BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011935
(474 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
Length = 449
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 117/191 (61%), Gaps = 9/191 (4%)
Query: 207 HPST---FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
HP + ++ ++ +K+MI DD+ FLR ++Y G ++RGYLLYGPPG+GK+S +
Sbjct: 200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFL 259
Query: 264 AAMANYLRFDIYDLELTSIYSNSD-LRRILLSTTNRSILVIEDVDCSVEMKDRQNDGASV 322
A+A L +DI L L D L +L + ++++++EDVD + + ++R + V
Sbjct: 260 YALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRERSGE---V 316
Query: 323 GSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVH 382
G + +T SG+LN +DG+ SS DERII TTNH E++DPAL+RPGR+DV + T
Sbjct: 317 GFHANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPE 374
Query: 383 GFKVLASNYLG 393
+ + + + G
Sbjct: 375 QVREMFTRFYG 385
>sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum
GN=bcsl1b PE=3 SV=1
Length = 458
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 30/204 (14%)
Query: 207 HPS---TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
HP ++ +D ++I+ D+ +FL ++Y G ++RGYLLYGPPGTGKSS I
Sbjct: 199 HPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFI 258
Query: 264 AAMANYLRFDIYDLELTS-IYSNSDLRRILLSTTNRSILVIEDVDCSVE-------MKDR 315
A+A L+ I L L S++ L ++L + RSI+++ED+D +++ K
Sbjct: 259 TALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSN 318
Query: 316 QNDGASVGS-----------------NTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKE 358
+ S+ S + LT SG+LN +DG+ +S G RI+ TTNH E
Sbjct: 319 SANAPSISSGGLQYQGYYGNPSVSSGGSALTFSGLLNALDGVAASEG--RILFMTTNHLE 376
Query: 359 RIDPALLRPGRMDVHINMSYCTVH 382
++D L+RPGR+D+ I + C+ +
Sbjct: 377 KLDKVLIRPGRVDLQIEIGLCSSY 400
>sp|Q7ZTL7|BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1
Length = 419
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 104/173 (60%), Gaps = 6/173 (3%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
++ ++ + + I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 188 LSSVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 271 RFDI-YDLELTSIYSNSDLRRILLSTTNRSILVIEDVDCSVEMKD--RQNDGASVGSNTK 327
+ I S S+ L +L +SI+++EDVD + +D +QN A G +
Sbjct: 248 EYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRDLNKQNPTAYQGMG-R 306
Query: 328 LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCT 380
LT SG+LN +DG+ S+ + RI+ TTNH +R+DPAL+RPGR+DV + +CT
Sbjct: 307 LTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHCT 357
>sp|Q7ZV60|BCS1_DANRE Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2
Length = 420
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 123/225 (54%), Gaps = 9/225 (4%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
++ ++ + + I+DD+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 188 LSSVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 271 RFDIYDLELTS-IYSNSDLRRILLSTTNRSILVIEDVDC---SVEMKDRQNDGASVGSNT 326
+ I + L+ S+ L +L +SI+++EDVD S E+ +N A G
Sbjct: 248 GYSICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRELLPTENPLAYQGMG- 306
Query: 327 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKV 386
+LT SG+LN +DG+ SS + RI+ TTN ER+DPAL+RPGR+D+ + +C+
Sbjct: 307 RLTFSGLLNALDGVASS--EARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHWQLTQ 364
Query: 387 LASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELM--KADDA 429
+ + + + + + L TD++ A+V M K D A
Sbjct: 365 MFRRFYPQESAAEADHFSEQALAAHTDLSAAQVQGHFMLYKTDPA 409
>sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
Length = 456
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 107/171 (62%), Gaps = 6/171 (3%)
Query: 213 TLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLRF 272
++ +D +K+ ILDD+ F++ ++Y G ++RGYLLYGPPG+GK+S I A+A L +
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 273 DIYDLELTSIYSNSD-LRRILLSTTNRSILVIEDVDCSVEMKDRQNDGASVGSNTKLTLS 331
+I L L+ D L ++ + RSIL++ED+D + ++++ G ++ +T S
Sbjct: 287 NICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAF---NKRSQTGEQGFHSSVTFS 343
Query: 332 GILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVH 382
G+LN +DG+ SS +E I TTNH E++D A++RPGR+D + + T +
Sbjct: 344 GLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPY 392
>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum
GN=bcs1la PE=3 SV=1
Length = 421
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 19/246 (7%)
Query: 195 GGGGMWGSI-NLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYG 253
GG G W N + ++ + +LK +++D+ F+ + +YR G ++RGYLLYG
Sbjct: 169 GGNGNWERFGNPRSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYG 228
Query: 254 PPGTGKSSLIAAMANYLRFDIYDLELTSI-YSNSDLRRILLSTTNRSILVIEDVDCSVEM 312
PG GKSSLI A+A L DI + L+S + + +L + +SIL+IED+D + +
Sbjct: 229 EPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKS 288
Query: 313 KDRQND--GASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRM 370
D + +N LT SG+LN +DG+ S G RI+ TTN E +D AL+R GR+
Sbjct: 289 HRDNVDSNNNNSNNNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRI 346
Query: 371 DVHINMSYCT--------VHGFKVLASNYLGIKGK----SHSL-FGEIEGLIQSTDVTPA 417
D+ I +S T H + + N L I+ H L +I+G + +P
Sbjct: 347 DLKIKVSNATKSQAAQLFTHFYNLPTDNQLAIRFSENLHDHQLSMSQIQGFLLKYINSPE 406
Query: 418 EVAEEL 423
+ EE+
Sbjct: 407 KAIEEV 412
>sp|Q9Y276|BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1
Length = 419
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 119/218 (54%), Gaps = 8/218 (3%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
+++ + L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 188 LNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 271 RFDI-YDLELTSIYSNSDLRRILLSTTNRSILVIEDVDCSVEMKDRQ-NDGASVGSNTKL 328
I S S+ L +L +S++++EDVD + +D + +L
Sbjct: 248 EHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRL 307
Query: 329 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLA 388
T SG+LN +DG+ S+ + RI+ TTNH +R+DPAL+RPGR+D+ + YC+ +
Sbjct: 308 TFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMF 365
Query: 389 SNYLGIKGKSHSLFGEI-EGLIQSTD-VTPAEVAEELM 424
+ G++ SL E ++++T+ ++PA+V M
Sbjct: 366 QRF--YPGQAPSLAENFAEHVLRATNQISPAQVQGYFM 401
>sp|Q9CZP5|BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1
Length = 418
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 10/219 (4%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
D++ + L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 188 LDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 271 RFDI-YDLELTSIYSNSDLRRILLSTTNRSILVIEDVDCSVEMKDRQ-NDGASVGSNTKL 328
I S S+ L +L +S++++EDVD + +D + +L
Sbjct: 248 EHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPIKYQGLGRL 307
Query: 329 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLA 388
T SG+LN +DG+ S+ + RI+ TTN+ +R+DPAL+RPGR+D+ + YC+ +
Sbjct: 308 TFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMF 365
Query: 389 SNYLGIKGKSHSL---FGEIEGLIQSTDVTPAEVAEELM 424
+ G++ SL F E L +++++PA+V M
Sbjct: 366 QRFY--PGQAPSLAENFAE-HVLKATSEISPAQVQGYFM 401
>sp|Q5E9H5|BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1
Length = 419
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 10/219 (4%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
+++ ++ + + I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 188 LNSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 271 RFDI-YDLELTSIYSNSDLRRILLSTTNRSILVIEDVDCSVEMKDRQNDGA-SVGSNTKL 328
+ I S S+ L +L +S++++EDVD + +D + +L
Sbjct: 248 QHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAENPIKYQGLGRL 307
Query: 329 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLA 388
T SG+LN +DG+ S+ + RI+ TTNH +R+DPAL+RPGR+D+ + +C+ +
Sbjct: 308 TFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMF 365
Query: 389 SNYLGIKGKSHSL---FGEIEGLIQSTDVTPAEVAEELM 424
+ G++ SL F + L +T ++PA+V M
Sbjct: 366 QRFY--PGQATSLAENFAD-RVLQATTQISPAQVQGYFM 401
>sp|P71408|FTSH_HELPY ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ftsH PE=1 SV=2
Length = 632
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 196 GGGMWGS------INLEHPST-FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRG 248
GGG++G IN E P+ F+ +A + E K+ +++ +D FL+ E Y +G +G
Sbjct: 147 GGGIFGMGSAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKG 205
Query: 249 YLLYGPPGTGKSSLIAAMANYLRFDIYDLELTSIYS-----NSDLRRILLSTTNR---SI 300
LL GPPGTGK+ L A+A + + +S + R L T + SI
Sbjct: 206 VLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSI 265
Query: 301 LVIEDVDCSVEMKDRQNDGASVGSNTK-LTLSGILNFIDGLWSSCGDERIIVFTTNHKER 359
+ I+++D K R G G++ + TL+ +L +DG S I++ TN E
Sbjct: 266 IFIDEIDAI--GKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEI 322
Query: 360 IDPALLRPGRMDVHINMSYCTVHG-FKVLASNYLGIK 395
+DPAL+RPGR D + + +G ++L + G+K
Sbjct: 323 LDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVK 359
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 18/199 (9%)
Query: 208 PSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
P+TF+ +A E + + +D FL+ E Y+ +G +G LL GPPGTGK+ L A+A
Sbjct: 247 PTTFEDVAGIEEAVDEVREVVD-FLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKAIA 305
Query: 268 NYLRFDIYDL------ELTSIYSNSDLRRILLSTTNRS--ILVIEDVDCSVEMKDRQNDG 319
+ L E+ + +R + NR+ I+ I+++D + G
Sbjct: 306 GEAGVPFFSLSGSDFVEMFVGVGAARVRDMFTQAVNRAPCIIFIDELDA----LGKSRSG 361
Query: 320 ASVGSN--TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMS 377
+ VG + + TL+ +L +DG S+ G I+V TN E +DPALLRPGR D H+ +
Sbjct: 362 SVVGGHDEREQTLNALLVEMDGFDSNSG--VIVVAATNRPETLDPALLRPGRFDRHVLVD 419
Query: 378 YCTVHGF-KVLASNYLGIK 395
V G ++LA + +K
Sbjct: 420 RPDVAGREEILAVHVKNVK 438
>sp|Q9ZM66|FTSH_HELPJ ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain J99) GN=ftsH PE=3 SV=1
Length = 632
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 196 GGGMWGS------INLEHPST-FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRG 248
GGG++G IN E P+ F+ +A + E K+ +++ +D FL+ E Y +G +G
Sbjct: 147 GGGIFGMGSAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKG 205
Query: 249 YLLYGPPGTGKSSLIAAMANYLRFDIYDLELTSIYS-----NSDLRRILLSTTNR---SI 300
LL GPPGTGK+ L A+A + + +S + R L T + SI
Sbjct: 206 VLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSI 265
Query: 301 LVIEDVDCSVEMKDRQNDGASVGSNTK-LTLSGILNFIDGLWSSCGDERIIVFTTNHKER 359
+ I+++D K R G G++ + TL+ +L +DG S I++ TN E
Sbjct: 266 IFIDEIDAI--GKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEI 322
Query: 360 IDPALLRPGRMDVHINMSYCTVHG-FKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAE 418
+DPAL+RPGR D + + +G ++L K H I+G+ + DV E
Sbjct: 323 LDPALMRPGRFDRQVLVDKPDFNGRVEIL---------KVH-----IKGVKLANDVNLQE 368
Query: 419 VAEELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANE 462
VA+ AD+A N + + A + +VK + E
Sbjct: 369 VAKLTAGLAGADLA-----NIINEAALLAGRNNQKEVKQQHLKE 407
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN--- 268
D +D ++++ I + +++ L+ E + +VG +G LLYGPPGTGK+ L A+AN
Sbjct: 180 DIGGLDEQIRE-IREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHAD 238
Query: 269 --YLRFDIYDLELTSIYSNSDLRRILLSTTNR---SILVIEDVDCSVEMKDRQNDGASVG 323
++R +L I + L R L SI+ I+++D R D S
Sbjct: 239 ATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAI--GARRMRDATSGD 296
Query: 324 SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHG 383
+ TL+ +L +DG + D ++I TN K+ +DPALLRPGR D HI + G
Sbjct: 297 REVQRTLTQLLAEMDG-FDPLDDIKVIA-ATNRKDILDPALLRPGRFDRHIKIPLPDEEG 354
>sp|Q9HGM3|YTA12_SCHPO Mitochondrial respiratory chain complexes assembly protein rca1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yta12 PE=3 SV=1
Length = 773
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMA 267
F +A E K+ I++ + +FL+ +FY R+G RG +L GPPGTGK+ L A A
Sbjct: 295 FADVAGVDEAKEEIMEFV-KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEA 353
Query: 268 NYLRFDIYDLELTSIYSNSDLRRI--LLSTTNRS---ILVIEDVDCSVEMKDRQNDGASV 322
N + E ++ R+ L +T ++ I+ I+++D + + R G
Sbjct: 354 NVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGR---GGQF 410
Query: 323 GSNTKL--TLSGILNFIDGLWSSCGDERIIVFT-TNHKERIDPALLRPGRMDVHINMSYC 379
GSN + TL+ +L +DG SS E I+VF TN + +DPALLRPGR D I +
Sbjct: 411 GSNDERESTLNQLLVEMDGFTSS---EHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRP 467
Query: 380 TVHG----FKV 386
+ G FKV
Sbjct: 468 DIGGREQIFKV 478
>sp|Q5UR45|YL572_MIMIV Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L572 PE=3 SV=1
Length = 196
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 32/188 (17%)
Query: 262 LIAAMANYLRFDIYDLELTSIYSNSDLRRILLSTTNR-SILVIEDVDCSVE--------- 311
+I A++ + + I+ L L +I +++L +L + + +ILV+ED+DC+ E
Sbjct: 1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEE 60
Query: 312 --MKDRQNDGASVGSN-------------TKLTLSGILNFIDGLWSSCGDERIIVFTTNH 356
+ ++ D S N +KLTLSGILN +DG+++S G RI++ TTNH
Sbjct: 61 ETVVEKVTDDKSTLENKILADQLKKVEKVSKLTLSGILNSLDGIFNSEG--RIVIMTTNH 118
Query: 357 KERIDPALLRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTP 416
E +DPAL+R GR+D+ I S C + + N+ G S +I I S +P
Sbjct: 119 SEVLDPALIRRGRIDMQIEFSNCDRYQIAKMYENFYGKNADS-----DILSKIPSDIYSP 173
Query: 417 AEVAEELM 424
A V+ L+
Sbjct: 174 AHVSGLLL 181
>sp|O34703|YJOB_BACSU Uncharacterized ATPase YjoB OS=Bacillus subtilis (strain 168)
GN=yjoB PE=1 SV=1
Length = 423
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 31/189 (16%)
Query: 214 LAMDPELKQMILDDLDRFLRR-KEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLRF 272
+ M+P LK+ I +D+F K FY+ +KRG LLYGPPG GK++L+ ++A +
Sbjct: 187 VIMNPLLKKEIYRSIDQFFHSDKSFYQTYDIPYKRGILLYGPPGNGKTTLVKSIAGSIDA 246
Query: 273 DIYDLELTSIYSNSDLRRILLSTTN--RSILVIEDVDCSVEMKDRQNDGASVGSNTKLTL 330
+ ++T S+ + + + ++LVIED+D E
Sbjct: 247 PVAYWQITEFTSSETIEEVFQAARRLAPAVLVIEDIDSMPED----------------VR 290
Query: 331 SGILNFIDGLWSSCGDERIIVFTTNHKERIDPALL-RPGRM---------DVHINMSYCT 380
S LN +DG S G ++ TTN+ E IDP L+ R GR D + + Y
Sbjct: 291 SFFLNTLDGATSKEG--LFLIGTTNYPEEIDPGLMNRAGRFDRAYEIGLPDEELRLEYMK 348
Query: 381 VHGFKVLAS 389
+ GF + S
Sbjct: 349 MRGFGIFLS 357
>sp|D1C2C6|FTSH2_SPHTD ATP-dependent zinc metalloprotease FtsH 2 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH2 PE=3
SV=1
Length = 652
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E+K+ + D +D +LR E +RR+G RG LL GPPGTGK+ L A+A
Sbjct: 158 TFDDVAGAEEVKEEVADIVD-YLRDPERFRRLGARIPRGVLLTGPPGTGKTLLTRALAGE 216
Query: 270 LR---FDIYDLELTSIYSNSDLRRIL-----LSTTNRSILVIEDVDCSVEMKDRQNDGAS 321
R F + E +Y R+ +I+ I+++D + R
Sbjct: 217 ARASFFSVSGSEFVELYVGVGASRVRELFRKAKENAPAIIFIDEIDAIGRRRGRMEQ--- 273
Query: 322 VGSNTKLTLSGILNFIDGLWSSCGDER---IIVFTTNHKERIDPALLRPGRMD 371
S TL+ IL +DG +ER ++V TN + +DPALLRPGR D
Sbjct: 274 -SSEYDQTLNQILVEMDGF-----EERTTVVVVAATNRVDILDPALLRPGRFD 320
>sp|O32617|FTSH_HELFC ATP-dependent zinc metalloprotease FtsH OS=Helicobacter felis
(strain ATCC 49179 / NCTC 12436 / CS1) GN=ftsH PE=3 SV=1
Length = 638
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 193 GGGGGGMWGS---INLEHPST-FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRG 248
GGG GM S IN E P F+ +A + E K+ +++ +D FL+ + Y +G +G
Sbjct: 153 GGGIFGMGSSKKLINAEKPKVRFNDMAGNEEAKEEVVEIVD-FLKYPDRYASLGAKIPKG 211
Query: 249 YLLYGPPGTGKSSLIAAMANYLRFDIYDLELTSIYS-----NSDLRRILLSTTNR---SI 300
LL GPPGTGK+ L A+A + + +S + R L + SI
Sbjct: 212 VLLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSI 271
Query: 301 LVIEDVDCSVEMKDRQNDGASVGSNTK-LTLSGILNFIDGLWSSCGDERIIVFTTNHKER 359
+ I+++D K R G G++ + TL+ +L +DG S I++ TN E
Sbjct: 272 IFIDEIDAI--GKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENA-PVIVLAATNRPEI 328
Query: 360 IDPALLRPGRMDVHI 374
+DPALLRPGR D +
Sbjct: 329 LDPALLRPGRFDRQV 343
>sp|Q2SF13|FTSH_HAHCH ATP-dependent zinc metalloprotease FtsH OS=Hahella chejuensis
(strain KCTC 2396) GN=ftsH PE=3 SV=1
Length = 619
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 209 STFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
+TFD +A K+ + +L +LR + + RVG RG LL GPPGTGK+ L A+A
Sbjct: 173 TTFDEVAGQTNAKREV-QELVEYLRDPDRFHRVGALAPRGVLLMGPPGTGKTLLARALAG 231
Query: 269 YLRFDIYDL---ELTSIYSNSDLRRI-----LLSTTNRSILVIEDVDCSVEMKDRQNDGA 320
+ Y + E ++ R+ + + SI+ I+++D + GA
Sbjct: 232 EAGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDSVGRTR-----GA 286
Query: 321 SVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINM 376
G + TL+ IL +DG + D I++ TN + +DPAL+RPGR D H+ +
Sbjct: 287 GYGGGHDEREQTLNQILAEMDGF--AGHDAVIVLAATNRPDVLDPALMRPGRFDRHVTL 343
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 43/257 (16%)
Query: 225 LDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLRFDIYDLELTS 281
L ++ FL+ E ++++G +G LL GPPGTGK+ L +A A+ F + E
Sbjct: 209 LQEIVDFLKTPEKFQKLGGQVPKGVLLNGPPGTGKTLLARAVAGEADVPFFSVNGSEFIQ 268
Query: 282 IYSNSDLRRI--LLSTTNR---SILVIEDVDCSVEMKDRQNDGASVGSN---TKLTLSGI 333
++ R+ L T SI+ I+++D RQ GA +G + TL+ I
Sbjct: 269 MFVGVGASRVRDLFKTAKEQSPSIIFIDEIDAV----GRQR-GAGLGGGHDEREQTLNQI 323
Query: 334 LNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHG----FKV--- 386
L +DG + I++ TN + +DPALLRPGR D H+ + T+ G FKV
Sbjct: 324 LGEMDGFGGAQA--VIVIAATNRPDVLDPALLRPGRFDRHVTVGRPTMKGREEIFKVHVR 381
Query: 387 ------------LASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALE 434
LA+ +G+ G +I ++ + A +++++ D D A +
Sbjct: 382 DVPLGDDVDLHRLAAGTVGLTG------ADIRNMVNEAALWAARGDKKIVEMSDFDYARD 435
Query: 435 GLVNFLKRKRIQADESK 451
++ KR+ + + K
Sbjct: 436 KILMGAKREEVLLESEK 452
>sp|Q8SQI9|PRS6B_ENCCU 26S protease regulatory subunit 6B homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU08_1970 PE=1 SV=1
Length = 387
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 221 KQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLR---FDIYDL 277
KQ I + ++ L + + YR++G +G LLYGPPGTGK+ L+ A+AN+ + +
Sbjct: 143 KQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGS 202
Query: 278 ELTSIYSNSDLRRI-----LLSTTNRSILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSG 332
E Y R + L SI+ I++VD S+ K R + S + L
Sbjct: 203 EFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVD-SIATK-RFDASTSADREVQRVLIE 260
Query: 333 ILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
+LN +DG + + ++ TN + IDPALLRPGR+D I
Sbjct: 261 LLNQMDGFDPAANVK--VIMATNRADTIDPALLRPGRLDRKI 300
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 266
TFD +A E K+ L ++ FL+ E + +G RG LL GPPGTGK+ L +A
Sbjct: 161 TFDDVAGVDEAKEE-LQEIVEFLKYPEKFAALGARIPRGVLLVGPPGTGKTLLSRAVAGE 219
Query: 267 ANYLRFDIYDLELTSIYSNSDLRRI--LLSTTNRS---ILVIEDVDCSVEMKDRQNDGAS 321
A F I E ++ R+ L R+ I+ I+++D RQ GA
Sbjct: 220 AGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAV----GRQR-GAG 274
Query: 322 VGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSY 378
+G + + TL+ IL +DG SS I++ TN + +DPALLRPGR D + +
Sbjct: 275 LGGSHDEREQTLNQILVEMDGFDSST--NVIVIAATNRPDVLDPALLRPGRFDRQVVLDR 332
Query: 379 CTVHG 383
+HG
Sbjct: 333 PDLHG 337
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 126/277 (45%), Gaps = 34/277 (12%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMA 267
FD +A E K+ L ++ FL++ E + +G RG LL GPPGTGK+ L IA A
Sbjct: 210 FDDVAGIDEAKEE-LQEVVTFLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAGEA 268
Query: 268 NYLRFDIYDLELTSIYSNSDLRRIL----LSTTNRSILV-IEDVDCSVEMKDRQNDGASV 322
F I E ++ R+ + N LV I+++D RQ
Sbjct: 269 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAV----GRQRGVGYG 324
Query: 323 GSN--TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCT 380
G N + TL+ +L +DG + G I++ TN + +D ALLRPGR D + + Y
Sbjct: 325 GGNDEREQTLNQLLTEMDGFEGNSGI--IVIAATNRPDVLDLALLRPGRFDRQVTVDYPD 382
Query: 381 VHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLVNFL 440
V G +++ L I ++ L E++ L TP AD A+V E + F
Sbjct: 383 VQGRELI----LAIHAQNKKLHEEVQ-LAAIARRTPG-----FTGADLANVLNEAAI-FT 431
Query: 441 KRKRIQA------DESKNNDVKGEEANEVEHEKAKQL 471
R+R +A +++ + V G E + K+K+L
Sbjct: 432 ARRRKEAITMAEVNDAIDRVVAGMEGTPLVDSKSKRL 468
>sp|P73437|FTSH4_SYNY3 ATP-dependent zinc metalloprotease FtsH 4 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH4 PE=2 SV=1
Length = 628
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 10/186 (5%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E K + + +D FL+ + Y +G +G LL GPPGTGK+ L A A
Sbjct: 172 TFDDVAGVEEAKTELSEVVD-FLKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAKAAAGE 230
Query: 270 LR---FDIYDLELTSIYSNSDLRRI--LLSTTNRSILVIEDVDCSVEMKDRQNDGASVGS 324
F I E ++ + R+ L + I +D + + GA +G
Sbjct: 231 AGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAFMGG 290
Query: 325 N--TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVH 382
N + TL+ +L +DG +S+ G I++ TN E +DPALLRPGR D + + +
Sbjct: 291 NDEREQTLNQLLTEMDG-FSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLA 349
Query: 383 G-FKVL 387
G K+L
Sbjct: 350 GRLKIL 355
>sp|O59824|YME1_SCHPO ATP-dependent zinc metalloprotease YME1 homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC965.04c PE=3 SV=1
Length = 709
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 225 LDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLRFDIYDLELTS 281
L+++ FLR + R+G RG LL GPPGTGK+ L +A AN F + +
Sbjct: 279 LEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDE 338
Query: 282 IYSNSDLRRI--LLSTTNR---SILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSGILNF 336
+Y +R+ L + + SI+ I+++D + K D A + + TL+ +L
Sbjct: 339 MYVGVGAKRVRELFAAARKQAPSIIFIDELDA-IGQKRNARDAA----HMRQTLNQLLVD 393
Query: 337 IDGLWSSCGDERIIVF--TTNHKERIDPALLRPGRMDVHINMSYCTVHG 383
+DG + +VF TN E +DPAL RPGR D HI++ V G
Sbjct: 394 LDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRG 442
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLR---FDIY 275
E KQ I + ++ +R E ++R+G +G LLYGPPGTGK+ L A+AN + +
Sbjct: 219 EAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVN 278
Query: 276 DLELTSIY---SNSDLRRILLSTTNR--SILVIEDVDCSVEMKDRQNDGASVGSNTKLTL 330
E+ S + S +R I SI+ I+++D + ++ D G K +
Sbjct: 279 GPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDA---IAPKRED--VTGEVEKRVV 333
Query: 331 SGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 385
+ +L +DG+ G R+IV TN + IDPAL RPGR D I + G K
Sbjct: 334 AQLLTLMDGI---KGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRK 386
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 220 LKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAM-----ANYLRFDI 274
+KQ + + ++ LR E + + G +G LL+GPPGTGK+ L A+ AN++ +
Sbjct: 495 VKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIA--V 552
Query: 275 YDLELTSIY---SNSDLRRILLSTTNRSILVI--EDVDCSVEMKDRQNDGASVGSNTKLT 329
E+ S + S +R I + VI +++D ++ D T+
Sbjct: 553 RGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGV----TERI 608
Query: 330 LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 371
++ +L +DG+ ++ +I+ TN + +DPALLRPGR D
Sbjct: 609 VNQLLAEMDGIVPL--NKVVIIAATNRPDILDPALLRPGRFD 648
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLR---FDIYDLE 278
+++ + ++ L+ E ++R+G +G LLYGPPGTGK+ + A+AN + I E
Sbjct: 192 RLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPE 251
Query: 279 LTSIY---SNSDLRRILLSTTNR--SILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSGI 333
+ S Y S LR I SI+ I+++D ++ G + ++ +
Sbjct: 252 IMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVT-----GEVERRVVAQL 306
Query: 334 LNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 385
L +DGL + GD I++ TN + IDPAL RPGR D I + G K
Sbjct: 307 LALMDGL-EARGD-VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRK 356
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 221 KQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLRFDIYDL--- 277
KQ +++ ++ L+ E +R RG LL+GPPGTGK+ L A+AN + +
Sbjct: 464 KQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGP 523
Query: 278 ELTSIY---SNSDLRRILLSTTNRSILVI--EDVDCSVEMKDRQNDGASVGSNTKLTLSG 332
EL S + S +R + + VI +++D + R+ G T+ +S
Sbjct: 524 ELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDS---LAPRRG-GIGDSHVTERVVSQ 579
Query: 333 ILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
+L +DGL + +++ TN + IDPALLRPGR++ HI
Sbjct: 580 LLTELDGLEEL--KDVVVIAATNRPDMIDPALLRPGRLERHI 619
>sp|P39925|AFG3_YEAST Mitochondrial respiratory chain complexes assembly protein AFG3
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=AFG3 PE=1 SV=1
Length = 761
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 15/184 (8%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAM--- 266
+F +A E KQ I++ + FL+ Y ++G RG +L GPPGTGK+ L A
Sbjct: 286 SFKNVAGCDEAKQEIMEFV-HFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344
Query: 267 ANYLRFDIYDLELTSIYSNSDLRRIL-LSTTNR----SILVIEDVDCSVEMKDRQNDGAS 321
AN + E ++ R+ L T R SI+ I+++D K+R GA
Sbjct: 345 ANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAI--GKERGKGGAL 402
Query: 322 VGSN--TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYC 379
G+N + TL+ +L +DG +S D+ +++ TN + +D AL+RPGR D HI +
Sbjct: 403 GGANDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSP 460
Query: 380 TVHG 383
V+G
Sbjct: 461 DVNG 464
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLRFDIYD 276
Q I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN +LR +
Sbjct: 194 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 253
Query: 277 LELTSIYSNSDLRRILLSTTNR---SILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSGI 333
L + L R L SI+ I+++D + N G + T+ +
Sbjct: 254 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE--REIQRTMLEL 311
Query: 334 LNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
LN +DG + S GD ++I TN E +DPAL+RPGR+D I
Sbjct: 312 LNQLDG-FDSRGDVKVI-MATNRIETLDPALIRPGRIDRKI 350
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLRFDIYD 276
Q I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN +LR +
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 277 LELTSIYSNSDLRRILLSTTNR---SILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSGI 333
L + L R L SI+ I+++D + N G + T+ +
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGE--REIQRTMLEL 312
Query: 334 LNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
LN +DG + S GD ++I TN E +DPAL+RPGR+D I
Sbjct: 313 LNQLDG-FDSRGDVKVI-MATNRIETLDPALIRPGRIDRKI 351
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 266
TFD +A E KQ ++ ++ FL++ E + VG +G LL GPPGTGK+ L IA
Sbjct: 225 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 267 ANYLRFDIYDLELTSIYSNSDLRRI--LLSTTNRSILVIEDVDCSVEMKDRQNDGASVGS 324
A F I E ++ R+ L + I VD ++ RQ G
Sbjct: 284 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD-EIDAVGRQRGTGIGGG 342
Query: 325 N--TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVH 382
N + TL+ +L +DG + G I+V TN + +D ALLRPGR D +++ V
Sbjct: 343 NDEREQTLNQLLTEMDGFEGNTG--VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVK 400
Query: 383 G----FKVLASN 390
G KV A N
Sbjct: 401 GRTDILKVHAGN 412
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLRFDIYD 276
Q I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN +LR +
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 277 LELTSIYSNSDLRRILLSTTNR---SILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSGI 333
L + L R L SI+ I+++D + N G + T+ +
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE--REIQRTMLEL 312
Query: 334 LNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
LN +DG + S GD ++I TN E +DPAL+RPGR+D I
Sbjct: 313 LNQLDG-FDSRGDVKVI-MATNRIETLDPALIRPGRIDRKI 351
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLRFDIYD 276
Q I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN +LR +
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 277 LELTSIYSNSDLRRILLSTTNR---SILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSGI 333
L + L R L SI+ I+++D + N G + T+ +
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE--REIQRTMLEL 312
Query: 334 LNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
LN +DG + S GD ++I TN E +DPAL+RPGR+D I
Sbjct: 313 LNQLDG-FDSRGDVKVI-MATNRIETLDPALIRPGRIDRKI 351
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLRFDIYD 276
Q I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN +LR +
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 277 LELTSIYSNSDLRRILLSTTNR---SILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSGI 333
L + L R L SI+ I+++D + N G + T+ +
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE--REIQRTMLEL 312
Query: 334 LNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
LN +DG + S GD ++I TN E +DPAL+RPGR+D I
Sbjct: 313 LNQLDG-FDSRGDVKVI-MATNRIETLDPALIRPGRIDRKI 351
>sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana
GN=RPT3 PE=1 SV=1
Length = 408
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 221 KQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLR---FDIYDL 277
KQ I + ++ L E Y+++G RG LLYGPPGTGK+ L A+AN+ +
Sbjct: 164 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGS 223
Query: 278 ELTSIYSNSDLRRI-----LLSTTNRSILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSG 332
E Y R + L +I+ I++VD + GA + L
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGAD--REVQRILME 281
Query: 333 ILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
+LN +DG + + ++ TN + +DPALLRPGR+D I
Sbjct: 282 LLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLDRKI 321
>sp|B1ZMG6|FTSH_OPITP ATP-dependent zinc metalloprotease FtsH OS=Opitutus terrae (strain
DSM 11246 / PB90-1) GN=ftsH PE=3 SV=1
Length = 614
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
+F ++A E K + + ++ FLR +R+ G +G LL GPPGTGK+ L A+A
Sbjct: 172 SFSSVAGCDEAKDEVYEVVE-FLRDPARFRQTGGRMPKGVLLVGPPGTGKTMLAKAVAGE 230
Query: 270 LRFDIYDL------ELTSIYSNSDLRRILLST--TNRSILVIEDVDCSVEMKDRQNDGAS 321
R + Y L EL S +R + T SI+ I+++D + G +
Sbjct: 231 ARANFYSLSGSDFVELYVGVGASRVRSLFKKARETAPSIIFIDEIDAIGRQRSAAESGGA 290
Query: 322 VGSNTKLTLSGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINMSYCT 380
+ + TL+ +L +DG S D+ ++VF TN + +D ALLRPGR D +++
Sbjct: 291 QQEHDQ-TLNALLVAMDGFDS---DDAVVVFGATNRPDTMDRALLRPGRFDRQVSVGLPD 346
Query: 381 VHG 383
+ G
Sbjct: 347 LRG 349
>sp|A8ZNZ4|FTSH_ACAM1 ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina
(strain MBIC 11017) GN=ftsH PE=3 SV=1
Length = 655
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 11/173 (6%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E K +L+ +D FL + Y R+G +G LL GPPGTGK+ L A+A
Sbjct: 174 TFDDVAGVEEAKTELLEIVD-FLAHADKYTRLGAKIPKGVLLVGPPGTGKTLLAKAIAGE 232
Query: 270 LR---FDIYDLELTSIYSNSDLRRI--LLSTTNRS---ILVIEDVDCSVEMKDRQNDGAS 321
+ F I E ++ R+ L + I+ I+++D + +
Sbjct: 233 AKVPFFSISGSEFIELFVGIGAARVRDLFEQAKQQAPCIVFIDELDALGKARGGPGGFTG 292
Query: 322 VGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
+ TL+ +L+ +DG + G I++ TN E +DPALLRPGR D I
Sbjct: 293 GNDEREQTLNQLLSEMDGFDPNVG--VILLAATNRPEVLDPALLRPGRFDRQI 343
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 266
TFD +A E KQ ++ ++ FL++ E + VG +G LL GPPGTGK+ L IA
Sbjct: 218 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 267 ANYLRFDIYDLELTSIYSNSDLRRI--LLSTTNRSILVIEDVDCSVEMKDRQNDGASVGS 324
A F I E ++ R+ L + I VD ++ RQ G
Sbjct: 277 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD-EIDAVGRQRGTGIGGG 335
Query: 325 N--TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVH 382
N + TL+ +L +DG + G I+V TN + +D ALLRPGR D +++ V
Sbjct: 336 NDEREQTLNQLLTEMDGFEGNTG--VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVK 393
Query: 383 G 383
G
Sbjct: 394 G 394
>sp|Q5UPR4|YR776_MIMIV Uncharacterized protein R776 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R776 PE=4 SV=1
Length = 314
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 200 WGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGK 259
W + P F + E++ +L D+D F+R ++ YR +G ++RG LLYG G GK
Sbjct: 156 WSYPIIRRPCKFLDSNLTTEMRS-VLKDVDVFMRNEDTYRELGANYRRGMLLYGESGCGK 214
Query: 260 SSLIAAMANYLRFDIYDLELTSI-YSNSDLRRILLSTTNRSILVIEDVDCSVEMKDRQND 318
+ LI+ ++N D Y L L S S+S L + + RSILVIE++ D+Q +
Sbjct: 215 TGLISIISNKYGMDSYILNLNSKDMSDSVLISLASNVKARSILVIEEI-------DKQIE 267
Query: 319 GASVGSNTKLTLSGILNFIDG 339
+ N +++ G+L+ +DG
Sbjct: 268 TLNANGNKNVSIGGLLSALDG 288
>sp|P85200|PRS6B_HELAN 26S protease regulatory subunit 6B homolog OS=Helianthus annuus
PE=1 SV=1
Length = 414
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 221 KQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLR---FDIYDL 277
KQ I + ++ L E Y+++G RG LLYGPPGTGK+ L A+AN+ +
Sbjct: 170 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGS 229
Query: 278 ELTSIYSNSDLRRI-----LLSTTNRSILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSG 332
E Y R + L +I+ I++VD + GA + L
Sbjct: 230 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGAD--REVQRILME 287
Query: 333 ILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
+LN +DG + + ++ TN + +DPALLRPGR+D I
Sbjct: 288 LLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLDRKI 327
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLR---FDIYDLELTSIYSNSDL 288
L + E +++VG +G LLYGPPGTGK+ L A+AN + I EL Y
Sbjct: 179 LLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGA 238
Query: 289 RRI-----LLSTTNRSILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSS 343
R + L + SI+ I+++D S+ K R + S + TL +L +DG +
Sbjct: 239 RMVRELFELAKEKSPSIIFIDEID-SIGAK-RLDSITSGDREVQRTLVQLLAEMDG-FDP 295
Query: 344 CGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHG 383
G+ RI+ TN + +DPALLRPGR D I + T
Sbjct: 296 RGNVRILA-ATNRPDILDPALLRPGRFDRMIKVPMPTAEA 334
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 266
TFD +A E KQ ++ ++ FL++ E + VG +G LL GPPGTGK+ L IA
Sbjct: 212 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 270
Query: 267 ANYLRFDIYDLELTSIYSNSDLRRI--LLSTTNRSILVIEDVDCSVEMKDRQNDGASVGS 324
A F I E ++ R+ L + I VD ++ RQ G
Sbjct: 271 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD-EIDAVGRQRGTGIGGG 329
Query: 325 N--TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVH 382
N + TL+ +L +DG + G I++ TN + +D ALLRPGR D +++ V
Sbjct: 330 NDEREQTLNQLLTEMDGFEGNTG--IIVIAATNRADILDSALLRPGRFDRQVSVDVPDVR 387
Query: 383 G----FKVLASN 390
G KV SN
Sbjct: 388 GRTEILKVHGSN 399
>sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2
Length = 717
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 21/179 (11%)
Query: 225 LDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLRFDIYDLELTS 281
L+++ +LR + + R+G +G LL GPPGTGK+ L IA A F E
Sbjct: 239 LEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEE 298
Query: 282 IYSNSDLRRI--LLSTTNR---SILVIEDVDC---SVEMKDRQNDGASVGSNTKLTLSGI 333
++ RR+ L S + I+ I+++D S KD+Q K+TL+ +
Sbjct: 299 MFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQ--------YMKMTLNQM 350
Query: 334 LNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLASNYL 392
L +DG + G I+V TN E +D AL+RPGR D HI + V G + + +++
Sbjct: 351 LVELDGFKQNEGI--IVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHM 407
>sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PEX6 PE=3 SV=1
Length = 1000
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 13/170 (7%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
T+D + +K I+D +D L+ E + G + G L YGPPGTGK+ L A+A+
Sbjct: 700 TWDDIGGMDVVKGEIMDTIDMPLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAKAIASN 758
Query: 270 LRFDIYDL---ELTSIY---SNSDLRRILLSTTNRSILVI--EDVDCSVEMKDRQNDGAS 321
+ + + EL ++Y S +++RR+ + VI +++D SV K R N G S
Sbjct: 759 FSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELD-SVAPK-RGNQGDS 816
Query: 322 VGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 371
G ++ +S +L +DG+ SS GD ++ TN + +D ALLRPGR D
Sbjct: 817 GGVMDRI-VSQLLAELDGM-SSGGDGVFVIGATNRPDLLDEALLRPGRFD 864
>sp|D1C4U5|FTSH3_SPHTD ATP-dependent zinc metalloprotease FtsH 3 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH3 PE=3
SV=1
Length = 489
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 205 LEHP-STFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL- 262
+E P +TF +A E K+ L ++ FLR E +RR+G RG LL GPPGTGK+ L
Sbjct: 47 VERPETTFSDVAGLIEAKEE-LAEIVTFLRDPERFRRMGARMPRGVLLAGPPGTGKTLLA 105
Query: 263 --IAAMANYLRFDIYDLELTSIYSNSDLRRI--LLSTTNR---SILVIEDVDCSVEMKDR 315
+A A F + + +Y +R+ L + + +I+ I+++D + R
Sbjct: 106 RAVAGEAGVPFFAMSASQFVEVYVGVGAKRVRDLFAAARKASPAIVFIDEIDA---IGRR 162
Query: 316 QNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHIN 375
+ D S + TL+ +L +DG +++ TN + +DPALLRPGR D +
Sbjct: 163 RGDSQS-HQEYEQTLNQVLVELDGFHPR--QAVVVIAATNRSDILDPALLRPGRFDRRVE 219
Query: 376 MS 377
+S
Sbjct: 220 LS 221
>sp|B8J992|FTSH_ANAD2 ATP-dependent zinc metalloprotease FtsH OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=ftsH PE=3
SV=1
Length = 706
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 225 LDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLRFDIYDL------E 278
L ++ FL+ E YRR+G +G LL GPPGTGK+ L A A + L E
Sbjct: 218 LQEIVEFLKTPEKYRRLGGRIPKGVLLVGPPGTGKTLLARATAGEAGVPFFSLSGSEFVE 277
Query: 279 LTSIYSNSDLRRILLSTTNRS--ILVIEDVDCSVEMKDRQNDGASVGSNTK-LTLSGILN 335
+ + +R + T ++ I+ I+++D + +N G G + + TL+ +L
Sbjct: 278 MFVGVGAARVRDLFAQATQKAPCIVFIDELDA---LGKSRNAGIMGGHDEREQTLNQLLA 334
Query: 336 FIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 374
+DG + G II+ TN E +DPALLRPGR D +
Sbjct: 335 EMDGFDARAG--LIIMGATNRPEILDPALLRPGRFDRQV 371
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 266
TF +A E KQ + + +D FLR + ++R+G RG LL GPPGTGK+ L IA
Sbjct: 154 TFKDVAGVEEAKQDLQEIVD-FLREPQKFQRLGGRIPRGVLLVGPPGTGKTLLARSIAGE 212
Query: 267 ANYLRFDIYDLELTSIYSNSDLRRI--LLSTTNRS---ILVIEDVDCSVEMKDRQNDGAS 321
AN F I + ++ R+ + ++ I+ I+++D ++ GA
Sbjct: 213 ANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAV-----GRHRGAG 267
Query: 322 VGSNT---KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSY 378
+G + TL+ +L +DG + + I++ TN + +DPALLRPGR D + +
Sbjct: 268 LGGGNDEREQTLNQLLVEMDGFEPN--ESIILIAATNRPDVLDPALLRPGRFDRQVVVPN 325
Query: 379 CTVHG 383
V G
Sbjct: 326 PDVAG 330
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 210 TFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
T+D + ++ +LK I + ++ L++ E ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLK-AIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 269 YLRFDIYDLELTSIYSN------SDLRRILLSTTNR--SILVIEDVDCSVEMKDRQNDGA 320
+ + + I S + LR+I T R SI+ I+++D + +GA
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP----KREGA 465
Query: 321 SVGSNTKLTLSGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINM 376
K ++ +L +DG+ S + R++V TN + +D AL RPGR D I +
Sbjct: 466 Q-SEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LRF-DIYDLELTSIY---SN 285
L+ + + R+G +G LLYGPPG K+ + A+AN L F I EL + Y S
Sbjct: 647 LKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 286 SDLRRIL--LSTTNRSILVIEDVDCSVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSS 343
+R I SI+ +++D + + + G+ L+ +L +DG+
Sbjct: 707 RAVREIFRKARAVAPSIIFFDELDA---LAVERGSSSGAGNVADRVLAQLLTEMDGIEQL 763
Query: 344 CGDERIIVFTTNHKERIDPALLRPGRMD 371
++ TN +RID AL+RPGR+D
Sbjct: 764 --KNVTVLAATNRPDRIDKALMRPGRID 789
>sp|P40341|YTA12_YEAST Mitochondrial respiratory chain complexes assembly protein YTA12
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YTA12 PE=1 SV=2
Length = 825
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 25/219 (11%)
Query: 193 GGGGGGMWGSINLEHPSTFDT----------LAMDPELKQMILDDLDRFLRRKEFYRRVG 242
GG GG++G ++ F+T +A E K+ I++ + FL+ Y ++G
Sbjct: 320 GGSRGGIFG-LSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVS-FLKEPSRYEKMG 377
Query: 243 KAWKRGYLLYGPPGTGKSSLIAAMANYLRFDIYDL---ELTSIYSNSDLRRI--LLSTTN 297
RG +L GPPGTGK+ L A A Y + E ++ R+ L T
Sbjct: 378 AKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTAR 437
Query: 298 R---SILVIEDVDCSVEMKDRQN-DGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFT 353
SI+ I+++D + + + N GA+ + TL+ +L +DG + D +++
Sbjct: 438 ENAPSIVFIDEIDAIGKARQKGNFSGAN--DERENTLNQMLVEMDGF--TPADHVVVLAG 493
Query: 354 TNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLASNYL 392
TN + +D ALLRPGR D HIN+ + G K + + +L
Sbjct: 494 TNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHL 532
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAM 266
TFD +A E+K+ + + +D FL+ + Y +G +G LLYGPPGTGK+ L +A
Sbjct: 155 TFDDVAGIDEVKEELAEIVD-FLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGE 213
Query: 267 ANYLRFDIYDLELTSIYSNSDLRRI--LLSTTNRS---ILVIEDVDCSVEMKDRQNDGAS 321
A F I + ++ R+ L ++ I+ I+++D RQ GA
Sbjct: 214 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAV----GRQR-GAG 268
Query: 322 VGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSY 378
G + TL+ +L +DG ++ G II+ TN + +DPALLRPGR D I +
Sbjct: 269 YGGGHDEREQTLNQLLVEMDGFSANEGI--IIIAATNRPDVLDPALLRPGRFDRQIVIDR 326
Query: 379 CTVHG 383
+ G
Sbjct: 327 PDLKG 331
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,211,489
Number of Sequences: 539616
Number of extensions: 7884491
Number of successful extensions: 32812
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 31082
Number of HSP's gapped (non-prelim): 1418
length of query: 474
length of database: 191,569,459
effective HSP length: 121
effective length of query: 353
effective length of database: 126,275,923
effective search space: 44575400819
effective search space used: 44575400819
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)