHHHHHHHHHHhcC--CCCcHHHHHHHcCCh-----hHHHHHHH---------HHHHHHHHhCCCCcHHH
Confidence 9998 763 22222222111111 223345556554432 35666654 57899999999999873
No 70
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.68 E-value=2.7e-16 Score=157.36 Aligned_cols=253 Identities=18% Similarity=0.205 Sum_probs=158.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc---C---CCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE---G---DLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~---~---~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
+|||+|||+|.||..+|..|+++|++|++|+|+ ++.+.+.+.+... + ..++..+++++++ .. +|+||+|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~---~D~Vila 77 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAAL-GE---QDVVIVA 77 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHH-CC---CSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-CC---CCEEEEe
Confidence 579999999999999999999999999999996 6677766543210 0 0012234566663 44 9999999
Q ss_pred cCCChhHHHHHHHHHhcccCCCEEEecCCCCc------------------hhHHHHHHHHHHcCCeEEec------CCCC
Q 011931 81 VKAGAPVDETIKTLSAYMEKGDCIIDGGNEWY------------------ENTERREKAMAELGLLYLGM------GVSG 136 (474)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~------------------~~~~~~~~~l~~~g~~~v~~------pvsg 136 (474)
||+. +++++++.+.+.+.++++||.+.|+.+ ...+.+.+.+... +++.+ ...+
T Consensus 78 vk~~-~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~--~v~~gv~~~~a~~~~ 154 (335)
T 3ghy_A 78 VKAP-ALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTR--HVLGCVVHLTCATVS 154 (335)
T ss_dssp CCHH-HHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGG--GEEEEEECCCEEESS
T ss_pred CCch-hHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcc--cEEEEEEEEEEEEcC
Confidence 9984 899999999999999999999999852 1122333433221 22221 1111
Q ss_pred CcccccCCC-ccccC----CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHH-----------------
Q 011931 137 GEEGARHGP-SLMPG----GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHN----------------- 194 (474)
Q Consensus 137 g~~~a~~G~-~i~~g----g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N----------------- 194 (474)
.......+. .+.+| .+.+..+.+..+|+..+.+ +....+.-...+.|++.|
T Consensus 155 pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~-------~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~ 227 (335)
T 3ghy_A 155 PGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQ-------AECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRI 227 (335)
T ss_dssp TTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCE-------EEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHH
T ss_pred CcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCC-------cEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHH
Confidence 111111222 23333 3456778888999887765 344445555666775544
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCc
Q 011931 195 ----GIEYGDMQLIAEAYDVLKSVGKLTNE-ELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKG 269 (474)
Q Consensus 195 ----~~~~~~~~~i~Ea~~l~~~~G~l~~~-~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~ 269 (474)
.....+..++.|+..++++.| ++.+ ++.+++...... .....++.+++...+. ...+|.+..
T Consensus 228 ~~~~~~~~l~~~~~~E~~~va~a~G-~~~~~~~~~~~~~~~~~--~~~~sSM~qD~~~gr~----~tEid~i~G------ 294 (335)
T 3ghy_A 228 LDDPLVSAFCLAVMAEAKAIGARIG-CPIEQSGEARSAVTRQL--GAFKTSMLQDAEAGRG----PLEIDALVA------ 294 (335)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHTTT-CCCCSCHHHHHHHHHTT--CSCCCTTTC-----CC----CCCHHHHTH------
T ss_pred hcChHHHHHHHHHHHHHHHHHHHcC-CCCCccHHHHHHHHhcc--CCCCcHHHHHHHcCCC----CchHHHHhh------
Confidence 245667789999999999998 7642 222222211111 1122344555544320 146777765
Q ss_pred cHHHHHHHHHHcCCCcccHHH
Q 011931 270 TGKWTVQQAADLSVAAPTIEE 290 (474)
Q Consensus 270 tg~~~~~~a~~~gv~~p~~~~ 290 (474)
+.++.|+++|+|+|..+.
T Consensus 295 ---~vv~~a~~~gv~~P~~~~ 312 (335)
T 3ghy_A 295 ---SVREIGLHVGVPTPQIDT 312 (335)
T ss_dssp ---HHHHHHHHHTCCCHHHHH
T ss_pred ---HHHHHHHHhCCCCCHHHH
Confidence 578999999999999843
No 71
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.68 E-value=6.2e-17 Score=152.35 Aligned_cols=161 Identities=14% Similarity=0.185 Sum_probs=118.9
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEE-EeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISV-YNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v-~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
+||||+|||+|.||..+|..|+++|++|++ |||++++++++.+... +....+..+.++. +|+||++||+.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g------~~~~~~~~~~~~~---aDvVilavp~~ 92 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFG------ASVKAVELKDALQ---ADVVILAVPYD 92 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHT------TTEEECCHHHHTT---SSEEEEESCGG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhC------CCcccChHHHHhc---CCEEEEeCChH
Confidence 468999999999999999999999999998 9999999988876532 3334455555666 99999999974
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCCc------------hhHHHHHHHHHHcCCeEE------ecCCCC-CcccccCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEWY------------ENTERREKAMAELGLLYL------GMGVSG-GEEGARHGP 145 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~------------~~~~~~~~~l~~~g~~~v------~~pvsg-g~~~a~~G~ 145 (474)
.+.+++.++.+ + ++++|||+++..+ ...+.+.+.+. +..++ .+++.. ++. ...++
T Consensus 93 -~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~~v~~~g~~-~~~~~ 166 (220)
T 4huj_A 93 -SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP--GAKVVKAFNTLPAAVLAADPD-KGTGS 166 (220)
T ss_dssp -GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST--TCEEEEESCSSCHHHHTSCSB-CSSCE
T ss_pred -HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC--CCCEEECCCCCCHHHhhhCcc-cCCCC
Confidence 78888888776 5 6899999998763 14455555543 22333 223333 322 22233
Q ss_pred --ccccCCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHH
Q 011931 146 --SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNF 188 (474)
Q Consensus 146 --~i~~gg~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~ 188 (474)
.++.|.++++.+.++++|+.+|.+ ++++|+.+.|..
T Consensus 167 ~~v~~~g~~~~~~~~v~~l~~~~G~~-------~~~~G~l~~a~~ 204 (220)
T 4huj_A 167 RVLFLSGNHSDANRQVAELISSLGFA-------PVDLGTLAASGP 204 (220)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHTTCE-------EEECCSHHHHHH
T ss_pred eeEEEeCCCHHHHHHHHHHHHHhCCC-------eEeeCChhhcch
Confidence 345566889999999999999987 589999887754
No 72
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.67 E-value=5.7e-17 Score=157.90 Aligned_cols=183 Identities=9% Similarity=0.058 Sum_probs=122.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
||||||||+|.||..|+..|+++ ++| .+|||++++.+++.+.. +. .+.+++++++. +|+||+|||+.
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~------g~-~~~~~~~~~~~---~DvVilav~~~- 69 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVY------GG-KAATLEKHPEL---NGVVFVIVPDR- 69 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHT------CC-CCCSSCCCCC------CEEECSCTT-
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHc------CC-ccCCHHHHHhc---CCEEEEeCChH-
Confidence 57999999999999999999988 999 59999999988876543 13 45667776665 99999999997
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCccccc--CCCccccCCCHHHHHHHHHHH
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGAR--HGPSLMPGGSFEAYKYIEDIL 163 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~--~G~~i~~gg~~~~~~~v~~ll 163 (474)
.+.+++.++. .++++||++|++.+....+.. ..+..+...++++++.... .+..++++++++.++.++++|
T Consensus 70 ~~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~----~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 142 (276)
T 2i76_A 70 YIKTVANHLN---LGDAVLVHCSGFLSSEIFKKS----GRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIA 142 (276)
T ss_dssp THHHHHTTTC---CSSCCEEECCSSSCGGGGCSS----SEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHH
T ss_pred HHHHHHHHhc---cCCCEEEECCCCCcHHHHHHh----hccccchhhhcCCCchhHHHhCCCeEEEEeChHHHHHHHHHH
Confidence 5777776654 578999999987665432111 1111223346666554333 333567778888899999999
Q ss_pred HHHhccCCCCCCceEEeCCchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHH
Q 011931 164 LKVAAQVPDSGPCVTYVSKGGSG---NFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNE 220 (474)
Q Consensus 164 ~~lg~~~~~~~~~~~~~g~~g~g---~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~ 220 (474)
+.+|.+ ++++++.+.. ...+++.|.+. .++.|+..++.+.| ++.+
T Consensus 143 ~~lG~~-------~~~v~~~~~~~~~~~~~l~~n~~~----~~~~~a~~~~~~~G-l~~~ 190 (276)
T 2i76_A 143 EEISGK-------YFVIPSEKKKAYHLAAVIASNFPV----ALAYLSKRIYTLLG-LDEP 190 (276)
T ss_dssp HHHCSC-------EEECCGGGHHHHHHHHHHHHTTHH----HHHHHHHHHHHTTT-CSCH
T ss_pred HHhCCC-------EEEECHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcC-CChH
Confidence 999965 4788764422 23466666543 35678888899898 9987
No 73
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.48 E-value=5.5e-18 Score=157.24 Aligned_cols=162 Identities=15% Similarity=0.130 Sum_probs=114.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.|+|+|||+|.||..+|.+|.+.|++|++|||+++ .+.+...+ +..+ ++.++++. +|+||++||+. +
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g-------~~~~-~~~~~~~~---aDvVilav~~~-~ 85 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRG-------AEVL-CYSEAASR---SDVIVLAVHRE-H 85 (201)
Confidence 46899999999999999999999999999999987 44443322 3334 67777776 99999999986 6
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchh------HHHHHHHHHHcCCeEEe-c---CCCCCcccccCCC--ccccCCCHH
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYEN------TERREKAMAELGLLYLG-M---GVSGGEEGARHGP--SLMPGGSFE 154 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~------~~~~~~~l~~~g~~~v~-~---pvsgg~~~a~~G~--~i~~gg~~~ 154 (474)
++.++ ++.+ +.++++|||++++.+.. .+.+.+.+.. ...+. + |......+...|. .+++|++++
T Consensus 86 ~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~--~~vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~ 161 (201)
T 2yjz_A 86 YDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG--AHVVKAFNTISAWALQSGTLDASRQVFVCGNDSK 161 (201)
Confidence 77776 4544 44789999999998632 1222222211 11111 1 1111111222222 577888999
Q ss_pred HHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHH
Q 011931 155 AYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMI 192 (474)
Q Consensus 155 ~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v 192 (474)
.++.++++|+.+|.+ ++++|+.|.|..+|.+
T Consensus 162 ~~~~v~~ll~~~G~~-------~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 162 AKDRVMDIARTLGLT-------PLDQGSLVAAKEIENY 192 (201)
Confidence 999999999999987 4899999999998865
No 74
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.66 E-value=6.5e-15 Score=145.86 Aligned_cols=257 Identities=13% Similarity=0.152 Sum_probs=161.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc----CCC---CccccCCHHHHHhhcCCCcEEEE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKE----GDL---PLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~----~~~---~~~~~~s~~e~~~~l~~~dvIil 79 (474)
+|||+|||+|.||+.+|..|+++|++|++|+|++ .+.+.+.+... +.. .+..++++++ +.. +|+||+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~---~D~vil 75 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGP---MDLVLV 75 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCC---CSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCC---CCEEEE
Confidence 4799999999999999999999999999999986 36665543210 000 1223345554 444 999999
Q ss_pred ecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHc----CCeEEecCCCCCcccccCCC-ccccC----
Q 011931 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL----GLLYLGMGVSGGEEGARHGP-SLMPG---- 150 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~v~~pvsgg~~~a~~G~-~i~~g---- 150 (474)
+||+. +++++++.+.+.+.++++||.+.|+.. ..+.+.+.+... ++.++.+-..+.-.....|+ .+.+|
T Consensus 76 avk~~-~~~~~l~~l~~~l~~~~~iv~l~nGi~-~~~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~ 153 (312)
T 3hn2_A 76 GLKTF-ANSRYEELIRPLVEEGTQILTLQNGLG-NEEALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLP 153 (312)
T ss_dssp CCCGG-GGGGHHHHHGGGCCTTCEEEECCSSSS-HHHHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSC
T ss_pred ecCCC-CcHHHHHHHHhhcCCCCEEEEecCCCC-cHHHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCC
Confidence 99985 788999999999999999999999873 223444444322 12222232222111112223 33333
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHH---------------------HHHHHHHHHHHHHH
Q 011931 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNG---------------------IEYGDMQLIAEAYD 209 (474)
Q Consensus 151 g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~---------------------~~~~~~~~i~Ea~~ 209 (474)
.+.+..+.+.++|+..+.+ +....+.-...+-|++.|. ....+..++.|+..
T Consensus 154 ~~~~~~~~l~~~l~~~g~~-------~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~ 226 (312)
T 3hn2_A 154 RDTGRIEELAAMFRQAGVD-------CRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIA 226 (312)
T ss_dssp CCSHHHHHHHHHHHHTTCC-------EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHhCCCC-------cEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHH
Confidence 3466778888999887754 3444456666677776664 33446678899999
Q ss_pred HHHHhC---CCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcc
Q 011931 210 VLKSVG---KLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAP 286 (474)
Q Consensus 210 l~~~~G---~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p 286 (474)
++++.| .++.+.+..++....... ....++.+++.+.+. ..+|.+.. +.++.|+++|+|+|
T Consensus 227 va~a~G~~~~~~~~~~~~~~~~~~~~~--~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~~P 290 (312)
T 3hn2_A 227 GANAQGLATFIADGYVDDMLEFTDAMG--EYKPSMEIDREEGRP-----LEIAAIFR---------TPLAYGAREGIAMP 290 (312)
T ss_dssp HHHTSCCSSCCCTTHHHHHHHHHTTSC--SCCCHHHHHHHTTCC-----CCHHHHTH---------HHHHHHHHTTCCCH
T ss_pred HHHHcCCccCCCHHHHHHHHHHHhcCC--CCCchHHHHHHhCCC-----ccHHHHhh---------HHHHHHHHhCCCCC
Confidence 999886 234333333333222211 122345556554332 46777754 57899999999999
Q ss_pred cHHHHHHH
Q 011931 287 TIEERVEA 294 (474)
Q Consensus 287 ~~~~r~~~ 294 (474)
..+.=+..
T Consensus 291 ~~~~l~~l 298 (312)
T 3hn2_A 291 RVEMLATL 298 (312)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98554333
No 75
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.65 E-value=2.2e-15 Score=148.33 Aligned_cols=180 Identities=17% Similarity=0.193 Sum_probs=133.7
Q ss_pred CcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 6 QLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 6 ~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
++++|+||| +|.||.++|..|++.|++|++|||+++. ++.+++.. +|+||+|||+.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~---aDvVilavp~~ 76 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILAN---ADVVIVSVPIN 76 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTT---CSEEEECSCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcC---CCEEEEeCCHH
Confidence 346899999 9999999999999999999999998641 34455666 99999999986
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec-CCCCCcccccCCC-cccc-CCCHHHHHHHHH
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM-GVSGGEEGARHGP-SLMP-GGSFEAYKYIED 161 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~-pvsgg~~~a~~G~-~i~~-gg~~~~~~~v~~ 161 (474)
.+.+++.++.+.++++.+|+|++++.....+.+.+. .+.++++. |++|.+.....|. .++. +.+++.++.+++
T Consensus 77 -~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~---~~~~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~~v~~ 152 (298)
T 2pv7_A 77 -LTLETIERLKPYLTENMLLADLTSVKREPLAKMLEV---HTGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLE 152 (298)
T ss_dssp -GHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHH---CSSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHH
T ss_pred -HHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHh---cCCCEEeeCCCCCCCchhhcCCeEEEecCCCHHHHHHHHH
Confidence 699999999999999999999988875544444332 34678874 8887765555676 4443 447888999999
Q ss_pred HHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Q 011931 162 ILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQN 224 (474)
Q Consensus 162 ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~ 224 (474)
+|+.+|.+ ++++++......++++.+.-.+.... +.+++ ...| ++.++..+
T Consensus 153 l~~~~G~~-------~~~~~~~~~d~~~a~~~~~p~~~a~~-l~~~l---~~~g-~~~~~~~~ 203 (298)
T 2pv7_A 153 QIQIWGAK-------IYQTNATEHDHNMTYIQALRHFSTFA-NGLHL---SKQP-INLANLLA 203 (298)
T ss_dssp HHHHTTCE-------EEECCHHHHHHHHHHHTHHHHHHHHH-HHHHH---TTSS-CCHHHHHH
T ss_pred HHHHcCCE-------EEECCHHHHHHHHHHHHHHHHHHHHH-HHHHH---HhcC-CCHHHHHh
Confidence 99999976 46777666677777777765443332 23332 2356 77765544
No 76
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.65 E-value=2.5e-15 Score=149.36 Aligned_cols=250 Identities=16% Similarity=0.116 Sum_probs=162.8
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhh-----cCCC---CccccCCHHHHHhhcCCCcEEE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKK-----EGDL---PLFGFRDPESFVNSIQKPRVII 78 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~-----~~~~---~~~~~~s~~e~~~~l~~~dvIi 78 (474)
+|||+|||+|.||+.+|..|+++|++|++|+|++ .+.+.+.+.. .+.. .+..+.+++++.+. +|+||
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~---~DlVi 76 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETK---PDCTL 76 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSC---CSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCC---CCEEE
Confidence 4799999999999999999999999999999986 3556554310 0000 12234566666544 99999
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc------ccccCCC-cccc--
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE------EGARHGP-SLMP-- 149 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~------~~a~~G~-~i~~-- 149 (474)
+|||.. +++++++.+.+.+.++++||.+.++.... +.+.+.+... .++.+++..+. +-...++ .+.+
T Consensus 77 lavK~~-~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~-~~l~~~~~~~--~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~ 152 (320)
T 3i83_A 77 LCIKVV-EGADRVGLLRDAVAPDTGIVLISNGIDIE-PEVAAAFPDN--EVISGLAFIGVTRTAPGEIWHQAYGRLMLGN 152 (320)
T ss_dssp ECCCCC-TTCCHHHHHTTSCCTTCEEEEECSSSSCS-HHHHHHSTTS--CEEEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred EecCCC-ChHHHHHHHHhhcCCCCEEEEeCCCCChH-HHHHHHCCCC--cEEEEEEEeceEEcCCCEEEECCCCEEEEec
Confidence 999996 67889999999999999999999886322 3344444322 34444433211 1111223 3333
Q ss_pred --CCCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH--------------------HHHHHHHHHHH
Q 011931 150 --GGSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI--------------------EYGDMQLIAEA 207 (474)
Q Consensus 150 --gg~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~--------------------~~~~~~~i~Ea 207 (474)
+.+.+..+.+.++|+.-+.+ +.+..+.-...+.|++.|.. ...+..++.|+
T Consensus 153 ~~~~~~~~~~~l~~~l~~~~~~-------~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~E~ 225 (320)
T 3i83_A 153 YPGGVSERVKTLAAAFEEAGID-------GIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQEI 225 (320)
T ss_dssp SSSCCCHHHHHHHHHHHHTTSC-------EEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHhCCCC-------ceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHHHH
Confidence 34566778889999887765 35555677777888877632 23456789999
Q ss_pred HHHHHHhCCCCHH--HHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCc
Q 011931 208 YDVLKSVGKLTNE--ELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAA 285 (474)
Q Consensus 208 ~~l~~~~G~l~~~--~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~ 285 (474)
..++++.| ++.+ .+..++....... ....++.+++...+. ..+|.+.. +.++.|+++|+|+
T Consensus 226 ~~va~a~G-~~l~~~~~~~~~~~~~~~~--~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~~ 288 (320)
T 3i83_A 226 RAVAAANG-HPLPEDIVEKNVASTYKMP--PYKTSMLVDFEAGQP-----METEVILG---------NAVRAGRRTRVAI 288 (320)
T ss_dssp HHHHHHTT-CCCCTTHHHHHHHHHHHSC--CCCCHHHHHHHHTCC-----CCHHHHTH---------HHHHHHHHTTCCC
T ss_pred HHHHHHcC-CCCChHHHHHHHHHHhcCC--CCCCcHHHHHHhCCC-----chHHHHcc---------HHHHHHHHhCCCC
Confidence 99999998 7632 2222222111111 112244455554332 35777755 5789999999999
Q ss_pred ccHH
Q 011931 286 PTIE 289 (474)
Q Consensus 286 p~~~ 289 (474)
|..+
T Consensus 289 P~~~ 292 (320)
T 3i83_A 289 PHLE 292 (320)
T ss_dssp HHHH
T ss_pred CHHH
Confidence 9983
No 77
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.64 E-value=1.9e-15 Score=165.13 Aligned_cols=190 Identities=14% Similarity=0.206 Sum_probs=134.5
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhh-------hhcCCC----------CccccCCHHHHH
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERA-------KKEGDL----------PLFGFRDPESFV 68 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~-------~~~~~~----------~~~~~~s~~e~~ 68 (474)
.++||||||+|.||.+||.+|+++||+|++||+++++++...+.. ...|.. +++.++++ +.+
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 391 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDF 391 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTG
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHH
Confidence 457899999999999999999999999999999999877642210 000000 13455666 555
Q ss_pred hhcCCCcEEEEecCCChhHH-HHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCCcccccC
Q 011931 69 NSIQKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEGARH 143 (474)
Q Consensus 69 ~~l~~~dvIil~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~v~~pvsgg~~~a~~ 143 (474)
+. ||+||+|||++.+++ .++.++.+.++++.+|++.+++.+.+ ++++.+.. .|.||++ |+. .
T Consensus 392 ~~---aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~--~la~~~~~~~~~ig~hf~~-P~~-------~ 458 (715)
T 1wdk_A 392 GN---VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISIS--LLAKALKRPENFVGMHFFN-PVH-------M 458 (715)
T ss_dssp GG---CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH--HHGGGCSCGGGEEEEECCS-STT-------T
T ss_pred CC---CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHH--HHHHHhcCccceEEEEccC-Ccc-------c
Confidence 65 999999999986665 46688888899999998776665443 33332211 2445544 332 2
Q ss_pred CC--ccccCC--CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCH
Q 011931 144 GP--SLMPGG--SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTN 219 (474)
Q Consensus 144 G~--~i~~gg--~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~ 219 (474)
++ .++.|. ++++++.+.++++.+|.. ++++++. .|. +.|.+.. ..++|++.++++ | +++
T Consensus 459 ~~lvevv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~d~-~Gf----i~Nril~---~~~~Ea~~l~~~-G-~~~ 521 (715)
T 1wdk_A 459 MPLVEVIRGEKSSDLAVATTVAYAKKMGKN-------PIVVNDC-PGF----LVNRVLF---PYFGGFAKLVSA-G-VDF 521 (715)
T ss_dssp CCEEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEEESC-TTT----THHHHHH---HHHHHHHHHHHT-T-CCH
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHhCCE-------eEEEcCC-CCh----hhhHHHH---HHHHHHHHHHHC-C-CCH
Confidence 33 355554 899999999999999976 4777763 444 3455443 467999999997 8 999
Q ss_pred HHHHHHH
Q 011931 220 EELQNVF 226 (474)
Q Consensus 220 ~~~~~~~ 226 (474)
+++.+++
T Consensus 522 ~~id~~~ 528 (715)
T 1wdk_A 522 VRIDKVM 528 (715)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999987
No 78
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.63 E-value=2.4e-15 Score=164.58 Aligned_cols=191 Identities=13% Similarity=0.179 Sum_probs=135.9
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhh-------hhcC----------CCCccccCCHHHHH
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERA-------KKEG----------DLPLFGFRDPESFV 68 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~-------~~~~----------~~~~~~~~s~~e~~ 68 (474)
.++||+|||+|.||.+||.+|+++||+|++||++++++++..+.. ...+ ..+++.++++ +.+
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 389 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESF 389 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGG
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHH
Confidence 467899999999999999999999999999999999877653310 0000 0024556666 344
Q ss_pred hhcCCCcEEEEecCCChhHH-HHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCCcccccC
Q 011931 69 NSIQKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEGARH 143 (474)
Q Consensus 69 ~~l~~~dvIil~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~v~~pvsgg~~~a~~ 143 (474)
+. ||+||+|||+...++ .++.++.+.++++.+|++.+++.+.+ ++++.+.. .|.||++ |+..
T Consensus 390 ~~---aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~--~la~~~~~p~~~iG~hf~~-P~~~------- 456 (725)
T 2wtb_A 390 RD---VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLN--KIGERTKSQDRIVGAHFFS-PAHI------- 456 (725)
T ss_dssp TT---CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH--HHTTTCSCTTTEEEEEECS-STTT-------
T ss_pred CC---CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHH--HHHHHhcCCCCEEEecCCC-Cccc-------
Confidence 55 999999999986654 56688888899999998776665543 23332211 2556655 4332
Q ss_pred CC--ccccCC--CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCH
Q 011931 144 GP--SLMPGG--SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTN 219 (474)
Q Consensus 144 G~--~i~~gg--~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~ 219 (474)
++ .++.|. ++++++.+.++++.+|.. ++++++. .|. +.|.+.. ..++|++.++++ | +++
T Consensus 457 ~~lvevv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~d~-~Gf----i~Nril~---~~~~Ea~~l~~~-G-~~~ 519 (725)
T 2wtb_A 457 MPLLEIVRTNHTSAQVIVDLLDVGKKIKKT-------PVVVGNC-TGF----AVNRMFF---PYTQAAMFLVEC-G-ADP 519 (725)
T ss_dssp CCEEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEEESS-TTT----THHHHHH---HHHHHHHHHHHT-T-CCH
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHhCCE-------EEEECCC-ccH----HHHHHHH---HHHHHHHHHHHC-C-CCH
Confidence 23 345553 899999999999999976 4777763 444 3455443 468999999998 8 999
Q ss_pred HHHHHHHH
Q 011931 220 EELQNVFT 227 (474)
Q Consensus 220 ~~~~~~~~ 227 (474)
+++.+++.
T Consensus 520 e~id~~~~ 527 (725)
T 2wtb_A 520 YLIDRAIS 527 (725)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999873
No 79
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.63 E-value=6.1e-15 Score=153.73 Aligned_cols=191 Identities=15% Similarity=0.226 Sum_probs=133.3
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh-----------hhhcC----CCCccccCCHHHHHhh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER-----------AKKEG----DLPLFGFRDPESFVNS 70 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-----------~~~~~----~~~~~~~~s~~e~~~~ 70 (474)
.+++|+|||+|.||.+||..|+++|++|++||+++++++...+. +.... ......+++++ .++.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~ 114 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELST 114 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGG-GGTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHH-HHCC
Confidence 35789999999999999999999999999999999887765432 10000 00122345663 3444
Q ss_pred cCCCcEEEEecCCChhH-HHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHH----cCCeEEecCCCCCcccccCCC
Q 011931 71 IQKPRVIIMLVKAGAPV-DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAE----LGLLYLGMGVSGGEEGARHGP 145 (474)
Q Consensus 71 l~~~dvIil~vp~~~~v-~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~----~g~~~v~~pvsgg~~~a~~G~ 145 (474)
||+||+|||...++ ..++.++.+.++++.+|++.+++. ..+ ++++.+.. .|.||+ .|+.. ++
T Consensus 115 ---aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~-~~~-~la~~~~~~~~~ig~hf~-~P~~~-------~~ 181 (463)
T 1zcj_A 115 ---VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL-NVD-DIASSTDRPQLVIGTHFF-SPAHV-------MR 181 (463)
T ss_dssp ---CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS-CHH-HHHTTSSCGGGEEEEEEC-SSTTT-------CC
T ss_pred ---CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCc-CHH-HHHHHhcCCcceEEeecC-CCccc-------ce
Confidence 99999999987544 456688888899999999844443 333 45443321 255665 44432 23
Q ss_pred --ccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH
Q 011931 146 --SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEE 221 (474)
Q Consensus 146 --~i~~g--g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~ 221 (474)
.++.| ++++.++.+.++++.+|.. ++++++ ..|. +.|.+... .++|++.++++ | +++++
T Consensus 182 lvevv~g~~t~~e~~~~~~~l~~~lGk~-------~v~v~~-~~gf----i~Nrll~~---~~~ea~~l~~~-G-~~~~~ 244 (463)
T 1zcj_A 182 LLEVIPSRYSSPTTIATVMSLSKKIGKI-------GVVVGN-CYGF----VGNRMLAP---YYNQGFFLLEE-G-SKPED 244 (463)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCE-------EEEBCC-STTT----THHHHHHH---HHHHHHHHHHT-T-CCHHH
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHhCCE-------EEEECC-CccH----HHHHHHHH---HHHHHHHHHHc-C-CCHHH
Confidence 34554 6899999999999999965 477775 3444 44555443 45999999887 8 99999
Q ss_pred HHHHHH
Q 011931 222 LQNVFT 227 (474)
Q Consensus 222 ~~~~~~ 227 (474)
+.+++.
T Consensus 245 id~~~~ 250 (463)
T 1zcj_A 245 VDGVLE 250 (463)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 80
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.62 E-value=5.8e-15 Score=145.61 Aligned_cols=194 Identities=15% Similarity=0.190 Sum_probs=138.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-------hcC----CC-------CccccCCHHHHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-------KEG----DL-------PLFGFRDPESFV 68 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------~~~----~~-------~~~~~~s~~e~~ 68 (474)
..||+|||+|.||..+|..++.+|++|++||++++.+++..+... ..+ .. ++..++++++++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 458999999999999999999999999999999987654432211 000 00 345667888877
Q ss_pred hhcCCCcEEEEecCCChhHH-HHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHc----CCeEEecC-CCCCccccc
Q 011931 69 NSIQKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL----GLLYLGMG-VSGGEEGAR 142 (474)
Q Consensus 69 ~~l~~~dvIil~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~v~~p-vsgg~~~a~ 142 (474)
+. ||+||.+||..-+++ +++.+|.+.++++.|+...|++.+.+ ++++.+... |.||+..| +..-.+
T Consensus 86 ~~---ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is--~ia~~~~~p~r~ig~HffNP~~~m~LVE--- 157 (319)
T 3ado_A 86 EG---VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS--KLFTGLAHVKQCIVAHPVNPPYYIPLVE--- 157 (319)
T ss_dssp TT---EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH--HHHTTCTTGGGEEEEEECSSTTTCCEEE---
T ss_pred cc---CcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccch--hhhhhccCCCcEEEecCCCCccccchHH---
Confidence 77 999999999988777 45588888888888887777776543 344333221 55666543 222111
Q ss_pred CCCccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHH
Q 011931 143 HGPSLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNE 220 (474)
Q Consensus 143 ~G~~i~~g--g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~ 220 (474)
++.| .+++.++.+..+++.+|.++ +.+-....|+. .|.+. ..+++|++.+.+..+ .+++
T Consensus 158 ----iv~g~~Ts~~~~~~~~~~~~~~gk~p-------v~v~kd~pGFi----~NRl~---~~~~~EA~~lv~eGv-as~e 218 (319)
T 3ado_A 158 ----LVPHPETSPATVDRTHALMRKIGQSP-------VRVLKEIDGFV----LNRLQ---YAIISEAWRLVEEGI-VSPS 218 (319)
T ss_dssp ----EEECTTCCHHHHHHHHHHHHHTTCEE-------EECSSCCTTTT----HHHHH---HHHHHHHHHHHHTTS-SCHH
T ss_pred ----hcCCCCCcHHHHHHHHHHHHHhCCcc-------CCcCCCCCCEe----HHHHH---HHHHHHHHHHHHhCC-CCHH
Confidence 4544 48999999999999999763 44444455654 45554 456699999999987 9999
Q ss_pred HHHHHHH
Q 011931 221 ELQNVFT 227 (474)
Q Consensus 221 ~~~~~~~ 227 (474)
+++.++.
T Consensus 219 dID~~~~ 225 (319)
T 3ado_A 219 DLDLVMS 225 (319)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999873
No 81
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.61 E-value=9.1e-16 Score=143.17 Aligned_cols=152 Identities=15% Similarity=0.169 Sum_probs=112.8
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.+|+|+|||+|.||..+|..|+++|++|++|||+++ .++. +|+||+|+|+ .
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-------------------------~~~~---aD~vi~av~~-~ 68 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------------------ATTL---GEIVIMAVPY-P 68 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-------------------------CSSC---CSEEEECSCH-H
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-------------------------Hhcc---CCEEEEcCCc-H
Confidence 467999999999999999999999999999998854 1123 8999999995 5
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCc-h--------h----HHHHHHHHHHcCCeEEe------cCCCCCcccccCCC-
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWY-E--------N----TERREKAMAELGLLYLG------MGVSGGEEGARHGP- 145 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~-~--------~----~~~~~~~l~~~g~~~v~------~pvsgg~~~a~~G~- 145 (474)
.++++++++.+.++ +++||+++++.+ . . .+.+.+.+. +.+++. +|..+.+.....++
T Consensus 69 ~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~p~~~~~~~~g~~~~ 145 (209)
T 2raf_A 69 ALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP--DSQVLKAFNTTFAATLQSGQVNGKEPT 145 (209)
T ss_dssp HHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT--TSEEEECSTTSCHHHHHHSEETTTEEC
T ss_pred HHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC--CCcEEEeeecccHhhccccccCCCCCc
Confidence 88999999888887 999999999654 1 1 344444432 467777 33322222111123
Q ss_pred ccccCC-CHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH
Q 011931 146 SLMPGG-SFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI 196 (474)
Q Consensus 146 ~i~~gg-~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~ 196 (474)
.++++| +++..+.++++|+.+|.+ ++++++.+.+..+|++.|.+
T Consensus 146 ~~~~~g~~~~~~~~v~~ll~~~G~~-------~~~~~~i~~a~~~K~i~~l~ 190 (209)
T 2raf_A 146 TVLVAGNDDSAKQRFTRALADSPLE-------VKDAGKLKRARELEAMGFMQ 190 (209)
T ss_dssp EEEEEESCHHHHHHHHHHTTTSSCE-------EEEEESGGGHHHHHHHHHHH
T ss_pred eeEEcCCCHHHHHHHHHHHHHcCCc-------eEeCCCHhHHHHhcchHHHH
Confidence 445555 568899999999999976 58899999999999987764
No 82
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.61 E-value=5.6e-16 Score=145.26 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=117.3
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
++|+|+|||+|.||..++..|++.|++|+++||++++.+++.+.+ +... +.+++++. +|+||+|+|+.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-------~~~~-~~~~~~~~---~DvVi~av~~~- 94 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSA-------AQVT-FQEEAVSS---PEVIFVAVFRE- 94 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTT-------SEEE-EHHHHTTS---CSEEEECSCGG-
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------Ccee-cHHHHHhC---CCEEEECCChH-
Confidence 457999999999999999999999999999999998877665432 3333 67777666 99999999974
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHH----HHHHHHH--cCCeEEec--CCCCCc--ccccCCC--ccccCCCH
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTER----REKAMAE--LGLLYLGM--GVSGGE--EGARHGP--SLMPGGSF 153 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~----~~~~l~~--~g~~~v~~--pvsgg~--~~a~~G~--~i~~gg~~ 153 (474)
.++.+++ +.+.+ ++++|||++++.+..+.. ..+.+.+ .+.+++.+ ++++.. ++...|. .++.|+++
T Consensus 95 ~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~ 172 (215)
T 2vns_A 95 HYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNVISAWTLQAGPRDGNRQVPICGDQP 172 (215)
T ss_dssp GSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTTBCHHHHHTCSCSSCCEEEEEESCH
T ss_pred HHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEeccccccHhHhcccccCCceeEEEecCCH
Confidence 5666664 55555 899999999998654321 1122221 12233321 111110 1222344 56778899
Q ss_pred HHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHH
Q 011931 154 EAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMI 192 (474)
Q Consensus 154 ~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v 192 (474)
+.++.++++|+.+|.+ ++++|+.|+|+.++..
T Consensus 173 ~~~~~v~~ll~~~G~~-------~~~~g~~~~~~~~e~~ 204 (215)
T 2vns_A 173 EAKRAVSEMALAMGFM-------PVDMGSLASAWEVEAM 204 (215)
T ss_dssp HHHHHHHHHHHHTTCE-------EEECCSGGGHHHHHHS
T ss_pred HHHHHHHHHHHHcCCc-------eEeecchhhhhHhhhh
Confidence 9999999999999976 5899999999987643
No 83
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.53 E-value=3.2e-15 Score=146.77 Aligned_cols=246 Identities=14% Similarity=0.145 Sum_probs=152.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHH-hhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFV-NSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~-~~l~~~dvIil~vp~~~ 85 (474)
+|||+|||+|.||+.+|..|+++|++|++|+|+++.++.....+. .......++.+.+ .. +|+||+|||+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~---~D~vilavk~~- 73 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHA----PAQDIVVKGYEDVTNT---FDVIIIAVKTH- 73 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTS----CCEEEEEEEGGGCCSC---EEEEEECSCGG-
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCe----eccceecCchHhcCCC---CCEEEEeCCcc-
Confidence 579999999999999999999999999999999764431111110 0111222333332 33 89999999985
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHc----CCeEEecCCCCCcccccCCC-ccccCCCHHHHHHHH
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL----GLLYLGMGVSGGEEGARHGP-SLMPGGSFEAYKYIE 160 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~v~~pvsgg~~~a~~G~-~i~~gg~~~~~~~v~ 160 (474)
+++++++.+.+.+.++++||...++...... +... ++.++.+-..| |..+..++ .+.. ++.+..+.+.
T Consensus 74 ~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~-----~~~~~v~~g~~~~~a~~~~-pg~v~~~~~~~~~-~~~~~~~~l~ 146 (294)
T 3g17_A 74 QLDAVIPHLTYLAHEDTLIILAQNGYGQLEH-----IPFKNVCQAVVYISGQKKG-DVVTHFRDYQLRI-QDNALTRQFR 146 (294)
T ss_dssp GHHHHGGGHHHHEEEEEEEEECCSSCCCGGG-----CCCSCEEECEEEEEEEEET-TEEEEEEEEEEEE-ECSHHHHHHH
T ss_pred CHHHHHHHHHHhhCCCCEEEEeccCcccHhh-----CCCCcEEEEEEEEEEEEcC-CCEEEECCCEEec-CccHHHHHHH
Confidence 8999999999999889999999998754332 2111 11111111111 11111122 2222 3445566777
Q ss_pred HHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHhCCCC--
Q 011931 161 DILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNG--------------------IEYGDMQLIAEAYDVLKSVGKLT-- 218 (474)
Q Consensus 161 ~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~--------------------~~~~~~~~i~Ea~~l~~~~G~l~-- 218 (474)
++|+.-+.+ +.+..+.-...+-|++.|. ....+..++.|+..++++.| ++
T Consensus 147 ~~l~~~~~~-------~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G-~~l~ 218 (294)
T 3g17_A 147 DLVQDSQID-------IVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEG-LNFS 218 (294)
T ss_dssp HHTTTSSCE-------EEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTT-CCCC
T ss_pred HHHHhCCCc-------eEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcC-CCCC
Confidence 777765543 3555566677778887775 23345678899999999998 75
Q ss_pred HHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHHH
Q 011931 219 NEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIEE 290 (474)
Q Consensus 219 ~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~~ 290 (474)
++.+.+.+........ ....++.+++.+.+. ..+|.+.. +.++.|+++|+|+|..+.
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~~P~~~~ 275 (294)
T 3g17_A 219 EQTVDTIMTIYQGYPD-EMGTSMYYDIVHQQP-----LEVEAIQG---------FIYRRAREHNLDTPYLDT 275 (294)
T ss_dssp HHHHHHHHHHHHTSCT-TCCCHHHHHHHTTCC-----CSGGGTHH---------HHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHHhhcCC-CCCCcHHHHHHcCCC-----ccHHHhhh---------HHHHHHHHhCCCCChHHH
Confidence 4444444433222111 122345556554432 35666654 578999999999999844
No 84
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.53 E-value=7.6e-14 Score=131.15 Aligned_cols=156 Identities=10% Similarity=0.110 Sum_probs=115.5
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
..|||+|||+|.||.+||.+|.++||+|++||+.. + +.. +| |+|||+.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~-------------------------~-~~~---aD--ilavP~~- 52 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE-------------------------D-IRD---FE--LVVIDAH- 52 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG-------------------------G-GGG---CS--EEEECSS-
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH-------------------------H-hcc---CC--EEEEcHH-
Confidence 45799999999999999999999999999999830 1 233 89 9999997
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCCcccccCCCccccCCCHHHHHHHHHHHH
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGGEEGARHGPSLMPGGSFEAYKYIEDILL 164 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~-~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~ 164 (474)
.+.+++.++.+.+.++++|+|+|++..... .+.+..+|.+|++ .|+.|.+ .++.++++++++.++++++
T Consensus 53 ai~~vl~~l~~~l~~g~ivvd~sgs~~~~v---l~~~~~~g~~fvg~HPm~g~~-------~~i~a~d~~a~~~l~~L~~ 122 (232)
T 3dfu_A 53 GVEGYVEKLSAFARRGQMFLHTSLTHGITV---MDPLETSGGIVMSAHPIGQDR-------WVASALDELGETIVGLLVG 122 (232)
T ss_dssp CHHHHHHHHHTTCCTTCEEEECCSSCCGGG---GHHHHHTTCEEEEEEEEETTE-------EEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCcCHHHH---HHHHHhCCCcEEEeeeCCCCc-------eeeeCCCHHHHHHHHHHHH
Confidence 899999999999999999999876654432 2334467889986 6886543 3444558889999999999
Q ss_pred HHhccCCCCCCceEEeCCchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 011931 165 KVAAQVPDSGPCVTYVSKGGSGNF-VKMIHNGIEYGDMQLIAEAYDVLKS 213 (474)
Q Consensus 165 ~lg~~~~~~~~~~~~~g~~g~g~~-~K~v~N~~~~~~~~~i~Ea~~l~~~ 213 (474)
.+|.+ ++++++...-.+ .-.+| ......++.++..+.+.
T Consensus 123 ~lG~~-------vv~~~~~~hd~~~AAvsh---~nhLv~L~~~A~~ll~~ 162 (232)
T 3dfu_A 123 ELGGS-------IVEIADDKRAQLAAALTY---AGFLSTLQRDASYFLDE 162 (232)
T ss_dssp HTTCE-------ECCCCGGGHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred HhCCE-------EEEeCHHHHhHHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 99987 467776443333 11222 33345666777777643
No 85
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.48 E-value=3.7e-14 Score=147.59 Aligned_cols=117 Identities=9% Similarity=0.145 Sum_probs=96.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH---HhCCCcchhhhHHHHHHHHhhCCCCCCC
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARI---WKGGCIIRAVFLDRIKKAYDRNADLANL 386 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~i---W~~gcii~s~ll~~~~~~~~~~~~l~~l 386 (474)
+.+++||+||+||++++++|+.++|+|.++++ ..++|..+++++ |+.| .++|++++...+++.+++.....
T Consensus 177 ~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~-----~~Gld~~~l~~v~~~w~~G-~~~S~l~e~~~~~l~~~D~~g~~ 250 (484)
T 4gwg_A 177 DEGAGHFVKMVHNGIEYGDMQLICEAYHLMKD-----VLGMAQDEMAQAFEDWNKT-ELDSFLIEITANILKFQDTDGKH 250 (484)
T ss_dssp ETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TSCCCHHHHHHHHHHHTTT-TTCBHHHHHHHHHHHCBCTTSSB
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHHcCC-CccchHHHHHHHHHhcCCccCCc
Confidence 46899999999999999999999999999986 245887666555 9998 68999999999999864433456
Q ss_pred ccChHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCC
Q 011931 387 LVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA--YFDSYRRER 434 (474)
Q Consensus 387 l~~~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~--y~~~~~~~~ 434 (474)
++|.+.+..-+++++ +|++++|+++|+|+|+|++||. ++++++.+|
T Consensus 251 ~ld~i~d~~~~kgtG--~wt~~~A~~~gvp~p~i~~av~~R~~S~~k~~r 298 (484)
T 4gwg_A 251 LLPKIRDSAGQKGTG--KWTAISALEYGVPVTLIGEAVFARCLSSLKDER 298 (484)
T ss_dssp SGGGSCCCCCSSCTT--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHH
T ss_pred cHHHHhccccCcchH--HHHHHHHHHcCCCchHHHHHHHHHHHhhchHHH
Confidence 777777777789999 9999999999999999999996 444455443
No 86
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.48 E-value=2.3e-13 Score=136.15 Aligned_cols=193 Identities=15% Similarity=0.104 Sum_probs=124.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.|+|+|||+|.||.++|.+|.+.|++|++|||++++..+..... ++..+ +++++++. +|+||+|||+. .
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~------G~~~~-~~~e~~~~---aDvVilavp~~-~ 84 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAH------GLKVA-DVKTAVAA---ADVVMILTPDE-F 84 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHT------TCEEE-CHHHHHHT---CSEEEECSCHH-H
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHC------CCEEc-cHHHHHhc---CCEEEEeCCcH-H
Confidence 46899999999999999999999999999999987633333221 24444 88888887 99999999986 6
Q ss_pred HHHHHH-HHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCCcccc-------cCCC-cc-cc--CCCH
Q 011931 87 VDETIK-TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGGEEGA-------RHGP-SL-MP--GGSF 153 (474)
Q Consensus 87 v~~vl~-~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~-~pvsgg~~~a-------~~G~-~i-~~--gg~~ 153 (474)
...++. ++.+.++++++|+|+++.. . .+.......++.++. +| +| +..+ ..|. .+ .+ +.++
T Consensus 85 ~~~v~~~~i~~~l~~~~ivi~~~gv~---~-~~~~~~~~~~~~vv~~~P-~g-p~~a~~~l~~~G~g~~~ii~~~~~~~~ 158 (338)
T 1np3_A 85 QGRLYKEEIEPNLKKGATLAFAHGFS---I-HYNQVVPRADLDVIMIAP-KA-PGHTVRSEFVKGGGIPDLIAIYQDASG 158 (338)
T ss_dssp HHHHHHHHTGGGCCTTCEEEESCCHH---H-HTTSSCCCTTCEEEEEEE-SS-CSHHHHHHHHTTCCCCEEEEEEECSSS
T ss_pred HHHHHHHHHHhhCCCCCEEEEcCCch---h-HHHhhcCCCCcEEEeccC-CC-CchhHHHHHhccCCCeEEEEecCCCCH
Confidence 688888 9999999999999986421 1 221111123556665 35 32 2221 1255 33 33 3467
Q ss_pred HHHHHHHHHHHHHhc-cCCCCCCceEEeCCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHH
Q 011931 154 EAYKYIEDILLKVAA-QVPDSGPCVTYVSKGGSGNFVKMIHN-GIEYGDMQLIAEAYDVLKSVGKLTNEEL 222 (474)
Q Consensus 154 ~~~~~v~~ll~~lg~-~~~~~~~~~~~~g~~g~g~~~K~v~N-~~~~~~~~~i~Ea~~l~~~~G~l~~~~~ 222 (474)
++.+.+..+++.+|. +. .++.+...........+.+ .+......+++.++..+.+.| ++++..
T Consensus 159 ~a~~~~~~l~~~lG~~~a-----gv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~G-l~~~~a 223 (338)
T 1np3_A 159 NAKNVALSYACGVGGGRT-----GIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAG-YAPEMA 223 (338)
T ss_dssp CHHHHHHHHHHHTTHHHH-----CEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTT-CCHHHH
T ss_pred HHHHHHHHHHHHcCCCcc-----ceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcC-CCHHHH
Confidence 888999999999997 30 0244433222222333333 222223344455555556788 998765
No 87
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.46 E-value=3.4e-14 Score=143.53 Aligned_cols=272 Identities=12% Similarity=-0.009 Sum_probs=161.3
Q ss_pred cEEEEcccHhHHHHHHHHHHCCC--------cEEEEeCChHH-----HHHHHHhhhhcC---C----CCccccCCHHHHH
Q 011931 9 RIGLAGLAVMGQNLALNIAEKGF--------PISVYNRTTSK-----VDETVERAKKEG---D----LPLFGFRDPESFV 68 (474)
Q Consensus 9 ~IgiIGlG~mG~~lA~~L~~~G~--------~V~v~dr~~~~-----~~~l~~~~~~~~---~----~~~~~~~s~~e~~ 68 (474)
||+|||.|.||++||..|+++|+ +|.+|.|+++. .+.+.....+.. + .++..++++++++
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 89999999999999999999875 49999998653 333332221110 0 0467788999998
Q ss_pred hhcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhH---HHHHHHHHH-cCCe--EEecCCCCCccccc
Q 011931 69 NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENT---ERREKAMAE-LGLL--YLGMGVSGGEEGAR 142 (474)
Q Consensus 69 ~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~---~~~~~~l~~-~g~~--~v~~pvsgg~~~a~ 142 (474)
+. +|+||++||. +.++.+++++.+.+.++.++|.++.+....+ +.+.+.+.+ .+.. ++..|-. ..+-+.
T Consensus 116 ~~---ad~ii~avPs-~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~~~~vLsGPs~-A~EVa~ 190 (391)
T 4fgw_A 116 KD---VDIIVFNIPH-QFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGIQCGALSGANI-ATEVAQ 190 (391)
T ss_dssp TT---CSEEEECSCG-GGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCCEEEEEECSCC-HHHHHT
T ss_pred hc---CCEEEEECCh-hhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhCccceeccCCch-HHHhhc
Confidence 88 9999999998 4899999999999999999999998864222 122222222 2332 3333422 233334
Q ss_pred CCC-ccccCC----------CHHHHHHHHHHHHHHhccC-----------CCCCCceEEeCCchhHHHHHHHHHHHHHHH
Q 011931 143 HGP-SLMPGG----------SFEAYKYIEDILLKVAAQV-----------PDSGPCVTYVSKGGSGNFVKMIHNGIEYGD 200 (474)
Q Consensus 143 ~G~-~i~~gg----------~~~~~~~v~~ll~~lg~~~-----------~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~ 200 (474)
.-| .+.++. ++...+.++.+|..=-.++ ...-|+|+-++. |...-+++-.|+-.+.+
T Consensus 191 ~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAa-Gi~dGlg~G~NakAALi 269 (391)
T 4fgw_A 191 EHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGC-GFVEGLGWGNNASAAIQ 269 (391)
T ss_dssp TCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHH-HHHHHTTCHHHHHHHHH
T ss_pred CCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHH-HHHhcCCCCCCHHHHHH
Confidence 444 333322 2222355666663211110 001122332222 44445567789999999
Q ss_pred HHHHHHHHHHHHHh--CCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCC-CcchHHHHhhhc--CCCccHHHHH
Q 011931 201 MQLIAEAYDVLKSV--GKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKG-DGYLVDKVLDKT--GMKGTGKWTV 275 (474)
Q Consensus 201 ~~~i~Ea~~l~~~~--G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~-~~~~~~~i~~~~--~~k~tg~~~~ 275 (474)
...++|+.+|+... ||-++..+..+ .|.++-.+.-..++..+....+. .+..++.+.+.+ +|+-+|..++
T Consensus 270 trGl~Em~rlg~al~~~g~~~tt~~gl-----aGlGDLi~Tc~sSRNr~~G~~lg~~G~~~~~~~~~~~~g~v~EGv~ta 344 (391)
T 4fgw_A 270 RVGLGEIIRFGQMFFPESREETYYQES-----AGVADLITTCAGGRNVKVARLMATSGKDAWECEKELLNGQSAQGLITC 344 (391)
T ss_dssp HHHHHHHHHHHHHHSTTCCHHHHHHST-----TTHHHHHHHHHSSHHHHHHHHHHHTCCCHHHHHHHHHTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCceeecCC-----CcccceeEEecCCccHHHHHHHHhcCCCHHHHHHHHhCCCEEehHHHH
Confidence 99999999999998 31333333211 12222111100011111000111 234566666665 6888998887
Q ss_pred HH----HHHcCC--CcccHHHH
Q 011931 276 QQ----AADLSV--AAPTIEER 291 (474)
Q Consensus 276 ~~----a~~~gv--~~p~~~~r 291 (474)
+. ++++|+ .+|++++=
T Consensus 345 ~~v~~l~~~~~v~~emPI~~~v 366 (391)
T 4fgw_A 345 KEVHEWLETCGSVEDFPLFEAV 366 (391)
T ss_dssp HHHHHHHHHHTCSTTCHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCHHHHH
Confidence 54 778899 78988553
No 88
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.46 E-value=1e-13 Score=136.98 Aligned_cols=251 Identities=14% Similarity=0.039 Sum_probs=142.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc--------cCCHHHHHhhcCCCcEEE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG--------FRDPESFVNSIQKPRVII 78 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--------~~s~~e~~~~l~~~dvIi 78 (474)
+|||+|||+|.||+.+|..|+ +|++|++|+|++++.+.+.+.+.. +.. .....+... .+|+||
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~-----~~~~~~~~~~~~~~~~~~~~---~~D~vi 72 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIR-----LYKGGEEFRADCSADTSINS---DFDLLV 72 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEE-----EEETTEEEEECCEEESSCCS---CCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCce-----EecCCCeecccccccccccC---CCCEEE
Confidence 579999999999999999999 999999999999888888765421 110 000012223 499999
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC------CCC-Cc-ccccCCCccccC
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG------VSG-GE-EGARHGPSLMPG 150 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p------vsg-g~-~~a~~G~~i~~g 150 (474)
++||+. ++++++..+.+. .++. ||...|+.... +.+.+.+. .-+++.+- ..+ |. .....|. +.+|
T Consensus 73 lavK~~-~~~~~l~~l~~~-~~~~-ivs~~nGi~~~-e~l~~~~~--~~~vl~g~~~~~a~~~~pg~v~~~~~g~-~~iG 145 (307)
T 3ego_A 73 VTVKQH-QLQSVFSSLERI-GKTN-ILFLQNGMGHI-HDLKDWHV--GHSIYVGIVEHGAVRKSDTAVDHTGLGA-IKWS 145 (307)
T ss_dssp ECCCGG-GHHHHHHHTTSS-CCCE-EEECCSSSHHH-HHHHTCCC--SCEEEEEEECCEEEECSSSEEEEEECCC-EEEE
T ss_pred EEeCHH-HHHHHHHHhhcC-CCCe-EEEecCCccHH-HHHHHhCC--CCcEEEEEEeeceEECCCCEEEEeeeee-EEEE
Confidence 999985 789999888764 4555 89999987421 22222211 11222211 111 10 0111122 2222
Q ss_pred ---CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHH---------------------HHHHHHHHHH
Q 011931 151 ---GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGI---------------------EYGDMQLIAE 206 (474)
Q Consensus 151 ---g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~---------------------~~~~~~~i~E 206 (474)
++.+.++.+..+|..-+.+ +.+..+.-...+-|++.|.. ...+..++.|
T Consensus 146 ~~~~~~~~~~~l~~~l~~ag~~-------~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E 218 (307)
T 3ego_A 146 AFDDAEPDRLNILFQHNHSDFP-------IYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQE 218 (307)
T ss_dssp ECTTCCGGGGTTTTSSCCTTSC-------EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHH
T ss_pred eCCCCcHHHHHHHHHhhhCCCC-------cEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHH
Confidence 2222222222222222221 34444566667778777742 3344567888
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhhccCcchhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcc
Q 011931 207 AYDVLKSVGKLTNEELQNVFTEWNKGELLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAP 286 (474)
Q Consensus 207 a~~l~~~~G~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p 286 (474)
+..+++.. +++.+.+-+....... .....++.+++.+.+. ..+|.+.. +.++.|+++|+|+|
T Consensus 219 ~~~va~~~---~~~~~~~~~~~~~~~~-~~~~sSM~qD~~~gr~-----tEid~i~G---------~vv~~a~~~gv~tP 280 (307)
T 3ego_A 219 ACRILKLE---NEEKAWERVQAVCGQT-KENRSSMLVDVIGGRQ-----TEADAIIG---------YLLKEASLQGLDAV 280 (307)
T ss_dssp HHHHHTCS---CHHHHHHHHHHHHHHT-TTCCCHHHHHHHHTCC-----CSHHHHHH---------HHHHHHHHTTCCCH
T ss_pred HHHHHhcc---ChHHHHHHHHHHHHhc-CCCCchHHHHHHcCCc-----ccHHHhhh---------HHHHHHHHcCCCCc
Confidence 88887643 2333333221111111 1223345556554432 46788765 57899999999999
Q ss_pred cHHHHHHHHHhc
Q 011931 287 TIEERVEAAKVF 298 (474)
Q Consensus 287 ~~~~r~~~~~~~ 298 (474)
..+.-+..-+.+
T Consensus 281 ~~~~l~~li~~~ 292 (307)
T 3ego_A 281 HLEFLYGSIKAL 292 (307)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 985544444433
No 89
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.39 E-value=8.5e-15 Score=144.97 Aligned_cols=137 Identities=15% Similarity=0.165 Sum_probs=105.3
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHC-CC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEK-GF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~-G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
...++|+|||+|.||..++.+|++. |+ +|.+|||++++.+++.+.... ++..+.+++++++. +|+|++|+|
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~----~~~~~~~~~e~v~~---aDiVi~atp 205 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG----EVRVCSSVQEAVAG---ADVIITVTL 205 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSS----CCEECSSHHHHHTT---CSEEEECCC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhC----CeEEeCCHHHHHhc---CCEEEEEeC
Confidence 3457899999999999999999876 76 899999999999988875320 14567889999887 999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe----cCC-CCCc---ccccCCC-ccccCCCH
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG----MGV-SGGE---EGARHGP-SLMPGGSF 153 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~----~pv-sgg~---~~a~~G~-~i~~gg~~ 153 (474)
.. +.++.. +.+++|++|+++++..|.. +++.+.+..++..|+| +|+ +|.. .++..|+ ..|++|+.
T Consensus 206 ~~---~~v~~~--~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~~~vD~~~~a~~~~G~~~~~~~~~~g~L~~~v~G~~ 279 (312)
T 2i99_A 206 AT---EPILFG--EWVKPGAHINAVGASRPDW-RELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVK 279 (312)
T ss_dssp CS---SCCBCG--GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSEEEESCHHHHHHHCHHHHTTTCCCCEEHHHHHHTSS
T ss_pred CC---CcccCH--HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCEEEECCHHHHHhhcCCcccChhhccccHHHHhCCCC
Confidence 64 233322 5688999999999888754 5666777778899999 677 4433 4455566 67777765
Q ss_pred H
Q 011931 154 E 154 (474)
Q Consensus 154 ~ 154 (474)
+
T Consensus 280 ~ 280 (312)
T 2i99_A 280 P 280 (312)
T ss_dssp C
T ss_pred C
Confidence 4
No 90
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.33 E-value=3.8e-11 Score=122.94 Aligned_cols=99 Identities=14% Similarity=0.195 Sum_probs=77.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHH-CCCcEEEEe---CChHHHHHHHHhhh------hcCC--C----Ccc-ccCCHHHHHh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAE-KGFPISVYN---RTTSKVDETVERAK------KEGD--L----PLF-GFRDPESFVN 69 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~-~G~~V~v~d---r~~~~~~~l~~~~~------~~~~--~----~~~-~~~s~~e~~~ 69 (474)
||||+|||+|.||..+|..|++ +|++|++|| |++++++.+.+... ..++ . ++. .++++++++.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 4799999999999999999998 599999999 88888877443221 0000 0 122 4567888777
Q ss_pred hcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCC
Q 011931 70 SIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 70 ~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st 109 (474)
. +|+||+|||+. ..+++++++.+.+.++++|++..+
T Consensus 82 ~---aD~Vilav~~~-~~~~v~~~l~~~l~~~~ivv~~~~ 117 (404)
T 3c7a_A 82 G---ADVVILTVPAF-AHEGYFQAMAPYVQDSALIVGLPS 117 (404)
T ss_dssp T---CSEEEECSCGG-GHHHHHHHHTTTCCTTCEEEETTC
T ss_pred C---CCEEEEeCchH-HHHHHHHHHHhhCCCCcEEEEcCC
Confidence 6 99999999986 689999999999999999998543
No 91
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.32 E-value=1.5e-11 Score=134.16 Aligned_cols=192 Identities=15% Similarity=0.220 Sum_probs=133.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-----------hcC----CCCccccCCHHHHHhhc
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-----------KEG----DLPLFGFRDPESFVNSI 71 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-----------~~~----~~~~~~~~s~~e~~~~l 71 (474)
..||||||+|.||..+|..++.+|++|+++|++++.++...+... ... ..++..+++.+++. .
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~- 393 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELS-T- 393 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGG-S-
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHh-h-
Confidence 468999999999999999999999999999999987654432110 000 00345566666543 3
Q ss_pred CCCcEEEEecCCChhHH-HHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHc----CCeEEecC-CCCCcccccCCC
Q 011931 72 QKPRVIIMLVKAGAPVD-ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAEL----GLLYLGMG-VSGGEEGARHGP 145 (474)
Q Consensus 72 ~~~dvIil~vp~~~~v~-~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~----g~~~v~~p-vsgg~~~a~~G~ 145 (474)
||+||.+|+..-+++ +++.++.+.++++.|+...|++.+.+ ++++.+... |.||+..| ++.-.
T Consensus 394 --aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~--~ia~~~~~p~r~ig~HFfnP~~~m~LV------- 462 (742)
T 3zwc_A 394 --VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVD--DIASSTDRPQLVIGTHFFSPAHVMRLL------- 462 (742)
T ss_dssp --CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH--HHHTTSSCGGGEEEEECCSSTTTCCEE-------
T ss_pred --CCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChH--HHHhhcCCccccccccccCCCCCCceE-------
Confidence 999999999998777 45588888899999998877776544 333332211 45555432 11111
Q ss_pred ccccC--CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Q 011931 146 SLMPG--GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQ 223 (474)
Q Consensus 146 ~i~~g--g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~ 223 (474)
-++.| .+++.++.+..+.+.+++.+ +.+. ...|.++ |.+ ....++|++.+... | .+++++.
T Consensus 463 Evi~g~~Ts~e~~~~~~~~~~~lgK~p-------V~vk-d~pGFi~----NRi---~~~~~~ea~~l~~e-G-~~~~~id 525 (742)
T 3zwc_A 463 EVIPSRYSSPTTIATVMSLSKKIGKIG-------VVVG-NCYGFVG----NRM---LAPYYNQGFFLLEE-G-SKPEDVD 525 (742)
T ss_dssp EEEECSSCCHHHHHHHHHHHHHTTCEE-------EECC-CSTTTTH----HHH---HHHHHHHHHHHHHT-T-CCHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHhCCCC-------cccC-CCCCccH----HHH---hhHHHHHHHHHHHc-C-CCHHHHH
Confidence 14444 48999999999999999763 5554 4556654 554 45566999998876 6 8999999
Q ss_pred HHHHh
Q 011931 224 NVFTE 228 (474)
Q Consensus 224 ~~~~~ 228 (474)
+++..
T Consensus 526 ~a~~~ 530 (742)
T 3zwc_A 526 GVLEE 530 (742)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 92
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.32 E-value=1.9e-12 Score=126.25 Aligned_cols=117 Identities=13% Similarity=0.128 Sum_probs=100.0
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|++|...|++|.+|||++++.+. +....+++++++. +|+|++++|....+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------~~~~~~l~ell~~---aDiV~l~~P~t~~t 187 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------------DVISESPADLFRQ---SDFVLIAIPLTDKT 187 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------------SEECSSHHHHHHH---CSEEEECCCCCTTT
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------------ccccCChHHHhhc---cCeEEEEeeccccc
Confidence 58999999999999999999999999999999764321 2345689999998 99999999987677
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~ 139 (474)
+.++ .+.++.+++|.+|||+|++.+.+...+.+.+++.++......|+..++
T Consensus 188 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP 240 (290)
T 3gvx_A 188 RGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEP 240 (290)
T ss_dssp TTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTT
T ss_pred hhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCc
Confidence 7666 667888999999999999999999999999998888777777776654
No 93
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.31 E-value=7.3e-12 Score=124.76 Aligned_cols=112 Identities=15% Similarity=0.165 Sum_probs=92.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||+.+|+.|...|++|++|||++++.+.+.+. ++... +++++++. +|+|++++|....
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-------g~~~~-~l~e~l~~---aDvVi~~vp~~~~ 223 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF-------QAEFV-STPELAAQ---SDFIVVACSLTPA 223 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT-------TCEEC-CHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhc-------CceeC-CHHHHHhh---CCEEEEeCCCChH
Confidence 4689999999999999999999999999999987765544322 23444 88888888 9999999998766
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeE
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~ 129 (474)
++.++ .++.+.++++.++|++|++.+.++..+.+.+++.++..
T Consensus 224 t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~g 267 (330)
T 2gcg_A 224 TEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAA 267 (330)
T ss_dssp TTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSE
T ss_pred HHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccE
Confidence 66666 46777899999999999998888888988888765543
No 94
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.29 E-value=1e-11 Score=124.25 Aligned_cols=122 Identities=15% Similarity=0.081 Sum_probs=99.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
-++|||||+|.||+.+|++|...|++|.+|||++...+.+.+.+ +....+++++++. +|+|++++|....
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~l~ell~~---aDvV~l~~Plt~~ 233 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETG-------AKFVEDLNEMLPK---CDVIVINMPLTEK 233 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHC-------CEECSCHHHHGGG---CSEEEECSCCCTT
T ss_pred CCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCC-------CeEcCCHHHHHhc---CCEEEECCCCCHH
Confidence 35899999999999999999999999999999875555444332 4556789999998 9999999998767
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
.+.++ .+.++.+++|.+|||++.+...+...+.+.|++..+......|+..+
T Consensus 234 t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~E 286 (351)
T 3jtm_A 234 TRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQ 286 (351)
T ss_dssp TTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSS
T ss_pred HHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCC
Confidence 77666 56778899999999999999999999999998876654444444443
No 95
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.29 E-value=1.5e-11 Score=122.60 Aligned_cols=119 Identities=21% Similarity=0.206 Sum_probs=95.8
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||+.+|+.|...|++|++|||++++ +...+.+ +. ..+++++++. +|+|++++|....
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~-~~~l~~~l~~---aDvVil~vp~~~~ 217 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELN-------AE-FKPLEDLLRE---SDFVVLAVPLTRE 217 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHC-------CE-ECCHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcC-------cc-cCCHHHHHhh---CCEEEECCCCChH
Confidence 468999999999999999999999999999999876 4333222 33 3478888888 9999999999876
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg 137 (474)
++.++ .++.+.++++.+||++|++.+.++..+.+.+++..+......|++.
T Consensus 218 t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ 269 (334)
T 2dbq_A 218 TYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEE 269 (334)
T ss_dssp TTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSS
T ss_pred HHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCC
Confidence 76666 4677889999999999999988888888888876665544445543
No 96
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.29 E-value=1.5e-11 Score=123.39 Aligned_cols=122 Identities=16% Similarity=0.150 Sum_probs=97.4
Q ss_pred cCcEEEEcccHhHHHHHHHHH-HCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIA-EKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~-~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
-++|||||+|.||+.+|+.|. ..|++|.+|||++++.+...+.+ +..+.+++++++. +|+|++++|...
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g-------~~~~~~l~ell~~---aDvVil~vp~~~ 232 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALG-------AERVDSLEELARR---SDCVSVSVPYMK 232 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHHHH---CSEEEECCCCSG
T ss_pred CCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcC-------cEEeCCHHHHhcc---CCEEEEeCCCCh
Confidence 357999999999999999999 99999999999987655443322 3445588898888 999999999987
Q ss_pred hHHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 86 PVDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 86 ~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
.++.++ .++++.++++.+|||++++.+.+...+.+.+++..+......+++.+
T Consensus 233 ~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~E 286 (348)
T 2w2k_A 233 LTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFE 286 (348)
T ss_dssp GGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTT
T ss_pred HHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCC
Confidence 677776 46777899999999999999888888988887755444445555543
No 97
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.28 E-value=1.8e-11 Score=122.55 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=97.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
-++|||||+|.||+.+|+++...|++|.+|||++.. +...+.+ +..+.++++++++ +|+|++++|...+
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~~~~~l~ell~~---aDiV~l~~Plt~~ 228 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERARADG-------FAVAESKDALFEQ---SDVLSVHLRLNDE 228 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHHHTT-------CEECSSHHHHHHH---CSEEEECCCCSTT
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHHhcC-------ceEeCCHHHHHhh---CCEEEEeccCcHH
Confidence 358999999999999999999999999999998643 3333322 4556799999998 9999999998766
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg 137 (474)
.+.++ .+.++.+++|.++||++++...+...+.+.|++..+......|...
T Consensus 229 t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~ 280 (352)
T 3gg9_A 229 TRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFET 280 (352)
T ss_dssp TTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSS
T ss_pred HHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCC
Confidence 77666 5677889999999999999999999999999887775544444433
No 98
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.25 E-value=7e-12 Score=124.15 Aligned_cols=120 Identities=16% Similarity=0.151 Sum_probs=97.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|++|...|++|.+|||+++..+.+. ......++++++++ +|+|++++|...++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---------~~~~~~~l~ell~~---aDvV~l~lPlt~~t 205 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFH---------ETVAFTATADALAT---ANFIVNALPLTPTT 205 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCS---------EEEEGGGCHHHHHH---CSEEEECCCCCGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHh---------hccccCCHHHHHhh---CCEEEEcCCCchHH
Confidence 5799999999999999999999999999999976432211 11234578899988 99999999987777
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~ 139 (474)
+.++ .+.+..+++|.++||+|++...+...+.+.|++..+......|+..++
T Consensus 206 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EP 258 (324)
T 3evt_A 206 HHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEP 258 (324)
T ss_dssp TTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSS
T ss_pred HHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCC
Confidence 7766 567788999999999999999999999999988777655555655543
No 99
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.25 E-value=2.6e-11 Score=120.63 Aligned_cols=114 Identities=16% Similarity=0.190 Sum_probs=93.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||+.+|+.|...|++|.+|||++++.. + +..+.++++++++ +|+|++++|....
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g-------~~~~~~l~ell~~---aDvVil~vP~~~~ 228 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----N-------YTYYGSVVELASN---SDILVVACPLTPE 228 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----C-------SEEESCHHHHHHT---CSEEEECSCCCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----C-------ceecCCHHHHHhc---CCEEEEecCCChH
Confidence 35899999999999999999999999999999976431 1 3446789998887 9999999999767
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCC
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVS 135 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvs 135 (474)
++.++ .+.++.++++.+|||++++.+.++..+.+.+++.++......|.
T Consensus 229 t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~ 278 (333)
T 3ba1_A 229 TTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVF 278 (333)
T ss_dssp GTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCC
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecC
Confidence 77777 45677889999999999999999999999998765544333333
No 100
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.23 E-value=4.8e-11 Score=118.99 Aligned_cols=120 Identities=17% Similarity=0.221 Sum_probs=97.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|++|...|++|.+|||++...+... + ...+.++++++++ +|+|++++|...+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g-------~~~~~~l~ell~~---sDvV~l~~Plt~~T 241 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--G-------AIYHDTLDSLLGA---SDIFLIAAPGRPEL 241 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--T-------CEECSSHHHHHHT---CSEEEECSCCCGGG
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--C-------CeEeCCHHHHHhh---CCEEEEecCCCHHH
Confidence 5899999999999999999999999999999875433221 2 3455689999988 99999999987777
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~ 139 (474)
+.++ .+.++.+++|.++||++.+...+...+.+.|++..+......|+..++
T Consensus 242 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP 294 (345)
T 4g2n_A 242 KGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP 294 (345)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC
Confidence 7766 567788999999999999999999999999987665544445554443
No 101
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.22 E-value=2.2e-11 Score=121.26 Aligned_cols=117 Identities=19% Similarity=0.250 Sum_probs=76.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
-++|||||+|.||+.+|+++...|++|.+|||++++. . ......+++++++. +|+|++++|...+
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~-------~~~~~~sl~ell~~---aDvVil~vP~t~~ 235 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG-----V-------DWIAHQSPVDLARD---SDVLAVCVAASAA 235 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT-----S-------CCEECSSHHHHHHT---CSEEEECC-----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc-----c-------CceecCCHHHHHhc---CCEEEEeCCCCHH
Confidence 3689999999999999999999999999999997641 1 13456789999998 9999999998778
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
++.++ .+.++.++++.++||++.+...+...+.+.+++..+......|+..+
T Consensus 236 t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~E 288 (340)
T 4dgs_A 236 TQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNE 288 (340)
T ss_dssp -----CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSS
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCC
Confidence 88888 67788899999999999999999999999888766655444555443
No 102
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.22 E-value=8.2e-11 Score=115.90 Aligned_cols=109 Identities=19% Similarity=0.181 Sum_probs=90.2
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|++|...|++|.+|||++++ +...+.+ +.. .+++++++. +|+|++++|...+.
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~~-~~l~ell~~---aDvV~l~~p~~~~t 210 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVN-------GKF-VDLETLLKE---SDVVTIHVPLVEST 210 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTT-------CEE-CCHHHHHHH---CSEEEECCCCSTTT
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcC-------ccc-cCHHHHHhh---CCEEEEecCCChHH
Confidence 58999999999999999999999999999999876 3333322 333 378899888 99999999987666
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (474)
+.++ .+.++.+++|.++||++++.+.+...+.+.+++..+.
T Consensus 211 ~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 211 YHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 6666 4667789999999999999888888888888876554
No 103
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.22 E-value=6.1e-11 Score=121.21 Aligned_cols=148 Identities=14% Similarity=0.109 Sum_probs=101.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHC------CCcEEEEeCChHH-HHHHHHhhhhcCCCCccc----cCCHHHHHhhcCCCcE
Q 011931 8 TRIGLAGLAVMGQNLALNIAEK------GFPISVYNRTTSK-VDETVERAKKEGDLPLFG----FRDPESFVNSIQKPRV 76 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~------G~~V~v~dr~~~~-~~~l~~~~~~~~~~~~~~----~~s~~e~~~~l~~~dv 76 (474)
++|||||+|.||.++|++|.+. |++|++.+++.++ .+...+.+ +.. +.+++|+++. +|+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G-------~~v~d~ta~s~aEAa~~---ADV 124 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAG-------FTEESGTLGDIWETVSG---SDL 124 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTT-------CCTTTTCEEEHHHHHHH---CSE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCC-------CEEecCCCCCHHHHHhc---CCE
Confidence 6899999999999999999999 9999987776443 33333333 333 3688999998 999
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHH--HHHHcCCeEEe-cCCCCCcc-------c---ccC
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREK--AMAELGLLYLG-MGVSGGEE-------G---ARH 143 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~--~l~~~g~~~v~-~pvsgg~~-------~---a~~ 143 (474)
||++||+. ....++.++.+.+++|++|+.+... ....+.+ .....++.++. +|-..+.. + ...
T Consensus 125 VILaVP~~-~~~eVl~eI~p~LK~GaILs~AaGf---~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~ 200 (525)
T 3fr7_A 125 VLLLISDA-AQADNYEKIFSHMKPNSILGLSHGF---LLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGA 200 (525)
T ss_dssp EEECSCHH-HHHHHHHHHHHHSCTTCEEEESSSH---HHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTC
T ss_pred EEECCChH-HHHHHHHHHHHhcCCCCeEEEeCCC---CHHHHhhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccC
Confidence 99999986 4567888999999999997665553 2212221 01123555554 56544432 1 014
Q ss_pred CC-ccc-cCC--CHHHHHHHHHHHHHHhcc
Q 011931 144 GP-SLM-PGG--SFEAYKYIEDILLKVAAQ 169 (474)
Q Consensus 144 G~-~i~-~gg--~~~~~~~v~~ll~~lg~~ 169 (474)
|. +++ +.. +.++.+.+..++..+|..
T Consensus 201 Gv~~liAv~qd~tgea~e~alala~aiG~~ 230 (525)
T 3fr7_A 201 GINSSFAVHQDVDGRATDVALGWSVALGSP 230 (525)
T ss_dssp SCCEEEEEEECSSSCHHHHHHHHHHHTTCS
T ss_pred CccEEEEcCCCCCHHHHHHHHHHHHHCCCC
Confidence 55 233 333 457889999999999973
No 104
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.22 E-value=2.5e-11 Score=121.43 Aligned_cols=113 Identities=15% Similarity=0.157 Sum_probs=93.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
-++|||||+|.||+.+|++|...|++|.+||+++++.. ....+ +..+.+++++++. +|+|++++|...+
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~g-------~~~~~~l~ell~~---aDvV~l~~P~t~~ 236 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERALG-------LQRVSTLQDLLFH---SDCVTLHCGLNEH 236 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHHT-------CEECSSHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-HhhcC-------CeecCCHHHHHhc---CCEEEEcCCCCHH
Confidence 36899999999999999999999999999999865421 12212 3445689999988 9999999998767
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v 130 (474)
++.++ .+.++.+++|.++||++++.+.+...+.+.+++.++...
T Consensus 237 t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA 281 (347)
T 1mx3_A 237 NHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGA 281 (347)
T ss_dssp CTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEE
T ss_pred HHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEE
Confidence 77777 667788999999999999999999999999988766543
No 105
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.20 E-value=1.9e-11 Score=121.46 Aligned_cols=121 Identities=13% Similarity=0.090 Sum_probs=98.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
-++|||||+|.||+.+|++|...|++|.+|||++.+.+...+.+ +. ..+++++++. +|+|++++|....
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g-------~~-~~~l~ell~~---aDvV~l~~P~t~~ 213 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLG-------LR-QVACSELFAS---SDFILLALPLNAD 213 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHT-------EE-ECCHHHHHHH---CSEEEECCCCSTT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcC-------ce-eCCHHHHHhh---CCEEEEcCCCCHH
Confidence 36899999999999999999999999999999974444433332 33 3489999988 9999999998766
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
...++ .+.++.+++|.+|||++++.+.+...+.+.+++.++......|+..+
T Consensus 214 t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E 266 (330)
T 4e5n_A 214 TLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEME 266 (330)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGG
T ss_pred HHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccc
Confidence 66666 57788899999999999999999999999998877765555555443
No 106
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.20 E-value=3.9e-11 Score=118.92 Aligned_cols=111 Identities=13% Similarity=0.134 Sum_probs=90.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeC-ChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNR-TTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
-++|||||+|.||+.+|++|...|++|.+||+ ++++. ...+.+ +....+++++++. +|+|++++|...
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g-------~~~~~~l~ell~~---aDvVil~~p~~~ 214 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQ-------ATFHDSLDSLLSV---SQFFSLNAPSTP 214 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHT-------CEECSSHHHHHHH---CSEEEECCCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcC-------cEEcCCHHHHHhh---CCEEEEeccCch
Confidence 35799999999999999999999999999999 87653 222222 3445589999988 999999999876
Q ss_pred hHHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011931 86 PVDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 86 ~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (474)
+++.++ ...++.+++|.++||++++.+.+...+.+.+++.++.
T Consensus 215 ~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 215 ETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp TTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 677666 4577889999999999999888888888888776544
No 107
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.20 E-value=6.9e-11 Score=119.74 Aligned_cols=120 Identities=12% Similarity=0.059 Sum_probs=95.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
-++|||||+|.||+.+|++|...|++|.+|||++.+.+...+.+ +..+.+++++++. +|+|++++|...+
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G-------~~~~~~l~ell~~---aDvV~l~~Plt~~ 260 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN-------LTWHATREDMYPV---CDVVTLNCPLHPE 260 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHGGG---CSEEEECSCCCTT
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcC-------ceecCCHHHHHhc---CCEEEEecCCchH
Confidence 35899999999999999999999999999999875544333322 3444688999888 9999999998767
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsg 136 (474)
++.++ .+.++.+++|.++||++++...+...+.+.+++..+.....-|+.
T Consensus 261 t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~ 311 (393)
T 2nac_A 261 TEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWF 311 (393)
T ss_dssp TTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCS
T ss_pred HHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecC
Confidence 77777 567788999999999999988888889988876554433333433
No 108
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.20 E-value=3.5e-11 Score=119.86 Aligned_cols=118 Identities=13% Similarity=0.162 Sum_probs=93.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||+.+|+.|...|++|++|||++++ +...+.+ +.. .+++++++. +|+|++++|....
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g-------~~~-~~l~e~l~~---aDiVil~vp~~~~ 213 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELK-------ARY-MDIDELLEK---SDIVILALPLTRD 213 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHT-------EEE-CCHHHHHHH---CSEEEECCCCCTT
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcC-------cee-cCHHHHHhh---CCEEEEcCCCChH
Confidence 468999999999999999999999999999999876 3333222 333 378888888 9999999999867
Q ss_pred HHHHHH-HHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011931 87 VDETIK-TLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (474)
Q Consensus 87 v~~vl~-~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg 137 (474)
++.++. ++.+.++++ ++||+|++.+.+...+.+.+++..+......+++.
T Consensus 214 t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 264 (333)
T 2d0i_A 214 TYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEK 264 (333)
T ss_dssp TTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSS
T ss_pred HHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCC
Confidence 777763 567788999 99999999988888888888765554444455543
No 109
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.19 E-value=6.6e-12 Score=124.20 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=94.7
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|++|...|++|++|||+++..+.+. ......+++++++. +|+|++++|...++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---------~~~~~~~l~ell~~---aDvV~l~lPlt~~T 208 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD---------QVYQLPALNKMLAQ---ADVIVSVLPATRET 208 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS---------EEECGGGHHHHHHT---CSEEEECCCCCSSS
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh---------cccccCCHHHHHhh---CCEEEEeCCCCHHH
Confidence 5899999999999999999999999999999874322110 12235688999888 99999999987666
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
+.++ .+.+..+++|.++||++.+.+.+...+.+.+++..+......|+..+
T Consensus 209 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~E 260 (324)
T 3hg7_A 209 HHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQE 260 (324)
T ss_dssp TTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSS
T ss_pred HHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCC
Confidence 6666 45677899999999999999999999999998776654444454443
No 110
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.19 E-value=4.4e-11 Score=119.21 Aligned_cols=117 Identities=17% Similarity=0.229 Sum_probs=93.9
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|+++...|++|.+|||+++.. .+. .. ...+++++++. +|+|++++|.....
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~-------~~-~~~~l~ell~~---aDvV~l~~Plt~~t 214 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE---FEP-------FL-TYTDFDTVLKE---ADIVSLHTPLFPST 214 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG---GTT-------TC-EECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh---hhc-------cc-cccCHHHHHhc---CCEEEEcCCCCHHH
Confidence 579999999999999999999999999999997641 111 12 23489999998 99999999987666
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
+.++ .+.++.+++|.++||++.+...+...+.+.|++..+......|+..+
T Consensus 215 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~E 266 (343)
T 2yq5_A 215 ENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGE 266 (343)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTG
T ss_pred HHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccC
Confidence 6666 56778899999999999999999999999998876644444444443
No 111
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.19 E-value=2.5e-12 Score=121.98 Aligned_cols=159 Identities=14% Similarity=0.143 Sum_probs=108.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
|||||||+|.||..++.+|.+.|++| .+||+++ +.+ ..+++++++++ ..+|+|++|+|+. .
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~--------------~~~~~~~~l~~--~~~DvVv~~~~~~-~ 62 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHE--------------KMVRGIDEFLQ--REMDVAVEAASQQ-A 62 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCT--------------TEESSHHHHTT--SCCSEEEECSCHH-H
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chh--------------hhcCCHHHHhc--CCCCEEEECCCHH-H
Confidence 58999999999999999999999997 6999985 221 13568888873 2399999999986 3
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhH---HHHHHHHHHcCCe-EEecCCCCCcccccCCCccccCCCHHHHHHHHHH
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENT---ERREKAMAELGLL-YLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDI 162 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~---~~~~~~l~~~g~~-~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~l 162 (474)
..+++ ...++.|..|++.++..+... +++.+..+++|.. +++.|++|+...+..+.. +++...+...++.
T Consensus 63 ~~~~~---~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 63 VKDYA---EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSASE---LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHH---HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHHTGG---GEEEEEEEEEEEG
T ss_pred HHHHH---HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHHhhc---cccEEEEEEEcCh
Confidence 33333 344668999999988764433 5666777777876 789999998766554432 4333333333333
Q ss_pred HHHHhccCCCCCCceEEeCCchhH-HHHHHHHHHHH
Q 011931 163 LLKVAAQVPDSGPCVTYVSKGGSG-NFVKMIHNGIE 197 (474)
Q Consensus 163 l~~lg~~~~~~~~~~~~~g~~g~g-~~~K~v~N~~~ 197 (474)
++..+ +.+++.|+.+.+ ..+|...|.+.
T Consensus 137 ~~~~~-------~~~~~~G~~~~~~~~~~~~~n~~~ 165 (236)
T 2dc1_A 137 RQFGR-------KGVIFEGSASEAAQKFPKNLNVAA 165 (236)
T ss_dssp GGTTS-------CEEEEEEEHHHHHHHSTTCCHHHH
T ss_pred HHcCc-------ceEEEeccHHHHHHHCCchHHHHH
Confidence 33222 446888875433 45666666654
No 112
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.18 E-value=3.7e-11 Score=118.67 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=93.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||+.+|++|...|++|.+|||++++. ...+.+ +.. .+++++++. +|+|++++|...+
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g-------~~~-~~l~ell~~---aDvVvl~~P~~~~ 209 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKIN-------AKA-VSLEELLKN---SDVISLHVTVSKD 209 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTT-------CEE-CCHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcC-------cee-cCHHHHHhh---CCEEEEeccCChH
Confidence 3589999999999999999999999999999998764 222222 333 488899888 9999999998766
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg 137 (474)
++.++ ++.++.+++|.++||++++.+.+...+.+.+++.++.-...-|...
T Consensus 210 t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~ 261 (313)
T 2ekl_A 210 AKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWN 261 (313)
T ss_dssp SCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSS
T ss_pred HHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCC
Confidence 66666 5567789999999999999988888888888776553333334433
No 113
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.18 E-value=1.6e-10 Score=115.94 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=93.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|+++...|++|.+||+++.. +...+.+ +. ..+++++++. +|+|++++|...+.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g-------~~-~~~l~ell~~---aDvV~l~~Plt~~T 244 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLEENG-------VE-PASLEDVLTK---SDFIFVVAAVTSEN 244 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHHHTT-------CE-ECCHHHHHHS---CSEEEECSCSSCC-
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHhhcC-------ee-eCCHHHHHhc---CCEEEEcCcCCHHH
Confidence 57999999999999999999999999999998633 3333322 33 4589999998 99999999988788
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg 137 (474)
+.++ .+.++.+++|.++||++.+...+...+.+.+++..+. ....|...
T Consensus 245 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~ 294 (365)
T 4hy3_A 245 KRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPE 294 (365)
T ss_dssp --CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSS
T ss_pred HhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCC
Confidence 8777 6778889999999999999999999999999876665 34445443
No 114
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.18 E-value=4.4e-11 Score=119.04 Aligned_cols=119 Identities=18% Similarity=0.235 Sum_probs=96.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|++|...|++|.+|||+++.... +.+ +. ..+++++++. +|+|++++|.....
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g-------~~-~~~l~ell~~---aDvV~l~~P~t~~t 208 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK--EKG-------CV-YTSLDELLKE---SDVISLHVPYTKET 208 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTT-------CE-ECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH--hcC-------ce-ecCHHHHHhh---CCEEEEeCCCChHH
Confidence 58999999999999999999999999999999865432 222 33 3459999988 99999999987666
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~ 139 (474)
+.++ .+.++.+++|.++||++++.+.+...+.+.|++..+......|+..++
T Consensus 209 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP 261 (334)
T 2pi1_A 209 HHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEE 261 (334)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHH
T ss_pred HHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCC
Confidence 6666 567788999999999999999999999999987766554555655443
No 115
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.18 E-value=6.7e-11 Score=117.71 Aligned_cols=109 Identities=13% Similarity=0.076 Sum_probs=90.8
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|++|...|++|.+||+++++. ...+.+ +. ..+++++++. +|+|++++|...++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g-------~~-~~~l~ell~~---aDvV~l~~P~t~~t 233 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSASFG-------VQ-QLPLEEIWPL---CDFITVHTPLLPST 233 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHHHTT-------CE-ECCHHHHGGG---CSEEEECCCCCTTT
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhhhcC-------ce-eCCHHHHHhc---CCEEEEecCCCHHH
Confidence 579999999999999999999999999999987652 222222 33 2488898888 99999999998777
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (474)
+.++ .+.++.+++|.++||++++.+.+...+.+.+++..+.
T Consensus 234 ~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 234 TGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp TTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred HHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCcc
Confidence 7777 5678889999999999999988988899888876554
No 116
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.18 E-value=1.1e-10 Score=123.43 Aligned_cols=151 Identities=17% Similarity=0.164 Sum_probs=109.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||+++|++|...|++|++||+++.. +...+.+ +..+ +++++++. ||+|++++|....
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g-------~~~~-~l~e~~~~---aDvV~l~~P~~~~ 209 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLG-------IELL-SLDDLLAR---ADFISVHLPKTPE 209 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHT-------CEEC-CHHHHHHH---CSEEEECCCCSTT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcC-------cEEc-CHHHHHhc---CCEEEECCCCchH
Confidence 368999999999999999999999999999998743 3333322 3333 78899988 9999999999867
Q ss_pred HHHHHHH-HHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCccc----ccCCC-ccc---cC-CCHHHH
Q 011931 87 VDETIKT-LSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEG----ARHGP-SLM---PG-GSFEAY 156 (474)
Q Consensus 87 v~~vl~~-l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~----a~~G~-~i~---~g-g~~~~~ 156 (474)
+..++.+ +++.+++|.+|||++++.+.+...+.+.+.+..+......+.++++. ....+ .++ .+ .+.++.
T Consensus 210 t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~ 289 (529)
T 1ygy_A 210 TAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQ 289 (529)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHH
T ss_pred HHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHH
Confidence 7777754 77889999999999999998888888888765444333334444332 22334 332 24 367766
Q ss_pred HH-----HHHHHHHHhcc
Q 011931 157 KY-----IEDILLKVAAQ 169 (474)
Q Consensus 157 ~~-----v~~ll~~lg~~ 169 (474)
++ ++.+.+.++..
T Consensus 290 ~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 290 DRAGTDVAESVRLALAGE 307 (529)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 65 56666666653
No 117
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.17 E-value=9.9e-12 Score=122.67 Aligned_cols=120 Identities=20% Similarity=0.261 Sum_probs=95.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
-++|||||+|.||+.+|++|...|++|.+|||+++..+.+. ......+++++++. +|+|++++|...+
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---------~~~~~~~l~ell~~---aDiV~l~~Plt~~ 206 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVE---------SYVGREELRAFLNQ---TRVLINLLPNTAQ 206 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCE---------EEESHHHHHHHHHT---CSEEEECCCCCGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhh---------hhcccCCHHHHHhh---CCEEEEecCCchh
Confidence 36899999999999999999999999999999976432110 01123578888887 9999999998877
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
.+.++ .+.++.+++|.++||++.+...+...+.+.|++..+......|...+
T Consensus 207 t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~E 259 (315)
T 3pp8_A 207 TVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQE 259 (315)
T ss_dssp GTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSS
T ss_pred hhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCC
Confidence 77777 67788899999999999999999999999998776654444455443
No 118
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.16 E-value=5.7e-11 Score=119.64 Aligned_cols=119 Identities=15% Similarity=0.094 Sum_probs=96.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCc-EEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFP-ISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
-++|||||+|.||+.+|++|...|++ |.+|||++.+.+...+.+ +....+++++++. +|+|++++|...
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g-------~~~~~~l~ell~~---aDvV~l~~P~t~ 233 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVG-------ARRVENIEELVAQ---ADIVTVNAPLHA 233 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTT-------EEECSSHHHHHHT---CSEEEECCCCST
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcC-------cEecCCHHHHHhc---CCEEEECCCCCh
Confidence 35899999999999999999999997 999999876555443322 3445689999887 999999999987
Q ss_pred hHHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCC
Q 011931 86 PVDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVS 135 (474)
Q Consensus 86 ~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvs 135 (474)
..+.++ .+.++.+++|.+|||++++...+...+.+.+++.++.-...-|+
T Consensus 234 ~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf 284 (364)
T 2j6i_A 234 GTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVW 284 (364)
T ss_dssp TTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred HHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecC
Confidence 777777 56778899999999999999889999999998776543333343
No 119
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.12 E-value=5.7e-11 Score=116.70 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=92.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||+.+|++|...|++|.+|||+++ +. + .....+++++++. +|+|++++|....
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~----~-------~~~~~~l~ell~~---aDvV~l~~P~~~~ 187 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG----P-------WRFTNSLEEALRE---ARAAVCALPLNKH 187 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS----S-------SCCBSCSHHHHTT---CSEEEECCCCSTT
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc----C-------cccCCCHHHHHhh---CCEEEEeCcCchH
Confidence 36899999999999999999999999999999876 11 1 2345688898887 9999999999877
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCC
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVS 135 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvs 135 (474)
++.++ .+.++.+++|.++||+|++.+.+...+.+.+++..+......|+
T Consensus 188 t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~ 237 (303)
T 1qp8_A 188 TRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVW 237 (303)
T ss_dssp TTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCC
T ss_pred HHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccC
Confidence 77777 46788899999999999998888888988888765544333343
No 120
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.10 E-value=9.7e-11 Score=117.78 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=95.8
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh-
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP- 86 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~- 86 (474)
++|||||+|.||+.+|++|...|++|.+||++++... . .....+++++++. ||+|++++|...+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-----~-------~~~~~sl~ell~~---aDiV~l~~Plt~~g 184 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG-----D-------EGDFRTLDELVQE---ADVLTFHTPLYKDG 184 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT-----C-------CSCBCCHHHHHHH---CSEEEECCCCCCSS
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc-----c-------CcccCCHHHHHhh---CCEEEEcCcCCccc
Confidence 5799999999999999999999999999998543211 1 1245689999998 9999999997766
Q ss_pred ---HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCcc
Q 011931 87 ---VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEE 139 (474)
Q Consensus 87 ---v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~ 139 (474)
...++ .+.+..+++|.++||+|.+.+.+...+.+.+++.++......|+..++
T Consensus 185 ~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP 241 (381)
T 3oet_A 185 PYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEP 241 (381)
T ss_dssp TTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTT
T ss_pred cccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCC
Confidence 56566 567778999999999999999999999999988777766666665543
No 121
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.10 E-value=2.3e-10 Score=114.00 Aligned_cols=117 Identities=15% Similarity=0.150 Sum_probs=94.6
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|+++...|++|.+||+++++. + +.. +....+++++++. +|+|++++|...+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-------~~~~~~l~ell~~---aDvV~l~~p~~~~t 213 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EKK-------GYYVDSLDDLYKQ---ADVISLHVPDVPAN 213 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HHT-------TCBCSCHHHHHHH---CSEEEECSCCCGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hhh-------CeecCCHHHHHhh---CCEEEEcCCCcHHH
Confidence 579999999999999999999999999999998754 2 222 2334588999988 99999999988777
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg 137 (474)
+.++ ...++.+++|.++|+++++.+.+...+.+.+++.++.....-|+-.
T Consensus 214 ~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~ 264 (333)
T 1j4a_A 214 VHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEG 264 (333)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTT
T ss_pred HHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCC
Confidence 7666 4567789999999999999999999999999887665444444443
No 122
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.10 E-value=2.1e-10 Score=113.10 Aligned_cols=104 Identities=17% Similarity=0.221 Sum_probs=87.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||+.+|++|...|++|.+|||++++.. . ...+++++++. +|+|++++|....
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----~---------~~~~l~ell~~---aDvV~l~~p~~~~ 206 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-----Y---------PFLSLEELLKE---ADVVSLHTPLTPE 206 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----S---------CBCCHHHHHHH---CSEEEECCCCCTT
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-----c---------ccCCHHHHHhh---CCEEEEeCCCChH
Confidence 35799999999999999999999999999999976532 1 13578899888 9999999999866
Q ss_pred HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011931 87 VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 87 v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (474)
...++ .+.++.+++|.++||++++.+.+...+.+.++ ..+.
T Consensus 207 t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ 248 (311)
T 2cuk_A 207 THRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLF 248 (311)
T ss_dssp TTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSS
T ss_pred HHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCC
Confidence 77666 35677899999999999998888888888887 5553
No 123
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.10 E-value=1e-10 Score=118.87 Aligned_cols=117 Identities=15% Similarity=0.195 Sum_probs=91.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|+++...|++|.+||+++... .. ......+++++++. ||+|++++|...+.
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~-----~~------~~~~~~sl~ell~~---aDvV~lhvPlt~~T 222 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ-----YG------NVKPAASLDELLKT---SDVVSLHVPSSKST 222 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC-----BT------TBEECSSHHHHHHH---CSEEEECCCC----
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc-----cc------CcEecCCHHHHHhh---CCEEEEeCCCCHHH
Confidence 579999999999999999999999999999975321 00 13456789999998 99999999988777
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
+.++ .+.+..+++|.++||+|.+.+.+...+.+.+++..+......|+..+
T Consensus 223 ~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~E 274 (416)
T 3k5p_A 223 SKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVE 274 (416)
T ss_dssp -CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSC
T ss_pred hhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCC
Confidence 7766 56778899999999999999999999999998765554444454443
No 124
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.05 E-value=1.9e-10 Score=117.31 Aligned_cols=106 Identities=14% Similarity=0.223 Sum_probs=89.9
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|+++...|++|.+|||++... .+ ++....+++++++. ||+|++++|...++
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-----~~------~~~~~~~l~ell~~---aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP-----LG------NATQVQHLSDLLNM---SDVVSLHVPENPST 211 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC-----CT------TCEECSCHHHHHHH---CSEEEECCCSSTTT
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc-----cC------CceecCCHHHHHhc---CCEEEEccCCChHH
Confidence 579999999999999999999999999999986431 11 13456689999998 99999999998777
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCC
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGL 127 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~ 127 (474)
+.++ .+.++.+++|.++||+|++.+.+...+.+.+++..+
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i 252 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHL 252 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSE
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCc
Confidence 7777 567788999999999999999999999998876544
No 125
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.03 E-value=3.4e-10 Score=114.07 Aligned_cols=116 Identities=14% Similarity=0.167 Sum_probs=92.8
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|||||+|.||+.+|++|...|++|.+||++++.. ..+ . ...+++++++. ||+|++++|...+
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g-------~-~~~~l~ell~~---aDvV~l~~Plt~~ 180 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPD-------G-EFVSLERLLAE---ADVISLHTPLNRD 180 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STT-------S-CCCCHHHHHHH---CSEEEECCCCCSS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccC-------c-ccCCHHHHHHh---CCEEEEeccCccc
Confidence 3589999999999999999999999999999876432 111 1 24689999988 9999999998765
Q ss_pred ----HHHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011931 87 ----VDETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (474)
Q Consensus 87 ----v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg 137 (474)
...++ .+.++.+++|.++||+|++.+.+...+.+.+++.++.....-|...
T Consensus 181 g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~ 236 (380)
T 2o4c_A 181 GEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEG 236 (380)
T ss_dssp SSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTT
T ss_pred cccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeecc
Confidence 66666 5677889999999999999988999999999876655444444443
No 126
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.00 E-value=3.7e-10 Score=112.41 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=93.7
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|+++...|++|++|||++++. + +.. +. ..+++++++. +|+|++++|...+.
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-------~~-~~~l~ell~~---aDvV~~~~P~~~~t 211 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPD-------FD-YVSLEDLFKQ---SDVIDLHVPGIEQN 211 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTT-------CE-ECCHHHHHHH---CSEEEECCCCCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhc-------cc-cCCHHHHHhc---CCEEEEcCCCchhH
Confidence 579999999999999999999999999999987643 1 111 12 3488999988 99999999998777
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCC
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGG 137 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg 137 (474)
+.++ .+.++.+++|.++|++|++.+.+...+.+.+++.++.-...-|.-.
T Consensus 212 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~ 262 (333)
T 1dxy_A 212 THIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEY 262 (333)
T ss_dssp TTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCC
Confidence 7766 5677889999999999999999999999999876554444445443
No 127
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.99 E-value=3.6e-10 Score=112.44 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=94.0
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.||+.+|++|...|++|++|||++++. + +.. + ...+++++++. +|+|++++|.....
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-------~-~~~~l~ell~~---aDvV~~~~p~t~~t 212 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDY-------C-TQVSLDEVLEK---SDIITIHAPYIKEN 212 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTT-------C-EECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhc-------c-ccCCHHHHHhh---CCEEEEecCCchHH
Confidence 579999999999999999999999999999987643 1 111 1 23488899888 99999999987666
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
+.++ .+.++.+++|.++||+|++.+.+...+.+.+++.++.....-|.-.+
T Consensus 213 ~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~E 264 (331)
T 1xdw_A 213 GAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGE 264 (331)
T ss_dssp CCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTG
T ss_pred HHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCC
Confidence 6666 56778899999999999999999999999998876654444454443
No 128
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.97 E-value=7.4e-10 Score=95.97 Aligned_cols=105 Identities=19% Similarity=0.236 Sum_probs=83.5
Q ss_pred cCcEEEEcc----cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
..+|+|||+ |.||..++++|.+.||+|+.+|++.+.+ . +...+.|++|+.+. +|++++++|
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~-------G~~~~~s~~el~~~---vDlvii~vp 78 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----E-------GLKCYRSVRELPKD---VDVIVFVVP 78 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----T-------TEECBSSGGGSCTT---CCEEEECSC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----C-------CeeecCCHHHhCCC---CCEEEEEeC
Confidence 357999999 9999999999999999876666654222 1 36778899998877 999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM 132 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~ 132 (474)
+ +.+.++++++.+ ...+.++++.++. .+++.+.+++.|+++++.
T Consensus 79 ~-~~v~~v~~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~~Gi~~igp 122 (138)
T 1y81_A 79 P-KVGLQVAKEAVE-AGFKKLWFQPGAE----SEEIRRFLEKAGVEYSFG 122 (138)
T ss_dssp H-HHHHHHHHHHHH-TTCCEEEECTTSC----CHHHHHHHHHHTCEEECS
T ss_pred H-HHHHHHHHHHHH-cCCCEEEEcCccH----HHHHHHHHHHCCCEEEcC
Confidence 6 688888888776 4556788888774 456777778889999973
No 129
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.96 E-value=1.3e-09 Score=104.85 Aligned_cols=108 Identities=18% Similarity=0.161 Sum_probs=82.7
Q ss_pred cEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh--
Q 011931 9 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP-- 86 (474)
Q Consensus 9 ~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~-- 86 (474)
+|+|||+|.||.+++..|.+.|++|++|||++++.+++.+... .. ..+++++ .. +|+||+|+|.+..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~------~~-~~~~~~~-~~---~Divi~~tp~~~~~~ 186 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG------LR-AVPLEKA-RE---ARLLVNATRVGLEDP 186 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT------CE-ECCGGGG-GG---CSEEEECSSTTTTCT
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cc-hhhHhhc-cC---CCEEEEccCCCCCCC
Confidence 7999999999999999999999999999999998888876542 22 4567777 66 9999999998731
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
+..++. .+.+++|.+|+|++.. |..+ ++.+.++++|+.+++
T Consensus 187 ~~~~l~--~~~l~~g~~viD~~~~-p~~t-~l~~~a~~~g~~~v~ 227 (263)
T 2d5c_A 187 SASPLP--AELFPEEGAAVDLVYR-PLWT-RFLREAKAKGLKVQT 227 (263)
T ss_dssp TCCSSC--GGGSCSSSEEEESCCS-SSSC-HHHHHHHHTTCEEEC
T ss_pred CCCCCC--HHHcCCCCEEEEeecC-Cccc-HHHHHHHHCcCEEEC
Confidence 112221 3567889999999987 4444 466667777877664
No 130
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.95 E-value=1e-08 Score=88.00 Aligned_cols=118 Identities=15% Similarity=0.142 Sum_probs=78.5
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHh-hcCCCcEEEEecCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVN-SIQKPRVIIMLVKA 83 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~-~l~~~dvIil~vp~ 83 (474)
..|+|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+.+..... -+.. ..+.+.+.+ .++++|+||+++|+
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~---~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL---VINGDCTKIKTLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE---EEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcE---EEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence 457999999999999999999999999999999999888776531100 0111 123333321 24569999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
+ .....+..+.+.+.++.+|+..++.. . .+.++..|+.++-.|
T Consensus 80 ~-~~~~~~~~~~~~~~~~~ii~~~~~~~--~----~~~l~~~g~~~v~~p 122 (140)
T 1lss_A 80 E-EVNLMSSLLAKSYGINKTIARISEIE--Y----KDVFERLGVDVVVSP 122 (140)
T ss_dssp H-HHHHHHHHHHHHTTCCCEEEECSSTT--H----HHHHHHTTCSEEECH
T ss_pred c-hHHHHHHHHHHHcCCCEEEEEecCHh--H----HHHHHHcCCCEEECH
Confidence 5 44444555566677778877655432 2 234556787766655
No 131
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.93 E-value=1.7e-09 Score=106.25 Aligned_cols=139 Identities=17% Similarity=0.152 Sum_probs=94.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
-++|+|||+|.||+.+|+.|...|++|++|||++++.+.+.+.+. ......+++++++. +|+|++++|...
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~-----~~~~~~~l~~~l~~---aDvVi~~~p~~~- 227 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGL-----VPFHTDELKEHVKD---IDICINTIPSMI- 227 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC-----EEEEGGGHHHHSTT---CSEEEECCSSCC-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC-----eEEchhhHHHHhhC---CCEEEECCChhh-
Confidence 358999999999999999999999999999999987766554321 11112466777666 999999999852
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC-CCCCcccccCCCccccCCCHHHHHHHHHHHHH
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG-VSGGEEGARHGPSLMPGGSFEAYKYIEDILLK 165 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p-vsgg~~~a~~G~~i~~gg~~~~~~~v~~ll~~ 165 (474)
+. +.....++++.++||++....... + +.....|+.++++| +.+....+..+ ....+.+.+++..
T Consensus 228 i~---~~~~~~mk~g~~lin~a~g~~~~~--~-~~a~~~G~~~i~~pg~~g~v~~a~a~--------~l~~~~~~~~l~~ 293 (300)
T 2rir_A 228 LN---QTVLSSMTPKTLILDLASRPGGTD--F-KYAEKQGIKALLAPGLPGIVAPKTAG--------QILANVLSKLLAE 293 (300)
T ss_dssp BC---HHHHTTSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECCCHHHHHCHHHHH--------HHHHHHHHHHHHH
T ss_pred hC---HHHHHhCCCCCEEEEEeCCCCCcC--H-HHHHHCCCEEEECCCCCCcHHHHHHH--------HHHHHHHHHHHHH
Confidence 21 234567889999999998644332 2 34456789988887 44433222221 1223556666666
Q ss_pred Hhc
Q 011931 166 VAA 168 (474)
Q Consensus 166 lg~ 168 (474)
++.
T Consensus 294 ~~~ 296 (300)
T 2rir_A 294 IQA 296 (300)
T ss_dssp HHH
T ss_pred hcc
Confidence 653
No 132
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.92 E-value=9.3e-10 Score=106.71 Aligned_cols=110 Identities=20% Similarity=0.229 Sum_probs=81.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|+|||+|.||.+++..|.+.|++|++|||++++.+++.+.. ++...++++++++. +|+||.|+|.+..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~------g~~~~~~~~~~~~~---aDiVi~atp~~~~ 199 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF------PLEVVNSPEEVIDK---VQVIVNTTSVGLK 199 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS------CEEECSCGGGTGGG---CSEEEECSSTTSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc------CCeeehhHHhhhcC---CCEEEEeCCCCCC
Confidence 36899999999999999999999999999999999888776432 23445577777776 9999999998742
Q ss_pred --HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 87 --VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 87 --v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
+...+. .+.++++.+|+|+++ .. + .+.+..+++|+.+++
T Consensus 200 ~~~~~~i~--~~~l~~g~~viDv~~-~~--t-~ll~~a~~~g~~~v~ 240 (275)
T 2hk9_A 200 DEDPEIFN--YDLIKKDHVVVDIIY-KE--T-KLLKKAKEKGAKLLD 240 (275)
T ss_dssp TTCCCSSC--GGGCCTTSEEEESSS-SC--C-HHHHHHHHTTCEEEC
T ss_pred CCCCCCCC--HHHcCCCCEEEEcCC-Ch--H-HHHHHHHHCcCEEEC
Confidence 111221 345788999999998 32 2 244455567777664
No 133
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.88 E-value=1.7e-09 Score=94.58 Aligned_cols=103 Identities=11% Similarity=0.088 Sum_probs=81.7
Q ss_pred CcEEEEcc----cHhHHHHHHHHHHCCCcEEEEeCCh--HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011931 8 TRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTT--SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 8 ~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~--~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~v 81 (474)
.+|+|||+ |.||..++++|.+.||+|+.+|++. +.+ . ++..+.|++|+.+. +|++++++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~-------G~~~~~sl~el~~~---~Dlvii~v 78 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----L-------GQQGYATLADVPEK---VDMVDVFR 78 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----T-------TEECCSSTTTCSSC---CSEEECCS
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----C-------CeeccCCHHHcCCC---CCEEEEEe
Confidence 47999999 8999999999999999977777664 221 1 35677888888776 99999999
Q ss_pred CCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 82 KAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
|+ ..+.++++++.+ ...+.++++.++. .+++.+.+++.|+++++
T Consensus 79 p~-~~v~~v~~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 79 NS-EAAWGVAQEAIA-IGAKTLWLQLGVI----NEQAAVLAREAGLSVVM 122 (145)
T ss_dssp CS-THHHHHHHHHHH-HTCCEEECCTTCC----CHHHHHHHHTTTCEEEC
T ss_pred CH-HHHHHHHHHHHH-cCCCEEEEcCChH----HHHHHHHHHHcCCEEEc
Confidence 97 588889888776 4556788887654 45677778888999985
No 134
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.80 E-value=3.8e-09 Score=91.91 Aligned_cols=92 Identities=21% Similarity=0.312 Sum_probs=73.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|+|||+|.||..++..|.+.|++|++|||++++.+++.+.... .+....+..+++.. +|+||.|+|.+..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~----~~~~~~~~~~~~~~---~Divi~at~~~~~ 93 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEY----EYVLINDIDSLIKN---NDVIITATSSKTP 93 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTC----EEEECSCHHHHHHT---CSEEEECSCCSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCC----ceEeecCHHHHhcC---CCEEEEeCCCCCc
Confidence 3589999999999999999999999999999999999887765421 23456788888887 9999999998743
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+ +. ...+.+|.+++|.+..
T Consensus 94 ~---~~--~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 94 I---VE--ERSLMPGKLFIDLGNP 112 (144)
T ss_dssp S---BC--GGGCCTTCEEEECCSS
T ss_pred E---ee--HHHcCCCCEEEEccCC
Confidence 2 11 2457789999998763
No 135
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.79 E-value=2.7e-08 Score=97.92 Aligned_cols=99 Identities=15% Similarity=0.086 Sum_probs=71.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC--CcEEEEeCChHHHHHHHHhhhhc---CCCCccc-cCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKKE---GDLPLFG-FRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~~~---~~~~~~~-~~s~~e~~~~l~~~dvIil~ 80 (474)
||||+|||+|.||.++|..|+++| ++|++||+++++++.+....... ....+.. ++++ +.++. +|+||++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~---aDvViia 76 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALAD---ADVVIST 76 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCC---CCEEEEe
Confidence 479999999999999999999999 79999999998887765432100 0001222 3455 44444 9999999
Q ss_pred cCCChh-------------------HHHHHHHHHhcccCCCEEEecCCC
Q 011931 81 VKAGAP-------------------VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 81 vp~~~~-------------------v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+|.+.. +++++..+.+.. ++.+|+..+|.
T Consensus 77 v~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp 124 (309)
T 1hyh_A 77 LGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNP 124 (309)
T ss_dssp CSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSS
T ss_pred cCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCc
Confidence 998653 456667777654 56777777774
No 136
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.77 E-value=2.3e-08 Score=97.70 Aligned_cols=112 Identities=18% Similarity=0.136 Sum_probs=80.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|+|||+|.||..+|+.|...|++|++|||++++.+.+.+.+. ......+++++++. +|+|++++|...
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~-----~~~~~~~l~~~l~~---aDvVi~~~p~~~- 225 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGM-----EPFHISKAAQELRD---VDVCINTIPALV- 225 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTS-----EEEEGGGHHHHTTT---CSEEEECCSSCC-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCC-----eecChhhHHHHhcC---CCEEEECCChHH-
Confidence 357999999999999999999999999999999987665543321 11112456666665 999999999752
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
+. .+.+..++++.++||++....... + +.....|+.++.+|
T Consensus 226 i~---~~~l~~mk~~~~lin~ar~~~~~~--~-~~a~~~Gv~~~~~~ 266 (293)
T 3d4o_A 226 VT---ANVLAEMPSHTFVIDLASKPGGTD--F-RYAEKRGIKALLVP 266 (293)
T ss_dssp BC---HHHHHHSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECC
T ss_pred hC---HHHHHhcCCCCEEEEecCCCCCCC--H-HHHHHCCCEEEECC
Confidence 21 233456789999999997543332 2 34455688877665
No 137
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.73 E-value=6.9e-09 Score=103.88 Aligned_cols=122 Identities=12% Similarity=0.111 Sum_probs=89.7
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHH--CCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAE--KGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~--~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
....+|+|||+|.||..++..|.. ...+|.+|||++++.+++.+......+..+..+.+++++++. +|+|++|+|
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~---aDiVi~aTp 203 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKG---VDIITTVTA 203 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTT---CSEEEECCC
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhc---CCEEEEecc
Confidence 345689999999999999998864 346899999999999999876421000014567789999887 999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
... ...++. .+.+++|.+|++.++..|. .+++...+..++..|+|..
T Consensus 204 s~~-~~pvl~--~~~l~~G~~V~~vgs~~p~-~~El~~~~~~~a~v~vD~~ 250 (350)
T 1x7d_A 204 DKA-YATIIT--PDMLEPGMHLNAVGGDCPG-KTELHADVLRNARVFVEYE 250 (350)
T ss_dssp CSS-EEEEEC--GGGCCTTCEEEECSCCBTT-BEEECHHHHHTSEEEESSH
T ss_pred CCC-CCceec--HHHcCCCCEEEECCCCCCC-ceeeCHHHHhcCcEEECCH
Confidence 862 122221 2467899999999998776 4555555656677888863
No 138
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.73 E-value=9.8e-08 Score=86.27 Aligned_cols=117 Identities=9% Similarity=0.054 Sum_probs=76.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHhhhhcCCCCcccc-CCHHHHHhh--cCCCcEEEEecC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGDLPLFGF-RDPESFVNS--IQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~-~s~~e~~~~--l~~~dvIil~vp 82 (474)
.++|.|+|+|.||..++..|.+. |++|+++|+++++.+.+.+.+... +... ++.+.+.+. ++++|+||+++|
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~----~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNV----ISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCE----EECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCE----EEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 35899999999999999999999 999999999999988877644210 1111 233323222 456999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
++.....++..+ ..+.+...|+..++. +.. .+.+.+.|+.++..|
T Consensus 115 ~~~~~~~~~~~~-~~~~~~~~ii~~~~~-~~~----~~~l~~~G~~~vi~p 159 (183)
T 3c85_A 115 HHQGNQTALEQL-QRRNYKGQIAAIAEY-PDQ----LEGLLESGVDAAFNI 159 (183)
T ss_dssp SHHHHHHHHHHH-HHTTCCSEEEEEESS-HHH----HHHHHHHTCSEEEEH
T ss_pred ChHHHHHHHHHH-HHHCCCCEEEEEECC-HHH----HHHHHHcCCCEEEch
Confidence 865544444433 334444444444332 222 234556688777665
No 139
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.72 E-value=9e-08 Score=95.00 Aligned_cols=113 Identities=11% Similarity=0.104 Sum_probs=83.5
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
+|+||||||+|.||..++..|.+. +++|. ++|+++++.+++.+.. ++. +++++++++. ..+|+|++|+|+
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~------~~~-~~~~~~~l~~-~~~D~V~i~tp~ 73 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAY------GCE-VRTIDAIEAA-ADIDAVVICTPT 73 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT------TCE-ECCHHHHHHC-TTCCEEEECSCG
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHh------CCC-cCCHHHHhcC-CCCCEEEEeCCc
Confidence 356999999999999999999985 77876 7999999988887754 255 8899999872 238999999999
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
....+.+.. . +..|. ++++.- +..+...+++.+..++.|+.+.
T Consensus 74 ~~h~~~~~~-a---l~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~ 118 (331)
T 4hkt_A 74 DTHADLIER-F---ARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLM 118 (331)
T ss_dssp GGHHHHHHH-H---HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred hhHHHHHHH-H---HHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 765544433 2 33454 445433 4556777778887777776554
No 140
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.70 E-value=1.2e-07 Score=78.62 Aligned_cols=108 Identities=11% Similarity=0.068 Sum_probs=73.0
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
.++++|.|+|+|.||..++..|.+.| ++|+++||++++.+.+...+... -..-..+.+++.+.++.+|+||.++|.
T Consensus 3 ~~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 3 AMRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVAT---KQVDAKDEAGLAKALGGFDAVISAAPF 79 (118)
T ss_dssp TTCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEE---EECCTTCHHHHHHHTTTCSEEEECSCG
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcE---EEecCCCHHHHHHHHcCCCEEEECCCc
Confidence 34568999999999999999999999 99999999999888776322110 000122334444444559999999986
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHH
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREK 120 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~ 120 (474)
. ....++... ...|..++|.++.. ..++.+.+
T Consensus 80 ~-~~~~~~~~~---~~~g~~~~~~~~~~-~~~~~~~~ 111 (118)
T 3ic5_A 80 F-LTPIIAKAA---KAAGAHYFDLTEDV-AATNAVRA 111 (118)
T ss_dssp G-GHHHHHHHH---HHTTCEEECCCSCH-HHHHHHHH
T ss_pred h-hhHHHHHHH---HHhCCCEEEecCcH-HHHHHHHH
Confidence 5 344444433 34678888887654 34444443
No 141
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.70 E-value=1.5e-07 Score=81.15 Aligned_cols=117 Identities=11% Similarity=0.106 Sum_probs=74.9
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhh--cCCCcEEEEecCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNS--IQKPRVIIMLVKA 83 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~--l~~~dvIil~vp~ 83 (474)
+|++|.|+|+|.+|..++..|.+.|++|+++|+++++++.+.+.+... +....+..+.... ++++|+||+++|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~----~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDA----VIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEE----EECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcE----EECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 456899999999999999999999999999999999998887654210 1111222233332 3469999999996
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
. .....+...+..+....+|+-..+.. . .+.+...|+..+-.|
T Consensus 81 ~-~~n~~~~~~a~~~~~~~iia~~~~~~--~----~~~l~~~G~~~vi~p 123 (141)
T 3llv_A 81 D-EFNLKILKALRSVSDVYAIVRVSSPK--K----KEEFEEAGANLVVLV 123 (141)
T ss_dssp H-HHHHHHHHHHHHHCCCCEEEEESCGG--G----HHHHHHTTCSEEEEH
T ss_pred H-HHHHHHHHHHHHhCCceEEEEEcChh--H----HHHHHHcCCCEEECH
Confidence 5 33333333444444556666554432 2 233455677654443
No 142
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.70 E-value=1.1e-07 Score=93.37 Aligned_cols=112 Identities=13% Similarity=0.171 Sum_probs=82.3
Q ss_pred CcCcEEEEcccHhHHH-HHHHHHH-CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAGLAVMGQN-LALNIAE-KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~-lA~~L~~-~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+++||||||+|.||.. ++..|.+ .++++. ++|+++++.+++.+... +..+++++++++. +|+|++|+|
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~------~~~~~~~~~ll~~---~D~V~i~tp 75 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYR------IMPFDSIESLAKK---CDCIFLHSS 75 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHT------CCBCSCHHHHHTT---CSEEEECCC
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC------CCCcCCHHHHHhc---CCEEEEeCC
Confidence 3578999999999996 8888877 467776 89999999998877642 3458899999886 999999999
Q ss_pred CChhHHHHHHHHHhcccCCC-EEEe-cCCCCchhHHHHHHHHHHcCCeEE
Q 011931 83 AGAPVDETIKTLSAYMEKGD-CIID-GGNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~-iiId-~st~~~~~~~~~~~~l~~~g~~~v 130 (474)
+....+.+.. .+..|. ++++ -.+..+...+++.+..++.|+.+.
T Consensus 76 ~~~h~~~~~~----al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~ 121 (308)
T 3uuw_A 76 TETHYEIIKI----LLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLM 121 (308)
T ss_dssp GGGHHHHHHH----HHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEE
T ss_pred cHhHHHHHHH----HHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9855444332 234555 4444 344556677778777777776543
No 143
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.69 E-value=1.4e-07 Score=81.62 Aligned_cols=117 Identities=19% Similarity=0.248 Sum_probs=75.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhh--cCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNS--IQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~--l~~~dvIil~vp~~ 84 (474)
+.+|.|+|+|.+|..+|..|.+.|++|+++|+++++++.+.+.+... +....+..+.... ++++|+||+++|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~----i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRA----VLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEE----EESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCE----EECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 45799999999999999999999999999999999998887654210 1112222333322 34599999999986
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
.....++.. +..+.++..+|-..+.. ...+.+.+.|+..+-.|
T Consensus 83 ~~n~~~~~~-a~~~~~~~~iiar~~~~-----~~~~~l~~~G~d~vi~p 125 (140)
T 3fwz_A 83 YEAGEIVAS-ARAKNPDIEIIARAHYD-----DEVAYITERGANQVVMG 125 (140)
T ss_dssp HHHHHHHHH-HHHHCSSSEEEEEESSH-----HHHHHHHHTTCSEEEEH
T ss_pred HHHHHHHHH-HHHHCCCCeEEEEECCH-----HHHHHHHHCCCCEEECc
Confidence 443333333 33344444444433321 23345566777655444
No 144
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.68 E-value=1.4e-07 Score=94.48 Aligned_cols=114 Identities=15% Similarity=0.198 Sum_probs=83.6
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC--CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK--GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~--G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+++||||||+|.||..++..|.+. +++|. ++|+++++.+++.+.. ++..+++++++++. ..+|+|++|+|
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~------~~~~~~~~~~ll~~-~~~D~V~i~tp 84 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT------GARGHASLTDMLAQ-TDADIVILTTP 84 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH------CCEEESCHHHHHHH-CCCSEEEECSC
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc------CCceeCCHHHHhcC-CCCCEEEECCC
Confidence 456899999999999999999987 67765 8999999998887754 25678899999873 23899999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEE-ecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 83 AGAPVDETIKTLSAYMEKGDCII-DGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiI-d~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
+....+.+.. .+..|..|+ +-- +..+...+++.+..++.|+.+.
T Consensus 85 ~~~h~~~~~~----al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~ 130 (354)
T 3q2i_A 85 SGLHPTQSIE----CSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLF 130 (354)
T ss_dssp GGGHHHHHHH----HHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred cHHHHHHHHH----HHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 9755443332 234555444 322 3445667777777777776553
No 145
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.65 E-value=1.8e-07 Score=92.94 Aligned_cols=115 Identities=10% Similarity=0.158 Sum_probs=84.5
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~-~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+++||||||+|.||..++..|.+. +++|. ++|+++++.+++.+... + ..+++++++++. ..+|+|++|+|
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~------~~~~~~~~~~ll~~-~~~D~V~i~tp 76 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELA------IPVAYGSYEELCKD-ETIDIIYIPTY 76 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTT------CCCCBSSHHHHHHC-TTCSEEEECCC
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcC------CCceeCCHHHHhcC-CCCCEEEEcCC
Confidence 356899999999999999999985 67776 88999999988877642 3 467899999872 23899999999
Q ss_pred CChhHHHHHHHHHhcccCC-CEEEecC-CCCchhHHHHHHHHHHcCCeEEe
Q 011931 83 AGAPVDETIKTLSAYMEKG-DCIIDGG-NEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g-~iiId~s-t~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
+....+.+... +..| .++++.- +..+...+++.+..++.|+.+..
T Consensus 77 ~~~h~~~~~~a----l~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v 123 (330)
T 3e9m_A 77 NQGHYSAAKLA----LSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLME 123 (330)
T ss_dssp GGGHHHHHHHH----HHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHH----HHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 98655444332 3344 4666544 45556777777777777765543
No 146
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.65 E-value=1.3e-07 Score=94.32 Aligned_cols=113 Identities=15% Similarity=0.162 Sum_probs=82.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
++||||||+|.||..++..|.+. +++|. ++|+++++.+++.+.. +...+++++++++. ..+|+|++|+|+.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~~~~l~~-~~~D~V~i~tp~~ 76 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEAN------GAEAVASPDEVFAR-DDIDGIVIGSPTS 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTT------TCEEESSHHHHTTC-SCCCEEEECSCGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc------CCceeCCHHHHhcC-CCCCEEEEeCCch
Confidence 46899999999999999999986 67766 8999999988887653 25678899999872 2389999999997
Q ss_pred hhHHHHHHHHHhcccCC-CEEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 85 APVDETIKTLSAYMEKG-DCIIDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g-~iiId~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
...+.+.. . +..| .++++.. +..+...+++.+..++.|+.+.
T Consensus 77 ~h~~~~~~-a---l~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~ 120 (344)
T 3euw_A 77 THVDLITR-A---VERGIPALCEKPIDLDIEMVRACKEKIGDGASKVM 120 (344)
T ss_dssp GHHHHHHH-H---HHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEE
T ss_pred hhHHHHHH-H---HHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEE
Confidence 65544433 2 3334 4666543 4455667777777766665443
No 147
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.64 E-value=8.1e-08 Score=94.88 Aligned_cols=100 Identities=13% Similarity=0.193 Sum_probs=70.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~----~-~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
.+||+|||+|.||.++|..|+.+|+ +|++||+++++++........ . ...++..+++. +.++. +|+||++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~---aDiVi~a 79 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISG---SDVVIIT 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC---CCEEEEe
Confidence 3689999999999999999999999 999999998877653211000 0 00134444566 44555 9999999
Q ss_pred cCCC---------------hhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 81 VKAG---------------APVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 81 vp~~---------------~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
++.+ ..+++++..+.+.. ++.+++..||..
T Consensus 80 vg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~ 124 (317)
T 2ewd_A 80 ASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPL 124 (317)
T ss_dssp CCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSH
T ss_pred CCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChH
Confidence 9432 12456667777764 688999988854
No 148
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.64 E-value=1.7e-07 Score=93.55 Aligned_cols=114 Identities=12% Similarity=0.199 Sum_probs=83.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
|+||||||+|.||..++..|.+. +++|. ++|+++++.+++.+.... ...+++++++++. ..+|+|++|+|+.
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~-~~~D~V~i~tp~~ 75 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGV-----EKAYKDPHELIED-PNVDAVLVCSSTN 75 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTC-----SEEESSHHHHHHC-TTCCEEEECSCGG
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCC-----CceeCCHHHHhcC-CCCCEEEEcCCCc
Confidence 56999999999999999999875 66766 889999999888775421 2468899999882 2389999999997
Q ss_pred hhHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 85 APVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
...+.+.. .+..|. ++++.- +..+...+++.+..++.|+.+.
T Consensus 76 ~h~~~~~~----al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~ 119 (344)
T 3ezy_A 76 THSELVIA----CAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILF 119 (344)
T ss_dssp GHHHHHHH----HHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEE
T ss_pred chHHHHHH----HHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEE
Confidence 55444332 233455 555543 4556677778877777776543
No 149
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.64 E-value=6.2e-08 Score=96.28 Aligned_cols=118 Identities=17% Similarity=0.219 Sum_probs=93.9
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|||||+|.+|+.+|+.+...|.+|.+||+.+... ..+.+ ....++++++++ ||+|++.+|-....
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~--~~~~~--------~~~~~l~ell~~---sDivslh~Plt~~T 208 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED--LKEKG--------CVYTSLDELLKE---SDVISLHVPYTKET 208 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHTT--------CEECCHHHHHHH---CSEEEECCCCCTTT
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchh--hhhcC--------ceecCHHHHHhh---CCEEEEcCCCChhh
Confidence 579999999999999999999999999999876432 22221 235689999998 99999999988777
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCCCc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGE 138 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~ 138 (474)
+.++ .+.+..+++|.++|+++-+..-+...+.+.|++..+.....-|.-.+
T Consensus 209 ~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~E 260 (334)
T 3kb6_A 209 HHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDE 260 (334)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTH
T ss_pred ccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCC
Confidence 7777 56677899999999999999889999999887655544444454443
No 150
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.63 E-value=1.4e-07 Score=93.25 Aligned_cols=98 Identities=17% Similarity=0.289 Sum_probs=68.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhc----CCCCccccCCHHHHHhhcCCCcEEEEec
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKE----GDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~----~~~~~~~~~s~~e~~~~l~~~dvIil~v 81 (474)
|||+|||+|.||.++|..|+.+|+ +|++||+++++++.+....... ...++.. ++. +.++. +|+||+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~d~-~~~~~---aDvViiav 75 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-GDY-ADLKG---SDVVIVAA 75 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-CCG-GGGTT---CSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe-CCH-HHhCC---CCEEEEcc
Confidence 589999999999999999999999 9999999998877655321100 0001222 243 33444 99999999
Q ss_pred CCChh---------------HHHHHHHHHhcccCCCEEEecCCCC
Q 011931 82 KAGAP---------------VDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 82 p~~~~---------------v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
|.+.. +++++..+.+.. ++.+||..||..
T Consensus 76 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~ 119 (319)
T 1a5z_A 76 GVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPV 119 (319)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcH
Confidence 97541 355666676654 677777777743
No 151
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.63 E-value=2.2e-07 Score=93.13 Aligned_cols=113 Identities=15% Similarity=0.231 Sum_probs=83.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
++||||||+|.||..++..|.+. +++|. ++|+++++.+++.+... +..+++++++++. ..+|+|++|+|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g------~~~~~~~~~~l~~-~~~D~V~i~tp~~ 77 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYN------CAGDATMEALLAR-EDVEMVIITVPND 77 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHT------CCCCSSHHHHHHC-SSCCEEEECSCTT
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC------CCCcCCHHHHhcC-CCCCEEEEeCChH
Confidence 35899999999999999999887 77865 88999999988876542 4568899999843 2389999999998
Q ss_pred hhHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 85 APVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
...+.+.. .+..|. ++++.- +..+...+++.+..+++|+.+.
T Consensus 78 ~h~~~~~~----al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~ 121 (354)
T 3db2_A 78 KHAEVIEQ----CARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFL 121 (354)
T ss_dssp SHHHHHHH----HHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHH----HHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 65554433 233455 555533 4455677777777777776543
No 152
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.63 E-value=2.4e-07 Score=91.98 Aligned_cols=104 Identities=11% Similarity=0.141 Sum_probs=73.6
Q ss_pred CCCcCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCcEE
Q 011931 4 GKQLTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPRVI 77 (474)
Q Consensus 4 ~~~~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~----~-~~~~~~~~~s~~e~~~~l~~~dvI 77 (474)
..+.|||+|||+|.||.++|..|+.+|+ +|.+||+++++++........ . ...++..++++++.++. +|+|
T Consensus 6 ~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~---aDiV 82 (331)
T 1pzg_A 6 VQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTG---ADCV 82 (331)
T ss_dssp CSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTT---CSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCC---CCEE
Confidence 3445799999999999999999999998 999999999877663221100 0 01145556788877776 9999
Q ss_pred EEec--CCCh------------------hHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 78 IMLV--KAGA------------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 78 il~v--p~~~------------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
|+++ |... .++++...+.+.. +..+++..||..
T Consensus 83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~ 135 (331)
T 1pzg_A 83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPL 135 (331)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCch
Confidence 9999 4321 1455556666654 777888776643
No 153
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.61 E-value=2.5e-07 Score=91.84 Aligned_cols=100 Identities=14% Similarity=0.244 Sum_probs=69.8
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~----~-~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
+++||+|||+|.||.++|..|+.+|+ +|.+||+++++++........ . ...+++.+++. +.++. +|+||+
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~---aD~VI~ 88 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN---SDVVII 88 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT---CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC---CCEEEE
Confidence 34689999999999999999999999 999999999887753211100 0 01135555666 44555 999999
Q ss_pred ecCCCh---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+++.+. .++++...+.+.. ++.+++..||.
T Consensus 89 avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP 133 (328)
T 2hjr_A 89 TAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNP 133 (328)
T ss_dssp CCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred cCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCc
Confidence 994332 1445556666655 77788777773
No 154
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.61 E-value=8.5e-08 Score=93.85 Aligned_cols=117 Identities=17% Similarity=0.163 Sum_probs=81.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.++|.|||+|.||.+++..|++.|+ +|+++||++++.+++.+....... .+....++.+.+.. +|+||.|+|.+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~~~~~~~~~~~~~~---aDivIn~t~~~~ 216 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-AYFSLAEAETRLAE---YDIIINTTSVGM 216 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-CEECHHHHHHTGGG---CSEEEECSCTTC
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-ceeeHHHHHhhhcc---CCEEEECCCCCC
Confidence 3579999999999999999999998 999999999999888765421000 01111233344444 999999999764
Q ss_pred h--HHHH-HHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 86 P--VDET-IKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 86 ~--v~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
. .+.+ +. ...++++.+++|++.. |..|. +.+..+++|..+++
T Consensus 217 ~~~~~~~~i~--~~~l~~~~~v~D~~y~-P~~T~-ll~~A~~~G~~~v~ 261 (297)
T 2egg_A 217 HPRVEVQPLS--LERLRPGVIVSDIIYN-PLETK-WLKEAKARGARVQN 261 (297)
T ss_dssp SSCCSCCSSC--CTTCCTTCEEEECCCS-SSSCH-HHHHHHHTTCEEEC
T ss_pred CCCCCCCCCC--HHHcCCCCEEEEcCCC-CCCCH-HHHHHHHCcCEEEC
Confidence 2 1100 11 2346789999999995 55553 66667778887664
No 155
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.60 E-value=5.1e-08 Score=98.22 Aligned_cols=114 Identities=11% Similarity=0.105 Sum_probs=81.6
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|+|||+|.||+.++..|++. ++|+++||++++++++.+..... ...+.-..++++++++ +|+||.|+|....
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~-~~d~~~~~~l~~ll~~---~DvVIn~~P~~~~- 90 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPL-KVDASNFDKLVEVMKE---FELVIGALPGFLG- 90 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEE-ECCTTCHHHHHHHHTT---CSCEEECCCHHHH-
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeE-EEecCCHHHHHHHHhC---CCEEEECCChhhh-
Confidence 5899999999999999999998 99999999999998877543100 0001112334555555 9999999987533
Q ss_pred HHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
..+. ...++.|..++|++... ..+.++.+..+++|+.++.
T Consensus 91 ~~v~---~a~l~~G~~~vD~s~~~-~~~~~l~~~Ak~aG~~~l~ 130 (365)
T 2z2v_A 91 FKSI---KAAIKSKVDMVDVSFMP-ENPLELRDEAEKAQVTIVF 130 (365)
T ss_dssp HHHH---HHHHHTTCCEEECCCCS-SCGGGGHHHHHHTTCEEEC
T ss_pred HHHH---HHHHHhCCeEEEccCCc-HHHHHHHHHHHHcCCEEEE
Confidence 2333 23466899999998764 4555677777888887763
No 156
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.59 E-value=5.8e-08 Score=96.13 Aligned_cols=116 Identities=10% Similarity=0.109 Sum_probs=86.0
Q ss_pred CcCcEEEEcccHhHHHHHHHHHH--CCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAE--KGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~--~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
...+|+|||+|.||..++..|.+ ...+|.+|||++++.+++.+..... ...+. +.++++++ . +|+|++|+|.
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~-~~~~~-~~~~~e~v-~---aDvVi~aTp~ 197 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDR-GISAS-VQPAEEAS-R---CDVLVTTTPS 197 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHT-TCCEE-ECCHHHHT-S---SSEEEECCCC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhc-CceEE-ECCHHHHh-C---CCEEEEeeCC
Confidence 45689999999999999999987 3468999999999999988764321 01245 77888888 7 9999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
... ++. .+.+++|.+|++.++..|. .+++...+..++..|+|.+
T Consensus 198 ~~p---v~~--~~~l~~G~~V~~ig~~~p~-~~el~~~~~~~a~v~vD~~ 241 (322)
T 1omo_A 198 RKP---VVK--AEWVEEGTHINAIGADGPG-KQELDVEILKKAKIVVDDL 241 (322)
T ss_dssp SSC---CBC--GGGCCTTCEEEECSCCSTT-CCCBCHHHHHTEEEEESCH
T ss_pred CCc---eec--HHHcCCCeEEEECCCCCCC-ccccCHHHHhcCeEEECCH
Confidence 642 221 2467899999999887765 3344444445556788864
No 157
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.57 E-value=1.2e-07 Score=83.42 Aligned_cols=116 Identities=16% Similarity=0.188 Sum_probs=70.0
Q ss_pred CCCCcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHH-HhhhhcCCCCccc-cCCHHHHHhh-cCCCcEEEE
Q 011931 3 EGKQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETV-ERAKKEGDLPLFG-FRDPESFVNS-IQKPRVIIM 79 (474)
Q Consensus 3 ~~~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~~~~~~~~~~-~~s~~e~~~~-l~~~dvIil 79 (474)
+....++|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+. ..+.. -+.. ..+.+.+.+. ++.+|+||+
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~----~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF----TVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE----EEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc----EEEecCCCHHHHHHcCcccCCEEEE
Confidence 344457899999999999999999999999999999998876654 22210 0111 1122222211 345999999
Q ss_pred ecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011931 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (474)
+++++. ....+..+...+.+...++-..+.. ... +.+.+.|+.
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~~~~iv~~~~~~-~~~----~~l~~~G~~ 133 (155)
T 2g1u_A 91 FTNDDS-TNFFISMNARYMFNVENVIARVYDP-EKI----KIFEENGIK 133 (155)
T ss_dssp CSSCHH-HHHHHHHHHHHTSCCSEEEEECSSG-GGH----HHHHTTTCE
T ss_pred EeCCcH-HHHHHHHHHHHHCCCCeEEEEECCH-HHH----HHHHHCCCc
Confidence 999864 3334444444434444444444432 222 234445665
No 158
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.57 E-value=3.6e-07 Score=91.05 Aligned_cols=119 Identities=12% Similarity=0.220 Sum_probs=80.9
Q ss_pred CCCCCCcCcEEEEcccHhHHHHHHHHH-H-CCCcE-EEEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcE
Q 011931 1 MVEGKQLTRIGLAGLAVMGQNLALNIA-E-KGFPI-SVYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRV 76 (474)
Q Consensus 1 m~~~~~~~~IgiIGlG~mG~~lA~~L~-~-~G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~-~~~~s~~e~~~~l~~~dv 76 (474)
|....++++|||||+|.||..++..|. + .+++| .++|+++++.+.+.+.. ++ ..+++++++++. ..+|+
T Consensus 2 m~~~~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~------g~~~~~~~~~~~l~~-~~~D~ 74 (346)
T 3cea_A 2 MVTTRKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNEL------GVETTYTNYKDMIDT-ENIDA 74 (346)
T ss_dssp ---CCCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTT------CCSEEESCHHHHHTT-SCCSE
T ss_pred CCCCCCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHh------CCCcccCCHHHHhcC-CCCCE
Confidence 545556679999999999999999998 5 36775 58999999988877643 23 457889998863 23899
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCE-EEec-CCCCchhHHHHHHHHHHc-CCeEE
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDC-IIDG-GNEWYENTERREKAMAEL-GLLYL 130 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~i-iId~-st~~~~~~~~~~~~l~~~-g~~~v 130 (474)
|++|+|+....+.+.. .++.|.. +++. .+..+...+++.+..++. |+.+.
T Consensus 75 V~i~tp~~~h~~~~~~----al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~ 127 (346)
T 3cea_A 75 IFIVAPTPFHPEMTIY----AMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQ 127 (346)
T ss_dssp EEECSCGGGHHHHHHH----HHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEE
T ss_pred EEEeCChHhHHHHHHH----HHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEE
Confidence 9999998755444332 3445664 4442 233445666666666666 66544
No 159
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.55 E-value=5e-07 Score=90.41 Aligned_cols=113 Identities=13% Similarity=0.115 Sum_probs=83.2
Q ss_pred cCcEEEEcccHhHH-HHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQ-NLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~-~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++||||||+|.||. .++..|.+. +++|. ++|+++++.+++.+.. ++..+++++++++. ...|+|++|+|+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~~~ll~~-~~~D~V~i~tp~ 99 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF------GGEPVEGYPALLER-DDVDAVYVPLPA 99 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH------CSEEEESHHHHHTC-TTCSEEEECCCG
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc------CCCCcCCHHHHhcC-CCCCEEEECCCc
Confidence 45899999999998 799999887 67775 8899999998887754 25566899999863 348999999999
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
....+.+... +..|. ++++-- +....+.+++.+..++.|+.+.
T Consensus 100 ~~h~~~~~~a----l~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 144 (350)
T 3rc1_A 100 VLHAEWIDRA----LRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLM 144 (350)
T ss_dssp GGHHHHHHHH----HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHH----HHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 8655544332 34555 555532 4455677788887777776554
No 160
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.54 E-value=4.7e-07 Score=89.09 Aligned_cols=97 Identities=18% Similarity=0.157 Sum_probs=66.8
Q ss_pred CcEEEEcccHhHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhh-----cCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 8 TRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKK-----EGDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~-----~~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
|||+|||+|.||.++|..|+.+ |++|++||+++++++........ ....++..++++++ ++. +|+||++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~---aDvViia 76 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TAN---SDIVIIT 76 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTT---CSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCC---CCEEEEe
Confidence 5899999999999999999985 79999999999887755321110 00002444566666 555 9999999
Q ss_pred cCCCh---------------hHHHHHHHHHhcccCCCEEEecCC
Q 011931 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 109 (474)
+|.+. .++++.+.+.+.. ++.+|+..||
T Consensus 77 v~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tN 119 (310)
T 1guz_A 77 AGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSN 119 (310)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcC
Confidence 97642 1234445565554 6677777766
No 161
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.54 E-value=5.6e-07 Score=88.74 Aligned_cols=112 Identities=18% Similarity=0.186 Sum_probs=79.8
Q ss_pred CcCcEEEEcccHhHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+++||||||+|.||.. ++..|.+. +++|. ++|+++++.+++.+... +..+++.+++... +|+|++++|
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g------~~~~~~~~~l~~~---~D~V~i~tp 74 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWR------IPYADSLSSLAAS---CDAVFVHSS 74 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHT------CCBCSSHHHHHTT---CSEEEECSC
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC------CCccCcHHHhhcC---CCEEEEeCC
Confidence 3468999999999997 88888764 67776 99999999888776542 3456778777444 999999999
Q ss_pred CChhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011931 83 AGAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~v 130 (474)
+....+.+.. .++.|. ++++. .+..+.+.+++.+..++.|+.+.
T Consensus 75 ~~~h~~~~~~----al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~ 120 (319)
T 1tlt_A 75 TASHFDVVST----LLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLM 120 (319)
T ss_dssp TTHHHHHHHH----HHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred chhHHHHHHH----HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 8754443332 344566 56663 34456677777777777776554
No 162
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.53 E-value=4.7e-07 Score=90.34 Aligned_cols=114 Identities=15% Similarity=0.182 Sum_probs=82.2
Q ss_pred cCcEEEEcccHhHHHHHHHHH-H-CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIA-E-KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~-~-~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++||||||+|.||..++..|. + .+++|. ++|+++++.+++.+.... ....+++++++++. .++|+|++|+|+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~----~~~~~~~~~~ll~~-~~~D~V~i~tp~ 76 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQL----NATVYPNDDSLLAD-ENVDAVLVTSWG 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTC----CCEEESSHHHHHHC-TTCCEEEECSCG
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCC----CCeeeCCHHHHhcC-CCCCEEEECCCc
Confidence 468999999999999999998 4 467766 889999999888775420 14578899999874 347999999999
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeE
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~ 129 (474)
....+.+.. .++.|. ++++-- +......+++.+..++.|+.+
T Consensus 77 ~~h~~~~~~----al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 77 PAHESSVLK----AIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp GGHHHHHHH----HHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred hhHHHHHHH----HHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 765544432 344565 444433 445566777777777777644
No 163
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.52 E-value=5.9e-07 Score=88.83 Aligned_cols=114 Identities=11% Similarity=0.177 Sum_probs=81.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHH-hhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFV-NSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~-~~l~~~dvIil~vp~ 83 (474)
|+||||||+|.||..++..|.+. ++++ .++|+++++.+++.+... ....++++++++ .. +|+|++|+|+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~---~D~V~i~tp~ 72 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQ-----NIQLFDQLEVFFKSS---FDLVYIASPN 72 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSS-----SCEEESCHHHHHTSS---CSEEEECSCG
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcC-----CCeEeCCHHHHhCCC---CCEEEEeCCh
Confidence 46899999999999999999886 5666 489999998887765431 124678899988 44 8999999998
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEec
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLGM 132 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~v~~ 132 (474)
....+ ++.. .++.|. ++++. .+......+++.+..++.|+.+..+
T Consensus 73 ~~h~~-~~~~---al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~ 119 (325)
T 2ho3_A 73 SLHFA-QAKA---ALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEA 119 (325)
T ss_dssp GGHHH-HHHH---HHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHH-HHHH---HHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 75443 3332 344566 55553 3445566777777777777765443
No 164
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.51 E-value=5.6e-07 Score=88.30 Aligned_cols=99 Identities=13% Similarity=0.220 Sum_probs=65.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCC--CCcccc-CCHHHHHhhcCCCcEEEEecC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGD--LPLFGF-RDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~~~--~~~~~~-~s~~e~~~~l~~~dvIil~vp 82 (474)
|||+|||+|.||.++|..|+.+|+ +|.++|+++++++........... .+.... ++. +.++ .+|+||++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~a~~---~aDvVIi~~~ 76 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH-SELA---DAQVVILTAG 76 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG-GGGT---TCSEEEECC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH-HHhC---CCCEEEEcCC
Confidence 589999999999999999999999 999999999877654332211000 011121 233 3344 4999999996
Q ss_pred CCh---------------hHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 83 AGA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 83 ~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
.+. .+++++..+.+. .++.+|+..||..
T Consensus 77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~ 119 (304)
T 2v6b_A 77 ANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPV 119 (304)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSH
T ss_pred CCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCch
Confidence 543 134555666665 4778888777743
No 165
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.50 E-value=5.5e-07 Score=88.98 Aligned_cols=112 Identities=10% Similarity=0.091 Sum_probs=76.7
Q ss_pred cCcEEEEcccHhHH-HHHHHHHHC-CCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQ-NLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~-~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++||||||+|.||. .++..|.+. +++|.++|+++++.+++.+... +.. +.+..+++. ..+|+|++|+|+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g------~~~~~~~~~~~l~--~~~D~V~i~tp~ 73 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR------VSATCTDYRDVLQ--YGVDAVMIHAAT 73 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT------CCCCCSSTTGGGG--GCCSEEEECSCG
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcC------CCccccCHHHHhh--cCCCEEEEECCc
Confidence 46899999999998 599988775 6788899999999988876542 222 334444442 239999999998
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~v 130 (474)
....+ ++.. .++.|. ++++. .+......+++.+..++.|+.+.
T Consensus 74 ~~h~~-~~~~---al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~ 118 (323)
T 1xea_A 74 DVHST-LAAF---FLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLY 118 (323)
T ss_dssp GGHHH-HHHH---HHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred hhHHH-HHHH---HHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEE
Confidence 75443 3322 234554 66663 34455667777777777776554
No 166
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.49 E-value=1.3e-06 Score=86.49 Aligned_cols=114 Identities=12% Similarity=0.129 Sum_probs=81.4
Q ss_pred CcEEEEcccHhHHHH-HHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 8 TRIGLAGLAVMGQNL-ALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 8 ~~IgiIGlG~mG~~l-A~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~-~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
+||||||+|.||..+ +..|.+.+++|. ++|+++++.+++.+... + ..+++++++++. ..+|+|++++|+.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g------~~~~~~~~~~~l~~-~~~D~V~i~tp~~ 73 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENG------IGKSVTSVEELVGD-PDVDAVYVSTTNE 73 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTT------CSCCBSCHHHHHTC-TTCCEEEECSCGG
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcC------CCcccCCHHHHhcC-CCCCEEEEeCChh
Confidence 489999999999998 888887788865 89999999888776532 3 357789998763 2389999999987
Q ss_pred hhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEec
Q 011931 85 APVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLGM 132 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~v~~ 132 (474)
...+.+ .. .++.|. ++++. .+..+...+++.+..++.|+.+..+
T Consensus 74 ~h~~~~-~~---al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~ 119 (332)
T 2glx_A 74 LHREQT-LA---AIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTN 119 (332)
T ss_dssp GHHHHH-HH---HHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred HhHHHH-HH---HHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 544333 22 344676 45543 3445566777777777777765543
No 167
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.47 E-value=5.5e-07 Score=77.24 Aligned_cols=100 Identities=12% Similarity=0.216 Sum_probs=63.3
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHh-hcCCCcEEEEecCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVN-SIQKPRVIIMLVKA 83 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~-~l~~~dvIil~vp~ 83 (474)
++++|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+.+.+.. -+.. ..+.+.+.+ .++++|+||.+++.
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~----~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH----AVIANATEENELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSE----EEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCE----EEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence 34579999999999999999999999999999999887665433210 0111 123332221 13459999999997
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st 109 (474)
+......+...+..+.+..+|+..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 81 NIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred chHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 63333333334444555545544443
No 168
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.47 E-value=9.6e-07 Score=87.30 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=68.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~----~-~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
++||+|||+|.||.++|..|+..|+ +|.++|+++++++........ . ...+++.+++. +.++. +|+||++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~---aD~Vi~a 79 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAG---ADVVIVT 79 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC---CCEEEEe
Confidence 4699999999999999999999998 999999999877643322110 0 01134555666 44555 9999999
Q ss_pred cCCCh--------------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 81 VKAGA--------------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 81 vp~~~--------------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+. .++++...+.+.. ++.++|..||.
T Consensus 80 ~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP 128 (322)
T 1t2d_A 80 AGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNP 128 (322)
T ss_dssp CSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSS
T ss_pred CCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 83321 2445556666655 77787777763
No 169
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.46 E-value=4.5e-07 Score=89.40 Aligned_cols=101 Identities=14% Similarity=0.231 Sum_probs=67.8
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHH--HH-Hhhhhc-CCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDE--TV-ERAKKE-GDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~--l~-~~~~~~-~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
++|||+|||+|.||..+|..|+.+|+ +|+++|+++++++. .. ..+... +..++...++. +.++. +|+||+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~---aD~Vii 81 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRD---ADMVVI 81 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTT---CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHhCC---CCEEEE
Confidence 45799999999999999999999999 99999999877652 21 121100 00012222243 33344 999999
Q ss_pred ecCCCh---------------hHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+++.+. .+++++..+.+. .++.+|+..+|..
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~ 127 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPV 127 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCch
Confidence 996542 122566667664 6788898888854
No 170
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.46 E-value=1.9e-07 Score=92.00 Aligned_cols=116 Identities=13% Similarity=0.179 Sum_probs=81.3
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
....+|+|||+|.||..++..|.+. ..+|.+|||+ +.+++.+......+..+..+ ++++++.. +|+|++|+|
T Consensus 119 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~---aDIVi~aT~ 192 (313)
T 3hdj_A 119 PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APADIAAQ---ADIVVTATR 192 (313)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHH---CSEEEECCC
T ss_pred CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhh---CCEEEEccC
Confidence 3456899999999999999999863 3589999999 55555543211001124456 99999988 999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcC-CeEEec
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELG-LLYLGM 132 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g-~~~v~~ 132 (474)
.... ++. .+.+++|.+|++.++..|.. +++...+-.+. ..|+|.
T Consensus 193 s~~p---vl~--~~~l~~G~~V~~vGs~~p~~-~El~~~~~~~a~~v~vD~ 237 (313)
T 3hdj_A 193 STTP---LFA--GQALRAGAFVGAIGSSLPHT-RELDDEALRRARAVVVEW 237 (313)
T ss_dssp CSSC---SSC--GGGCCTTCEEEECCCSSTTC-CCCCHHHHHHCSEEEESC
T ss_pred CCCc---ccC--HHHcCCCcEEEECCCCCCch-hhcCHHHHhcCCEEEECC
Confidence 8642 232 35688999999999987754 44443333333 467874
No 171
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.46 E-value=1.1e-06 Score=81.70 Aligned_cols=98 Identities=15% Similarity=0.178 Sum_probs=65.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcccc-CCHHHHHh-hcCCCcEEEEecCCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGF-RDPESFVN-SIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~-~s~~e~~~-~l~~~dvIil~vp~~~ 85 (474)
|||.|+|+|.+|..+|..|.+.|++|+++|+++++++++.+..... -+... ++.+.+-+ .++++|+||++++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~---~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d- 76 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT---IIHGDGSHKEILRDAEVSKNDVVVILTPRD- 76 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE---EEESCTTSHHHHHHHTCCTTCEEEECCSCH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe---EEEcCCCCHHHHHhcCcccCCEEEEecCCc-
Confidence 6899999999999999999999999999999999998876542100 01111 22222222 256699999999986
Q ss_pred hHHHHHHHHHhcccCCCEEEecCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st 109 (474)
.....+..++..+.+...+|-..+
T Consensus 77 ~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 77 EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 444444444444434444444333
No 172
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.46 E-value=3.4e-07 Score=94.63 Aligned_cols=99 Identities=9% Similarity=0.003 Sum_probs=77.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|+|||+|.||+.+|+.+...|.+|++||+++.+..+....+ +. ..+++++++. +|+|++++.+..-+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g-------~~-~~~l~ell~~---aDiVi~~~~t~~lI 326 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEG-------FN-VVTLDEIVDK---GDFFITCTGNVDVI 326 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTT-------CE-ECCHHHHTTT---CSEEEECCSSSSSB
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcC-------CE-ecCHHHHHhc---CCEEEECCChhhhc
Confidence 4799999999999999999999999999999988754433322 32 3578888877 99999997543222
Q ss_pred HHHHHHHHhcccCCCEEEecCCCCc-hhHHHHHH
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEWY-ENTERREK 120 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~ 120 (474)
. .+.+..+++|.+|||++.... .+...+.+
T Consensus 327 ~---~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 327 K---LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp C---HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred C---HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 1 356677999999999999987 47766665
No 173
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.46 E-value=5.4e-08 Score=94.10 Aligned_cols=112 Identities=17% Similarity=0.066 Sum_probs=76.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.+++.|||+|.||++++..|++.|. +|+++||++++.+++.... ......++.+++.. +|+||.++|.+-
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~------~~~~~~~~~~~~~~---aDiVInaTp~Gm 187 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI------NKINLSHAESHLDE---FDIIINTTPAGM 187 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC------EEECHHHHHHTGGG---CSEEEECCC---
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc------ccccHhhHHHHhcC---CCEEEECccCCC
Confidence 3579999999999999999999999 9999999998876655321 11122334444445 999999999752
Q ss_pred h--HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 86 P--VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 86 ~--v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
. .+..+ -...++++.+|+|++..+ ..| .+.+..+++|...++
T Consensus 188 ~~~~~~~l--~~~~l~~~~~V~D~vY~P-~~T-~ll~~A~~~G~~~~~ 231 (277)
T 3don_A 188 NGNTDSVI--SLNRLASHTLVSDIVYNP-YKT-PILIEAEQRGNPIYN 231 (277)
T ss_dssp ----CCSS--CCTTCCSSCEEEESCCSS-SSC-HHHHHHHHTTCCEEC
T ss_pred CCCCcCCC--CHHHcCCCCEEEEecCCC-CCC-HHHHHHHHCcCEEeC
Confidence 1 11111 123477899999999874 444 456667778876543
No 174
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.45 E-value=1.2e-06 Score=86.09 Aligned_cols=98 Identities=16% Similarity=0.131 Sum_probs=65.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhc-----CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKE-----GDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~-----~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
+|||+|||+|.||.+++..|+..|+ +|.++|+++++++......... ...+++.+++. +.++. +|+||++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~---aD~Vi~a 77 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN---SDVIVVT 77 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT---CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC---CCEEEEc
Confidence 4799999999999999999999997 9999999988776533221110 01134444566 44454 9999999
Q ss_pred cCCCh---------------hHHHHHHHHHhcccCCCEEEecCC
Q 011931 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 109 (474)
++.+. .++++.+.+.+.. ++.+|+..||
T Consensus 78 ~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tN 120 (309)
T 1ur5_A 78 SGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNN 120 (309)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCC
Confidence 85542 1223334455443 7778877766
No 175
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.44 E-value=1.6e-06 Score=86.06 Aligned_cols=113 Identities=10% Similarity=0.155 Sum_probs=81.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC---Cc-EEEEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcEEEEec
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG---FP-ISVYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G---~~-V~v~dr~~~~~~~l~~~~~~~~~~~~-~~~~s~~e~~~~l~~~dvIil~v 81 (474)
++||||||+|.||..++..|.+.+ ++ |.++|+++++.+++.+... + ..+++++++++. ...|+|++|+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~------~~~~~~~~~~ll~~-~~vD~V~i~t 74 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHD------IPKAYGSYEELAKD-PNVEVAYVGT 74 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHT------CSCEESSHHHHHHC-TTCCEEEECC
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcC------CCcccCCHHHHhcC-CCCCEEEECC
Confidence 569999999999999999998764 34 4588999999998887652 3 468899999873 3489999999
Q ss_pred CCChhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011931 82 KAGAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~v 130 (474)
|+....+.+.. .+..|. ++++- -+......+++.+..+++|+.+.
T Consensus 75 p~~~H~~~~~~----al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~ 121 (334)
T 3ohs_X 75 QHPQHKAAVML----CLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLM 121 (334)
T ss_dssp CGGGHHHHHHH----HHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEE
T ss_pred CcHHHHHHHHH----HHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 99865544433 334555 45553 23455677777777777776544
No 176
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.44 E-value=2.2e-07 Score=88.71 Aligned_cols=105 Identities=13% Similarity=0.134 Sum_probs=74.2
Q ss_pred cEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
+|+|||+|.||++++..|++.|. +|+++||++++.+++.+... .....++.+.+.. +|+||.++|.+-.-
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~------~~~~~~~~~~~~~---aDiVInatp~gm~p 180 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK------IFSLDQLDEVVKK---AKSLFNTTSVGMKG 180 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE------EEEGGGHHHHHHT---CSEEEECSSTTTTS
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc------cCCHHHHHhhhcC---CCEEEECCCCCCCC
Confidence 79999999999999999999998 99999999998877654321 2234566677776 99999999864110
Q ss_pred -HHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011931 88 -DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 88 -~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (474)
...+. .+.+.++.+|+|.... +. .+.+..+++|+.
T Consensus 181 ~~~~i~--~~~l~~~~~V~Divy~-~T---~ll~~A~~~G~~ 216 (253)
T 3u62_A 181 EELPVS--DDSLKNLSLVYDVIYF-DT---PLVVKARKLGVK 216 (253)
T ss_dssp CCCSCC--HHHHTTCSEEEECSSS-CC---HHHHHHHHHTCS
T ss_pred CCCCCC--HHHhCcCCEEEEeeCC-Cc---HHHHHHHHCCCc
Confidence 01111 1235689999999887 32 233344456765
No 177
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.44 E-value=1e-06 Score=88.38 Aligned_cols=114 Identities=13% Similarity=0.239 Sum_probs=81.9
Q ss_pred cCcEEEEcccHhHHHHHHHHH-H-CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIA-E-KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~-~-~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++||||||+|.||..++..|. + .+++|. ++|+++++.+++.+.... ....+++++++++. ..+|+|++|+|+
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~----~~~~~~~~~~ll~~-~~~D~V~i~tp~ 97 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAI----EAKDYNDYHDLIND-KDVEVVIITASN 97 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTC----CCEEESSHHHHHHC-TTCCEEEECSCG
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCC----CCeeeCCHHHHhcC-CCCCEEEEcCCc
Confidence 358999999999999999998 4 367766 899999999888776421 14578899999874 348999999999
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeE
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~ 129 (474)
....+.+.. .+..|. ++++-- +......+++.+..++.|+.+
T Consensus 98 ~~h~~~~~~----al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 98 EAHADVAVA----ALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp GGHHHHHHH----HHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHH----HHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 865544433 234554 445432 445567777777777777643
No 178
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.44 E-value=1.1e-06 Score=87.17 Aligned_cols=115 Identities=12% Similarity=0.157 Sum_probs=83.4
Q ss_pred CcCcEEEEcccHhHH-HHHHHHHHCCCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 6 QLTRIGLAGLAVMGQ-NLALNIAEKGFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~-~lA~~L~~~G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
+++||||||+|.+|. .++..|...+++| .++|+++++.+++.+... ....+++++++++. .+.|+|++|+|+
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~-----~~~~~~~~~~ll~~-~~~D~V~i~tp~ 76 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFP-----SVPFAASAEQLITD-ASIDLIACAVIP 76 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHST-----TCCBCSCHHHHHTC-TTCCEEEECSCG
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcC-----CCcccCCHHHHhhC-CCCCEEEEeCCh
Confidence 457999999999996 6888887778986 599999999888877542 14568899999863 238999999999
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~v 130 (474)
....+.++. .++.|. ++++. .+..+...+++.+..++.|+.+.
T Consensus 77 ~~h~~~~~~----al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 77 CDRAELALR----TLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp GGHHHHHHH----HHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred hhHHHHHHH----HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 765554443 344566 56653 34455677777777777776543
No 179
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.43 E-value=4e-07 Score=95.27 Aligned_cols=117 Identities=9% Similarity=0.182 Sum_probs=84.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHH---HHHhCCCcchhhhHHHHHHHHhhCCCCCCC
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA---RIWKGGCIIRAVFLDRIKKAYDRNADLANL 386 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~---~iW~~gcii~s~ll~~~~~~~~~~~~l~~l 386 (474)
+.++++++|+++|++.+++|+.++|++.+++++ .++|..++. ..|+.| ..+|++++....++.+++.-...
T Consensus 182 ~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~-----lGl~~~~~~~~~~~w~~g-~~~S~l~~~~~~~l~~~d~~~~~ 255 (497)
T 2p4q_A 182 PAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRL-----GGFTDKEISDVFAKWNNG-VLDSFLVEITRDILKFDDVDGKP 255 (497)
T ss_dssp ETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCCHHHHHHHHHHHHTT-TTCBHHHHHHHHHHTCBCTTSSB
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHhcCC-ccccHHHHHHHHHHhcCCCCCcc
Confidence 457899999999999999999999999998862 236766555 558888 47999999887776654321112
Q ss_pred ccChHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCC
Q 011931 387 LVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA--YFDSYRRER 434 (474)
Q Consensus 387 l~~~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~--y~~~~~~~~ 434 (474)
.++...+...+|+++ +|+++.|.++|+|+|.+..++. +...++.+|
T Consensus 256 ~vd~i~D~~~~KgtG--~~~~~~A~~~Gv~~P~~~~av~ar~~s~~k~~r 303 (497)
T 2p4q_A 256 LVEKIMDTAGQKGTG--KWTAINALDLGMPVTLIGEAVFARCLSALKNER 303 (497)
T ss_dssp GGGGSCCCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHhhccchHH--HHHHHHHHHcCCCCchHHHHHHHHHhhcchhhH
Confidence 333322223335556 8999999999999999999984 444444333
No 180
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.41 E-value=1.7e-06 Score=86.90 Aligned_cols=111 Identities=11% Similarity=0.141 Sum_probs=79.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
++||||||+|.||...+..|.+. +++|. ++|+++++.+.. +.. ++..+++++++++. ...|+|++|+|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a-~~~------g~~~~~~~~~ll~~-~~~D~V~i~tp~~ 76 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAA-AQK------GLKIYESYEAVLAD-EKVDAVLIATPND 76 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHH-HTT------TCCBCSCHHHHHHC-TTCCEEEECSCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH-Hhc------CCceeCCHHHHhcC-CCCCEEEEcCCcH
Confidence 46899999999999999999876 67775 789999887643 221 35678899999873 2389999999997
Q ss_pred hhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeE
Q 011931 85 APVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~ 129 (474)
...+.+.. .+..|+ ++++- -+......+++.+..++.|+.+
T Consensus 77 ~h~~~~~~----al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 119 (359)
T 3e18_A 77 SHKELAIS----ALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHF 119 (359)
T ss_dssp GHHHHHHH----HHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHH----HHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 65554433 344565 44442 2344567777777777777654
No 181
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.40 E-value=2.1e-07 Score=80.55 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=79.2
Q ss_pred CcEEEEcc----cHhHHHHHHHHHHCCCcEEEEeCChHHH-HHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 8 TRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKV-DETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 8 ~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~-~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
.+|+|||+ |.+|..++++|.+.||+ +|++||.+. +++ . ++..+.+++|+.+. +|++++++|
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i------~---G~~~~~sl~el~~~---vDlavi~vp 79 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEEL------F---GEEAVASLLDLKEP---VDILDVFRP 79 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEE------T---TEECBSSGGGCCSC---CSEEEECSC
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcC------C---CEEecCCHHHCCCC---CCEEEEEeC
Confidence 47999999 89999999999999997 777777642 111 0 36678889988776 999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
+ ..+.++++++...- .+.+++..++. .+++.+.++++|+++++
T Consensus 80 ~-~~~~~v~~~~~~~g-i~~i~~~~g~~----~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 80 P-SALMDHLPEVLALR-PGLVWLQSGIR----HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp H-HHHTTTHHHHHHHC-CSCEEECTTCC----CHHHHHHHHHTTCCEEE
T ss_pred H-HHHHHHHHHHHHcC-CCEEEEcCCcC----HHHHHHHHHHcCCEEEc
Confidence 8 57788887776643 34677765553 35667777888999886
No 182
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.39 E-value=5.8e-07 Score=93.69 Aligned_cols=117 Identities=18% Similarity=0.304 Sum_probs=85.6
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHH---HHHHhCCCcchhhhHHHHHHHHhh-CCCCCC
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGEL---ARIWKGGCIIRAVFLDRIKKAYDR-NADLAN 385 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i---~~iW~~gcii~s~ll~~~~~~~~~-~~~l~~ 385 (474)
+.++++++|+++|++++..++.++|++.+++++ .+++.+++ +..|+.| .+.|++++....++.+ +.....
T Consensus 178 ~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~-----~Gl~~~~~~~l~~~w~~g-~~~s~l~~~~~~~l~~~d~~~g~ 251 (474)
T 2iz1_A 178 ANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRI-----LGLSNAEIQAIFEEWNEG-ELDSYLIEITKEVLKRKDDEGEG 251 (474)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHTTT-TTCBHHHHHHHHHTTCBCSSSSS
T ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHhcCC-CccccHHHhhhhHhhcCCCCCCh
Confidence 457899999999999999999999999998862 23666555 4558888 4789999988887653 321111
Q ss_pred CccChHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH--HHHhhcCCC
Q 011931 386 LLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA--YFDSYRRER 434 (474)
Q Consensus 386 ll~~~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~--y~~~~~~~~ 434 (474)
..+|...+...+++++ +|+++.|.++|+|+|.+.+++. ++..++.+|
T Consensus 252 ~~vd~i~D~~~~k~tG--~~~~~~A~~~gv~~P~~~~av~ar~~s~~k~~r 300 (474)
T 2iz1_A 252 YIVDKILDKAGNKGTG--KWTSESALDLGVPLPLITESVFARYISTYKDER 300 (474)
T ss_dssp BGGGGBCSCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHCHHHH
T ss_pred hHHHHHHHhhcccchH--HHHHHHHHHcCCCCchHHHHHHHHHhhhhhhhh
Confidence 3444444333446666 9999999999999999999974 444444433
No 183
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.37 E-value=3e-07 Score=88.31 Aligned_cols=110 Identities=19% Similarity=0.172 Sum_probs=77.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
..++.|||+|.||++++..|++.|.+|+++||++++.+++. ... +... +.+++. . +|+||.++|.+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~------~~~~-~~~~l~-~---~DiVInaTp~Gm~ 185 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG------CDCF-MEPPKS-A---FDLIINATSASLH 185 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT------CEEE-SSCCSS-C---CSEEEECCTTCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC------CeEe-cHHHhc-c---CCEEEEcccCCCC
Confidence 35799999999999999999999999999999999998887 321 1221 233322 3 9999999997632
Q ss_pred HHHHH--HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 87 VDETI--KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 87 v~~vl--~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
-+..+ +.+...++++.+|+|+...+ .|. +.+..+++|...++
T Consensus 186 ~~~~l~~~~l~~~l~~~~~v~D~vY~P--~T~-ll~~A~~~G~~~~~ 229 (269)
T 3phh_A 186 NELPLNKEVLKGYFKEGKLAYDLAYGF--LTP-FLSLAKELKTPFQD 229 (269)
T ss_dssp CSCSSCHHHHHHHHHHCSEEEESCCSS--CCH-HHHHHHHTTCCEEC
T ss_pred CCCCCChHHHHhhCCCCCEEEEeCCCC--chH-HHHHHHHCcCEEEC
Confidence 11111 12223456789999999874 443 66666778876554
No 184
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.37 E-value=6.3e-07 Score=88.24 Aligned_cols=135 Identities=13% Similarity=0.116 Sum_probs=90.5
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
+++||||||+|.||..++..|.+. ++++ .++|+++++.+++.+. +..+++++++++. ..+|+|++++|+
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~--------~~~~~~~~~~l~~-~~~D~V~i~tp~ 79 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG--------CVIESDWRSVVSA-PEVEAVIIATPP 79 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT--------CEEESSTHHHHTC-TTCCEEEEESCG
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh--------CcccCCHHHHhhC-CCCCEEEEeCCh
Confidence 346899999999999999999986 5665 4999999877654332 2456788898852 238999999998
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEe-cCCCCchhHHHHHHHHHHcCCeEEecCCCCCcccccCCCccccCCCHHHHHHHHH
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIID-GGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIED 161 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId-~st~~~~~~~~~~~~l~~~g~~~v~~pvsgg~~~a~~G~~i~~gg~~~~~~~v~~ 161 (474)
....+ ++.. .++.|. ++++ -.+..+...+++.+..++.|+.+....... -+ ..+..+++
T Consensus 80 ~~h~~-~~~~---al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r--------------~~-p~~~~~~~ 140 (315)
T 3c1a_A 80 ATHAE-ITLA---AIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQL--------------FN-PAWEALKA 140 (315)
T ss_dssp GGHHH-HHHH---HHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGG--------------GC-HHHHHHHH
T ss_pred HHHHH-HHHH---HHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechh--------------cC-HHHHHHHH
Confidence 75443 3332 344565 5566 234456677777777777777654332211 11 23566777
Q ss_pred HHHHHhc
Q 011931 162 ILLKVAA 168 (474)
Q Consensus 162 ll~~lg~ 168 (474)
+++.+|.
T Consensus 141 ~i~~lG~ 147 (315)
T 3c1a_A 141 DLTSIGP 147 (315)
T ss_dssp THHHHCS
T ss_pred HHHHcCC
Confidence 7776664
No 185
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.37 E-value=6.7e-07 Score=92.74 Aligned_cols=97 Identities=10% Similarity=0.025 Sum_probs=74.7
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|+|||+|.||+.+|+.|...|.+|++||+++.+..+....+ +. ..+++++++. +|+|++++.+..-+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G-------~~-~~~l~ell~~---aDiVi~~~~t~~lI 346 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEG-------YR-VVTMEYAADK---ADIFVTATGNYHVI 346 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTT-------CE-ECCHHHHTTT---CSEEEECSSSSCSB
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcC-------CE-eCCHHHHHhc---CCEEEECCCccccc
Confidence 4799999999999999999999999999999988653333222 23 3478888887 99999998544222
Q ss_pred HHHHHHHHhcccCCCEEEecCCCCch-hHHHH
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEWYE-NTERR 118 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~ 118 (474)
. .+.+..+++|.+|||++..... +...+
T Consensus 347 ~---~~~l~~MK~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 347 N---HDHMKAMRHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp C---HHHHHHCCTTEEEEECSSSSCSBCCGGG
T ss_pred C---HHHHhhCCCCcEEEEcCCCcchhchHHH
Confidence 1 3556778999999999998763 55555
No 186
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.35 E-value=4.6e-07 Score=90.89 Aligned_cols=99 Identities=11% Similarity=0.079 Sum_probs=68.8
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCC-------C-Cc----------cccCCHHHHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGD-------L-PL----------FGFRDPESFV 68 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~-------~-~~----------~~~~s~~e~~ 68 (474)
..+|+|||+|.||..+++.+...|.+|++||+++++.+.+.+.+...-. . +. ....++++++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l 263 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAI 263 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHH
Confidence 3589999999999999999999999999999999998887764321000 0 00 0011344555
Q ss_pred hhcCCCcEEEEec--CCChhHHHH-HHHHHhcccCCCEEEecCC
Q 011931 69 NSIQKPRVIIMLV--KAGAPVDET-IKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 69 ~~l~~~dvIil~v--p~~~~v~~v-l~~l~~~l~~g~iiId~st 109 (474)
.. +|+||.++ |.... ..+ -++....+++|.+|||++.
T Consensus 264 ~~---aDIVI~tv~iPg~~a-p~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 264 TK---FDIVITTALVPGRPA-PRLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp TT---CSEEEECCCCTTSCC-CCCBCHHHHHTSCTTCEEEETTG
T ss_pred hc---CCEEEECCCCCCccc-ceeecHHHHhcCCCCcEEEEEeC
Confidence 54 99999986 32111 111 2566778899999999875
No 187
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.35 E-value=1.1e-06 Score=88.11 Aligned_cols=113 Identities=13% Similarity=0.141 Sum_probs=79.2
Q ss_pred cCcEEEEcccHhHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++||||||+|.||.. ++..|.+. +++|. ++|+++++.+++.+... ....+++++++++. .+.|+|++|+|+
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp~ 78 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFIS-----DIPVLDNVPAMLNQ-VPLDAVVMAGPP 78 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSC-----SCCEESSHHHHHHH-SCCSEEEECSCH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcC-----CCcccCCHHHHhcC-CCCCEEEEcCCc
Confidence 468999999999985 88988876 67776 88999999887765431 24578899999886 225999999998
Q ss_pred ChhHHHHHHHHHhcccCCCE-EEecC-CCCchhHHHHHHHHHHcCCeE
Q 011931 84 GAPVDETIKTLSAYMEKGDC-IIDGG-NEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~i-iId~s-t~~~~~~~~~~~~l~~~g~~~ 129 (474)
....+.+. ..+..|.- +++-- +......+++.+..++.|+.+
T Consensus 79 ~~H~~~~~----~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~ 122 (359)
T 3m2t_A 79 QLHFEMGL----LAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVS 122 (359)
T ss_dssp HHHHHHHH----HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHH----HHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEE
Confidence 75444333 23445654 44422 344456777777777666543
No 188
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.33 E-value=8e-07 Score=90.35 Aligned_cols=91 Identities=10% Similarity=0.043 Sum_probs=72.0
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......+ +. ..+++++++. +|+|+++..+...+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G-------~~-~~sL~eal~~---ADVVilt~gt~~iI 280 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEG-------YQ-VLLVEDVVEE---AHIFVTTTGNDDII 280 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE-ECCHHHHTTT---CSEEEECSSCSCSB
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhC-------Ce-ecCHHHHHhh---CCEEEECCCCcCcc
Confidence 4799999999999999999999999999999987765554433 22 3488999887 99999876654222
Q ss_pred HHHHHHHHhcccCCCEEEecCCCCc
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEWY 112 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~ 112 (474)
. .+.+..+++|.+||+++...+
T Consensus 281 ~---~e~l~~MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 281 T---SEHFPRMRDDAIVCNIGHFDT 302 (436)
T ss_dssp C---TTTGGGCCTTEEEEECSSSGG
T ss_pred C---HHHHhhcCCCcEEEEeCCCCC
Confidence 1 245677899999999998764
No 189
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.33 E-value=3.7e-06 Score=84.38 Aligned_cols=118 Identities=16% Similarity=0.124 Sum_probs=81.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
++||||||+|.||..++..|.+. ++++ .++|+++++.+.+.+..... .....+++++++++. ..+|+|++|+|+.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~--~~~~~~~~~~~ll~~-~~~D~V~i~tp~~ 82 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYP--ESTKIHGSYESLLED-PEIDALYVPLPTS 82 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCC--TTCEEESSHHHHHHC-TTCCEEEECCCGG
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC--CCCeeeCCHHHHhcC-CCCCEEEEcCChH
Confidence 46899999999999999999875 5666 58999999988877654200 013467889998863 2389999999987
Q ss_pred hhHHHHHHHHHhcccCCCEEE-ec-CCCCchhHHHHHHHHHHcCCeEEe
Q 011931 85 APVDETIKTLSAYMEKGDCII-DG-GNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiI-d~-st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
...+ ++. ..+..|..|+ +. .+......+++.+..++.|+.+..
T Consensus 83 ~h~~-~~~---~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~ 127 (362)
T 1ydw_A 83 LHVE-WAI---KAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMD 127 (362)
T ss_dssp GHHH-HHH---HHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEE
T ss_pred HHHH-HHH---HHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 5443 332 3355676444 42 234456667777777777876653
No 190
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.33 E-value=2e-06 Score=84.86 Aligned_cols=105 Identities=15% Similarity=0.145 Sum_probs=61.8
Q ss_pred CCCCCCcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCCC--CccccCCHHHHHhhcCCCcE
Q 011931 1 MVEGKQLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGDL--PLFGFRDPESFVNSIQKPRV 76 (474)
Q Consensus 1 m~~~~~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~~~~--~~~~~~s~~e~~~~l~~~dv 76 (474)
|.+.++++||+|||+|.+|.+++..|+..|+ +|.++|+++++++.......+...+ +++...+..+.++ .+|+
T Consensus 1 ~~m~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~---~aDv 77 (318)
T 1y6j_A 1 MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVK---DCDV 77 (318)
T ss_dssp ------CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGT---TCSE
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhC---CCCE
Confidence 3333445799999999999999999999998 9999999987765433222110000 1222222233344 4999
Q ss_pred EEEecCCChh---------------HHHHHHHHHhcccCCCEEEecCC
Q 011931 77 IIMLVKAGAP---------------VDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 77 Iil~vp~~~~---------------v~~vl~~l~~~l~~g~iiId~st 109 (474)
||++++.+.. ++++.+.+.+. .++.+|+..||
T Consensus 78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (318)
T 1y6j_A 78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSN 124 (318)
T ss_dssp EEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSS
T ss_pred EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 9999987531 34444566655 47788888655
No 191
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.32 E-value=4e-06 Score=83.61 Aligned_cols=115 Identities=13% Similarity=0.212 Sum_probs=79.9
Q ss_pred CCcCcEEEEcccHhHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011931 5 KQLTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~v 81 (474)
++|+||||||+|.||.. ++..+.+. +.+|. ++|+++++++++.++... ...++|++++++. +..|+|++|+
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~-----~~~y~d~~ell~~-~~iDaV~I~t 94 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSV-----PHAFGSYEEMLAS-DVIDAVYIPL 94 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTC-----SEEESSHHHHHHC-SSCSEEEECS
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCC-----CeeeCCHHHHhcC-CCCCEEEEeC
Confidence 45789999999999976 56666665 56765 889999999998876531 2468899999875 4479999999
Q ss_pred CCChhHHHHHHHHHhcccCCCEE-EecC-CCCchhHHHHHHHHHHcCCeE
Q 011931 82 KAGAPVDETIKTLSAYMEKGDCI-IDGG-NEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~ii-Id~s-t~~~~~~~~~~~~l~~~g~~~ 129 (474)
|+....+-++.. ++.|+-| +.-- +....+.+++.+..++.|+.+
T Consensus 95 P~~~H~~~~~~a----l~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l 140 (350)
T 4had_A 95 PTSQHIEWSIKA----ADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVV 140 (350)
T ss_dssp CGGGHHHHHHHH----HHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCE
T ss_pred CCchhHHHHHHH----HhcCCEEEEeCCcccchhhHHHHHHHHHHcCCce
Confidence 998665544433 3345544 4411 223456777777777766644
No 192
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.32 E-value=3.4e-06 Score=84.82 Aligned_cols=117 Identities=15% Similarity=0.156 Sum_probs=77.6
Q ss_pred CCCCCCcCcEEEEcccHhHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011931 1 MVEGKQLTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (474)
Q Consensus 1 m~~~~~~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvI 77 (474)
|.+..+++||||||+|.||.. .+..+.+. +++|. ++|++++++.+ ... ....+++++++++. ...|+|
T Consensus 1 M~~~~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~---~~~-----~~~~~~~~~~ll~~-~~~D~V 71 (364)
T 3e82_A 1 MSLSNNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR---DLP-----DVTVIASPEAAVQH-PDVDLV 71 (364)
T ss_dssp ------CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH---HCT-----TSEEESCHHHHHTC-TTCSEE
T ss_pred CCCCCCcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh---hCC-----CCcEECCHHHHhcC-CCCCEE
Confidence 444445679999999999997 66667665 67775 88999987642 211 25678899999873 238999
Q ss_pred EEecCCChhHHHHHHHHHhcccCCCEEEecC--CCCchhHHHHHHHHHHcCCeEE
Q 011931 78 IMLVKAGAPVDETIKTLSAYMEKGDCIIDGG--NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 78 il~vp~~~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~v 130 (474)
++|+|+....+.+.. .+..|+.|+.-- +......+++.+..++.|+.+.
T Consensus 72 ~i~tp~~~H~~~~~~----al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (364)
T 3e82_A 72 VIASPNATHAPLARL----ALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLS 122 (364)
T ss_dssp EECSCGGGHHHHHHH----HHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred EEeCChHHHHHHHHH----HHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 999999765554433 344666555533 3445667777777777776543
No 193
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.32 E-value=1.3e-06 Score=86.63 Aligned_cols=115 Identities=11% Similarity=0.119 Sum_probs=79.0
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~-~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+++||||||+|.||..++..|.+. +++|. ++|+++++.+++.+.. ++ ..+++++++++. ..+|+|++|+|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~------~~~~~~~~~~~ll~~-~~~D~V~i~tp 76 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKY------HLPKAYDKLEDMLAD-ESIDVIYVATI 76 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CC------CCSCEESCHHHHHTC-TTCCEEEECSC
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHc------CCCcccCCHHHHhcC-CCCCEEEECCC
Confidence 356899999999999999999876 45554 8899999887776643 23 367899999872 23899999999
Q ss_pred CChhHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEEe
Q 011931 83 AGAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
+....+.+.. .+..|. ++++-- +......+++.+..++.|+.+..
T Consensus 77 ~~~h~~~~~~----al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 123 (329)
T 3evn_A 77 NQDHYKVAKA----ALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLME 123 (329)
T ss_dssp GGGHHHHHHH----HHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cHHHHHHHHH----HHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 9755444332 344555 445432 44556777777777777775543
No 194
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.31 E-value=7.7e-07 Score=89.97 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=69.8
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCc---------c-c------------cCCH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPL---------F-G------------FRDP 64 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~---------~-~------------~~s~ 64 (474)
..+|+|||+|.||..+++.+...|.+|++||+++++.+.+.+.+...-...+ . . ..++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 3589999999999999999999999999999999988877664421000000 0 0 1245
Q ss_pred HHHHhhcCCCcEEEEec--CCChhHHHHHHHHHhcccCCCEEEecCC
Q 011931 65 ESFVNSIQKPRVIIMLV--KAGAPVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 65 ~e~~~~l~~~dvIil~v--p~~~~v~~vl~~l~~~l~~g~iiId~st 109 (474)
++++.. +|+||.++ |....-.-+-++....+++|.+|||++.
T Consensus 270 ~e~l~~---aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 270 AEHIAK---QDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHT---CSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred HHHhcC---CCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 566666 99999986 3211101112567778999999999985
No 195
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.30 E-value=1e-06 Score=91.97 Aligned_cols=108 Identities=8% Similarity=0.109 Sum_probs=79.2
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH---HhCCCcchhhhHHHHHHHHhhCCCCCCC
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARI---WKGGCIIRAVFLDRIKKAYDRNADLANL 386 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~i---W~~gcii~s~ll~~~~~~~~~~~~l~~l 386 (474)
+.+.++++|++||++.+++++.++|++.++++. .+++..++.++ |+.|. ..|++++.....+.+++.-...
T Consensus 175 ~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~-----~G~~~~~~~~~~~~w~~g~-~~S~l~~~~~~~l~~~d~~~~~ 248 (482)
T 2pgd_A 175 DDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDV-----LGLGHKEMAKAFEEWNKTE-LDSFLIEITASILKFQDADGKH 248 (482)
T ss_dssp ETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHTTTT-TCBHHHHHHHHHHHCBCTTSSB
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcCHHHHHHHHHHhcCCC-cCchHHHHHhHHhhccCCCCCe
Confidence 457889999999999999999999999998863 13666655544 88883 6899999877766654321223
Q ss_pred ccChHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH
Q 011931 387 LVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA 425 (474)
Q Consensus 387 l~~~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~ 425 (474)
.++...+...+++++ +|+++.|.++|+|+|.+.+++.
T Consensus 249 ~ld~i~d~~~~k~t~--~~~~~~A~~~Gv~~P~i~~av~ 285 (482)
T 2pgd_A 249 LLPKIRDSAGQKGTG--KWTAISALEYGVPVTLIGEAVF 285 (482)
T ss_dssp SGGGSCCCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHH
T ss_pred eecccccccccccHH--HHHHHHHHHcCCCcchHHHHHH
Confidence 333333333335555 9999999999999999987664
No 196
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.30 E-value=4.1e-06 Score=84.92 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=82.3
Q ss_pred cCcEEEEccc-HhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLA-VMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG-~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++||||||+| .||..++..|.+. +++|. ++|+++++.+++.+.. ++..+++++++++. .+.|+|++++|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------g~~~~~~~~ell~~-~~vD~V~i~tp~ 74 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY------GIPVFATLAEMMQH-VQMDAVYIASPH 74 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH------TCCEESSHHHHHHH-SCCSEEEECSCG
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc------CCCeECCHHHHHcC-CCCCEEEEcCCc
Confidence 4689999999 9999999999875 56665 8899999988887654 25678899999875 348999999999
Q ss_pred ChhHHHHHHHHHhcccCCCEE-EecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPVDETIKTLSAYMEKGDCI-IDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~ii-Id~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
....+.+.. .+..|..| ++-- +......+++.+..+++|+.+.
T Consensus 75 ~~H~~~~~~----al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 119 (387)
T 3moi_A 75 QFHCEHVVQ----ASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLV 119 (387)
T ss_dssp GGHHHHHHH----HHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHH----HHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEE
Confidence 765544332 33455544 4422 3345667777777777776554
No 197
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.29 E-value=7.8e-07 Score=92.76 Aligned_cols=108 Identities=17% Similarity=0.223 Sum_probs=81.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHH---HHHHhCCCcchhhhHHHHHHHHhhCCCCCCC
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGEL---ARIWKGGCIIRAVFLDRIKKAYDRNADLANL 386 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i---~~iW~~gcii~s~ll~~~~~~~~~~~~l~~l 386 (474)
+.++++++|+++|++.++.|+.++|++.+++++. + +|..++ +..|++| .+.|++++...+.+++++.-...
T Consensus 187 ~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~l---G--l~~~~~~~l~~~w~~g-~~~s~l~~~~~~~l~~~d~~~~~ 260 (480)
T 2zyd_A 187 ADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGL---N--LTNEELAQTFTEWNNG-ELSSYLIDITKDIFTKKDEDGNY 260 (480)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C--CCHHHHHHHHHHHHHT-TTCBHHHHHHHHHHHCBCTTSSB
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCHHHHHHHHHHhcCC-CcccHHHHHHHHHHhcCCCCCcc
Confidence 4588999999999999999999999999988731 3 666554 4568988 46899999988887653321123
Q ss_pred ccChHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH
Q 011931 387 LVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA 425 (474)
Q Consensus 387 l~~~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~ 425 (474)
.++...+...+++++ +|+++.|.++|+|+|.+.+++.
T Consensus 261 ~v~~i~D~~~~k~tG--~~~~~~A~~~gv~~Pi~~~av~ 297 (480)
T 2zyd_A 261 LVDVILDEAANKGTG--KWTSQSALDLGEPLSLITESVF 297 (480)
T ss_dssp GGGGBCCCCCCCSCT--THHHHHHHHHTCCCHHHHHHHH
T ss_pred hHHHHHHHhcCchHH--HHHHHHHHHcCCCCchHHHHHH
Confidence 333333333456677 9999999999999999999974
No 198
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.29 E-value=2.3e-06 Score=86.14 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=82.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
+|||.|||+|.+|+.++..|++ .++|.+.|++.++++++.+.... +.. ..+.+++.+.++++|+||.|+|+.
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~-----~~~d~~d~~~l~~~~~~~DvVi~~~p~~- 88 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATP-----LKVDASNFDKLVEVMKEFELVIGALPGF- 88 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEE-----EECCTTCHHHHHHHHTTCSEEEECCCGG-
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCc-----EEEecCCHHHHHHHHhCCCEEEEecCCc-
Confidence 3689999999999999998875 58999999999988876543211 111 234444444445599999999986
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe-cCCCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG-MGVSGG 137 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~-~pvsgg 137 (474)
.-..+++. .++.|..++|.|-.. ....++.+..++.|+.++. +++..|
T Consensus 89 ~~~~v~~~---~~~~g~~yvD~s~~~-~~~~~l~~~a~~~g~~~i~~~G~~PG 137 (365)
T 3abi_A 89 LGFKSIKA---AIKSKVDMVDVSFMP-ENPLELRDEAEKAQVTIVFDAGFAPG 137 (365)
T ss_dssp GHHHHHHH---HHHHTCEEEECCCCS-SCGGGGHHHHHHTTCEEECCCBTTTB
T ss_pred ccchHHHH---HHhcCcceEeeeccc-hhhhhhhhhhccCCceeeecCCCCCc
Confidence 33444443 345788999988554 3455666667777876663 454433
No 199
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.27 E-value=1.5e-06 Score=87.04 Aligned_cols=110 Identities=15% Similarity=0.215 Sum_probs=75.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
-++|+|+|+|+||..+|+.|.+.|++|+++|+++++++++.+... .... +.+++.. ..||+++.|.... .
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g------a~~v-~~~~ll~--~~~DIvip~a~~~-~ 242 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG------ADAV-APNAIYG--VTCDIFAPCALGA-V 242 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC------CEEC-CGGGTTT--CCCSEEEECSCSC-C
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC------CEEE-ChHHHhc--cCCcEeeccchHH-H
Confidence 357999999999999999999999999999999998887776531 2222 3344433 1399999886543 2
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
+.. ..++.+ ...+|++.++.. .+..+..+.+.++|+.|+.
T Consensus 243 I~~---~~~~~l-g~~iV~e~An~p-~t~~ea~~~L~~~Gi~~~P 282 (364)
T 1leh_A 243 LND---FTIPQL-KAKVIAGSADNQ-LKDPRHGKYLHELGIVYAP 282 (364)
T ss_dssp BST---THHHHC-CCSEECCSCSCC-BSSHHHHHHHHHHTCEECC
T ss_pred hCH---HHHHhC-CCcEEEeCCCCC-cccHHHHHHHHhCCCEEec
Confidence 211 122334 346676676664 3444566778888886654
No 200
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.26 E-value=3.7e-06 Score=86.54 Aligned_cols=119 Identities=8% Similarity=0.097 Sum_probs=80.8
Q ss_pred cCcEEEEcccHhHH-HHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQ-NLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~-~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++||||||+|.||. .++..|.+. +++| .++|+++++.+++.+..... ..++..+++++++++. .++|+|++|+|+
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~-~~~~~~~~~~~~ll~~-~~vD~V~iatp~ 160 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVD-PRKIYDYSNFDKIAKD-PKIDAVYIILPN 160 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCC-GGGEECSSSGGGGGGC-TTCCEEEECSCG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC-cccccccCCHHHHhcC-CCCCEEEEcCCc
Confidence 46899999999997 899998875 5665 58999999988877653210 0002257788998862 238999999999
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEe
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
....+.+.. .++.|. ++++. .+......+++.+..++.|+.+..
T Consensus 161 ~~h~~~~~~----al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v 206 (433)
T 1h6d_A 161 SLHAEFAIR----AFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMI 206 (433)
T ss_dssp GGHHHHHHH----HHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred hhHHHHHHH----HHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 755444333 344566 55553 344456677777777777776543
No 201
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.26 E-value=1.2e-06 Score=88.34 Aligned_cols=120 Identities=13% Similarity=0.225 Sum_probs=79.7
Q ss_pred CCCCCCcCcEEEEcccHhHHHHHHHHHHC--CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011931 1 MVEGKQLTRIGLAGLAVMGQNLALNIAEK--GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (474)
Q Consensus 1 m~~~~~~~~IgiIGlG~mG~~lA~~L~~~--G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvI 77 (474)
|-......||+|||+| +|...+..+.+. ++++. ++|+++++.+++.++. ++..++|.+++.+. .|++
T Consensus 1 M~~~~~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~------gv~~~~~~~~l~~~---~D~v 70 (372)
T 4gmf_A 1 MPSASPKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF------GIPLYTSPEQITGM---PDIA 70 (372)
T ss_dssp ------CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT------TCCEESSGGGCCSC---CSEE
T ss_pred CCCCCCCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh------CCCEECCHHHHhcC---CCEE
Confidence 4445556789999999 899888888765 56766 8899999999988765 36678899999876 9999
Q ss_pred EEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011931 78 IMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 78 il~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v 130 (474)
++++|+......-.+-....|..|.-|+.-=...+.+.+++.+..+++|+.|.
T Consensus 71 ~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~ 123 (372)
T 4gmf_A 71 CIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYW 123 (372)
T ss_dssp EECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEE
T ss_pred EEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEE
Confidence 99999864421111112233456665554333455677777777777777654
No 202
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.24 E-value=1.7e-06 Score=75.23 Aligned_cols=104 Identities=15% Similarity=0.130 Sum_probs=76.6
Q ss_pred CcEEEEcc----cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 8 TRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
.+|+|||+ |.+|..++.+|.+.||+ +|++++.. +++ . ++..+.+++|+... +|++++++|+
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~i----~-----G~~~y~sl~~l~~~---vDlvvi~vp~ 87 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EEV----L-----GRKCYPSVLDIPDK---IEVVDLFVKP 87 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SEE----T-----TEECBSSGGGCSSC---CSEEEECSCH
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-CeE----C-----CeeccCCHHHcCCC---CCEEEEEeCH
Confidence 46999999 79999999999999997 56666653 111 1 36678889988776 9999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM 132 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~ 132 (474)
..+.++++++...- .+.+++..++. .+++.+.++++|+++++.
T Consensus 88 -~~~~~vv~~~~~~g-i~~i~~~~g~~----~~~l~~~a~~~Gi~vvGp 130 (144)
T 2d59_A 88 -KLTMEYVEQAIKKG-AKVVWFQYNTY----NREASKKADEAGLIIVAN 130 (144)
T ss_dssp -HHHHHHHHHHHHHT-CSEEEECTTCC----CHHHHHHHHHTTCEEEES
T ss_pred -HHHHHHHHHHHHcC-CCEEEECCCch----HHHHHHHHHHcCCEEEcC
Confidence 47788887776543 34455543332 456777778889998863
No 203
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.23 E-value=6.7e-06 Score=81.16 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=66.9
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~----~-~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
+++||+|||+|.||.++|..|+..|+ +|.++|+++++++.......+ . ...++..+++. +.++. +|+||+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~---aDiVIi 81 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEG---ADVVIV 81 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTT---CSEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCC---CCEEEE
Confidence 45799999999999999999999999 999999999876532211100 0 00124444555 44454 999999
Q ss_pred ecCCCh---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+...+. .++++...+... .++.+++..||-
T Consensus 82 aag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvtNP 126 (324)
T 3gvi_A 82 TAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICITNP 126 (324)
T ss_dssp CCSCCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred ccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEecCCC
Confidence 975432 123333445444 477888888874
No 204
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.22 E-value=6.9e-06 Score=80.92 Aligned_cols=101 Identities=11% Similarity=0.117 Sum_probs=64.6
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCC-C--CccccCCHHHHHhhcCCCcEEEE
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGD-L--PLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~~~-~--~~~~~~s~~e~~~~l~~~dvIil 79 (474)
++++||+|||+|.||.++|..|+..|. +|.++|+++++.+.......+... . +.+...+..+.++. +|+||+
T Consensus 4 ~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~---aDvVii 80 (316)
T 1ldn_A 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRD---ADLVVI 80 (316)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTT---CSEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCC---CCEEEE
Confidence 355799999999999999999998875 899999998766543222111000 0 11222233344444 999999
Q ss_pred ecCCCh---------------hHHHHHHHHHhcccCCCEEEecCC
Q 011931 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 109 (474)
+++.+. .+.++...+.+.. +..+++..||
T Consensus 81 a~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tN 124 (316)
T 1ldn_A 81 CAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATN 124 (316)
T ss_dssp CCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSS
T ss_pred cCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCC
Confidence 987653 1233444555544 6677777777
No 205
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.22 E-value=6.5e-06 Score=80.17 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=66.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHH----HHhhhhc-CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDET----VERAKKE-GDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l----~~~~~~~-~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
|||+|||+|.||.++|..|+.+|+ +|.+||+++++++.. ....... ...++..+++ .+.++. +|+||++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~---aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG---SEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT---CSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC---CCEEEEC
Confidence 689999999999999999999998 999999999887522 1111000 0012344455 555555 9999999
Q ss_pred cCCCh---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.+.+. .++++...+... .|+.+|+..||-
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNP 120 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNP 120 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCc
Confidence 85542 122333445544 578888888863
No 206
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.21 E-value=1.6e-06 Score=84.02 Aligned_cols=114 Identities=18% Similarity=0.074 Sum_probs=78.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.+++.|+|+|.||++++..|++.|. +|+++||++++.+++.+.....+ .+. ..+++++... +|+||.++|.+.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~~~-~~~~~~l~~~---aDiIInaTp~gm 199 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--EVK-AQAFEQLKQS---YDVIINSTSASL 199 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--CEE-EEEGGGCCSC---EEEEEECSCCCC
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--Cee-EeeHHHhcCC---CCEEEEcCcCCC
Confidence 3579999999999999999999996 99999999999988887653210 112 2244444344 999999999874
Q ss_pred hHHHH-HHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe-EE
Q 011931 86 PVDET-IKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL-YL 130 (474)
Q Consensus 86 ~v~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~-~v 130 (474)
..+.. +. ...+.++.+|+|+...+ ..|. +.+..+++|.. .+
T Consensus 200 ~~~~~~l~--~~~l~~~~~V~DlvY~P-~~T~-ll~~A~~~G~~~~~ 242 (281)
T 3o8q_A 200 DGELPAID--PVIFSSRSVCYDMMYGK-GYTV-FNQWARQHGCAQAI 242 (281)
T ss_dssp ----CSCC--GGGEEEEEEEEESCCCS-SCCH-HHHHHHHTTCSEEE
T ss_pred CCCCCCCC--HHHhCcCCEEEEecCCC-ccCH-HHHHHHHCCCCEEE
Confidence 32211 11 23467889999998764 4443 44566777775 44
No 207
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.20 E-value=4.3e-06 Score=86.96 Aligned_cols=91 Identities=10% Similarity=0.061 Sum_probs=73.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|+|||+|.||..+|+.+...|++|+++|+++.+.+...+.+ +. ..++++++.. +|+||.+++....+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G-------a~-~~~l~e~l~~---aDvVi~atgt~~~i 343 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG-------FD-VVTVEEAIGD---ADIVVTATGNKDII 343 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE-ECCHHHHGGG---CSEEEECSSSSCSB
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------CE-EecHHHHHhC---CCEEEECCCCHHHH
Confidence 5799999999999999999999999999999999877665543 23 3467787776 99999999876433
Q ss_pred HHHHHHHHhcccCCCEEEecCCCCc
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEWY 112 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~ 112 (474)
. .+.++.+++|.+|++.+....
T Consensus 344 ~---~~~l~~mk~ggilvnvG~~~~ 365 (494)
T 3ce6_A 344 M---LEHIKAMKDHAILGNIGHFDN 365 (494)
T ss_dssp C---HHHHHHSCTTCEEEECSSSGG
T ss_pred H---HHHHHhcCCCcEEEEeCCCCC
Confidence 2 245566889999999998653
No 208
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.20 E-value=1.2e-05 Score=79.90 Aligned_cols=114 Identities=16% Similarity=0.098 Sum_probs=80.2
Q ss_pred CcCcEEEEccc-HhHHHHHHHHHHC--CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011931 6 QLTRIGLAGLA-VMGQNLALNIAEK--GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 6 ~~~~IgiIGlG-~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~v 81 (474)
++.||||||+| .||...+..|.+. +++| .++|+++++.+++.+.... ...+++++++++. ...|+|++|+
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~-----~~~~~~~~~ll~~-~~vD~V~i~t 90 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN-----PAVFDSYEELLES-GLVDAVDLTL 90 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS-----CEEESCHHHHHHS-SCCSEEEECC
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCC-----CcccCCHHHHhcC-CCCCEEEEeC
Confidence 34689999999 8999999999876 4666 5899999999888776421 2568899999874 3489999999
Q ss_pred CCChhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeE
Q 011931 82 KAGAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~ 129 (474)
|+....+-+.. .++.|. +++.- -+....+.+++.+..++.|+.+
T Consensus 91 p~~~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 136 (340)
T 1zh8_A 91 PVELNLPFIEK----ALRKGVHVICEKPISTDVETGKKVVELSEKSEKTV 136 (340)
T ss_dssp CGGGHHHHHHH----HHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCE
T ss_pred CchHHHHHHHH----HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 98755443333 344555 44542 1234456667777777766644
No 209
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.19 E-value=2.4e-06 Score=85.18 Aligned_cols=113 Identities=9% Similarity=0.158 Sum_probs=76.4
Q ss_pred cCcEEEEcccHhHHHHHHH-H-HH-CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGLAVMGQNLALN-I-AE-KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~-L-~~-~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
++||||||+|.||..+... + .. .+++|. ++|+++++.+...+.. ++..+++++++++. .+.|+|++|+|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~------~~~~~~~~~~ll~~-~~~D~V~i~tp 74 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYS------HIHFTSDLDEVLND-PDVKLVVVCTH 74 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGT------TCEEESCTHHHHTC-TTEEEEEECSC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcC------CCceECCHHHHhcC-CCCCEEEEcCC
Confidence 5689999999999975444 4 32 367776 8999987763322211 35678899999874 34799999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecC--CCCchhHHHHHHHHHHcCCeEE
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGG--NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~v 130 (474)
+....+.+. ..+..|..|+.-- +......+++.+..++.|+.+.
T Consensus 75 ~~~h~~~~~----~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 120 (345)
T 3f4l_A 75 ADSHFEYAK----RALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVT 120 (345)
T ss_dssp GGGHHHHHH----HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHH----HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 976555443 3345676666533 3445667777777777776553
No 210
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.19 E-value=9.8e-06 Score=79.86 Aligned_cols=100 Identities=13% Similarity=0.136 Sum_probs=65.0
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhh---cCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKK---EGDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~---~~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
+++||+|||+|.+|.+++..|+..|. +|.++|+++++++.......+ ..+.++....+..+.++. +|+||++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~---aDvVvi~ 81 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHD---ADLVVIC 81 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTT---CSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCC---CCEEEEC
Confidence 44799999999999999999998885 899999998776643221110 000012222233444454 9999999
Q ss_pred cCCCh---------------hHHHHHHHHHhcccCCCEEEecCC
Q 011931 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 109 (474)
++.+. .++++.+.+.+. .++.+|+..||
T Consensus 82 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (317)
T 3d0o_A 82 AGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATN 124 (317)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 97652 123333455554 57788888765
No 211
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.18 E-value=3.2e-06 Score=82.87 Aligned_cols=106 Identities=18% Similarity=0.216 Sum_probs=64.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
++||||||+|.||..++..|.+. +++|. ++|+++++++. .+. .....+++.+. .++|+|++|+|+.
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~-----~~~~~~~l~~~----~~~DvViiatp~~ 76 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQ-----PFRVVSDIEQL----ESVDVALVCSPSR 76 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCT-----TSCEESSGGGS----SSCCEEEECSCHH
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCC-----CcCCHHHHHhC----CCCCEEEECCCch
Confidence 46899999999999999999874 67877 79999887654 111 11123344333 3499999999986
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC---CchhHHHHHHHHHHcCCe
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE---WYENTERREKAMAELGLL 128 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~---~~~~~~~~~~~l~~~g~~ 128 (474)
...+ .+ ...++.|..|++.... .+....++.+..++.|..
T Consensus 77 ~h~~-~~---~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~ 119 (304)
T 3bio_A 77 EVER-TA---LEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAA 119 (304)
T ss_dssp HHHH-HH---HHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCE
T ss_pred hhHH-HH---HHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCE
Confidence 4433 22 3445678888886543 223345555666666654
No 212
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.17 E-value=1.1e-05 Score=84.13 Aligned_cols=114 Identities=21% Similarity=0.249 Sum_probs=82.1
Q ss_pred CcEEEEcc----cHhHHHHHHHHHHC--CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 8 TRIGLAGL----AVMGQNLALNIAEK--GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 8 ~~IgiIGl----G~mG~~lA~~L~~~--G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
+||||||+ |.||...+..|.+. +++|+ ++|+++++.+++.+..... ....+++++++++. ...|+|++|
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~---~~~~~~d~~ell~~-~~vD~V~I~ 115 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLK---HATGFDSLESFAQY-KDIDMIVVS 115 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCT---TCEEESCHHHHHHC-TTCSEEEEC
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCC---cceeeCCHHHHhcC-CCCCEEEEc
Confidence 58999999 99999999999886 67764 8999999998887754210 12468899999863 238999999
Q ss_pred cCCChhHHHHHHHHHhcccCC-------CEEEec-CCCCchhHHHHHHHHHHcC-CeE
Q 011931 81 VKAGAPVDETIKTLSAYMEKG-------DCIIDG-GNEWYENTERREKAMAELG-LLY 129 (474)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g-------~iiId~-st~~~~~~~~~~~~l~~~g-~~~ 129 (474)
+|+....+.++.. +..| .++++. -+....+.+++.+..++.| +.+
T Consensus 116 tp~~~H~~~~~~a----l~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 169 (479)
T 2nvw_A 116 VKVPEHYEVVKNI----LEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQT 169 (479)
T ss_dssp SCHHHHHHHHHHH----HHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEE
T ss_pred CCcHHHHHHHHHH----HHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 9987555444433 3345 477775 3445567777777777777 544
No 213
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.17 E-value=1.3e-05 Score=80.42 Aligned_cols=111 Identities=13% Similarity=0.168 Sum_probs=78.2
Q ss_pred CcEEEEcccHhHH-HHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 8 TRIGLAGLAVMGQ-NLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGlG~mG~-~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
+||||||+|.+|. .++..+...+++|. ++|+++++.+++.+... ....+++++++++. .+.|+|++|+|+..
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~-----~~~~~~~~~~ll~~-~~vD~V~I~tp~~~ 100 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYA-----DARRIATAEEILED-ENIGLIVSAAVSSE 100 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSS-----SCCEESCHHHHHTC-TTCCEEEECCCHHH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcC-----CCcccCCHHHHhcC-CCCCEEEEeCChHH
Confidence 5899999999995 57777777888865 88999999998887642 14578899999874 34799999999875
Q ss_pred hHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCe
Q 011931 86 PVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLL 128 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~ 128 (474)
..+.+.. .+..|. +++.-- +......+++.+..++.|+.
T Consensus 101 H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 141 (361)
T 3u3x_A 101 RAELAIR----AMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRI 141 (361)
T ss_dssp HHHHHHH----HHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHH----HHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE
Confidence 5443333 344555 444422 33345666777766666654
No 214
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.17 E-value=1.9e-06 Score=83.15 Aligned_cols=117 Identities=21% Similarity=0.150 Sum_probs=76.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++|.|+|+|.||++++..|++.|.+|+++||++++.+++.+.....+ .+. ..+.+++.+ ..+|+||.++|.+..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~--~~~-~~~~~~~~~--~~~DivIn~t~~~~~ 193 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQ-AVSMDSIPL--QTYDLVINATSAGLS 193 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEE-EEEGGGCCC--SCCSEEEECCCC---
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC--CeE-EeeHHHhcc--CCCCEEEECCCCCCC
Confidence 357999999999999999999999999999999999988876542100 111 122333222 149999999998643
Q ss_pred HHHHHHHH-HhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe-EEe
Q 011931 87 VDETIKTL-SAYMEKGDCIIDGGNEWYENTERREKAMAELGLL-YLG 131 (474)
Q Consensus 87 v~~vl~~l-~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~-~v~ 131 (474)
..+. .+ ...+.++.+++|.+.....++. +.+..+++|.. +++
T Consensus 194 -~~~~-~i~~~~l~~~~~v~D~~y~p~~~t~-ll~~a~~~G~~~~v~ 237 (272)
T 1p77_A 194 -GGTA-SVDAEILKLGSAFYDMQYAKGTDTP-FIALCKSLGLTNVSD 237 (272)
T ss_dssp ------CCCHHHHHHCSCEEESCCCTTSCCH-HHHHHHHTTCCCEEC
T ss_pred -CCCC-CCCHHHcCCCCEEEEeeCCCCcCCH-HHHHHHHcCCCEeeC
Confidence 1110 11 1124568899999986544243 44556677775 553
No 215
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.16 E-value=4.5e-06 Score=81.69 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=63.9
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHH---HHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSK---VDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~---~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
..++||+|||+|.||..+|..|+.+|+ +|.++|++++. ..++..... .+++.+.+++ .++. ||+||+
T Consensus 12 ~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~----~~i~~t~d~~-~l~~---aD~Vi~ 83 (303)
T 2i6t_A 12 KTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNL----PNVEISKDLS-ASAH---SKVVIF 83 (303)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTC----TTEEEESCGG-GGTT---CSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcC----CCeEEeCCHH-HHCC---CCEEEE
Confidence 346799999999999999999999999 99999999852 222222111 1355556663 3444 999999
Q ss_pred ecCCCh--------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGA--------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~--------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++..+. .+.+++..+.+.. +..+++..||.
T Consensus 84 aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP 127 (303)
T 2i6t_A 84 TVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQP 127 (303)
T ss_dssp CCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCCh
Confidence 973321 1344555666654 78888888884
No 216
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.14 E-value=8.9e-06 Score=81.92 Aligned_cols=88 Identities=18% Similarity=0.289 Sum_probs=70.2
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChH------HHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS------KVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~------~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~v 81 (474)
++|+|||.|+.|.+-|+||.+.|.+|++--|... ..+.+.+.+ +++ .+.+|+++. +|+|++.+
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~G-------f~v-~~~~eA~~~---ADvV~~L~ 106 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENG-------FKV-GTYEELIPQ---ADLVINLT 106 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTT-------CEE-EEHHHHGGG---CSEEEECS
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCC-------CEe-cCHHHHHHh---CCEEEEeC
Confidence 5799999999999999999999999999887432 222333322 443 478999998 99999999
Q ss_pred CCChhHHHHHHHHHhcccCCCEEEec
Q 011931 82 KAGAPVDETIKTLSAYMEKGDCIIDG 107 (474)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~ 107 (474)
|+. .-..+.+.+.|+|++|+++.-.
T Consensus 107 PD~-~q~~vy~~I~p~lk~G~~L~fa 131 (491)
T 3ulk_A 107 PDK-QHSDVVRTVQPLMKDGAALGYS 131 (491)
T ss_dssp CGG-GHHHHHHHHGGGSCTTCEEEES
T ss_pred Chh-hHHHHHHHHHhhCCCCCEEEec
Confidence 986 5566778899999999988753
No 217
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.14 E-value=1.6e-05 Score=79.31 Aligned_cols=111 Identities=17% Similarity=0.234 Sum_probs=77.9
Q ss_pred cCcEEEEcccHhHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++||||||+|.||.. .+..+.+. +++|. ++|+++++.+ +... +...+++++++++. .+.|+|++|+|+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~---~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp~ 77 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH---ADWP-----AIPVVSDPQMLFND-PSIDLIVIPTPN 77 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---TTCS-----SCCEESCHHHHHHC-SSCCEEEECSCT
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH---hhCC-----CCceECCHHHHhcC-CCCCEEEEeCCh
Confidence 358999999999997 77777765 67765 8899998765 1111 35678899999874 448999999999
Q ss_pred ChhHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
....+.+.. .++.|. ++++.- +......+++.+..++.|+.+.
T Consensus 78 ~~H~~~~~~----al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (352)
T 3kux_A 78 DTHFPLAQS----ALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLS 122 (352)
T ss_dssp TTHHHHHHH----HHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHH----HHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 866554433 344565 555543 4455667777777777776543
No 218
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.12 E-value=4.4e-06 Score=87.04 Aligned_cols=107 Identities=14% Similarity=0.185 Sum_probs=78.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHH---HHHh-CCCcchhhhHHHHHHHHhhCCCCCC
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA---RIWK-GGCIIRAVFLDRIKKAYDRNADLAN 385 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~---~iW~-~gcii~s~ll~~~~~~~~~~~~l~~ 385 (474)
+.+.++++|+++|++.+.+++.++|.+.++++. + ++.+++. ..|+ .| ...|++++.....+++.+.-..
T Consensus 177 ~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~----G--~~~~~~~~l~~~w~~~g-~~~s~l~~~~~~~l~~~d~~G~ 249 (478)
T 1pgj_A 177 SGGAGSCVKMYHNSGEYAILQIWGEVFDILRAM----G--LNNDEVAAVLEDWKSKN-FLKSYMLDISIAAARAKDKDGS 249 (478)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----T--CCHHHHHHHHHHHHHTS-TTCBHHHHHHHHHHHCBCTTSS
T ss_pred CchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHc----C--CCHHHHHHHHHHhccCC-CcCchHHHhhchhhhcCCCCCh
Confidence 457889999999999999999999999998853 3 6665544 4577 77 5789999988777754321111
Q ss_pred CccChHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHH
Q 011931 386 LLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLA 425 (474)
Q Consensus 386 ll~~~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~ 425 (474)
..+|...+...+++++ +|+++.|.++|+|+|.+.+++.
T Consensus 250 ~~ld~i~D~~~~kgtg--~~~~~~A~~~Gv~~Pi~~~av~ 287 (478)
T 1pgj_A 250 YLTEHVMDRIGSKGTG--LWSAQEALEIGVPAPSLNMAVV 287 (478)
T ss_dssp BGGGGBCCCCCCCSHH--HHHHHHHHHHTCCCHHHHHHHH
T ss_pred hHHHHHHHHhcCccHH--HHHHHHHHHhCCCChHHHHHHH
Confidence 2333222222234445 9999999999999999999985
No 219
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.12 E-value=1.7e-05 Score=81.88 Aligned_cols=119 Identities=18% Similarity=0.189 Sum_probs=80.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccC----CHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFR----DPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~----s~~e~~~~l~~~dvIil~ 80 (474)
++||||||+|.||...+..|.+. +++| .++|+++++++++.+.....+......++ +++++++. ...|+|++|
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~-~~vD~V~i~ 98 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKD-KNIDAVFVS 98 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTC-TTCCEEEEC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcC-CCCCEEEEc
Confidence 45899999999999999999875 6776 48899999988876532110000134566 89998863 238999999
Q ss_pred cCCChhHHHHHHHHHhcccCCCE-EEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011931 81 VKAGAPVDETIKTLSAYMEKGDC-IIDG-GNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~i-iId~-st~~~~~~~~~~~~l~~~g~~~v 130 (474)
+|+....+.++. .++.|+. +++- -+....+.+++.+..++.|+.+.
T Consensus 99 tp~~~h~~~~~~----al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 99 SPWEWHHEHGVA----AMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp CCGGGHHHHHHH----HHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred CCcHHHHHHHHH----HHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 998765554433 3445664 4442 23344666777777777776543
No 220
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.12 E-value=1.7e-05 Score=78.19 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=65.9
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhc-----CCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKE-----GDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~-----~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
.++||+|||+|.||.++|..|+..|+ +|.++|+++++++.......+. ...++..+.+. +.++. +|+||+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~-~a~~~---aDvVIi 79 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDY-KDLEN---SDVVIV 79 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT---CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCH-HHHCC---CCEEEE
Confidence 35799999999999999999999988 9999999998765333221110 00123334444 44444 999999
Q ss_pred ecCCCh---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+.+. .++++...+.... |+.+++..||-
T Consensus 80 ~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNP 124 (321)
T 3p7m_A 80 TAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNP 124 (321)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred cCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCc
Confidence 975431 1233334555544 77788888763
No 221
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.11 E-value=1.9e-05 Score=81.74 Aligned_cols=74 Identities=15% Similarity=0.255 Sum_probs=53.7
Q ss_pred cCcEEEEcccHh--HHHHHHHHHHC----CCcEEEEeCChHHHHHHHHhhh----hc-CCCCccccCCHHHHHhhcCCCc
Q 011931 7 LTRIGLAGLAVM--GQNLALNIAEK----GFPISVYNRTTSKVDETVERAK----KE-GDLPLFGFRDPESFVNSIQKPR 75 (474)
Q Consensus 7 ~~~IgiIGlG~m--G~~lA~~L~~~----G~~V~v~dr~~~~~~~l~~~~~----~~-~~~~~~~~~s~~e~~~~l~~~d 75 (474)
++||+|||+|.| |.++|..|+.. |++|.+||+++++++....... .. ...+++.+++++++++. ||
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~d---AD 79 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIID---AD 79 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT---CS
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCC---CC
Confidence 469999999997 46667788754 8999999999988765433211 00 01145666788777777 99
Q ss_pred EEEEecCC
Q 011931 76 VIIMLVKA 83 (474)
Q Consensus 76 vIil~vp~ 83 (474)
+||+++|.
T Consensus 80 ~VIiaagv 87 (480)
T 1obb_A 80 FVINTAMV 87 (480)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99999975
No 222
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.11 E-value=2.1e-05 Score=79.17 Aligned_cols=112 Identities=15% Similarity=0.140 Sum_probs=75.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHC--------CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE
Q 011931 8 TRIGLAGLAVMGQNLALNIAEK--------GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII 78 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~--------G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi 78 (474)
-||||||+|.||..-+..+... +.+|+ ++|+++++++++.++... ...+++.+++++. ++.|+|+
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~-----~~~y~d~~ell~~-~~iDaV~ 99 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGF-----EKATADWRALIAD-PEVDVVS 99 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTC-----SEEESCHHHHHHC-TTCCEEE
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCC-----CeecCCHHHHhcC-CCCcEEE
Confidence 4799999999999877766432 45654 889999999998876531 2468899999875 3479999
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEE-EecC-CCCchhHHHHHHHHHHcCCeE
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCI-IDGG-NEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~ii-Id~s-t~~~~~~~~~~~~l~~~g~~~ 129 (474)
+|+|+....+.++.. ++.|.-| +.-- +....+.+++.+..++.|+.+
T Consensus 100 IatP~~~H~~~a~~a----l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 148 (393)
T 4fb5_A 100 VTTPNQFHAEMAIAA----LEAGKHVWCEKPMAPAYADAERMLATAERSGKVA 148 (393)
T ss_dssp ECSCGGGHHHHHHHH----HHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCE
T ss_pred ECCChHHHHHHHHHH----HhcCCeEEEccCCcccHHHHHHhhhhHHhcCCcc
Confidence 999998666555443 3455544 4421 223356667777777766543
No 223
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.11 E-value=1.7e-05 Score=80.99 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=79.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHC---------CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011931 8 TRIGLAGLAVMGQNLALNIAEK---------GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~---------G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvI 77 (474)
+||||||+|.||...+..|.+. +.+|. ++|+++++++++.++... ...+++.+++++. .+.|+|
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~-----~~~y~d~~~ll~~-~~vD~V 100 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGA-----EKAYGDWRELVND-PQVDVV 100 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTC-----SEEESSHHHHHHC-TTCCEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCC-----CeEECCHHHHhcC-CCCCEE
Confidence 5899999999999998888764 34554 889999999998876531 2467899999875 347999
Q ss_pred EEecCCChhHHHHHHHHHhcccCCCEE-EecC-CCCchhHHHHHHHHHHcCCeE
Q 011931 78 IMLVKAGAPVDETIKTLSAYMEKGDCI-IDGG-NEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 78 il~vp~~~~v~~vl~~l~~~l~~g~ii-Id~s-t~~~~~~~~~~~~l~~~g~~~ 129 (474)
++|+|+....+-++.. ++.|+-| +.-= +....+.+++.+..++.|+.+
T Consensus 101 ~I~tp~~~H~~~~~~a----l~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 150 (412)
T 4gqa_A 101 DITSPNHLHYTMAMAA----IAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKT 150 (412)
T ss_dssp EECSCGGGHHHHHHHH----HHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCE
T ss_pred EECCCcHHHHHHHHHH----HHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCee
Confidence 9999998665554443 3455544 4421 223456677777766767644
No 224
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.10 E-value=3.6e-06 Score=85.05 Aligned_cols=96 Identities=17% Similarity=0.139 Sum_probs=69.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCc-c---ccCCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPL-F---GFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~-~---~~~s~~e~~~~l~~~dvIil~vp 82 (474)
-.+|+|||+|.+|..+++.+...|.+|+++|+++++.+.+.+.... .+ . ...++.+++.. +|+||.+++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~----~~~~~~~~~~~l~~~l~~---aDvVi~~~~ 240 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG----RIHTRYSSAYELEGAVKR---ADLVIGAVL 240 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----SSEEEECCHHHHHHHHHH---CSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC----eeEeccCCHHHHHHHHcC---CCEEEECCC
Confidence 3579999999999999999999999999999999988777653311 11 0 12245566666 999999886
Q ss_pred CChh-HHHH-HHHHHhcccCCCEEEecCC
Q 011931 83 AGAP-VDET-IKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 83 ~~~~-v~~v-l~~l~~~l~~g~iiId~st 109 (474)
.+.. ...+ ..+..+.+++|.+|||.+.
T Consensus 241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred cCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence 4421 1111 2445667889999999883
No 225
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.10 E-value=1e-05 Score=83.44 Aligned_cols=119 Identities=20% Similarity=0.214 Sum_probs=82.5
Q ss_pred CcEEEEcc----cHhHHHHHHHHHHC--CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 8 TRIGLAGL----AVMGQNLALNIAEK--GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 8 ~~IgiIGl----G~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
+||||||+ |.||..++..|.+. +++| .++|+++++.+++.+..... .+..+++++++++. ...|+|++|
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~---~~~~~~~~~~ll~~-~~vD~V~i~ 96 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLS---NATAFPTLESFASS-STIDMIVIA 96 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCT---TCEEESSHHHHHHC-SSCSEEEEC
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCC---cceeeCCHHHHhcC-CCCCEEEEe
Confidence 58999999 99999999999986 6776 58999999988887654210 12367899999873 238999999
Q ss_pred cCCChhHHHHHHHHHhcc---cCCCEEEec-CCCCchhHHHHHHHHHHcCCeEE
Q 011931 81 VKAGAPVDETIKTLSAYM---EKGDCIIDG-GNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 81 vp~~~~v~~vl~~l~~~l---~~g~iiId~-st~~~~~~~~~~~~l~~~g~~~v 130 (474)
+|+....+.++..+.... +...++++. .+....+.+++.+..++.|+.+.
T Consensus 97 tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 150 (438)
T 3btv_A 97 IQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTI 150 (438)
T ss_dssp SCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEE
T ss_pred CCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 998755554443332210 002467773 34455677777777777776543
No 226
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.09 E-value=1.9e-05 Score=78.01 Aligned_cols=102 Identities=13% Similarity=0.170 Sum_probs=66.2
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhc-CC--CCccccCCHHHHHhhcCCCcEEEE
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKE-GD--LPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~-~~--~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
+..+||+|||+|.||.++|..|+..|+ +|.++|+++++++.......+. .. .++..+++..+.++. +|+||+
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~---aDvVvi 79 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKD---ADIVCI 79 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTT---CSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCC---CCEEEE
Confidence 345799999999999999999999997 8999999998877632211110 00 012223333344444 999999
Q ss_pred ecCCCh----h-----------HHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGA----P-----------VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~----~-----------v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+...+. . ++++.+.+... .++.+|+..||-
T Consensus 80 ~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNP 124 (326)
T 3pqe_A 80 CAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNP 124 (326)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred ecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCCh
Confidence 985432 1 22333444443 467788888874
No 227
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.09 E-value=1.5e-05 Score=81.79 Aligned_cols=74 Identities=11% Similarity=0.224 Sum_probs=56.5
Q ss_pred cCcEEEEcccHh--HHHHHHHHHH----CCCcEEEEeCChHHHHHHHHhhhhc--CCCCccccCCHHHHHhhcCCCcEEE
Q 011931 7 LTRIGLAGLAVM--GQNLALNIAE----KGFPISVYNRTTSKVDETVERAKKE--GDLPLFGFRDPESFVNSIQKPRVII 78 (474)
Q Consensus 7 ~~~IgiIGlG~m--G~~lA~~L~~----~G~~V~v~dr~~~~~~~l~~~~~~~--~~~~~~~~~s~~e~~~~l~~~dvIi 78 (474)
.+||+|||+|.| |.+++..|+. .| +|++||++++++++.......- ...+++.+++++++++. +|+||
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~d---ADfVI 80 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSA---ADIVI 80 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTT---CSEEE
T ss_pred CCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcC---CCEEE
Confidence 369999999997 5789988886 57 9999999998877654322100 01146678899999888 99999
Q ss_pred EecCCC
Q 011931 79 MLVKAG 84 (474)
Q Consensus 79 l~vp~~ 84 (474)
++++.+
T Consensus 81 ~airvG 86 (450)
T 3fef_A 81 ISILPG 86 (450)
T ss_dssp ECCCSS
T ss_pred eccccC
Confidence 999864
No 228
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.08 E-value=5.7e-05 Score=65.78 Aligned_cols=100 Identities=13% Similarity=0.228 Sum_probs=64.2
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCC-hHHHHHHHHhhhhcCCCCc-cc-cCCHHHHHh-hcCCCcEEEEecCC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRT-TSKVDETVERAKKEGDLPL-FG-FRDPESFVN-SIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~-~~~~~~l~~~~~~~~~~~~-~~-~~s~~e~~~-~l~~~dvIil~vp~ 83 (474)
++|.|+|+|.+|+.++..|.+.|++|+++|++ +++.+.+.+.... +..+ .. .++.+.+.+ .++++|.||+++++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcC--CCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 47999999999999999999999999999998 4655555432211 0011 11 123333322 25669999999998
Q ss_pred ChhHHHHHHHHHhcc-cCCCEEEecCCC
Q 011931 84 GAPVDETIKTLSAYM-EKGDCIIDGGNE 110 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l-~~g~iiId~st~ 110 (474)
+ .....+...+..+ +...+++...+.
T Consensus 82 d-~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 82 D-ADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp H-HHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred h-HHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 6 4444444444445 345666665553
No 229
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=98.08 E-value=1.6e-05 Score=81.17 Aligned_cols=115 Identities=14% Similarity=0.130 Sum_probs=74.1
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhh--cCCCcEEEEecCC
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNS--IQKPRVIIMLVKA 83 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~--l~~~dvIil~vp~ 83 (474)
..++|.|+|+|.+|..+++.|.+.|++|++.|+++++++.+.+.+.. -+....+..++... ++++|+||+++++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~----vi~GDat~~~~L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMK----VFYGDATRMDLLESAGAAKAEVLINAIDD 78 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCC----CEESCTTCHHHHHHTTTTTCSEEEECCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCe----EEEcCCCCHHHHHhcCCCccCEEEECCCC
Confidence 45689999999999999999999999999999999999988765431 01222223333322 5679999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v 130 (474)
+.... .+-..+..+.+...||-..+.. .....+...|+..+
T Consensus 79 ~~~n~-~i~~~ar~~~p~~~Iiara~~~-----~~~~~L~~~Gad~V 119 (413)
T 3l9w_A 79 PQTNL-QLTEMVKEHFPHLQIIARARDV-----DHYIRLRQAGVEKP 119 (413)
T ss_dssp HHHHH-HHHHHHHHHCTTCEEEEEESSH-----HHHHHHHHTTCSSC
T ss_pred hHHHH-HHHHHHHHhCCCCeEEEEECCH-----HHHHHHHHCCCCEE
Confidence 64333 3333444455654444333321 23344555665443
No 230
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.08 E-value=3.1e-05 Score=76.12 Aligned_cols=99 Identities=11% Similarity=0.163 Sum_probs=63.8
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCC--hHHHHHHHHhhhh----c-CCCCccccCCHHHHHhhcCCCcEEE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT--TSKVDETVERAKK----E-GDLPLFGFRDPESFVNSIQKPRVII 78 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~--~~~~~~l~~~~~~----~-~~~~~~~~~s~~e~~~~l~~~dvIi 78 (474)
.+||+|||+|.||.++|..|+.+|+ +|.++|++ +++.+.......+ . ...++..+++.++ ++. +|+||
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a-~~~---aDvVI 83 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYAD-TAD---SDVVV 83 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGG-GTT---CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHH-hCC---CCEEE
Confidence 4589999999999999999999999 99999999 4544432211100 0 0012344445433 344 99999
Q ss_pred EecCCCh---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 79 MLVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 79 l~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++...+. .++++.+.+... .++.+++..||-
T Consensus 84 iaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNP 129 (315)
T 3tl2_A 84 ITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNP 129 (315)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCCh
Confidence 9985432 122333445444 477888888874
No 231
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.07 E-value=1.1e-05 Score=81.85 Aligned_cols=90 Identities=10% Similarity=0.014 Sum_probs=70.6
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|+|||+|.+|+.+|+.+...|.+|+++|+++.+..+....+ +. ..+++++++. +|+|++++.+..
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G-------~~-vv~LeElL~~---ADIVv~atgt~~-- 314 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDG-------FE-VVTLDDAAST---ADIVVTTTGNKD-- 314 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CE-ECCHHHHGGG---CSEEEECCSSSS--
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcC-------ce-eccHHHHHhh---CCEEEECCCCcc--
Confidence 4799999999999999999999999999999987654443322 22 3478898888 999999876542
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWY 112 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~ 112 (474)
++ .+.+..+++|.+||+++....
T Consensus 315 --lI~~e~l~~MK~GAILINvGRgdv 338 (464)
T 3n58_A 315 --VITIDHMRKMKDMCIVGNIGHFDN 338 (464)
T ss_dssp --SBCHHHHHHSCTTEEEEECSSSTT
T ss_pred --ccCHHHHhcCCCCeEEEEcCCCCc
Confidence 23 455667899999999988753
No 232
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=98.06 E-value=4.5e-06 Score=80.39 Aligned_cols=111 Identities=12% Similarity=0.132 Sum_probs=77.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++.|||+|.||++++..|++.|. +|+++||++++.+++.+... .....++. . ..+|+||.++|.+..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~------~~~~~~~~--~---~~~DivInaTp~gm~ 188 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG------YAYINSLE--N---QQADILVNVTSIGMK 188 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT------CEEESCCT--T---CCCSEEEECSSTTCT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC------Cccchhhh--c---ccCCEEEECCCCCcc
Confidence 579999999999999999999997 89999999999988876532 11111221 2 239999999997632
Q ss_pred HH---HHHHHH-HhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec
Q 011931 87 VD---ETIKTL-SAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM 132 (474)
Q Consensus 87 v~---~vl~~l-~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~ 132 (474)
.. +.. .+ ...+.++.+++|....+ ..| .+.+..+++|..+++.
T Consensus 189 ~~~~~~~~-~~~~~~l~~~~~v~DlvY~P-~~T-~ll~~A~~~G~~~i~G 235 (271)
T 1npy_A 189 GGKEEMDL-AFPKAFIDNASVAFDVVAMP-VET-PFIRYAQARGKQTISG 235 (271)
T ss_dssp TSTTTTSC-SSCHHHHHHCSEEEECCCSS-SSC-HHHHHHHHTTCEEECH
T ss_pred CccccCCC-CCCHHHcCCCCEEEEeecCC-CCC-HHHHHHHHCCCEEECC
Confidence 10 000 01 12345688999998744 444 5666677888877654
No 233
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.06 E-value=3.5e-05 Score=78.87 Aligned_cols=115 Identities=13% Similarity=0.208 Sum_probs=79.6
Q ss_pred CcEEEEcccH---hHHHHHHHHHHCC-CcEE--EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhc----CCCcEE
Q 011931 8 TRIGLAGLAV---MGQNLALNIAEKG-FPIS--VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSI----QKPRVI 77 (474)
Q Consensus 8 ~~IgiIGlG~---mG~~lA~~L~~~G-~~V~--v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l----~~~dvI 77 (474)
+||||||+|. ||...+..+...+ ++|. ++|+++++.+++.++.... ....+++++++++.- ...|+|
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~---~~~~~~~~~~ll~~~~~~~~~vD~V 114 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLD---PSRVYSDFKEMAIREAKLKNGIEAV 114 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCC---GGGBCSCHHHHHHHHHHCTTCCSEE
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCC---cccccCCHHHHHhcccccCCCCcEE
Confidence 4899999999 9999988887765 5765 6799999998888765210 015788999998641 348999
Q ss_pred EEecCCChhHHHHHHHHHhcccCCCE-EEecC-CCCchhHHHHHHHHHHcCCeE
Q 011931 78 IMLVKAGAPVDETIKTLSAYMEKGDC-IIDGG-NEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 78 il~vp~~~~v~~vl~~l~~~l~~g~i-iId~s-t~~~~~~~~~~~~l~~~g~~~ 129 (474)
++|+|+....+-+.. .++.|.- +++-- +......+++.+..++.|+.+
T Consensus 115 ~I~tp~~~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 164 (417)
T 3v5n_A 115 AIVTPNHVHYAAAKE----FLKRGIHVICDKPLTSTLADAKKLKKAADESDALF 164 (417)
T ss_dssp EECSCTTSHHHHHHH----HHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCE
T ss_pred EECCCcHHHHHHHHH----HHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEE
Confidence 999999865544332 3445654 44432 334466777777777777654
No 234
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.06 E-value=2.2e-05 Score=78.60 Aligned_cols=112 Identities=17% Similarity=0.249 Sum_probs=75.9
Q ss_pred CcCcEEEEcccHhHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+++||||||+|.||.. .+..+.+. +++|. ++|+++++. .+... +...+++++++++. ...|+|++|+|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~---~~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp 74 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEV---KRDFP-----DAEVVHELEEITND-PAIELVIVTTP 74 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHH---HHHCT-----TSEEESSTHHHHTC-TTCCEEEECSC
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH---HhhCC-----CCceECCHHHHhcC-CCCCEEEEcCC
Confidence 3468999999999997 67777655 67765 889998763 22221 25678899999873 23899999999
Q ss_pred CChhHHHHHHHHHhcccCCCEE-EecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 83 AGAPVDETIKTLSAYMEKGDCI-IDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~ii-Id~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
+....+.+.. .+..|+-| ++-- +......+++.+..++.|+.+.
T Consensus 75 ~~~H~~~~~~----al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~ 120 (358)
T 3gdo_A 75 SGLHYEHTMA----CIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLS 120 (358)
T ss_dssp TTTHHHHHHH----HHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred cHHHHHHHHH----HHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 9866554433 34456544 4431 3345667777777777776543
No 235
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.06 E-value=4.3e-06 Score=84.76 Aligned_cols=90 Identities=8% Similarity=0.089 Sum_probs=69.9
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
.+|+|+|+|.+|..+|+.|...|.+|+++|+++.+..+....+ +. ..++++++.. +|+|++|..+.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G-------~~-v~~Leeal~~---ADIVi~atgt~--- 286 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDG-------FR-LVKLNEVIRQ---VDIVITCTGNK--- 286 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE-ECCHHHHTTT---CSEEEECSSCS---
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcC-------CE-eccHHHHHhc---CCEEEECCCCc---
Confidence 4799999999999999999999999999999987655444332 22 3578888887 99999974332
Q ss_pred HHHH-HHHHhcccCCCEEEecCCCCc
Q 011931 88 DETI-KTLSAYMEKGDCIIDGGNEWY 112 (474)
Q Consensus 88 ~~vl-~~l~~~l~~g~iiId~st~~~ 112 (474)
.++ .+.+..+++|.+||+++...+
T Consensus 287 -~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 287 -NVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp -CSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred -ccCCHHHHHhcCCCcEEEEecCCCc
Confidence 233 355667889999999998764
No 236
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.06 E-value=9.2e-06 Score=76.77 Aligned_cols=84 Identities=18% Similarity=0.128 Sum_probs=60.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
||||+|+|+|.||+.++..+.+.++++. ++|++++. .. ++..+++++++. . +|+||-+.++.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~~-------gv~v~~dl~~l~-~---~DVvIDft~p~- 65 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----TT-------PYQQYQHIADVK-G---ADVAIDFSNPN- 65 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------C-------CSCBCSCTTTCT-T---CSEEEECSCHH-
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----cC-------CCceeCCHHHHh-C---CCEEEEeCChH-
Confidence 6899999999999999999998877765 57988762 11 356778888876 5 99998555432
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCc
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWY 112 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~ 112 (474)
.+...+ . +..|.-+|..+|+..
T Consensus 66 a~~~~~----~-l~~g~~vVigTTG~s 87 (243)
T 3qy9_A 66 LLFPLL----D-EDFHLPLVVATTGEK 87 (243)
T ss_dssp HHHHHH----T-SCCCCCEEECCCSSH
T ss_pred HHHHHH----H-HhcCCceEeCCCCCC
Confidence 333333 2 677777777777753
No 237
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.05 E-value=1.5e-05 Score=78.54 Aligned_cols=100 Identities=9% Similarity=0.080 Sum_probs=69.4
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhc----CCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKE----GDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~----~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
..+||+|||+|.||.++|..|+.+|+ +|.++|+++++++.......+. ...++..+.++++ .+. ||+||+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~d---aDiVIi 95 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAG---SKLVVI 95 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSS---CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCC---CCEEEE
Confidence 35799999999999999999999997 8999999998776543221110 0002344556655 344 999999
Q ss_pred ecCCCh---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+...+. .++++...+.+. .++.+++..||-
T Consensus 96 taG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNP 140 (330)
T 3ldh_A 96 TAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPEL 140 (330)
T ss_dssp CCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred eCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCc
Confidence 875442 234455666665 678888888874
No 238
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.02 E-value=2.6e-05 Score=75.03 Aligned_cols=113 Identities=16% Similarity=0.132 Sum_probs=75.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.+++.|+|+|.||.+++..|++.|.+|+++||++++.+++.+.....+ .+. ..+.+++.+ ..+|+||.++|.+..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~--~~~-~~~~~~~~~--~~~DivVn~t~~~~~ 193 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQ-ALSMDELEG--HEFDLIINATSSGIS 193 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEE-ECCSGGGTT--CCCSEEEECCSCGGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC--Cee-EecHHHhcc--CCCCEEEECCCCCCC
Confidence 357999999999999999999999999999999999888876532110 111 123333321 249999999997632
Q ss_pred HHHHHHHHH-hcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011931 87 VDETIKTLS-AYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 87 v~~vl~~l~-~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (474)
..+ ..+. ..+.++.+++|.+... ..+. ..+..+++|..
T Consensus 194 -~~~-~~i~~~~l~~~~~v~D~~y~p-~~t~-~~~~a~~~G~~ 232 (271)
T 1nyt_A 194 -GDI-PAIPSSLIHPGIYCYDMFYQK-GKTP-FLAWCEQRGSK 232 (271)
T ss_dssp -TCC-CCCCGGGCCTTCEEEESCCCS-SCCH-HHHHHHHTTCC
T ss_pred -CCC-CCCCHHHcCCCCEEEEeccCC-cCCH-HHHHHHHcCCC
Confidence 111 0111 2356889999998864 4443 44555667764
No 239
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.02 E-value=1.6e-05 Score=79.25 Aligned_cols=114 Identities=11% Similarity=0.153 Sum_probs=74.7
Q ss_pred cCcEEEEcccHhHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
|+||||||+|.||.. .+..+.+. +++|. ++|++ +.+++.+..... ++..+++++++++. .+.|+|++|+|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~~---~~~~~~~~~~ll~~-~~~D~V~i~tp~ 75 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAPFKEK---GVNFTADLNELLTD-PEIELITICTPA 75 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHHHHTT---TCEEESCTHHHHSC-TTCCEEEECSCG
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHhhCCC---CCeEECCHHHHhcC-CCCCEEEEeCCc
Confidence 569999999999994 55556554 67775 88988 444554432111 35678899999874 347999999999
Q ss_pred ChhHHHHHHHHHhcccCCCEE-EecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPVDETIKTLSAYMEKGDCI-IDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~ii-Id~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
....+.+.. .+..|..| ++-- +......+++.+..+++|+.+.
T Consensus 76 ~~h~~~~~~----al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 120 (349)
T 3i23_A 76 HTHYDLAKQ----AILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVM 120 (349)
T ss_dssp GGHHHHHHH----HHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHH----HHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 765544433 34456544 4422 3344567777777777776543
No 240
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.02 E-value=1.8e-05 Score=81.87 Aligned_cols=74 Identities=15% Similarity=0.280 Sum_probs=54.2
Q ss_pred CcEEEEcccHh-HHHHHHHHHHC-----CCcEEEEeCChHHHHHHHHhhh----hcC-CCCccccCCHHHHHhhcCCCcE
Q 011931 8 TRIGLAGLAVM-GQNLALNIAEK-----GFPISVYNRTTSKVDETVERAK----KEG-DLPLFGFRDPESFVNSIQKPRV 76 (474)
Q Consensus 8 ~~IgiIGlG~m-G~~lA~~L~~~-----G~~V~v~dr~~~~~~~l~~~~~----~~~-~~~~~~~~s~~e~~~~l~~~dv 76 (474)
+||+|||+|.+ |.++|..|+.+ +++|.+||+++++++....... ..+ ..++..+++++++++. +|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~---AD~ 105 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTD---VDF 105 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSS---CSE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcC---CCE
Confidence 48999999998 66688888887 6799999999988765432110 000 1135566788777777 999
Q ss_pred EEEecCCC
Q 011931 77 IIMLVKAG 84 (474)
Q Consensus 77 Iil~vp~~ 84 (474)
||+++|.+
T Consensus 106 VViaag~~ 113 (472)
T 1u8x_X 106 VMAHIRVG 113 (472)
T ss_dssp EEECCCTT
T ss_pred EEEcCCCc
Confidence 99999885
No 241
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.99 E-value=4.5e-05 Score=77.45 Aligned_cols=116 Identities=11% Similarity=0.033 Sum_probs=80.8
Q ss_pred cCcEEEEcccH---hHHHHHHHHHHCC-CcEE--EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhc----CCCcE
Q 011931 7 LTRIGLAGLAV---MGQNLALNIAEKG-FPIS--VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSI----QKPRV 76 (474)
Q Consensus 7 ~~~IgiIGlG~---mG~~lA~~L~~~G-~~V~--v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l----~~~dv 76 (474)
++||||||+|. ||...+..+...+ ++|. ++|+++++.+++.++.... ....+++++++++.- ...|+
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~---~~~~~~~~~~ll~~~~~~~~~vD~ 88 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVD---SERCYADYLSMFEQEARRADGIQA 88 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCC---GGGBCSSHHHHHHHHTTCTTCCSE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCC---cceeeCCHHHHHhcccccCCCCCE
Confidence 35899999999 9999998887765 6765 5799999998887754210 015788999998741 23899
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCEEEe-c-CCCCchhHHHHHHHHHHcCCeE
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIID-G-GNEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~iiId-~-st~~~~~~~~~~~~l~~~g~~~ 129 (474)
|++|+|+....+.++. .+..|.-|+- - -+......+++.+..++.|+.+
T Consensus 89 V~i~tp~~~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 139 (398)
T 3dty_A 89 VSIATPNGTHYSITKA----ALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIV 139 (398)
T ss_dssp EEEESCGGGHHHHHHH----HHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCE
T ss_pred EEECCCcHHHHHHHHH----HHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeE
Confidence 9999999865544433 3345655543 1 1234466777777777777654
No 242
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.98 E-value=3.6e-05 Score=75.49 Aligned_cols=96 Identities=17% Similarity=0.280 Sum_probs=65.7
Q ss_pred cEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh----cC-CCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 9 RIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK----EG-DLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 9 ~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~----~~-~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
||+|||+|.||.+++..|+.+|+ +|.++|+++++++.......+ .+ ..+++.+.+. +.++. +|+||++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~---aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRG---SDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT---CSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCC---CCEEEEeCC
Confidence 69999999999999999998888 799999998877643322111 00 1134444555 34444 999999976
Q ss_pred CCh---------------hHHHHHHHHHhcccCCCEEEecCC
Q 011931 83 AGA---------------PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 83 ~~~---------------~v~~vl~~l~~~l~~g~iiId~st 109 (474)
.+. .+++++..+.+.. ++.++|..||
T Consensus 77 ~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tN 117 (308)
T 2d4a_B 77 IGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTN 117 (308)
T ss_dssp CCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCC
Confidence 653 1445556666654 7777777877
No 243
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.98 E-value=1.6e-05 Score=81.13 Aligned_cols=96 Identities=21% Similarity=0.258 Sum_probs=66.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
..+|+|||+|.||..++..|...|. +|+++||++++.+++.+.... ......++.+++.. +|+||.++|.+.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~----~~~~~~~l~~~l~~---aDvVi~at~~~~ 239 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG----EAVRFDELVDHLAR---SDVVVSATAAPH 239 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC----EECCGGGHHHHHHT---CSEEEECCSSSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC----ceecHHhHHHHhcC---CCEEEEccCCCC
Confidence 4579999999999999999999998 899999999988666654321 11122456666666 999999998765
Q ss_pred hHH--HHHHH-HHh-cccCCCEEEecCC
Q 011931 86 PVD--ETIKT-LSA-YMEKGDCIIDGGN 109 (474)
Q Consensus 86 ~v~--~vl~~-l~~-~l~~g~iiId~st 109 (474)
.+. ..+.. +.+ .-.++.+++|.+.
T Consensus 240 ~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 240 PVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp CCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred ceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 432 22332 211 1124557777764
No 244
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.98 E-value=4.4e-05 Score=75.18 Aligned_cols=99 Identities=11% Similarity=0.173 Sum_probs=64.4
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcC--CCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEG--DLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~~--~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
+||+|||+|.+|.+++..|+..+. +|.++|+++++++.......+.. ..+++...+..+..+. +|+||++.+.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~---aDvVii~ag~ 82 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKD---ADLVVITAGA 82 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTT---CSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCC---CCEEEECCCC
Confidence 799999999999999999998886 89999999988775433221100 0012222233444444 9999999876
Q ss_pred Ch---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 84 GA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 84 ~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+. .++++.+.+... .+..+|+..||-
T Consensus 83 ~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP 123 (318)
T 1ez4_A 83 PQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANP 123 (318)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCc
Confidence 52 122333444444 577777777663
No 245
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.98 E-value=1.4e-05 Score=80.52 Aligned_cols=97 Identities=12% Similarity=0.143 Sum_probs=67.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc----ccCCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF----GFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~----~~~s~~e~~~~l~~~dvIil~vp 82 (474)
.++|+|+|+|.+|..+++.+...|++|+++||++++.+.+.+.... .+. ...++++++.. +|+||.+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~----~~~~~~~~~~~l~~~~~~---~DvVi~~~g 238 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG----RVITLTATEANIKKSVQH---ADLLIGAVL 238 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----SEEEEECCHHHHHHHHHH---CSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc----eEEEecCCHHHHHHHHhC---CCEEEECCC
Confidence 3689999999999999999999999999999999988776653311 110 12234556666 999999998
Q ss_pred CCh-hHHHH-HHHHHhcccCCCEEEecCCC
Q 011931 83 AGA-PVDET-IKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 83 ~~~-~v~~v-l~~l~~~l~~g~iiId~st~ 110 (474)
.+. ....+ .....+.++++.+|||.+..
T Consensus 239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC--
T ss_pred CCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence 642 11111 24556778889999999853
No 246
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.97 E-value=9.7e-06 Score=82.49 Aligned_cols=93 Identities=11% Similarity=0.180 Sum_probs=66.0
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcccc-------------------------C
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGF-------------------------R 62 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~-------------------------~ 62 (474)
.+|+|||+|.+|...++.+...|.+|+++|+++++.+.+.+.+.. .... .
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 247 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAE-----FLELDFKEEAGSGDGYAKVMSDAFIKAEME 247 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCE-----ECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCE-----EEEecccccccccccchhhccHHHHHHHHH
Confidence 579999999999999999999999999999999988776544321 1100 0
Q ss_pred CHHHHHhhcCCCcEEEEe--cCCChhHHHHH-HHHHhcccCCCEEEecCC
Q 011931 63 DPESFVNSIQKPRVIIML--VKAGAPVDETI-KTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 63 s~~e~~~~l~~~dvIil~--vp~~~~v~~vl-~~l~~~l~~g~iiId~st 109 (474)
++++++.. +|+||.+ +|... ...++ .+.+..+++|.+|||++.
T Consensus 248 ~l~e~~~~---aDvVI~~~~~pg~~-ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 248 LFAAQAKE---VDIIVTTALIPGKP-APKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHHH---CSEEEECCCCTTSC-CCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHHHhCC---CCEEEECCccCCCC-CCeeeCHHHHhcCCCCcEEEEEcC
Confidence 24555666 9999999 44211 11112 344566889999999985
No 247
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.96 E-value=1.8e-05 Score=79.42 Aligned_cols=112 Identities=16% Similarity=0.193 Sum_probs=76.3
Q ss_pred CcCcEEEEcccHhHHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAGLAVMGQN-LALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+++||||||+|.||.. .+..|.+. +++|. ++|+++++.. +... ....+++++++++. .+.|+|++|+|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~---~~~~-----~~~~~~~~~~ll~~-~~vD~V~i~tp 74 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK---ERYP-----QASIVRSFKELTED-PEIDLIVVNTP 74 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG---TTCT-----TSEEESCSHHHHTC-TTCCEEEECSC
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH---HhCC-----CCceECCHHHHhcC-CCCCEEEEeCC
Confidence 3468999999999997 67777665 67775 8899987632 2111 25678899999874 44799999999
Q ss_pred CChhHHHHHHHHHhcccCCC-EEEecC-CCCchhHHHHHHHHHHcCCeEE
Q 011931 83 AGAPVDETIKTLSAYMEKGD-CIIDGG-NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~-iiId~s-t~~~~~~~~~~~~l~~~g~~~v 130 (474)
+....+.+.. .+..|. ++++-- +......+++.+..++.|+.+.
T Consensus 75 ~~~H~~~~~~----al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (362)
T 3fhl_A 75 DNTHYEYAGM----ALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLS 120 (362)
T ss_dssp GGGHHHHHHH----HHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHHH----HHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9765554433 334555 445432 3445667777777777776543
No 248
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.96 E-value=5.5e-05 Score=74.70 Aligned_cols=102 Identities=12% Similarity=0.134 Sum_probs=66.3
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcC--CCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEG--DLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~~--~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
++.+||+|||+|.+|.+++..|+..+. +|.++|+++++++.......+.. ..++....+..+..+. +|+||++
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~---aDvVii~ 83 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKD---ADLVVIT 83 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGG---CSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCC---CCEEEEc
Confidence 345799999999999999999998886 89999999988765443221100 0012232344445555 9999999
Q ss_pred cCCChh---------------HHHHHHHHHhcccCCCEEEecCCC
Q 011931 81 VKAGAP---------------VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 81 vp~~~~---------------v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.+.+.. ++++.+.+..+ .+..+|+..||-
T Consensus 84 ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP 127 (326)
T 2zqz_A 84 AGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANP 127 (326)
T ss_dssp CCCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCc
Confidence 876521 22233444444 477777777663
No 249
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.94 E-value=4e-05 Score=75.22 Aligned_cols=98 Identities=13% Similarity=0.150 Sum_probs=62.9
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhh----cC-CCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKK----EG-DLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~----~~-~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
|||+|||+|.||.++|..|+..|+ +|.++|+++++++.......+ .. ..++..+ +..+.++. +|+||++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~-~~~~a~~~---aDvVii~ 76 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT-NDYGPTED---SDVCIIT 76 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE-SSSGGGTT---CSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC-CCHHHhCC---CCEEEEC
Confidence 689999999999999999999887 999999999876533211110 00 0012223 33444444 9999999
Q ss_pred cCCChh---------------HHHHHHHHHhcccCCCEEEecCCC
Q 011931 81 VKAGAP---------------VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 81 vp~~~~---------------v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.+.+.. ++++...+... .|..+++..||-
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNP 120 (314)
T 3nep_X 77 AGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANP 120 (314)
T ss_dssp CCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSS
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCc
Confidence 865421 22222344443 577888888874
No 250
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.94 E-value=1.9e-05 Score=76.61 Aligned_cols=110 Identities=16% Similarity=0.053 Sum_probs=75.2
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCC
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~--~l~~~dvIil~vp~ 83 (474)
.+||+|+|+ |.||..+++++.+.|++ .++..+|.+.. +.. . ++..+.+++|+.+ . +|++++++|+
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g---~~~--~---G~~vy~sl~el~~~~~---~D~viI~tP~ 74 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGG---TTH--L---GLPVFNTVREAVAATG---ATASVIYVPA 74 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT---CEE--T---TEEEESSHHHHHHHHC---CCEEEECCCG
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCccc---cee--C---CeeccCCHHHHhhcCC---CCEEEEecCH
Confidence 468999998 99999999999998998 44455543210 000 1 3677889999987 5 9999999999
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCc-hhHHHHHHHHHHcCCeEEe
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWY-ENTERREKAMAELGLLYLG 131 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~~l~~~g~~~v~ 131 (474)
. .+.+++.+.... .. ..+|..+...+ .+.+++.+..++.|+.+++
T Consensus 75 ~-~~~~~~~ea~~~-Gi-~~iVi~t~G~~~~~~~~l~~~A~~~gv~liG 120 (288)
T 2nu8_A 75 P-FCKDSILEAIDA-GI-KLIITITEGIPTLDMLTVKVKLDEAGVRMIG 120 (288)
T ss_dssp G-GHHHHHHHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred H-HHHHHHHHHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 6 556666555442 11 34444555443 3455677777778988774
No 251
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.94 E-value=4.6e-05 Score=78.95 Aligned_cols=113 Identities=12% Similarity=0.143 Sum_probs=78.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCC---HHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRD---PESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--~~s---~~e~~~~l~~~dvIil~ 80 (474)
+++|.|+|+|.+|+.++..|++. |++|+++||++++++++.+... ..... ..+ +.++++. +|+||.|
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~----~~~~~~D~~d~~~l~~~l~~---~DvVIn~ 95 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSG----SKAISLDVTDDSALDKVLAD---NDVVISL 95 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGT----CEEEECCTTCHHHHHHHHHT---SSEEEEC
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcC----CcEEEEecCCHHHHHHHHcC---CCEEEEC
Confidence 46799999999999999999998 7899999999999888765411 00101 122 3344454 9999999
Q ss_pred cCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 81 VKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
+|.... ..+.. ..+.+|..++|.+...+ .+..+.+..++.|+.+++
T Consensus 96 tp~~~~-~~v~~---a~l~~g~~vvd~~~~~p-~~~~Ll~~Ak~aGv~~i~ 141 (467)
T 2axq_A 96 IPYTFH-PNVVK---SAIRTKTDVVTSSYISP-ALRELEPEIVKAGITVMN 141 (467)
T ss_dssp SCGGGH-HHHHH---HHHHHTCEEEECSCCCH-HHHHHHHHHHHHTCEEEC
T ss_pred Cchhhh-HHHHH---HHHhcCCEEEEeecCCH-HHHHHHHHHHHcCCEEEe
Confidence 997532 23332 23456888999866444 345666666777876654
No 252
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.91 E-value=6.1e-05 Score=77.75 Aligned_cols=115 Identities=11% Similarity=0.141 Sum_probs=76.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc----ccCCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF----GFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~----~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+++|.|+|+|.+|+.++..|++.|++|+++||++++.+++.+... ++. -..+.+++.+.++++|+||.++|
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~-----~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-----HSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT-----TEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC-----CceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 457999999999999999999999999999999988877654321 011 11233333222334999999998
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
..... .+.. ..+.+|..++|.+...+ .+..+.+..++.|+.++.
T Consensus 78 ~~~~~-~i~~---a~l~~g~~vvd~~~~~~-~~~~l~~aA~~aGv~~i~ 121 (450)
T 1ff9_A 78 YTFHA-TVIK---SAIRQKKHVVTTSYVSP-AMMELDQAAKDAGITVMN 121 (450)
T ss_dssp --CHH-HHHH---HHHHHTCEEEESSCCCH-HHHHTHHHHHHTTCEEEC
T ss_pred cccch-HHHH---HHHhCCCeEEEeecccH-HHHHHHHHHHHCCCeEEe
Confidence 75332 2222 23456788888866554 445666777778887654
No 253
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.90 E-value=2.9e-05 Score=76.65 Aligned_cols=125 Identities=15% Similarity=0.182 Sum_probs=77.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC---------CCcEE-EEeCChHHHH-----H-HHHhhhhcCCCCccccC--CHHHHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK---------GFPIS-VYNRTTSKVD-----E-TVERAKKEGDLPLFGFR--DPESFV 68 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~---------G~~V~-v~dr~~~~~~-----~-l~~~~~~~~~~~~~~~~--s~~e~~ 68 (474)
|+||||||+|.||+.++..|.+. +.+|. ++|+++++.+ + +...... ...++ ++++++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~-----~~~~~~~d~~~ll 76 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRET-----GMLRDDAKAIEVV 76 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHH-----SSCSBCCCHHHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccC-----ccccCCCCHHHHh
Confidence 67999999999999999999875 45555 7788865422 1 2111111 12344 899988
Q ss_pred hhcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCch-hHHHHHHHHHHcCCeEE-ecCCCCC
Q 011931 69 NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAELGLLYL-GMGVSGG 137 (474)
Q Consensus 69 ~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~v-~~pvsgg 137 (474)
+. ...|+|+.|+|+.....+..+.+...+..|..|+..+..... ...++.+..+++|+.|+ .+.+.++
T Consensus 77 ~~-~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g 146 (327)
T 3do5_A 77 RS-ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGA 146 (327)
T ss_dssp HH-SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTT
T ss_pred cC-CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeec
Confidence 75 347999999998643111334445667889988876553222 23445555567787654 4444443
No 254
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.89 E-value=1.7e-05 Score=76.25 Aligned_cols=112 Identities=14% Similarity=0.050 Sum_probs=76.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
..++.|+|+|.+|++++..|++.|. +|+++||++++.+++.+.... + ++.. .+.+++.. ..+|+||.++|.+.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~--~~~~-~~~~~l~~--~~~DivInaTp~gm 193 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S--RLRI-SRYEALEG--QSFDIVVNATSASL 193 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T--TEEE-ECSGGGTT--CCCSEEEECSSGGG
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C--CeeE-eeHHHhcc--cCCCEEEECCCCCC
Confidence 3579999999999999999999996 999999999999988876421 0 1121 23333321 34999999999753
Q ss_pred hHHH-HHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCe
Q 011931 86 PVDE-TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 86 ~v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 128 (474)
.-+. .+. ...+.++.+|+|....+ ..|. +.+..+++|..
T Consensus 194 ~~~~~~i~--~~~l~~~~~V~DlvY~P-~~T~-ll~~A~~~G~~ 233 (272)
T 3pwz_A 194 TADLPPLP--ADVLGEAALAYELAYGK-GLTP-FLRLAREQGQA 233 (272)
T ss_dssp GTCCCCCC--GGGGTTCSEEEESSCSC-CSCH-HHHHHHHHSCC
T ss_pred CCCCCCCC--HHHhCcCCEEEEeecCC-CCCH-HHHHHHHCCCC
Confidence 2110 010 13467899999998764 3443 44555667765
No 255
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.88 E-value=3.1e-05 Score=74.90 Aligned_cols=117 Identities=18% Similarity=0.196 Sum_probs=78.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcC-CCCccccC--CHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEG-DLPLFGFR--DPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~-~~~~~~~~--s~~e~~~~l~~~dvIil~vp 82 (474)
..++.|+|+|.+|++++..|++.|. +|+++||++++.+++.+...... ...+...+ ++.+.+.. +|+||-++|
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~---~DiVInaTp 203 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAA---ADGVVNATP 203 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHH---SSEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhc---CCEEEECCC
Confidence 3579999999999999999999998 69999999999888776532110 00122322 66677777 999999998
Q ss_pred CChhHHH--HHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011931 83 AGAPVDE--TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 83 ~~~~v~~--vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v 130 (474)
.+-.-.. .+. ...+.++.+|+|..-.+.. | .+.+..+++|...+
T Consensus 204 ~Gm~~~~~~pi~--~~~l~~~~~v~DlvY~P~~-T-~ll~~A~~~G~~~~ 249 (283)
T 3jyo_A 204 MGMPAHPGTAFD--VSCLTKDHWVGDVVYMPIE-T-ELLKAARALGCETL 249 (283)
T ss_dssp TTSTTSCSCSSC--GGGCCTTCEEEECCCSSSS-C-HHHHHHHHHTCCEE
T ss_pred CCCCCCCCCCCC--HHHhCCCCEEEEecCCCCC-C-HHHHHHHHCcCeEe
Confidence 6521100 011 2347788999998775433 3 23344456676544
No 256
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.87 E-value=1.8e-05 Score=78.02 Aligned_cols=87 Identities=16% Similarity=0.401 Sum_probs=62.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
++||+|||+|+||+.++..+.+. +.++ .++|+++++ .+. . ++..++++++++.. +|+|++|+|+.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~--~------gv~~~~d~~~ll~~---~DvViiatp~~ 69 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK--T------PVFDVADVDKHADD---VDVLFLCMGSA 69 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS--S------CEEEGGGGGGTTTT---CSEEEECSCTT
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc--C------CCceeCCHHHHhcC---CCEEEEcCCcH
Confidence 46899999999999999999876 5665 588998655 221 1 24556677776644 99999999987
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
...+.+ ...++.|..+++....
T Consensus 70 ~h~~~~----~~al~aG~~Vv~ekp~ 91 (320)
T 1f06_A 70 TDIPEQ----APKFAQFACTVDTYDN 91 (320)
T ss_dssp THHHHH----HHHHTTTSEEECCCCC
T ss_pred HHHHHH----HHHHHCCCEEEECCCC
Confidence 544433 3445668878776654
No 257
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.86 E-value=6.4e-05 Score=75.56 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=74.4
Q ss_pred CcEEEEcccHhHHHHHHHHHHCC--------CcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKG--------FPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII 78 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G--------~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi 78 (474)
-||||||+|.||...+..+.+.. .+| .++|+++++++++.++... ...+++.+++++. ++.|+|+
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~-----~~~~~d~~~ll~~-~~iDaV~ 80 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGW-----STTETDWRTLLER-DDVQLVD 80 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTC-----SEEESCHHHHTTC-TTCSEEE
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCC-----CcccCCHHHHhcC-CCCCEEE
Confidence 37999999999999888776532 244 4889999999988876531 2467899999865 4479999
Q ss_pred EecCCChhHHHHHHHHHhcccCCCE-EEecC-CCCchhHHHHHHH---HHHcCCe
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDC-IIDGG-NEWYENTERREKA---MAELGLL 128 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~i-iId~s-t~~~~~~~~~~~~---l~~~g~~ 128 (474)
+|+|+..+.+.++.. +..|+- ++.-= +....+.+++.+. .++.|+.
T Consensus 81 I~tP~~~H~~~~~~a----l~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~ 131 (390)
T 4h3v_A 81 VCTPGDSHAEIAIAA----LEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIR 131 (390)
T ss_dssp ECSCGGGHHHHHHHH----HHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCC
T ss_pred EeCChHHHHHHHHHH----HHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCc
Confidence 999998766655443 335554 44421 2223455666333 4445543
No 258
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.86 E-value=0.00011 Score=72.93 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=54.9
Q ss_pred CCcCcEEEEcc-cHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcC--CCCccccCCHHHHHhhcCCCcEEEE
Q 011931 5 KQLTRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEG--DLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 5 ~~~~~IgiIGl-G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~~--~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
..++||+|||+ |.+|.++|..++..|. +|.++|+++++++.......+.. ..++..++++.+.++. +|+||+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d---ADvVvi 82 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD---AKYIVS 82 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT---EEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC---CCEEEE
Confidence 45679999997 9999999999999984 89999999887665322111100 0134555677777776 999999
Q ss_pred ecCC
Q 011931 80 LVKA 83 (474)
Q Consensus 80 ~vp~ 83 (474)
+...
T Consensus 83 taG~ 86 (343)
T 3fi9_A 83 SGGA 86 (343)
T ss_dssp CCC-
T ss_pred ccCC
Confidence 9743
No 259
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.86 E-value=7.1e-05 Score=73.41 Aligned_cols=99 Identities=10% Similarity=0.199 Sum_probs=64.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCC--CcEEEEeCChHHHHHHHHhhhhcC--CCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKKEG--DLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~~~~--~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
|||+|||+|.+|.+++..|+..+ .+|.++|+++++++.......+.. ..+.....+..+..+. +|+||++.+.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~---aD~Vii~ag~ 77 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEG---ARAVVLAAGV 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTT---EEEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCC---CCEEEECCCC
Confidence 68999999999999999999887 589999999988775433322100 0012222223444444 9999999866
Q ss_pred Chh---------------HHHHHHHHHhcccCCCEEEecCCC
Q 011931 84 GAP---------------VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 84 ~~~---------------v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.. ++++.+.+... .+..+|+..||-
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP 118 (310)
T 2xxj_A 78 AQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNP 118 (310)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred CCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCc
Confidence 532 23333444444 567778777663
No 260
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.85 E-value=7.6e-05 Score=73.56 Aligned_cols=103 Identities=12% Similarity=0.127 Sum_probs=66.9
Q ss_pred CCCcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhcCC--CCccccCCHHHHHhhcCCCcEEEE
Q 011931 4 GKQLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKEGD--LPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 4 ~~~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~~~--~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
++..+||+|||+|.||.++|..|+..|+ +|.++|+++++++.......+... .++...++..+..+. +|+||+
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~---aDiVvi 82 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKD---ADLVVI 82 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTT---CSEEEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcC---CCEEEE
Confidence 4556799999999999999999999987 899999999887754432211000 012333333444444 999999
Q ss_pred ecCCCh---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+...+. .++++.+.+..+ .|..+++..||-
T Consensus 83 ~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvtNP 127 (326)
T 3vku_A 83 TAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANP 127 (326)
T ss_dssp CCCCC----------------CHHHHHHHHHTT-TCCSEEEECSSS
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEccCc
Confidence 875432 122333444443 467788888773
No 261
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.85 E-value=7.1e-05 Score=77.07 Aligned_cols=75 Identities=12% Similarity=0.116 Sum_probs=54.5
Q ss_pred cCcEEEEcccHh-HHHHHHHHHHC-----CCcEEEEeCCh--HHHHHHHH---hhh-hcC-CCCccccCCHHHHHhhcCC
Q 011931 7 LTRIGLAGLAVM-GQNLALNIAEK-----GFPISVYNRTT--SKVDETVE---RAK-KEG-DLPLFGFRDPESFVNSIQK 73 (474)
Q Consensus 7 ~~~IgiIGlG~m-G~~lA~~L~~~-----G~~V~v~dr~~--~~~~~l~~---~~~-~~~-~~~~~~~~s~~e~~~~l~~ 73 (474)
.+||+|||+|.+ |.+++..|+.+ +.+|.+||+++ ++++.... ... ..+ ..++..++++.++++.
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g--- 83 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG--- 83 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT---
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC---
Confidence 469999999999 88888888874 66899999999 87665321 110 000 1135556777777777
Q ss_pred CcEEEEecCCC
Q 011931 74 PRVIIMLVKAG 84 (474)
Q Consensus 74 ~dvIil~vp~~ 84 (474)
+|+||++++.+
T Consensus 84 AD~VVitagv~ 94 (450)
T 1s6y_A 84 ADFVTTQFRVG 94 (450)
T ss_dssp CSEEEECCCTT
T ss_pred CCEEEEcCCCC
Confidence 99999999975
No 262
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.84 E-value=8.7e-05 Score=72.32 Aligned_cols=106 Identities=9% Similarity=0.018 Sum_probs=80.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccC
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVD 389 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~ 389 (474)
+.++++++|+++|.+.++.|+.++|++.+.++. ++|.+++.++|+.+. .+|+.++........++..+ .
T Consensus 166 ~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~------Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~p-~--- 234 (297)
T 4gbj_A 166 DPGAANVIKLAGNFMIACSLEMMGEAFTMAEKN------GISRQSIYEMLTSTL-FAAPIFQNYGKLVASNTYEP-V--- 234 (297)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHTTT-TCSHHHHHHHHHHHHTCCCS-C---
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhhc-ccCchhhccCccccCCCCCC-c---
Confidence 357899999999999999999999999998753 499999999999885 57888887655544432211 0
Q ss_pred hHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011931 390 PEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 429 (474)
Q Consensus 390 ~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~ 429 (474)
-|.-. -...+++-+++.|-+.|+|+|....+.++|..
T Consensus 235 -~f~~~--l~~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~ 271 (297)
T 4gbj_A 235 -AFRFP--LGLKDINLTLQTASDVNAPMPFADIIRNRFIS 271 (297)
T ss_dssp -SSBHH--HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred -cchhH--HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 11111 12345688899999999999999988886653
No 263
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.83 E-value=5.2e-05 Score=77.27 Aligned_cols=120 Identities=18% Similarity=0.176 Sum_probs=75.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC---CcEEEEeCChHHHHHHHHhhhhcCCCCccc-------cCCHHHHHhhcCCCcE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG---FPISVYNRTTSKVDETVERAKKEGDLPLFG-------FRDPESFVNSIQKPRV 76 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G---~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-------~~s~~e~~~~l~~~dv 76 (474)
|+||+|||+|.+|+.++..|++.| .+|.++||++++.+++.+.....+..++.. ..+++++++.. ++|+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-KPQI 79 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-CCCE
Confidence 468999999999999999999998 389999999999988876542200000111 12233444331 2799
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCch--------hHHHHHHHHHHcCCeEEe
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYE--------NTERREKAMAELGLLYLG 131 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~--------~~~~~~~~l~~~g~~~v~ 131 (474)
||.++|+.. ...+++. .+..|..++|++...+. ....+.+.+++.|+.++.
T Consensus 80 Vin~ag~~~-~~~v~~a---~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~ 138 (405)
T 4ina_A 80 VLNIALPYQ-DLTIMEA---CLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALL 138 (405)
T ss_dssp EEECSCGGG-HHHHHHH---HHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEE
T ss_pred EEECCCccc-ChHHHHH---HHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEE
Confidence 999988653 3334333 24467778887554332 112445555666766543
No 264
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.81 E-value=0.0001 Score=74.29 Aligned_cols=112 Identities=14% Similarity=0.146 Sum_probs=78.3
Q ss_pred cCcEEEEc-ccHhHHH-HH----HHHHHCC-CcE----------EEEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHH
Q 011931 7 LTRIGLAG-LAVMGQN-LA----LNIAEKG-FPI----------SVYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFV 68 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~-lA----~~L~~~G-~~V----------~v~dr~~~~~~~l~~~~~~~~~~~~-~~~~s~~e~~ 68 (474)
.+|||||| +|.||.. .+ ..+.+.+ ..+ .++|+++++.+++.+... + ..++++++++
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~------~~~~~~~~~~ll 79 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFN------IARWTTDLDAAL 79 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTT------CCCEESCHHHHH
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhC------CCcccCCHHHHh
Confidence 46899999 9999998 66 6666554 222 499999999998877542 3 3678999998
Q ss_pred hhcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecC--CCCchhHHHHHHHHHHcCCeE
Q 011931 69 NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGG--NEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 69 ~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~ 129 (474)
+. ...|+|++|+|+....+-+. ..++.|+.|+--- .......+++.+..++.|+.+
T Consensus 80 ~~-~~iD~V~i~tp~~~h~~~~~----~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~ 137 (383)
T 3oqb_A 80 AD-KNDTMFFDAATTQARPGLLT----QAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKH 137 (383)
T ss_dssp HC-SSCCEEEECSCSSSSHHHHH----HHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred cC-CCCCEEEECCCchHHHHHHH----HHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 75 44799999999976654433 3345666555321 234456777777777777644
No 265
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.80 E-value=0.00013 Score=74.53 Aligned_cols=115 Identities=18% Similarity=0.223 Sum_probs=74.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhh-hh------------------cCCCCccccCCHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERA-KK------------------EGDLPLFGFRDPE 65 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~-~~------------------~~~~~~~~~~s~~ 65 (474)
+.||||||+|.||+.++..+.+. +.+|. ++|+++++.+++.+.. .. .+ ....+++.+
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g--~~~v~~D~e 100 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAG--KIAVTDDND 100 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTT--CEEEESCHH
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccC--CceEECCHH
Confidence 45899999999999999888754 55654 8899999988876532 10 00 134678999
Q ss_pred HHHhhcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchh---HHHHHHHHHHcCCeE
Q 011931 66 SFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYEN---TERREKAMAELGLLY 129 (474)
Q Consensus 66 e~~~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~---~~~~~~~l~~~g~~~ 129 (474)
++++. ...|+|++++|++..-. +-....++.|+-|+.... +.+ ..++.+..++.|+.|
T Consensus 101 eLL~d-~dIDaVviaTp~p~~H~---e~a~~AL~AGKHVv~~nk--~l~~~eg~eL~~~A~e~Gvvl 161 (446)
T 3upl_A 101 LILSN-PLIDVIIDATGIPEVGA---ETGIAAIRNGKHLVMMNV--EADVTIGPYLKAQADKQGVIY 161 (446)
T ss_dssp HHHTC-TTCCEEEECSCCHHHHH---HHHHHHHHTTCEEEECCH--HHHHHHHHHHHHHHHHHTCCE
T ss_pred HHhcC-CCCCEEEEcCCChHHHH---HHHHHHHHcCCcEEecCc--ccCHHHHHHHHHHHHHhCCee
Confidence 99874 34799999998752212 223345667888875432 222 234444445556544
No 266
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.79 E-value=6.7e-05 Score=73.85 Aligned_cols=113 Identities=12% Similarity=-0.000 Sum_probs=76.3
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--------hcCCCcE
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--------SIQKPRV 76 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~--------~l~~~dv 76 (474)
|+||||||+ |.||...+..|.+.+.++. ++|+++++. .+.+... ....+++.+++.+ .-+..|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~-----~~~~~~~~~~ll~~~~~l~~~~~~~vD~ 76 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-IIDSISP-----QSEFFTEFEFFLDHASNLKRDSATALDY 76 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCT-----TCEEESSHHHHHHHHHHHTTSTTTSCCE
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCC-----CCcEECCHHHHHHhhhhhhhccCCCCcE
Confidence 679999999 7999999999998888765 889998762 2222211 2567889999873 1135899
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCEE-EecC-CCCchhHHHHHHHHHHcCCeE
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDCI-IDGG-NEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~ii-Id~s-t~~~~~~~~~~~~l~~~g~~~ 129 (474)
|++++|+....+-+... +..|+-| ++-- +..+.+.+++.+..+++|+.+
T Consensus 77 V~I~tP~~~H~~~~~~a----l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 127 (318)
T 3oa2_A 77 VSICSPNYLHYPHIAAG----LRLGCDVICEKPLVPTPEMLDQLAVIERETDKRL 127 (318)
T ss_dssp EEECSCGGGHHHHHHHH----HHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCE
T ss_pred EEECCCcHHHHHHHHHH----HHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEE
Confidence 99999997655444333 3345544 4421 334466777777777777654
No 267
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.79 E-value=0.00015 Score=71.65 Aligned_cols=100 Identities=13% Similarity=0.186 Sum_probs=67.4
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhhc----CCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKKE----GDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~~----~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
..+||+|||+|.||.++|..|+.+|+ +|.++|+++++++.......+. ....+..+.++++ ++. +|+||+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~-~~~---aDiVvi 93 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV-TAN---SKLVII 93 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG-GTT---EEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH-hCC---CCEEEE
Confidence 45799999999999999999999997 8999999988776543322110 0001233445554 344 999999
Q ss_pred ecCCCh---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+...+. .++++.+.+..+ .|+.+++..||-
T Consensus 94 ~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNP 138 (331)
T 4aj2_A 94 TAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNP 138 (331)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred ccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCh
Confidence 874431 133333455554 577888888874
No 268
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.79 E-value=4.8e-05 Score=76.29 Aligned_cols=99 Identities=12% Similarity=0.174 Sum_probs=68.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCc-cccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPL-FGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~-~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.+|.|+|+|.+|..++..+...|.+|+++||++++.+.+.+.+.. .+ ....+.+++.+.+..+|+||.+++.+..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc----eeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 589999999999999999999999999999999998888765532 11 1112233332223349999999976431
Q ss_pred H-HH-HHHHHHhcccCCCEEEecCCC
Q 011931 87 V-DE-TIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v-~~-vl~~l~~~l~~g~iiId~st~ 110 (474)
. .. +.....+.++++.+|+|.+..
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCCeecCHHHHhhCCCCCEEEEEecC
Confidence 0 00 123344567788899988764
No 269
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.78 E-value=3.2e-05 Score=78.21 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=64.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc--ccC---------------C------
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF--GFR---------------D------ 63 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~--~~~---------------s------ 63 (474)
-.+|+|||+|.+|...+..+...|.+|+++|+++++.+.+.+.+.. .. ... +
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~-----~~~i~~~~~~~~~~~~~~~~~~s~~~~~~ 246 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGK-----FITVDDEAMKTAETAGGYAKEMGEEFRKK 246 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCE-----ECCC-----------------------CC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCe-----EEeecccccccccccccchhhcCHHHHhh
Confidence 3579999999999999999999999999999999887776553321 11 000 0
Q ss_pred ----HHHHHhhcCCCcEEEEecCCC-hhHHHHH-HHHHhcccCCCEEEecCC
Q 011931 64 ----PESFVNSIQKPRVIIMLVKAG-APVDETI-KTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 64 ----~~e~~~~l~~~dvIil~vp~~-~~v~~vl-~~l~~~l~~g~iiId~st 109 (474)
+.+++.. +|+||.+++.+ .....++ .+....+++|.+|||.+.
T Consensus 247 ~~~~l~~~~~~---aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 247 QAEAVLKELVK---TDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHHHHHHTT---CSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred hHHHHHHHhCC---CCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 3344444 99999988221 0111112 344566788999999874
No 270
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.78 E-value=6e-05 Score=73.35 Aligned_cols=116 Identities=10% Similarity=0.073 Sum_probs=77.8
Q ss_pred CCCCCCcCcEEEEcccHhHHHHHHHHHH----CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCc
Q 011931 1 MVEGKQLTRIGLAGLAVMGQNLALNIAE----KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPR 75 (474)
Q Consensus 1 m~~~~~~~~IgiIGlG~mG~~lA~~L~~----~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~d 75 (474)
|....+++||||||+|.||...+..|.+ .++++. ++|+++. .+.. ++. +.+++++++. ...|
T Consensus 1 M~~~~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-----a~~~------g~~-~~~~~ell~~-~~vD 67 (294)
T 1lc0_A 1 MITNSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-----GSLD------EVR-QISLEDALRS-QEID 67 (294)
T ss_dssp CCCCCCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-----CEET------TEE-BCCHHHHHHC-SSEE
T ss_pred CCCCCCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH-----HHHc------CCC-CCCHHHHhcC-CCCC
Confidence 5555667899999999999999988864 356655 7788641 1111 233 4789999873 2379
Q ss_pred EEEEecCCChhHHHHHHHHHhcccCCC-EEEec-CCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 76 VIIMLVKAGAPVDETIKTLSAYMEKGD-CIIDG-GNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 76 vIil~vp~~~~v~~vl~~l~~~l~~g~-iiId~-st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
+|++++|+..+.+.++. .++.|. ++++- -+....+.+++.+..+++|+.+..+.
T Consensus 68 ~V~i~tp~~~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~ 123 (294)
T 1lc0_A 68 VAYICSESSSHEDYIRQ----FLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEH 123 (294)
T ss_dssp EEEECSCGGGHHHHHHH----HHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEeCCcHhHHHHHHH----HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEE
Confidence 99999998765544433 344566 55653 34455677778887777887655443
No 271
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.77 E-value=6.7e-05 Score=73.63 Aligned_cols=113 Identities=17% Similarity=0.108 Sum_probs=76.5
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh-------hcCCCcEE
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN-------SIQKPRVI 77 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~-------~l~~~dvI 77 (474)
|+||||||+ |.||...+..+.+.+.+|. ++|+++++. .+.+... ....+++.+++.+ .-++.|+|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~-----~~~~~~~~~~ll~~~~~l~~~~~~vD~V 76 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-LVDSFFP-----EAEFFTEPEAFEAYLEDLRDRGEGVDYL 76 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCT-----TCEEESCHHHHHHHHHHHHHTTCCCSEE
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCC-----CCceeCCHHHHHHHhhhhcccCCCCcEE
Confidence 679999999 7899999999998888765 889998763 2222211 2567889999872 11458999
Q ss_pred EEecCCChhHHHHHHHHHhcccCCCEEE-ec-CCCCchhHHHHHHHHHHcCCeE
Q 011931 78 IMLVKAGAPVDETIKTLSAYMEKGDCII-DG-GNEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 78 il~vp~~~~v~~vl~~l~~~l~~g~iiI-d~-st~~~~~~~~~~~~l~~~g~~~ 129 (474)
++|+|+....+-+.. .++.|+-|+ +- -+......+++.+..+++|+.+
T Consensus 77 ~I~tP~~~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 126 (312)
T 3o9z_A 77 SIASPNHLHYPQIRM----ALRLGANALSEKPLVLWPEEIARLKELEARTGRRV 126 (312)
T ss_dssp EECSCGGGHHHHHHH----HHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCE
T ss_pred EECCCchhhHHHHHH----HHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEE
Confidence 999999755443333 344565444 32 1234456777777777777654
No 272
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.74 E-value=6.6e-05 Score=70.24 Aligned_cols=111 Identities=6% Similarity=0.021 Sum_probs=71.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHh-hcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVN-SIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~-~l~~~dvIil~vp~~ 84 (474)
.++|.|+|+|.+|..++..|.+.|+ |+++|+++++++.+. .+.. -+.. .++.+.+.+ .++++|.||++++++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~----~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGAN----FVHGDPTRVSDLEKANVRGARAVIVDLESD 82 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCE----EEESCTTCHHHHHHTTCTTCSEEEECCSCH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCe----EEEcCCCCHHHHHhcCcchhcEEEEcCCCc
Confidence 4579999999999999999999999 999999999887766 3211 0111 123333322 256799999999876
Q ss_pred hhHHHHHHHHHhcccCC-CEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011931 85 APVDETIKTLSAYMEKG-DCIIDGGNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~v 130 (474)
.....+...+..+.++ .+|+...+.. .. +.+...|+..+
T Consensus 83 -~~n~~~~~~a~~~~~~~~iia~~~~~~--~~----~~l~~~G~~~v 122 (234)
T 2aef_A 83 -SETIHCILGIRKIDESVRIIAEAERYE--NI----EQLRMAGADQV 122 (234)
T ss_dssp -HHHHHHHHHHHHHCSSSEEEEECSSGG--GH----HHHHHHTCSEE
T ss_pred -HHHHHHHHHHHHHCCCCeEEEEECCHh--HH----HHHHHCCCCEE
Confidence 3333333444455665 6666665532 22 23334566554
No 273
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.70 E-value=0.00019 Score=70.44 Aligned_cols=96 Identities=11% Similarity=0.112 Sum_probs=62.3
Q ss_pred CcEEEEcc-cHhHHHHHHHHHHCC--CcEEEEeCChHHHHHHHHhhhhcC-CCCccc---cCCHHHHHhhcCCCcEEEEe
Q 011931 8 TRIGLAGL-AVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKKEG-DLPLFG---FRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 8 ~~IgiIGl-G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~~~~-~~~~~~---~~s~~e~~~~l~~~dvIil~ 80 (474)
|||+|||+ |.+|.+++..|+..| .+|.++|+++.+ .......+.. ..++.. +++++++.+. +|+||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~--~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~---aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP--GVAADLSHIETRATVKGYLGPEQLPDCLKG---CDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH--HHHHHHTTSSSSCEEEEEESGGGHHHHHTT---CSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccH--HHHHHHhccCcCceEEEecCCCCHHHHhCC---CCEEEEC
Confidence 58999998 999999999999988 699999998722 1111111100 001232 2457776776 9999999
Q ss_pred cCCCh---------------hHHHHHHHHHhcccCCCEEEecCC
Q 011931 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 109 (474)
...+. .++++.+.+.+.. +..+|+..||
T Consensus 76 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sN 118 (314)
T 1mld_A 76 AGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISN 118 (314)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSS
T ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECC
Confidence 85432 2344445555544 6667777766
No 274
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.70 E-value=0.00012 Score=72.53 Aligned_cols=107 Identities=8% Similarity=0.118 Sum_probs=73.2
Q ss_pred cCcEEEEcccHhHH-HHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQ-NLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~-~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
++||||||+|.||. ..+..|.+. +++|. ++|+++++ . ++..+++++++++.....|+|++|+|+
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------~-------g~~~~~~~~~ll~~~~~vD~V~i~tp~ 91 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------E-------GVNSYTTIEAMLDAEPSIDAVSLCMPP 91 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------T-------TSEEESSHHHHHHHCTTCCEEEECSCH
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------c-------CCCccCCHHHHHhCCCCCCEEEEeCCc
Confidence 35899999999998 788888875 66765 78998653 1 256788999998753458999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecC--CCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGG--NEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~s--t~~~~~~~~~~~~l~~~g~~~v 130 (474)
....+-+. ..++.|.-|+--- +......+++.+..++.|+.+.
T Consensus 92 ~~H~~~~~----~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 136 (330)
T 4ew6_A 92 QYRYEAAY----KALVAGKHVFLEKPPGATLSEVADLEALANKQGASLF 136 (330)
T ss_dssp HHHHHHHH----HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHH----HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEE
Confidence 64433332 3344566554321 2334566677777777776544
No 275
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.69 E-value=6.3e-05 Score=72.98 Aligned_cols=111 Identities=16% Similarity=0.070 Sum_probs=76.1
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCC
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~--~l~~~dvIil~vp~ 83 (474)
.+||+|+|+ |.||..+++++.+.|++ .++..+|.+..+ .. . ++.++.+++|+.+ . +|++++++|+
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~-~v~~VnP~~~g~---~i--~---G~~vy~sl~el~~~~~---~Dv~Ii~vp~ 74 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTK-IVAGVTPGKGGM---EV--L---GVPVYDTVKEAVAHHE---VDASIIFVPA 74 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC---EE--T---TEEEESSHHHHHHHSC---CSEEEECCCH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCe-EEEEECCCCCCc---eE--C---CEEeeCCHHHHhhcCC---CCEEEEecCH
Confidence 468999998 99999999999999998 444444432100 00 1 3678889999987 6 9999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCch-hHHHHHHHHHHcCCeEEec
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAELGLLYLGM 132 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~v~~ 132 (474)
. .+.++++++... .. ..+|..+++.+. +..++.+..++.|+.++..
T Consensus 75 ~-~~~~~~~ea~~~-Gi-~~vVi~t~G~~~~~~~~l~~~a~~~gi~vigP 121 (288)
T 1oi7_A 75 P-AAADAALEAAHA-GI-PLIVLITEGIPTLDMVRAVEEIKALGSRLIGG 121 (288)
T ss_dssp H-HHHHHHHHHHHT-TC-SEEEECCSCCCHHHHHHHHHHHHHHTCEEEES
T ss_pred H-HHHHHHHHHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 5 666677665542 12 224445555544 3456666677788887753
No 276
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.69 E-value=8.6e-05 Score=73.20 Aligned_cols=129 Identities=12% Similarity=0.100 Sum_probs=76.7
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHC-------CCcEE-EEeCChHH------HHHHHHhhhhcCCCCcc-ccCCHHHHHhh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEK-------GFPIS-VYNRTTSK------VDETVERAKKEGDLPLF-GFRDPESFVNS 70 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~-------G~~V~-v~dr~~~~------~~~l~~~~~~~~~~~~~-~~~s~~e~~~~ 70 (474)
++.||+|||+|.||+.++..|.++ +.+|. ++|++++. .+++.+.....+ .+. ...+..+++..
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g--~~~~~~~d~~e~l~~ 80 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTG--RISDRAFSGPEDLMG 80 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHS--CSCSSBCCSGGGGTT
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcC--CCCcccCCHHHHhcC
Confidence 456899999999999999999874 34554 66887542 112221111000 011 01156666654
Q ss_pred cCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCc-hhHHHHHHHHHHcCCeEE-ecCCCCC
Q 011931 71 IQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWY-ENTERREKAMAELGLLYL-GMGVSGG 137 (474)
Q Consensus 71 l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~-~~~~~~~~~l~~~g~~~v-~~pvsgg 137 (474)
...|+|+.|+|+....+...+.+...+..|..||....... ....++.+..+++|+.|. .+.+.+|
T Consensus 81 -~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~g 148 (325)
T 3ing_A 81 -EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGG 148 (325)
T ss_dssp -SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTT
T ss_pred -CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeeccc
Confidence 34899999999763334444555666778999987765322 223345555566777553 4555444
No 277
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.68 E-value=0.00015 Score=69.90 Aligned_cols=110 Identities=18% Similarity=0.041 Sum_probs=74.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
..++.|+|+|.+|++++..|.+.|. +|+++||++++.+++.+.. . ..+.+++.+ + .+|+||.++|.+-
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~--------~-~~~~~~l~~-l-~~DivInaTp~Gm 190 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF--------K-VISYDELSN-L-KGDVIINCTPKGM 190 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS--------E-EEEHHHHTT-C-CCSEEEECSSTTS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc--------C-cccHHHHHh-c-cCCEEEECCccCc
Confidence 3579999999999999999999998 8999999999988776432 1 123333333 3 4999999998752
Q ss_pred h--HHH-HHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 86 P--VDE-TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 86 ~--v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
. .+. .+ -...++++.+|+|..-.+.. | .+.+..+++|...++
T Consensus 191 ~~~~~~~pi--~~~~l~~~~~v~DlvY~P~~-T-~ll~~A~~~G~~~~~ 235 (282)
T 3fbt_A 191 YPKEGESPV--DKEVVAKFSSAVDLIYNPVE-T-LFLKYARESGVKAVN 235 (282)
T ss_dssp TTSTTCCSS--CHHHHTTCSEEEESCCSSSS-C-HHHHHHHHTTCEEEC
T ss_pred cCCCccCCC--CHHHcCCCCEEEEEeeCCCC-C-HHHHHHHHCcCeEeC
Confidence 1 010 01 01235688999998765433 3 344455667776553
No 278
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.68 E-value=0.0002 Score=70.26 Aligned_cols=121 Identities=18% Similarity=0.228 Sum_probs=76.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCC---hHHHHHHHHhhhhcCCCCc--cccCCHHHHHhhcCCCcEEEEec
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT---TSKVDETVERAKKEGDLPL--FGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~---~~~~~~l~~~~~~~~~~~~--~~~~s~~e~~~~l~~~dvIil~v 81 (474)
.++.|+|+|.+|++++..|++.|. +|++++|+ .++.+++.+......+..+ ....+.+++.+.+..+|+||-++
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECc
Confidence 479999999999999999999998 89999999 8888887765321100001 12223333322222399999999
Q ss_pred CCChhHH--H-HHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 82 KAGAPVD--E-TIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 82 p~~~~v~--~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
|.+-.-. . .+. ....++++.+|+|..-.+..+ .+.+..+++|...++
T Consensus 235 p~Gm~~~~~~~p~~-~~~~l~~~~~V~DlvY~P~~T--~ll~~A~~~G~~~~~ 284 (315)
T 3tnl_A 235 GVGMKPFEGETLLP-SADMLRPELIVSDVVYKPTKT--RLLEIAEEQGCQTLN 284 (315)
T ss_dssp STTSTTSTTCCSCC-CGGGCCTTCEEEESCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred cCCCCCCCCCCCCC-cHHHcCCCCEEEEeccCCCCC--HHHHHHHHCCCeEeC
Confidence 9652100 0 010 123467889999987765433 344455667765543
No 279
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.66 E-value=7.6e-05 Score=73.96 Aligned_cols=115 Identities=7% Similarity=0.062 Sum_probs=73.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEE-EEeCCh-HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTT-SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~-~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
|+||||||+|.+|...+..| ..+.+|. ++|+++ ++.+++.+..... +.+...+++++++++. .+.|+|++|+|+.
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~-~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEM-NIKPKKYNNWWEMLEK-EKPDILVINTVFS 78 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTT-TCCCEECSSHHHHHHH-HCCSEEEECSSHH
T ss_pred ceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHc-CCCCcccCCHHHHhcC-CCCCEEEEeCCcc
Confidence 57999999999999888777 6677776 789987 4444444322110 0013578899999874 3479999999987
Q ss_pred hhHHHHHHHHHhcccCCCEEE-ec-CCCCchhHHHHHHHHHHcCCe
Q 011931 85 APVDETIKTLSAYMEKGDCII-DG-GNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiI-d~-st~~~~~~~~~~~~l~~~g~~ 128 (474)
...+-++. .++.|.-|+ +- -+....+.+++.+..++.|..
T Consensus 79 ~H~~~~~~----al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 79 LNGKILLE----ALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp HHHHHHHH----HHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred hHHHHHHH----HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 55443333 344565444 32 122335666777777766654
No 280
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.64 E-value=9.1e-05 Score=72.30 Aligned_cols=108 Identities=19% Similarity=0.049 Sum_probs=77.0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCc--
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLL-- 387 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll-- 387 (474)
+.++++++|+++|.+.++.|+.++|++.+.++. ++|.+.+.++|+.+. -+|+.++........ ..+..
T Consensus 165 ~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~------Gld~~~~~~vl~~~~-~~s~~~~~~~p~~~~---~~~~~~~ 234 (300)
T 3obb_A 165 PDGAGQVAKVCNNQLLAVLMIGTAEAMALGVAN------GLEAKVLAEIMRRSS-GGNWALEVYNPWPGV---MENAPAS 234 (300)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHTST-TCCHHHHHCCCSTTT---STTSGGG
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHhCc-ccchHHHhhccccch---hhhcccc
Confidence 458899999999999999999999999998763 499999999999875 467766532110000 00001
Q ss_pred --cChHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011931 388 --VDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 429 (474)
Q Consensus 388 --~~~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~ 429 (474)
.++.|.-. -...+++.+++.|.+.|+|+|..+.+..+|..
T Consensus 235 ~~~~~~f~~~--l~~KDl~l~~~~A~~~g~~~p~~~~a~~~~~~ 276 (300)
T 3obb_A 235 RDYSGGFMAQ--LMAKDLGLAQEAAQASASSTPMGSLALSLYRL 276 (300)
T ss_dssp GTTCSSSBHH--HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred ccCCccchHH--HHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 01222221 22446788999999999999999999887654
No 281
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.63 E-value=0.00017 Score=71.24 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=60.9
Q ss_pred CcCcEEEEc-ccHhHHHHHHHHHHCC--CcEEEEeCChHHHH--HHHHhhhhcCCCCccc---cCCHHHHHhhcCCCcEE
Q 011931 6 QLTRIGLAG-LAVMGQNLALNIAEKG--FPISVYNRTTSKVD--ETVERAKKEGDLPLFG---FRDPESFVNSIQKPRVI 77 (474)
Q Consensus 6 ~~~~IgiIG-lG~mG~~lA~~L~~~G--~~V~v~dr~~~~~~--~l~~~~~~~~~~~~~~---~~s~~e~~~~l~~~dvI 77 (474)
++|||+||| +|.+|.+++..|+..| ++|.++|++++... ++..... . .++.. +++++++++. +|+|
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~-~--~~v~~~~~t~d~~~al~g---aDvV 80 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDT-G--AVVRGFLGQQQLEAALTG---MDLI 80 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCS-S--CEEEEEESHHHHHHHHTT---CSEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccc-c--ceEEEEeCCCCHHHHcCC---CCEE
Confidence 457999999 8999999999999998 79999999876211 1221110 0 01222 2345566665 9999
Q ss_pred EEecCCCh---------------hHHHHHHHHHhcccCCCEEEecCC
Q 011931 78 IMLVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 78 il~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 109 (474)
|++.+.+. .++++++.+...- +..+|+..||
T Consensus 81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SN 126 (326)
T 1smk_A 81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISN 126 (326)
T ss_dssp EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCS
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECC
Confidence 99986432 1333444444433 5667766655
No 282
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.61 E-value=0.0003 Score=72.07 Aligned_cols=118 Identities=16% Similarity=0.264 Sum_probs=76.1
Q ss_pred CcEEEEcccHhHHHHHHHHHH----------CCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcE
Q 011931 8 TRIGLAGLAVMGQNLALNIAE----------KGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRV 76 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~----------~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dv 76 (474)
.+|||||+|.||+.++..|.+ .+.+|. ++|+++++.+.+.. ....+++++++++. ...|+
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~--------~~~~~~d~~ell~d-~diDv 81 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG--------GLPLTTNPFDVVDD-PEIDI 81 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT--------TCCEESCTHHHHTC-TTCCE
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc--------cCcccCCHHHHhcC-CCCCE
Confidence 479999999999999987764 244554 78999988766531 13567899999874 34799
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCEEEecCCCC-chhHHHHHHHHHHcCCeE-EecCCCCC
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW-YENTERREKAMAELGLLY-LGMGVSGG 137 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~g~~~-v~~pvsgg 137 (474)
|++++|+.....+.+ ...+..|..|+...... .....++.+..+++|+.+ +.+.+.++
T Consensus 82 Vve~tp~~~~h~~~~---~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~g 141 (444)
T 3mtj_A 82 VVELIGGLEPARELV---MQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGG 141 (444)
T ss_dssp EEECCCSSTTHHHHH---HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTT
T ss_pred EEEcCCCchHHHHHH---HHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCC
Confidence 999999632333333 34466788887543310 112334555556678776 34545443
No 283
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.61 E-value=0.00013 Score=70.98 Aligned_cols=109 Identities=15% Similarity=0.087 Sum_probs=76.2
Q ss_pred CcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCCC
Q 011931 8 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKAG 84 (474)
Q Consensus 8 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~--~l~~~dvIil~vp~~ 84 (474)
.+|.|+|+ |.||..+++++.+.|++ .++..+|.+..+ .. .++.++.+++|+.+ . +|++++++|+.
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g~---~i-----~G~~vy~sl~el~~~~~---~Dv~ii~vp~~ 81 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGGQ---NV-----HGVPVFDTVKEAVKETD---ANASVIFVPAP 81 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTTC---EE-----TTEEEESSHHHHHHHHC---CCEEEECCCHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCCc---eE-----CCEeeeCCHHHHhhcCC---CCEEEEccCHH
Confidence 46888898 99999999999999998 666666653210 00 13678889999987 6 99999999985
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCCch-hHHHHHHHHHHcCCeEEe
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAELGLLYLG 131 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~v~ 131 (474)
.+.+++++.... .. ..+|..+++.+. +..++.+..++.|+.+++
T Consensus 82 -~~~~~v~ea~~~-Gi-~~vVi~t~G~~~~~~~~l~~~A~~~gi~viG 126 (294)
T 2yv1_A 82 -FAKDAVFEAIDA-GI-ELIVVITEHIPVHDTMEFVNYAEDVGVKIIG 126 (294)
T ss_dssp -HHHHHHHHHHHT-TC-SEEEECCSCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred -HHHHHHHHHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 666666665542 11 224445555543 345666777778888775
No 284
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.59 E-value=0.00012 Score=70.90 Aligned_cols=115 Identities=15% Similarity=0.099 Sum_probs=73.8
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCC----CccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDL----PLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~----~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
+++.|+|+|.+|.++|..|++.| +|+++||++++.+++.+.....+.. .+.. .+.. +.+.++|+||.+++.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~---~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF-SGLD---VDLDGVDIIINATPI 203 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE-ECTT---CCCTTCCEEEECSCT
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEE-eeHH---HhhCCCCEEEECCCC
Confidence 57999999999999999999999 9999999999888776543210000 0011 1222 223459999999987
Q ss_pred ChhH--HHH-HHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011931 84 GAPV--DET-IKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 84 ~~~v--~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v 130 (474)
+..- +.. +. -...++++.+++|++.. |..+ .+.+..+++|..++
T Consensus 204 ~~~~~~~~~~~~-~~~~l~~~~~v~Dv~y~-p~~t-~ll~~a~~~G~~~~ 250 (287)
T 1nvt_A 204 GMYPNIDVEPIV-KAEKLREDMVVMDLIYN-PLET-VLLKEAKKVNAKTI 250 (287)
T ss_dssp TCTTCCSSCCSS-CSTTCCSSSEEEECCCS-SSSC-HHHHHHHTTTCEEE
T ss_pred CCCCCCCCCCCC-CHHHcCCCCEEEEeeeC-CccC-HHHHHHHHCCCEEe
Confidence 5321 000 10 02356789999999875 4333 34455566676543
No 285
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.56 E-value=0.00011 Score=70.61 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=65.2
Q ss_pred CcCcEEEEc-ccHhHHHHHHHHHHC-CCcEE-EEeCChHHH-----HHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011931 6 QLTRIGLAG-LAVMGQNLALNIAEK-GFPIS-VYNRTTSKV-----DETVERAKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (474)
Q Consensus 6 ~~~~IgiIG-lG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~-----~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvI 77 (474)
+|+||+|+| +|.||+.+++.+.+. ++++. ++|++++.. .++.. .. .++..+++++++++. +|+|
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g--~~---~gv~v~~dl~~ll~~---~DVV 77 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLG--KQ---TGVALTDDIERVCAE---ADYL 77 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTT--CC---CSCBCBCCHHHHHHH---CSEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhC--CC---CCceecCCHHHHhcC---CCEE
Confidence 367999999 899999999998865 66766 479875321 01110 00 035667899998887 9999
Q ss_pred EEecCCChhHHHHHHHHHhcccCCCEEEecCCCCch
Q 011931 78 IMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYE 113 (474)
Q Consensus 78 il~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~ 113 (474)
|-++++. .+.+.+.. .++.|.-+|..+|+...
T Consensus 78 IDfT~p~-a~~~~~~~---al~~G~~vVigTTG~s~ 109 (272)
T 4f3y_A 78 IDFTLPE-GTLVHLDA---ALRHDVKLVIGTTGFSE 109 (272)
T ss_dssp EECSCHH-HHHHHHHH---HHHHTCEEEECCCCCCH
T ss_pred EEcCCHH-HHHHHHHH---HHHcCCCEEEECCCCCH
Confidence 9998764 44444443 34467777777777643
No 286
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.56 E-value=0.0002 Score=70.93 Aligned_cols=94 Identities=10% Similarity=0.135 Sum_probs=62.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhh-h-cCCC----------CccccCCHHHHHhhcC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAK-K-EGDL----------PLFGFRDPESFVNSIQ 72 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~-~-~~~~----------~~~~~~s~~e~~~~l~ 72 (474)
|+||||+|+|.||+.+++.|.+. +.+|. ++|+++++...+.+... . .+.+ .+....+++++...
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~-- 79 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK-- 79 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT--
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccC--
Confidence 46999999999999999999876 34654 67888877776665321 0 0000 12345678888765
Q ss_pred CCcEEEEecCCChhHHHHHHHHHhcccCCCEEEec
Q 011931 73 KPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDG 107 (474)
Q Consensus 73 ~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~ 107 (474)
+|+|++|+|.....+.. . .+++.|..||..
T Consensus 80 -vDvV~~aTp~~~h~~~a-~---~~l~aGk~Vi~s 109 (334)
T 2czc_A 80 -VDIIVDATPGGIGAKNK-P---LYEKAGVKAIFQ 109 (334)
T ss_dssp -CSEEEECCSTTHHHHHH-H---HHHHHTCEEEEC
T ss_pred -CCEEEECCCccccHHHH-H---HHHHcCCceEee
Confidence 99999999987444333 2 334457777743
No 287
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.52 E-value=0.00048 Score=66.77 Aligned_cols=98 Identities=11% Similarity=0.098 Sum_probs=62.6
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC--cEEEEeCChHHHHHHHHhhhh----cC-CCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF--PISVYNRTTSKVDETVERAKK----EG-DLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~~----~~-~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
|||+|||+|.+|.++|..|+.++. ++.+||+++++++-......+ .. ..++....+.+++ +. +|+||++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~-~~---aDvVvit 76 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLL-KG---SEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGG-TT---CSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHh-CC---CCEEEEe
Confidence 799999999999999999988875 899999998765433221111 00 0012334455443 33 9999998
Q ss_pred cCCC----hh-----------HHHHHHHHHhcccCCCEEEecCCC
Q 011931 81 VKAG----AP-----------VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 81 vp~~----~~-----------v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
...+ .. ++++.+++..+ .|+.+|+..||-
T Consensus 77 AG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvsNP 120 (294)
T 2x0j_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNP 120 (294)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSS
T ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEecCc
Confidence 7432 11 23333455554 467788888874
No 288
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.50 E-value=0.00053 Score=68.15 Aligned_cols=108 Identities=16% Similarity=0.197 Sum_probs=72.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++|+|+|+|++|..+|+.|.+.|.+|+++|+++++ .+..+.. +.+.. +.+++... .||+++-|-... .+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~------ga~~v-~~~ell~~--~~DIliP~A~~~-~I 244 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVAL------GHTAV-ALEDVLST--PCDVFAPCAMGG-VI 244 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHT------TCEEC-CGGGGGGC--CCSEEEECSCSC-CB
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhc------CCEEe-ChHHhhcC--ccceecHhHHHh-hc
Confidence 57999999999999999999999999999999876 3333322 12222 45565541 399987553222 11
Q ss_pred HHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
. .+.++.++ .++|++.+|......+ ..+.+.++|+.++.
T Consensus 245 ~---~~~~~~lk-~~iVie~AN~p~t~~e-A~~~L~~~gIlv~P 283 (355)
T 1c1d_A 245 T---TEVARTLD-CSVVAGAANNVIADEA-ASDILHARGILYAP 283 (355)
T ss_dssp C---HHHHHHCC-CSEECCSCTTCBCSHH-HHHHHHHTTCEECC
T ss_pred C---HHHHhhCC-CCEEEECCCCCCCCHH-HHHHHHhCCEEEEC
Confidence 1 12233453 6899999988654323 35777888876653
No 289
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.50 E-value=0.00012 Score=75.72 Aligned_cols=86 Identities=12% Similarity=0.218 Sum_probs=59.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~--~l~~~dvIil~vp~~ 84 (474)
.|||-|+|+|.+|..+|+.|.+.||+|++.|+++++++++.+...-. -+....+..+... .+++||++|.+++++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~---~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLR---VVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCE---EEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcE---EEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 47999999999999999999999999999999999999887653100 1222222223222 256699888777664
Q ss_pred hhHHHHHHHHHh
Q 011931 85 APVDETIKTLSA 96 (474)
Q Consensus 85 ~~v~~vl~~l~~ 96 (474)
.+.-+.-.++.
T Consensus 80 -e~Nl~~~~~Ak 90 (461)
T 4g65_A 80 -ETNMAACQVAF 90 (461)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHHHHH
Confidence 44433333333
No 290
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.47 E-value=0.00021 Score=68.50 Aligned_cols=71 Identities=10% Similarity=0.078 Sum_probs=51.6
Q ss_pred CCcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 5 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 5 ~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
.+||+|.|+|+|.+|+.++..|+++|++|++.+|++++...+...+.. . ...++.++ + +.++|+||.+...
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~-~~~D~~d~-~-~~~~d~vi~~a~~ 73 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAE-----P-LLWPGEEP-S-LDGVTHLLISTAP 73 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEE-----E-EESSSSCC-C-CTTCCEEEECCCC
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCe-----E-EEeccccc-c-cCCCCEEEECCCc
Confidence 456899999999999999999999999999999999887776543311 1 11222221 1 4559999998754
No 291
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.45 E-value=0.0008 Score=66.43 Aligned_cols=101 Identities=13% Similarity=0.164 Sum_probs=64.6
Q ss_pred CcCcEEEEcc-cHhHHHHHHHHHHCCC-------cEEEEeCC----hHHHHHHHHhhhhcC-CC--CccccCCHHHHHhh
Q 011931 6 QLTRIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRT----TSKVDETVERAKKEG-DL--PLFGFRDPESFVNS 70 (474)
Q Consensus 6 ~~~~IgiIGl-G~mG~~lA~~L~~~G~-------~V~v~dr~----~~~~~~l~~~~~~~~-~~--~~~~~~s~~e~~~~ 70 (474)
+.|||+|+|+ |.+|.+++..|+..|+ +|.++|++ +++++.......+.. .+ ++..+++..++++.
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKD 83 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCC
Confidence 3469999997 9999999999999886 89999999 555543222111100 00 23344666776666
Q ss_pred cCCCcEEEEecCCCh----h-----------HHHHHHHHHhcccCCCEEEecCC
Q 011931 71 IQKPRVIIMLVKAGA----P-----------VDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 71 l~~~dvIil~vp~~~----~-----------v~~vl~~l~~~l~~g~iiId~st 109 (474)
+|+||++...+. . ++++++.+.....+..+||..||
T Consensus 84 ---aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 84 ---ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp ---CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred ---CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 999999875331 1 22333444443336668888886
No 292
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.45 E-value=4.1e-05 Score=70.87 Aligned_cols=79 Identities=23% Similarity=0.348 Sum_probs=51.1
Q ss_pred cCcEEEEcccHhHHHHHHH--HHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQNLALN--IAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~--L~~~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
.++|+|||+|.+|..++.. +...|+++. ++|.++++....... .++...++++++++. .|+|++|+|+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~g------v~V~~~~dl~eli~~---~D~ViIAvPs 155 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGG------VPVYNLDDLEQHVKD---ESVAILTVPA 155 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETT------EEEEEGGGHHHHCSS---CCEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcC------CeeechhhHHHHHHh---CCEEEEecCc
Confidence 3689999999999999994 445688766 779999876432211 123345667777765 5999999997
Q ss_pred ChhHHHHHHHHH
Q 011931 84 GAPVDETIKTLS 95 (474)
Q Consensus 84 ~~~v~~vl~~l~ 95 (474)
. ...++.+.+.
T Consensus 156 ~-~~~ei~~~l~ 166 (215)
T 2vt3_A 156 V-AAQSITDRLV 166 (215)
T ss_dssp H-HHHHHHHHHH
T ss_pred h-hHHHHHHHHH
Confidence 5 4445555544
No 293
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.44 E-value=0.00028 Score=72.79 Aligned_cols=90 Identities=12% Similarity=0.062 Sum_probs=69.8
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++++|+|+|.+|..+|+.|+..|.+|.++|+++.+..+....+ + ...+.+++... +|+|+.+......+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g-------~-dv~~lee~~~~---aDvVi~atG~~~vl 334 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEG-------L-QVLTLEDVVSE---ADIFVTTTGNKDII 334 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------C-EECCGGGTTTT---CSEEEECSSCSCSB
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhC-------C-ccCCHHHHHHh---cCEEEeCCCChhhh
Confidence 4699999999999999999999999999999998877666543 2 23467777766 99999887654322
Q ss_pred HHHHHHHHhcccCCCEEEecCCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
. ......++++.+|++.+...
T Consensus 335 ~---~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 335 M---LDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp C---HHHHTTSCTTEEEEESSSTT
T ss_pred h---HHHHHhcCCCeEEEEcCCCC
Confidence 2 33456788999999998753
No 294
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.44 E-value=0.0002 Score=70.78 Aligned_cols=125 Identities=14% Similarity=0.085 Sum_probs=74.0
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC--------CCcEE-EEeCChHHHHH------HHHhhhhcCCCCcc-ccC---CHHHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK--------GFPIS-VYNRTTSKVDE------TVERAKKEGDLPLF-GFR---DPESF 67 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~--------G~~V~-v~dr~~~~~~~------l~~~~~~~~~~~~~-~~~---s~~e~ 67 (474)
++||||||+|.||+.++..|.+. +.+|. ++|+++++.++ +.+..... .+. .++ +++++
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~l 82 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKG---SLDSLEYESISASEA 82 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTT---CGGGCCSEECCHHHH
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccC---CcccccCCCCCHHHH
Confidence 36899999999999999998764 24554 77998765432 22211100 121 344 88888
Q ss_pred HhhcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCC-chhHHHHHHHHHHcCCeEE-ecCCCC
Q 011931 68 VNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW-YENTERREKAMAELGLLYL-GMGVSG 136 (474)
Q Consensus 68 ~~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~g~~~v-~~pvsg 136 (474)
+ . ...|+|+.|+|+....+...+-+...|..|..|+...... .....++.+..+++|+.|. ++.+.+
T Consensus 83 l-~-~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea~vg~ 151 (331)
T 3c8m_A 83 L-A-RDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEATVAG 151 (331)
T ss_dssp H-H-SSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSST
T ss_pred h-C-CCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 8 4 3489999999984111122233445567888888654321 1223445555566776543 344443
No 295
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.40 E-value=0.00044 Score=67.26 Aligned_cols=113 Identities=15% Similarity=0.057 Sum_probs=75.8
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
..+|.|+|+ |.||..++++|.+.|++ .++..+|.+..+ .. . ++.++.+++|+.+....+|++++++|+.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~g~---~i--~---G~~vy~sl~el~~~~~~~DvaIi~vp~~- 82 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKGGS---EV--H---GVPVYDSVKEALAEHPEINTSIVFVPAP- 82 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC---EE--T---TEEEESSHHHHHHHCTTCCEEEECCCGG-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCCCc---eE--C---CEeeeCCHHHHhhcCCCCCEEEEecCHH-
Confidence 346888898 99999999999999998 555555543200 00 1 3678889999876311289999999986
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCch-hHHHHHHHHHHcCCeEEe
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAELGLLYLG 131 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~g~~~v~ 131 (474)
.+.++++++... .. ..+|-.+++.+. +..++.+.+++.|+.+++
T Consensus 83 ~~~~~v~ea~~~-Gi-~~vVi~t~G~~~~~~~~l~~~A~~~gi~viG 127 (297)
T 2yv2_A 83 FAPDAVYEAVDA-GI-RLVVVITEGIPVHDTMRFVNYARQKGATIIG 127 (297)
T ss_dssp GHHHHHHHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 666677666553 12 224445555544 345666777778888775
No 296
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.38 E-value=0.00071 Score=66.20 Aligned_cols=117 Identities=14% Similarity=0.150 Sum_probs=76.7
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCC---hHHHHHHHHhhhhcCCCCccc--cCCH---HHHHhhcCCCcEEE
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT---TSKVDETVERAKKEGDLPLFG--FRDP---ESFVNSIQKPRVII 78 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~---~~~~~~l~~~~~~~~~~~~~~--~~s~---~e~~~~l~~~dvIi 78 (474)
.++.|+|+|.+|++++..|++.|. +|++++|+ .++.+++.+......+..+.. ..+. .+.+.. +|+||
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~---~DiII 225 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS---ADILT 225 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH---CSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC---ceEEE
Confidence 579999999999999999999998 89999999 888888776432110000111 2233 344555 99999
Q ss_pred EecCCChh-HHHHHHHH---HhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 79 MLVKAGAP-VDETIKTL---SAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 79 l~vp~~~~-v~~vl~~l---~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
-++|.+-. ... ..+ ...+.++.+|+|..-.+..+ .+.+..+++|...++
T Consensus 226 NaTp~Gm~~~~~--~~~~~~~~~l~~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~ 278 (312)
T 3t4e_A 226 NGTKVGMKPLEN--ESLIGDVSLLRPELLVTECVYNPHMT--KLLQQAQQAGCKTID 278 (312)
T ss_dssp ECSSTTSTTSTT--CCSCCCGGGSCTTCEEEECCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred ECCcCCCCCCCC--CcccCCHHHcCCCCEEEEeccCCCCC--HHHHHHHHCCCeEEC
Confidence 99997621 010 011 13467889999987665333 344445667776553
No 297
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.34 E-value=0.00026 Score=69.12 Aligned_cols=109 Identities=13% Similarity=0.036 Sum_probs=76.3
Q ss_pred CcEEEE-cc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCC
Q 011931 8 TRIGLA-GL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiI-Gl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~--~l~~~dvIil~vp~ 83 (474)
.+|+|| |+ |.+|...+++|.+.|++ .+|+.+|.+.. +.. . ++.++.+++|+.+ . +|++++++|+
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G~~-~v~~VnP~~~g---~~i--~---G~~vy~sl~el~~~~~---vD~avI~vP~ 81 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYGTN-LVGGTTPGKGG---KTH--L---GLPVFNTVKEAKEQTG---ATASVIYVPP 81 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT---CEE--T---TEEEESSHHHHHHHHC---CCEEEECCCH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCCCc-EEEEeCCCcCc---ceE--C---CeeeechHHHhhhcCC---CCEEEEecCH
Confidence 468999 98 99999999999999999 55666664311 000 1 3678889999987 6 9999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCch-hHHHHHHHHHHc-CCeEEe
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYE-NTERREKAMAEL-GLLYLG 131 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~-~~~~~~~~l~~~-g~~~v~ 131 (474)
. .+.++++++... .- ..++..+.+.+. +..++.+.+++. |+.+++
T Consensus 82 ~-~~~~~~~e~i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~liG 128 (305)
T 2fp4_A 82 P-FAAAAINEAIDA-EV-PLVVCITEGIPQQDMVRVKHRLLRQGKTRLIG 128 (305)
T ss_dssp H-HHHHHHHHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHTTCSSCEEEC
T ss_pred H-HHHHHHHHHHHC-CC-CEEEEECCCCChHHHHHHHHHHHhcCCcEEEe
Confidence 5 667777666543 12 344445555443 344666777778 888775
No 298
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.34 E-value=0.0003 Score=69.00 Aligned_cols=94 Identities=12% Similarity=0.147 Sum_probs=62.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHH--CCCcE-EEEeCChHH-HHHHHHhhhhcCCCCcc-ccCCHHHHHhh--cCCCcEEEE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAE--KGFPI-SVYNRTTSK-VDETVERAKKEGDLPLF-GFRDPESFVNS--IQKPRVIIM 79 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~--~G~~V-~v~dr~~~~-~~~l~~~~~~~~~~~~~-~~~s~~e~~~~--l~~~dvIil 79 (474)
++||||||+|.+|..++..|.+ .+.++ .++|+++++ ..++.+... +. ...+.+++++. .+..|+|++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g------~~~~~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMG------VTTTYAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTT------CCEESSHHHHHHHSGGGGGEEEEEE
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcC------CCcccCCHHHHHhccCCCCCcEEEE
Confidence 4689999999999999999966 34554 478999887 555554331 22 23456676542 133899999
Q ss_pred ecCCChhHHHHHHHHHhcccC--CCEEEecCCC
Q 011931 80 LVKAGAPVDETIKTLSAYMEK--GDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~--g~iiId~st~ 110 (474)
++|+.. ..+.... .+.. |..|++.+..
T Consensus 78 atp~~~-h~~~a~~---al~a~~Gk~Vi~ekp~ 106 (312)
T 1nvm_B 78 ATSASA-HVQNEAL---LRQAKPGIRLIDLTPA 106 (312)
T ss_dssp CSCHHH-HHHHHHH---HHHHCTTCEEEECSTT
T ss_pred CCChHH-HHHHHHH---HHHhCCCCEEEEcCcc
Confidence 999643 3333322 2334 8889887754
No 299
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.33 E-value=0.001 Score=65.61 Aligned_cols=114 Identities=14% Similarity=0.094 Sum_probs=69.7
Q ss_pred CcCcEEEEcccHhHHH-HHHHHHHCCCcEEEEeCCh--HHHHHHHHhhhhcCCCCccccCCHHHHH-hhcCCCcEEEEe-
Q 011931 6 QLTRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTT--SKVDETVERAKKEGDLPLFGFRDPESFV-NSIQKPRVIIML- 80 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~--~~~~~l~~~~~~~~~~~~~~~~s~~e~~-~~l~~~dvIil~- 80 (474)
.+++|.|||+|.+|.+ +|+.|.+.|++|+++|+++ ...+++.+.+. .+..-.+++++. .. +|+||.+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi-----~v~~g~~~~~l~~~~---~d~vV~Sp 74 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGI-----DVYEGFDAAQLDEFK---ADVYVIGN 74 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTC-----EEEESCCGGGGGSCC---CSEEEECT
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCC-----EEECCCCHHHcCCCC---CCEEEECC
Confidence 3578999999999995 9999999999999999864 34555655442 122223444443 34 8999985
Q ss_pred -cCCCh-hHHHHHH---------HHH-hcc-cCCC-EEEecCCCCchhHHHHHHHHHHcCC
Q 011931 81 -VKAGA-PVDETIK---------TLS-AYM-EKGD-CIIDGGNEWYENTERREKAMAELGL 127 (474)
Q Consensus 81 -vp~~~-~v~~vl~---------~l~-~~l-~~g~-iiId~st~~~~~~~~~~~~l~~~g~ 127 (474)
+|++. .+....+ +++ ..+ +... |-|-.|+++-.++.-+...|+..|.
T Consensus 75 gi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~ 135 (326)
T 3eag_A 75 VAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGL 135 (326)
T ss_dssp TCCTTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred CcCCCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 44332 2332221 222 222 2223 4466666665555555667777664
No 300
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.32 E-value=0.00026 Score=66.85 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=71.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.|+|+++|+|.||+.+++. . ++++. +|+ ++..++ ++..++++++++.. +|+|+.|-+..
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k~gel----------gv~a~~d~d~lla~---pD~VVe~A~~~- 71 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RISKDI----------PGVVRLDEFQVPSD---VSTVVECASPE- 71 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SSCCCC----------SSSEECSSCCCCTT---CCEEEECSCHH-
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cccccc----------CceeeCCHHHHhhC---CCEEEECCCHH-
Confidence 4899999999999999998 4 88874 777 332222 14567788888765 99999998653
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchh---HHHHHHHHHHcCCeE-EecCCCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYEN---TERREKAMAELGLLY-LGMGVSGG 137 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~---~~~~~~~l~~~g~~~-v~~pvsgg 137 (474)
++++ .+.+.|..|.-++.+|.+...+ .+++.+..++.|..+ +..+..+|
T Consensus 72 av~e---~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGAi~G 124 (253)
T 1j5p_A 72 AVKE---YSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIGG 124 (253)
T ss_dssp HHHH---HHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCCC
T ss_pred HHHH---HHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCcccc
Confidence 4443 3455677888888888763222 233444444445544 44555555
No 301
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.31 E-value=4.1e-05 Score=74.93 Aligned_cols=91 Identities=14% Similarity=0.077 Sum_probs=62.8
Q ss_pred cCcEEEEcccHh-HHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcc-c-----c--CCHHHHHhhcCCCcEE
Q 011931 7 LTRIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLF-G-----F--RDPESFVNSIQKPRVI 77 (474)
Q Consensus 7 ~~~IgiIGlG~m-G~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~-~-----~--~s~~e~~~~l~~~dvI 77 (474)
-.++.|||.|.| |..+|+.|+..|..|+++||+..+..+..+.... ... . + .++++.+.. +|+|
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~----~~~~~t~~~~t~~~~L~e~l~~---ADIV 249 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKL----NKHHVEDLGEYSEDLLKKCSLD---SDVV 249 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSC----CCCEEEEEEECCHHHHHHHHHH---CSEE
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhh----hcccccccccccHhHHHHHhcc---CCEE
Confidence 357999999976 9999999999999999999984332111111000 011 1 1 456777777 9999
Q ss_pred EEecCCChh-HHHHHHHHHhcccCCCEEEecCCC
Q 011931 78 IMLVKAGAP-VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 78 il~vp~~~~-v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
|.+++.+.. +. ...+++|.+|||.+..
T Consensus 250 IsAtg~p~~vI~------~e~vk~GavVIDVgi~ 277 (320)
T 1edz_A 250 ITGVPSENYKFP------TEYIKEGAVCINFACT 277 (320)
T ss_dssp EECCCCTTCCBC------TTTSCTTEEEEECSSS
T ss_pred EECCCCCcceeC------HHHcCCCeEEEEcCCC
Confidence 999987642 11 1346789999999875
No 302
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.31 E-value=0.00054 Score=65.32 Aligned_cols=74 Identities=16% Similarity=0.379 Sum_probs=59.7
Q ss_pred CcEEEEcccH-hHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++.|||.|. +|.++|..|...|..|+++++. +.++++.+.. +|+||.+++.+..
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~---------------------t~~L~~~~~~---ADIVI~Avg~p~~ 206 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK---------------------TKDIGSMTRS---SKIVVVAVGRPGF 206 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------------------CSCHHHHHHH---SSEEEECSSCTTC
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC---------------------cccHHHhhcc---CCEEEECCCCCcc
Confidence 4799999985 8999999999999999999863 2356777777 9999999987643
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+. ...+++|.+|||.+...
T Consensus 207 I~------~~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 207 LN------REMVTPGSVVIDVGINY 225 (276)
T ss_dssp BC------GGGCCTTCEEEECCCEE
T ss_pred cc------HhhccCCcEEEEeccCc
Confidence 22 24578999999998753
No 303
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.31 E-value=0.0016 Score=63.53 Aligned_cols=98 Identities=10% Similarity=0.096 Sum_probs=59.7
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCC--cEEEEeC--ChHHHHHHHHhhhhc--CCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGF--PISVYNR--TTSKVDETVERAKKE--GDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~--~V~v~dr--~~~~~~~l~~~~~~~--~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
|||+|+| +|.+|.+++..|+..|+ ++.++|+ ++++++.......+. ...++....+..++.+. +|+||++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~---aDvVi~~ 77 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAG---SDVVVIT 77 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTT---CSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCC---CCEEEEc
Confidence 6899999 99999999999998886 6889999 876654322211110 00012222222444444 9999999
Q ss_pred cCCCh---------------hHHHHHHHHHhcccCCCEEEecCC
Q 011931 81 VKAGA---------------PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 81 vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st 109 (474)
...+. .++++++.+... .+..+|+..||
T Consensus 78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN 120 (303)
T 1o6z_A 78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN 120 (303)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 85432 122333444443 45677776655
No 304
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.28 E-value=0.00073 Score=62.13 Aligned_cols=73 Identities=14% Similarity=0.304 Sum_probs=50.8
Q ss_pred cCc-EEEEc-ccHhHHHHHHHHH-HCCCcEEEEeCChH-HHHHHHHhhhhcCCCCccc----cCCHHHHHhhcCCCcEEE
Q 011931 7 LTR-IGLAG-LAVMGQNLALNIA-EKGFPISVYNRTTS-KVDETVERAKKEGDLPLFG----FRDPESFVNSIQKPRVII 78 (474)
Q Consensus 7 ~~~-IgiIG-lG~mG~~lA~~L~-~~G~~V~v~dr~~~-~~~~l~~~~~~~~~~~~~~----~~s~~e~~~~l~~~dvIi 78 (474)
||| |.|+| .|.+|..+++.|+ +.|++|++.+|+++ +.+++..... ++.. ..+.+++.+.++.+|+||
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHE-----RVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTST-----TEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCC-----ceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 455 99999 6999999999999 89999999999998 7766542221 1111 123333333344489998
Q ss_pred EecCCC
Q 011931 79 MLVKAG 84 (474)
Q Consensus 79 l~vp~~ 84 (474)
.+....
T Consensus 79 ~~ag~~ 84 (221)
T 3r6d_A 79 VGAMES 84 (221)
T ss_dssp ESCCCC
T ss_pred EcCCCC
Confidence 887653
No 305
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.27 E-value=0.00052 Score=66.20 Aligned_cols=96 Identities=19% Similarity=0.143 Sum_probs=64.2
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHC-CCcEE-EEeCChHH-----HHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEK-GFPIS-VYNRTTSK-----VDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII 78 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~-G~~V~-v~dr~~~~-----~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi 78 (474)
++||+|+| +|.||+.+++.+.+. ++++. ++|++++. +.++.... ..++..++++++++.. +|+||
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~----~~gv~v~~dl~~ll~~---aDVvI 93 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD----FLGVRITDDPESAFSN---TEGIL 93 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS----CCSCBCBSCHHHHTTS---CSEEE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC----cCCceeeCCHHHHhcC---CCEEE
Confidence 45899999 999999999998754 67765 66887532 11111000 1146678899998876 99999
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEEEecCCCCch
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYE 113 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~ 113 (474)
-++++. .+.+.+ ...++.|.-+|.+||+...
T Consensus 94 DFT~p~-a~~~~~---~~~l~~Gv~vViGTTG~~~ 124 (288)
T 3ijp_A 94 DFSQPQ-ASVLYA---NYAAQKSLIHIIGTTGFSK 124 (288)
T ss_dssp ECSCHH-HHHHHH---HHHHHHTCEEEECCCCCCH
T ss_pred EcCCHH-HHHHHH---HHHHHcCCCEEEECCCCCH
Confidence 887653 333333 3345567778888887654
No 306
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.26 E-value=0.0012 Score=65.81 Aligned_cols=117 Identities=15% Similarity=0.164 Sum_probs=76.6
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCC----hHH----HHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcE
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRT----TSK----VDETVERAKKEGDLPLFGFRDPESFVNSIQKPRV 76 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~----~~~----~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dv 76 (474)
...||-|+|+|.+|..+|+.|...|. +|+++||+ .++ +..+.+.....-. ......+++|+++. +|+
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~-~~~~~~~L~eav~~---ADV 266 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITN-PERLSGDLETALEG---ADF 266 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC-TTCCCSCHHHHHTT---CSE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhh-ccCchhhHHHHHcc---CCE
Confidence 34689999999999999999999998 89999998 554 2222222221100 11224578888887 999
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
+|-+..++.-. ++....+.++.+|+++||-.|+.+-+.+. +.|-..+..+
T Consensus 267 lIG~Sap~l~t----~emVk~Ma~~pIIfalSNPt~E~~p~~a~---~~g~~i~atG 316 (388)
T 1vl6_A 267 FIGVSRGNILK----PEWIKKMSRKPVIFALANPVPEIDPELAR---EAGAFIVATG 316 (388)
T ss_dssp EEECSCSSCSC----HHHHTTSCSSCEEEECCSSSCSSCHHHHH---HTTCSEEEES
T ss_pred EEEeCCCCccC----HHHHHhcCCCCEEEEcCCCCCCCCHHHHH---HhcCeEEEeC
Confidence 98887643222 34444566788999999977654433332 2344444443
No 307
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.23 E-value=0.00079 Score=66.68 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=61.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhh--hcCC----------CCccccCCHHHHHhhcC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAK--KEGD----------LPLFGFRDPESFVNSIQ 72 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~--~~~~----------~~~~~~~s~~e~~~~l~ 72 (474)
|+||||+|+|.||+.+++.|.++ +++|. +.|++++...+...... ..+. .++....+++++...
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~-- 78 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDE-- 78 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHT--
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcC--
Confidence 46899999999999999999874 45664 56887665554443210 0000 012222356666665
Q ss_pred CCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 73 KPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 73 ~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+|+||.|+|... ..+..... ++.|..|||.+..
T Consensus 79 -vDvV~~atp~~~-~~~~a~~~---l~aG~~VId~sp~ 111 (337)
T 1cf2_P 79 -ADIVIDCTPEGI-GAKNLKMY---KEKGIKAIFQGGE 111 (337)
T ss_dssp -CSEEEECCSTTH-HHHHHHHH---HHHTCCEEECTTS
T ss_pred -CCEEEECCCchh-hHHHHHHH---HHcCCEEEEecCC
Confidence 999999999874 33333333 3456678888776
No 308
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.22 E-value=0.002 Score=63.76 Aligned_cols=97 Identities=12% Similarity=0.165 Sum_probs=60.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC-CcEE-EEeCChHHHHHHHHhhhhc--C---------CCCccccCCHHHHHhhcCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG-FPIS-VYNRTTSKVDETVERAKKE--G---------DLPLFGFRDPESFVNSIQK 73 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G-~~V~-v~dr~~~~~~~l~~~~~~~--~---------~~~~~~~~s~~e~~~~l~~ 73 (474)
|.||||+|+|.||+.+++.|.++. .+|. +.|++++....+....... . ..++....+++++.+.
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~--- 77 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKT--- 77 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHH---
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcC---
Confidence 358999999999999999998763 4654 6788876655554431000 0 0011122244455555
Q ss_pred CcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 74 PRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 74 ~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+|+||.|+|... ..+.... +++.|..+|+.|.-
T Consensus 78 vDvV~~aTp~~~-s~~~a~~---~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 78 SDIVVDTTPNGV-GAQYKPI---YLQLQRNAIFQGGE 110 (340)
T ss_dssp CSEEEECCSTTH-HHHHHHH---HHHTTCEEEECTTS
T ss_pred CCEEEECCCCch-hHHHHHH---HHHcCCeEEEeCCC
Confidence 899999999873 3333332 34567788888765
No 309
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.21 E-value=0.00039 Score=58.30 Aligned_cols=103 Identities=12% Similarity=0.089 Sum_probs=74.6
Q ss_pred cCcEEEEcc----cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGL----AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGl----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
..+|+|||+ +..|..+.++|.+.||+|+-+|+..+.+. +...+.+++|+-. .|++++++|
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~------------G~~~y~sl~dlp~----vDlavi~~p 67 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVL------------GKTIINERPVIEG----VDTVTLYIN 67 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEET------------TEECBCSCCCCTT----CCEEEECSC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCC------------CeeccCChHHCCC----CCEEEEEeC
Confidence 357999997 57999999999999999998887643221 3566777776543 799999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
+. .+.++++++...- ...+|+..+.. .+++.+.+++.|+++++
T Consensus 68 ~~-~v~~~v~e~~~~g-~k~v~~~~G~~----~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 68 PQ-NQLSEYNYILSLK-PKRVIFNPGTE----NEELEEILSENGIEPVI 110 (122)
T ss_dssp HH-HHGGGHHHHHHHC-CSEEEECTTCC----CHHHHHHHHHTTCEEEE
T ss_pred HH-HHHHHHHHHHhcC-CCEEEECCCCC----hHHHHHHHHHcCCeEEC
Confidence 85 7778887776542 33455544332 24666777888999884
No 310
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.21 E-value=0.00024 Score=71.00 Aligned_cols=100 Identities=14% Similarity=0.292 Sum_probs=57.8
Q ss_pred CCCCCCc-CcEEEEc-ccHhHHHHHHHHHHCC-CcEEEEeCChH----HHHHHHHh--------hhhcCCCCcccc-CCH
Q 011931 1 MVEGKQL-TRIGLAG-LAVMGQNLALNIAEKG-FPISVYNRTTS----KVDETVER--------AKKEGDLPLFGF-RDP 64 (474)
Q Consensus 1 m~~~~~~-~~IgiIG-lG~mG~~lA~~L~~~G-~~V~v~dr~~~----~~~~l~~~--------~~~~~~~~~~~~-~s~ 64 (474)
|.++.+| +||+|+| .|.+|+.+++.|.++. ++|...++++. ........ ... .+... .++
T Consensus 1 m~~~~~M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 76 (354)
T 1ys4_A 1 MSKGEKMKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIK----DMVVIPTDP 76 (354)
T ss_dssp ------CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHH----TCBCEESCT
T ss_pred CCCcccccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCce----eeEEEeCCH
Confidence 6555544 6899999 8999999999998764 57766643221 12211100 000 11111 245
Q ss_pred HHHHh-hcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 65 ESFVN-SIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 65 ~e~~~-~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+++.+ . +|+||+|+|.. ...+....+ +..|..|||.++..
T Consensus 77 ~~~~~~~---~DvV~~atp~~-~~~~~a~~~---~~aG~~VId~s~~~ 117 (354)
T 1ys4_A 77 KHEEFED---VDIVFSALPSD-LAKKFEPEF---AKEGKLIFSNASAY 117 (354)
T ss_dssp TSGGGTT---CCEEEECCCHH-HHHHHHHHH---HHTTCEEEECCSTT
T ss_pred HHHhcCC---CCEEEECCCch-HHHHHHHHH---HHCCCEEEECCchh
Confidence 55444 4 99999999975 344444433 45788899998763
No 311
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.20 E-value=0.0039 Score=60.95 Aligned_cols=97 Identities=16% Similarity=0.235 Sum_probs=59.2
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHC-C--CcEEEEeCChHHHHHHHHhhhhcCCCC--cccc--CCHHHHHhhcCCCcEEEE
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEK-G--FPISVYNRTTSKVDETVERAKKEGDLP--LFGF--RDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~-G--~~V~v~dr~~~~~~~l~~~~~~~~~~~--~~~~--~s~~e~~~~l~~~dvIil 79 (474)
|||+||| +|.+|.+++..|+.. + .++.++|+++ +++.......+. ... +... ++..+..+. +|+||+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~-~~~~~v~~~~~~~~~~~~~~---aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-PTAVKIKGFSGEDATPALEG---ADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS-CSSEEEEEECSSCCHHHHTT---CSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC-CCCceEEEecCCCcHHHhCC---CCEEEE
Confidence 6899999 899999999999875 5 4899999987 322211111110 011 2221 234445555 999999
Q ss_pred ecCCCh----h-----------HHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGA----P-----------VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~----~-----------v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+.+. . ++++.+.+... .+..+|+..||-
T Consensus 76 ~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNP 120 (312)
T 3hhp_A 76 SAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNP 120 (312)
T ss_dssp CCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSC
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCc
Confidence 885432 1 22233444444 467788888763
No 312
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.18 E-value=0.012 Score=55.55 Aligned_cols=151 Identities=13% Similarity=0.066 Sum_probs=101.6
Q ss_pred CccccCCHHHHHhhcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011931 57 PLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (474)
Q Consensus 57 ~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsg 136 (474)
++..+++..|+++. +|++|+-+|-+.....+++.++++++.|.||.++.|.+|.......+.+.++.+.+.++...
T Consensus 128 GVkVtsDD~EAvk~---AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCTipp~~ly~~le~l~R~DvgIsS~HPa- 203 (358)
T 2b0j_A 128 GLKVTSDDREAVEG---ADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPG- 203 (358)
T ss_dssp TCEEESCHHHHHTT---CSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECBCS-
T ss_pred CcEeecchHHHhcC---CCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccCCCHHHHHHHHHHhCcccCCeeccCCC-
Confidence 57788999999998 99999999999878889999999999999999999998776666655555555655554211
Q ss_pred CcccccCCCcccc-C-CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011931 137 GEEGARHGPSLMP-G-GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSV 214 (474)
Q Consensus 137 g~~~a~~G~~i~~-g-g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~ 214 (474)
+.++. .|.++.. + .++++.+++.+|.++.+.. .+.+...=.+...-|. ..+.+...+.+.+-+....+.
T Consensus 204 aVPgt-~Gq~~~g~~yAtEEqIeklveLaksa~k~-------ay~vPAdl~SpV~DMg-s~vTAv~~AGiL~Y~~~vtkI 274 (358)
T 2b0j_A 204 CVPEM-KGQVYIAEGYASEEAVNKLYEIGKIARGK-------AFKMPANLIGPVCDMC-SAVTATVYAGLLAYRDAVTKI 274 (358)
T ss_dssp SCTTT-CCCEEEEESSSCHHHHHHHHHHHHHHHSC-------EEEEEHHHHHHHHSTT-HHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCC-CCccccccccCCHHHHHHHHHHHHHhCCC-------eEecchhhccchhhhH-HHHHHHHHHHHHHHHHHHHHH
Confidence 11121 4553332 2 3899999999999999876 2444332223222222 233444556666666666555
Q ss_pred CCCCHH
Q 011931 215 GKLTNE 220 (474)
Q Consensus 215 G~l~~~ 220 (474)
-|.+.+
T Consensus 275 lgAP~~ 280 (358)
T 2b0j_A 275 LGAPAD 280 (358)
T ss_dssp SCCCHH
T ss_pred hcCcHH
Confidence 435543
No 313
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.14 E-value=0.0008 Score=64.96 Aligned_cols=73 Identities=15% Similarity=0.349 Sum_probs=57.4
Q ss_pred CcEEEEcccH-hHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHH--HHHhhcCCCcEEEEecCCC
Q 011931 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPE--SFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 8 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~--e~~~~l~~~dvIil~vp~~ 84 (474)
.++.|||.|. +|.++|..|...|..|+++++... +++ +.+.. +|+||.+++.+
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~---------------------~l~l~~~~~~---ADIVI~Avg~p 221 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS---------------------TEDMIDYLRT---ADIVIAAMGQP 221 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC---------------------HHHHHHHHHT---CSEEEECSCCT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC---------------------Cchhhhhhcc---CCEEEECCCCC
Confidence 4799999887 799999999999999999997422 223 55666 99999999976
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
..+. ...+++|.+|||.+..
T Consensus 222 ~~I~------~~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 222 GYVK------GEWIKEGAAVVDVGTT 241 (300)
T ss_dssp TCBC------GGGSCTTCEEEECCCE
T ss_pred CCCc------HHhcCCCcEEEEEecc
Confidence 4322 2457899999999875
No 314
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.12 E-value=0.00019 Score=68.97 Aligned_cols=98 Identities=15% Similarity=0.175 Sum_probs=59.6
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHH-CCCcEE-EEeCChHHHH--HHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAE-KGFPIS-VYNRTTSKVD--ETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~-~G~~V~-v~dr~~~~~~--~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~v 81 (474)
+|||+|+|+ |.||+.++..+.+ .|++|. ++|+++++.. .+.+..... ..++..+++++++++. +|+||-++
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~-~~~v~~~~dl~~~l~~---~DvVIDft 80 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG-KTGVTVQSSLDAVKDD---FDVFIDFT 80 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS-CCSCCEESCSTTTTTS---CSEEEECS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC-cCCceecCCHHHHhcC---CCEEEEcC
Confidence 469999998 9999999998874 578877 8898764310 000000000 0123445677776665 99999565
Q ss_pred CCChhHHHHHHHHHhcccCCCEEEecCCCCc
Q 011931 82 KAGAPVDETIKTLSAYMEKGDCIIDGGNEWY 112 (474)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~st~~~ 112 (474)
++. ...+.+. ..+..|.-+|..++...
T Consensus 81 ~p~-~~~~~~~---~a~~~G~~vVigTtG~~ 107 (273)
T 1dih_A 81 RPE-GTLNHLA---FCRQHGKGMVIGTTGFD 107 (273)
T ss_dssp CHH-HHHHHHH---HHHHTTCEEEECCCCCC
T ss_pred ChH-HHHHHHH---HHHhCCCCEEEECCCCC
Confidence 443 3444433 33456776777666543
No 315
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.09 E-value=0.0013 Score=63.00 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=76.7
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++.|+|+|-.+++++..|++.|. +|+++||+.++.+++.+...... ......... ..++.+|+||-++|.+-.
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~--~~~~~~~~~---~~~~~~dliiNaTp~Gm~ 200 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGF--PGLTVSTQF---SGLEDFDLVANASPVGMG 200 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHC--TTCEEESCC---SCSTTCSEEEECSSTTCS
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccC--Ccceehhhh---hhhhcccccccCCccccC
Confidence 579999999999999999999996 79999999999988876543210 001111111 223348999999986521
Q ss_pred HH---HHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 87 VD---ETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 87 v~---~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
-. .+-......+.++.++.|.--.+.. | .+.+..+++|...++
T Consensus 201 ~~~~~p~~~~~~~~l~~~~~v~D~vY~P~~-T-~ll~~A~~~G~~~~~ 246 (269)
T 3tum_A 201 TRAELPLSAALLATLQPDTLVADVVTSPEI-T-PLLNRARQVGCRIQT 246 (269)
T ss_dssp TTCCCSSCHHHHHTCCTTSEEEECCCSSSS-C-HHHHHHHHHTCEEEC
T ss_pred CCCCCCCChHHHhccCCCcEEEEEccCCCC-C-HHHHHHHHCcCEEEC
Confidence 11 0112334567889999998765433 3 344455667776553
No 316
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.08 E-value=0.00045 Score=64.46 Aligned_cols=74 Identities=9% Similarity=0.258 Sum_probs=49.5
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
|++|.|.| .|.+|+.+++.|++.| ++|++++|++++.+.+...... -+.. ..+.+++.+.++.+|+||.+...
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~----~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQ----IIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEE----EEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcE----EEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 45688998 7999999999999999 8999999998765432211100 0000 12344443334458999988765
Q ss_pred C
Q 011931 84 G 84 (474)
Q Consensus 84 ~ 84 (474)
.
T Consensus 99 ~ 99 (236)
T 3qvo_A 99 E 99 (236)
T ss_dssp T
T ss_pred C
Confidence 4
No 317
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.06 E-value=0.0017 Score=59.31 Aligned_cols=71 Identities=17% Similarity=0.210 Sum_probs=48.4
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
|||.|+| .|.+|+.++..|++.|++|++.+|++++.+.+. ..... ......+...+.+. .+|+||.+....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~--~~~D~~d~~~~~~~---~~d~vi~~ag~~ 72 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINI--LQKDIFDLTLSDLS---DQNVVVDAYGIS 72 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEE--EECCGGGCCHHHHT---TCSEEEECCCSS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeE--EeccccChhhhhhc---CCCEEEECCcCC
Confidence 5899999 599999999999999999999999998876653 11100 00001111113334 499999988653
No 318
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.01 E-value=0.014 Score=54.96 Aligned_cols=97 Identities=13% Similarity=0.187 Sum_probs=59.6
Q ss_pred CcEEEEcc-cHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh-hcCCCcEEEEecCC
Q 011931 8 TRIGLAGL-AVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN-SIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIGl-G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~-~l~~~dvIil~vp~ 83 (474)
|||+|+|+ |.||+.++..+.+. +++|. ++|++. +++++.. . +|+||-+.++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~----------------------dl~~~~~~~---~DvvIDfT~p 55 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD----------------------PLSLLTDGN---TEVVIDFTHP 55 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC----------------------CTHHHHHTT---CCEEEECSCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC----------------------CHHHHhccC---CcEEEEccCh
Confidence 58999996 99999999998865 89887 666541 2333333 3 8999977765
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHH-HHHHHHHHc-CCeEEecC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTE-RREKAMAEL-GLLYLGMG 133 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~-~~~~~l~~~-g~~~v~~p 133 (474)
. .+.+.+.. .+..|.-+|..+|+...... ++.+..++. ++.++-+|
T Consensus 56 ~-a~~~~~~~---a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~ 103 (245)
T 1p9l_A 56 D-VVMGNLEF---LIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAP 103 (245)
T ss_dssp T-THHHHHHH---HHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECS
T ss_pred H-HHHHHHHH---HHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEEC
Confidence 4 45544433 34467767777776544322 233333322 55544444
No 319
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.00 E-value=0.00068 Score=67.03 Aligned_cols=98 Identities=11% Similarity=0.125 Sum_probs=59.1
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHC-CCcEEEEeCCh---HHHHHHHHhhhhcCCC-CccccC--CHHHHHhhcCCCcEEE
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEK-GFPISVYNRTT---SKVDETVERAKKEGDL-PLFGFR--DPESFVNSIQKPRVII 78 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~-G~~V~v~dr~~---~~~~~l~~~~~~~~~~-~~~~~~--s~~e~~~~l~~~dvIi 78 (474)
|+||+|+| .|.+|..+.+.|.++ .+++.....+. ..-+.+.+....-.+. ...... +.+++.+. +|+||
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~---~Dvvf 80 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPG---VDVVF 80 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTT---CSEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcC---CCEEE
Confidence 57999999 699999999999884 45777553322 2212222111000000 122221 34444344 99999
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+|+|.+ ...+....+ ++.|..|||.|+-.
T Consensus 81 ~a~p~~-~s~~~~~~~---~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 81 LATAHE-VSHDLAPQF---LEAGCVVFDLSGAF 109 (337)
T ss_dssp ECSCHH-HHHHHHHHH---HHTTCEEEECSSTT
T ss_pred ECCChH-HHHHHHHHH---HHCCCEEEEcCCcc
Confidence 999976 334444443 45789999999875
No 320
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.99 E-value=0.0017 Score=62.27 Aligned_cols=73 Identities=16% Similarity=0.261 Sum_probs=58.2
Q ss_pred CcEEEEcccH-hHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++.|||.|. +|.++|..|...|..|++++++. .++++.+.. +|+||.+++.+..
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------------------~~L~~~~~~---ADIVI~Avg~p~~ 217 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT---------------------TDLKSHTTK---ADILIVAVGKPNF 217 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SSHHHHHTT---CSEEEECCCCTTC
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHhccc---CCEEEECCCCCCC
Confidence 4799999987 79999999999999999998641 255666666 9999999987643
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+. .+.+++|.+|||.+..
T Consensus 218 I~------~~~vk~GavVIDvgi~ 235 (285)
T 3l07_A 218 IT------ADMVKEGAVVIDVGIN 235 (285)
T ss_dssp BC------GGGSCTTCEEEECCCE
T ss_pred CC------HHHcCCCcEEEEeccc
Confidence 22 2457899999999875
No 321
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.98 E-value=0.0017 Score=62.62 Aligned_cols=74 Identities=12% Similarity=0.203 Sum_probs=59.2
Q ss_pred CcEEEEcccH-hHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++.|||.|. +|.++|..|...|..|++++++ +.++.+.+.. +|+||.+++.+..
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------------------t~~L~~~~~~---ADIVI~Avg~p~~ 221 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK---------------------TAHLDEEVNK---GDILVVATGQPEM 221 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------------------CSSHHHHHTT---CSEEEECCCCTTC
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECC---------------------cccHHHHhcc---CCEEEECCCCccc
Confidence 5799999995 7999999999999999999744 2356666676 9999999998642
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+. ...+++|.+|||.+...
T Consensus 222 I~------~~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 222 VK------GEWIKPGAIVIDCGINY 240 (301)
T ss_dssp BC------GGGSCTTCEEEECCCBC
T ss_pred CC------HHHcCCCcEEEEccCCC
Confidence 21 23478999999999864
No 322
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.97 E-value=0.0022 Score=58.72 Aligned_cols=71 Identities=11% Similarity=0.149 Sum_probs=48.0
Q ss_pred CcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 8 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
|||.|+|. |.+|+.++..|++.|++|++.+|++++...+....... ......+...+... .+|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~--~~~D~~d~~~~~~~---~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVAT--LVKEPLVLTEADLD---SVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEE--EECCGGGCCHHHHT---TCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceE--EecccccccHhhcc---cCCEEEECCcc
Confidence 57999996 99999999999999999999999998876553221100 00001111113334 48999988754
No 323
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.97 E-value=0.0015 Score=62.59 Aligned_cols=74 Identities=18% Similarity=0.324 Sum_probs=58.9
Q ss_pred CcEEEEcccH-hHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++.|||.|. +|.++|..|...|..|+++++.. .++.+.+.. +|+||.+++.+..
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------------------~~L~~~~~~---ADIVI~Avg~p~l 215 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT---------------------KNLRHHVEN---ADLLIVAVGKPGF 215 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC---------------------SCHHHHHHH---CSEEEECSCCTTC
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHhcc---CCEEEECCCCcCc
Confidence 5799999996 69999999999999999997442 356667777 9999999997642
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+. ...+++|.+|||.+...
T Consensus 216 I~------~~~vk~GavVIDVgi~r 234 (288)
T 1b0a_A 216 IP------GDWIKEGAIVIDVGINR 234 (288)
T ss_dssp BC------TTTSCTTCEEEECCCEE
T ss_pred CC------HHHcCCCcEEEEccCCc
Confidence 11 13468999999998753
No 324
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.96 E-value=0.0016 Score=62.47 Aligned_cols=74 Identities=19% Similarity=0.280 Sum_probs=58.9
Q ss_pred CcEEEEcccH-hHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++.|||.|. +|.++|..|...|..|++++++. .++++.+.. +|+||.+++.+..
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t---------------------~~L~~~~~~---ADIVI~Avg~p~~ 216 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT---------------------KDLSLYTRQ---ADLIIVAAGCVNL 216 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SCHHHHHTT---CSEEEECSSCTTC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHhhc---CCEEEECCCCCCc
Confidence 4799999987 69999999999999999998642 256666676 9999999987643
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+. .+.+++|.+|||.+...
T Consensus 217 I~------~~~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 217 LR------SDMVKEGVIVVDVGINR 235 (285)
T ss_dssp BC------GGGSCTTEEEEECCCEE
T ss_pred CC------HHHcCCCeEEEEeccCc
Confidence 22 24578999999998653
No 325
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.96 E-value=0.0037 Score=64.34 Aligned_cols=114 Identities=17% Similarity=0.167 Sum_probs=67.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChH----HHHHHHHhhhhcCCCCccccCCHHHHHhhcCC-CcEEEEe-
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS----KVDETVERAKKEGDLPLFGFRDPESFVNSIQK-PRVIIML- 80 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~----~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~-~dvIil~- 80 (474)
.++|.|||+|..|.+.|+.|.+.|++|+++|+++. ..+.+.+.+. .+..-..+++... . +|+||++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi-----~~~~g~~~~~~~~---~~~d~vv~sp 80 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGI-----KVVCGSHPLELLD---EDFCYMIKNP 80 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTC-----EEEESCCCGGGGG---SCEEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCC-----EEEECCChHHhhc---CCCCEEEECC
Confidence 46899999999999999999999999999998642 3444544332 1222223333322 2 6888886
Q ss_pred -cCCCh-hHHHHHH---------HHHhcccCCCEE-EecCCCCchhHHHHHHHHHHcCCe
Q 011931 81 -VKAGA-PVDETIK---------TLSAYMEKGDCI-IDGGNEWYENTERREKAMAELGLL 128 (474)
Q Consensus 81 -vp~~~-~v~~vl~---------~l~~~l~~g~ii-Id~st~~~~~~~~~~~~l~~~g~~ 128 (474)
+|... .+....+ +++..+.+..+| |..|+++-.++.-+...|...|..
T Consensus 81 gi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~ 140 (451)
T 3lk7_A 81 GIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQR 140 (451)
T ss_dssp TSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCC
Confidence 34332 2222211 233223334444 555666544455556677777763
No 326
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.95 E-value=0.0031 Score=62.42 Aligned_cols=97 Identities=8% Similarity=0.041 Sum_probs=58.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHhh--hhcCC------------CCccccCCHHHHHhh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNRTTSKVDETVERA--KKEGD------------LPLFGFRDPESFVNS 70 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~~--~~~~~------------~~~~~~~s~~e~~~~ 70 (474)
|+||||+|+|.+|+.+++.|.++ +++|. +.|++++....+.+.. ...+. ..+....++.++...
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~ 81 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIED 81 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccC
Confidence 46999999999999999999876 56765 5577666655444331 00000 011122233444444
Q ss_pred cCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCC
Q 011931 71 IQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 71 l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st 109 (474)
+|+|+.|+|.+.. ..... ..+++.|..||+.+.
T Consensus 82 ---vDiV~eatg~~~s-~~~a~--~~~l~aG~~VI~sap 114 (343)
T 2yyy_A 82 ---ADIVVDGAPKKIG-KQNLE--NIYKPHKVKAILQGG 114 (343)
T ss_dssp ---CSEEEECCCTTHH-HHHHH--HTTTTTTCEEEECTT
T ss_pred ---CCEEEECCCcccc-HHHHH--HHHHHCCCEEEECCC
Confidence 8999999887632 22222 256777888877433
No 327
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.93 E-value=0.0019 Score=63.70 Aligned_cols=95 Identities=5% Similarity=0.065 Sum_probs=62.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCcccc-CCHHHHHh-hcCCCcEEEEecCCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGF-RDPESFVN-SIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~-~s~~e~~~-~l~~~dvIil~vp~~~ 85 (474)
++|-|+|.|.+|..+++.|.+.|+ |++.|+++++++ +.+.+... +... ++.+.+.+ .++++|.++++++++.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~----i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~ 189 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANF----VHGDPTRVSDLEKANVRGARAVIVDLESDS 189 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEE----EESCTTSHHHHHHTCSTTEEEEEECCSSHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEE----EEeCCCCHHHHHhcChhhccEEEEcCCccH
Confidence 479999999999999999999999 999999999988 66533210 1121 23333322 2567999999998753
Q ss_pred hHHHHHHHHHhcccCC-CEEEecCC
Q 011931 86 PVDETIKTLSAYMEKG-DCIIDGGN 109 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g-~iiId~st 109 (474)
..-.+-..+..+.+. .++.-..+
T Consensus 190 -~n~~~~~~ar~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 190 -ETIHCILGIRKIDESVRIIAEAER 213 (336)
T ss_dssp -HHHHHHHHHHTTCTTSEEEEECSS
T ss_pred -HHHHHHHHHHHHCCCCeEEEEECC
Confidence 222223334445555 45554433
No 328
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.93 E-value=0.0021 Score=60.83 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=31.1
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTT 40 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~ 40 (474)
.+|.|||+|.+|+.++.+|+..|. +++++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999997 899999986
No 329
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.92 E-value=0.00039 Score=68.66 Aligned_cols=85 Identities=14% Similarity=0.132 Sum_probs=58.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC---------CcE-EEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG---------FPI-SVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRV 76 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G---------~~V-~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dv 76 (474)
++||||||+|.||+.++..|.+.. .+| .++|+++++.+.+ . ....++|+++++ . .|+
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~----~-----~~~~~~d~~~ll-~---iDv 69 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAI----P-----QELLRAEPFDLL-E---ADL 69 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSS----C-----GGGEESSCCCCT-T---CSE
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhcc----C-----cccccCCHHHHh-C---CCE
Confidence 468999999999999999998763 455 4789987643221 0 013566777777 4 999
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCEEEec
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDG 107 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~iiId~ 107 (474)
|+.|+|+.....+.+ ...|..|+.|+..
T Consensus 70 Vve~t~~~~~a~~~~---~~AL~aGKhVVta 97 (332)
T 2ejw_A 70 VVEAMGGVEAPLRLV---LPALEAGIPLITA 97 (332)
T ss_dssp EEECCCCSHHHHHHH---HHHHHTTCCEEEC
T ss_pred EEECCCCcHHHHHHH---HHHHHcCCeEEEC
Confidence 999999864333333 3345677777764
No 330
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.91 E-value=0.0016 Score=62.29 Aligned_cols=74 Identities=18% Similarity=0.339 Sum_probs=58.2
Q ss_pred CcEEEEcccHh-HHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 8 TRIGLAGLAVM-GQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 8 ~~IgiIGlG~m-G~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
.++.|||.|.+ |.++|..|... |..|++++++. .++.+.+.+ +|+||.+++.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------------------~~L~~~~~~---ADIVI~Avg~p 214 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------------------RDLPALTRQ---ADIVVAAVGVA 214 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC---------------------SCHHHHHTT---CSEEEECSCCT
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch---------------------hHHHHHHhh---CCEEEECCCCC
Confidence 57999999975 99999999999 88999997543 356666666 99999999977
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
..+. .+.+++|.+|||.+...
T Consensus 215 ~~I~------~~~vk~GavVIDVgi~r 235 (281)
T 2c2x_A 215 HLLT------ADMVRPGAAVIDVGVSR 235 (281)
T ss_dssp TCBC------GGGSCTTCEEEECCEEE
T ss_pred cccC------HHHcCCCcEEEEccCCC
Confidence 4221 23468899999998753
No 331
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.91 E-value=0.014 Score=56.63 Aligned_cols=104 Identities=15% Similarity=0.074 Sum_probs=77.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccCh
Q 011931 311 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 390 (474)
Q Consensus 311 ~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~~ 390 (474)
.+.++.+|.+.|.+....+..++|.+.+.++. ++|..++.++++.+ ..+|++++.....+-+.+. . +
T Consensus 172 ~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~d~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~-~-----~ 238 (303)
T 3g0o_A 172 PGAGSTVKIIHQLLAGVHIAAAAEAMALAARA------GIPLDVMYDVVTHA-AGNSWMFENRMQHVVDGDY-T-----P 238 (303)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHTTS-TTCCHHHHHHHHHHHTTCC-C-----C
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhc-ccCCHHHHhhhHHHhcCCC-C-----C
Confidence 57788999999999999999999999987753 49999999999987 4578887765444333221 1 1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011931 391 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 429 (474)
Q Consensus 391 ~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~ 429 (474)
.|. +.....+++.++..|-+.|+|+|.+.++...|..
T Consensus 239 ~~~--~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~ 275 (303)
T 3g0o_A 239 RSA--VDIFVKDLGLVADTAKALRFPLPLASTALNMFTS 275 (303)
T ss_dssp SSB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CCc--hHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 111 1123445688999999999999999998876653
No 332
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.90 E-value=0.00027 Score=65.06 Aligned_cols=82 Identities=18% Similarity=0.293 Sum_probs=55.0
Q ss_pred cCcEEEEcccHhHHHHHHHH--HHCCCcEE-EEeCChH-HHHH-HHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec
Q 011931 7 LTRIGLAGLAVMGQNLALNI--AEKGFPIS-VYNRTTS-KVDE-TVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L--~~~G~~V~-v~dr~~~-~~~~-l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~v 81 (474)
+.+|+|||+|.+|..++..+ .+.|+++. ++|.+++ +... ... +..+...++++++++. .+.|++++|+
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~------GvpV~~~~dL~~~v~~-~~Id~vIIAv 156 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTED------GIPVYGISTINDHLID-SDIETAILTV 156 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTT------CCBEEEGGGHHHHC-C-CSCCEEEECS
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeEC------CeEEeCHHHHHHHHHH-cCCCEEEEec
Confidence 45799999999999999873 45677765 6799987 6432 111 1123344566666654 3489999999
Q ss_pred CCChhHHHHHHHHHh
Q 011931 82 KAGAPVDETIKTLSA 96 (474)
Q Consensus 82 p~~~~v~~vl~~l~~ 96 (474)
|.. ...++.+.+.+
T Consensus 157 Ps~-~aq~v~d~lv~ 170 (212)
T 3keo_A 157 PST-EAQEVADILVK 170 (212)
T ss_dssp CGG-GHHHHHHHHHH
T ss_pred Cch-hHHHHHHHHHH
Confidence 986 45566665554
No 333
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.89 E-value=0.00015 Score=66.89 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=53.8
Q ss_pred cCcEEEEcccHhHHHHHHHHH-HCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIA-EKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~-~~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
..+|+|||+|.+|..++..+. ..|+++. ++|.++++....... .++...++++++++. +.|.|++|+|..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~i~g------v~V~~~~dl~ell~~--~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRG------GVIEHVDLLPQRVPG--RIEIALLTVPRE 151 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETT------EEEEEGGGHHHHSTT--TCCEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhhhhcC------CeeecHHhHHHHHHc--CCCEEEEeCCch
Confidence 458999999999999998532 1277665 779998875432211 123345677777764 489999999975
Q ss_pred hhHHHHHHHHH
Q 011931 85 APVDETIKTLS 95 (474)
Q Consensus 85 ~~v~~vl~~l~ 95 (474)
...++.+.+.
T Consensus 152 -~~~ei~~~l~ 161 (211)
T 2dt5_A 152 -AAQKAADLLV 161 (211)
T ss_dssp -HHHHHHHHHH
T ss_pred -hHHHHHHHHH
Confidence 3445554443
No 334
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.84 E-value=0.0025 Score=60.99 Aligned_cols=74 Identities=22% Similarity=0.368 Sum_probs=58.7
Q ss_pred CcEEEEcccH-hHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAV-MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.++.|||.|. +|.++|..|...|..|+++++.. .++++.+.. +|+||.+++.+..
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T---------------------~~L~~~~~~---ADIVI~Avg~p~~ 217 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT---------------------RDLADHVSR---ADLVVVAAGKPGL 217 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC---------------------SCHHHHHHT---CSEEEECCCCTTC
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC---------------------cCHHHHhcc---CCEEEECCCCCCC
Confidence 4799999876 89999999999999999997531 256666777 9999999987643
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+. .+.+++|.+|||.+...
T Consensus 218 I~------~~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 218 VK------GEWIKEGAIVIDVGINR 236 (286)
T ss_dssp BC------GGGSCTTCEEEECCSCS
T ss_pred CC------HHHcCCCeEEEEecccc
Confidence 22 24578999999998754
No 335
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.82 E-value=0.0024 Score=63.73 Aligned_cols=94 Identities=13% Similarity=0.190 Sum_probs=56.7
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh-cCC--CCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK-EGD--LPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~-~~~--~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
+||+|+| .|.+|+.+.+.|.++.. ++...+...+...++...... .+. ..+... + ++..+. +|+||+|+|
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~-~-~~~~~~---vDvVf~atp 91 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSV-K-DADFST---VDAVFCCLP 91 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCG-G-GCCGGG---CSEEEECCC
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceec-c-hhHhcC---CCEEEEcCC
Confidence 5899999 89999999999998754 777665433222222211110 000 011111 1 333334 999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
.....+ .. ..+ +.|..|||.|+-.
T Consensus 92 ~~~s~~-~a---~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 92 HGTTQE-II---KEL-PTALKIVDLSADF 115 (359)
T ss_dssp TTTHHH-HH---HTS-CTTCEEEECSSTT
T ss_pred chhHHH-HH---HHH-hCCCEEEECCccc
Confidence 874332 22 234 6789999999865
No 336
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.80 E-value=0.019 Score=56.06 Aligned_cols=104 Identities=12% Similarity=0.080 Sum_probs=79.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccCh
Q 011931 311 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 390 (474)
Q Consensus 311 ~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~~ 390 (474)
.+.++.+|.+.|.+.+..+..++|++.+.++. ++|..++.++++.+. .+|++++.....+.+.+.- +
T Consensus 192 ~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~d~~~~~~~~~~~~-~~s~~~~~~~~~~l~~~~~------~ 258 (320)
T 4dll_A 192 HGSGQLTKLANQMIVGITIGAVAEALLFATKG------GADMAKVKEAITGGF-ADSRVLQLHGQRMVERDFA------P 258 (320)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------SCCHHHHHHHHTTST-TCBHHHHTHHHHHHTTCCC------C
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHccc-ccCHHHHHhhhhhccCCCC------C
Confidence 47789999999999999999999999998753 499999999999874 6788887765544433211 1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011931 391 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 429 (474)
Q Consensus 391 ~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~ 429 (474)
-|.- .-...+++.++..|-+.|+|+|.+.++...|..
T Consensus 259 gf~~--~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 295 (320)
T 4dll_A 259 RARL--SIQLKDMRNALATAQEIGFDAPITGLFEQLYAE 295 (320)
T ss_dssp SSBH--HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred cccH--HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 1211 123455688999999999999999999886654
No 337
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.77 E-value=0.0037 Score=61.73 Aligned_cols=100 Identities=12% Similarity=0.165 Sum_probs=61.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeC--ChHHHHHHHHhhhhcCCC----------------Ccccc--CCH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNR--TTSKVDETVERAKKEGDL----------------PLFGF--RDP 64 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr--~~~~~~~l~~~~~~~~~~----------------~~~~~--~s~ 64 (474)
|+||||+|+|.+|+.+++.|.++ +.+|. +.|+ +++....+.+.....+.+ .+... .++
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 46999999999999999998875 46766 5564 677766665421100000 01111 245
Q ss_pred HHHHhhcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 65 ESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 65 ~e~~~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+++.-.-..+|+||.|+|.....+ ....+++.|..+|++|..
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~~e----~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTTME----KAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHH----HHGGGGGGTCSEEEESSC
T ss_pred HHCccccCCCCEEEECCCchhhHH----HHHHHHhCCCeEEEeccC
Confidence 554100023899999999875433 234566778777777764
No 338
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.73 E-value=0.0026 Score=58.99 Aligned_cols=73 Identities=16% Similarity=0.123 Sum_probs=51.6
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhh-hcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK-KEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
.|+|.|.|. |.+|+.+++.|++.|++|++.+|++++.+.+...+. ..-..++. .++.++ +.++|+||.+....
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~---~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHA---FASIDAVVFAAGSG 95 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGG---GTTCSEEEECCCCC
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHH---HcCCCEEEECCCCC
Confidence 468999996 999999999999999999999999998877665321 10000111 233333 34489999887643
No 339
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.71 E-value=0.0021 Score=63.88 Aligned_cols=96 Identities=9% Similarity=0.171 Sum_probs=57.2
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCC-CCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGD-LPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~-~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
|+||+|+| .|.+|+.+.+.|.++.. ++....+..+...++.+....-.+ ..+. ..+.++ +..+|+||+|+|.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~-~~~~~~----~~~vDvV~~a~g~ 78 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLK-FVPPEK----LEPADILVLALPH 78 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCB-CBCGGG----CCCCSEEEECCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccccc-ccchhH----hcCCCEEEEcCCc
Confidence 46899999 79999999999987754 766554433221111110000000 0111 123332 3459999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
.. ..+.... ++..|..|||.|+..
T Consensus 79 ~~-s~~~a~~---~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 79 GV-FAREFDR---YSALAPVLVDLSADF 102 (345)
T ss_dssp TH-HHHTHHH---HHTTCSEEEECSSTT
T ss_pred HH-HHHHHHH---HHHCCCEEEEcCccc
Confidence 73 3334333 345788999999864
No 340
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=96.67 E-value=0.013 Score=59.44 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=47.4
Q ss_pred cCcEEEEcccHh-HHHHHHHHHH--C---CCcEEEEeCChHHHHHHHHh---hhhcCCCCccccCCHHHHHhhcCCCcEE
Q 011931 7 LTRIGLAGLAVM-GQNLALNIAE--K---GFPISVYNRTTSKVDETVER---AKKEGDLPLFGFRDPESFVNSIQKPRVI 77 (474)
Q Consensus 7 ~~~IgiIGlG~m-G~~lA~~L~~--~---G~~V~v~dr~~~~~~~l~~~---~~~~~~~~~~~~~s~~e~~~~l~~~dvI 77 (474)
++||+|||+|.. +..++..|+. . +.+|.+||+++++++..... .... ..++..+++..+.++. ||+|
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~-~~~v~~t~d~~~al~~---AD~V 77 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD-RFKVLISDTFEGAVVD---AKYV 77 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTT-SSEEEECSSHHHHHTT---CSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhC-CeEEEEeCCHHHHhCC---CCEE
Confidence 479999999985 2222334454 3 56899999999886642221 1110 0134555677777777 9999
Q ss_pred EEecCCC
Q 011931 78 IMLVKAG 84 (474)
Q Consensus 78 il~vp~~ 84 (474)
|++.-.+
T Consensus 78 iitagvg 84 (417)
T 1up7_A 78 IFQFRPG 84 (417)
T ss_dssp EECCCTT
T ss_pred EEcCCCC
Confidence 9999554
No 341
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.65 E-value=0.0092 Score=57.62 Aligned_cols=128 Identities=15% Similarity=0.207 Sum_probs=69.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
..+|.|||+|..|+.++.+|+..|. +++++|.+.=....+..........+..-+....+.+..+. +++-|.+.+..-
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN-P~v~v~~~~~~l 114 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN-PDVLFEVHNYNI 114 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC-TTSEEEEECCCT
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC-CCcEEEEecccC
Confidence 3589999999999999999999997 88999987522222211110000000111112233333222 566666655431
Q ss_pred ----hHHHHHHHHHh-cc---cCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011931 86 ----PVDETIKTLSA-YM---EKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (474)
Q Consensus 86 ----~v~~vl~~l~~-~l---~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsg 136 (474)
.++.+++.+.. .+ ..-++|||++-.. .+-..+.+.+...++.++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~-~~R~~in~~c~~~~~Pli~~gv~~ 172 (292)
T 3h8v_A 115 TTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNF-EARMTINTACNELGQTWMESGVSE 172 (292)
T ss_dssp TSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSH-HHHHHHHHHHHHHTCCEEEEEECT
T ss_pred CcHHHHHHHhhhhcccccccCCCCCEEEECCcch-hhhhHHHHHHHHhCCCEEEeeeec
Confidence 22222222211 11 4568999988764 233344555667789999888775
No 342
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.64 E-value=0.0023 Score=58.85 Aligned_cols=71 Identities=15% Similarity=0.241 Sum_probs=49.1
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
||+|.|+| .|.+|+.++..|++.|++|++.+|++++...+.... .+.. ..+.+++.+.++++|+||.+...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHL------KVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTE------EEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCce------EEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 57899999 699999999999999999999999987654321100 0101 12344443334458999988754
No 343
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.63 E-value=0.005 Score=60.82 Aligned_cols=95 Identities=17% Similarity=0.289 Sum_probs=55.6
Q ss_pred CcEEEEcccHhHHHHHHHHHHC-CCcEE-EEeC--ChHHHHHHHHhhhhcCCC------------------Ccccc--CC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEK-GFPIS-VYNR--TTSKVDETVERAKKEGDL------------------PLFGF--RD 63 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~-G~~V~-v~dr--~~~~~~~l~~~~~~~~~~------------------~~~~~--~s 63 (474)
+||||+|+|.+|+.+++.|.++ +++|. +.|+ +++....+.+.....+.+ .+... .+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~d 83 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRN 83 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCSC
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecCC
Confidence 5999999999999999999876 56666 4453 455555554211100000 01111 14
Q ss_pred HHHHH---hhcCCCcEEEEecCCChhHHHHHHHHHhcccCCC--EEEecCC
Q 011931 64 PESFV---NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGD--CIIDGGN 109 (474)
Q Consensus 64 ~~e~~---~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~--iiId~st 109 (474)
++++. .. +|+||.|+|.....+ .. ..+++.|. +|||.+.
T Consensus 84 p~~l~w~~~~---vDvV~eaTg~~~~~e-~a---~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 84 PDEIPWAEAG---AEYVVESTGVFTDKE-KA---AAHLKGGAKKVVISAPS 127 (337)
T ss_dssp GGGCCHHHHT---CSEEEECSSSCCSHH-HH---THHHHTTCSEEEESSCC
T ss_pred hHHccccccC---CCEEEECCCchhhHH-HH---HHHHHcCCCEEEEecCC
Confidence 55431 23 788888888774432 22 23344566 7887765
No 344
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.61 E-value=0.016 Score=55.68 Aligned_cols=105 Identities=14% Similarity=0.175 Sum_probs=79.6
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccC
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVD 389 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~ 389 (474)
+.+.++.+|.+.|.+.+..+..++|++.+.++. ++|..++.++++.|. ..|++++.....+.+++..
T Consensus 163 ~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~------G~d~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~------ 229 (287)
T 3pef_A 163 DVGKGAEMKLVVNMVMGGMMACFCEGLALGEKA------GLATDAILDVIGAGA-MANPMFALKGGLIRDRNFA------ 229 (287)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHST-TCCHHHHHHHHHHHTTCCC------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhcc-cccHHHHHHhhhhhcCCCC------
Confidence 356788999999999999999999999998853 499999999999873 5788877765555443211
Q ss_pred hHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011931 390 PEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 429 (474)
Q Consensus 390 ~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~ 429 (474)
+.|. +.-....++.++..|-+.|+|+|.+.++...|..
T Consensus 230 ~~~~--~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 267 (287)
T 3pef_A 230 PAFP--LKHMQKDLRLAVALGDRVGQPLVASAAANELFKG 267 (287)
T ss_dssp CSSB--HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred CCCc--hHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 1121 1123445799999999999999999998876653
No 345
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=96.59 E-value=0.0017 Score=67.31 Aligned_cols=71 Identities=11% Similarity=0.158 Sum_probs=47.7
Q ss_pred CcEEEEcccHhHHH--HHHHHHHC------CCcEEEEeCChHHHHHHHH---hhh-hcC-CCCccccCCHHHHHhhcCCC
Q 011931 8 TRIGLAGLAVMGQN--LALNIAEK------GFPISVYNRTTSKVDETVE---RAK-KEG-DLPLFGFRDPESFVNSIQKP 74 (474)
Q Consensus 8 ~~IgiIGlG~mG~~--lA~~L~~~------G~~V~v~dr~~~~~~~l~~---~~~-~~~-~~~~~~~~s~~e~~~~l~~~ 74 (474)
|||+|||.|..|.+ +...++.. +-+|.++|.++++++.... ... ..+ ..++..+++.+++++. +
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~g---A 77 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEG---A 77 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTT---C
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCC---C
Confidence 68999999998755 33334421 3479999999988664321 110 000 1246678889998887 9
Q ss_pred cEEEEec
Q 011931 75 RVIIMLV 81 (474)
Q Consensus 75 dvIil~v 81 (474)
|+||+++
T Consensus 78 D~Vi~~~ 84 (477)
T 3u95_A 78 DFIINTA 84 (477)
T ss_dssp SEEEECC
T ss_pred CEEEECc
Confidence 9999986
No 346
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.57 E-value=0.0042 Score=55.81 Aligned_cols=69 Identities=16% Similarity=0.303 Sum_probs=47.2
Q ss_pred CcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc----cCCHHHHHhhcCCCcEEEEecC
Q 011931 8 TRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG----FRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 8 ~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~----~~s~~e~~~~l~~~dvIil~vp 82 (474)
|+|.|+|. |.+|+.+++.|++.|++|++.+|++++...+... ++.. ..+.+++.+.++.+|+||.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR-------PAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCC-------CSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCC-------ceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 68999996 9999999999999999999999998764321100 1111 1233333333444888888775
Q ss_pred C
Q 011931 83 A 83 (474)
Q Consensus 83 ~ 83 (474)
.
T Consensus 77 ~ 77 (206)
T 1hdo_A 77 T 77 (206)
T ss_dssp C
T ss_pred C
Confidence 4
No 347
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.55 E-value=0.011 Score=54.77 Aligned_cols=77 Identities=16% Similarity=0.144 Sum_probs=53.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChH-HHHHHHHhhhhcCCCCcccc---CCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS-KVDETVERAKKEGDLPLFGF---RDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~-~~~~l~~~~~~~~~~~~~~~---~s~~e~~~~l~~~dvIil~vp 82 (474)
.++|-|||.|.+|..-+..|.+.|.+|++++++.. .++.+.+.+ ++... -..++ |..+|+||.++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~------~i~~i~~~~~~~d----L~~adLVIaAT~ 100 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKG------QLRVKRKKVGEED----LLNVFFIVVATN 100 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTT------SCEEECSCCCGGG----SSSCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcC------CcEEEECCCCHhH----hCCCCEEEECCC
Confidence 35799999999999999999999999999987753 355555433 12211 12222 344999998877
Q ss_pred CChhHHHHHHHH
Q 011931 83 AGAPVDETIKTL 94 (474)
Q Consensus 83 ~~~~v~~vl~~l 94 (474)
++ .+...+...
T Consensus 101 d~-~~N~~I~~~ 111 (223)
T 3dfz_A 101 DQ-AVNKFVKQH 111 (223)
T ss_dssp CT-HHHHHHHHH
T ss_pred CH-HHHHHHHHH
Confidence 65 555555443
No 348
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.52 E-value=0.019 Score=56.77 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=61.1
Q ss_pred cEEEEcc-cHhHHHHHHHHHHCCC-------cEEEEeCChH--HHHHHHHhhhhcCCC----CccccCCHHHHHhhcCCC
Q 011931 9 RIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRTTS--KVDETVERAKKEGDL----PLFGFRDPESFVNSIQKP 74 (474)
Q Consensus 9 ~IgiIGl-G~mG~~lA~~L~~~G~-------~V~v~dr~~~--~~~~l~~~~~~~~~~----~~~~~~s~~e~~~~l~~~ 74 (474)
||+|+|+ |.+|.+++..|+.... ++.+||.++. +++-..-...+. .+ ++...+++.+..+. +
T Consensus 26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~-~~~~~~~~~~~~~~~~a~~~---a 101 (345)
T 4h7p_A 26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDC-AFPLLDKVVVTADPRVAFDG---V 101 (345)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT-TCTTEEEEEEESCHHHHTTT---C
T ss_pred EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhc-CccCCCcEEEcCChHHHhCC---C
Confidence 8999996 9999999999987653 7999999864 222221111110 00 23445667776666 9
Q ss_pred cEEEEecCCC----hh-----------HHHHHHHHHhcccCCCEEEecCCC
Q 011931 75 RVIIMLVKAG----AP-----------VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 75 dvIil~vp~~----~~-----------v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
|+||++--.+ .. ++++.+.+.....++.+|+-.||-
T Consensus 102 dvVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 102 AIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 9999976322 12 222334455545577777777773
No 349
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.51 E-value=0.0047 Score=56.51 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=50.3
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCC-HHHHHhhcCCCcEEEEecCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRD-PESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--~~s-~~e~~~~l~~~dvIil~vp~ 83 (474)
|||.|+| .|.+|+.++..|++.|++|++.+|++++.+.+ ... .+.. ..+ .+++.+.++++|+||.+...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~-----~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNV-----KAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTE-----EEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCc-----eEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 5899998 89999999999999999999999998765432 000 0111 123 55555556668999988765
Q ss_pred C
Q 011931 84 G 84 (474)
Q Consensus 84 ~ 84 (474)
.
T Consensus 74 ~ 74 (219)
T 3dqp_A 74 G 74 (219)
T ss_dssp T
T ss_pred C
Confidence 4
No 350
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.49 E-value=0.0076 Score=58.49 Aligned_cols=36 Identities=17% Similarity=0.297 Sum_probs=31.9
Q ss_pred CCcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCCh
Q 011931 5 KQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTT 40 (474)
Q Consensus 5 ~~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~ 40 (474)
.+||+|.|+| .|.+|+.++..|++.|++|++.+|++
T Consensus 2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 2 SHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp --CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 4578899999 59999999999999999999999986
No 351
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.46 E-value=0.0067 Score=58.81 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=31.8
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChH
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTS 41 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~ 41 (474)
+++|.|+| .|.+|+.++..|++.|++|++.+|+++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 45899999 599999999999999999999999874
No 352
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.41 E-value=0.037 Score=53.04 Aligned_cols=104 Identities=17% Similarity=0.190 Sum_probs=78.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccCh
Q 011931 311 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDP 390 (474)
Q Consensus 311 ~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~~ 390 (474)
.+.++.+|.+.|.+.+..+..++|++.+.++. ++|..++.++.+.|. ..|++++.....+.+.+.. +
T Consensus 164 ~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~------~ 230 (287)
T 3pdu_A 164 VGQGARMKLVVNMIMGQMMTALGEGMALGRNC------GLDGGQLLEVLDAGA-MANPMFKGKGQMLLSGEFP------T 230 (287)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHST-TCCHHHHHHHHHHHHTCCC------C
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhcc-ccChHHHhhccccccCCCC------C
Confidence 57788999999999999999999999988753 499999999998773 5688777665555443211 1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011931 391 EFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 429 (474)
Q Consensus 391 ~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~ 429 (474)
.|. +.....+++.++..|-+.|+|+|.+.++...|..
T Consensus 231 ~~~--~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 267 (287)
T 3pdu_A 231 SFP--LKHMQKDLRLAVELGDRLGQPLHGAATANESFKR 267 (287)
T ss_dssp SSB--HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred CCc--HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 121 1123445799999999999999999998876653
No 353
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.36 E-value=0.0072 Score=61.99 Aligned_cols=99 Identities=20% Similarity=0.191 Sum_probs=65.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC-C---cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG-F---PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G-~---~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
.+||.|||+|.||+.++..++++. + +|++.|++.... +..+... .+++...|.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-------------------~~~~~~g----~~~~~~~Vd 69 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-------------------DVAQQYG----VSFKLQQIT 69 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-------------------CHHHHHT----CEEEECCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-------------------hHHhhcC----CceeEEecc
Confidence 468999999999999999999864 4 688888664321 1112111 344444554
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCC
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGV 134 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pv 134 (474)
+. .+++++.. .++.+++||+.+- +.....+.+.+.+.|++|+|..+
T Consensus 70 ad-nv~~~l~a---Ll~~~DvVIN~s~--~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 70 PQ-NYLEVIGS---TLEENDFLIDVSI--GISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp TT-THHHHTGG---GCCTTCEEEECCS--SSCHHHHHHHHHHHTCEEEESSC
T ss_pred ch-hHHHHHHH---HhcCCCEEEECCc--cccCHHHHHHHHHcCCCEEECCC
Confidence 43 44444433 3445699998653 34566777777888999999764
No 354
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.31 E-value=0.018 Score=60.00 Aligned_cols=112 Identities=19% Similarity=0.249 Sum_probs=67.8
Q ss_pred cCcEEEEcccHhHHH-HHHHHHHCCCcEEEEeCChH-HHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cC
Q 011931 7 LTRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTTS-KVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VK 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~~-~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~--vp 82 (474)
+++|.|||+|..|.+ +|+.|.+.|++|+++|..+. ..+++.+.+. .+..-.+.+. +.. +|+||.+ +|
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi-----~~~~g~~~~~-~~~---~d~vV~Spgi~ 92 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGA-----QIYFHHRPEN-VLD---ASVVVVSTAIS 92 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTC-----EEESSCCGGG-GTT---CSEEEECTTSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCC-----EEECCCCHHH-cCC---CCEEEECCCCC
Confidence 468999999999985 99999999999999997654 3444544432 1222223332 333 8999886 44
Q ss_pred CCh-hHHHHHH---------HHHhc-ccCC-CEEEecCCCCchhHHHHHHHHHHcCC
Q 011931 83 AGA-PVDETIK---------TLSAY-MEKG-DCIIDGGNEWYENTERREKAMAELGL 127 (474)
Q Consensus 83 ~~~-~v~~vl~---------~l~~~-l~~g-~iiId~st~~~~~~~~~~~~l~~~g~ 127 (474)
.+. .+....+ +++.. ++.. .|-|-.|+++-.++.-+...|+..|.
T Consensus 93 ~~~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 149 (494)
T 4hv4_A 93 ADNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGL 149 (494)
T ss_dssp TTCHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 432 2222211 22222 2222 25566677765555556677777774
No 355
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.29 E-value=0.0021 Score=64.00 Aligned_cols=95 Identities=13% Similarity=0.149 Sum_probs=57.3
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCC-----C-cEEEEe-C-ChHH-HHHHHHhhhhcCCCCcccc-CCHHHHHhhcCCCc
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKG-----F-PISVYN-R-TTSK-VDETVERAKKEGDLPLFGF-RDPESFVNSIQKPR 75 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G-----~-~V~v~d-r-~~~~-~~~l~~~~~~~~~~~~~~~-~s~~e~~~~l~~~d 75 (474)
|+||+|+| .|.+|+.+.+.|.+++ + +|..+. + +..+ +.......... ..+... .+.++ ... +|
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~--~~~~~~~~~~~~-~~~---~D 82 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPL--AHRVVEPTEAAV-LGG---HD 82 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGG--TTCBCEECCHHH-HTT---CS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccccc--ceeeeccCCHHH-hcC---CC
Confidence 46999999 9999999999999887 3 666554 2 2222 21110000000 011111 23333 334 99
Q ss_pred EEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCc
Q 011931 76 VIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWY 112 (474)
Q Consensus 76 vIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~ 112 (474)
+||+|+|... ..++...+ ..|..+||.|+..-
T Consensus 83 vVf~alg~~~-s~~~~~~~----~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 83 AVFLALPHGH-SAVLAQQL----SPETLIIDCGADFR 114 (352)
T ss_dssp EEEECCTTSC-CHHHHHHS----CTTSEEEECSSTTT
T ss_pred EEEECCCCcc-hHHHHHHH----hCCCEEEEECCCcc
Confidence 9999999873 34444333 56899999998763
No 356
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.28 E-value=0.011 Score=56.91 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=31.6
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCCh
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 40 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 40 (474)
|++|.|+|. |.+|+.++..|++.|++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 568999995 9999999999999999999999986
No 357
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.28 E-value=0.0089 Score=59.23 Aligned_cols=95 Identities=24% Similarity=0.244 Sum_probs=59.1
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhc-CCCCccccCCHHHHHhhcCCCcEEEEecCC
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKE-GDLPLFGFRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~-~~~~~~~~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
|.|||||| .|..|..|.+.|.++-. ++.........-+.+.+....- ....+.. .+.+++.++ +|++|+|+|.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~-~~~~~~~~~---~Dvvf~alp~ 88 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSE-FDPEKVSKN---CDVLFTALPA 88 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBC-CCHHHHHHH---CSEEEECCST
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEe-CCHHHhhcC---CCEEEECCCc
Confidence 56899997 89999999999998743 5655543222111122110000 0001222 245666566 9999999998
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+. .. ++.+.+ .|..|||.|+..
T Consensus 89 ~~-s~----~~~~~~-~g~~VIDlSsdf 110 (351)
T 1vkn_A 89 GA-SY----DLVREL-KGVKIIDLGADF 110 (351)
T ss_dssp TH-HH----HHHTTC-CSCEEEESSSTT
T ss_pred HH-HH----HHHHHh-CCCEEEECChhh
Confidence 73 33 344555 899999999875
No 358
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.27 E-value=0.014 Score=56.28 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=47.9
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCC-----hHHHHHHHHhhhhcCCCCccc----cCCHHHHHhhcCCCcE
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRT-----TSKVDETVERAKKEGDLPLFG----FRDPESFVNSIQKPRV 76 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~-----~~~~~~l~~~~~~~~~~~~~~----~~s~~e~~~~l~~~dv 76 (474)
+|+|.|+| .|.+|+.++..|++.|++|++.+|+ +++.+.+..... . ++.. ..+.+++.+.++++|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~-~---~~~~~~~D~~d~~~l~~~~~~~d~ 79 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ-L---GAKLIEASLDDHQRLVDALKQVDV 79 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT-T---TCEEECCCSSCHHHHHHHHTTCSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHh-C---CeEEEeCCCCCHHHHHHHHhCCCE
Confidence 57899999 5999999999999999999999998 445443322110 0 1111 1233444444445888
Q ss_pred EEEecCC
Q 011931 77 IIMLVKA 83 (474)
Q Consensus 77 Iil~vp~ 83 (474)
||.+...
T Consensus 80 vi~~a~~ 86 (313)
T 1qyd_A 80 VISALAG 86 (313)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 8877654
No 359
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.26 E-value=0.023 Score=55.93 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=61.2
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCC--c-----EEEEeCCh--HHHHHHHHhhhhcC-CC--CccccCCHHHHHhhcCC
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGF--P-----ISVYNRTT--SKVDETVERAKKEG-DL--PLFGFRDPESFVNSIQK 73 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~--~-----V~v~dr~~--~~~~~l~~~~~~~~-~~--~~~~~~s~~e~~~~l~~ 73 (474)
-+||+|+| +|.+|.+++..|+..|. + +.++|+++ ++++.......+.. .+ ++....+..+..+.
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~d--- 79 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKD--- 79 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTT---
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCC---
Confidence 35899999 89999999999998876 5 99999975 33333222211100 00 12334455555555
Q ss_pred CcEEEEecCCCh---------------hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 74 PRVIIMLVKAGA---------------PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 74 ~dvIil~vp~~~---------------~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+|+||++...+. .++++++.+..+-.++..|+..||-
T Consensus 80 aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 999999763221 1334445555544334457777763
No 360
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=96.25 E-value=0.026 Score=53.16 Aligned_cols=90 Identities=11% Similarity=0.145 Sum_probs=57.5
Q ss_pred CCCCCCcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 1 MVEGKQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 1 m~~~~~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
|+.....+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+-.
T Consensus 2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~ 61 (259)
T 4e6p_A 2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG-----------------PA---AYAVQM 61 (259)
T ss_dssp --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----------------TT---EEEEEC
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----------------CC---ceEEEe
Confidence 33333334566776 7899999999999999999999999988776654321 00 112222
Q ss_pred ecCCChhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
=+.+...++.+++++.....+=+++|++...
T Consensus 62 D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 62 DVTRQDSIDAAIAATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHSSSCCEEEECCCC
T ss_pred eCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 2334445666666666655555777776654
No 361
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=96.19 E-value=0.017 Score=54.33 Aligned_cols=81 Identities=10% Similarity=0.116 Sum_probs=55.2
Q ss_pred CcEEEE--cccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 8 TRIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.|..+| |.+-+|.++|+.|++.|++|.+.||++++.+++.+++.. +..+-.=+.+..
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~---------------------~~~~~~Dv~~~~ 60 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN---------------------LFYFHGDVADPL 60 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTT---------------------EEEEECCTTSHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC---------------------EEEEEecCCCHH
Confidence 355555 588899999999999999999999998877665543210 112222234445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st 109 (474)
+++.+++++...+.+=+++|+...
T Consensus 61 ~v~~~v~~~~~~~g~iDiLVNNAG 84 (247)
T 3ged_A 61 TLKKFVEYAMEKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCC
Confidence 677777777666666677777654
No 362
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.18 E-value=0.0023 Score=63.81 Aligned_cols=68 Identities=24% Similarity=0.499 Sum_probs=49.8
Q ss_pred CCCCHHHHHHHHHhhccCc-chhhhHhhhcccccccccCCCcchHHHHhhhcCCCccHHHHHHHHHHcCCCcccHHHHH
Q 011931 215 GKLTNEELQNVFTEWNKGE-LLSFLIEITADIFGIKDDKGDGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIEERV 292 (474)
Q Consensus 215 G~l~~~~~~~~~~~~~~~~-~~s~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~k~tg~~~~~~a~~~gv~~p~~~~r~ 292 (474)
| ++.+++.++ |+.|. +.||+++++.+++... |. ++.+.+.+.++|+|+|+++.|.+.|+|+|++...+
T Consensus 259 ~-~d~~~i~~~---~~~g~~~~s~~l~~~~~~~~~~----p~--~~~~~~~~~d~g~~r~~~~~A~~~gvp~p~~~~al 327 (358)
T 4e21_A 259 D-LDLADITEV---WRRGSVISSWLLDLSATALLDS----PD--LQEFQGRVSDSGEGRWTVAAAIDEGVPAHVLSSAL 327 (358)
T ss_dssp C-CCHHHHHHH---HTTTSTTCBHHHHHHHHHHHHC----TT--CTTC--CCCCCSHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred C-CCHHHHHHH---HhCccHHHHHHHHHHHHHHhhC----CC--hHHHHHHHHhcCcHHHHHHHHHHcCCChHHHHHHH
Confidence 5 777776555 78876 7999999998888652 21 12233445568899999999999999999996543
No 363
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.18 E-value=0.0041 Score=65.91 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=63.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHh--hcCCCcEEEEecCCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVN--SIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~--~l~~~dvIil~vp~~~ 85 (474)
++|.|+|+|.+|..+|+.|.+.|++|.+.|.++++++++. .. +....+..++.. .++++|.+|++++++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-~~-------i~gD~t~~~~L~~agi~~ad~vi~~~~~d- 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-VV-------VYGDATVGQTLRQAGIDRASGIIVTTNDD- 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-CE-------EESCSSSSTHHHHHTTTSCSEEEECCSCH-
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-CE-------EEeCCCCHHHHHhcCccccCEEEEECCCc-
Confidence 6799999999999999999999999999999998766542 10 122222223322 256799999999875
Q ss_pred hHHHHHHHHHhcccCC-CEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKG-DCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g-~iiId~st~ 110 (474)
...-.+..++..+.+. .+|.-..+.
T Consensus 420 ~~ni~~~~~ak~l~~~~~iiar~~~~ 445 (565)
T 4gx0_A 420 STNIFLTLACRHLHSHIRIVARANGE 445 (565)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEESST
T ss_pred hHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3333334445556666 455544443
No 364
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.18 E-value=0.013 Score=55.35 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=30.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCCh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTT 40 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~ 40 (474)
..+|.|||+|.+|+.++.+|+..|. +++++|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3589999999999999999999997 788998774
No 365
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.08 E-value=0.0088 Score=59.41 Aligned_cols=96 Identities=10% Similarity=0.126 Sum_probs=55.1
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCC-CcEEEEe-CChHHHHHHHHhhhhc-------CCCCccccC-CHHHHHhhcCCCc
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKG-FPISVYN-RTTSKVDETVERAKKE-------GDLPLFGFR-DPESFVNSIQKPR 75 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G-~~V~v~d-r~~~~~~~l~~~~~~~-------~~~~~~~~~-s~~e~~~~l~~~d 75 (474)
|+||||+| .|.+|+.+.+.|.++. ++|.... .+....+.+.+..... ++..+.... +++++ +. +|
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~---vD 79 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYEDH-KD---VD 79 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGGG-TT---CS
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHHh-cC---CC
Confidence 56899999 8999999999988764 4676553 2222211121110000 000112211 33443 44 99
Q ss_pred EEEEecCCChhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 76 VIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 76 vIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+||+|+|.. ...+.... +++.|..|||.|+.
T Consensus 80 vVf~atp~~-~s~~~a~~---~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 80 VVLSALPNE-LAESIELE---LVKNGKIVVSNASP 110 (350)
T ss_dssp EEEECCCHH-HHHHHHHH---HHHTTCEEEECSST
T ss_pred EEEECCChH-HHHHHHHH---HHHCCCEEEECCcc
Confidence 999999975 33333333 34568889999875
No 366
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=96.08 E-value=0.025 Score=53.23 Aligned_cols=82 Identities=11% Similarity=0.020 Sum_probs=53.6
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+-.=+.+...+
T Consensus 10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~~~~~v 69 (255)
T 4eso_A 10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-----------------PR---VHALRSDIADLNEI 69 (255)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----------------GG---EEEEECCTTCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----------------Cc---ceEEEccCCCHHHH
Confidence 455555 7899999999999999999999999988776654321 01 12222223344456
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++.+.....+=+++|++...
T Consensus 70 ~~~~~~~~~~~g~id~lv~nAg~ 92 (255)
T 4eso_A 70 AVLGAAAGQTLGAIDLLHINAGV 92 (255)
T ss_dssp HHHHHHHHHHHSSEEEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 66666665555444677776544
No 367
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.07 E-value=0.035 Score=56.08 Aligned_cols=114 Identities=15% Similarity=0.177 Sum_probs=75.4
Q ss_pred CcEEEEcccHhHHHHHHHHHH-CCCcEE-EEeC----------ChHHHHHHHHhhhhcCCC-CccccCCHHHHHhhcCCC
Q 011931 8 TRIGLAGLAVMGQNLALNIAE-KGFPIS-VYNR----------TTSKVDETVERAKKEGDL-PLFGFRDPESFVNSIQKP 74 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~-~G~~V~-v~dr----------~~~~~~~l~~~~~~~~~~-~~~~~~s~~e~~~~l~~~ 74 (474)
++|+|.|.|+||+..+..|.+ .|.+|+ +.|. +++.+.++.+....-.++ +... .+.+++... .|
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~-~~~~eil~~--~~ 286 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGER-ITNEELLEL--DV 286 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEE-ECHHHHTTC--SC
T ss_pred CEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceE-cCchhhhcC--CC
Confidence 579999999999999999999 999887 6676 677777766542110000 0111 145555431 49
Q ss_pred cEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 75 RVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 75 dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
|+++-|.....-.. +-.+.+ .-.+|+..+|... +.+..+.+.++|+.++.
T Consensus 287 DIliP~A~~n~i~~----~~a~~l-~ak~V~EgAN~p~--t~~a~~~l~~~Gi~~~P 336 (415)
T 2tmg_A 287 DILVPAALEGAIHA----GNAERI-KAKAVVEGANGPT--TPEADEILSRRGILVVP 336 (415)
T ss_dssp SEEEECSSTTSBCH----HHHTTC-CCSEEECCSSSCB--CHHHHHHHHHTTCEEEC
T ss_pred cEEEecCCcCccCc----ccHHHc-CCeEEEeCCCccc--CHHHHHHHHHCCCEEEC
Confidence 99999877653212 223334 5678888888763 45666778889988774
No 368
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.04 E-value=0.029 Score=54.71 Aligned_cols=71 Identities=14% Similarity=0.251 Sum_probs=46.1
Q ss_pred CcEEEEcc-cHhHHHHHHHHHHCCC--cEEEEeC--ChHHHHH----HHHhhhhcCCCCccccC---CHHHHHhhcCCCc
Q 011931 8 TRIGLAGL-AVMGQNLALNIAEKGF--PISVYNR--TTSKVDE----TVERAKKEGDLPLFGFR---DPESFVNSIQKPR 75 (474)
Q Consensus 8 ~~IgiIGl-G~mG~~lA~~L~~~G~--~V~v~dr--~~~~~~~----l~~~~~~~~~~~~~~~~---s~~e~~~~l~~~d 75 (474)
|||.|+|+ |.+|.+++..|+..|+ ++.++|+ ++++++. +....... +.+..... ++.++.+. +|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~-~~~~~i~~~~d~l~~al~g---aD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGT-RSDANIYVESDENLRIIDE---SD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTS-CCCCEEEEEETTCGGGGTT---CS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhc-CCCeEEEeCCcchHHHhCC---CC
Confidence 58999999 9999999999998885 6889999 7655432 22211100 00112221 13455555 99
Q ss_pred EEEEecC
Q 011931 76 VIIMLVK 82 (474)
Q Consensus 76 vIil~vp 82 (474)
+||++.-
T Consensus 77 ~Vi~~Ag 83 (313)
T 1hye_A 77 VVIITSG 83 (313)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9999874
No 369
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.04 E-value=0.021 Score=57.99 Aligned_cols=115 Identities=12% Similarity=0.118 Sum_probs=75.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEE-EEeC----------ChHHHHHHHHhhhhcCCC-CccccCCHHHHHhhcCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNR----------TTSKVDETVERAKKEGDL-PLFGFRDPESFVNSIQKP 74 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr----------~~~~~~~l~~~~~~~~~~-~~~~~~s~~e~~~~l~~~ 74 (474)
-++|+|.|.|++|+..|+.|.+.|.+|+ +.|+ +.+.+.++.+......++ ... ..+.+++.. ..|
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~-~i~~~ei~~--~~~ 311 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAE-PLPAADFWG--LPV 311 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSE-ECCHHHHTT--CCC
T ss_pred CCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCce-EcCchhhhc--CCC
Confidence 3579999999999999999999999887 6677 667776666542110000 011 124455543 149
Q ss_pred cEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 75 RVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 75 dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
|+++-|.....-. .+-++.+ .-.+|+..+|... +.+..+.+.++|+.|+.
T Consensus 312 DIlvPcA~~n~i~----~~na~~l-~ak~VvEgAN~p~--t~eA~~iL~~~GI~~~P 361 (440)
T 3aog_A 312 EFLVPAALEKQIT----EQNAWRI-RARIVAEGANGPT--TPAADDILLEKGVLVVP 361 (440)
T ss_dssp SEEEECSSSSCBC----TTTGGGC-CCSEEECCSSSCB--CHHHHHHHHHHTCEEEC
T ss_pred cEEEecCCcCccc----hhhHHHc-CCcEEEecCcccc--CHHHHHHHHHCCCEEEC
Confidence 9999987654211 1222334 5678888888763 45666778889998774
No 370
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.02 E-value=0.0055 Score=56.25 Aligned_cols=33 Identities=15% Similarity=0.449 Sum_probs=31.0
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTT 40 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~ 40 (474)
..|.|||+|.-|...|..|+++|++|+++|+++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 469999999999999999999999999999875
No 371
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.02 E-value=0.017 Score=58.80 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=70.7
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC---cEEEEe----CC----hH-H---HHHHHHhhhhcCCCCc-cccCCHHHHHhh
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF---PISVYN----RT----TS-K---VDETVERAKKEGDLPL-FGFRDPESFVNS 70 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~---~V~v~d----r~----~~-~---~~~l~~~~~~~~~~~~-~~~~s~~e~~~~ 70 (474)
..+|.|+|+|.+|.+++..|.+.|. +|+++| |+ .. . +..+.+..... .+. ....++.++++.
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~--~~~~~~~~~L~e~l~~ 263 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKK--TNGENIEGGPQEALKD 263 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTT--SCTTCCCSSHHHHHTT
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhc--cccccccccHHHHhcc
Confidence 3579999999999999999999998 899999 87 32 2 21111111100 001 013467777776
Q ss_pred cCCCcEEEEecCC--ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEE
Q 011931 71 IQKPRVIIMLVKA--GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYL 130 (474)
Q Consensus 71 l~~~dvIil~vp~--~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v 130 (474)
+|+||-++|. +. ... .....+.++.+|+|+++-.++...+ ...+.|...+
T Consensus 264 ---aDVlInaT~~~~G~-~~~---e~v~~m~~~~iVfDLynP~~t~~~~---~A~~~G~~iv 315 (439)
T 2dvm_A 264 ---ADVLISFTRPGPGV-IKP---QWIEKMNEDAIVFPLANPVPEILPE---EAKKAGARIV 315 (439)
T ss_dssp ---CSEEEECSCCCSSS-SCH---HHHTTSCTTCEEEECCSSSCSSCHH---HHHHHTCSEE
T ss_pred ---CCEEEEcCCCccCC-CCh---HHHHhcCCCCEEEECCCCCCcchHH---HHHHcCCeEE
Confidence 9999999997 42 211 2334567888999996654433322 3334466555
No 372
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.01 E-value=0.043 Score=53.29 Aligned_cols=43 Identities=14% Similarity=0.268 Sum_probs=36.9
Q ss_pred CcCcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011931 6 QLTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (474)
Q Consensus 6 ~~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (474)
+.++|.|.|. |.+|+.++..|++.|++|++.+|++++.+.+.+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~ 53 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK 53 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHH
Confidence 4468999986 999999999999999999999999887665543
No 373
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.98 E-value=0.033 Score=56.37 Aligned_cols=111 Identities=19% Similarity=0.258 Sum_probs=76.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEE-EEeC----------ChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPIS-VYNR----------TTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKP 74 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr----------~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~~l~~~ 74 (474)
-++|.|.|.|++|+..|+.|.+.|.+|+ +.|+ +.+.+.++.+... .+.. .-+.+++... .|
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g-----~v~~~~~~~~e~~~~--~~ 290 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATG-----SLPRLDLAPEEVFGL--EA 290 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHS-----SCSCCCBCTTTGGGS--SC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhC-----Ccceeeccchhhhcc--Cc
Confidence 3579999999999999999999999988 7788 7777777766532 1110 1122333321 39
Q ss_pred cEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 75 RVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 75 dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
|+++-|..... +. ..-.+.+ .=++|+..+|... |.+..+.|.++|+.|+.
T Consensus 291 DVliP~A~~n~-i~---~~~A~~l-~ak~V~EgAN~p~--t~~A~~~L~~~Gi~~~P 340 (419)
T 3aoe_E 291 EVLVLAAREGA-LD---GDRARQV-QAQAVVEVANFGL--NPEAEAYLLGKGALVVP 340 (419)
T ss_dssp SEEEECSCTTC-BC---HHHHTTC-CCSEEEECSTTCB--CHHHHHHHHHHTCEEEC
T ss_pred eEEEecccccc-cc---cchHhhC-CceEEEECCCCcC--CHHHHHHHHHCCCEEEC
Confidence 99998876542 22 2223444 3468999998763 45666788899998874
No 374
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.97 E-value=0.033 Score=52.65 Aligned_cols=84 Identities=11% Similarity=0.133 Sum_probs=59.6
Q ss_pred cEEEE--cccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 9 ~IgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
|+.+| |.+-+|.++|+.|++.|.+|.++||++++++++.++....+ .. +..+..=+.+..+
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--------------~~---~~~~~~Dvt~~~~ 70 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--------------KE---VLGVKADVSKKKD 70 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--------------CC---EEEEECCTTSHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--------------Cc---EEEEEccCCCHHH
Confidence 56777 57889999999999999999999999998887765432110 00 2222223455567
Q ss_pred HHHHHHHHHhcccCCCEEEecCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st 109 (474)
++.+++++.....+=+++|+...
T Consensus 71 v~~~~~~~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 71 VEEFVRRTFETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCc
Confidence 77778777777766688888664
No 375
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.94 E-value=0.017 Score=55.39 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=31.3
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCCh
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 40 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 40 (474)
|++|.|+|. |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 578999995 9999999999999999999999973
No 376
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.94 E-value=0.042 Score=53.80 Aligned_cols=72 Identities=15% Similarity=0.242 Sum_probs=46.2
Q ss_pred CcEEEEcc-cHhHHHHHHHHHHCCC-------cEEEEeCCh--HHHHHHHHhhhhcC-CC--CccccCCHHHHHhhcCCC
Q 011931 8 TRIGLAGL-AVMGQNLALNIAEKGF-------PISVYNRTT--SKVDETVERAKKEG-DL--PLFGFRDPESFVNSIQKP 74 (474)
Q Consensus 8 ~~IgiIGl-G~mG~~lA~~L~~~G~-------~V~v~dr~~--~~~~~l~~~~~~~~-~~--~~~~~~s~~e~~~~l~~~ 74 (474)
|||.|+|. |.+|++++..|++.|+ +|.++|+++ ++.+.......... .+ ++....+..++++. +
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~---~ 81 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKD---A 81 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTT---C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCC---C
Confidence 58999996 9999999999999996 899999975 22222111111000 00 12223455555555 9
Q ss_pred cEEEEecC
Q 011931 75 RVIIMLVK 82 (474)
Q Consensus 75 dvIil~vp 82 (474)
|+||.+..
T Consensus 82 D~Vih~Ag 89 (327)
T 1y7t_A 82 DYALLVGA 89 (327)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99998753
No 377
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.92 E-value=0.0048 Score=61.48 Aligned_cols=35 Identities=9% Similarity=0.266 Sum_probs=27.4
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCC----CcEE-EEeCCh
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKG----FPIS-VYNRTT 40 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G----~~V~-v~dr~~ 40 (474)
+++||||||+|.||+.++..|.+.. .+|. ++|+++
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~ 42 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAER 42 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSB
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECCh
Confidence 3568999999999999999999863 4554 667643
No 378
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.88 E-value=0.033 Score=55.16 Aligned_cols=96 Identities=14% Similarity=0.221 Sum_probs=56.8
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEEEEe--C-ChHHHHHHHHhhhhcCCC----------------Ccccc--CCH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPISVYN--R-TTSKVDETVERAKKEGDL----------------PLFGF--RDP 64 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~v~d--r-~~~~~~~l~~~~~~~~~~----------------~~~~~--~s~ 64 (474)
|+||||+|+|.+|+.+.+.|.++ .++|...+ + +.+....+.+.....+.+ .+... .++
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp 96 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDP 96 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCG
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCCh
Confidence 56999999999999999999887 57777554 2 333333332211100000 01122 244
Q ss_pred HHHH---hhcCCCcEEEEecCCChhHHHHHHHHHhcccCCC--EEEecCC
Q 011931 65 ESFV---NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGD--CIIDGGN 109 (474)
Q Consensus 65 ~e~~---~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~--iiId~st 109 (474)
+++. .. +|+||.|+|.....+ ....+++.|. +|||.+.
T Consensus 97 ~~i~w~~~~---vDvV~eatg~~~s~e----~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 97 AEIPWGASG---AQIVCESTGVFTTEE----KASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GGCCHHHHT---CCEEEECSSSCCSHH----HHGGGGTTTCSEEEESSCC
T ss_pred HHCCcccCC---CCEEEECCCchhhHH----HHHHHHHcCCcEEEEeCCC
Confidence 4431 23 899999999874432 2234566777 8998876
No 379
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.88 E-value=0.018 Score=56.50 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=31.2
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEEEEeCCh
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTT 40 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~v~dr~~ 40 (474)
+|+|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 468999996 9999999999999999999999976
No 380
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.86 E-value=0.034 Score=58.26 Aligned_cols=113 Identities=11% Similarity=0.067 Sum_probs=68.6
Q ss_pred cCcEEEEcccHhHHH-HHHHHHHCCCcEEEEeCCh--HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--c
Q 011931 7 LTRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTT--SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--V 81 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~--~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~--v 81 (474)
.++|-|||.|..|.+ +|+.|.+.|++|+++|.+. ...+++.+.+. .+..-.+++.+... +|+||.+ +
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi-----~~~~G~~~~~~~~~---~d~vV~Spgi 90 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGV-----TIEEGYLIAHLQPA---PDLVVVGNAM 90 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTC-----EEEESCCGGGGCSC---CSEEEECTTC
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCC-----EEECCCCHHHcCCC---CCEEEECCCc
Confidence 468999999999986 7888999999999999863 34455655442 12222344444333 8999885 4
Q ss_pred CCCh-hHHHHHH---------HHHh-cc-cCC-CEEEecCCCCchhHHHHHHHHHHcCC
Q 011931 82 KAGA-PVDETIK---------TLSA-YM-EKG-DCIIDGGNEWYENTERREKAMAELGL 127 (474)
Q Consensus 82 p~~~-~v~~vl~---------~l~~-~l-~~g-~iiId~st~~~~~~~~~~~~l~~~g~ 127 (474)
|.+. .+....+ +++. .+ +.. -|-|-.|+++-.++.-+...|+..|.
T Consensus 91 ~~~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~ 149 (524)
T 3hn7_A 91 KRGMDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGI 149 (524)
T ss_dssp CTTSHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 4432 2332221 2222 22 222 35566677765555556677777664
No 381
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=95.84 E-value=0.055 Score=50.95 Aligned_cols=90 Identities=10% Similarity=0.057 Sum_probs=57.2
Q ss_pred CCCCCCcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 1 MVEGKQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 1 m~~~~~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
|....+.++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+... .. ...+..
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~ 60 (260)
T 1nff_A 1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----------------DA---ARYVHL 60 (260)
T ss_dssp -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----------------GG---EEEEEC
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----------------cC---ceEEEe
Confidence 43333334566776 7899999999999999999999999887766543211 01 122222
Q ss_pred ecCCChhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
=+.+...++.+++++.....+=+++|++...
T Consensus 61 D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~ 91 (260)
T 1nff_A 61 DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI 91 (260)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 2334445666666666555555777776654
No 382
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.79 E-value=0.082 Score=51.26 Aligned_cols=105 Identities=15% Similarity=0.247 Sum_probs=77.3
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCcchhhhHHHHHHHHhhCCCCCCCccC
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVD 389 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gcii~s~ll~~~~~~~~~~~~l~~ll~~ 389 (474)
+.+.++.+|.+.|.+..+.+..++|++.+.++. ++|..++.++.+.| ...|++++.....+.+.+.-
T Consensus 183 ~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~------G~d~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~------ 249 (310)
T 3doj_A 183 QVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKS------GLSSDTLLDILDLG-AMTNPMFKGKGPSMNKSSYP------ 249 (310)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TSCHHHHHHHHHHS-TTCCHHHHHHHHHHHTTCCC------
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHhc-ccccHHHHHHhhhhhcCCCC------
Confidence 357788999999999999999999999998853 39999999999876 34577766544444333211
Q ss_pred hHHHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011931 390 PEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 429 (474)
Q Consensus 390 ~~~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~ 429 (474)
+-|. +.-...+++-++..|-+.|+|+|.+.++...|..
T Consensus 250 ~~f~--~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 287 (310)
T 3doj_A 250 PAFP--LKHQQKDMRLALALGDENAVSMPVAAAANEAFKK 287 (310)
T ss_dssp CSSB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CCcc--HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 1121 1123445688999999999999999998876653
No 383
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.78 E-value=0.007 Score=58.50 Aligned_cols=38 Identities=18% Similarity=0.312 Sum_probs=32.3
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHH
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVD 44 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~ 44 (474)
+|+|.|.| .|.+|+.++..|++.|++|++.+|+++..+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 40 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA 40 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc
Confidence 57899998 799999999999999999999999955433
No 384
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.74 E-value=0.019 Score=55.79 Aligned_cols=100 Identities=10% Similarity=0.066 Sum_probs=71.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCc-chhhhHHHHHHHHhhCCCCCCCccCh
Q 011931 312 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCI-IRAVFLDRIKKAYDRNADLANLLVDP 390 (474)
Q Consensus 312 ~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gci-i~s~ll~~~~~~~~~~~~l~~ll~~~ 390 (474)
++++.+| .+.++.+..++|++.+.++. ++|..++.++++.+.- .+|++++.....+.++.. . +
T Consensus 174 g~g~~~k----~~~~~~~~~~~Ea~~la~~~------Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~-~-----~ 237 (306)
T 3l6d_A 174 AFATVLH----AHAFAAMVTFFEAVGAGDRF------GLPVSKTARLLLETSRFFVADALEEAVRRLETQDF-K-----G 237 (306)
T ss_dssp HHHHHHH----HHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-C-----T
T ss_pred cHHHHHH----HHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCC-C-----C
Confidence 4556666 67788999999999987753 4999999999987632 578888776555544321 1 1
Q ss_pred H-HHHHHHhhhhhHHHHHHHHHHcCCChHHHHHHHHHHHh
Q 011931 391 E-FAKEIVDRQSAWRRVVCLAINSGISTPGMSSSLAYFDS 429 (474)
Q Consensus 391 ~-~~~~~~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~~ 429 (474)
. |. +.-...+++.++..|-+.|+|+|.+.++...|..
T Consensus 238 ~~~~--~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~ 275 (306)
T 3l6d_A 238 DQAR--LDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQR 275 (306)
T ss_dssp TSSB--HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred Cccc--HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 1 11 1122345689999999999999999999886654
No 385
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.73 E-value=0.0038 Score=62.34 Aligned_cols=92 Identities=9% Similarity=0.116 Sum_probs=53.9
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCCc---EEEEeCChHHHHHHHHhhhhcCCCCcccc-CCHHHHHhhcCCCcEEEEec
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGFP---ISVYNRTTSKVDETVERAKKEGDLPLFGF-RDPESFVNSIQKPRVIIMLV 81 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~~---V~v~dr~~~~~~~l~~~~~~~~~~~~~~~-~s~~e~~~~l~~~dvIil~v 81 (474)
++||+||| .|..|..|.+.|.+++|+ +.........-+.+.-.+. ..... .+.++ .+ .+|+||+|+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~-----~~~~~~~~~~~-~~---~~Dvvf~a~ 72 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQ-----DITIEETTETA-FE---GVDIALFSA 72 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTE-----EEEEEECCTTT-TT---TCSEEEECS
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCC-----CceEeeCCHHH-hc---CCCEEEECC
Confidence 46899999 899999999999988773 3333321110000000000 01111 12222 23 499999999
Q ss_pred CCChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 82 KAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 82 p~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
|.. ...+....+ +..|..|||.|+..
T Consensus 73 ~~~-~s~~~a~~~---~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 73 GSS-TSAKYAPYA---VKAGVVVVDNTSYF 98 (366)
T ss_dssp CHH-HHHHHHHHH---HHTTCEEEECSSTT
T ss_pred ChH-hHHHHHHHH---HHCCCEEEEcCCcc
Confidence 875 334444333 45789999999864
No 386
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.72 E-value=0.0071 Score=60.40 Aligned_cols=35 Identities=23% Similarity=0.572 Sum_probs=32.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTS 41 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~ 41 (474)
.|||.|||+|..|..+|..|+++|++|++++++++
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 37999999999999999999999999999998753
No 387
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.70 E-value=0.029 Score=53.15 Aligned_cols=83 Identities=12% Similarity=0.186 Sum_probs=55.5
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE--EecCCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII--MLVKAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi--l~vp~~~ 85 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.+ +=+.+..
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~---~~~~~~~~Dv~d~~ 66 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA----------------G---GTALAQVLDVTDRH 66 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----------------T---CEEEEEECCTTCHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------C---CcEEEEEcCCCCHH
Confidence 355556 688999999999999999999999998877765533210 0 22222 2234445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++.+.....+=+++|++...
T Consensus 67 ~v~~~~~~~~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 67 SVAAFAQAAVDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5666666666655556777776654
No 388
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.70 E-value=0.05 Score=50.42 Aligned_cols=83 Identities=14% Similarity=0.201 Sum_probs=54.5
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+...
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~D~~~~~~ 63 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----------------NA---VIGIVADLAHHED 63 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----------------GG---EEEEECCTTSHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----------------CC---ceEEECCCCCHHH
Confidence 3466666 6899999999999999999999999988776554321 01 2222222334445
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++.+.....+=+++|++...
T Consensus 64 v~~~~~~~~~~~g~id~lvnnAg~ 87 (235)
T 3l6e_A 64 VDVAFAAAVEWGGLPELVLHCAGT 87 (235)
T ss_dssp HHHHHHHHHHHHCSCSEEEEECCC
T ss_pred HHHHHHHHHHhcCCCcEEEECCCC
Confidence 666666665555455677776554
No 389
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=95.70 E-value=0.06 Score=50.36 Aligned_cols=100 Identities=10% Similarity=0.091 Sum_probs=58.0
Q ss_pred CCCCCCcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE
Q 011931 1 MVEGKQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM 79 (474)
Q Consensus 1 m~~~~~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil 79 (474)
|....+.++|-|.| .|.+|..+++.|++.|++|++.+|++++.+++.+.... . ...+.... .+..++..
T Consensus 1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~-~~~~~~~~-~~~~~~~~ 70 (264)
T 2pd6_A 1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGG--------P-GSKEGPPR-GNHAAFQA 70 (264)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC----------------------CCEEEEC
T ss_pred CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh--------c-CccccccC-cceEEEEe
Confidence 33333334577776 79999999999999999999999999887766543210 0 00000000 00222322
Q ss_pred ecCCChhHHHHHHHHHhcccCC-CEEEecCCC
Q 011931 80 LVKAGAPVDETIKTLSAYMEKG-DCIIDGGNE 110 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g-~iiId~st~ 110 (474)
=+.+...++.+++.+.....+= ++||++...
T Consensus 71 D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~ 102 (264)
T 2pd6_A 71 DVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102 (264)
T ss_dssp CTTSHHHHHHHHHHHHHHHSSCCSEEEECCCC
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 2334445666666665544443 788887654
No 390
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.70 E-value=0.014 Score=55.61 Aligned_cols=71 Identities=14% Similarity=0.177 Sum_probs=48.9
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--~~s~~e~~~~l~~~dvIil~vp~ 83 (474)
|+|.|.| .|.+|+.++..|.+. |++|.+.+|++++...+...+. .+.. ..+.+++.+.++.+|+||.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v-----~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKV-----SVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTB-----EEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCC-----EEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 5799999 699999999999998 9999999999887544322111 0111 12444444445558888887654
No 391
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.70 E-value=0.04 Score=58.17 Aligned_cols=97 Identities=12% Similarity=0.111 Sum_probs=62.3
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh-hhhcCCCCccccCCHHHHHhh--cCCCcEEEEecCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER-AKKEGDLPLFGFRDPESFVNS--IQKPRVIIMLVKA 83 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-~~~~~~~~~~~~~s~~e~~~~--l~~~dvIil~vp~ 83 (474)
.++|-|+|.|.+|..++..|.+.|++|++.|.++++++++.+. +... +....+..+.... ++++|.+|+ +++
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~----i~Gd~~~~~~L~~a~i~~a~~vi~-t~~ 201 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKV----VYGSPTDAHVLAGLRVAAARSIIA-NLS 201 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEE----EESCTTCHHHHHHTTGGGCSEEEE-CSC
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeE----EEeCCCCHHHHHhcCcccCCEEEE-eCC
Confidence 4579999999999999999999999999999999999888765 3210 1222222333322 446999987 444
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st 109 (474)
+ .....+-..+..+..-.++.-..+
T Consensus 202 D-~~n~~~~~~ar~~~~~~iiar~~~ 226 (565)
T 4gx0_A 202 D-PDNANLCLTVRSLCQTPIIAVVKE 226 (565)
T ss_dssp H-HHHHHHHHHHHTTCCCCEEEECSS
T ss_pred c-HHHHHHHHHHHHhcCceEEEEECC
Confidence 3 333222223334444455554433
No 392
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=95.68 E-value=0.042 Score=52.48 Aligned_cols=82 Identities=13% Similarity=0.123 Sum_probs=56.7
Q ss_pred cEEEE--cccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 9 ~IgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
|+++| |.+-+|.++|+.|++.|.+|.+.+|+++++++..++... . +-.+-.=+.+..+
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~-----------------~---~~~~~~Dv~~~~~ 89 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG-----------------G---AVGIQADSANLAE 89 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT-----------------T---CEEEECCTTCHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-----------------C---eEEEEecCCCHHH
Confidence 67777 567899999999999999999999999988776654311 1 2222222444556
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=+++|+....
T Consensus 90 v~~~~~~~~~~~G~iDiLVNNAG~ 113 (273)
T 4fgs_A 90 LDRLYEKVKAEAGRIDVLFVNAGG 113 (273)
T ss_dssp HHHHHHHHHHHHSCEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 777777776665555677776543
No 393
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=95.67 E-value=0.049 Score=51.70 Aligned_cols=85 Identities=13% Similarity=0.162 Sum_probs=57.7
Q ss_pred cEEEE--cccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 9 ~IgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
|+.+| |.|-+|..+|+.|++.|++|.+.+|++++.+++.+.... .-.. ...+.+=+.+...
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~---~~~~~~Dv~d~~~ 91 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ--------------AGLE---GRGAVLNVNDATA 91 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH--------------HTCC---CEEEECCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------------cCCc---EEEEEEeCCCHHH
Confidence 45555 478999999999999999999999999887766543211 0011 3334344455556
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=+++|++...
T Consensus 92 v~~~~~~~~~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 92 VDALVESTLKEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 777777776666556788887654
No 394
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=95.65 E-value=0.032 Score=53.30 Aligned_cols=83 Identities=14% Similarity=0.117 Sum_probs=55.1
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~~ 85 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+..
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~~~~ 70 (280)
T 3tox_A 10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG----------------G---GEAAALAGDVGDEA 70 (280)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT----------------T---CCEEECCCCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------C---CcEEEEECCCCCHH
Confidence 344445 689999999999999999999999998887766543110 0 222222 233344
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++.+.....+=+++|++...
T Consensus 71 ~v~~~~~~~~~~~g~iD~lvnnAg~ 95 (280)
T 3tox_A 71 LHEALVELAVRRFGGLDTAFNNAGA 95 (280)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5666666666655556778877654
No 395
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.64 E-value=0.011 Score=58.75 Aligned_cols=92 Identities=12% Similarity=0.185 Sum_probs=55.4
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCC-CcEEEE-eCCh--HHHHHHHH---------hhhhcCCCCcccc-CCHHHHHhhc
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKG-FPISVY-NRTT--SKVDETVE---------RAKKEGDLPLFGF-RDPESFVNSI 71 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G-~~V~v~-dr~~--~~~~~l~~---------~~~~~~~~~~~~~-~s~~e~~~~l 71 (474)
++|||||| .|..|..|.+.|.++- .++... .++. .++..... ... ..... .+.+++ +
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~-----~~~v~~~~~~~~-~-- 78 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIA-----DMEIKPTDPKLM-D-- 78 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHH-----TCBCEECCGGGC-T--
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccc-----cceEEeCCHHHh-c--
Confidence 46899999 7999999999887653 355533 3332 12222100 000 01111 133332 3
Q ss_pred CCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 72 QKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 72 ~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
.+|+||+|+|.+. ..+....+ +..|..|||.|+-.
T Consensus 79 -~vDvvf~a~p~~~-s~~~a~~~---~~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 79 -DVDIIFSPLPQGA-AGPVEEQF---AKEGFPVISNSPDH 113 (359)
T ss_dssp -TCCEEEECCCTTT-HHHHHHHH---HHTTCEEEECSSTT
T ss_pred -CCCEEEECCChHH-HHHHHHHH---HHCCCEEEEcCCCc
Confidence 3999999999874 44444443 45799999999864
No 396
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.64 E-value=0.011 Score=58.75 Aligned_cols=92 Identities=12% Similarity=0.185 Sum_probs=55.4
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCC-CcEEEE-eCCh--HHHHHHHH---------hhhhcCCCCcccc-CCHHHHHhhc
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKG-FPISVY-NRTT--SKVDETVE---------RAKKEGDLPLFGF-RDPESFVNSI 71 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G-~~V~v~-dr~~--~~~~~l~~---------~~~~~~~~~~~~~-~s~~e~~~~l 71 (474)
++|||||| .|..|..|.+.|.++- .++... .++. .++..... ... ..... .+.+++ +
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~-----~~~v~~~~~~~~-~-- 78 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIA-----DMEIKPTDPKLM-D-- 78 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHH-----TCBCEECCGGGC-T--
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccc-----cceEEeCCHHHh-c--
Confidence 46899999 7999999999887653 355533 3332 12222100 000 01111 133332 3
Q ss_pred CCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 72 QKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 72 ~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
.+|+||+|+|.+. ..+....+ +..|..|||.|+-.
T Consensus 79 -~vDvvf~a~p~~~-s~~~a~~~---~~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 79 -DVDIIFSPLPQGA-AGPVEEQF---AKEGFPVISNSPDH 113 (359)
T ss_dssp -TCCEEEECCCTTT-HHHHHHHH---HHTTCEEEECSSTT
T ss_pred -CCCEEEECCChHH-HHHHHHHH---HHCCCEEEEcCCCc
Confidence 3999999999874 44444443 45799999999864
No 397
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.61 E-value=0.025 Score=57.34 Aligned_cols=114 Identities=14% Similarity=0.150 Sum_probs=67.7
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEE-EEeCCh---------------HHHHHHHHhhhhcCCC-CccccCCHHHHHhh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPIS-VYNRTT---------------SKVDETVERAKKEGDL-PLFGFRDPESFVNS 70 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~-v~dr~~---------------~~~~~l~~~~~~~~~~-~~~~~~s~~e~~~~ 70 (474)
++|.|.|.|++|+..|+.|.+.|.+|+ +.|.++ +.+.++.+.......+ +.... +.+++..
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i-~~~~~~~- 290 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERI-TDEEFWT- 290 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------------
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEe-Cccchhc-
Confidence 579999999999999999999999988 778883 5555555432100000 00111 2233322
Q ss_pred cCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 71 IQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 71 l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
-+||+++-|.....-.. +-++.+ ...+|+..+|.+ .+.+..+.+.++|+.|+.
T Consensus 291 -~~~DIliP~A~~n~i~~----~~A~~l-~ak~VvEgAN~P--~t~ea~~il~~~GI~~~P 343 (421)
T 2yfq_A 291 -KEYDIIVPAALENVITG----ERAKTI-NAKLVCEAANGP--TTPEGDKVLTERGINLTP 343 (421)
T ss_dssp -----CEEECSCSSCSCH----HHHTTC-CCSEEECCSSSC--SCHHHHHHHHHHTCEEEC
T ss_pred -CCccEEEEcCCcCcCCc----ccHHHc-CCeEEEeCCccc--cCHHHHHHHHHCCCEEEC
Confidence 13899998876653222 223334 578888888876 345666778888988774
No 398
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.60 E-value=0.027 Score=55.76 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=48.6
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHH--HHHHHhhhhcCCCCccc---cCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKV--DETVERAKKEGDLPLFG---FRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~--~~l~~~~~~~~~~~~~~---~~s~~e~~~~l~~~dvIil~ 80 (474)
.|+|.|.| .|.+|+.++..|++.|++|++.+|++++. +.+...... .+.. .++.+++.+.++.+|+||.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v----~~v~~D~l~d~~~l~~~~~~~d~Vi~~ 80 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV----TLFQGPLLNNVPLMDTLFEGAHLAFIN 80 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTE----EEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCc----EEEECCccCCHHHHHHHHhcCCEEEEc
Confidence 46799998 69999999999999999999999987654 333221000 0111 12444444434459999977
Q ss_pred cCC
Q 011931 81 VKA 83 (474)
Q Consensus 81 vp~ 83 (474)
...
T Consensus 81 a~~ 83 (352)
T 1xgk_A 81 TTS 83 (352)
T ss_dssp CCS
T ss_pred CCC
Confidence 653
No 399
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=95.60 E-value=0.042 Score=51.29 Aligned_cols=81 Identities=9% Similarity=0.117 Sum_probs=53.5
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
+|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... . ...+..=+.+...+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------------------~---~~~~~~Dv~~~~~v 62 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERP------------------N---LFYFHGDVADPLTL 62 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCT------------------T---EEEEECCTTSHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc------------------c---CCeEEeeCCCHHHH
Confidence 455665 6899999999999999999999999887766543211 0 11222223344556
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++++.....+=+++|++...
T Consensus 63 ~~~~~~~~~~~g~id~lv~nAg~ 85 (247)
T 3dii_A 63 KKFVEYAMEKLQRIDVLVNNACR 85 (247)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 66666666655555777776643
No 400
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.59 E-value=0.0074 Score=60.34 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=68.4
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCCh-------HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTT-------SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII 78 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~-------~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi 78 (474)
..||-|+|+|..|.++|+.+...|. +|+++|++. +.+..+.+.....-. ......+++|+++. +|++|
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~-~~~~~~~L~eav~~---ADV~I 263 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN-REFKSGTLEDALEG---ADIFI 263 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHS-CTTCCCSCSHHHHT---TCSEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccC-cccchhhHHHHhcc---CCEEE
Confidence 4689999999999999999999999 999999873 222222221111000 01124578999998 99887
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhH
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENT 115 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~ 115 (474)
=+..++... +++...+.++.||+++||-.|+.+
T Consensus 264 G~Sapgl~T----~EmVk~Ma~~pIIfalsNPt~E~~ 296 (398)
T 2a9f_A 264 GVSAPGVLK----AEWISKMAARPVIFAMANPIPEIY 296 (398)
T ss_dssp ECCSTTCCC----HHHHHTSCSSCEEEECCSSSCSSC
T ss_pred ecCCCCCCC----HHHHHhhCCCCEEEECCCCCccCC
Confidence 765543223 445556779999999999876544
No 401
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.59 E-value=0.0036 Score=61.85 Aligned_cols=91 Identities=11% Similarity=0.104 Sum_probs=54.9
Q ss_pred CcCcEEEEc-ccHhHHHHHHHHHHCC---CcEEEEe-C-ChHHHHHHHHhhhhcCCCCccccC-CHHHHHhhcCCCcEEE
Q 011931 6 QLTRIGLAG-LAVMGQNLALNIAEKG---FPISVYN-R-TTSKVDETVERAKKEGDLPLFGFR-DPESFVNSIQKPRVII 78 (474)
Q Consensus 6 ~~~~IgiIG-lG~mG~~lA~~L~~~G---~~V~v~d-r-~~~~~~~l~~~~~~~~~~~~~~~~-s~~e~~~~l~~~dvIi 78 (474)
+|+||+|+| .|.+|+.+.+.|.+++ ++|..++ + +..+.-.+. +. .+.... ++++ .+. +|+||
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~--~~-----~i~~~~~~~~~-~~~---vDvVf 70 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFN--GK-----TVRVQNVEEFD-WSQ---VHIAL 70 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEET--TE-----EEEEEEGGGCC-GGG---CSEEE
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeec--Cc-----eeEEecCChHH-hcC---CCEEE
Confidence 357999999 9999999999999874 3566554 2 221100000 00 112211 1222 234 99999
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+|+|.. ...+.... +++.|..+||.|+..
T Consensus 71 ~a~g~~-~s~~~a~~---~~~~G~~vId~s~~~ 99 (336)
T 2r00_A 71 FSAGGE-LSAKWAPI---AAEAGVVVIDNTSHF 99 (336)
T ss_dssp ECSCHH-HHHHHHHH---HHHTTCEEEECSSTT
T ss_pred ECCCch-HHHHHHHH---HHHcCCEEEEcCCcc
Confidence 999875 33333333 345788999998864
No 402
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.57 E-value=0.044 Score=52.85 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=72.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHhCCCc-----chhhhHHHHHHHHhhCCC-C
Q 011931 310 AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCI-----IRAVFLDRIKKAYDRNAD-L 383 (474)
Q Consensus 310 ~~~~~~~~~~~~~~i~~~~~~~~aqg~~ll~~~~~~~~~~l~~~~i~~iW~~gci-----i~s~ll~~~~~~~~~~~~-l 383 (474)
+.+.++.+|.++|.+.+..+..++|.+.+.++. ++|..+++++|+...+ -+|++.+ .+. +
T Consensus 173 ~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~------G~d~~~~~~~~~~~~~i~~~~~~s~~~~--------~~~~~ 238 (296)
T 3qha_A 173 EPGAGTRMKLARNMLTFTSYAAACEAMKLAEAA------GLDLQALGRVVRHTDALTGGPGAIMVRD--------NMKDL 238 (296)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHHHCCGGGGCCCS--------SCSCC
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHhhhcchHHHHhcCcccCHHhh--------chhhh
Confidence 357889999999999999999999999998753 4999999777764222 2343322 111 1
Q ss_pred CCCccChHHHH--HH-HhhhhhHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011931 384 ANLLVDPEFAK--EI-VDRQSAWRRVVCLAINSGISTPGMSSSLAYFD 428 (474)
Q Consensus 384 ~~ll~~~~~~~--~~-~~~~~~~~~~v~~a~~~gip~p~~~~al~y~~ 428 (474)
.. .++-|.- .+ .-...+++-++..|.+.|+|+|.+.++...|.
T Consensus 239 ~~--~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~ 284 (296)
T 3qha_A 239 EP--DNFLYQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGLA 284 (296)
T ss_dssp CT--TSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred hc--CCCCCchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 12 2333432 00 33456788899999999999999999997554
No 403
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=95.53 E-value=0.014 Score=58.52 Aligned_cols=95 Identities=16% Similarity=0.310 Sum_probs=55.0
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCC-CcEE-EEe-C-ChH-HHHHHHHh--------hhhcCCCCccccCCHHHHHhhcC
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKG-FPIS-VYN-R-TTS-KVDETVER--------AKKEGDLPLFGFRDPESFVNSIQ 72 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G-~~V~-v~d-r-~~~-~~~~l~~~--------~~~~~~~~~~~~~s~~e~~~~l~ 72 (474)
++|||||| .|..|..|.+.|.++- .++. ++. + +.. ++.+.... +..+ ..+... +.++..+.
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~--~~v~~~-~~~~~~~~-- 93 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQD--IVVQEC-KPEGNFLE-- 93 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHT--CBCEES-SSCTTGGG--
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhccccccccccccccc--ceEEeC-chhhhccc--
Confidence 45799999 7999999999888764 3564 442 2 221 22211100 0000 011111 22212344
Q ss_pred CCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 73 KPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 73 ~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+|+||+|+|.+ ...+....+ ++.|..|||.|+-.
T Consensus 94 -~Dvvf~alp~~-~s~~~~~~~---~~~G~~VIDlSa~f 127 (381)
T 3hsk_A 94 -CDVVFSGLDAD-VAGDIEKSF---VEAGLAVVSNAKNY 127 (381)
T ss_dssp -CSEEEECCCHH-HHHHHHHHH---HHTTCEEEECCSTT
T ss_pred -CCEEEECCChh-HHHHHHHHH---HhCCCEEEEcCCcc
Confidence 99999999976 444444444 45789999999865
No 404
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.53 E-value=0.025 Score=54.25 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=37.4
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER 49 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~ 49 (474)
+++-|+| .|.+|++++..|++.|++|++++|++++.+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~ 162 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS 162 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHH
Confidence 4688999 99999999999999999999999999887776643
No 405
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=95.52 E-value=0.069 Score=50.88 Aligned_cols=81 Identities=12% Similarity=0.101 Sum_probs=53.2
Q ss_pred EEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhHH
Q 011931 10 IGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVD 88 (474)
Q Consensus 10 IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v~ 88 (474)
+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+-.=+.+...++
T Consensus 32 vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~d~~~v~ 91 (277)
T 3gvc_A 32 AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG-----------------CG---AAACRVDVSDEQQII 91 (277)
T ss_dssp EEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-----------------SS---CEEEECCTTCHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-----------------Cc---ceEEEecCCCHHHHH
Confidence 44445 7899999999999999999999999988776654321 00 222222334444566
Q ss_pred HHHHHHHhcccCCCEEEecCCC
Q 011931 89 ETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 89 ~vl~~l~~~l~~g~iiId~st~ 110 (474)
.+++++.....+=+++|++...
T Consensus 92 ~~~~~~~~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 92 AMVDACVAAFGGVDKLVANAGV 113 (277)
T ss_dssp HHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 6666665555555677776554
No 406
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.52 E-value=0.038 Score=52.20 Aligned_cols=83 Identities=16% Similarity=0.175 Sum_probs=58.4
Q ss_pred cEEEE--cccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011931 9 RIGLA--GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (474)
Q Consensus 9 ~IgiI--GlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~ 84 (474)
|+.+| |.+-+|.++|+.|++.|.+|.+.||+++++++..++....+ .++..+ =+.+.
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-------------------~~~~~~~~Dv~~~ 70 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-------------------YDAHGVAFDVTDE 70 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------------------CCEEECCCCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------------CcEEEEEeeCCCH
Confidence 67787 68889999999999999999999999988877665432110 122221 13344
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.+++.+++++.....+=+++|+....
T Consensus 71 ~~v~~~~~~~~~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 71 LAIEAAFSKLDAEGIHVDILINNAGI 96 (255)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCC
Confidence 56777777777766666788876543
No 407
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.51 E-value=0.048 Score=51.41 Aligned_cols=83 Identities=17% Similarity=0.272 Sum_probs=56.8
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE--EecCCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII--MLVKAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi--l~vp~~~ 85 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.+ .=+.+..
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~~~~ 73 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT----------------G---RRALSVGTDITDDA 73 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEcCCCCHH
Confidence 455666 678999999999999999999999998877765533110 1 22332 2344445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++++.....+=+++|++...
T Consensus 74 ~v~~~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 74 QVAHLVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHHHHHHHHHHTSCCSEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCC
Confidence 6677777776666566788887643
No 408
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=95.51 E-value=0.048 Score=50.42 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=36.1
Q ss_pred CcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011931 6 QLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (474)
Q Consensus 6 ~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (474)
..++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR 49 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 335687887 4899999999999999999999999887766554
No 409
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=95.50 E-value=0.076 Score=49.80 Aligned_cols=85 Identities=19% Similarity=0.311 Sum_probs=56.8
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++-|.| .|-+|.++|+.|++.|++|.+.+|++++.+++.+.... .. .. ...+-.=+.+...+
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~------~~---~~~~~~Dv~~~~~v 70 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ--------FP------GQ---ILTVQMDVRNTDDI 70 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------ST------TC---EEEEECCTTCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------cC------Cc---EEEEEccCCCHHHH
Confidence 354555 68999999999999999999999999888776654311 00 01 22222334444566
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++++.....+=+++|++...
T Consensus 71 ~~~~~~~~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 71 QKMIEQIDEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 77777776665556788887653
No 410
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=95.50 E-value=0.045 Score=50.62 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=36.7
Q ss_pred CCcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011931 5 KQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (474)
Q Consensus 5 ~~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (474)
...++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK 49 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3345688887 5999999999999999999999999887766554
No 411
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.50 E-value=0.011 Score=60.84 Aligned_cols=106 Identities=13% Similarity=0.152 Sum_probs=72.8
Q ss_pred CcEEEEccc----HhHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 8 TRIGLAGLA----VMGQNLALNIAEKG-FPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 8 ~~IgiIGlG----~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
.+|+|||++ .+|..+.++|.+.| +.|..+|+..+.+ . ++.++.|++|+.+. +|++++++|
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i-----~-------G~~~y~sl~~lp~~---~Dlavi~vp 73 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV-----Q-------GVKAYKSVKDIPDE---IDLAIIVVP 73 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE-----T-------TEECBSSTTSCSSC---CSEEEECSC
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeE-----C-------CEeccCCHHHcCCC---CCEEEEecC
Confidence 469999998 89999999999885 6676666653211 1 36778888888765 999999999
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCCCch--h-----HHHHHHHHHHcCCeEEe
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNEWYE--N-----TERREKAMAELGLLYLG 131 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~~~~--~-----~~~~~~~l~~~g~~~v~ 131 (474)
+. .+.++++++... ... .++-.+.+.++ + .+++.+.++++|+++++
T Consensus 74 ~~-~~~~~v~e~~~~-Gi~-~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viG 126 (457)
T 2csu_A 74 KR-FVKDTLIQCGEK-GVK-GVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIG 126 (457)
T ss_dssp HH-HHHHHHHHHHHH-TCC-EEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEEC
T ss_pred HH-HHHHHHHHHHHc-CCC-EEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEc
Confidence 85 677777776653 222 34444444332 2 44555666777888874
No 412
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=95.50 E-value=0.048 Score=51.31 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=56.0
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE--EecCC
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII--MLVKA 83 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi--l~vp~ 83 (474)
.+++-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+..... . .++.+ .=+.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~ 67 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK----------------G---VEARSYVCDVTS 67 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------T---SCEEEEECCTTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEecCCC
Confidence 34566666 789999999999999999999999988776655432100 0 22222 22334
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
...++.+++.+.....+=+++|++...
T Consensus 68 ~~~~~~~~~~~~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 68 EEAVIGTVDSVVRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 445666666666555555788877654
No 413
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=95.49 E-value=0.039 Score=51.67 Aligned_cols=48 Identities=17% Similarity=0.282 Sum_probs=36.7
Q ss_pred CCCCCCcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeC-ChHHHHHHHH
Q 011931 1 MVEGKQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNR-TTSKVDETVE 48 (474)
Q Consensus 1 m~~~~~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~l~~ 48 (474)
|.+....++|-|.| .|.+|..+++.|++.|++|++.+| ++++.+++.+
T Consensus 1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (261)
T 1gee_A 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLE 50 (261)
T ss_dssp CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 44333444566665 899999999999999999999999 7776655543
No 414
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.48 E-value=0.013 Score=57.05 Aligned_cols=72 Identities=13% Similarity=0.182 Sum_probs=46.5
Q ss_pred CcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecC
Q 011931 6 QLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 6 ~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--~~s~~e~~~~l~~~dvIil~vp 82 (474)
++|+|.|.| .|.+|+.++..|++.|++|++.+|++++.+.+..... .+.. ..+.+++.+.++++|+||.+..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~-----~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEP-----ECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCC-----EEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCe-----EEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 346899998 6999999999999999999999998765443321110 0110 1233333333445888887764
No 415
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=95.47 E-value=0.098 Score=48.87 Aligned_cols=86 Identities=13% Similarity=0.221 Sum_probs=57.1
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec--CCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV--KAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~v--p~~~ 85 (474)
.+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... ... ..+..+..-+ .+..
T Consensus 14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~--~~~~~~~~D~~~~~~~ 77 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE--------------ETG--RQPQWFILDLLTCTSE 77 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------HHS--CCCEEEECCTTTCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------------hcC--CCceEEEEecccCCHH
Confidence 355555 68999999999999999999999999887766543211 000 0133333333 3445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++.+.....+=+++|++...
T Consensus 78 ~~~~~~~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 78 NCQQLAQRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHHHHHHHHCSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcc
Confidence 5667777776666556788887654
No 416
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.46 E-value=0.038 Score=56.53 Aligned_cols=114 Identities=11% Similarity=0.057 Sum_probs=66.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHH--HHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec--C
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKV--DETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV--K 82 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~--~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~v--p 82 (474)
.++|.|||+|..|.+.|+.|++.|++|+++|...... ..+. .+. ++..-....+.++. +|.||++. |
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~-----~~~~g~~~~~~~~~---~d~vV~s~gi~ 75 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAV-----ERHTGSLNDEWLMA---ADLIVASPGIA 75 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTS-----CEEESSCCHHHHHT---CSEEEECTTSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCC-----EEEECCCcHHHhcc---CCEEEeCCCCC
Confidence 3579999999999999999999999999999764321 1222 221 12211212445545 89988873 3
Q ss_pred CC-hhHHHHH-------H--H-HHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeE
Q 011931 83 AG-APVDETI-------K--T-LSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLY 129 (474)
Q Consensus 83 ~~-~~v~~vl-------~--~-l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~ 129 (474)
+. ..+.... . + +...++...|-|-.|+++-.++.-+...|...|...
T Consensus 76 ~~~p~~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g~~~ 133 (439)
T 2x5o_A 76 LAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNV 133 (439)
T ss_dssp TTCHHHHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCCHHHHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCE
Confidence 22 2222211 0 1 112233334456666776555555667777776543
No 417
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.45 E-value=0.11 Score=48.98 Aligned_cols=85 Identities=9% Similarity=0.110 Sum_probs=56.2
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~~ 85 (474)
.+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... .... .++.++ =+.+..
T Consensus 10 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--------------~~~~---~~~~~~~~Dv~~~~ 72 (265)
T 3lf2_A 10 VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQ--------------RFPG---ARLFASVCDVLDAL 72 (265)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------HSTT---CCEEEEECCTTCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--------------hcCC---ceEEEEeCCCCCHH
Confidence 355555 78999999999999999999999999887766543211 0000 123322 234445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++.+.....+=+++|++...
T Consensus 73 ~v~~~~~~~~~~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 73 QVRAFAEACERTLGCASILVNNAGQ 97 (265)
T ss_dssp HHHHHHHHHHHHHCSCSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 6667777766655556788887654
No 418
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.45 E-value=0.037 Score=54.54 Aligned_cols=95 Identities=12% Similarity=0.006 Sum_probs=61.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhc---CCCcEEEEecC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSI---QKPRVIIMLVK 82 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~~l---~~~dvIil~vp 82 (474)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.+... -+.. ..+..+.+..+ ...|+||-++.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~---~~~~~~~~~~~~v~~~~~g~g~D~vid~~g 245 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY---VINPFEEDVVKEVMDITDGNGVDVFLEFSG 245 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE---EECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE---EECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 469999999999999999988999 9999999999887776554311 0001 12233333221 13788888887
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCC
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st 109 (474)
.... +....+.+.++..++..+.
T Consensus 246 ~~~~----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 246 APKA----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp CHHH----HHHHHHHEEEEEEEEECCC
T ss_pred CHHH----HHHHHHHHhcCCEEEEEcc
Confidence 5333 3334445555556666654
No 419
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=95.43 E-value=0.061 Score=50.16 Aligned_cols=84 Identities=14% Similarity=0.205 Sum_probs=54.6
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~ 84 (474)
+++-|.| .|.+|..+|+.|++.|++|.+.+|++++.+++.+.... .. .++.++ =+.+.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----------------~~---~~~~~~~~Dv~~~ 68 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA----------------AG---AKVHVLELDVADR 68 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------------TT---CCEEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh----------------cC---CcEEEEECCCCCH
Confidence 3466665 78999999999999999999999998877665543210 01 222222 23344
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
..++.+++++.....+=+++|++...
T Consensus 69 ~~~~~~~~~~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 69 QGVDAAVASTVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 45666666665555455777776543
No 420
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=95.41 E-value=0.055 Score=53.95 Aligned_cols=100 Identities=14% Similarity=0.133 Sum_probs=58.0
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCC--c---EEEEeCChH----HHHHHHHhhhhcC-CC--CccccCCHHHHHhhcCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGF--P---ISVYNRTTS----KVDETVERAKKEG-DL--PLFGFRDPESFVNSIQKP 74 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~--~---V~v~dr~~~----~~~~l~~~~~~~~-~~--~~~~~~s~~e~~~~l~~~ 74 (474)
+||+||| +|.+|.+++..|+..+. + |.++|.+.+ +++-..-...+.. .+ ++...++..+..+. +
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~d---a 109 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFED---V 109 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTT---C
T ss_pred CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCC---C
Confidence 5899999 79999999999998875 2 777655433 2332222111100 00 13344455555555 9
Q ss_pred cEEEEecCCC----hh-----------HHHHHHHHHhcccCCCEEEecCCC
Q 011931 75 RVIIMLVKAG----AP-----------VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 75 dvIil~vp~~----~~-----------v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
|+||++-..+ .. ++.+...+.....++.+|+..||-
T Consensus 110 DvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP 160 (375)
T 7mdh_A 110 DWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP 160 (375)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 9999975322 11 122223344444577888888873
No 421
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=95.38 E-value=0.029 Score=52.30 Aligned_cols=93 Identities=15% Similarity=0.190 Sum_probs=56.8
Q ss_pred CCCCCCcCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCC-hHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE
Q 011931 1 MVEGKQLTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRT-TSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII 78 (474)
Q Consensus 1 m~~~~~~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~-~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi 78 (474)
|....+.++|-|.| .|.+|..+++.|++.|++|.+.+|+ +++.+.+.+.... . -.. ..++.
T Consensus 1 m~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~------~~~---~~~~~ 63 (258)
T 3afn_B 1 MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA--------D------GGD---AAFFA 63 (258)
T ss_dssp -CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH--------T------TCE---EEEEE
T ss_pred CCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh--------c------CCc---eEEEE
Confidence 43333334566666 6999999999999999999999998 7766655432210 0 001 12222
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.=+.+...++.+++++.....+=++||++...
T Consensus 64 ~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 64 ADLATSEACQQLVDEFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 22333445666666665555455788887654
No 422
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.37 E-value=0.075 Score=49.92 Aligned_cols=85 Identities=18% Similarity=0.270 Sum_probs=54.3
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~ 84 (474)
++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+... +.. . .++.++ =+.+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~--------------~~~-~---~~~~~~~~D~~~~ 69 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK--------------EKF-G---VRVLEVAVDVATP 69 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--------------HHH-C---CCEEEEECCTTSH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH--------------Hhc-C---CceEEEEcCCCCH
Confidence 4566666 6899999999999999999999999887765543221 000 1 222222 23333
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
..++.+++++.....+=+++|++...
T Consensus 70 ~~~~~~~~~~~~~~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 70 EGVDAVVESVRSSFGGADILVNNAGT 95 (263)
T ss_dssp HHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 45666666665555455777776653
No 423
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.36 E-value=0.063 Score=52.78 Aligned_cols=125 Identities=14% Similarity=0.025 Sum_probs=65.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh-cCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK-EGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~-~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
..+|.|||+|..|+.+|.+|+..|. +++++|.+.-....+..+.-. ....+..-+....+.+..+. +++-+...+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~in-P~v~v~~~~~~ 112 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF-PLMDATGVKLS 112 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHC-TTCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhC-CCCEEEEEecc
Confidence 3589999999999999999999997 788999875221111111000 00000001112222222221 44444444311
Q ss_pred ---------hh--HHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 85 ---------AP--VDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 85 ---------~~--v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
.. ...-.+.+...+..-++|+|++-... +-..+...+...++.++.+.
T Consensus 113 i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~-tR~lin~~c~~~~~plI~aa 171 (340)
T 3rui_A 113 IPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE-SRWLPSLLSNIENKTVINAA 171 (340)
T ss_dssp CCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG-GGHHHHHHHHHTTCEEEEEE
T ss_pred ccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH-HHHHHHHHHHHcCCcEEEee
Confidence 00 01111223344556789999877653 33344455667788888753
No 424
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=95.35 E-value=0.11 Score=48.18 Aligned_cols=86 Identities=16% Similarity=0.233 Sum_probs=56.6
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEec--CCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLV--KAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~v--p~~~ 85 (474)
++-|.| .|.+|..+|+.|++.|++|.+.+|++++.+++.+..... .. ....++.+-+ .+..
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------------~~-~~~~~~~~d~d~~~~~ 79 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA---------------GQ-PQPLIIALNLENATAQ 79 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------------TS-CCCEEEECCTTTCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc---------------CC-CCceEEEeccccCCHH
Confidence 355556 689999999999999999999999998877766543210 00 0023333333 3344
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++.+.....+=+++|++...
T Consensus 80 ~~~~~~~~~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 80 QYRELAARVEHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcc
Confidence 5666666666655556788887654
No 425
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=95.34 E-value=0.066 Score=51.61 Aligned_cols=85 Identities=9% Similarity=0.114 Sum_probs=56.8
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
+|-|.| .|.+|..+|+.|++.|++|.+.+|++++.+++.+..... . .+..++.+=+.+...+
T Consensus 33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~-~~~~~~~~Dv~d~~~v 95 (301)
T 3tjr_A 33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ----------------G-FDAHGVVCDVRHLDEM 95 (301)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T-CCEEEEECCTTCHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------C-CceEEEEccCCCHHHH
Confidence 466666 688999999999999999999999998877765533210 1 0022233333444556
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++.+.....+=+++|++...
T Consensus 96 ~~~~~~~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 96 VRLADEAFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCCc
Confidence 66666666655555778877654
No 426
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.34 E-value=0.16 Score=45.85 Aligned_cols=118 Identities=10% Similarity=0.069 Sum_probs=74.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCC-Cccc-cCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDL-PLFG-FRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~-~~~~-~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.+|--||+|. | .++..+++.+.+|+++|.+++.++.+.+.....+.. ++.. ..+..+....+...|+|++....
T Consensus 57 ~~vLDlGcG~-G-~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-- 132 (204)
T 3njr_A 57 ELLWDIGGGS-G-SVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-- 132 (204)
T ss_dssp CEEEEETCTT-C-HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC--
T ss_pred CEEEEecCCC-C-HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc--
Confidence 4788999987 4 355556666899999999999887766543221100 1222 23444433334458999976533
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEe
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLG 131 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~ 131 (474)
..+ +++.+...|++|..++-.+ ..+....+..+.+++.|.....
T Consensus 133 ~~~-~l~~~~~~LkpgG~lv~~~-~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 133 SQA-LYDRLWEWLAPGTRIVANA-VTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp CHH-HHHHHHHHSCTTCEEEEEE-CSHHHHHHHHHHHHHHCSEEEE
T ss_pred cHH-HHHHHHHhcCCCcEEEEEe-cCcccHHHHHHHHHhCCCcEEE
Confidence 345 7888888888877655432 2345666677777777765544
No 427
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.34 E-value=0.031 Score=51.65 Aligned_cols=71 Identities=17% Similarity=0.206 Sum_probs=47.8
Q ss_pred CcCcEEEEc-ccHhHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEe
Q 011931 6 QLTRIGLAG-LAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 6 ~~~~IgiIG-lG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--~~s~~e~~~~l~~~dvIil~ 80 (474)
++++|.|.| .|.+|+.+++.|++. |++|++.+|++++.+.+.. . ..+.. ..+.+++.+.++.+|+||.+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~-~-----~~~~~~D~~d~~~~~~~~~~~d~vi~~ 76 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-E-----ADVFIGDITDADSINPAFQGIDALVIL 76 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-C-----TTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCC-C-----eeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 456899998 799999999999999 8999999999877654410 0 00111 12333333333448888887
Q ss_pred cC
Q 011931 81 VK 82 (474)
Q Consensus 81 vp 82 (474)
..
T Consensus 77 a~ 78 (253)
T 1xq6_A 77 TS 78 (253)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 428
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.33 E-value=0.069 Score=50.19 Aligned_cols=87 Identities=11% Similarity=0.137 Sum_probs=58.3
Q ss_pred CcEEEEcc-c-HhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 8 TRIGLAGL-A-VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGl-G-~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
+++-|.|. | .+|..+|+.|++.|++|.+.+|+.++.++..+..... .. .+..++..=+.+..
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------------~~-~~~~~~~~Dl~~~~ 86 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL---------------GL-GRVEAVVCDVTSTE 86 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------------CS-SCEEEEECCTTCHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc---------------CC-CceEEEEeCCCCHH
Confidence 35777898 8 5999999999999999999999998877665533110 00 00222333334445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++++.....+=+++|++...
T Consensus 87 ~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 87 AVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCc
Confidence 6677777776665556788887654
No 429
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=95.33 E-value=0.055 Score=50.73 Aligned_cols=84 Identities=10% Similarity=0.043 Sum_probs=52.5
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
+.+-|.| .|-+|..+|+.|++.|++|.+.+|++++.++..+.. -.. ...+..=+.+...
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~---~~~~~~Dv~~~~~ 67 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----------------GAA---VRFRNADVTNEAD 67 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------------------CEEEECCTTCHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----------------CCc---eEEEEccCCCHHH
Confidence 3455566 689999999999999999999999987665543211 011 3333333445556
Q ss_pred HHHHHHHHHhcccCCCEEEecCCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
++.+++.+.....+=+++|++....
T Consensus 68 v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 68 ATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 7777777766665667888876543
No 430
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=95.32 E-value=0.087 Score=48.36 Aligned_cols=41 Identities=15% Similarity=0.303 Sum_probs=34.4
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (474)
++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+.+.+
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 47 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAA 47 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 3466665 8999999999999999999999999887766543
No 431
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.32 E-value=0.048 Score=51.93 Aligned_cols=84 Identities=12% Similarity=0.135 Sum_probs=55.9
Q ss_pred EEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhHH
Q 011931 10 IGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVD 88 (474)
Q Consensus 10 IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v~ 88 (474)
+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... -.. ...+..=+.+...++
T Consensus 27 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--------------~~~---~~~~~~Dv~d~~~v~ 89 (279)
T 3sju_A 27 AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--------------GHD---VDGSSCDVTSTDEVH 89 (279)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--------------TCC---EEEEECCTTCHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCc---EEEEECCCCCHHHHH
Confidence 55555 789999999999999999999999998877765533110 000 222222334445666
Q ss_pred HHHHHHHhcccCCCEEEecCCC
Q 011931 89 ETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 89 ~vl~~l~~~l~~g~iiId~st~ 110 (474)
.+++++.....+=+++|++...
T Consensus 90 ~~~~~~~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 90 AAVAAAVERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHHHHHHHCSCCEEEECCCC
T ss_pred HHHHHHHHHcCCCcEEEECCCC
Confidence 6777766655555788877654
No 432
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.32 E-value=0.096 Score=45.54 Aligned_cols=120 Identities=10% Similarity=0.060 Sum_probs=72.7
Q ss_pred CcEEEEcccHhHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCC-CccccCCHHHHHhhc-CCCcEEEEecCC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDL-PLFGFRDPESFVNSI-QKPRVIIMLVKA 83 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~-~~~~~~s~~e~~~~l-~~~dvIil~vp~ 83 (474)
.+|.-||+|. | .++..+++. +.+|+++|.+++.++...+.....+.. ++....+..+..... ...|+|++.-+.
T Consensus 27 ~~vldiG~G~-G-~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 27 ETLWDIGGGS-G-SIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp EEEEEESTTT-T-HHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CeEEEeCCCC-C-HHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcc
Confidence 4788999997 4 455555555 679999999998887766543221100 122223332222222 458999987665
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEec
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGM 132 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~ 132 (474)
.. ..+++.+...|++|..++-.. ..+.........+...+..+...
T Consensus 105 ~~--~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 105 TA--PGVFAAAWKRLPVGGRLVANA-VTVESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp TC--TTHHHHHHHTCCTTCEEEEEE-CSHHHHHHHHHHHHHHCCEEEEE
T ss_pred cH--HHHHHHHHHhcCCCCEEEEEe-eccccHHHHHHHHHHcCCeeEEE
Confidence 43 567788888888887666433 23345555666677777665543
No 433
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=95.32 E-value=0.012 Score=58.89 Aligned_cols=83 Identities=10% Similarity=0.114 Sum_probs=60.7
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCC---cEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecC
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGF---PISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp 82 (474)
..||-|||. |+.|.+-+..+...|. .|+++|+++.+. +. + .+++ .. +|+||-|+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~-----~------~~~i-~~---aDivIn~vl 272 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR------GG-----P------FDEI-PQ---ADIFINCIY 272 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT------CS-----C------CTHH-HH---SSEEEECCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc------CC-----c------hhhH-hh---CCEEEECcC
Confidence 458999999 9999999999999998 999999886221 21 1 1333 44 999999998
Q ss_pred CChhHHHHH-HHHHhcc-cCCCEEEecCCC
Q 011931 83 AGAPVDETI-KTLSAYM-EKGDCIIDGGNE 110 (474)
Q Consensus 83 ~~~~v~~vl-~~l~~~l-~~g~iiId~st~ 110 (474)
-+.....++ ++.+..+ ++|.+|||.+.-
T Consensus 273 ig~~aP~Lvt~e~v~~m~k~gsVIVDVA~D 302 (394)
T 2qrj_A 273 LSKPIAPFTNMEKLNNPNRRLRTVVDVSAD 302 (394)
T ss_dssp CCSSCCCSCCHHHHCCTTCCCCEEEETTCC
T ss_pred cCCCCCcccCHHHHhcCcCCCeEEEEEecC
Confidence 643222222 4555667 899999999754
No 434
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=95.30 E-value=0.12 Score=47.83 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=33.8
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (474)
+|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+
T Consensus 13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (254)
T 2wsb_A 13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ 53 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 466665 7999999999999999999999999887665543
No 435
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.29 E-value=0.042 Score=51.97 Aligned_cols=69 Identities=12% Similarity=0.253 Sum_probs=47.3
Q ss_pred cEEEEcc-cHhHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecC
Q 011931 9 RIGLAGL-AVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 9 ~IgiIGl-G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--~~s~~e~~~~l~~~dvIil~vp 82 (474)
+|.|.|. |.+|+.++..|++. |++|++.+|++++.+.+...+.. +.. ..+.+++.+.++.+|+||.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGIT-----VRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCE-----EEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCe-----EEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4788985 99999999999998 99999999998776555432210 111 1234444444555898887764
No 436
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=95.26 E-value=0.087 Score=49.85 Aligned_cols=83 Identities=8% Similarity=0.051 Sum_probs=55.7
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+...+
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~~~~~v 72 (271)
T 3tzq_B 13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG-----------------RG---AVHHVVDLTNEVSV 72 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC-----------------TT---CEEEECCTTCHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-----------------CC---eEEEECCCCCHHHH
Confidence 455566 6899999999999999999999999887766554321 01 22333333444566
Q ss_pred HHHHHHHHhcccCCCEEEecCCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+.+++.+.....+=+++|++....
T Consensus 73 ~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 73 RALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 666666666555567787766543
No 437
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.25 E-value=0.049 Score=53.67 Aligned_cols=42 Identities=14% Similarity=0.277 Sum_probs=31.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC---CcEEE-EeC-ChHHHHHHHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG---FPISV-YNR-TTSKVDETVE 48 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G---~~V~v-~dr-~~~~~~~l~~ 48 (474)
++||||+|.|.+|+.+.+.|.+++ ++|.. .|+ +++....+.+
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~ 48 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLE 48 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhc
Confidence 358999999999999999998873 56654 455 5555555543
No 438
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=95.25 E-value=0.054 Score=51.53 Aligned_cols=87 Identities=11% Similarity=0.197 Sum_probs=57.7
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~ 84 (474)
+++-|.| .|-+|.++|+.|++.|++|.+.+|++++.++..+.....+ . .. .++.++ =+.+.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~-------~~---~~~~~~~~Dv~~~ 75 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG------A-------NG---GAIRYEPTDITNE 75 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC------C-------SS---CEEEEEECCTTSH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC------C-------CC---ceEEEEeCCCCCH
Confidence 3455665 7899999999999999999999999988777665432100 0 00 123222 33444
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
..++.+++++.....+=+++|++...
T Consensus 76 ~~v~~~~~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 76 DETARAVDAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 56667777776665566788887664
No 439
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.21 E-value=0.035 Score=53.13 Aligned_cols=71 Identities=15% Similarity=0.182 Sum_probs=47.5
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCC-CcEEEEeCChHHHH--HHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKG-FPISVYNRTTSKVD--ETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G-~~V~v~dr~~~~~~--~l~~~~~~~~~~~~~~--~~s~~e~~~~l~~~dvIil~ 80 (474)
+++|.|.|. |.+|+.++..|++.| ++|.+.+|++++.. .+...+. .+.. ..+.+++.+.++.+|+||.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~-----~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA-----EVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTC-----EEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCC-----EEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 467999996 999999999999998 99999999976542 2222211 0111 12344443334458988887
Q ss_pred cC
Q 011931 81 VK 82 (474)
Q Consensus 81 vp 82 (474)
..
T Consensus 80 a~ 81 (299)
T 2wm3_A 80 TN 81 (299)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 440
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.21 E-value=0.051 Score=54.22 Aligned_cols=42 Identities=14% Similarity=0.283 Sum_probs=30.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC---CcEEEE-eC-ChHHHHHHHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG---FPISVY-NR-TTSKVDETVE 48 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G---~~V~v~-dr-~~~~~~~l~~ 48 (474)
++||||+|+|.+|+.+.+.|.+++ ++|... |+ +++....+.+
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~ 48 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLE 48 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHH
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhc
Confidence 368999999999999999998863 566544 54 5555555543
No 441
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=95.20 E-value=0.069 Score=49.99 Aligned_cols=83 Identities=12% Similarity=0.213 Sum_probs=53.6
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE--EecCCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII--MLVKAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi--l~vp~~~ 85 (474)
++-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+..... . .++.+ .=+.+..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~~ 64 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA----------------G---GHAVAVKVDVSDRD 64 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CCEEEEECCTTSHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEEecCCCHH
Confidence 455665 789999999999999999999999988776654432100 0 12222 2233344
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++++.....+=+++|++...
T Consensus 65 ~v~~~~~~~~~~~g~id~lv~nAg~ 89 (256)
T 1geg_A 65 QVFAAVEQARKTLGGFDVIVNNAGV 89 (256)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCC
Confidence 5666666665555455777776643
No 442
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=95.19 E-value=0.081 Score=48.78 Aligned_cols=94 Identities=16% Similarity=0.230 Sum_probs=59.1
Q ss_pred cCcEEEEcc-cHhHHHHHHHHHHCCCcEE-EEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE-EecCC
Q 011931 7 LTRIGLAGL-AVMGQNLALNIAEKGFPIS-VYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII-MLVKA 83 (474)
Q Consensus 7 ~~~IgiIGl-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi-l~vp~ 83 (474)
.||.+|+|+ |.||+.++......|+++. .+|++.+ . ++ +. +|++| .+.|.
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~~----------~----------~l----~~---~DVvIDFT~P~ 64 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV----------E----------EL----DS---PDVVIDFSSPE 64 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE----------E----------EC----SC---CSEEEECSCGG
T ss_pred cceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCCc----------c----------cc----cC---CCEEEECCCHH
Confidence 478999997 9999999887777788865 6676531 0 01 13 89888 55554
Q ss_pred ChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 84 GAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 84 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
.+...++.. +..|.-+|..+|+......+..+.+.++ +.++-+|
T Consensus 65 --a~~~~~~~~---~~~g~~~ViGTTG~~~~~~~~l~~~a~~-~~vv~ap 108 (228)
T 1vm6_A 65 --ALPKTVDLC---KKYRAGLVLGTTALKEEHLQMLRELSKE-VPVVQAY 108 (228)
T ss_dssp --GHHHHHHHH---HHHTCEEEECCCSCCHHHHHHHHHHTTT-SEEEECS
T ss_pred --HHHHHHHHH---HHcCCCEEEeCCCCCHHHHHHHHHHHhh-CCEEEec
Confidence 455554433 3457778888888755443344444333 5555454
No 443
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=95.18 E-value=0.056 Score=49.70 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=34.8
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE 48 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 48 (474)
++|-|.| .|.+|..+|+.|++.|++|.+.+|++++.+++.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN 43 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3566776 6899999999999999999999999988877654
No 444
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=95.18 E-value=0.1 Score=49.39 Aligned_cols=81 Identities=11% Similarity=0.189 Sum_probs=53.4
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
+|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+... . ...+..=+.+...+
T Consensus 11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------------------~---~~~~~~Dv~d~~~v 69 (270)
T 1yde_A 11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP------------------G---AVFILCDVTQEDDV 69 (270)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT------------------T---EEEEECCTTSHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------------------C---CeEEEcCCCCHHHH
Confidence 466665 7899999999999999999999999887765543210 0 11222223334456
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++++.....+=+++|++...
T Consensus 70 ~~~~~~~~~~~g~iD~lv~nAg~ 92 (270)
T 1yde_A 70 KTLVSETIRRFGRLDCVVNNAGH 92 (270)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 66666665555555777776653
No 445
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.18 E-value=0.12 Score=51.10 Aligned_cols=93 Identities=18% Similarity=0.205 Sum_probs=58.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccccCC---HHHHHhhc-----CCCcEEE
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFGFRD---PESFVNSI-----QKPRVII 78 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s---~~e~~~~l-----~~~dvIi 78 (474)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.+.. .....+ ..++.+.+ ...|+||
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-----~vi~~~~~~~~~~~~~i~~~~~~g~D~vi 247 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD-----LVLQISKESPQEIARKVEGQLGCKPEVTI 247 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-----EEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC-----EEEcCcccccchHHHHHHHHhCCCCCEEE
Confidence 479999999999999888888898 899999999988776654431 111111 12222211 2367887
Q ss_pred EecCCChhHHHHHHHHHhcccCCCEEEecCC
Q 011931 79 MLVKAGAPVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 79 l~vp~~~~v~~vl~~l~~~l~~g~iiId~st 109 (474)
-++..... +......+.++..++..+.
T Consensus 248 d~~g~~~~----~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 248 ECTGAEAS----IQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp ECSCCHHH----HHHHHHHSCTTCEEEECSC
T ss_pred ECCCChHH----HHHHHHHhcCCCEEEEEec
Confidence 77764322 2333445556555655543
No 446
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=95.16 E-value=0.061 Score=50.60 Aligned_cols=85 Identities=9% Similarity=0.087 Sum_probs=56.0
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
+|-|.| .|.+|..+|+.|++.|++|.+.+|++++.+++.+..... -.. ..++.+=+.+...+
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~---~~~~~~D~~~~~~v 93 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--------------GGE---AESHACDLSHSDAI 93 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--------------TCE---EEEEECCTTCHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--------------CCc---eeEEEecCCCHHHH
Confidence 455566 799999999999999999999999998877665533110 001 22222233444456
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++++.....+=++||++...
T Consensus 94 ~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 94 AAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCc
Confidence 66666666555556777777654
No 447
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=95.15 E-value=0.11 Score=49.40 Aligned_cols=82 Identities=15% Similarity=0.261 Sum_probs=55.9
Q ss_pred cEEEE-c-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 9 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 9 ~IgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
|+.+| | .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+-.=+.+...
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~d~~~ 88 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-----------------DD---ALCVPTDVTDPDS 88 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT-----------------SC---CEEEECCTTSHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-----------------CC---eEEEEecCCCHHH
Confidence 55555 5 7899999999999999999999999888776654321 11 2333333444456
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=+++|++...
T Consensus 89 v~~~~~~~~~~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 89 VRALFTATVEKFGRVDVLFNNAGT 112 (272)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 666676666655556777776654
No 448
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=95.15 E-value=0.075 Score=49.68 Aligned_cols=89 Identities=15% Similarity=0.274 Sum_probs=56.2
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
+.+-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... .....+..++-.=+.+...
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~~~ 73 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRS--------------NKHVQEPIVLPLDITDCTK 73 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH--------------CTTSCCCEEEECCTTCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--------------ccccCcceEEeccCCCHHH
Confidence 3455566 689999999999999999999999998887766543110 0000002233333444455
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=+++|++...
T Consensus 74 v~~~~~~~~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 74 ADTEIKDIHQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHHHHHHHHHCCEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCc
Confidence 666666666555455677776654
No 449
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=95.13 E-value=0.047 Score=51.19 Aligned_cols=83 Identities=16% Similarity=0.197 Sum_probs=54.3
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~ 84 (474)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+.
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~~~ 68 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA----------------G---GRIVARSLDARNE 68 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT----------------T---CEEEEEECCTTCH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CeEEEEECcCCCH
Confidence 4466666 778999999999999999999999998877766543210 0 222222 23444
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
..++.+++.+... .+=+++|++...
T Consensus 69 ~~v~~~~~~~~~~-g~id~lv~nAg~ 93 (252)
T 3h7a_A 69 DEVTAFLNAADAH-APLEVTIFNVGA 93 (252)
T ss_dssp HHHHHHHHHHHHH-SCEEEEEECCCC
T ss_pred HHHHHHHHHHHhh-CCceEEEECCCc
Confidence 4566666666554 344677776553
No 450
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=95.13 E-value=0.077 Score=49.41 Aligned_cols=83 Identities=13% Similarity=0.099 Sum_probs=56.9
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~~ 85 (474)
++-|.| .|.+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.++ =+.+..
T Consensus 11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~D~~~~~ 71 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD----------------G---GTAISVAVDVSDPE 71 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------T---CEEEEEECCTTSHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----------------C---CcEEEEEccCCCHH
Confidence 456666 689999999999999999999999998877766543210 1 222222 233445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++.+.....+=+++|++...
T Consensus 72 ~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 72 SAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 5666777766666566788887654
No 451
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.11 E-value=0.053 Score=53.44 Aligned_cols=42 Identities=12% Similarity=0.333 Sum_probs=31.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHH---C-CCcEEEE-eC-ChHHHHHHHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAE---K-GFPISVY-NR-TTSKVDETVE 48 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~---~-G~~V~v~-dr-~~~~~~~l~~ 48 (474)
++||||+|.|.+|+.+.+.|.+ + .++|... |+ +++....+.+
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~ 49 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLK 49 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHH
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhc
Confidence 3589999999999999999987 4 5676644 44 4555555553
No 452
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.10 E-value=0.082 Score=54.42 Aligned_cols=99 Identities=15% Similarity=0.248 Sum_probs=66.1
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhh--cCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNS--IQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~--l~~~dvIil~vp~~ 84 (474)
..+|-|+|.|.+|..+|+.|. .+++|.+.++++++++.+.+..... .-+....+..++..+ ++.+|+++.++.++
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~~~--~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~D 311 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELENT--IVFCGDAADQELLTEENIDQVDVFIALTNED 311 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCTTS--EEEESCTTCHHHHHHTTGGGCSEEEECCSCH
T ss_pred ccEEEEEcchHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCCCc--eEEeccccchhhHhhcCchhhcEEEEcccCc
Confidence 457999999999999999984 5699999999999999998865321 001222333344332 45599888887765
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st 109 (474)
...-+..-++..+....+|.-..+
T Consensus 312 -e~Ni~~~llAk~~gv~kvIa~vn~ 335 (461)
T 4g65_A 312 -ETNIMSAMLAKRMGAKKVMVLIQR 335 (461)
T ss_dssp -HHHHHHHHHHHHTTCSEEEEECSC
T ss_pred -HHHHHHHHHHHHcCCccccccccc
Confidence 444333445555655566655444
No 453
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.10 E-value=0.037 Score=49.63 Aligned_cols=40 Identities=13% Similarity=0.017 Sum_probs=35.0
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETV 47 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~ 47 (474)
.+|.|+| .|.+|..+++.+...|.+|++.++++++.+.+.
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4688999 699999999999999999999999988776554
No 454
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=95.08 E-value=0.013 Score=57.98 Aligned_cols=90 Identities=13% Similarity=0.111 Sum_probs=53.5
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCC---cEEEE-eCC-hHHHHHHHHhhhhcCCCCccccC-CHHHHHhhcCCCcEEEE
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGF---PISVY-NRT-TSKVDETVERAKKEGDLPLFGFR-DPESFVNSIQKPRVIIM 79 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~---~V~v~-dr~-~~~~~~l~~~~~~~~~~~~~~~~-s~~e~~~~l~~~dvIil 79 (474)
+|||+|+| .|.+|+.+.+.|.+.+| ++... +++ ..+.-.+. +. .+.... ++++ .+. +|+||+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~--g~-----~i~~~~~~~~~-~~~---~DvV~~ 74 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA--ES-----SLRVGDVDSFD-FSS---VGLAFF 74 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET--TE-----EEECEEGGGCC-GGG---CSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccC--Cc-----ceEEecCCHHH-hcC---CCEEEE
Confidence 46899999 89999999999987765 44544 432 21100000 00 111111 2222 334 999999
Q ss_pred ecCCChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 80 LVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 80 ~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
|+|.. ...+.... +++.|..+||.|...
T Consensus 75 a~g~~-~s~~~a~~---~~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 75 AAAAE-VSRAHAER---ARAAGCSVIDLSGAL 102 (340)
T ss_dssp CSCHH-HHHHHHHH---HHHTTCEEEETTCTT
T ss_pred cCCcH-HHHHHHHH---HHHCCCEEEEeCCCC
Confidence 99875 33333333 345688899998765
No 455
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.08 E-value=0.049 Score=55.77 Aligned_cols=110 Identities=14% Similarity=0.269 Sum_probs=76.6
Q ss_pred cCcEEEEccc----------HhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcE
Q 011931 7 LTRIGLAGLA----------VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRV 76 (474)
Q Consensus 7 ~~~IgiIGlG----------~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dv 76 (474)
-.+|+|+|+. .-...++..|.+.|.+|.+||+... +...+... ++..+.++.++++. +|.
T Consensus 322 ~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~--~~~~~~~~-----~~~~~~~~~~~~~~---ad~ 391 (446)
T 4a7p_A 322 GKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGV--EQASKMLT-----DVEFVENPYAAADG---ADA 391 (446)
T ss_dssp TCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCH--HHHGGGCS-----SCCBCSCHHHHHTT---BSE
T ss_pred CCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCC--HhHHHhcC-----CceEecChhHHhcC---CCE
Confidence 3589999997 6688999999999999999998753 22221111 25567788888887 999
Q ss_pred EEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 77 IIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
|++++..++.-.--++.+...+ ++.+|+|+-+..... .+++.|+.|...+
T Consensus 392 vvi~t~~~~f~~~d~~~~~~~~-~~~~i~D~r~~~~~~------~~~~~g~~y~~iG 441 (446)
T 4a7p_A 392 LVIVTEWDAFRALDLTRIKNSL-KSPVLVDLRNIYPPA------ELERAGLQYTGVG 441 (446)
T ss_dssp EEECSCCTTTTSCCHHHHHTTB-SSCBEECSSCCSCHH------HHHHTTCBCCCSS
T ss_pred EEEeeCCHHhhcCCHHHHHHhc-CCCEEEECCCCCCHH------HHHhcCCEEEEec
Confidence 9999988642111124455545 357899999887432 3456788876554
No 456
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=95.08 E-value=0.091 Score=48.55 Aligned_cols=85 Identities=8% Similarity=0.144 Sum_probs=54.9
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~ 84 (474)
++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+.+.+... +. .. .++.++ =+.+.
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~-~~---~~~~~~~~D~~~~ 69 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIA--------------NK-YG---VKAHGVEMNLLSE 69 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH--------------HH-HC---CCEEEEECCTTCH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH--------------hh-cC---CceEEEEccCCCH
Confidence 3466665 7999999999999999999999999887765543221 00 01 222222 23334
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
..++.+++++.....+=++||++...
T Consensus 70 ~~~~~~~~~~~~~~~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 70 ESINKAFEEIYNLVDGIDILVNNAGI 95 (248)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 45666666666555555778877654
No 457
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.08 E-value=0.02 Score=54.52 Aligned_cols=37 Identities=24% Similarity=0.433 Sum_probs=34.0
Q ss_pred CcCcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHH
Q 011931 6 QLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSK 42 (474)
Q Consensus 6 ~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~ 42 (474)
++|+|.|.|+|.+|+.++..|++.|++|++.+|++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3578999999999999999999999999999998765
No 458
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.08 E-value=0.077 Score=52.05 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=35.9
Q ss_pred CCCCCCcCcEEEEcccHhHHHHHHHHHHCCCcEEE-EeC--ChHHHHHHHHh
Q 011931 1 MVEGKQLTRIGLAGLAVMGQNLALNIAEKGFPISV-YNR--TTSKVDETVER 49 (474)
Q Consensus 1 m~~~~~~~~IgiIGlG~mG~~lA~~L~~~G~~V~v-~dr--~~~~~~~l~~~ 49 (474)
|++-..+.||||.|.|++|+.+++.+...|.+|.. .|+ +.+.+..+.+.
T Consensus 1 ~~~~~~~~kvgInGFGRIGrlv~R~~~~~~veivainDp~~d~~~~a~l~~y 52 (346)
T 3h9e_O 1 MVSVARELTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKY 52 (346)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHC
T ss_pred CcccCCeeEEEEECCChHHHHHHHHHHhCCCEEEEEeCCCCChhHhcccccc
Confidence 56666788999999999999999999888888775 564 56666666654
No 459
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=95.07 E-value=0.13 Score=48.12 Aligned_cols=83 Identities=13% Similarity=0.206 Sum_probs=55.4
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... . ...+..=+.+...
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~---~~~~~~D~~~~~~ 69 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD-----------------A---ALAVAADISKEAD 69 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT-----------------T---EEEEECCTTSHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC-----------------c---eEEEEecCCCHHH
Confidence 3466676 67899999999999999999999999887776543210 0 1222223344445
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++.+...+.+=+++|++...
T Consensus 70 ~~~~~~~~~~~~g~id~li~~Ag~ 93 (261)
T 3n74_A 70 VDAAVEAALSKFGKVDILVNNAGI 93 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCcc
Confidence 666666666555555777776554
No 460
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=95.07 E-value=0.15 Score=45.61 Aligned_cols=116 Identities=9% Similarity=0.041 Sum_probs=73.7
Q ss_pred CcEEEEcccHhHHHHHHHHHHCC--CcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhhcCCCcEEEEecCCC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKG--FPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
.+|--||+|. |. ++..+++.+ .+|+++|.+++.++.+.+.....+..++.. ..+..+....+...|+|++..+..
T Consensus 42 ~~vLDiG~G~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 119 (204)
T 3e05_A 42 LVMWDIGAGS-AS-VSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG 119 (204)
T ss_dssp CEEEEETCTT-CH-HHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT
T ss_pred CEEEEECCCC-CH-HHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc
Confidence 4788999986 44 455566655 799999999998877665432211001222 223333333334589999877654
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGL 127 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~ 127 (474)
....+++.+...|++|..++-... .........+.+.+.|+
T Consensus 120 -~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 120 -MLEEIIDAVDRRLKSEGVIVLNAV-TLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp -CHHHHHHHHHHHCCTTCEEEEEEC-BHHHHHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHHhcCCCeEEEEEec-ccccHHHHHHHHHHCCC
Confidence 677888888888988876654332 22455566677777885
No 461
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.07 E-value=0.025 Score=53.72 Aligned_cols=70 Identities=14% Similarity=0.255 Sum_probs=48.1
Q ss_pred CcEEEEcc-cHhHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhcCCCcEEEEecC
Q 011931 8 TRIGLAGL-AVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSIQKPRVIIMLVK 82 (474)
Q Consensus 8 ~~IgiIGl-G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--~~s~~e~~~~l~~~dvIil~vp 82 (474)
|+|.|.|. |.+|+.++..|++. |++|++.+|++++...+...+.. +.. ..+.+++.+.++++|+||.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~-----~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVE-----VRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCE-----EEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCe-----EEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 46889985 99999999999998 99999999998776655432210 111 1233444444445888887664
No 462
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=95.05 E-value=0.12 Score=48.14 Aligned_cols=83 Identities=12% Similarity=0.155 Sum_probs=51.7
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCCh-HHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTT-SKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~-~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
++|-|.| .|.+|..+++.|++.|++|.+.+|++ ++.++..+... .. ...+..=+.+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~~~~ 67 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG-----------------RR---VLTVKCDVSQPG 67 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT-----------------CC---EEEEECCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcC-----------------Cc---EEEEEeecCCHH
Confidence 4566665 78999999999999999999999998 66543211100 00 111222233334
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++++...+.+=+++|++...
T Consensus 68 ~v~~~~~~~~~~~g~id~lv~nAg~ 92 (249)
T 2ew8_A 68 DVEAFGKQVISTFGRCDILVNNAGI 92 (249)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5666666665555555777776654
No 463
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.01 E-value=0.054 Score=53.83 Aligned_cols=94 Identities=21% Similarity=0.243 Sum_probs=59.8
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHh-hhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER-AKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+. +.. .+.-..+.+.+.+.....|+||-++.....
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~----~v~~~~~~~~~~~~~~~~D~vid~~g~~~~ 264 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD----SFLVSRDQEQMQAAAGTLDGIIDTVSAVHP 264 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS----EEEETTCHHHHHHTTTCEEEEEECCSSCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc----eEEeccCHHHHHHhhCCCCEEEECCCcHHH
Confidence 479999999999999999999999999999999988776632 221 011112222222212347888888875433
Q ss_pred HHHHHHHHHhcccCCCEEEecCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st 109 (474)
++..+ +.+.++..++..+.
T Consensus 265 ~~~~~----~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 LLPLF----GLLKSHGKLILVGA 283 (366)
T ss_dssp SHHHH----HHEEEEEEEEECCC
T ss_pred HHHHH----HHHhcCCEEEEEcc
Confidence 34333 34445555665554
No 464
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=95.00 E-value=0.087 Score=49.10 Aligned_cols=86 Identities=13% Similarity=0.190 Sum_probs=53.6
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
++|-|.| .|.+|..+++.|+++|++|.+.+|++++.+++.+.... .. .+..++..=+.+...
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----------------~~-~~~~~~~~D~~~~~~ 76 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM----------------EG-HDVSSVVMDVTNTES 76 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------------TT-CCEEEEECCTTCHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------------cC-CceEEEEecCCCHHH
Confidence 3566776 79999999999999999999999998876655432210 00 001222222333345
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=++||++...
T Consensus 77 ~~~~~~~~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 77 VQNAVRSVHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 556666555544445677776653
No 465
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=94.99 E-value=0.095 Score=48.54 Aligned_cols=87 Identities=11% Similarity=0.134 Sum_probs=54.9
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
++|-|.| .|.+|..++..|++.|++|.+.+|++++.+++.+.... .. -.. ..++..=+.+...
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~------~~~---~~~~~~D~~~~~~ 66 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH-------AY------ADK---VLRVRADVADEGD 66 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHST-------TT------GGG---EEEEECCTTCHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-------hc------CCc---EEEEEecCCCHHH
Confidence 3566776 69999999999999999999999998877665543200 00 011 2222222333445
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=++||++...
T Consensus 67 ~~~~~~~~~~~~~~id~li~~Ag~ 90 (250)
T 2cfc_A 67 VNAAIAATMEQFGAIDVLVNNAGI 90 (250)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 666666665555455777776653
No 466
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=94.99 E-value=0.11 Score=49.55 Aligned_cols=85 Identities=16% Similarity=0.293 Sum_probs=56.4
Q ss_pred cEEEE-c-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCC-cEEEEecCCCh
Q 011931 9 RIGLA-G-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKP-RVIIMLVKAGA 85 (474)
Q Consensus 9 ~IgiI-G-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~-dvIil~vp~~~ 85 (474)
|+.+| | .|-+|..+|+.|++.|++|.+.+|++++.+++.+... +.-.. . ..+-.=+.+..
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~---~~~~~~~Dv~d~~ 96 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIG--------------GRTGN---IVRAVVCDVGDPD 96 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--------------HHHSS---CEEEEECCTTCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--------------hcCCC---eEEEEEcCCCCHH
Confidence 44444 5 7899999999999999999999999988776654321 11110 1 22222334445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++++.....+=+++|++...
T Consensus 97 ~v~~~~~~~~~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 97 QVAALFAAVRAEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 6777777776666566788887654
No 467
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.99 E-value=0.089 Score=48.77 Aligned_cols=86 Identities=12% Similarity=0.101 Sum_probs=57.5
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... -.. ...+-.=+.+...+
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--------------~~~---~~~~~~D~~~~~~~ 69 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--------------GFK---ARGLVLNISDIESI 69 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--------------TCC---EEEEECCTTCHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCc---eEEEEecCCCHHHH
Confidence 455666 789999999999999999999999998877665433210 000 22232333444567
Q ss_pred HHHHHHHHhcccCCCEEEecCCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+.+++++.....+=+++|++....
T Consensus 70 ~~~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 70 QNFFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHHHHHHHHTTCCCSEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 777777766555567888876543
No 468
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.99 E-value=0.072 Score=50.70 Aligned_cols=85 Identities=16% Similarity=0.159 Sum_probs=57.3
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... -.. ...+-.=+.+...+
T Consensus 34 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~---~~~~~~Dl~d~~~v 96 (276)
T 3r1i_A 34 RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--------------GGK---ALPIRCDVTQPDQV 96 (276)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--------------TCC---CEEEECCTTCHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCe---EEEEEcCCCCHHHH
Confidence 455566 789999999999999999999999988877665533210 001 22333334444567
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++++.....+=+++|++...
T Consensus 97 ~~~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 97 RGMLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 77777776666566788877654
No 469
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=94.96 E-value=0.17 Score=47.40 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=54.0
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+... . . ...+-.=+.+...
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~------~---~~~~~~D~~d~~~ 72 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----------N------G---GFAVEVDVTKRAS 72 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-----------T------C---CEEEECCTTCHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----------c------C---CeEEEEeCCCHHH
Confidence 3566666 7899999999999999999999999887765543210 0 1 2233233344445
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=+++|++...
T Consensus 73 v~~~~~~~~~~~g~iD~lv~~Ag~ 96 (263)
T 3ak4_A 73 VDAAMQKAIDALGGFDLLCANAGV 96 (263)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 666666655544445677776553
No 470
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.95 E-value=0.15 Score=52.50 Aligned_cols=114 Identities=13% Similarity=0.231 Sum_probs=76.6
Q ss_pred cCcEEEEcccH----------hHHHHHHHHHHCCCcEEEEeCChH--HHHHHH---------HhhhhcCCCCccccCCHH
Q 011931 7 LTRIGLAGLAV----------MGQNLALNIAEKGFPISVYNRTTS--KVDETV---------ERAKKEGDLPLFGFRDPE 65 (474)
Q Consensus 7 ~~~IgiIGlG~----------mG~~lA~~L~~~G~~V~v~dr~~~--~~~~l~---------~~~~~~~~~~~~~~~s~~ 65 (474)
..+|+|+|+.. -...++..|.+.|.+|.+||+.-. ...... .... ++..+.++.
T Consensus 329 ~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 403 (467)
T 2q3e_A 329 DKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSR-----LVTISKDPY 403 (467)
T ss_dssp TCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHH-----HEEECSSHH
T ss_pred CCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccC-----ceeecCCHH
Confidence 35799999875 788999999999999999998632 221111 0000 134556788
Q ss_pred HHHhhcCCCcEEEEecCCChhHHHH-HHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 66 SFVNSIQKPRVIIMLVKAGAPVDET-IKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 66 e~~~~l~~~dvIil~vp~~~~v~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
++++. +|.|++++..+ +.+.. .+.+...+....+|+|+-+.... ..+.+...|+.|...+
T Consensus 404 ~~~~~---ad~~vi~t~~~-~f~~~~~~~~~~~~~~~~~i~D~r~~~~~----~~~~~~~~g~~~~~ig 464 (467)
T 2q3e_A 404 EACDG---AHAVVICTEWD-MFKELDYERIHKKMLKPAFIFDGRRVLDG----LHNELQTIGFQIETIG 464 (467)
T ss_dssp HHHTT---CSEEEECSCCG-GGGGSCHHHHHHHSCSSCEEEESSCTTTT----CHHHHHHHTCEEEETT
T ss_pred HHHhC---CcEEEEecCCh-hhhcCCHHHHHHhcCCCCEEEeCCCcCCc----hHHHHHhcCcEEEEeC
Confidence 88777 99999999886 33321 34555556556669999888643 1223455688887654
No 471
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=94.94 E-value=0.054 Score=56.72 Aligned_cols=125 Identities=8% Similarity=0.091 Sum_probs=70.7
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh-cCCCCccccCCHHHHHhhcCCCcEEEEecCCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK-EGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~-~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~ 85 (474)
.+|.|||+|.+|..++.+|+..|. +++++|.+.=....+..+.-. ....+-.-+....+.+..+. +++-+.+.+.
T Consensus 33 ~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lN-p~v~v~~~~~-- 109 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELN-SDVSGSFVEE-- 109 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTC-TTSBCCEESS--
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhC-CCCeEEEeCC--
Confidence 589999999999999999999998 899999875333334332100 00000011112233333332 3444444443
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsg 136 (474)
.+..+++.....+..-++||+++-. +..-..+.+.+...++.++.+.+.|
T Consensus 110 ~~~~~~~~~~~~~~~~DvVi~~~d~-~~~r~~ln~~c~~~~iplI~~~~~G 159 (531)
T 1tt5_A 110 SPENLLDNDPSFFCRFTVVVATQLP-ESTSLRLADVLWNSQIPLLICRTYG 159 (531)
T ss_dssp CHHHHHHSCGGGGGGCSEEEEESCC-HHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred CcchhhhhhHHHhcCCCEEEEeCCC-HHHHHHHHHHHHHcCCCEEEEEecC
Confidence 2343333233345556888888543 3344445556667788888775444
No 472
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=94.94 E-value=0.15 Score=47.56 Aligned_cols=82 Identities=12% Similarity=0.164 Sum_probs=56.0
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+.... . ...+-+=+.+...+
T Consensus 11 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~---~~~~~~Dv~d~~~v 70 (248)
T 3op4_A 11 VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----------------N---GKGMALNVTNPESI 70 (248)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----------------G---EEEEECCTTCHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----------------c---ceEEEEeCCCHHHH
Confidence 344555 78999999999999999999999999887766543210 1 12222234444567
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++++.....+=+++|++...
T Consensus 71 ~~~~~~~~~~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 71 EAVLKAITDEFGGVDILVNNAGI 93 (248)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 77777776666566788887654
No 473
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=94.94 E-value=0.048 Score=55.13 Aligned_cols=170 Identities=10% Similarity=0.148 Sum_probs=100.9
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcE-EEEeCC----------hHHHHHHHHhhhhcCCCCccc----cCCHHHHHhhcC
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPI-SVYNRT----------TSKVDETVERAKKEGDLPLFG----FRDPESFVNSIQ 72 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V-~v~dr~----------~~~~~~l~~~~~~~~~~~~~~----~~s~~e~~~~l~ 72 (474)
++|.|-|.|++|...|+.|.+.|.+| .+.|.+ .+.+.++.+... .+.. .-+.+++...
T Consensus 222 ~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g-----~i~~~~a~~~~~~~i~~~-- 294 (424)
T 3k92_A 222 ARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFG-----MVTNLFTDVITNEELLEK-- 294 (424)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSS-----CCGGGCSCCBCHHHHHHS--
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhC-----CCCCCCcEEecCccceec--
Confidence 57999999999999999999999987 477877 555555443211 1111 1244555442
Q ss_pred CCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC--CCCCcccccCCCccccC
Q 011931 73 KPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG--VSGGEEGARHGPSLMPG 150 (474)
Q Consensus 73 ~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p--vsgg~~~a~~G~~i~~g 150 (474)
.||+.+-|-.... +. .+-.+.+ .-++|+..+|.. .+.+..+.|.++|+.|+..- -.||.
T Consensus 295 ~~DIliPcA~~n~-I~---~~~a~~l-~ak~V~EgAN~p--~t~eA~~iL~~rGI~~~PD~~aNAGGV------------ 355 (424)
T 3k92_A 295 DCDILVPAAISNQ-IT---AKNAHNI-QASIVVERANGP--TTIDATKILNERGVLLVPDILASAGGV------------ 355 (424)
T ss_dssp CCSEEEECSCSSC-BC---TTTGGGC-CCSEEECCSSSC--BCHHHHHHHHHTTCEEECHHHHTTHHH------------
T ss_pred cccEEeecCcccc-cC---hhhHhhc-CceEEEcCCCCC--CCHHHHHHHHHCCCEEECchHhcCCCE------------
Confidence 4999988876542 11 1223334 567888888886 34566778889999887532 22221
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCCceEEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011931 151 GSFEAYKYIEDILLKVAAQVPDSGPCVTYVSKGGSGNFVKMIHNGIEYGDMQLIAEAYDVLKSVGKLTNEELQNV 225 (474)
Q Consensus 151 g~~~~~~~v~~ll~~lg~~~~~~~~~~~~~g~~g~g~~~K~v~N~~~~~~~~~i~Ea~~l~~~~G~l~~~~~~~~ 225 (474)
.-..++.++.+ .. ..+- ..-+...+...+...+.+.+..+++.+ ++..+...+
T Consensus 356 -~vS~~E~~qn~----~~--------~~w~--------~eeV~~~l~~~m~~~~~~v~~~a~~~~-~~~~~aA~~ 408 (424)
T 3k92_A 356 -TVSYFEWVQNN----QG--------YYWS--------EEEVAEKLRSVMVSSFETIYQTAATHK-VDMRLAAYM 408 (424)
T ss_dssp -HHHHHHHHHHH----HT--------CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHT-CCHHHHHHH
T ss_pred -EeehhHHHhcc----cc--------cCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHhC-cCHHHHHHH
Confidence 11122322221 11 0110 123444455556666777888888888 887665544
No 474
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=94.94 E-value=0.019 Score=53.30 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=31.1
Q ss_pred cCcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHH
Q 011931 7 LTRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSK 42 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~ 42 (474)
|++|-|.| .|.+|..++..|++.|++|++.+|++++
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~ 37 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQAD 37 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 34688887 4999999999999999999999998754
No 475
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=94.91 E-value=0.03 Score=55.91 Aligned_cols=92 Identities=17% Similarity=0.235 Sum_probs=52.9
Q ss_pred cCcEEEEc-ccHhHHHHHH-HHHHCCC---cEEEEeC-ChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe
Q 011931 7 LTRIGLAG-LAVMGQNLAL-NIAEKGF---PISVYNR-TTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML 80 (474)
Q Consensus 7 ~~~IgiIG-lG~mG~~lA~-~L~~~G~---~V~v~dr-~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~ 80 (474)
|+||||+| .|.+|+.+.+ .|.++.+ .+..+.. +..+ .+...... ...+....+++++ +. +|+||.|
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--~v~~~~g~--~i~~~~~~~~~~~-~~---~DvVf~a 72 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAPSFGGT--TGTLQDAFDLEAL-KA---LDIIVTC 72 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCCGGGTC--CCBCEETTCHHHH-HT---CSEEEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--CccccCCC--ceEEEecCChHHh-cC---CCEEEEC
Confidence 56999999 9999999999 5555554 3333332 2211 11000000 0012222245554 44 9999999
Q ss_pred cCCChhHHHHHHHHHhcccCCC--EEEecCCC
Q 011931 81 VKAGAPVDETIKTLSAYMEKGD--CIIDGGNE 110 (474)
Q Consensus 81 vp~~~~v~~vl~~l~~~l~~g~--iiId~st~ 110 (474)
+|.. ...+....+. +.|. +|||.|+.
T Consensus 73 ~g~~-~s~~~a~~~~---~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 73 QGGD-YTNEIYPKLR---ESGWQGYWIDAASS 100 (367)
T ss_dssp SCHH-HHHHHHHHHH---HTTCCCEEEECSST
T ss_pred CCch-hHHHHHHHHH---HCCCCEEEEcCChh
Confidence 9965 3444444433 4564 99999876
No 476
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=94.91 E-value=0.071 Score=50.34 Aligned_cols=91 Identities=12% Similarity=0.092 Sum_probs=56.8
Q ss_pred CCCCCCcCcEEEEc---ccHhHHHHHHHHHHCCCcEEEEeCChHHH-HHHHHhhhhcCCCCccccCCHHHHHhhcCCCcE
Q 011931 1 MVEGKQLTRIGLAG---LAVMGQNLALNIAEKGFPISVYNRTTSKV-DETVERAKKEGDLPLFGFRDPESFVNSIQKPRV 76 (474)
Q Consensus 1 m~~~~~~~~IgiIG---lG~mG~~lA~~L~~~G~~V~v~dr~~~~~-~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dv 76 (474)
|+...+.+++-|.| .|.+|..+|+.|++.|++|.+.+|++++. +++.+.. . .. ...
T Consensus 1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~------~~---~~~ 60 (269)
T 2h7i_A 1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-----------P------AK---APL 60 (269)
T ss_dssp -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-----------S------SC---CCE
T ss_pred CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-----------C------CC---ceE
Confidence 43333334577778 58999999999999999999999997653 3332210 0 01 333
Q ss_pred EEEecCCChhHHHHHHHHHhccc---CCCEEEecCCCC
Q 011931 77 IIMLVKAGAPVDETIKTLSAYME---KGDCIIDGGNEW 111 (474)
Q Consensus 77 Iil~vp~~~~v~~vl~~l~~~l~---~g~iiId~st~~ 111 (474)
+..=+.+...++.+++++..... +=+++|++....
T Consensus 61 ~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 61 LELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM 98 (269)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCC
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccC
Confidence 43344455566777776665543 336777776543
No 477
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=94.88 E-value=0.089 Score=51.20 Aligned_cols=88 Identities=9% Similarity=0.112 Sum_probs=56.6
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
++|-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... ... .. ..++.+=+.+...
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~--------~~~----~~---~~~~~~Dl~~~~~ 73 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE--------GSG----PE---VMGVQLDVASREG 73 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------TCG----GG---EEEEECCTTCHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--------CCC----Ce---EEEEECCCCCHHH
Confidence 3566776 689999999999999999999999998887766533110 000 01 2222223344456
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++.+.....+=+++|++...
T Consensus 74 v~~~~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 74 FKMAADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHHHHHHHTCCEEEEEECCCC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCc
Confidence 666776666554444677776653
No 478
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=94.88 E-value=0.13 Score=48.61 Aligned_cols=84 Identities=14% Similarity=0.220 Sum_probs=54.5
Q ss_pred CcEEEE-c-ccHhHHHHHHHHHHCCCcEEEE-eCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecC
Q 011931 8 TRIGLA-G-LAVMGQNLALNIAEKGFPISVY-NRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVK 82 (474)
Q Consensus 8 ~~IgiI-G-lG~mG~~lA~~L~~~G~~V~v~-dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp 82 (474)
+|+.+| | .|.+|..+|+.|++.|++|.+. +|+++..+.+.+.... .. .++.++ =+.
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~----------------~~---~~~~~~~~Dl~ 86 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE----------------SG---GEAVAIPGDVG 86 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----------------TT---CEEEEEECCTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh----------------cC---CcEEEEEcCCC
Confidence 344455 4 7999999999999999999765 8888777665543211 01 233333 233
Q ss_pred CChhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 83 AGAPVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 83 ~~~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+...++.+++++.....+=+++|++...
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~li~nAg~ 114 (272)
T 4e3z_A 87 NAADIAAMFSAVDRQFGRLDGLVNNAGI 114 (272)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 4455667777776655555788887654
No 479
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=94.86 E-value=0.08 Score=55.89 Aligned_cols=125 Identities=14% Similarity=0.022 Sum_probs=65.2
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhh-hcCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAK-KEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~-~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
..+|.|||+|.+|+.+|.+|+..|. +++++|.+.-....+..+.- .....+..-+....+.+..+. +++-+.+.+..
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN-P~V~v~~~~~~ 404 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF-PLMDATGVKLS 404 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC-TTCEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC-CCcEEEEeecc
Confidence 3589999999999999999999997 78999987521111111100 000000001112222222221 44444444310
Q ss_pred ---------hhHHHHH--HHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecC
Q 011931 85 ---------APVDETI--KTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMG 133 (474)
Q Consensus 85 ---------~~v~~vl--~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~p 133 (474)
...+..+ +.+...+..-++|||++-... .-..+...+...++.++.+.
T Consensus 405 Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~-tR~~ln~~c~~~~~PlI~aa 463 (615)
T 4gsl_A 405 IPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE-SRWLPSLLSNIENKTVINAA 463 (615)
T ss_dssp CCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGG-GTHHHHHHHHHTTCEEEEEE
T ss_pred ccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHH-HHHHHHHHHHHcCCeEEEEE
Confidence 0001111 223334456689999876643 32344455566788887753
No 480
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.86 E-value=0.014 Score=57.75 Aligned_cols=41 Identities=15% Similarity=0.314 Sum_probs=35.5
Q ss_pred CcCcEEEEc-ccHhHHHHHHHHHHC-CCcEEEEeCChHHHHHH
Q 011931 6 QLTRIGLAG-LAVMGQNLALNIAEK-GFPISVYNRTTSKVDET 46 (474)
Q Consensus 6 ~~~~IgiIG-lG~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l 46 (474)
+||+|.|.| .|.+|+.++..|++. |++|++.+|++++...+
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~ 65 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL 65 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh
Confidence 457899999 799999999999998 99999999998765443
No 481
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=94.85 E-value=0.16 Score=47.36 Aligned_cols=83 Identities=10% Similarity=0.085 Sum_probs=54.4
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+...
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~D~~~~~~ 65 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-----------------DA---ARYQHLDVTIEED 65 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG-----------------GG---EEEEECCTTCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----------------Cc---eeEEEecCCCHHH
Confidence 3566776 6899999999999999999999999887765543210 01 1222222333445
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=+++|++...
T Consensus 66 ~~~~~~~~~~~~g~iD~lv~nAg~ 89 (254)
T 1hdc_A 66 WQRVVAYAREEFGSVDGLVNNAGI 89 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 666666666555455777776654
No 482
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=94.85 E-value=0.15 Score=48.35 Aligned_cols=82 Identities=11% Similarity=0.085 Sum_probs=53.4
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++-|.| .|-+|.++|+.|++.|++|.+.+|++++.+++.+... .. ...+-.=+.+...+
T Consensus 29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~d~~~v 88 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG-----------------SK---AFGVRVDVSSAKDA 88 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-----------------TT---EEEEECCTTCHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----------------Cc---eEEEEecCCCHHHH
Confidence 344555 7899999999999999999999999888776654321 00 11122223344456
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++.+.....+=+++|++...
T Consensus 89 ~~~~~~~~~~~g~iD~lv~nAg~ 111 (277)
T 4dqx_A 89 ESMVEKTTAKWGRVDVLVNNAGF 111 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 66666665555555777776653
No 483
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=94.83 E-value=0.14 Score=48.42 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=54.9
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .. ...+-.=+.+...+
T Consensus 29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~d~~~v 88 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG-----------------KD---VFVFSANLSDRKSI 88 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----------------SS---EEEEECCTTSHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----------------Cc---eEEEEeecCCHHHH
Confidence 344445 7899999999999999999999999888776544221 00 12222223444566
Q ss_pred HHHHHHHHhcccCCCEEEecCCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
+.+++.+.....+=+++|++....
T Consensus 89 ~~~~~~~~~~~g~iD~lvnnAg~~ 112 (266)
T 3grp_A 89 KQLAEVAEREMEGIDILVNNAGIT 112 (266)
T ss_dssp HHHHHHHHHHHTSCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 666666666555557888876653
No 484
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=94.81 E-value=0.04 Score=54.22 Aligned_cols=98 Identities=13% Similarity=0.241 Sum_probs=54.6
Q ss_pred cCcEEEEcccHhHHHHHHHHHHC-CCcEEEE-eC-ChHHHHHHHHhhhhcCC----------------CCcccc--CCHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEK-GFPISVY-NR-TTSKVDETVERAKKEGD----------------LPLFGF--RDPE 65 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~-G~~V~v~-dr-~~~~~~~l~~~~~~~~~----------------~~~~~~--~s~~ 65 (474)
|+||||+|.|.+|+.+.+.|.++ .++|... |+ +++....+.+.....|. ..+... .+++
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE 80 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred CeEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCChh
Confidence 46899999999999999999876 3566544 54 44455455432110000 011111 1343
Q ss_pred HHH-hhcCCCcEEEEecCCChhHHHHHHHHHhcccCCC--EEEecCC
Q 011931 66 SFV-NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGD--CIIDGGN 109 (474)
Q Consensus 66 e~~-~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~--iiId~st 109 (474)
++- .. ..+|+||.|+|.....+ ... .+++.|. +|||.+.
T Consensus 81 ~i~w~~-~~vDvV~~atg~~~s~e-~a~---~~l~~Gak~vVId~pa 122 (334)
T 3cmc_O 81 NLAWGE-IGVDIVVESTGRFTKRE-DAA---KHLEAGAKKVIISAPA 122 (334)
T ss_dssp GCCTGG-GTCCEEEECSSSCCBHH-HHT---HHHHTTCSEEEESSCC
T ss_pred hcCccc-CccCEEEECCCchhhHH-HHH---HHHHCCCCEEEEeCCC
Confidence 331 10 03788888888764332 222 2344566 8888765
No 485
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=94.81 E-value=0.12 Score=48.70 Aligned_cols=86 Identities=10% Similarity=0.146 Sum_probs=55.7
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
++|-|.| .|.+|..++..|++.|++|.+.+|++++.+++.+.... .-.. ..++..=+.+...
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--------------~~~~---~~~~~~Dl~~~~~ 94 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG--------------LGAK---VHTFVVDCSNRED 94 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--------------TTCC---EEEEECCTTCHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh--------------cCCe---EEEEEeeCCCHHH
Confidence 3566776 78999999999999999999999998877665443210 0000 1222222334445
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=++||++...
T Consensus 95 v~~~~~~~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 95 IYSSAKKVKAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHHHHHHHHHTCCCSEEEECCCC
T ss_pred HHHHHHHHHHHCCCCcEEEECCCc
Confidence 666666666555555788887654
No 486
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=94.80 E-value=0.16 Score=48.18 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=55.6
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~~ 85 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|+.++.++..+... +.. . .++.++ =+.+..
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~-~---~~~~~~~~Dv~~~~ 90 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLA--------------GAT-G---RRCLPLSMDVRAPP 90 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH--------------HHH-S---SCEEEEECCTTCHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--------------Hhc-C---CcEEEEEcCCCCHH
Confidence 355555 6789999999999999999999999887766554321 000 1 223322 234445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++++.....+=+++|++...
T Consensus 91 ~v~~~~~~~~~~~g~id~lv~nAg~ 115 (277)
T 4fc7_A 91 AVMAAVDQALKEFGRIDILINCAAG 115 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcC
Confidence 6667777776666566788887653
No 487
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=94.80 E-value=0.12 Score=49.14 Aligned_cols=84 Identities=14% Similarity=0.183 Sum_probs=53.7
Q ss_pred EEEEc-ccHhHHHHHHHHHHCCCcEEEEeC-ChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChhH
Q 011931 10 IGLAG-LAVMGQNLALNIAEKGFPISVYNR-TTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPV 87 (474)
Q Consensus 10 IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~v 87 (474)
+-|.| .|-+|..+|+.|++.|++|.+.++ ++++.+++.+..... -.. ...+..=+.+...+
T Consensus 32 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--------------~~~---~~~~~~Dv~d~~~v 94 (280)
T 4da9_A 32 AIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--------------GAR---VIFLRADLADLSSH 94 (280)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--------------TCC---EEEEECCTTSGGGH
T ss_pred EEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--------------CCc---EEEEEecCCCHHHH
Confidence 45555 789999999999999999999985 676666554432110 000 22222234455567
Q ss_pred HHHHHHHHhcccCCCEEEecCCC
Q 011931 88 DETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 88 ~~vl~~l~~~l~~g~iiId~st~ 110 (474)
+.+++.+.....+=+++|++...
T Consensus 95 ~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 95 QATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHHHHHHSCCCEEEEECC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 77777776666556778777654
No 488
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=94.79 E-value=0.093 Score=49.19 Aligned_cols=83 Identities=14% Similarity=0.161 Sum_probs=55.7
Q ss_pred cEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE--EecCCCh
Q 011931 9 RIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII--MLVKAGA 85 (474)
Q Consensus 9 ~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi--l~vp~~~ 85 (474)
++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+..... . .++.+ .=+.+..
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~---~~~~~~~~Dv~d~~ 74 (256)
T 3gaf_A 14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA----------------G---GKAIGLECNVTDEQ 74 (256)
T ss_dssp EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT----------------T---CCEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------C---CcEEEEECCCCCHH
Confidence 344455 789999999999999999999999998877665532110 1 22222 2334445
Q ss_pred hHHHHHHHHHhcccCCCEEEecCCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
.++.+++++.....+=+++|++...
T Consensus 75 ~v~~~~~~~~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 75 HREAVIKAALDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 6667777666665556788876654
No 489
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=94.77 E-value=0.16 Score=47.51 Aligned_cols=87 Identities=14% Similarity=0.228 Sum_probs=54.0
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+... +.... .+..++..=+.+...
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~-~~~~~~~~D~~~~~~ 72 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIA--------------SLVSG-AQVDIVAGDIREPGD 72 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--------------HHSTT-CCEEEEECCTTCHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--------------hcCCC-CeEEEEEccCCCHHH
Confidence 3566666 7899999999999999999999999887766544221 00000 001222222334445
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++..... =+++|++...
T Consensus 73 v~~~~~~~~~~~g-id~lv~~Ag~ 95 (260)
T 2z1n_A 73 IDRLFEKARDLGG-ADILVYSTGG 95 (260)
T ss_dssp HHHHHHHHHHTTC-CSEEEECCCC
T ss_pred HHHHHHHHHHhcC-CCEEEECCCC
Confidence 6666666655444 4677776653
No 490
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=94.77 E-value=0.12 Score=51.79 Aligned_cols=103 Identities=14% Similarity=0.141 Sum_probs=64.3
Q ss_pred CcEEEEcccHhHHH-HHHHHHHCCCcEEEEeCChHHHHHHHHhhhhc----CC-------CCcccc-CCHHHHHhhcCCC
Q 011931 8 TRIGLAGLAVMGQN-LALNIAEKGFPISVYNRTTSKVDETVERAKKE----GD-------LPLFGF-RDPESFVNSIQKP 74 (474)
Q Consensus 8 ~~IgiIGlG~mG~~-lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~----~~-------~~~~~~-~s~~e~~~~l~~~ 74 (474)
||+-.+|+|++|++ ++..|.+.|++|+..|++...++.+.+++.-. |. .+++.. ...+++++.+..+
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~~i~~a 80 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQV 80 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTTCEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHHHHTTC
T ss_pred CcEEEECCCccchhhHHHHHHHcCCeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHHHHcCC
Confidence 68889999999977 45667789999999999999999988764210 00 012221 1223444444459
Q ss_pred cEEEEecCCChhHHHHHHHHHhcc--------cCCCEEEecCCCC
Q 011931 75 RVIIMLVKAGAPVDETIKTLSAYM--------EKGDCIIDGGNEW 111 (474)
Q Consensus 75 dvIil~vp~~~~v~~vl~~l~~~l--------~~g~iiId~st~~ 111 (474)
|+|.+++.+. ..+.+...|...| .++-+|+.|=|..
T Consensus 81 dlitT~vG~~-~l~~i~~~l~~~L~~R~~~~~~~pltilsCeN~~ 124 (382)
T 3h2z_A 81 DLVTTAVGPV-VLERIAPAIAKGLVKRKEQGNESPLNIIACENMV 124 (382)
T ss_dssp SEEEECCCHH-HHHHTHHHHHHHHHHHHHHTCCSCEEEEECCSST
T ss_pred CEEEECCCcc-cHHHHHHHHHHHHHHHHHcCCCCCcEEEECCCcc
Confidence 9988888753 4444433332222 2445677777765
No 491
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=94.77 E-value=0.12 Score=48.13 Aligned_cols=81 Identities=11% Similarity=0.144 Sum_probs=54.6
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEE--EecCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVII--MLVKAG 84 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIi--l~vp~~ 84 (474)
+++-|.| .|-+|..+|+.|++.|++|.+.+|++++.+++.+... .++.+ .=+.+.
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------------~~~~~~~~Dv~~~ 64 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----------------------KKARAIAADISDP 64 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----------------------TTEEECCCCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------------CceEEEEcCCCCH
Confidence 3466666 6899999999999999999999999988776654321 11111 112333
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
..++.+++++.....+=+++|++...
T Consensus 65 ~~v~~~~~~~~~~~g~id~lv~nAg~ 90 (247)
T 3rwb_A 65 GSVKALFAEIQALTGGIDILVNNASI 90 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCC
Confidence 45666666666655555777776654
No 492
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=94.77 E-value=0.1 Score=49.39 Aligned_cols=83 Identities=17% Similarity=0.204 Sum_probs=55.8
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+... .. ...+..=+.+...
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~---~~~~~~Dv~~~~~ 65 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP-----------------DR---AEAISLDVTDGER 65 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT-----------------TT---EEEEECCTTCHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-----------------CC---ceEEEeeCCCHHH
Confidence 3455555 6999999999999999999999999887766554211 01 2233333444456
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=++||++...
T Consensus 66 ~~~~~~~~~~~~g~id~lv~~Ag~ 89 (281)
T 3m1a_A 66 IDVVAADVLARYGRVDVLVNNAGR 89 (281)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCc
Confidence 666666666555555788877654
No 493
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.75 E-value=0.092 Score=48.26 Aligned_cols=85 Identities=14% Similarity=0.250 Sum_probs=53.3
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEe--cCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIML--VKAG 84 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~--vp~~ 84 (474)
+++-|.| .|.+|..+|+.|++.|++|.+.+|++++.+++.+.... + .. .++.++. +.+.
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------------~--~~---~~~~~~~~D~~~~ 64 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ-------------E--QG---VEVFYHHLDVSKA 64 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------------H--HC---CCEEEEECCTTCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------------h--cC---CeEEEEEeccCCH
Confidence 3466666 68899999999999999999999999887766543210 0 01 2333322 3333
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
..++.+++++.....+=+++|++...
T Consensus 65 ~~v~~~~~~~~~~~g~id~li~~Ag~ 90 (235)
T 3l77_A 65 ESVEEFSKKVLERFGDVDVVVANAGL 90 (235)
T ss_dssp HHHHHHCC-HHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCcc
Confidence 44555555555444455677776554
No 494
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.74 E-value=0.18 Score=50.69 Aligned_cols=98 Identities=5% Similarity=-0.030 Sum_probs=59.3
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhhcCCCCccc--cCCHHHHHhhc---CCCcEEEEec
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKKEGDLPLFG--FRDPESFVNSI---QKPRVIIMLV 81 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~~~--~~s~~e~~~~l---~~~dvIil~v 81 (474)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.+... +.- ..+..+.+..+ ...|+||-++
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~----vi~~~~~~~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH----VIDPTKENFVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE----EECTTTSCHHHHHHHHTTTCCCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE----EEcCCCCCHHHHHHHHhCCCCCCEEEECC
Confidence 479999999999998888888999 8999999999988776655321 110 11222222221 1377888777
Q ss_pred CCCh-hHHHHHHHHHhcccCCCEEEecCC
Q 011931 82 KAGA-PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 82 p~~~-~v~~vl~~l~~~l~~g~iiId~st 109 (474)
.... .....++.+...+.++-.++..+.
T Consensus 291 g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 291 GVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp SCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 6542 122222222122256666665554
No 495
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.73 E-value=0.17 Score=50.12 Aligned_cols=125 Identities=10% Similarity=0.086 Sum_probs=65.9
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHhhhh-cCCCCccccCCHHHHHhhcCCCcEEEEecCCC
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKGF-PISVYNRTTSKVDETVERAKK-EGDLPLFGFRDPESFVNSIQKPRVIIMLVKAG 84 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~-~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~ 84 (474)
..+|.|||+|..|+.++.+|+..|. +++++|.+.-....+..+.-. ....+-.-+....+.+..+. +++-+.+.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~v~v~~~~~~ 196 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRN-SEISVSEIALN 196 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHC-CCCeEEEeecc
Confidence 3579999999999999999999997 799999874222111111000 00000000111222222211 34444443322
Q ss_pred hhHHHHHHHHHhcccCCCEEEecCCCCchhHHHHHHHHHHcCCeEEecCCCC
Q 011931 85 APVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSG 136 (474)
Q Consensus 85 ~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v~~pvsg 136 (474)
-.-+. .+.. +..-++|||++-.....-..+.+.+...++.++.+.+.|
T Consensus 197 i~~~~---~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g 244 (353)
T 3h5n_A 197 INDYT---DLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVN 244 (353)
T ss_dssp CCSGG---GGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred cCchh---hhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 10000 1223 566789999775543233344566667788888765543
No 496
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.72 E-value=0.1 Score=51.14 Aligned_cols=97 Identities=13% Similarity=0.194 Sum_probs=55.5
Q ss_pred CcEEEEcccHhHHHHHHHHHHC---CCcEEEE-eC-ChHHHHHHHHhhhhcCCC----------------Ccccc--CCH
Q 011931 8 TRIGLAGLAVMGQNLALNIAEK---GFPISVY-NR-TTSKVDETVERAKKEGDL----------------PLFGF--RDP 64 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~---G~~V~v~-dr-~~~~~~~l~~~~~~~~~~----------------~~~~~--~s~ 64 (474)
.||||+|.|.+|+.+.+.|.++ .++|... |+ +++....+.+.....|.+ .+... .++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 3799999999999999999876 3677644 54 455555444221111000 11121 144
Q ss_pred HHH-HhhcCCCcEEEEecCCChhHHHHHHHHHhcccCCC--EEEecCC
Q 011931 65 ESF-VNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGD--CIIDGGN 109 (474)
Q Consensus 65 ~e~-~~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~--iiId~st 109 (474)
+++ ... ..+|+||.|+|.....+ ... .+++.|. +|||.+.
T Consensus 81 ~~l~w~~-~~vDvV~~atg~~~s~e-~a~---~~l~aGakkvVId~~a 123 (332)
T 1hdg_O 81 SKLPWKD-LGVDFVIESTGVFRNRE-KAE---LHLQAGAKKVIITAPA 123 (332)
T ss_dssp GGSCHHH-HTCCEEEECSSSCCBHH-HHT---HHHHTTCSEEEESSCC
T ss_pred HHCcccc-cCCCEEEECCccchhHH-HHH---HHHHcCCcEEEEeCCC
Confidence 443 110 02888888888774433 222 2344566 8888765
No 497
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.71 E-value=0.21 Score=46.41 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=53.9
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEEecCCChh
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAP 86 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil~vp~~~~ 86 (474)
+++-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+.. . ...+..=+.+...
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------------~---~~~~~~D~~~~~~ 63 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------------------G---AHPVVMDVADPAS 63 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------------------T---CEEEECCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------------------C---CEEEEecCCCHHH
Confidence 3566676 789999999999999999999999988766554311 0 1222222334445
Q ss_pred HHHHHHHHHhcccCCCEEEecCCC
Q 011931 87 VDETIKTLSAYMEKGDCIIDGGNE 110 (474)
Q Consensus 87 v~~vl~~l~~~l~~g~iiId~st~ 110 (474)
++.+++++.....+=+++|++...
T Consensus 64 ~~~~~~~~~~~~g~id~lvn~Ag~ 87 (245)
T 1uls_A 64 VERGFAEALAHLGRLDGVVHYAGI 87 (245)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 666666665555555777776653
No 498
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.71 E-value=0.05 Score=53.40 Aligned_cols=95 Identities=11% Similarity=0.188 Sum_probs=58.8
Q ss_pred CcEEEEcccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccc-cCCHHHHHhh-cCCCcEEEEecCCCh
Q 011931 8 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFG-FRDPESFVNS-IQKPRVIIMLVKAGA 85 (474)
Q Consensus 8 ~~IgiIGlG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~-~~s~~e~~~~-l~~~dvIil~vp~~~ 85 (474)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.+... -+.. ..+..+.+.. ....|+||.++..+.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~---~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~ 244 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEV---AVNARDTDPAAWLQKEIGGAHGVLVTAVSPK 244 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE---EEETTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCE---EEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH
Confidence 4699999999999999888889999999999999988776654321 0000 1122222211 113677777765443
Q ss_pred hHHHHHHHHHhcccCCCEEEecCC
Q 011931 86 PVDETIKTLSAYMEKGDCIIDGGN 109 (474)
Q Consensus 86 ~v~~vl~~l~~~l~~g~iiId~st 109 (474)
. ++.....+.++..++..+.
T Consensus 245 ~----~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 245 A----FSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp H----HHHHHHHEEEEEEEEECSC
T ss_pred H----HHHHHHHhccCCEEEEeCC
Confidence 2 3333444555555555543
No 499
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=94.71 E-value=0.14 Score=47.95 Aligned_cols=84 Identities=11% Similarity=0.171 Sum_probs=54.3
Q ss_pred CcEEEEc-ccHhHHHHHHHHHHCCCcEEEEeCChHHHHHHHHhhhhcCCCCccccCCHHHHHhhcCCCcEEEE--ecCCC
Q 011931 8 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIM--LVKAG 84 (474)
Q Consensus 8 ~~IgiIG-lG~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~~s~~e~~~~l~~~dvIil--~vp~~ 84 (474)
++|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+.... .. .++.++ =+.+.
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------------~~---~~~~~~~~D~~~~ 70 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS----------------KG---FKVEASVCDLSSR 70 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------------TT---CEEEEEECCTTCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------------cC---CcEEEEEcCCCCH
Confidence 3466666 78999999999999999999999998877665443210 01 222222 23333
Q ss_pred hhHHHHHHHHHhcc-cCCCEEEecCCC
Q 011931 85 APVDETIKTLSAYM-EKGDCIIDGGNE 110 (474)
Q Consensus 85 ~~v~~vl~~l~~~l-~~g~iiId~st~ 110 (474)
..++.+++.+.... .+=+++|++...
T Consensus 71 ~~~~~~~~~~~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 71 SERQELMNTVANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHHHHHHHHHHHTTTCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCCEEEECCCC
Confidence 45666666666555 445777776653
No 500
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.71 E-value=0.072 Score=52.26 Aligned_cols=98 Identities=12% Similarity=0.124 Sum_probs=54.5
Q ss_pred cCcEEEEcccHhHHHHHHHHHHCC-CcEEEE-eC-ChHHHHHHHHhhhhcCCC---------Cc-------cc--cCCHH
Q 011931 7 LTRIGLAGLAVMGQNLALNIAEKG-FPISVY-NR-TTSKVDETVERAKKEGDL---------PL-------FG--FRDPE 65 (474)
Q Consensus 7 ~~~IgiIGlG~mG~~lA~~L~~~G-~~V~v~-dr-~~~~~~~l~~~~~~~~~~---------~~-------~~--~~s~~ 65 (474)
|.||||+|.|.+|+.+.+.|.++. .+|... |+ +++....+.+.....+.+ .+ .. ..+++
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA 80 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCChh
Confidence 358999999999999999998764 466544 54 344444333321100000 01 01 12344
Q ss_pred HHH---hhcCCCcEEEEecCCChhHHHHHHHHHhcccCCCEEEecCCCC
Q 011931 66 SFV---NSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEW 111 (474)
Q Consensus 66 e~~---~~l~~~dvIil~vp~~~~v~~vl~~l~~~l~~g~iiId~st~~ 111 (474)
++- .. +|+||.|+|.....+ ... .+++.|..+||.|.-.
T Consensus 81 ~i~w~~~~---vDvVf~atg~~~s~e-~a~---~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 81 NLKWDEVG---VDVVAEATGLFLTDE-TAR---KHITAGAKKVVMTGPS 122 (330)
T ss_dssp GGCHHHHT---CSEEEECSSSCCSHH-HHT---HHHHTTCSEEEESSCC
T ss_pred hCcccccc---CCEEEECCCccccHH-HHH---HHHHCCCEEEEECCCC
Confidence 321 23 788888888764332 222 2345677777776654
Done!