BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011942
(474 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PHP|A Chain A, Structure Of The Adp Complex Of The 3-Phosphoglycerate
Kinase From Bacillus Stearothermophilus At 1.65
Angstroms
Length = 394
Score = 413 bits (1062), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/400 (55%), Positives = 278/400 (69%), Gaps = 8/400 (2%)
Query: 70 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVIL 129
M KK++ ++ D++GK+VF R D NVP++ ITDDTRIRAA+PTI++LI++GAKVIL
Sbjct: 1 MNKKTIRDV---DVRGKRVFCRVDFNVPMEQGA-ITDDTRIRAALPTIRYLIEHGAKVIL 56
Query: 130 SSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLEN 188
+SHLGRPKG V + L + RL ELL V K ++ +G EV+ V L EG VLLLEN
Sbjct: 57 ASHLGRPKGKVVEELRLDAVAKRLGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLEN 116
Query: 189 VRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKEL 248
VRFY EEKNDPE AK A LADLYVNDAFG AHRAHASTEG+ YL P+VAGFL++KEL
Sbjct: 117 VRFYPGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKEL 175
Query: 249 DYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGS 308
+ L A+S+P RPF AI+GG+KV KIGVI++LLE D L++GGG+ +TF KA G VG
Sbjct: 176 EVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGK 235
Query: 309 SLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDI 368
SL+EE GV +P DVV+AD+FA DAN+KVVP AIP W LDI
Sbjct: 236 SLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDI 295
Query: 369 GPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDS 428
GP + + + + + +K V+WNGPMGVFE D FA GT+AIA+ LA ++IGGGDS
Sbjct: 296 GPKTRELYRDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALA--EALDTYSVIGGGDS 353
Query: 429 XXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDE 468
M HISTGGGASLE +EGK+LPGVVAL++
Sbjct: 354 AAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALED 393
>pdb|1VPE|A Chain A, Crystallographic Analysis Of Phosphoglycerate Kinase From
The Hyperthermophilic Bacterium Thermotoga Maritima
Length = 398
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/387 (54%), Positives = 267/387 (68%), Gaps = 4/387 (1%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-T 140
DLKGK+V +R D NVP+ D + DDTRIRAA+PTIK+ ++ GAKVIL SHLGRPKG +
Sbjct: 9 DLKGKRVIMRVDFNVPVKDGV-VQDDTRIRAALPTIKYALEQGAKVILLSHLGRPKGEPS 67
Query: 141 PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDP 200
P+FSLAP+ RLSELLG +V +G EV+K V L EG VLLLEN RF+ E KNDP
Sbjct: 68 PEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKNDP 127
Query: 201 EFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSSPKR 260
E AK ASLAD++VNDAFGTAHRAHAS G+ +++ PSVAGFL++KE+ +L +P++
Sbjct: 128 ELAKFWASLADIHVNDAFGTAHRAHASNVGIAQFI-PSVAGFLMEKEIKFLSKVTYNPEK 186
Query: 261 PFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXX 320
P+ ++GG+KVS KIGVI +L+E D +L+GG M+FTF KA G VGSS VEE
Sbjct: 187 PYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAK 246
Query: 321 XXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPAT-AIPDGWMGLDIGPDSVKTFNEA 379
GV ++LP D VIA K P KVV IP+GWMGLDIGP++++ F +
Sbjct: 247 ELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQK 306
Query: 380 LDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXXXX 439
L KTV+WNGPMGVFE D FA GT+ +A +A L+ KG T++GGGDS
Sbjct: 307 LSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLED 366
Query: 440 XMSHISTGGGASLELLEGKELPGVVAL 466
SH+STGGGASLE LEGKELPG+ ++
Sbjct: 367 KFSHVSTGGGASLEFLEGKELPGIASM 393
>pdb|3UWD|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Bacillus
Anthracis
Length = 394
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/398 (52%), Positives = 272/398 (68%), Gaps = 8/398 (2%)
Query: 72 KKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSS 131
KKS+ ++ DLKGK+VF R D NVP + + ITD+TRIRAA+PTI++L++ GAKVIL+S
Sbjct: 3 KKSIRDV---DLKGKRVFCRVDFNVPXKEGK-ITDETRIRAALPTIQYLVEQGAKVILAS 58
Query: 132 HLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVR 190
HLGRPKG + L P+ RL ELLG V KAD+ GP ++ VA+ EG VL+LENVR
Sbjct: 59 HLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEXVAAXNEGDVLVLENVR 118
Query: 191 FYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDY 250
FY EEKND E AK+ A+LAD++VNDAFG AHRAHAST G+ YL P+V+G L +KEL+
Sbjct: 119 FYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLXEKELEV 177
Query: 251 LVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSL 310
L A+S+P+RPFAAI+GG+KV KIG+I LL+ D L++GGG+ +TF KA G +G SL
Sbjct: 178 LGKALSNPERPFAAIIGGAKVKDKIGLIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSL 237
Query: 311 VEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGP 370
E+ GVN P DVVI ++F+ A +K+V +IP W G+DIGP
Sbjct: 238 CEDDKIELAKEFXQLAKEKGVNFYXPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGP 297
Query: 371 DSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXX 430
+ + + + + +K V+WNGP GVFE FA GT+A+ + LAD +G ++IGGGDS
Sbjct: 298 KTREIYADVIKNSKLVVWNGPXGVFEXTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAA 355
Query: 431 XXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDE 468
SHISTGGGASLE EGKELPGVV L++
Sbjct: 356 AVEKFGXADKXSHISTGGGASLEFXEGKELPGVVCLND 393
>pdb|3Q3V|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Campylobacter Jejuni.
pdb|3Q3V|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Campylobacter Jejuni
Length = 403
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 249/400 (62%), Gaps = 5/400 (1%)
Query: 69 SMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVI 128
S A + + DL KKVF+R D NVP DD NITDD RIR+A+PTI++ + NG VI
Sbjct: 1 SNAXSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVI 60
Query: 129 LSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLEN 188
L+SHLGRPK ++ K+SL P+ RL+ LL ++V A D IG + + +L G +LLLEN
Sbjct: 61 LASHLGRPKEISSKYSLEPVAKRLARLLDKEIVXAKDVIGEDAKTKAXNLKAGEILLLEN 120
Query: 189 VRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYL--KPSVAGFLLQK 246
+RF K E KND AK+LAS +Y+NDAFG HRAH+S E +TK+ K AGFLLQK
Sbjct: 121 LRFEKGETKNDENLAKELASXVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQK 180
Query: 247 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISV 306
E+D+ + P RPF A+VGGSKVS K+ + +LL D L++GGG FTF KA G +
Sbjct: 181 EIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGXAFTFLKALGYDI 240
Query: 307 GSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGL 366
G+SL+EE GV + LP DVV A + D K VPA IP+GW GL
Sbjct: 241 GNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDVPXKFVPAQEIPNGWXGL 300
Query: 367 DIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGG 426
DIGP SV+ F E + +T+ WNGP GVFE DKF+ G+ K +S T+++GGG
Sbjct: 301 DIGPASVRLFKEVISDAQTIWWNGPXGVFEIDKFSKGS---IKXSHYISEGHATSVVGGG 357
Query: 427 DSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
D+ + ISTGGGASLEL+EGKELPGV AL
Sbjct: 358 DTADVVARAGDADEXTFISTGGGASLELIEGKELPGVKAL 397
>pdb|1VJC|A Chain A, Structure Of Pig Muscle Pgk Complexed With Mgatp
pdb|1VJD|A Chain A, Structure Of Pig Muscle Pgk Complexed With Atp
Length = 416
Score = 354 bits (909), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 193/409 (47%), Positives = 259/409 (63%), Gaps = 23/409 (5%)
Query: 78 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRP 136
L D+KGK+V +R D NVP+ +NQ IT++ RI+AA+P+IK + NGAK V+L SHLGRP
Sbjct: 8 LDKLDVKGKRVVMRVDFNVPMKNNQ-ITNNQRIKAAIPSIKFCLDNGAKSVVLMSHLGRP 66
Query: 137 KGVT--PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKE 194
G+ K+SL P+ L LLG V+ DC+GPEVEK A G V+LLEN+RF+ E
Sbjct: 67 DGIPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRFHVE 126
Query: 195 EE-----------KNDPE----FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSV 239
EE K DP F L+ L D+YVNDAFGTAHRAH+S GV L
Sbjct: 127 EEGKGKDASGSKVKADPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPKKA 184
Query: 240 AGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFY 299
GFL++KEL+Y A+ SP+RPF AI+GG+KV+ KI +I ++L+ + +++GGGM FTF
Sbjct: 185 GGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 244
Query: 300 KA-QGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANS-KVVPAT 357
K + +G+SL +E GV + LP D V ADKF +A + + A+
Sbjct: 245 KVLNNMEIGTSLFDEEGSKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVAS 304
Query: 358 AIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGK 417
IP GWMGLD GP+S K ++EA+ K ++WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 305 GIPAGWMGLDCGPESSKKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSR 364
Query: 418 GVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
G TIIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 365 GCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 413
>pdb|2ZGV|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To D-Adp
pdb|3C39|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate
pdb|3C39|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate
pdb|3C3A|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Adp
pdb|3C3A|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Adp
pdb|3C3B|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To D-Cdp
pdb|3C3B|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To D-Cdp
pdb|3C3C|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Cdp
pdb|3C3C|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Cdp
Length = 420
Score = 354 bits (908), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 193/405 (47%), Positives = 258/405 (63%), Gaps = 23/405 (5%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKGVT 140
D+KGK+V +R D NVP+ +NQ IT++ RI+AAVP+IK + NGAK V+L SHLGRP GV
Sbjct: 16 DVKGKRVVMRVDFNVPMKNNQ-ITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVP 74
Query: 141 --PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE-- 196
K+SL P+ L LLG V+ DC+GPEVEK A+ G V+LLEN+RF+ EEE
Sbjct: 75 MPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGK 134
Query: 197 ---------KNDPE----FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFL 243
K +P F L+ L D+YVNDAFGTAHRAH+S GV L GFL
Sbjct: 135 GKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKAGGFL 192
Query: 244 LQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-Q 302
++KEL+Y A+ SP+RPF AI+GG+KV+ KI +I ++L+ + +++GGGM FTF K
Sbjct: 193 MKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLN 252
Query: 303 GISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANS-KVVPATAIPD 361
+ +G+SL +E GV + LP D V ADKF +A + + A+ IP
Sbjct: 253 NMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPA 312
Query: 362 GWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTT 421
GWMGLD GP+S K + EA+ K ++WNGP+GVFE++ FA GT+A+ ++ + +G T
Sbjct: 313 GWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCIT 372
Query: 422 IIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
IIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 373 IIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 417
>pdb|2WZB|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp, 3pg
And Magnesium Trifluoride
pdb|2WZC|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp, 3pg
And Aluminium Tetrafluoride
pdb|2X13|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp And
3phosphoglycerate
pdb|2X15|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp And
1,3- Bisphosphoglycerate
Length = 416
Score = 353 bits (907), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 194/409 (47%), Positives = 259/409 (63%), Gaps = 23/409 (5%)
Query: 78 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRP 136
L D+KGK+V +R D NVP+ +NQ IT++ RI+AAVP+IK + NGAK V+L SHLGRP
Sbjct: 8 LDKLDVKGKRVVMRVDFNVPMKNNQ-ITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRP 66
Query: 137 KGVT--PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKE 194
GV K+SL P+ L LLG V+ DC+GPEVEK A+ G V+LLEN+RF+ E
Sbjct: 67 DGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVE 126
Query: 195 EE-----------KNDPE----FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSV 239
EE K +P F L+ L D+YVNDAFGTAHRAH+S GV L
Sbjct: 127 EEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 184
Query: 240 AGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFY 299
GFL++KEL+Y A+ SP+RPF AI+GG+KV+ KI +I ++L+ + +++GGGM FTF
Sbjct: 185 GGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 244
Query: 300 KA-QGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANS-KVVPAT 357
K + +G+SL +E GV + LP D V ADKF +A + + A+
Sbjct: 245 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVAS 304
Query: 358 AIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGK 417
IP GWMGLD GP+S K + EA+ K ++WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 305 GIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSR 364
Query: 418 GVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
G TIIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 365 GCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 413
>pdb|2Y3I|A Chain A, The Structure Of The Fully Closed Conformation Of Human
Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium
Tetrafluoride
pdb|2Y3I|D Chain D, The Structure Of The Fully Closed Conformation Of Human
Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium
Tetrafluoride
Length = 416
Score = 353 bits (907), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 194/409 (47%), Positives = 259/409 (63%), Gaps = 23/409 (5%)
Query: 78 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRP 136
L D+KGK+V +R D NVP+ +NQ IT++ RI+AAVP+IK + NGAK V+L SHLGRP
Sbjct: 9 LDKLDVKGKRVVMRVDFNVPMKNNQ-ITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRP 67
Query: 137 KGVT--PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKE 194
GV K+SL P+ L LLG V+ DC+GPEVEK A+ G V+LLEN+RF+ E
Sbjct: 68 DGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVE 127
Query: 195 EE-----------KNDPE----FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSV 239
EE K +P F L+ L D+YVNDAFGTAHRAH+S GV L
Sbjct: 128 EEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 185
Query: 240 AGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFY 299
GFL++KEL+Y A+ SP+RPF AI+GG+KV+ KI +I ++L+ + +++GGGM FTF
Sbjct: 186 GGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 245
Query: 300 KA-QGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANS-KVVPAT 357
K + +G+SL +E GV + LP D V ADKF +A + + A+
Sbjct: 246 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVAS 305
Query: 358 AIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGK 417
IP GWMGLD GP+S K + EA+ K ++WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 306 GIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSR 365
Query: 418 GVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
G TIIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 366 GCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 414
>pdb|2XE6|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate
Kinase: The Open Binary Complex With 3pg
pdb|2XE7|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate
Kinase: The Open Ternary Complex With 3pg And Adp
pdb|2XE8|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate
Kinase: The Open Ternary Complex With 3pg And Amp-Pnp
pdb|2YBE|A Chain A, The Structure Of The Fully Closed Conformation Of Human
Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium
Tetrafluoride At 2.0 A Resolution
Length = 417
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/409 (47%), Positives = 259/409 (63%), Gaps = 23/409 (5%)
Query: 78 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRP 136
L D+KGK+V +R D NVP+ +NQ IT++ RI+AAVP+IK + NGAK V+L SHLGRP
Sbjct: 9 LDKLDVKGKRVVMRVDFNVPMKNNQ-ITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRP 67
Query: 137 KGVT--PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKE 194
GV K+SL P+ L LLG V+ DC+GPEVEK A+ G V+LLEN+RF+ E
Sbjct: 68 DGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVE 127
Query: 195 EE-----------KNDPE----FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSV 239
EE K +P F L+ L D+YVNDAFGTAHRAH+S GV L
Sbjct: 128 EEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 185
Query: 240 AGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFY 299
GFL++KEL+Y A+ SP+RPF AI+GG+KV+ KI +I ++L+ + +++GGGM FTF
Sbjct: 186 GGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 245
Query: 300 KA-QGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANS-KVVPAT 357
K + +G+SL +E GV + LP D V ADKF +A + + A+
Sbjct: 246 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVAS 305
Query: 358 AIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGK 417
IP GWMGLD GP+S K + EA+ K ++WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 306 GIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSR 365
Query: 418 GVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
G TIIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 366 GCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 414
>pdb|2P9Q|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2
pdb|2P9Q|B Chain B, Crystal Structure Of Phosphoglycerate Kinase-2
pdb|2P9T|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2 Bound To 3-
Phosphoglycerate
pdb|2PAA|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2 Bound To
Atp And 3pg
pdb|2PAA|B Chain B, Crystal Structure Of Phosphoglycerate Kinase-2 Bound To
Atp And 3pg
Length = 416
Score = 352 bits (902), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/411 (46%), Positives = 257/411 (62%), Gaps = 27/411 (6%)
Query: 78 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRP 136
L DLKGK+V +R D NVP+ +NQ IT++ RI+AA+P+IKH + NGAK V+L SHLGRP
Sbjct: 8 LDKVDLKGKRVIMRVDFNVPMKNNQ-ITNNQRIKAAIPSIKHCLDNGAKSVVLMSHLGRP 66
Query: 137 KGVT--PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKE 194
G+ K+SL P+ L LL V+ DC+GPEVE+ A+ G ++LLEN+RF+ E
Sbjct: 67 DGIPMPDKYSLEPVADELKSLLNKDVIFLKDCVGPEVEQACANPDNGSIILLENLRFHVE 126
Query: 195 EEKN-----------DPE----FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSV 239
EE DP F L+ L D+YVNDAFGTAHRAH+S GV L
Sbjct: 127 EEGKGKDSSGKKISADPAKVEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 184
Query: 240 AGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFY 299
+GFL++KELDY A+ P+RPF AI+GG+KV KI +I+++L+ + +++GGGM +TF
Sbjct: 185 SGFLMKKELDYFSKALEKPERPFLAILGGAKVKDKIQLIKNMLDKVNFMIIGGGMAYTFL 244
Query: 300 KA-QGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPAT- 357
K + + +G+SL +E GV ++ P D V DKF D N+KV AT
Sbjct: 245 KELKNMQIGASLFDEEGATIVKEIMEKAEKNGVKIVFPVDFVTGDKF--DENAKVGQATI 302
Query: 358 --AIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLS 415
IP GWMGLD GP+S+K + + K ++WNGP+GVFE+D FA GT+A+ ++ +
Sbjct: 303 ESGIPSGWMGLDCGPESIKINAQIVAQAKLIVWNGPIGVFEWDAFAKGTKALMDEVVKAT 362
Query: 416 GKGVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
G TIIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 363 SNGCVTIIGGGDTATCCAKWGTEDKVSHVSTGGGASLELLEGKILPGVEAL 413
>pdb|2X14|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase K219a Mutant In Complex
With Amp-Pcp And 3pg
Length = 416
Score = 352 bits (902), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 193/409 (47%), Positives = 258/409 (63%), Gaps = 23/409 (5%)
Query: 78 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRP 136
L D+KGK+V +R D NVP+ +NQ IT++ RI+AAVP+IK + NGAK V+L SHLGRP
Sbjct: 8 LDKLDVKGKRVVMRVDFNVPMKNNQ-ITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRP 66
Query: 137 KGVT--PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKE 194
GV K+SL P+ L LLG V+ DC+GPEVEK A+ G V+LLEN+RF+ E
Sbjct: 67 DGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVE 126
Query: 195 EE-----------KNDPE----FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSV 239
EE K +P F L+ L D+YVNDAFGTAHRAH+S GV L
Sbjct: 127 EEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 184
Query: 240 AGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFY 299
GFL++KEL+Y A+ SP+RPF AI+GG+KV+ I +I ++L+ + +++GGGM FTF
Sbjct: 185 GGFLMKKELNYFAKALESPERPFLAILGGAKVADAIQLINNMLDKVNEMIIGGGMAFTFL 244
Query: 300 KA-QGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANS-KVVPAT 357
K + +G+SL +E GV + LP D V ADKF +A + + A+
Sbjct: 245 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVAS 304
Query: 358 AIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGK 417
IP GWMGLD GP+S K + EA+ K ++WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 305 GIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSR 364
Query: 418 GVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
G TIIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 365 GCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 413
>pdb|2WZD|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase K219a Mutant In Complex
With Adp, 3pg And Aluminium Trifluoride
Length = 417
Score = 351 bits (901), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 192/405 (47%), Positives = 257/405 (63%), Gaps = 23/405 (5%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKGVT 140
D+KGK+V +R D NVP+ +NQ IT++ RI+AAVP+IK + NGAK V+L SHLGRP GV
Sbjct: 13 DVKGKRVVMRVDFNVPMKNNQ-ITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVP 71
Query: 141 --PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE-- 196
K+SL P+ L LLG V+ DC+GPEVEK A+ G V+LLEN+RF+ EEE
Sbjct: 72 MPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGK 131
Query: 197 ---------KNDPE----FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFL 243
K +P F L+ L D+YVNDAFGTAHRAH+S GV L GFL
Sbjct: 132 GKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKAGGFL 189
Query: 244 LQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-Q 302
++KEL+Y A+ SP+RPF AI+GG+KV+ I +I ++L+ + +++GGGM FTF K
Sbjct: 190 MKKELNYFAKALESPERPFLAILGGAKVADAIQLINNMLDKVNEMIIGGGMAFTFLKVLN 249
Query: 303 GISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANS-KVVPATAIPD 361
+ +G+SL +E GV + LP D V ADKF +A + + A+ IP
Sbjct: 250 NMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPA 309
Query: 362 GWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTT 421
GWMGLD GP+S K + EA+ K ++WNGP+GVFE++ FA GT+A+ ++ + +G T
Sbjct: 310 GWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCIT 369
Query: 422 IIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
IIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 370 IIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 414
>pdb|1QPG|A Chain A, 3-Phosphoglycerate Kinase, Mutation R65q
Length = 415
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/405 (47%), Positives = 257/405 (63%), Gaps = 21/405 (5%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-V 139
DLK K+VF+R D NVPLD + IT + RI AA+PTIK+++++ + V+L+SHLG+P G
Sbjct: 12 DLKDKRVFIRVDFNVPLD-GKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPNGER 70
Query: 140 TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE--- 196
K+SLAP+ L LLG V +DC+GPEVE V + G V+LLEN+R++ EEE
Sbjct: 71 NEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSR 130
Query: 197 ----------KND-PEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQ 245
K D +F +L+SLAD+Y+NDAFGTAHRAH+S G L AGFLL+
Sbjct: 131 KVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFD--LPQRAAGFLLE 188
Query: 246 KELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-QGI 304
KEL Y A+ +P RPF AI+GG+KV+ KI +I++LL+ D +++GGGM FTF K +
Sbjct: 189 KELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENT 248
Query: 305 SVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVP-ATAIPDGW 363
+G S+ ++ GV ++LP D +IAD F+ DAN+K V IP GW
Sbjct: 249 EIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGW 308
Query: 364 MGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTII 423
GLD GP+S K F + KT++WNGP GVFEF+KFA GT+A+ ++ S G T II
Sbjct: 309 QGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVII 368
Query: 424 GGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDE 468
GGGD+ +SH+STGGGASLELLEGKELPGV L E
Sbjct: 369 GGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 413
>pdb|1KF0|A Chain A, Crystal Structure Of Pig Muscle Phosphoglycerate Kinase
Ternary Complex With Amp-Pcp And 3pg
Length = 416
Score = 348 bits (893), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 190/405 (46%), Positives = 257/405 (63%), Gaps = 23/405 (5%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-- 138
++KGK+V +R D NVP+ +NQ IT++ RI+AAVP+IK + +GAK V+L SHLGRP G
Sbjct: 12 NVKGKRVVMRVDFNVPMKNNQ-ITNNQRIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSP 70
Query: 139 VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE-- 196
+ K+SL P+ L LLG V+ DC+GPEVEK A G V+LLEN+RF+ EEE
Sbjct: 71 MPDKYSLQPVAVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRFHVEEEGK 130
Query: 197 ---------KNDP----EFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFL 243
K +P F L+ L D+YVNDAFGTAHRAH+S GV L GFL
Sbjct: 131 GKDASGNKVKAEPAKIKTFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPKKAGGFL 188
Query: 244 LQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-Q 302
++KEL+Y A+ SP+RPF AI+GG+KV+ KI +I ++L+ + +++GGGM FTF K
Sbjct: 189 MKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLN 248
Query: 303 GISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANS-KVVPATAIPD 361
+ +G+SL +E GV + LP D V ADKF A + + A+ IP
Sbjct: 249 NMEIGTSLFDEEGAKIVKNLMSKAEKNGVKITLPVDFVTADKFDEHAKTGQATVASGIPA 308
Query: 362 GWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTT 421
GWMGLD GP+S K ++EA+ K ++WNGP+GVFE++ FA GT+A+ ++ + +G T
Sbjct: 309 GWMGLDCGPESSKKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCIT 368
Query: 422 IIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
IIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 369 IIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 413
>pdb|3PGK|A Chain A, The Structure Of Yeast Phosphoglycerate Kinase At 0.25 Nm
Resolution
Length = 416
Score = 344 bits (883), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 191/405 (47%), Positives = 254/405 (62%), Gaps = 21/405 (5%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-V 139
DLK K+VF+R D NVPLD + IT + RI AA+PTIK+++++ + V+L+SHLGRP G
Sbjct: 13 DLKDKRVFIRVDFNVPLD-GKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRPNGER 71
Query: 140 TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE--- 196
K+SLAP+ L LLG V +DC+GPEVE V + G V+LLEN+R++ EEE
Sbjct: 72 NEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSR 131
Query: 197 ----------KND-PEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQ 245
K D +F +L+SLAD+Y+NDAFGTAHRAH+S G L AGFLL+
Sbjct: 132 KVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFD--LPQRAAGFLLE 189
Query: 246 KELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-QGI 304
KEL Y A+ +P RPF AI+GG+KV+ KI +I++LL+ D +++GGGM FTF K +
Sbjct: 190 KELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENT 249
Query: 305 SVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVP-ATAIPDGW 363
+G S+ ++ GV ++LP D +IAD F+ AN+K V IP GW
Sbjct: 250 EIGDSIFDKAVGPEIAKLMEKAKAKGVEVVLPVDFIIADAFSASANTKTVTDKEGIPAGW 309
Query: 364 MGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTII 423
GLD GP+S K F + ++WNGP GVFEF+KFA GT+A+ ++ S G T II
Sbjct: 310 QGLDNGPESRKLFAATVAKATVILWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVII 369
Query: 424 GGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDE 468
GGGD+ +SH+STGGGASLELLEGKELPGV L E
Sbjct: 370 GGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 414
>pdb|4DG5|A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate
Kinase
Length = 403
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/403 (47%), Positives = 259/403 (64%), Gaps = 16/403 (3%)
Query: 71 AKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILS 130
AKK V +L DLKGK V VRAD NVPL D + IT+D RI A+PTI+++I+ G K++L
Sbjct: 9 AKKIVSDL---DLKGKTVLVRADFNVPLKDGE-ITNDNRIVQALPTIQYIIEQGGKIVLF 64
Query: 131 SHLGRPKGVT--PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLEN 188
SHLG+ K + K +L P+ LS+ L +VV + G ++E + L EG VLL+EN
Sbjct: 65 SHLGKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVEN 124
Query: 189 VRFY----KEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLL 244
R+ K+E KNDPE K ASL D++VNDAFGTAHR HAS G++ +L+ + AGFL+
Sbjct: 125 TRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLE-TAAGFLM 183
Query: 245 QKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGI 304
KE+ ++ G V+ P +P AI+GG+KVS KI VI++L+ D +++GGGM +TF KAQG
Sbjct: 184 DKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGK 243
Query: 305 SVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWM 364
+G SL+EE G ++LP D +A +F+ DA VVP+ +IP
Sbjct: 244 EIGISLLEEDKIDFAKDLLEKH---GDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQE 300
Query: 365 GLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIG 424
G+DIGP++VK F + L+ TV+WNGPMGVFEF FA GT + K +A+L K TIIG
Sbjct: 301 GMDIGPNTVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANL--KDAITIIG 358
Query: 425 GGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALD 467
GGDS +HISTGGGASLE LEGKELPG+ A++
Sbjct: 359 GGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKAIN 401
>pdb|3OZ7|A Chain A, Crystal Structure Of 3-Phosphopglycerate Kinase Of
Plasmodium Falciparum
pdb|3OZ7|B Chain B, Crystal Structure Of 3-Phosphopglycerate Kinase Of
Plasmodium Falciparum
Length = 417
Score = 340 bits (872), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/404 (46%), Positives = 250/404 (61%), Gaps = 22/404 (5%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGA-KVILSSHLGRPKGV- 139
D+K KKV VR D NVP++ N I D RI A +PTI HL + GA K+IL SH GRP G+
Sbjct: 15 DIKNKKVLVRVDFNVPIE-NGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLR 73
Query: 140 TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE--- 196
K++L P+ L LLG +V+ +DC+G EVE + + E V+LLEN+RF+ EEE
Sbjct: 74 NEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKG 133
Query: 197 -----------KNDPE-FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLL 244
K D E F L LAD+++NDAFGTAHRAH+S GV +K S GFL+
Sbjct: 134 VDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSMVGVKLNVKAS--GFLM 191
Query: 245 QKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-QG 303
+KEL+Y A+ +P+RP AI+GG+KVS KI +I++LL+ D +++GGGM +TF K
Sbjct: 192 KKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMAYTFKKVLNN 251
Query: 304 ISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSK-VVPATAIPDG 362
+ +G+SL +E V + LP D IAD F +AN+K V IPD
Sbjct: 252 MKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDN 311
Query: 363 WMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTI 422
WMGLD GP S++ + + + T+KTVIWNGP GVFE FA G+ + +++ KG TI
Sbjct: 312 WMGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITI 371
Query: 423 IGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
+GGGD+ +SH+STGGGASLELLEGKELPGV+AL
Sbjct: 372 VGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGKELPGVLAL 415
>pdb|1HDI|A Chain A, Pig Muscle 3-Phosphoglycerate Kinase Complexed With 3-Pg
And Mgadp
Length = 413
Score = 334 bits (856), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 185/407 (45%), Positives = 249/407 (61%), Gaps = 27/407 (6%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-- 138
++KGK+V +R D NVP+ Q IT++ RI+AAVP+IK + +GAK V+L SHLGRP G
Sbjct: 9 NVKGKRVVMRVDFNVPMAAAQ-ITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSP 67
Query: 139 VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKN 198
+ K+SL P+ L LG V+ DC+GP VEK A G V+LLEN+RF+ EEE
Sbjct: 68 MPDKYSLQPVAAELKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVEEEGK 127
Query: 199 DPE---------------FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFL 243
+ F L++L D+YVNDAFGTAHRAH+S GV L FL
Sbjct: 128 GKDASGNKAAGEPAKIKAFRASLSALGDVYVNDAFGTAHRAHSSMVGVN--LPKKAGAFL 185
Query: 244 LQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-Q 302
++KEL+Y A SP+RPF AI+GG+KV+ KI +I ++L+ + +++GGGM FTF K
Sbjct: 186 MKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLN 245
Query: 303 GISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPAT---AI 359
+ +G+SL +E GV + LP D V ADKF D +K+ AT I
Sbjct: 246 NMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKF--DEQAKIGQATVASGI 303
Query: 360 PDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGV 419
P GWMGLD GP S ++EA+ K ++WNGP+GVFE++ FA GT+A+ ++ + +G
Sbjct: 304 PAGWMGLDCGPKSSAKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGC 363
Query: 420 TTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
TIIGGGD+ +SH+STGGGASLELLEGK LPGV AL
Sbjct: 364 ITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLEGKVLPGVDAL 410
>pdb|1V6S|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Thermus
Thermophilus Hb8
pdb|1V6S|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From Thermus
Thermophilus Hb8
Length = 390
Score = 331 bits (849), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 186/390 (47%), Positives = 240/390 (61%), Gaps = 12/390 (3%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTP 141
D KGK+V VR D NVP+ D + + D+TRI ++PT++HL+ GA ++L SHLGRPKG P
Sbjct: 8 DPKGKRVLVRVDYNVPVQDGK-VQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPDP 66
Query: 142 KFSLAPLVPRLSELLGIQVVKADDCIGP----EVEKLVASLPEGGVLLLENVRFYKEEEK 197
K+SLAP+ E L + +A P E + +L G VLLLENVRF EEK
Sbjct: 67 KYSLAPV----GEALRAHLPEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEK 122
Query: 198 NDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSS 257
NDPE + + A L + +V DAFG+AHRAHAS GV + L P+ AGFL++KE+ L +
Sbjct: 123 NDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL-PAYAGFLMEKEVRALSRLLKD 181
Query: 258 PKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXX 317
P+RP+A ++GG+KVS KIGVIESLL D LL+GG M FTF KA G VG SLVEE
Sbjct: 182 PERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLD 241
Query: 318 XXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFN 377
GV + LP DVV A++ ++V PA AIP +MGLDIGP + + F
Sbjct: 242 LAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFA 301
Query: 378 EALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXX 437
AL+ +TV WNGPMGVFE F GT A+ + +A L +G T++GGGDS
Sbjct: 302 RALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAAL--EGAFTVVGGGDSVAAVNRLGL 359
Query: 438 XXXMSHISTGGGASLELLEGKELPGVVALD 467
H+STGGGASLE LE LPG+ L+
Sbjct: 360 KERFGHVSTGGGASLEFLEKGTLPGLEVLE 389
>pdb|2IE8|A Chain A, Crystal Structure Of Thermus Caldophilus Phosphoglycerate
Kinase In The Open Conformation
Length = 390
Score = 331 bits (848), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 185/390 (47%), Positives = 240/390 (61%), Gaps = 12/390 (3%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTP 141
D KGK+V VR D NVP+ D + + D+TRI ++PT++HL+ GA ++L SHLGRPKG P
Sbjct: 8 DPKGKRVLVRVDYNVPVQDGK-VQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPDP 66
Query: 142 KFSLAPLVPRLSELLGIQVVKADDCIGP----EVEKLVASLPEGGVLLLENVRFYKEEEK 197
++SLAP+ E L + +A P E + +L G VLLLENVRF EEK
Sbjct: 67 RYSLAPV----GEALRAHLPEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEK 122
Query: 198 NDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSS 257
NDPE + + A L + +V DAFG+AHRAHAS GV + L P+ AGFL++KE+ L +
Sbjct: 123 NDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL-PAYAGFLMEKEVRALSRLLKD 181
Query: 258 PKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXX 317
P+RP+A ++GG+KVS KIGVIESLL D LL+GG M FTF KA G VG SLVEE
Sbjct: 182 PERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLD 241
Query: 318 XXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFN 377
GV + LP DVV A++ ++V PA AIP +MGLDIGP + + F
Sbjct: 242 LAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFA 301
Query: 378 EALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXXXXX 437
AL+ +TV WNGPMGVFE F GT A+ + +A L +G T++GGGDS
Sbjct: 302 RALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAAL--EGAFTVVGGGDSVAAVNRLGL 359
Query: 438 XXXMSHISTGGGASLELLEGKELPGVVALD 467
H+STGGGASLE LE LPG+ L+
Sbjct: 360 KERFGHVSTGGGASLEFLEKGTLPGLEVLE 389
>pdb|3OZA|A Chain A, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
pdb|3OZA|B Chain B, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
pdb|3OZA|C Chain C, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
Length = 424
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/404 (46%), Positives = 246/404 (60%), Gaps = 22/404 (5%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGA-KVILSSHLGRPKGV- 139
D+K KKV VR D NVP++ N I D RI A +PTI HL + GA K+IL SH GRP G+
Sbjct: 21 DIKNKKVLVRVDFNVPIE-NGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLR 79
Query: 140 TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE--- 196
K++L P+ L LLG +V+ +DC+G EVE + + E V+LLEN+RF+ EEE
Sbjct: 80 NEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKG 139
Query: 197 -----------KNDPE-FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLL 244
K D E F L LAD+++NDAFGTAHRAH+S GV +K S GFL
Sbjct: 140 VDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSXVGVKLNVKAS--GFLX 197
Query: 245 QKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-QG 303
+KEL+Y A+ +P+RP AI+GG+KVS KI +I++LL+ D ++GGG +TF K
Sbjct: 198 KKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRXIIGGGXAYTFKKVLNN 257
Query: 304 ISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSK-VVPATAIPDG 362
+G+SL +E V + LP D IAD F +AN+K V IPD
Sbjct: 258 XKIGTSLFDEAGSKIVGEIXEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDN 317
Query: 363 WMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTI 422
W GLD GP S++ + + + T+KTVIWNGP GVFE FA G+ + +++ KG TI
Sbjct: 318 WXGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEXPNFAKGSIECLNLVVEVTKKGAITI 377
Query: 423 IGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
+GGGD+ +SH+STGGGASLELLEGKELPGV+AL
Sbjct: 378 VGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGKELPGVLAL 421
>pdb|1LTK|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
pdb|1LTK|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
pdb|1LTK|C Chain C, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
Length = 425
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/404 (46%), Positives = 246/404 (60%), Gaps = 22/404 (5%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGA-KVILSSHLGRPKGV- 139
D+K KKV VR D NVP++ N I D RI A +PTI HL + GA K+IL SH GRP G+
Sbjct: 22 DIKNKKVLVRVDFNVPIE-NGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLR 80
Query: 140 TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE--- 196
K++L P+ L LLG +V+ +DC+G EVE + + E V+LLEN+RF+ EEE
Sbjct: 81 NEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKG 140
Query: 197 -----------KNDPE-FAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLL 244
K D E F L LAD+++NDAFGTAHRAH+S GV +K S GFL
Sbjct: 141 VDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSXVGVKLNVKAS--GFLX 198
Query: 245 QKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-QG 303
+KEL+Y A+ +P+RP AI+GG+KVS KI +I++LL+ D ++GGG +TF K
Sbjct: 199 KKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRXIIGGGXAYTFKKVLNN 258
Query: 304 ISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSK-VVPATAIPDG 362
+G+SL +E V + LP D IAD F +AN+K V IPD
Sbjct: 259 XKIGTSLFDEAGSKIVGEIXEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDN 318
Query: 363 WMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTI 422
W GLD GP S++ + + + T+KTVIWNGP GVFE FA G+ + +++ KG TI
Sbjct: 319 WXGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEXPNFAKGSIECLNLVVEVTKKGAITI 378
Query: 423 IGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVAL 466
+GGGD+ +SH+STGGGASLELLEGKELPGV+AL
Sbjct: 379 VGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGKELPGVLAL 422
>pdb|13PK|A Chain A, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|13PK|B Chain B, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|13PK|C Chain C, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|13PK|D Chain D, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|16PK|A Chain A, Phosphoglycerate Kinase From Trypanosoma Brucei
Bisubstrate Analog
Length = 415
Score = 325 bits (832), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 247/419 (58%), Gaps = 28/419 (6%)
Query: 72 KKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSS 131
KKS+ E DLKGKKV +R D NVP+ N IT+D RIR+A+PT+K ++ G +L S
Sbjct: 2 KKSINE---CDLKGKKVLIRVDFNVPVK-NGKITNDYRIRSALPTLKKVLTEGGSCVLMS 57
Query: 132 HLGRPKGV-------------TPKF----SLAPLVPRLSELLGIQVVKADDCIGPEVEKL 174
HLGRPKG+ P F +L P+ RLSELL V A DC+ +
Sbjct: 58 HLGRPKGIPMAQAGKIRSTGGVPGFQQKATLKPVAKRLSELLLRPVTFAPDCL--NAADV 115
Query: 175 VASLPEGGVLLLENVRFYKEE----EKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEG 230
V+ + G V+LLENVRFYKEE K+ AK LAS D+Y++DAFGTAHR A+ G
Sbjct: 116 VSKMSPGDVVLLENVRFYKEEGSKKAKDREAMAKILASYGDVYISDAFGTAHRDSATMTG 175
Query: 231 VTKYLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLL 290
+ K L AG+L++KE+ Y + +P RP AIVGG+KVS KI +++++L+ D LL+
Sbjct: 176 IPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNMLQRIDYLLI 235
Query: 291 GGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDAN 350
GG M +TF KAQG S+G S EE V ++LP D V +F +
Sbjct: 236 GGAMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDS 295
Query: 351 SKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKK 410
+ IP+G M LDIGP +++ + + + K+ IWNGPMGVFE ++ GT AIAK
Sbjct: 296 PLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKA 355
Query: 411 LADLSGK-GVTTIIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDE 468
+ + + G+ +IIGGGDS MSH+STGGGASLELLEGK LPGV LD+
Sbjct: 356 MGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLELLEGKTLPGVTVLDD 414
>pdb|4FEY|A Chain A, An X-Ray Structure Of A Putative Phosphogylcerate Kinase
With Bound Adp From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 395
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/394 (43%), Positives = 239/394 (60%), Gaps = 14/394 (3%)
Query: 78 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK 137
L DLK KKV VR D NVP+ D + +T RI AA+PTI++++ G VIL SHLGRP
Sbjct: 9 LKDVDLKDKKVLVRVDFNVPVKDGK-VTSKVRIEAAIPTIQYILDQGGAVILMSHLGRPT 67
Query: 138 G--VTPKFSLAPLVPRLSELLGIQVVKADDCI-GPEVEKLVASLPEGGVLLLENVRFYKE 194
+FSL P+ LSE++ V A D + G +V+ G +++ ENVRF
Sbjct: 68 EGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDGVDVKA-------GEIVMCENVRFNSG 120
Query: 195 EEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGA 254
E+K+ + +KK+ASL D++V DAF TAHRA AST GV KY+ + AG LL E+ L A
Sbjct: 121 EKKSTDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKA 180
Query: 255 VSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEX 314
+ SPK+P AAIVGGSKVS+K+ V+ +LL+ +IL++GGG+ TF KA+G VG+SL E+
Sbjct: 181 LKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQD 240
Query: 315 XXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVK 374
GVN+ +P DV +A +F+ +A + + + + M LDIGP+S K
Sbjct: 241 LVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSDVVADEMILDIGPESQK 300
Query: 375 TFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXX 434
E L + T++WNGP+GVFEFD FA GT+A++ +A ++ GGGD+
Sbjct: 301 IIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAAIEK 357
Query: 435 XXXXXXMSHISTGGGASLELLEGKELPGVVALDE 468
+S+IST GGA LE LEGK+LP + L E
Sbjct: 358 FGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 391
>pdb|1FW8|A Chain A, Circularly Permuted Phosphoglycerate Kinase From Yeast:
Pgk P72
Length = 416
Score = 295 bits (755), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/343 (47%), Positives = 212/343 (61%), Gaps = 18/343 (5%)
Query: 142 KFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE----- 196
K+SLAP+ L LLG V +DC+GPEVE V + G V+LLEN+R++ EEE
Sbjct: 3 KYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKV 62
Query: 197 --------KND-PEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKE 247
K D +F +L+SLAD+Y+NDAFGTAHRAH+S G L AGFLL+KE
Sbjct: 63 DGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFD--LPQRAAGFLLEKE 120
Query: 248 LDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKA-QGISV 306
L Y A+ +P RPF AI+GG+KV+ KI +I++LL+ D +++GGGM FTF K + +
Sbjct: 121 LKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEI 180
Query: 307 GSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVP-ATAIPDGWMG 365
G S+ ++ GV ++LP D +IAD F+ DAN+K V IP GW G
Sbjct: 181 GDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQG 240
Query: 366 LDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGG 425
LD GP+S K F + KT++WNGP GVFEF+KFA GT+A+ ++ S G T IIGG
Sbjct: 241 LDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGG 300
Query: 426 GDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDE 468
GD+ +SH+STGGGASLELLEGKELPGV L E
Sbjct: 301 GDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 343
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Query: 82 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG 138
DLK K+VF+R D NVPL D + IT + RI AA+PTIK+++++ + V+L+SHLGRP G
Sbjct: 357 DLKDKRVFIRVDFNVPL-DGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRPNG 413
>pdb|4EHJ|A Chain A, An X-Ray Structure Of A Putative Phosphogylcerate Kinase
From Francisella Tularensis Subsp. Tularensis Schu S4
pdb|4EHJ|B Chain B, An X-Ray Structure Of A Putative Phosphogylcerate Kinase
From Francisella Tularensis Subsp. Tularensis Schu S4
Length = 392
Score = 295 bits (754), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 170/394 (43%), Positives = 237/394 (60%), Gaps = 14/394 (3%)
Query: 78 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK 137
L DLK KKV VR D NVP+ D + +T RI AA+PTI++++ G VIL SHLGRP
Sbjct: 6 LKDVDLKDKKVLVRVDFNVPVKDGK-VTSKVRIEAAIPTIQYILDQGGAVILXSHLGRPT 64
Query: 138 G--VTPKFSLAPLVPRLSELLGIQVVKADDCI-GPEVEKLVASLPEGGVLLLENVRFYKE 194
+FSL P+ LSE++ V A D + G +V+ G ++ ENVRF
Sbjct: 65 EGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDGVDVKA-------GEIVXCENVRFNSG 117
Query: 195 EEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGA 254
E+K+ + +KK+ASL D++V DAF TAHRA AST GV KY+ + AG LL E+ L A
Sbjct: 118 EKKSTDDLSKKIASLGDVFVXDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKA 177
Query: 255 VSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEX 314
+ SPK+P AAIVGGSKVS+K+ V+ +LL+ +IL++GGG+ TF KA+G VG+SL E+
Sbjct: 178 LKSPKKPXAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQD 237
Query: 315 XXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVK 374
GVN+ +P DV +A +F+ +A + + + + LDIGP+S K
Sbjct: 238 LVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSDVVADEXILDIGPESQK 297
Query: 375 TFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSXXXXXX 434
E L + T++WNGP+GVFEFD FA GT+A++ +A ++ GGGD+
Sbjct: 298 IIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAAIEK 354
Query: 435 XXXXXXMSHISTGGGASLELLEGKELPGVVALDE 468
+S+IST GGA LE LEGK+LP + L E
Sbjct: 355 FGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 388
>pdb|1ZMR|A Chain A, Crystal Structure Of The E. Coli Phosphoglycerate Kinase
Length = 387
Score = 284 bits (727), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 175/399 (43%), Positives = 239/399 (59%), Gaps = 21/399 (5%)
Query: 74 SVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHL 133
SV +++ DL GK+VF+RADLNVP+ D + +T D RIRA++PTI+ ++ GAKV+++SHL
Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDGK-VTSDARIRASLPTIELALKQGAKVMVTSHL 60
Query: 134 GRPKG--VTPKFSLAPLVPRLSELLG--IQVVKADDCIGPEVEKLVASLPEGGVLLLENV 189
GRP +FSL P+V L + L +++VK D G +V EG +++LENV
Sbjct: 61 GRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVK-DYLDGVDV-------AEGELVVLENV 112
Query: 190 RFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELD 249
RF K E+K+D +KK A+L D++V DAFGTAHRA AST G+ K+ + AG LL ELD
Sbjct: 113 RFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELD 172
Query: 250 YLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSS 309
L A+ P RP AIVGGSKVS+K+ V++SL + D L++GGG+ TF AQG VG S
Sbjct: 173 ALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFIAAQGHDVGKS 232
Query: 310 LVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIG 369
L E N+ +PSDV +A +F+ A + + + LDIG
Sbjct: 233 LYEADLVDEAKRLLTT-----CNIPVPSDVRVATEFSETAPATLKSVNDVKADEQILDIG 287
Query: 370 PDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSX 429
S + E L KT++WNGP+GVFEF F GTE +A +AD +I GGGD+
Sbjct: 288 DASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTL 344
Query: 430 XXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALDE 468
+S+ISTGGGA LE +EGK LP V L+E
Sbjct: 345 AAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
>pdb|2CUN|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Pyrococcus Horikoshii Ot3
pdb|2CUN|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Pyrococcus Horikoshii Ot3
Length = 410
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 207/406 (50%), Gaps = 26/406 (6%)
Query: 78 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK 137
L + K VF+R DLN P+ D + I D R +A +PTI++LI++GAKV++ +H G+P
Sbjct: 4 LEDFNFHNKTVFLRVDLNSPMKDGK-IISDARFKAVLPTIRYLIESGAKVVIGTHQGKP- 61
Query: 138 GVTPKFSLAPLVPR-LSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE 196
+ ++ R LSELL V +D G + + L G V +LEN+RF EE
Sbjct: 62 -YSEDYTTTEEHARVLSELLDQHVEYIEDIFGRYAREKIKELKSGEVAILENLRFSAEEV 120
Query: 197 KNDP-------EFAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELD 249
KN P KKL+ + D VNDAF TAHR+ S G + +KP + GFL++KE++
Sbjct: 121 KNKPIEECEKTFLVKKLSKVIDYVVNDAFATAHRSQPSLVGFAR-IKPMIMGFLMEKEIE 179
Query: 250 YLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLL--ETCDILLLGGGMIFTFYKAQGISVG 307
L+ A S P ++GG+KV + V+E++L E D++L GG + F A+G +G
Sbjct: 180 ALMRAYYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANVFTLAKGFDLG 239
Query: 308 SSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDG----- 362
VE ++ P D FA D + V + +
Sbjct: 240 RKNVEFMKKKGLLDYVKHAEEI-LDEFYPYIRTPVD-FAVDYKGERVEIDLLSENRGLLH 297
Query: 363 -WMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTT 421
+ +DIG + + + E L + ++ NGPMGVFE ++FA+GT + K +AD +
Sbjct: 298 QYQIMDIGKRTAEKYREILMKARIIVANGPMGVFEREEFAIGTVEVFKAIADSPA---FS 354
Query: 422 IIGGGDSXXXXXXXXXXXXMSHISTGGGASLELLEGKELPGVVALD 467
++GGG S ++HISTGGGA L G+ELP + AL
Sbjct: 355 VLGGGHS-IASIQKYGITGITHISTGGGAMLSFFAGEELPVLRALQ 399
>pdb|1DXJ|A Chain A, Structure Of The Chitinase From Jack Bean
Length = 242
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 195 EEKNDPEFAKKLASLADLYVNDAFGTAHRAHAS--TEGVTKYLKPSVAGFLLQKELDYLV 252
+ +NDP K Y +AF TA R+ T G T K VA FL Q +
Sbjct: 16 KHRNDPACEGK-----GFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQTSHETTG 70
Query: 253 GAVSSPKRPFA 263
GA SP P+A
Sbjct: 71 GAAGSPDGPYA 81
>pdb|2IYO|A Chain A, Structural Characterization Of A Bacterial 6pdh Reveals
Aspects Of Specificity, Mechanism And Mode Of Inhibition
Length = 472
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 222 HRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESL 281
+R + TE V K + + K L+ VG++ P+R + G+ + I + L
Sbjct: 33 NRTTSKTEEVFK--EHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPL 90
Query: 282 LETCDILLLGGGMIF 296
L+ DIL+ GG F
Sbjct: 91 LDIGDILIDGGNTHF 105
>pdb|2IYP|A Chain A, Product Rup
pdb|2IYP|B Chain B, Product Rup
pdb|2IYP|C Chain C, Product Rup
Length = 473
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 222 HRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESL 281
+R + TE V K + + K L+ VG++ P+R + G+ + I + L
Sbjct: 34 NRTTSKTEEVFK--EHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPL 91
Query: 282 LETCDILLLGGGMIF 296
L+ DIL+ GG F
Sbjct: 92 LDIGDILIDGGNTHF 106
>pdb|2IZ0|A Chain A, Pex Inhibitor-Home Data
pdb|2IZ0|B Chain B, Pex Inhibitor-Home Data
pdb|2IZ0|C Chain C, Pex Inhibitor-Home Data
pdb|2IZ1|A Chain A, 6pdh Complexed With Pex Inhibitor Synchrotron Data
pdb|2IZ1|B Chain B, 6pdh Complexed With Pex Inhibitor Synchrotron Data
pdb|2IZ1|C Chain C, 6pdh Complexed With Pex Inhibitor Synchrotron Data
Length = 474
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 222 HRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESL 281
+R + TE V K + + K L+ VG++ P+R + G+ + I + L
Sbjct: 35 NRTTSKTEEVFK--EHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPL 92
Query: 282 LETCDILLLGGGMIF 296
L+ DIL+ GG F
Sbjct: 93 LDIGDILIDGGNTHF 107
>pdb|3W3E|A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation
Activity Of The Plant Cell Wall
pdb|3W3E|B Chain B, Structure Of Vigna Unguiculata Chitinase With Regulation
Activity Of The Plant Cell Wall
Length = 242
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 212 LYVNDAFGTAHRAHAS--TEGVTKYLKPSVAGFLLQKELDYLVGAVSSPKRPFA 263
Y +AF TA R+ A+ T G + K VA FL Q + GA +SP P+A
Sbjct: 29 FYSYNAFITAARSFAAFGTTGDSNTRKREVAAFLAQTSHETTGGAATSPDGPYA 82
>pdb|3L44|A Chain A, Crystal Structure Of Bacillus Anthracis Heml-1, Glutamate
Semialdehyde Aminotransferase
pdb|3L44|B Chain B, Crystal Structure Of Bacillus Anthracis Heml-1, Glutamate
Semialdehyde Aminotransferase
Length = 434
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 244 LQKE-LDYLVGAVSSPKRPFAAIVGGSKVSSKIG 276
L KE L+++VG V+SP R F A+ GG+ ++ + G
Sbjct: 11 LHKEALEHIVGGVNSPSRSFKAVGGGAPIAXERG 44
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,224,913
Number of Sequences: 62578
Number of extensions: 483938
Number of successful extensions: 1506
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1300
Number of HSP's gapped (non-prelim): 38
length of query: 474
length of database: 14,973,337
effective HSP length: 102
effective length of query: 372
effective length of database: 8,590,381
effective search space: 3195621732
effective search space used: 3195621732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)