Query 011945
Match_columns 474
No_of_seqs 563 out of 2210
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 06:57:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011945.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011945hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1163 Casein kinase (serine/ 100.0 6.5E-59 1.4E-63 423.7 21.5 295 3-297 11-305 (341)
2 KOG1165 Casein kinase (serine/ 100.0 1.3E-57 2.9E-62 431.9 24.2 291 4-294 25-317 (449)
3 KOG0581 Mitogen-activated prot 100.0 2.6E-49 5.6E-54 382.4 20.1 254 7-280 79-340 (364)
4 KOG0615 Serine/threonine prote 100.0 2.4E-49 5.2E-54 385.2 16.9 260 4-279 169-441 (475)
5 KOG0592 3-phosphoinositide-dep 100.0 4.4E-48 9.6E-53 387.5 25.3 270 5-296 71-352 (604)
6 KOG0575 Polo-like serine/threo 100.0 8.6E-48 1.9E-52 391.3 25.3 256 7-285 18-279 (592)
7 KOG0598 Ribosomal protein S6 k 100.0 3.4E-48 7.3E-53 374.5 20.2 266 6-300 24-299 (357)
8 KOG0595 Serine/threonine-prote 100.0 3.1E-48 6.7E-53 377.9 19.9 251 3-268 6-264 (429)
9 KOG0591 NIMA (never in mitosis 100.0 3.4E-48 7.4E-53 360.6 9.9 243 7-266 19-275 (375)
10 KOG0192 Tyrosine kinase specif 100.0 1.3E-45 2.8E-50 371.2 22.8 256 7-280 41-307 (362)
11 KOG0593 Predicted protein kina 100.0 3.5E-46 7.5E-51 350.3 16.5 253 7-270 2-282 (396)
12 KOG0600 Cdc2-related protein k 100.0 9E-46 1.9E-50 368.3 18.7 259 3-270 113-398 (560)
13 KOG0661 MAPK related serine/th 100.0 2.1E-46 4.5E-51 370.4 13.9 264 4-281 7-297 (538)
14 KOG0616 cAMP-dependent protein 100.0 1.9E-45 4.2E-50 344.7 17.9 270 5-302 42-317 (355)
15 KOG0198 MEKK and related serin 100.0 1.5E-45 3.3E-50 360.9 18.0 260 7-281 17-282 (313)
16 KOG0583 Serine/threonine prote 100.0 2.8E-44 6E-49 364.3 27.3 247 4-270 14-273 (370)
17 KOG0605 NDR and related serine 100.0 1.6E-44 3.4E-49 362.3 20.2 273 6-295 140-458 (550)
18 KOG0197 Tyrosine kinases [Sign 100.0 2.1E-44 4.6E-49 362.8 18.5 253 9-279 208-464 (468)
19 KOG0694 Serine/threonine prote 100.0 7E-44 1.5E-48 366.6 21.9 272 5-306 366-648 (694)
20 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.3E-43 2.7E-48 357.4 23.4 261 5-279 5-337 (338)
21 KOG0578 p21-activated serine/t 100.0 1E-43 2.2E-48 358.9 16.9 253 7-280 273-528 (550)
22 cd05631 STKc_GRK4 Catalytic do 100.0 3E-42 6.5E-47 339.3 25.1 268 8-298 1-277 (285)
23 KOG0597 Serine-threonine prote 100.0 1.6E-43 3.5E-48 355.0 16.2 252 7-281 2-257 (808)
24 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5E-42 1.1E-46 338.3 26.6 253 7-270 5-283 (288)
25 cd05587 STKc_cPKC Catalytic do 100.0 5E-42 1.1E-46 344.2 26.2 240 8-266 1-246 (324)
26 KOG0201 Serine/threonine prote 100.0 3.3E-44 7.1E-49 352.2 10.0 254 6-281 12-269 (467)
27 KOG0588 Serine/threonine prote 100.0 7.1E-43 1.5E-47 356.7 20.0 252 6-281 11-269 (786)
28 KOG0582 Ste20-like serine/thre 100.0 4.5E-42 9.8E-47 337.3 24.9 266 4-281 23-299 (516)
29 PTZ00263 protein kinase A cata 100.0 5.5E-42 1.2E-46 344.7 26.0 238 6-266 17-260 (329)
30 KOG0663 Protein kinase PITSLRE 100.0 6.4E-43 1.4E-47 332.2 18.0 253 7-270 76-359 (419)
31 cd05612 STKc_PRKX_like Catalyt 100.0 3.9E-42 8.4E-47 339.7 24.1 236 7-265 1-242 (291)
32 KOG0659 Cdk activating kinase 100.0 1.1E-42 2.4E-47 321.8 18.6 253 7-270 2-279 (318)
33 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9.9E-42 2.2E-46 342.9 26.8 255 8-270 1-288 (338)
34 cd07848 STKc_CDKL5 Catalytic d 100.0 1.1E-41 2.3E-46 334.9 26.0 254 7-270 1-282 (287)
35 KOG0667 Dual-specificity tyros 100.0 1.6E-42 3.5E-47 356.2 20.5 210 4-224 183-399 (586)
36 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.8E-41 6E-46 335.2 28.5 252 6-270 4-286 (303)
37 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.4E-42 9.4E-47 345.8 22.9 246 7-270 1-255 (333)
38 cd05096 PTKc_DDR1 Catalytic do 100.0 1.3E-41 2.8E-46 337.6 25.6 261 5-274 3-303 (304)
39 PTZ00036 glycogen synthase kin 100.0 2E-41 4.4E-46 353.7 28.1 254 5-270 64-349 (440)
40 KOG0660 Mitogen-activated prot 100.0 2.2E-42 4.7E-47 333.0 18.7 262 5-278 20-313 (359)
41 KOG0193 Serine/threonine prote 100.0 5E-43 1.1E-47 355.1 14.8 257 6-278 391-655 (678)
42 cd07862 STKc_CDK6 Catalytic do 100.0 2.5E-41 5.4E-46 332.8 26.3 254 7-271 1-286 (290)
43 PHA02882 putative serine/threo 100.0 4.1E-41 8.9E-46 333.0 28.0 261 2-273 7-293 (294)
44 cd05571 STKc_PKB Catalytic dom 100.0 1.5E-41 3.3E-46 340.6 25.2 252 13-294 1-263 (323)
45 cd05616 STKc_cPKC_beta Catalyt 100.0 1.6E-41 3.5E-46 340.3 25.3 263 8-296 1-271 (323)
46 cd05614 STKc_MSK2_N N-terminal 100.0 3.1E-41 6.7E-46 339.3 26.8 253 8-275 1-267 (332)
47 PTZ00284 protein kinase; Provi 100.0 2E-41 4.4E-46 356.6 25.7 254 6-270 128-436 (467)
48 KOG0589 Serine/threonine prote 100.0 1.6E-42 3.5E-47 348.0 16.1 250 6-272 3-258 (426)
49 cd05106 PTKc_CSF-1R Catalytic 100.0 2.8E-41 6E-46 345.6 24.6 257 7-277 38-373 (374)
50 cd05615 STKc_cPKC_alpha Cataly 100.0 4.5E-41 9.7E-46 337.3 25.6 264 8-295 1-270 (323)
51 KOG0610 Putative serine/threon 100.0 9E-42 2E-46 332.8 19.4 269 7-295 77-405 (459)
52 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-40 2.4E-45 334.4 27.8 232 13-264 1-238 (323)
53 cd05592 STKc_nPKC_theta_delta 100.0 7.3E-41 1.6E-45 334.7 26.0 236 13-267 1-242 (316)
54 cd05589 STKc_PKN Catalytic dom 100.0 1.4E-40 3.1E-45 333.6 28.0 239 9-267 1-247 (324)
55 KOG0585 Ca2+/calmodulin-depend 100.0 5.2E-42 1.1E-46 338.8 17.1 254 4-270 94-370 (576)
56 PHA03212 serine/threonine kina 100.0 7.4E-41 1.6E-45 344.3 26.3 250 6-270 91-374 (391)
57 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.2E-41 1.1E-45 326.9 23.8 254 6-276 4-265 (266)
58 cd05585 STKc_YPK1_like Catalyt 100.0 1.7E-41 3.7E-46 338.5 20.6 243 15-277 1-249 (312)
59 cd07876 STKc_JNK2 Catalytic do 100.0 7.4E-41 1.6E-45 340.4 25.3 253 4-270 18-313 (359)
60 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.8E-40 3.9E-45 330.3 27.4 254 6-270 5-284 (309)
61 cd05628 STKc_NDR1 Catalytic do 100.0 1E-40 2.2E-45 340.0 26.3 269 7-295 1-306 (363)
62 cd05591 STKc_nPKC_epsilon Cata 100.0 6.2E-41 1.4E-45 335.8 24.0 260 13-294 1-266 (321)
63 cd05590 STKc_nPKC_eta Catalyti 100.0 6.6E-41 1.4E-45 335.6 24.1 260 13-295 1-266 (320)
64 cd05620 STKc_nPKC_delta Cataly 100.0 1E-40 2.2E-45 333.7 25.5 236 13-267 1-242 (316)
65 PTZ00426 cAMP-dependent protei 100.0 9.4E-41 2E-45 337.4 25.4 257 6-295 29-297 (340)
66 cd06650 PKc_MEK1 Catalytic dom 100.0 1.2E-40 2.6E-45 335.7 26.1 271 5-292 3-317 (333)
67 KOG0658 Glycogen synthase kina 100.0 9.9E-42 2.2E-46 329.0 16.7 251 8-270 25-304 (364)
68 cd07863 STKc_CDK4 Catalytic do 100.0 2.5E-40 5.3E-45 325.1 26.8 252 8-270 1-283 (288)
69 PTZ00283 serine/threonine prot 100.0 1E-40 2.3E-45 352.9 25.9 253 4-271 29-296 (496)
70 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.8E-41 6E-46 341.7 20.4 255 7-271 1-284 (350)
71 KOG0596 Dual specificity; seri 100.0 5.8E-42 1.3E-46 343.6 15.0 251 6-270 360-625 (677)
72 cd05104 PTKc_Kit Catalytic dom 100.0 9.8E-41 2.1E-45 341.8 24.5 256 7-276 35-374 (375)
73 cd05601 STKc_CRIK Catalytic do 100.0 6.9E-41 1.5E-45 336.5 22.9 248 7-269 1-260 (330)
74 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-40 2.9E-45 334.6 25.0 238 13-270 1-249 (328)
75 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.1E-41 1.5E-45 336.4 22.9 264 13-296 1-274 (327)
76 cd05602 STKc_SGK1 Catalytic do 100.0 1E-40 2.3E-45 334.7 23.9 257 13-295 1-264 (325)
77 cd06649 PKc_MEK2 Catalytic dom 100.0 2E-40 4.3E-45 333.6 26.0 259 5-280 3-306 (331)
78 cd05618 STKc_aPKC_iota Catalyt 100.0 1.8E-40 3.8E-45 333.9 25.5 264 13-296 1-276 (329)
79 KOG1989 ARK protein kinase fam 100.0 9.2E-41 2E-45 353.1 24.3 262 7-281 37-316 (738)
80 cd05599 STKc_NDR_like Catalyti 100.0 6.6E-41 1.4E-45 341.2 22.2 270 7-293 1-307 (364)
81 cd05054 PTKc_VEGFR Catalytic d 100.0 1.5E-40 3.2E-45 335.6 24.5 260 6-279 6-336 (337)
82 cd05605 STKc_GRK4_like Catalyt 100.0 2.3E-40 4.9E-45 325.9 25.1 262 8-295 1-274 (285)
83 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-40 3.1E-45 337.4 24.0 254 4-271 32-292 (382)
84 cd05597 STKc_DMPK_like Catalyt 100.0 5.4E-40 1.2E-44 330.6 28.0 265 7-294 1-278 (331)
85 cd05575 STKc_SGK Catalytic dom 100.0 3E-40 6.5E-45 331.1 26.0 256 13-294 1-263 (323)
86 cd05588 STKc_aPKC Catalytic do 100.0 1E-40 2.2E-45 335.6 22.6 259 13-294 1-274 (329)
87 cd05598 STKc_LATS Catalytic do 100.0 2.4E-40 5.2E-45 338.7 25.6 253 7-269 1-298 (376)
88 cd05629 STKc_NDR_like_fungal C 100.0 2.8E-40 6.1E-45 338.4 25.4 253 7-269 1-302 (377)
89 cd05626 STKc_LATS2 Catalytic d 100.0 4E-40 8.7E-45 337.9 26.5 255 7-270 1-303 (381)
90 cd07875 STKc_JNK1 Catalytic do 100.0 3.1E-40 6.7E-45 336.5 25.4 249 5-270 22-316 (364)
91 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.4E-40 3.1E-45 336.0 22.4 252 4-270 12-296 (343)
92 KOG0594 Protein kinase PCTAIRE 100.0 1E-40 2.2E-45 322.2 20.1 254 8-271 12-301 (323)
93 cd05608 STKc_GRK1 Catalytic do 100.0 3.9E-40 8.5E-45 323.4 24.7 236 15-266 1-246 (280)
94 PLN00034 mitogen-activated pro 100.0 1.5E-40 3.3E-45 337.4 22.4 246 6-271 73-327 (353)
95 KOG0033 Ca2+/calmodulin-depend 100.0 1.3E-42 2.9E-47 317.6 6.4 259 4-279 8-271 (355)
96 KOG4279 Serine/threonine prote 100.0 5.7E-41 1.2E-45 342.4 19.0 250 14-281 582-838 (1226)
97 cd05623 STKc_MRCK_alpha Cataly 100.0 7E-40 1.5E-44 329.8 26.8 265 7-294 1-278 (332)
98 cd07874 STKc_JNK3 Catalytic do 100.0 4.1E-40 8.9E-45 334.3 25.2 253 4-270 14-309 (355)
99 cd05048 PTKc_Ror Catalytic Dom 100.0 2.5E-40 5.5E-45 324.2 22.8 254 6-275 4-282 (283)
100 cd05624 STKc_MRCK_beta Catalyt 100.0 1.9E-40 4.1E-45 333.9 22.4 267 7-294 1-278 (331)
101 cd05619 STKc_nPKC_theta Cataly 100.0 4.9E-40 1.1E-44 328.8 24.7 236 13-267 1-242 (316)
102 cd05109 PTKc_HER2 Catalytic do 100.0 7.1E-40 1.5E-44 320.8 25.3 261 1-278 1-270 (279)
103 cd05570 STKc_PKC Catalytic dom 100.0 3.6E-40 7.8E-45 329.9 23.7 235 13-266 1-241 (318)
104 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.9E-40 1.3E-44 338.3 25.9 258 6-277 36-398 (400)
105 cd05052 PTKc_Abl Catalytic dom 100.0 5.8E-40 1.3E-44 318.6 24.1 255 6-277 5-263 (263)
106 PHA02988 hypothetical protein; 100.0 7.9E-40 1.7E-44 322.2 25.3 243 13-277 26-280 (283)
107 cd05627 STKc_NDR2 Catalytic do 100.0 2E-40 4.4E-45 337.4 21.6 271 7-294 1-305 (360)
108 cd05596 STKc_ROCK Catalytic do 100.0 3.6E-40 7.8E-45 337.0 23.5 248 6-269 42-301 (370)
109 cd05594 STKc_PKB_alpha Catalyt 100.0 1.8E-40 4E-45 332.9 20.7 238 13-270 1-250 (325)
110 cd07868 STKc_CDK8 Catalytic do 100.0 1.5E-39 3.3E-44 324.5 27.1 256 12-271 6-313 (317)
111 PHA03207 serine/threonine kina 100.0 8.6E-40 1.9E-44 336.7 26.1 255 4-271 89-374 (392)
112 cd07853 STKc_NLK Catalytic dom 100.0 6.2E-40 1.3E-44 335.3 24.7 257 8-277 1-290 (372)
113 cd05082 PTKc_Csk Catalytic dom 100.0 5E-40 1.1E-44 317.6 22.7 247 7-275 6-255 (256)
114 cd05625 STKc_LATS1 Catalytic d 100.0 5.6E-40 1.2E-44 336.8 24.2 270 7-293 1-316 (382)
115 cd05582 STKc_RSK_N N-terminal 100.0 1.7E-40 3.8E-45 332.0 19.9 256 12-294 1-266 (318)
116 KOG4721 Serine/threonine prote 100.0 2.4E-41 5.2E-46 339.2 13.1 238 11-274 128-366 (904)
117 cd05071 PTKc_Src Catalytic dom 100.0 1.3E-39 2.9E-44 316.3 24.8 254 5-277 4-261 (262)
118 cd05607 STKc_GRK7 Catalytic do 100.0 7E-40 1.5E-44 321.2 22.7 259 15-295 1-267 (277)
119 PTZ00267 NIMA-related protein 100.0 1.4E-39 2.9E-44 343.5 26.6 249 7-271 67-322 (478)
120 cd05108 PTKc_EGFR Catalytic do 100.0 1.1E-39 2.4E-44 325.7 24.6 258 5-279 5-271 (316)
121 cd05089 PTKc_Tie1 Catalytic do 100.0 1.8E-39 4E-44 321.3 25.2 257 7-281 2-280 (297)
122 cd05103 PTKc_VEGFR2 Catalytic 100.0 1E-39 2.3E-44 330.1 24.0 260 6-279 6-342 (343)
123 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.2E-39 4.7E-44 322.2 25.8 261 6-281 17-304 (307)
124 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.1E-39 6.7E-44 320.1 26.7 255 6-271 5-285 (301)
125 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-39 2.3E-44 327.4 23.6 235 13-267 1-242 (325)
126 KOG1164 Casein kinase (serine/ 100.0 7.8E-39 1.7E-43 321.0 29.8 288 4-294 14-315 (322)
127 KOG0611 Predicted serine/threo 100.0 7.1E-41 1.5E-45 324.5 14.4 252 5-281 51-309 (668)
128 cd05584 STKc_p70S6K Catalytic 100.0 1.2E-39 2.5E-44 327.0 23.8 239 12-270 1-254 (323)
129 cd05049 PTKc_Trk Catalytic dom 100.0 8.9E-40 1.9E-44 319.6 22.1 253 6-274 4-279 (280)
130 PTZ00266 NIMA-related protein 100.0 1.1E-38 2.4E-43 350.3 33.2 254 3-271 9-294 (1021)
131 cd05603 STKc_SGK2 Catalytic do 100.0 3E-39 6.4E-44 323.5 26.2 255 13-294 1-263 (321)
132 cd05072 PTKc_Lyn Catalytic dom 100.0 1.3E-39 2.7E-44 315.5 22.8 253 6-276 5-261 (261)
133 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.9E-39 4E-44 317.7 24.1 256 6-274 5-276 (277)
134 cd05621 STKc_ROCK2 Catalytic d 100.0 9.2E-40 2E-44 333.9 22.5 250 5-270 41-302 (370)
135 cd05632 STKc_GRK5 Catalytic do 100.0 3.5E-39 7.5E-44 317.5 25.8 244 8-267 1-251 (285)
136 cd05093 PTKc_TrkB Catalytic do 100.0 3.2E-39 7E-44 317.9 25.5 258 6-279 4-282 (288)
137 cd05062 PTKc_IGF-1R Catalytic 100.0 2E-39 4.4E-44 317.2 23.7 255 4-274 3-276 (277)
138 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.1E-39 6.7E-44 312.1 24.6 249 7-273 4-255 (256)
139 cd08228 STKc_Nek6 Catalytic do 100.0 5.6E-39 1.2E-43 311.8 26.5 255 7-276 2-265 (267)
140 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.4E-39 7.3E-44 316.7 25.2 260 6-277 2-282 (283)
141 cd05586 STKc_Sck1_like Catalyt 100.0 1.4E-39 3E-44 327.2 22.8 234 15-266 1-243 (330)
142 cd06646 STKc_MAP4K5 Catalytic 100.0 1.7E-39 3.7E-44 315.7 22.7 254 3-271 5-264 (267)
143 PF00069 Pkinase: Protein kina 100.0 2.3E-39 5.1E-44 312.5 23.4 248 9-271 1-256 (260)
144 cd05094 PTKc_TrkC Catalytic do 100.0 3.3E-39 7.1E-44 318.4 25.0 259 6-280 4-286 (291)
145 cd05630 STKc_GRK6 Catalytic do 100.0 3.6E-39 7.9E-44 317.5 25.1 242 8-265 1-249 (285)
146 cd05090 PTKc_Ror1 Catalytic do 100.0 2.7E-39 5.8E-44 317.3 24.1 253 7-275 5-282 (283)
147 cd05035 PTKc_Axl_like Catalyti 100.0 2E-39 4.3E-44 315.5 22.9 253 9-276 1-272 (273)
148 cd05622 STKc_ROCK1 Catalytic d 100.0 1.9E-39 4E-44 331.8 23.7 252 6-277 42-306 (371)
149 cd05075 PTKc_Axl Catalytic dom 100.0 2.5E-39 5.5E-44 315.1 23.6 253 9-276 1-271 (272)
150 cd05033 PTKc_EphR Catalytic do 100.0 3.8E-39 8.2E-44 313.2 24.7 255 6-276 3-265 (266)
151 cd05088 PTKc_Tie2 Catalytic do 100.0 2.3E-39 5E-44 321.7 23.5 258 6-281 6-285 (303)
152 cd05115 PTKc_Zap-70 Catalytic 100.0 3.2E-39 6.9E-44 312.9 23.8 248 14-277 2-256 (257)
153 cd05043 PTK_Ryk Pseudokinase d 100.0 4.1E-39 8.8E-44 315.4 24.5 260 5-279 4-279 (280)
154 PHA03211 serine/threonine kina 100.0 2.8E-39 6.1E-44 337.9 24.6 253 5-271 167-454 (461)
155 cd05116 PTKc_Syk Catalytic dom 100.0 3.5E-39 7.5E-44 312.1 23.3 246 14-276 2-255 (257)
156 cd05068 PTKc_Frk_like Catalyti 100.0 5.9E-39 1.3E-43 311.0 24.8 254 5-276 4-261 (261)
157 cd05045 PTKc_RET Catalytic dom 100.0 4.3E-39 9.3E-44 317.2 24.1 256 8-279 1-289 (290)
158 cd07861 STKc_CDK1_euk Catalyti 100.0 1.1E-38 2.4E-43 312.7 26.8 253 8-271 1-281 (285)
159 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.7E-39 8.1E-44 312.2 23.2 253 4-275 3-259 (260)
160 KOG4717 Serine/threonine prote 100.0 7E-40 1.5E-44 325.4 18.1 249 3-270 14-268 (864)
161 cd05053 PTKc_FGFR Catalytic do 100.0 4.3E-39 9.4E-44 317.3 23.8 257 6-277 11-292 (293)
162 PHA03209 serine/threonine kina 100.0 5.9E-39 1.3E-43 326.5 25.5 249 6-270 65-349 (357)
163 cd05051 PTKc_DDR Catalytic dom 100.0 3.1E-39 6.7E-44 318.6 22.5 257 6-274 4-295 (296)
164 cd06637 STKc_TNIK Catalytic do 100.0 5.8E-39 1.3E-43 312.5 24.2 251 5-271 4-268 (272)
165 cd05055 PTKc_PDGFR Catalytic d 100.0 1.1E-38 2.4E-43 316.8 26.6 257 6-276 34-301 (302)
166 KOG1026 Nerve growth factor re 100.0 4.5E-40 9.7E-45 346.5 17.4 258 7-280 486-766 (774)
167 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.7E-39 1.7E-43 317.7 25.3 260 5-279 13-299 (304)
168 cd06613 STKc_MAP4K3_like Catal 100.0 1.2E-38 2.5E-43 308.2 25.9 252 6-271 2-259 (262)
169 cd08223 STKc_Nek4 Catalytic do 100.0 7.2E-39 1.6E-43 309.0 24.4 247 8-271 1-253 (257)
170 cd08219 STKc_Nek3 Catalytic do 100.0 6.2E-39 1.3E-43 309.6 23.9 246 8-271 1-251 (255)
171 cd05069 PTKc_Yes Catalytic dom 100.0 7.2E-39 1.6E-43 310.4 24.5 252 5-275 4-259 (260)
172 cd05091 PTKc_Ror2 Catalytic do 100.0 2E-39 4.4E-44 318.0 20.8 253 7-275 5-282 (283)
173 KOG4278 Protein tyrosine kinas 100.0 2.1E-39 4.5E-44 327.6 21.1 258 8-282 268-529 (1157)
174 KOG0574 STE20-like serine/thre 100.0 5.2E-42 1.1E-46 321.6 2.1 257 9-284 35-292 (502)
175 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.8E-39 1.3E-43 330.9 25.0 257 7-277 37-400 (401)
176 cd05061 PTKc_InsR Catalytic do 100.0 1.2E-38 2.5E-43 314.0 26.0 257 5-277 4-279 (288)
177 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.3E-38 2.7E-43 320.8 26.7 261 6-281 11-298 (334)
178 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.3E-38 2.7E-43 308.8 25.8 255 7-276 2-265 (267)
179 cd07839 STKc_CDK5 Catalytic do 100.0 6.5E-39 1.4E-43 314.4 24.0 251 8-271 1-280 (284)
180 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.9E-39 1.1E-43 311.2 22.8 250 6-273 3-255 (256)
181 cd05084 PTKc_Fes Catalytic dom 100.0 6.7E-39 1.5E-43 308.8 23.6 246 13-274 1-251 (252)
182 cd05057 PTKc_EGFR_like Catalyt 100.0 1.1E-38 2.3E-43 312.4 25.4 262 1-279 1-271 (279)
183 cd05097 PTKc_DDR_like Catalyti 100.0 4.7E-39 1E-43 317.9 23.0 259 7-274 5-294 (295)
184 cd05111 PTK_HER3 Pseudokinase 100.0 9.2E-39 2E-43 313.4 24.7 256 6-278 6-270 (279)
185 cd05095 PTKc_DDR2 Catalytic do 100.0 7E-39 1.5E-43 316.8 24.0 260 6-274 4-295 (296)
186 cd07867 STKc_CDC2L6 Catalytic 100.0 7.3E-39 1.6E-43 319.2 24.3 256 12-271 6-313 (317)
187 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-38 2.3E-43 310.5 24.6 256 6-276 3-266 (267)
188 cd05059 PTKc_Tec_like Catalyti 100.0 6.6E-39 1.4E-43 310.0 23.0 249 7-273 4-255 (256)
189 KOG0580 Serine/threonine prote 100.0 5E-40 1.1E-44 300.1 14.2 250 6-279 21-277 (281)
190 cd08529 STKc_FA2-like Catalyti 100.0 2.4E-38 5.3E-43 304.9 26.8 246 8-271 1-252 (256)
191 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.1E-39 1.3E-43 310.8 22.6 253 4-275 3-259 (260)
192 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.6E-38 3.5E-43 317.1 26.2 260 6-280 11-297 (314)
193 cd07837 STKc_CdkB_plant Cataly 100.0 2.4E-38 5.1E-43 312.1 27.0 252 7-270 1-289 (295)
194 cd08229 STKc_Nek7 Catalytic do 100.0 9.2E-39 2E-43 310.3 23.7 255 7-276 2-265 (267)
195 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.2E-39 7E-44 312.4 19.9 251 6-275 5-260 (261)
196 cd06625 STKc_MEKK3_like Cataly 100.0 1.6E-38 3.5E-43 307.6 24.7 250 7-271 2-259 (263)
197 PRK13184 pknD serine/threonine 100.0 2.6E-38 5.7E-43 346.0 29.1 263 7-279 2-293 (932)
198 cd05065 PTKc_EphR_B Catalytic 100.0 1.6E-38 3.5E-43 309.3 24.5 258 6-276 3-268 (269)
199 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-38 2.4E-43 312.7 23.5 244 7-271 1-252 (279)
200 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-38 2.8E-43 311.8 24.0 249 7-271 1-260 (283)
201 cd05063 PTKc_EphR_A2 Catalytic 100.0 2E-38 4.3E-43 308.3 24.9 257 5-276 3-267 (268)
202 KOG1187 Serine/threonine prote 100.0 6.4E-39 1.4E-43 324.4 22.1 258 7-277 75-353 (361)
203 KOG0577 Serine/threonine prote 100.0 1.7E-40 3.6E-45 334.3 10.4 241 9-270 28-276 (948)
204 cd05058 PTKc_Met_Ron Catalytic 100.0 1.7E-38 3.6E-43 307.6 24.1 253 13-278 1-261 (262)
205 cd06645 STKc_MAP4K3 Catalytic 100.0 7.1E-39 1.5E-43 311.3 21.4 251 6-271 8-264 (267)
206 PF07714 Pkinase_Tyr: Protein 100.0 7.4E-39 1.6E-43 310.9 21.4 248 10-273 2-259 (259)
207 cd05083 PTKc_Chk Catalytic dom 100.0 9.1E-39 2E-43 308.4 21.7 246 6-275 5-253 (254)
208 cd05032 PTKc_InsR_like Catalyt 100.0 1.3E-38 2.8E-43 310.9 23.0 254 5-274 4-276 (277)
209 KOG2345 Serine/threonine prote 100.0 5E-40 1.1E-44 301.4 12.1 265 6-277 20-301 (302)
210 KOG0690 Serine/threonine prote 100.0 3.4E-40 7.3E-45 312.2 11.2 268 5-299 166-441 (516)
211 cd07849 STKc_ERK1_2_like Catal 100.0 2E-38 4.2E-43 319.6 24.8 258 5-271 3-291 (336)
212 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.4E-38 3.1E-43 311.9 23.0 250 6-271 15-278 (282)
213 cd07831 STKc_MOK Catalytic dom 100.0 4.3E-38 9.4E-43 307.8 26.3 251 9-271 1-278 (282)
214 cd07847 STKc_CDKL1_4 Catalytic 100.0 6.2E-38 1.3E-42 307.3 27.4 253 7-270 1-281 (286)
215 cd00192 PTKc Catalytic domain 100.0 1.7E-38 3.6E-43 306.0 22.8 245 13-273 1-261 (262)
216 cd05039 PTKc_Csk_like Catalyti 100.0 1.9E-38 4.1E-43 306.4 23.2 247 6-275 5-255 (256)
217 cd06644 STKc_STK10_LOK Catalyt 100.0 2.3E-38 4.9E-43 312.4 24.2 250 5-270 10-267 (292)
218 cd06638 STKc_myosinIIIA Cataly 100.0 3.6E-38 7.8E-43 309.4 25.3 253 4-271 15-282 (286)
219 cd07845 STKc_CDK10 Catalytic d 100.0 4.5E-38 9.8E-43 312.9 26.4 256 5-270 5-288 (309)
220 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.2E-38 4.8E-43 310.8 23.6 261 6-276 3-283 (284)
221 cd05060 PTKc_Syk_like Catalyti 100.0 2.5E-38 5.4E-43 305.9 23.6 247 13-276 1-255 (257)
222 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.9E-38 8.4E-43 305.9 25.0 251 8-271 1-263 (267)
223 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 8.6E-39 1.9E-43 314.1 20.6 259 7-276 4-283 (284)
224 KOG0599 Phosphorylase kinase g 100.0 6.8E-40 1.5E-44 303.9 11.8 250 5-270 15-281 (411)
225 cd06612 STKc_MST1_2 Catalytic 100.0 1.9E-38 4.1E-43 305.7 22.5 249 7-271 3-252 (256)
226 cd05034 PTKc_Src_like Catalyti 100.0 3.2E-38 6.9E-43 305.4 23.9 254 4-275 3-260 (261)
227 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.2E-38 4.8E-43 311.1 23.1 248 7-271 1-261 (286)
228 cd07832 STKc_CCRK Catalytic do 100.0 7.3E-38 1.6E-42 306.8 26.7 254 8-271 1-281 (286)
229 cd07844 STKc_PCTAIRE_like Cata 100.0 8.6E-38 1.9E-42 307.7 26.6 253 6-271 4-287 (291)
230 cd05073 PTKc_Hck Catalytic dom 100.0 4.4E-38 9.6E-43 304.9 24.1 253 4-275 3-259 (260)
231 cd05092 PTKc_TrkA Catalytic do 100.0 2.5E-38 5.4E-43 310.3 22.6 253 6-274 4-279 (280)
232 cd05047 PTKc_Tie Catalytic dom 100.0 2.5E-38 5.3E-43 308.6 22.3 247 13-277 1-269 (270)
233 cd06654 STKc_PAK1 Catalytic do 100.0 7E-38 1.5E-42 310.0 25.9 248 6-271 19-269 (296)
234 cd05056 PTKc_FAK Catalytic dom 100.0 5.2E-38 1.1E-42 305.9 24.5 256 6-279 5-268 (270)
235 cd06616 PKc_MKK4 Catalytic dom 100.0 1.8E-38 3.9E-43 312.1 21.4 252 7-271 4-266 (288)
236 cd07841 STKc_CDK7 Catalytic do 100.0 9.2E-38 2E-42 308.6 26.0 253 8-271 1-281 (298)
237 cd07850 STKc_JNK Catalytic dom 100.0 4.7E-38 1E-42 319.1 24.5 250 4-270 13-309 (353)
238 cd05110 PTKc_HER4 Catalytic do 100.0 4.9E-38 1.1E-42 312.1 24.1 259 4-279 4-271 (303)
239 cd05050 PTKc_Musk Catalytic do 100.0 3.8E-38 8.3E-43 310.0 23.0 253 6-274 4-287 (288)
240 cd07866 STKc_BUR1 Catalytic do 100.0 7.2E-38 1.6E-42 310.5 25.0 263 5-270 6-306 (311)
241 cd06643 STKc_SLK Catalytic dom 100.0 4.1E-38 8.8E-43 308.8 23.0 247 8-270 6-260 (282)
242 cd06609 STKc_MST3_like Catalyt 100.0 4.1E-38 9E-43 307.3 22.9 245 7-271 1-250 (274)
243 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.8E-37 3.8E-42 305.7 27.6 252 6-270 4-286 (291)
244 cd05609 STKc_MAST Catalytic do 100.0 7.9E-38 1.7E-42 310.7 25.2 270 7-293 1-284 (305)
245 cd06611 STKc_SLK_like Catalyti 100.0 2.4E-38 5.1E-43 310.0 20.9 249 6-270 4-260 (280)
246 cd06615 PKc_MEK Catalytic doma 100.0 1.4E-37 3E-42 309.6 26.5 250 7-270 1-285 (308)
247 cd06655 STKc_PAK2 Catalytic do 100.0 1.6E-37 3.4E-42 307.6 26.7 247 6-270 18-267 (296)
248 cd05580 STKc_PKA Catalytic dom 100.0 1.8E-37 4E-42 305.7 27.1 260 7-294 1-266 (290)
249 cd08221 STKc_Nek9 Catalytic do 100.0 2.3E-37 4.9E-42 298.6 27.1 247 8-272 1-253 (256)
250 cd05040 PTKc_Ack_like Catalyti 100.0 5.8E-38 1.3E-42 302.9 22.8 247 13-274 1-256 (257)
251 KOG0194 Protein tyrosine kinas 100.0 6.2E-39 1.3E-43 327.8 16.8 257 6-280 156-424 (474)
252 cd08227 PK_STRAD_alpha Pseudok 100.0 5.6E-38 1.2E-42 315.1 23.4 254 11-271 2-306 (327)
253 cd06630 STKc_MEKK1 Catalytic d 100.0 7.3E-38 1.6E-42 303.9 23.5 254 8-271 1-263 (268)
254 cd08220 STKc_Nek8 Catalytic do 100.0 1.2E-37 2.5E-42 300.2 24.7 246 8-271 1-252 (256)
255 cd05574 STKc_phototropin_like 100.0 1.8E-37 3.9E-42 309.4 26.6 249 7-265 1-278 (316)
256 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.5E-38 9.7E-43 307.7 21.7 260 6-276 3-283 (284)
257 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.5E-38 9.7E-43 309.0 21.6 253 6-272 4-266 (284)
258 cd06608 STKc_myosinIII_like Ca 100.0 1.1E-37 2.3E-42 303.1 24.0 253 4-271 3-271 (275)
259 cd08217 STKc_Nek2 Catalytic do 100.0 1.2E-37 2.7E-42 300.8 24.1 247 8-271 1-261 (265)
260 cd07842 STKc_CDK8_like Catalyt 100.0 2.9E-37 6.3E-42 307.1 27.4 259 8-271 1-312 (316)
261 KOG1095 Protein tyrosine kinas 100.0 1.8E-38 4E-43 345.2 20.2 257 7-279 692-964 (1025)
262 PLN00009 cyclin-dependent kina 100.0 3.7E-37 8.1E-42 303.8 27.8 255 7-271 2-283 (294)
263 cd07833 STKc_CDKL Catalytic do 100.0 2.4E-37 5.3E-42 303.4 26.2 255 7-271 1-284 (288)
264 cd06651 STKc_MEKK3 Catalytic d 100.0 9.1E-38 2E-42 303.7 22.8 249 7-270 2-259 (266)
265 KOG0983 Mitogen-activated prot 100.0 4.4E-39 9.6E-44 298.6 12.8 249 7-270 92-347 (391)
266 cd07865 STKc_CDK9 Catalytic do 100.0 2E-37 4.4E-42 307.2 25.7 259 6-270 11-305 (310)
267 cd06652 STKc_MEKK2 Catalytic d 100.0 1.7E-37 3.7E-42 301.4 24.5 250 7-271 2-260 (265)
268 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.7E-37 3.8E-42 300.6 24.5 254 7-271 1-263 (267)
269 cd06639 STKc_myosinIIIB Cataly 100.0 3E-37 6.4E-42 304.1 26.5 252 5-271 20-286 (291)
270 cd06640 STKc_MST4 Catalytic do 100.0 9.2E-38 2E-42 305.7 22.7 246 6-271 3-252 (277)
271 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.3E-37 2.9E-42 313.8 24.4 256 5-271 3-290 (337)
272 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-37 2.4E-42 313.9 23.7 259 5-270 3-292 (334)
273 cd07860 STKc_CDK2_3 Catalytic 100.0 2.5E-37 5.5E-42 303.1 25.7 253 8-271 1-280 (284)
274 cd07836 STKc_Pho85 Catalytic d 100.0 4.3E-37 9.4E-42 301.2 27.3 253 8-271 1-280 (284)
275 KOG0986 G protein-coupled rece 100.0 4.7E-39 1E-43 316.1 13.0 274 2-301 180-465 (591)
276 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.2E-37 2.5E-42 300.7 22.3 239 13-273 1-258 (259)
277 cd06631 STKc_YSK4 Catalytic do 100.0 2.2E-37 4.7E-42 300.5 24.3 252 8-271 1-261 (265)
278 PHA03210 serine/threonine kina 100.0 8.4E-38 1.8E-42 331.4 23.3 256 5-270 146-452 (501)
279 cd06656 STKc_PAK3 Catalytic do 100.0 1.8E-37 3.9E-42 307.3 24.2 248 6-271 18-268 (297)
280 KOG4257 Focal adhesion tyrosin 100.0 4.6E-38 1E-42 318.4 20.1 254 10-281 392-654 (974)
281 KOG0612 Rho-associated, coiled 100.0 1.8E-39 3.9E-44 347.5 10.4 264 6-295 74-351 (1317)
282 cd05085 PTKc_Fer Catalytic dom 100.0 2.3E-37 5E-42 297.5 24.0 244 13-274 1-249 (250)
283 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.5E-37 5.4E-42 303.3 24.7 253 7-271 1-282 (286)
284 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.3E-37 4.9E-42 312.8 25.1 258 5-270 3-298 (342)
285 cd05112 PTKc_Itk Catalytic dom 100.0 3.4E-37 7.4E-42 297.4 25.2 249 7-273 4-255 (256)
286 cd06605 PKc_MAPKK Catalytic do 100.0 9.1E-38 2E-42 302.7 21.0 247 7-270 1-255 (265)
287 cd07843 STKc_CDC2L1 Catalytic 100.0 2E-37 4.3E-42 305.6 23.8 256 5-271 3-289 (293)
288 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.6E-37 1.4E-41 301.3 27.4 253 7-271 1-265 (287)
289 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.4E-37 5.2E-42 301.3 23.9 250 13-274 1-268 (269)
290 cd07852 STKc_MAPK15 Catalytic 100.0 1.5E-37 3.3E-42 313.2 23.2 264 1-271 1-294 (337)
291 cd05042 PTKc_Aatyk Catalytic d 100.0 3E-37 6.4E-42 300.4 24.4 249 13-274 1-268 (269)
292 cd05633 STKc_GRK3 Catalytic do 100.0 3.8E-37 8.2E-42 302.2 25.2 234 14-265 1-243 (279)
293 cd06618 PKc_MKK7 Catalytic dom 100.0 1.8E-37 4E-42 306.6 23.0 252 5-271 13-272 (296)
294 cd05041 PTKc_Fes_like Catalyti 100.0 3.4E-37 7.3E-42 296.6 24.2 245 13-274 1-250 (251)
295 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.9E-37 1.1E-41 308.7 26.4 252 4-270 7-286 (328)
296 smart00219 TyrKc Tyrosine kina 100.0 3.1E-37 6.7E-42 297.0 23.9 248 9-273 1-258 (258)
297 cd06623 PKc_MAPKK_plant_like C 100.0 5.6E-37 1.2E-41 296.5 25.7 249 7-271 1-255 (264)
298 cd08218 STKc_Nek1 Catalytic do 100.0 3E-37 6.4E-42 297.8 23.0 246 8-271 1-252 (256)
299 cd07857 STKc_MPK1 Catalytic do 100.0 8E-37 1.7E-41 307.4 27.1 256 8-270 1-290 (332)
300 cd06917 STKc_NAK1_like Catalyt 100.0 3.1E-37 6.7E-42 301.4 23.4 245 8-271 2-254 (277)
301 cd06632 STKc_MEKK1_plant Catal 100.0 3.6E-37 7.7E-42 296.9 23.3 245 8-271 1-254 (258)
302 cd06607 STKc_TAO Catalytic dom 100.0 3.8E-37 8.3E-42 306.1 24.1 246 5-271 13-266 (307)
303 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.1E-38 1.1E-42 304.3 17.3 240 13-273 1-257 (258)
304 cd07864 STKc_CDK12 Catalytic d 100.0 3.2E-37 6.9E-42 305.1 23.3 259 4-271 4-298 (302)
305 cd05046 PTK_CCK4 Pseudokinase 100.0 5.4E-37 1.2E-41 299.4 24.4 252 7-274 5-274 (275)
306 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.2E-37 1.3E-41 298.4 24.8 251 8-271 2-268 (272)
307 cd05611 STKc_Rim15_like Cataly 100.0 2.9E-37 6.4E-42 298.7 22.3 248 13-279 2-255 (260)
308 cd05044 PTKc_c-ros Catalytic d 100.0 1.8E-37 3.8E-42 301.6 20.6 249 13-274 1-268 (269)
309 cd07838 STKc_CDK4_6_like Catal 100.0 1E-36 2.2E-41 298.6 26.2 251 9-270 1-282 (287)
310 cd06642 STKc_STK25-YSK1 Cataly 100.0 9.1E-38 2E-42 305.5 18.7 245 7-271 4-252 (277)
311 cd07880 STKc_p38gamma_MAPK12 C 100.0 8.4E-37 1.8E-41 308.9 26.2 251 5-270 13-296 (343)
312 KOG0584 Serine/threonine prote 100.0 2E-38 4.4E-43 323.5 14.3 250 9-280 42-301 (632)
313 PHA03390 pk1 serine/threonine- 100.0 7.6E-37 1.7E-41 298.1 24.9 242 6-270 13-260 (267)
314 PTZ00024 cyclin-dependent prot 100.0 6.2E-37 1.3E-41 308.3 24.9 265 1-270 2-311 (335)
315 cd07835 STKc_CDK1_like Catalyt 100.0 8.8E-37 1.9E-41 299.1 25.2 252 9-271 1-279 (283)
316 cd08225 STKc_Nek5 Catalytic do 100.0 4.6E-37 9.9E-42 296.2 22.8 247 8-271 1-253 (257)
317 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-36 2.3E-41 308.3 26.1 252 4-270 14-298 (345)
318 cd06653 STKc_MEKK3_like_1 Cata 100.0 7.5E-37 1.6E-41 297.0 23.9 249 7-270 2-259 (264)
319 cd06624 STKc_ASK Catalytic dom 100.0 1.1E-36 2.3E-41 296.3 24.7 248 9-271 10-264 (268)
320 cd06658 STKc_PAK5 Catalytic do 100.0 2E-37 4.3E-42 306.3 19.9 247 7-271 22-271 (292)
321 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.5E-37 9.7E-42 298.8 21.9 240 13-273 1-261 (262)
322 cd06641 STKc_MST3 Catalytic do 100.0 8.4E-37 1.8E-41 298.9 23.9 245 7-271 4-252 (277)
323 cd05578 STKc_Yank1 Catalytic d 100.0 3E-37 6.5E-42 298.3 20.5 242 8-267 1-248 (258)
324 cd05583 STKc_MSK_N N-terminal 100.0 7.2E-37 1.6E-41 300.9 23.5 264 8-293 1-277 (288)
325 cd07834 STKc_MAPK Catalytic do 100.0 7.8E-37 1.7E-41 306.7 24.0 252 8-270 1-287 (330)
326 cd07840 STKc_CDK9_like Catalyt 100.0 1.1E-36 2.3E-41 298.2 24.4 254 9-271 1-283 (287)
327 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.3E-37 1.4E-41 299.9 22.4 239 14-273 2-273 (274)
328 cd05606 STKc_beta_ARK Catalyti 100.0 2E-36 4.4E-41 296.7 26.1 239 14-270 1-253 (278)
329 cd07879 STKc_p38delta_MAPK13 C 100.0 1.4E-36 3.1E-41 307.0 25.7 252 4-271 12-296 (342)
330 cd05118 STKc_CMGC Catalytic do 100.0 6.9E-37 1.5E-41 299.2 22.7 249 9-271 1-279 (283)
331 KOG0607 MAP kinase-interacting 100.0 8.2E-38 1.8E-42 295.6 15.4 255 13-269 84-358 (463)
332 cd06659 STKc_PAK6 Catalytic do 100.0 4.2E-37 9.1E-42 304.7 21.2 247 7-271 21-270 (297)
333 cd06635 STKc_TAO1 Catalytic do 100.0 1.9E-36 4.1E-41 302.7 26.0 246 6-272 24-277 (317)
334 cd05577 STKc_GRK Catalytic dom 100.0 2E-36 4.4E-41 296.2 25.2 238 15-268 1-245 (277)
335 cd05122 PKc_STE Catalytic doma 100.0 2E-36 4.3E-41 289.4 24.5 247 8-271 1-250 (253)
336 cd08528 STKc_Nek10 Catalytic d 100.0 1E-36 2.2E-41 296.4 22.9 250 8-274 1-268 (269)
337 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.2E-36 2.5E-41 296.5 23.0 253 9-276 1-272 (273)
338 cd07851 STKc_p38 Catalytic dom 100.0 8.3E-37 1.8E-41 308.8 22.8 248 5-270 13-296 (343)
339 KOG4250 TANK binding protein k 100.0 8.1E-38 1.8E-42 322.7 15.5 272 5-284 11-318 (732)
340 cd08215 STKc_Nek Catalytic dom 100.0 1.5E-36 3.3E-41 291.7 22.7 246 8-271 1-254 (258)
341 cd06633 STKc_TAO3 Catalytic do 100.0 4.3E-36 9.3E-41 299.7 26.7 244 6-270 20-271 (313)
342 cd05613 STKc_MSK1_N N-terminal 100.0 4.7E-36 1E-40 295.4 26.0 243 8-265 1-256 (290)
343 cd06647 STKc_PAK_I Catalytic d 100.0 1.6E-36 3.4E-41 299.9 22.6 247 6-270 18-267 (293)
344 cd06626 STKc_MEKK4 Catalytic d 100.0 5.8E-36 1.3E-40 289.6 26.1 251 8-270 1-259 (264)
345 KOG0604 MAP kinase-activated p 100.0 6.5E-38 1.4E-42 294.2 11.5 260 4-278 58-325 (400)
346 cd05581 STKc_PDK1 Catalytic do 100.0 2.2E-36 4.7E-41 295.0 22.7 248 7-266 1-267 (280)
347 KOG4645 MAPKKK (MAP kinase kin 100.0 5.9E-39 1.3E-43 347.5 4.9 257 6-279 1234-1498(1509)
348 KOG4236 Serine/threonine prote 100.0 4.9E-38 1.1E-42 313.0 11.0 241 13-268 570-815 (888)
349 cd06614 STKc_PAK Catalytic dom 100.0 2.7E-36 5.9E-41 296.5 23.2 250 5-270 17-268 (286)
350 KOG0671 LAMMER dual specificit 100.0 5.1E-38 1.1E-42 303.9 10.6 261 4-277 86-408 (415)
351 cd06606 STKc_MAPKKK Catalytic 100.0 7.8E-36 1.7E-40 286.4 25.7 249 8-271 1-256 (260)
352 KOG0579 Ste20-like serine/thre 100.0 3.8E-38 8.2E-43 319.0 10.0 248 7-270 32-287 (1187)
353 cd07830 STKc_MAK_like Catalyti 100.0 3.9E-36 8.4E-41 294.4 24.0 252 9-271 1-279 (283)
354 cd05572 STKc_cGK_PKG Catalytic 100.0 4E-36 8.7E-41 291.1 23.6 234 15-265 1-240 (262)
355 cd06634 STKc_TAO2 Catalytic do 100.0 3E-36 6.6E-41 300.0 23.1 245 6-271 14-266 (308)
356 cd06648 STKc_PAK_II Catalytic 100.0 6.7E-36 1.5E-40 294.1 24.7 245 8-270 20-267 (285)
357 cd08530 STKc_CNK2-like Catalyt 100.0 3.9E-36 8.5E-41 289.3 22.5 244 8-271 1-252 (256)
358 KOG1151 Tousled-like protein k 100.0 2.3E-38 5E-43 309.9 6.6 263 3-269 459-738 (775)
359 cd06627 STKc_Cdc7_like Catalyt 100.0 8.4E-36 1.8E-40 286.4 24.3 245 8-271 1-250 (254)
360 cd07829 STKc_CDK_like Catalyti 100.0 6.2E-36 1.3E-40 292.3 23.5 252 9-271 1-278 (282)
361 KOG0696 Serine/threonine prote 100.0 1.4E-37 3.1E-42 302.2 11.6 274 6-303 348-627 (683)
362 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.2E-35 2.5E-40 289.6 24.7 248 13-273 1-266 (268)
363 cd08226 PK_STRAD_beta Pseudoki 100.0 1.2E-35 2.6E-40 298.3 24.0 252 13-270 4-306 (328)
364 cd05579 STKc_MAST_like Catalyt 100.0 5.5E-36 1.2E-40 289.2 20.3 252 15-277 1-259 (265)
365 KOG0614 cGMP-dependent protein 100.0 6.5E-38 1.4E-42 311.3 6.7 273 6-302 419-697 (732)
366 KOG0586 Serine/threonine prote 100.0 2E-36 4.3E-41 308.6 17.6 246 4-270 53-304 (596)
367 KOG0666 Cyclin C-dependent kin 100.0 9.8E-37 2.1E-41 287.5 13.7 266 6-278 23-340 (438)
368 cd06657 STKc_PAK4 Catalytic do 100.0 2E-35 4.3E-40 292.1 23.3 244 10-271 23-269 (292)
369 cd05610 STKc_MASTL Catalytic d 100.0 5.4E-35 1.2E-39 319.6 28.6 145 6-155 3-153 (669)
370 cd08222 STKc_Nek11 Catalytic d 100.0 7.8E-36 1.7E-40 288.8 19.4 245 8-271 1-256 (260)
371 KOG1094 Discoidin domain recep 100.0 2.5E-36 5.4E-41 304.3 16.0 261 6-276 537-804 (807)
372 KOG0199 ACK and related non-re 100.0 1.3E-36 2.9E-41 311.3 13.8 249 7-271 110-367 (1039)
373 KOG1006 Mitogen-activated prot 100.0 8.5E-38 1.9E-42 289.1 4.4 252 7-271 64-326 (361)
374 KOG0587 Traf2- and Nck-interac 100.0 3.5E-35 7.5E-40 308.5 21.1 249 4-269 16-279 (953)
375 cd08216 PK_STRAD Pseudokinase 100.0 5.6E-35 1.2E-39 291.0 21.5 253 11-271 6-294 (314)
376 KOG0196 Tyrosine kinase, EPH ( 100.0 5.2E-36 1.1E-40 310.6 13.5 258 7-279 629-894 (996)
377 KOG0603 Ribosomal protein S6 k 100.0 1.8E-35 3.9E-40 303.0 16.4 241 5-270 320-561 (612)
378 cd05123 STKc_AGC Catalytic dom 100.0 2.5E-34 5.5E-39 275.9 22.2 234 15-268 1-240 (250)
379 KOG1035 eIF-2alpha kinase GCN2 100.0 1.6E-35 3.4E-40 319.7 15.1 257 5-270 477-869 (1351)
380 KOG0662 Cyclin-dependent kinas 100.0 5.3E-35 1.1E-39 256.5 14.7 253 7-270 2-281 (292)
381 KOG2052 Activin A type IB rece 100.0 1.5E-34 3.2E-39 284.3 19.0 265 3-278 207-505 (513)
382 PLN03225 Serine/threonine-prot 100.0 1.7E-34 3.8E-39 308.8 21.3 252 6-271 131-449 (566)
383 KOG0695 Serine/threonine prote 100.0 2.1E-35 4.5E-40 280.7 12.2 274 6-299 249-533 (593)
384 KOG1290 Serine/threonine prote 100.0 8.7E-34 1.9E-38 281.3 22.7 132 5-136 76-221 (590)
385 KOG0669 Cyclin T-dependent kin 100.0 2.8E-36 6E-41 277.1 3.0 259 6-270 16-313 (376)
386 KOG0608 Warts/lats-like serine 100.0 2.1E-34 4.4E-39 292.3 16.0 275 8-299 630-945 (1034)
387 KOG0670 U4/U6-associated splic 100.0 4.8E-35 1E-39 291.6 11.0 206 3-219 428-641 (752)
388 cd05576 STKc_RPK118_like Catal 100.0 8.2E-34 1.8E-38 271.8 18.5 220 18-267 4-224 (237)
389 KOG0200 Fibroblast/platelet-de 100.0 2.9E-33 6.3E-38 302.1 23.7 257 8-279 297-582 (609)
390 KOG3653 Transforming growth fa 100.0 1.9E-33 4.1E-38 278.4 16.0 257 7-277 210-504 (534)
391 PLN00113 leucine-rich repeat r 100.0 9.5E-33 2.1E-37 315.1 23.7 249 8-278 691-953 (968)
392 smart00220 S_TKc Serine/Threon 100.0 7.8E-32 1.7E-36 255.6 22.0 236 19-271 1-240 (244)
393 KOG1025 Epidermal growth facto 100.0 6.2E-33 1.3E-37 288.7 14.4 255 9-280 698-961 (1177)
394 KOG1027 Serine/threonine prote 100.0 2.2E-33 4.8E-38 293.7 9.8 245 12-270 514-765 (903)
395 KOG0984 Mitogen-activated prot 100.0 1.4E-32 3E-37 246.3 11.6 211 8-231 47-268 (282)
396 PLN03224 probable serine/threo 100.0 6.7E-31 1.5E-35 275.3 24.1 253 6-270 144-498 (507)
397 KOG0664 Nemo-like MAPK-related 100.0 1.2E-33 2.6E-38 262.3 1.7 253 4-269 50-340 (449)
398 KOG1345 Serine/threonine kinas 100.0 5.2E-32 1.1E-36 251.4 11.3 266 4-283 21-295 (378)
399 KOG0668 Casein kinase II, alph 100.0 4.4E-32 9.5E-37 246.4 10.5 250 6-270 37-320 (338)
400 KOG1152 Signal transduction se 100.0 1.5E-31 3.1E-36 269.8 11.4 195 8-215 562-771 (772)
401 KOG1024 Receptor-like protein 100.0 6E-31 1.3E-35 254.9 14.7 260 6-280 283-559 (563)
402 cd00180 PKc Catalytic domain o 100.0 3.5E-29 7.7E-34 231.1 22.6 208 15-272 1-214 (215)
403 KOG1167 Serine/threonine prote 100.0 5.4E-31 1.2E-35 258.3 10.4 262 3-270 32-379 (418)
404 KOG0665 Jun-N-terminal kinase 100.0 7.4E-31 1.6E-35 249.0 10.4 255 5-277 15-312 (369)
405 KOG0576 Mitogen-activated prot 100.0 6E-31 1.3E-35 269.2 4.7 264 6-284 14-294 (829)
406 smart00221 STYKc Protein kinas 100.0 1.2E-27 2.6E-32 224.9 20.5 197 9-215 1-202 (225)
407 smart00750 KIND kinase non-cat 100.0 5.5E-28 1.2E-32 220.3 16.5 167 87-278 1-171 (176)
408 PLN00181 protein SPA1-RELATED; 100.0 1.5E-28 3.2E-33 274.6 11.6 188 75-271 52-264 (793)
409 PRK09188 serine/threonine prot 99.9 8.3E-26 1.8E-30 227.8 15.3 180 3-197 14-210 (365)
410 COG0515 SPS1 Serine/threonine 99.9 5E-24 1.1E-28 208.4 26.1 257 9-272 2-275 (384)
411 KOG0590 Checkpoint kinase and 99.9 6.8E-25 1.5E-29 234.8 7.4 252 10-269 321-582 (601)
412 KOG1166 Mitotic checkpoint ser 99.9 1.8E-22 3.9E-27 220.7 17.8 255 5-280 696-957 (974)
413 PF14531 Kinase-like: Kinase-l 99.9 1.1E-22 2.3E-27 197.3 14.1 231 8-263 13-288 (288)
414 cd05147 RIO1_euk RIO kinase fa 99.9 1.6E-22 3.5E-27 187.3 12.9 137 12-157 2-168 (190)
415 PRK10359 lipopolysaccharide co 99.9 2.7E-22 5.9E-27 189.0 11.5 171 2-207 26-216 (232)
416 PRK12274 serine/threonine prot 99.9 1.7E-21 3.7E-26 180.2 14.2 192 9-217 4-211 (218)
417 KOG0606 Microtubule-associated 99.9 2.3E-22 5E-27 216.0 9.4 238 6-294 82-327 (1205)
418 cd05145 RIO1_like RIO kinase f 99.9 3.4E-21 7.4E-26 178.5 14.9 138 11-158 1-169 (190)
419 KOG0603 Ribosomal protein S6 k 99.9 2E-22 4.3E-27 207.4 3.8 251 14-300 1-261 (612)
420 KOG4158 BRPK/PTEN-induced prot 99.8 2.3E-20 4.9E-25 182.2 12.9 195 75-280 315-518 (598)
421 KOG1240 Protein kinase contain 99.8 2.4E-21 5.1E-26 208.5 6.2 249 8-273 24-292 (1431)
422 KOG0195 Integrin-linked kinase 99.8 9.5E-21 2.1E-25 176.6 7.0 243 9-276 192-446 (448)
423 smart00090 RIO RIO-like kinase 99.8 1.5E-19 3.2E-24 173.2 12.0 142 8-157 29-199 (237)
424 PRK10345 hypothetical protein; 99.8 1.2E-18 2.5E-23 163.5 15.5 136 12-154 7-157 (210)
425 PRK14879 serine/threonine prot 99.8 2.5E-18 5.4E-23 161.5 15.3 132 12-155 1-143 (211)
426 KOG1033 eIF-2alpha kinase PEK/ 99.8 5.8E-20 1.3E-24 186.0 3.1 242 8-266 245-506 (516)
427 KOG1023 Natriuretic peptide re 99.8 2.2E-18 4.9E-23 177.4 12.1 212 58-279 3-227 (484)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 9.2E-18 2E-22 156.2 14.5 128 14-156 1-139 (199)
429 cd05144 RIO2_C RIO kinase fami 99.7 1.3E-17 2.8E-22 155.5 13.0 136 8-158 16-177 (198)
430 PRK09605 bifunctional UGMP fam 99.7 5.3E-17 1.1E-21 173.8 15.5 133 7-155 333-476 (535)
431 cd05119 RIO RIO kinase family, 99.7 2.7E-16 5.8E-21 144.8 12.6 135 12-158 2-166 (187)
432 cd05120 APH_ChoK_like Aminogly 99.6 2.2E-15 4.7E-20 132.2 12.8 132 11-155 2-138 (155)
433 PRK01723 3-deoxy-D-manno-octul 99.6 4.9E-15 1.1E-19 142.2 15.8 132 13-155 37-191 (239)
434 KOG0590 Checkpoint kinase and 99.6 2.5E-17 5.4E-22 176.7 -3.6 253 6-269 19-283 (601)
435 KOG0601 Cyclin-dependent kinas 99.6 3.2E-15 6.9E-20 154.3 6.8 254 5-271 112-378 (524)
436 TIGR01982 UbiB 2-polyprenylphe 99.5 5.3E-13 1.1E-17 139.0 19.9 137 13-157 123-308 (437)
437 cd05151 ChoK Choline Kinase (C 99.4 5.9E-13 1.3E-17 120.2 11.6 126 12-154 3-135 (170)
438 PRK04750 ubiB putative ubiquin 99.4 7.9E-12 1.7E-16 132.1 20.9 143 8-158 121-316 (537)
439 cd05146 RIO3_euk RIO kinase fa 99.4 1.2E-12 2.5E-17 121.0 12.5 137 12-158 2-176 (197)
440 KOG3087 Serine/threonine prote 99.3 1.9E-11 4.1E-16 109.3 11.7 142 11-155 11-165 (229)
441 COG3642 Mn2+-dependent serine/ 99.3 2.5E-11 5.5E-16 109.0 10.7 128 13-155 2-140 (204)
442 KOG0606 Microtubule-associated 99.3 2E-12 4.4E-17 140.3 2.7 274 6-296 803-1106(1205)
443 KOG0601 Cyclin-dependent kinas 99.2 8E-12 1.7E-16 129.4 5.2 240 6-270 264-512 (524)
444 KOG1243 Protein kinase [Genera 99.2 4.7E-10 1E-14 117.6 14.3 182 9-210 15-200 (690)
445 cd05154 ACAD10_11_like Acyl-Co 99.1 3.7E-10 7.9E-15 106.3 11.5 138 13-154 4-205 (223)
446 PRK15123 lipopolysaccharide co 99.1 7.7E-09 1.7E-13 100.7 18.1 132 21-154 36-193 (268)
447 COG4248 Uncharacterized protei 99.1 3.9E-09 8.4E-14 105.2 15.1 255 9-278 13-302 (637)
448 KOG1266 Protein kinase [Signal 99.0 1.5E-09 3.2E-14 104.9 8.3 173 77-269 146-328 (458)
449 PF01163 RIO1: RIO1 family; I 99.0 2.6E-09 5.5E-14 98.4 9.4 125 22-157 1-157 (188)
450 KOG2137 Protein kinase [Signal 98.9 1.2E-09 2.6E-14 115.0 4.7 154 110-270 106-263 (700)
451 PF06293 Kdo: Lipopolysacchari 98.8 1.3E-07 2.9E-12 88.6 13.4 110 46-156 55-171 (206)
452 KOG3741 Poly(A) ribonuclease s 98.7 9.4E-07 2E-11 90.6 19.0 209 20-270 289-519 (655)
453 PRK09902 hypothetical protein; 98.7 4.9E-07 1.1E-11 84.2 15.5 137 16-155 27-179 (216)
454 PF06176 WaaY: Lipopolysacchar 98.7 2.1E-07 4.5E-12 86.9 11.4 136 4-154 28-182 (229)
455 COG2112 Predicted Ser/Thr prot 98.6 3.4E-07 7.5E-12 82.0 11.1 127 11-155 26-155 (201)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 1E-06 2.2E-11 83.9 14.0 71 13-87 7-78 (226)
457 COG0478 RIO-like serine/threon 98.5 6.6E-07 1.4E-11 85.4 10.9 133 9-155 93-251 (304)
458 COG1718 RIO1 Serine/threonine 98.5 1E-06 2.2E-11 83.4 11.8 136 13-158 54-218 (268)
459 COG0661 AarF Predicted unusual 98.5 6.3E-07 1.4E-11 94.5 10.8 140 13-158 131-317 (517)
460 PF01636 APH: Phosphotransfera 98.4 3.1E-06 6.7E-11 79.9 12.8 139 12-154 2-196 (239)
461 cd05150 APH Aminoglycoside 3'- 98.4 6.2E-06 1.3E-10 79.2 13.3 75 14-91 5-81 (244)
462 PF10707 YrbL-PhoP_reg: PhoP r 98.2 5.7E-05 1.2E-09 70.2 15.2 132 12-152 6-169 (199)
463 KOG0576 Mitogen-activated prot 98.2 1.8E-07 3.9E-12 97.9 -2.0 257 9-292 244-502 (829)
464 PF13095 FTA2: Kinetochore Sim 98.1 4.5E-05 9.7E-10 70.6 12.7 124 7-153 37-206 (207)
465 KOG1235 Predicted unusual prot 98.1 1.6E-05 3.5E-10 83.9 11.0 142 13-159 167-358 (538)
466 cd05155 APH_ChoK_like_1 Unchar 98.0 2.8E-05 6E-10 74.4 10.2 73 12-89 2-81 (235)
467 PLN02876 acyl-CoA dehydrogenas 97.9 0.00017 3.7E-09 81.5 14.4 77 11-87 42-128 (822)
468 PRK09550 mtnK methylthioribose 97.9 0.0038 8.3E-08 64.2 22.7 73 12-86 31-114 (401)
469 cd05157 ETNK_euk Ethanolamine 97.8 0.00052 1.1E-08 65.3 14.2 73 12-88 3-78 (235)
470 TIGR01767 MTRK 5-methylthiorib 97.8 0.0027 5.8E-08 64.2 19.5 70 14-85 2-82 (370)
471 KOG2270 Serine/threonine prote 97.8 0.00018 3.8E-09 71.8 10.3 140 11-158 148-316 (520)
472 PRK10593 hypothetical protein; 97.7 0.00072 1.6E-08 67.1 13.8 77 8-86 15-96 (297)
473 TIGR02721 ycfN_thiK thiamine k 97.6 0.00051 1.1E-08 66.5 10.6 131 14-154 3-174 (256)
474 PRK05231 homoserine kinase; Pr 97.5 0.0022 4.8E-08 64.1 14.9 73 12-87 27-106 (319)
475 KOG1035 eIF-2alpha kinase GCN2 97.5 0.00088 1.9E-08 75.3 12.5 202 49-280 229-439 (1351)
476 TIGR00938 thrB_alt homoserine 97.5 0.0012 2.6E-08 65.8 12.6 140 10-154 25-216 (307)
477 cd05156 ChoK_euk Choline Kinas 97.5 0.0011 2.4E-08 65.7 11.5 70 12-85 3-79 (302)
478 PF12260 PIP49_C: Protein-kina 97.3 0.00071 1.5E-08 62.4 7.9 100 50-156 7-112 (188)
479 KOG2268 Serine/threonine prote 97.3 0.00012 2.5E-09 71.9 2.8 132 9-155 94-251 (465)
480 cd05153 HomoserineK_II Homoser 97.3 0.0023 5.1E-08 63.1 12.0 137 12-154 19-204 (296)
481 PRK12396 5-methylribose kinase 97.3 0.023 5E-07 58.2 18.4 72 12-85 34-115 (409)
482 KOG1093 Predicted protein kina 97.2 0.0011 2.4E-08 68.7 8.7 163 45-269 25-191 (725)
483 cd05152 MPH2' Macrolide 2'-Pho 97.2 0.0026 5.6E-08 62.4 10.6 46 16-62 20-65 (276)
484 PLN02236 choline kinase 96.9 0.015 3.2E-07 59.0 13.6 137 12-154 41-230 (344)
485 KOG1826 Ras GTPase activating 96.8 0.00026 5.7E-09 81.1 -0.5 130 74-213 1302-1440(2724)
486 PLN02421 phosphotransferase, a 96.7 0.018 4E-07 58.0 12.2 70 12-85 19-92 (330)
487 PLN02756 S-methyl-5-thioribose 96.4 0.058 1.2E-06 55.6 13.5 73 11-87 36-119 (418)
488 COG5072 ALK1 Serine/threonine 96.3 0.013 2.8E-07 58.7 7.8 74 73-155 296-370 (488)
489 PF03881 Fructosamin_kin: Fruc 96.1 0.092 2E-06 51.8 12.7 74 9-85 19-94 (288)
490 COG3173 Predicted aminoglycosi 96.0 0.047 1E-06 54.4 9.8 31 123-156 199-229 (321)
491 PRK11768 serine/threonine prot 95.8 0.18 4E-06 50.6 13.5 66 19-85 37-109 (325)
492 PF01633 Choline_kinase: Choli 95.6 0.029 6.2E-07 52.5 6.7 30 123-154 144-173 (211)
493 PTZ00384 choline kinase; Provi 95.5 0.28 6.1E-06 50.4 14.0 71 11-85 54-131 (383)
494 KOG1236 Predicted unusual prot 95.5 0.076 1.6E-06 54.2 9.3 60 77-138 319-380 (565)
495 COG2334 Putative homoserine ki 95.4 0.1 2.2E-06 52.5 9.9 131 19-154 37-227 (331)
496 PRK06148 hypothetical protein; 95.1 0.39 8.4E-06 55.8 14.7 47 13-61 31-77 (1013)
497 TIGR02904 spore_ysxE spore coa 94.8 0.47 1E-05 47.2 12.7 29 123-154 197-225 (309)
498 PTZ00296 choline kinase; Provi 94.0 0.73 1.6E-05 48.4 12.4 71 11-85 109-188 (442)
499 PRK06149 hypothetical protein; 93.6 1.2 2.5E-05 51.7 14.3 47 13-62 37-83 (972)
500 TIGR02906 spore_CotS spore coa 93.6 0.14 3E-06 50.8 6.0 29 122-154 187-215 (313)
No 1
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-59 Score=423.72 Aligned_cols=295 Identities=71% Similarity=1.242 Sum_probs=288.3
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.+++++|+++++||+|+||.+|+|....+|+.||||++..+..++++..|.++++.|++..+|+.+.+|+.+..+.++||
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|++|++|+++++.|.+.|+.++++.++.||+..|+|+|.+++|||||||+|+|++.+.....+.|+|||+|+.+.+..+.
T Consensus 91 dLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 91 DLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred eccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.|+||++...++||.+|++...+.+.++++++|+.|+|++|+++..|.+||++..+.++.+++++|.+++...+++.+|+
T Consensus 171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~ 250 (341)
T KOG1163|consen 171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCK 250 (341)
T ss_pred ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccccc
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQ 297 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~ 297 (474)
++|.||.-++.+|..+.+++.|++..|.++|+-+|...++++|+.|||+.++.+.
T Consensus 251 G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lkqk~ 305 (341)
T KOG1163|consen 251 GFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQKS 305 (341)
T ss_pred CCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999987543
No 2
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-57 Score=431.88 Aligned_cols=291 Identities=61% Similarity=1.044 Sum_probs=283.6
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|+-.|+++++||+|+||++++|++..+++.||||.+..+...+++..|.+.++.|.+..+|+.+++|+.++.+.+||||
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeC--CCCCeEEEEecCCccccccCCC
Q 011945 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG--RRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~--~~~~~vkL~DFGla~~~~~~~~ 161 (474)
++|+||+|+++.|+++|+.+++++|+.||+.-++|+|++.+|+|||||+|+||+.. .+...|.|+|||+|+.+.++.+
T Consensus 105 LLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 105 LLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred hhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 99999999999999999999999999999999999999999999999999999852 3456799999999999999999
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
++|+||++.+.+.||.+||+...++|.++++++|+.|||-|++++|.|.+||+++++.+.+++|++|.+++..++++.+|
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc 264 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLC 264 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
.++|.+|..++.+...+++++-|+|+.+..+|.++|.+.|..+|+.|||..+.
T Consensus 265 ~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln 317 (449)
T KOG1165|consen 265 EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN 317 (449)
T ss_pred hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence 99999999999999999999999999999999999999999999999999875
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-49 Score=382.35 Aligned_cols=254 Identities=22% Similarity=0.341 Sum_probs=214.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.+.+.++.||+|..|+||+|.++.+++.+|+|++.... ...++.+|+++++.++++.+|..+..|...+....|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 36778899999999999999999999999999884432 356799999999999755555555555544446899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|| +|+|++++... +++++..+-.|+.+|++||.|||+ ++||||||||+|||| +..|.|||||||.++.+.+..
T Consensus 159 YMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS~- 233 (364)
T KOG0581|consen 159 YMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNSI- 233 (364)
T ss_pred hcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhhh-
Confidence 99 99999999854 679999999999999999999996 999999999999999 589999999999999887753
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CcCcHHHHHHHHhhccccchHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL--KAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~--~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.++++||..|||||.+.+..|+.++||||||++|+||++|++||... ......+.+..|..... +.
T Consensus 234 --------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp----P~ 301 (364)
T KOG0581|consen 234 --------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP----PR 301 (364)
T ss_pred --------cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC----CC
Confidence 36789999999999999999999999999999999999999999763 23456666666665443 33
Q ss_pred HhcC-CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 240 LCRG-YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 240 l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
++.+ ++++|++||..||.+||.+||++.+| +.+.|.+.
T Consensus 302 lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qL---l~Hpfi~~ 340 (364)
T KOG0581|consen 302 LPEGEFSPEFRSFVSCCLRKDPSERPSAKQL---LQHPFIKK 340 (364)
T ss_pred CCcccCCHHHHHHHHHHhcCCcccCCCHHHH---hcCHHHhh
Confidence 4454 89999999999999999999997665 66777654
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-49 Score=385.20 Aligned_cols=260 Identities=24% Similarity=0.339 Sum_probs=213.2
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---------CchHHHHHHHHHHHhcCCCCCceeEEEeEe
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---------KHPQLQYEAKLYKILQGGTGIPNLRWFGVE 74 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---------~~~~l~~E~~il~~l~~~~~i~~l~~~~~~ 74 (474)
.+.+.|.+.+.||+|+||.|-+|..+.+|+.||||+++... ....+.+|++||++|+| |+|+.+..+.+.
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H-P~IV~~~d~f~~ 247 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH-PNIVRIKDFFEV 247 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC-CCEEEEeeeeec
Confidence 35678999999999999999999999999999999986532 12236799999999995 555566666677
Q ss_pred CCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 75 GDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 75 ~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
.++.||||||+ ||.|.+.+- .++.+.+.....++.||+.||.|||++||+||||||+|||+..+..+..+||+|||+|
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv-~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVV-ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred CCceEEEEEEecCccHHHHHH-hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 77889999999 999999886 3567899999999999999999999999999999999999987767789999999999
Q ss_pred cccccCCCccccccccCCCCccCccccccccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 230 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~---~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (474)
+...... ..+++|||+.|.|||++.+.. +..++|||||||+||-+|+|.+||.+.... ....+.|..
T Consensus 327 K~~g~~s--------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--~sl~eQI~~ 396 (475)
T KOG0615|consen 327 KVSGEGS--------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--PSLKEQILK 396 (475)
T ss_pred hccccce--------ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC--ccHHHHHhc
Confidence 9776432 246789999999999998765 345889999999999999999999875432 223445555
Q ss_pred ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 231 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 231 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
.+... .+..+..++++..+||.+||..||++||+++++ |++.+.+
T Consensus 397 G~y~f-~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~ea---L~hpW~~ 441 (475)
T KOG0615|consen 397 GRYAF-GPLQWDRISEEALDLINWMLVVDPENRPSADEA---LNHPWFK 441 (475)
T ss_pred Ccccc-cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHH---hcChhhh
Confidence 55432 234457789999999999999999999997765 5565543
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-48 Score=387.55 Aligned_cols=270 Identities=24% Similarity=0.364 Sum_probs=228.9
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
-.++|++++.||.|+|++||+|+++.+++.||||++.+. ...+-+..|-.+|.+|.+|++|..++..+.++...|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 356899999999999999999999999999999986543 344558889999999999999999999999999999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+|+||+ +|.|.++|+.. +.|++..+..++.||+.||+|||++|||||||||+|||| +.++++||+|||.|+.+..
T Consensus 151 FvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCCh
Confidence 999999 99999999854 689999999999999999999999999999999999999 6899999999999998876
Q ss_pred CCCcccc----cccc--CCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc
Q 011945 159 TATHQHI----PYRE--NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 232 (474)
Q Consensus 159 ~~~~~~~----~~~~--~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (474)
....+.- .+.. ...++||..|.+||++.....+..+|||+||||||+|+.|.+||.+.+.... +++|+...
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli---FqkI~~l~ 303 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI---FQKIQALD 303 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH---HHHHHHhc
Confidence 5433111 1111 2569999999999999999999999999999999999999999988655433 44444333
Q ss_pred ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccccc
Q 011945 233 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 296 (474)
Q Consensus 233 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 296 (474)
. .+..++|+.+.+||+++|..||.+|++.++|.+ +.|...+||.-+..+
T Consensus 304 y-----~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~----------HpFF~~Vdw~nlw~~ 352 (604)
T KOG0592|consen 304 Y-----EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA----------HPFFEGVDWENLWQQ 352 (604)
T ss_pred c-----cCCCCCCHHHHHHHHHHHccCccccccHHHHhh----------CcccccCChhhhhhc
Confidence 2 345789999999999999999999999876643 356677888875443
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-48 Score=391.27 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=222.4
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
.+|+..+.||+|||+.||.+++..+|+.||+|++... ...+.+.+|++|.+.|+ |++|+.++.|+++.++.|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 5799999999999999999999999999999987652 34556999999999999 55667777788999999999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
+|+| .++|..+++ ..+.+++.+++.++.||+.||.|||+++|||||||..|||| +++.+|||+|||||..+..+.
T Consensus 97 LELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 97 LELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCcc
Confidence 9999 889999988 56789999999999999999999999999999999999999 588899999999999887553
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. ...+.|||+.|+|||++.....+..+||||+|||||-||.|++||+. .+.++.|.+|.......
T Consensus 173 E-------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet---k~vkety~~Ik~~~Y~~----- 237 (592)
T KOG0575|consen 173 E-------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET---KTVKETYNKIKLNEYSM----- 237 (592)
T ss_pred c-------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc---chHHHHHHHHHhcCccc-----
Confidence 2 23678999999999999999999999999999999999999999986 45567777776655432
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFD 285 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~ 285 (474)
+..++.+.++||..+|..||.+||++++| |++-|-..|+...
T Consensus 238 P~~ls~~A~dLI~~lL~~~P~~Rpsl~~v---L~h~Ff~~g~~p~ 279 (592)
T KOG0575|consen 238 PSHLSAEAKDLIRKLLRPNPSERPSLDEV---LDHPFFKSGFTPA 279 (592)
T ss_pred ccccCHHHHHHHHHHhcCCcccCCCHHHH---hcCHhhhCCCcCC
Confidence 34778999999999999999999997766 6676666665443
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-48 Score=374.48 Aligned_cols=266 Identities=21% Similarity=0.285 Sum_probs=223.8
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.++|+++++||+|+||+||+++.+.+++.||+|++++.. .......|..||..++ |+.|+.+.+.++..+..||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCeEEE
Confidence 578999999999999999999999999999999876543 2345889999999977 5666667667778888999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|+||+ ||.|...++ ..+.|++..+..++.+|+.||.|||++|||||||||+|||| +..|+++|+|||||+.....
T Consensus 103 Vld~~~GGeLf~hL~-~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQ-REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EEeccCCccHHHHHH-hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccC
Confidence 99999 889999998 46689999999999999999999999999999999999999 58999999999999966554
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
... ..+++||+.|||||++.+..|+..+|+||||+++|||++|..||.+ .+..+.+++|...+...
T Consensus 179 ~~~-------t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~---~~~~~~~~~I~~~k~~~---- 244 (357)
T KOG0598|consen 179 GDA-------TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA---EDVKKMYDKILKGKLPL---- 244 (357)
T ss_pred CCc-------cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC---ccHHHHHHHHhcCcCCC----
Confidence 332 3568999999999999999999999999999999999999999987 45567777777766322
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCC----HHHHHHHHHHHHHHcCCCCCCcccccccccccccc
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPD----YAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQV 300 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt----~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~ 300 (474)
...-++.+.++++..+|..||++|-. +.+ -....+....+|+.+.....++
T Consensus 245 ~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~----------ik~HpfF~~inW~~l~~k~l~P 299 (357)
T KOG0598|consen 245 PPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEE----------IKRHPFFKGINWEKLLAKKLSP 299 (357)
T ss_pred CCccCCHHHHHHHHHHhccCHHHhcCCCCChHH----------hhcCcccccCCHHHHHhcCCCC
Confidence 22337899999999999999999953 333 2345677789999887655544
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-48 Score=377.91 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=209.3
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
....++|.+.++||.|+||+||+|+++.++..||||.+..+. ..+.+..|+.+|+.|+ |++|+.+..+...+++.
T Consensus 6 ~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i 84 (429)
T KOG0595|consen 6 MRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFI 84 (429)
T ss_pred ccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeE
Confidence 345678999999999999999999999999999999887654 2345789999999999 56666777788888899
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCC---CeEEEEecCCcc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA---NQVYIIDFGLAK 154 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~---~~vkL~DFGla~ 154 (474)
||||||| ||+|.+++.. .+.+++.+++.++.||+.||++||+++||||||||+||||+..... -.+||+|||+|+
T Consensus 85 ~lVMEyC~gGDLs~yi~~-~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 85 YLVMEYCNGGDLSDYIRR-RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEEEEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999 8999999984 4589999999999999999999999999999999999999864233 679999999999
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
.+..... ..+++|++.|||||++..+.|+.|+|+||+|+|||+|++|+.||...+. .+.+..+....
T Consensus 164 ~L~~~~~--------a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~---~eL~~~~~k~~-- 230 (429)
T KOG0595|consen 164 FLQPGSM--------AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP---KELLLYIKKGN-- 230 (429)
T ss_pred hCCchhH--------HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH---HHHHHHHhccc--
Confidence 8875432 3578999999999999999999999999999999999999999987443 34333332222
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHH
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAY 268 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~ 268 (474)
..++.+...++..+.+++...+..++.+|-++.+
T Consensus 231 ~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~ 264 (429)
T KOG0595|consen 231 EIVPVLPAELSNPLRELLISLLQRNPKDRISFED 264 (429)
T ss_pred cccCchhhhccCchhhhhhHHHhcCccccCchHH
Confidence 2233334455677789999999999999988654
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-48 Score=360.62 Aligned_cols=243 Identities=25% Similarity=0.326 Sum_probs=208.0
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeE-EEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLR-WFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~-~~~~~~~~~~lv 81 (474)
.+|+|+++||.|+||+||++.+..+|..||.|.+..... .+.+..|+.+|++|+|+|+|.++. .+..+.+..+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 359999999999999999999999999999997664432 345889999999999999888887 445566668999
Q ss_pred EecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHH--CC--ccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 82 IDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHS--KS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 82 ~e~~-g~sL~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs--~g--IiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
||+| +|+|.++++. ..+.+++.++|.++.|++.||..+|+ .. |+||||||.||+|+ .+|.|||+||||+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~---~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT---ANGVVKLGDFGLG 175 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc---CCCceeeccchhH
Confidence 9999 8999999863 34569999999999999999999999 45 99999999999994 8899999999999
Q ss_pred cccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (474)
+.+....+. ..+++||+.||+||.+.+.+|+.|+||||+||++|||+.-..||.+. ...+.-.+|.....
T Consensus 176 r~l~s~~tf-------A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~---n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 176 RFLSSKTTF-------AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD---NLLSLCKKIEQGDY 245 (375)
T ss_pred hHhcchhHH-------HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc---cHHHHHHHHHcCCC
Confidence 998876553 34679999999999999999999999999999999999999999985 44455555555544
Q ss_pred cchHHHHh-cCCcHHHHHHHHHHhcCCCCCCCCH
Q 011945 234 STSIEALC-RGYPTEFASYFHYCRSLRFDDKPDY 266 (474)
Q Consensus 234 ~~~~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~ 266 (474)
++ ++ ..++.++..||..|+..|++.||+.
T Consensus 246 ~~----~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 246 PP----LPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred CC----CcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 32 22 3568899999999999999999984
No 10
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=371.24 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=209.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeE-EEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-VAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~-vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
....+.+.||.|+||+||+|.+. |.. ||||++..... ...|.+|+.+|.+|+|+|+|..+..+.......+||
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEE
Confidence 34566778999999999999964 555 99998865432 347999999999999777776555444443378999
Q ss_pred EecC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCCCcEEeeeCCCCC-eEEEEecCCccccc
Q 011945 82 IDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYR 157 (474)
Q Consensus 82 ~e~~-g~sL~~li~~-~~~~l~~~~~~~i~~qi~~gL~yLHs~g-IiHrDIKP~NILl~~~~~~~-~vkL~DFGla~~~~ 157 (474)
|||+ +|+|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++ ..+ ++||+|||+++...
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~---~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD---LKGKTLKIADFGLSREKV 195 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc---CCCCEEEECCCccceeec
Confidence 9999 9999999986 3778999999999999999999999999 99999999999994 665 99999999998765
Q ss_pred cCCCccccccccCCCCccCcccccccccc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHL--GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~--~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
.... ..+...||+.|||||++. ...|+.|+||||||++||||+||+.||.+... .+....+.......
T Consensus 196 ~~~~-------~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---~~~~~~v~~~~~Rp 265 (362)
T KOG0192|consen 196 ISKT-------SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---VQVASAVVVGGLRP 265 (362)
T ss_pred cccc-------cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcCCCC
Confidence 4321 123468999999999999 55899999999999999999999999998764 23333333333222
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
.+...+|+.+..+|..||..||+.||++.+|...|+.+....
T Consensus 266 ---~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 266 ---PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred ---CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 334558999999999999999999999999999999987644
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.5e-46 Score=350.35 Aligned_cols=253 Identities=20% Similarity=0.274 Sum_probs=207.4
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCch----HHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~----~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
++|+.+.++|+|+||+||+|+++.||+.||||.+......+ -..+|+++|++|+|.|.|..+. ++......+||+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiE-VFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIE-VFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHH-HHHhcceeEEEe
Confidence 57999999999999999999999999999999876554433 3688999999999776665554 445666789999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|||..++.+.+......++.+.+..++.|++.|+.|+|+++||||||||+||||+ ..+.+||||||+|+.+..+..
T Consensus 81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gvvKLCDFGFAR~L~~pgd- 156 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGVVKLCDFGFARTLSAPGD- 156 (396)
T ss_pred eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCcEEeccchhhHhhcCCcc-
Confidence 9999999998887777799999999999999999999999999999999999996 889999999999998875332
Q ss_pred cccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc--------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 233 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 233 (474)
.-+.++.|.+|.|||.+.| .+|+..+||||+||++.||++|...|.+..+-+....+.+......
T Consensus 157 ------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 157 ------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred ------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 1145688999999999998 6799999999999999999999999998765444444433322111
Q ss_pred ---------------cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 234 ---------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 234 ---------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
..+++.-...++.-+.+|++.||..||++|++.++++
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence 1122222334456789999999999999999988874
No 12
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-46 Score=368.27 Aligned_cols=259 Identities=23% Similarity=0.304 Sum_probs=218.5
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCch----HHHHHHHHHHHhcCCCCCceeEEEeEe-CCE
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGTGIPNLRWFGVE-GDY 77 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~----~l~~E~~il~~l~~~~~i~~l~~~~~~-~~~ 77 (474)
++-.+.|+.+++||+|.||.||+|++..+|+.||+|.+..+...+ ...+|+.||++|.|+++|.....+... ...
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 345567999999999999999999999999999999877655333 468999999999988777776666555 578
Q ss_pred EEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 78 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+|||+|||..+|..++....-+|++.++..|+.||+.||+|||++||+|||||.+|||| |.+|.+||+|||||+.+.
T Consensus 193 iYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 193 IYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeecc
Confidence 99999999999999998777789999999999999999999999999999999999999 689999999999999887
Q ss_pred cCCCccccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc---
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV--- 233 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--- 233 (474)
...... .+..+-|..|.|||.++|.. |+..+|+||.||||.||++|++.|++.+..+...++.+++...-
T Consensus 270 ~~~~~~------~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~ 343 (560)
T KOG0600|consen 270 PSGSAP------YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDY 343 (560)
T ss_pred CCCCcc------cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhc
Confidence 654321 24567899999999999865 99999999999999999999999999766555555555542111
Q ss_pred ------------------cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 234 ------------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 234 ------------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
...+.+.+..+|....+|+..+|.+||++|.|+.+++
T Consensus 344 W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 344 WPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred cccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 1123344567789999999999999999999988764
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-46 Score=370.38 Aligned_cols=264 Identities=23% Similarity=0.313 Sum_probs=213.3
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc-hH--HHHHHHHHHHhcCCCCCcee-EEEeEeCCEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-PQ--LQYEAKLYKILQGGTGIPNL-RWFGVEGDYNV 79 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-~~--l~~E~~il~~l~~~~~i~~l-~~~~~~~~~~~ 79 (474)
.+-++|.++++||.|+||.||+|+.+.+++.||||.++.+-.. ++ -.+|++.|++|+.|++|..+ ..+.+.+...+
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 3457899999999999999999999999999999987655332 22 47899999999955555555 44444444999
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 80 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 80 lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
+|||||..+|+++++..++.|++..+..|+.||++||+|+|.+|+.||||||+|||+. ....|||+|||+|+.....
T Consensus 87 fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~---~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 87 FVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS---GNDVIKIADFGLAREVRSK 163 (538)
T ss_pred eeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec---ccceeEecccccccccccC
Confidence 9999999999999998888899999999999999999999999999999999999994 5889999999999987654
Q ss_pred CCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc------
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------ 232 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~------ 232 (474)
. || +.++.|..|.|||+++. .-|+.+.|||++|||++|+.+-+..|.|....+...++-.+....
T Consensus 164 p-----PY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 164 P-----PY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred C-----Cc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 3 23 45789999999999886 458999999999999999999999999865544333333322111
Q ss_pred ----------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 233 ----------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 233 ----------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
....+..+...++.++.++|..|+.+||++|||++++ |+..|-+.+
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~a---l~~pffq~~ 297 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQA---LQHPFFQVG 297 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHH---hcCcccccc
Confidence 1223445556678999999999999999999998877 445544443
No 14
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-45 Score=344.67 Aligned_cols=270 Identities=21% Similarity=0.293 Sum_probs=229.4
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
-.++|++++.||.|+||.|.+++.+.+|..+|+|+++.... .+...+|..+|+.+. ++.+..+.+.+.+..+.+
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEE
Confidence 35689999999999999999999999999999999876532 234788999999998 677778888888999999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
|||||. ||-|..+++.+ ++|++..++.++.||+.||+|||+++|++|||||+|||| +.+|.+||+|||+|+....
T Consensus 121 mvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecC
Confidence 999999 89999999854 589999999999999999999999999999999999999 6899999999999998776
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
.. -+.|||+.|+|||++...+++..+|.|+|||++|||+.|..||...+. .+.|++|.+.+..
T Consensus 197 rT----------~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~---~~iY~KI~~~~v~---- 259 (355)
T KOG0616|consen 197 RT----------WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP---IQIYEKILEGKVK---- 259 (355)
T ss_pred cE----------EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh---HHHHHHHHhCccc----
Confidence 43 357999999999999999999999999999999999999999987543 7888888887764
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccccccccCC
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVST 302 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~~ 302 (474)
++..+++++++|+..+|+.|-.+|- ..+..--+++ .+.++....+|.....+..+.+.
T Consensus 260 -fP~~fs~~~kdLl~~LL~vD~t~R~--gnlknG~~dI---k~H~wF~~v~W~~i~~r~ie~P~ 317 (355)
T KOG0616|consen 260 -FPSYFSSDAKDLLKKLLQVDLTKRF--GNLKNGVEDI---KNHPWFKGVDWEAILQRKIEPPF 317 (355)
T ss_pred -CCcccCHHHHHHHHHHHhhhhHhhh--cCcCCCcccc---ccCcccccccHHHHhhccccCCC
Confidence 3466789999999999999999982 1122122222 34567778999988766555544
No 15
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=360.85 Aligned_cols=260 Identities=24% Similarity=0.395 Sum_probs=207.4
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCC-EEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD-YNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~-~~~lv~e 83 (474)
.+|...+.||+|+||.||++.+..+|+.+|||.+..... .+.+.+|+.+|..|+|+++|..+........ .++|.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 458889999999999999999999999999998765411 3458999999999995555555443334343 7899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC-CCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~-~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++...+.+|++..+..++.||+.||+|||++|||||||||+|||++ . ++.+||+|||+++.......
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~---~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD---PSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe---CCCCeEEeccCccccccccccc
Confidence 99 9999999987665899999999999999999999999999999999999995 5 68999999999987764111
Q ss_pred ccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. ......+.||+.|||||++.+ ....+++|||||||++.||+||+.||.+. ......+..+.... ..+.+
T Consensus 174 ~----~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~---~~P~i 244 (313)
T KOG0198|consen 174 K----SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGRED---SLPEI 244 (313)
T ss_pred c----ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccC---CCCCC
Confidence 1 112345789999999999995 34556999999999999999999999874 22223333333322 22356
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
+..++++.++||..|+..||++|||+++| |++.|....
T Consensus 245 p~~ls~~a~~Fl~~C~~~~p~~Rpta~eL---L~hpf~~~~ 282 (313)
T KOG0198|consen 245 PDSLSDEAKDFLRKCFKRDPEKRPTAEEL---LEHPFLKQN 282 (313)
T ss_pred CcccCHHHHHHHHHHhhcCcccCcCHHHH---hhChhhhcc
Confidence 67799999999999999999999998776 667765553
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-44 Score=364.33 Aligned_cols=247 Identities=26% Similarity=0.335 Sum_probs=210.1
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-------CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCC
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-------TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 76 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-------~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~ 76 (474)
...++|++++.||+|+||.|++|.+..+++.||||+++.+ ...+.+.+|+.+++.+.+|++|..+..+.....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3457899999999999999999999999999999987664 234567789999999996767777777777777
Q ss_pred EEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCC-CeEEEEecCCcc
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA-NQVYIIDFGLAK 154 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~-~~vkL~DFGla~ 154 (474)
..++||||+ ||.|.+++.. .+++.+..+..++.||+.|++|||++||+||||||+|||++ .+ +.+||+|||++.
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld---~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD---GNEGNLKLSDFGLSA 169 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec---CCCCCEEEecccccc
Confidence 799999999 7799999986 78899999999999999999999999999999999999995 55 999999999998
Q ss_pred ccc-cCCCccccccccCCCCccCccccccccccCCC-CC-chhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc
Q 011945 155 RYR-DTATHQHIPYRENKNLTGTARYASMNTHLGIE-QS-RRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 231 (474)
Q Consensus 155 ~~~-~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s-~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~ 231 (474)
... ... ...+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|.+||.+. +....+.+|...
T Consensus 170 ~~~~~~~--------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~---~~~~l~~ki~~~ 238 (370)
T KOG0583|consen 170 ISPGEDG--------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS---NVPNLYRKIRKG 238 (370)
T ss_pred ccCCCCC--------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc---cHHHHHHHHhcC
Confidence 774 221 236789999999999999987 75 8999999999999999999999873 344455555444
Q ss_pred cccchHHHHhcCC-cHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 232 KVSTSIEALCRGY-PTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 232 ~~~~~~~~l~~~~-p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.+. ++..+ ++++..|+.+||..||.+|+++.+|.
T Consensus 239 ~~~-----~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 239 EFK-----IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred Ccc-----CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 432 23445 89999999999999999999977775
No 17
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.6e-44 Score=362.25 Aligned_cols=273 Identities=21% Similarity=0.303 Sum_probs=217.1
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.++|++++.||+|+||+||+|+.+.||+.+|+|++++... ...+..|-.+|.. ...+.|+.+++.+++.++.||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCeeEE
Confidence 4689999999999999999999999999999999876543 2347889999988 557888888888999999999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
+|||+ ||++..++.. .+.|++..+..++.+++.||+.||+.|||||||||+|+|| +..|++||+|||||..+...
T Consensus 219 iMEylPGGD~mTLL~~-~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR-KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHh-cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhhh
Confidence 99999 9999999973 5689999999999999999999999999999999999999 69999999999999754321
Q ss_pred CCc------------------ccccc----c------------------cCCCCccCccccccccccCCCCCchhhHHHH
Q 011945 160 ATH------------------QHIPY----R------------------ENKNLTGTARYASMNTHLGIEQSRRDDLESL 199 (474)
Q Consensus 160 ~~~------------------~~~~~----~------------------~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSl 199 (474)
... ...+. + -....+|||.|||||++.+..|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 000 00010 0 1234689999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 200 GYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 200 Gvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
||||||||.|.+||.+.+. .+.+.+|..-+..-..+ -...++++.++||.+|+. ||++|-...-+.++
T Consensus 375 G~ImyEmLvGyPPF~s~tp---~~T~rkI~nwr~~l~fP-~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EI------- 442 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETP---QETYRKIVNWRETLKFP-EEVDLSDEAKDLITRLLC-DPENRLGSKGAEEI------- 442 (550)
T ss_pred HHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhhhccCC-CcCcccHHHHHHHHHHhc-CHHHhcCcccHHHH-------
Confidence 9999999999999988544 44555554322111110 013456999999999999 99999763222222
Q ss_pred cCCCCCCccccccccc
Q 011945 280 EGFQFDYVFDWTILKY 295 (474)
Q Consensus 280 ~~~~~~~~~dw~~~~~ 295 (474)
...++...++|+-+..
T Consensus 443 K~HPfF~~v~W~~l~~ 458 (550)
T KOG0605|consen 443 KKHPFFKGVDWDHLRE 458 (550)
T ss_pred hcCCccccCCcchhhc
Confidence 2347778899998754
No 18
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-44 Score=362.83 Aligned_cols=253 Identities=24% Similarity=0.356 Sum_probs=208.9
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc-hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+++++.||+|.||+||+|.+. ....||+|.++..... ..|.+|+++|++|+|.+ |+.+++++..++..+|||||+ .
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~-lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEK-LVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCcccC-eEEEEEEEecCCceEEEEEeccc
Confidence 456789999999999999973 3448999988775544 67899999999999655 455555566666899999999 8
Q ss_pred CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 87 PSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 87 ~sL~~li~~-~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
|+|.+++.. ....+...+.+.++.|||+||+||+++++|||||-..||||+ ++..+||+|||||+...++...
T Consensus 286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~---~~~~vKIsDFGLAr~~~d~~Y~--- 359 (468)
T KOG0197|consen 286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD---EDLVVKISDFGLARLIGDDEYT--- 359 (468)
T ss_pred CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec---cCceEEEcccccccccCCCcee---
Confidence 999999986 456799999999999999999999999999999999999994 7889999999999965554432
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCC
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 244 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 244 (474)
......-...|.|||.+....++.|||||||||+||||+| |+.||.++... +.++.+..... -..+..|
T Consensus 360 ---~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~---ev~~~le~GyR----lp~P~~C 429 (468)
T KOG0197|consen 360 ---ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE---EVLELLERGYR----LPRPEGC 429 (468)
T ss_pred ---ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH---HHHHHHhccCc----CCCCCCC
Confidence 2223344678999999999999999999999999999999 99999986553 33333333222 1224679
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 245 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 245 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
|+++.++|..||..+|++||||+.+...|++++..
T Consensus 430 P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 430 PDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999998754
No 19
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-44 Score=366.55 Aligned_cols=272 Identities=22% Similarity=0.284 Sum_probs=228.3
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
-.++|.++++||+|+||+|+++..+.+++.+|||++++.. ..+.+..|.+|+.....|+.+..++.+++..++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 3578999999999999999999999999999999887653 34568899999999999999999999999999999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+||||+ ||++..+. ..+.|++..+..++..|+.||+|||++||||||||.+|||+ |..|++||+|||+++....
T Consensus 446 fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccCC
Confidence 999999 66633333 25689999999999999999999999999999999999999 6899999999999997553
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
... ...+++||+.|||||++.+..|+..+|+|||||+|||||.|..||.+.+ ..+.+..|.......
T Consensus 521 ~g~-------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd---Eee~FdsI~~d~~~y--- 587 (694)
T KOG0694|consen 521 QGD-------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD---EEEVFDSIVNDEVRY--- 587 (694)
T ss_pred CCC-------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHhcCCCCC---
Confidence 222 2467899999999999999999999999999999999999999999854 345555555544332
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCH-----HHHHHHHHHHHHHcCCCCCCccccccccccccccCCCCCc
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDY-----AYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVSTPARA 306 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~-----~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~~p~~~ 306 (474)
+..++.+..++|+.+|..+|++|-.+ ++|. . ..+....||+.+...+.+++..+..
T Consensus 588 --P~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~---~-------hpFFr~i~w~~L~~r~i~PPf~P~i 648 (694)
T KOG0694|consen 588 --PRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIK---K-------HPFFRSIDWDDLLNRRIKPPFVPTI 648 (694)
T ss_pred --CCcccHHHHHHHHHHhccCcccccCCCCCCchhhh---h-------CCccccCCHHHHhhccCCCCCCccc
Confidence 35678999999999999999999765 2222 1 2556678999998887777665443
No 20
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.3e-43 Score=357.41 Aligned_cols=261 Identities=18% Similarity=0.316 Sum_probs=203.3
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEc-----CCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCcee-EEEeEeC
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNL-RWFGVEG 75 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l-~~~~~~~ 75 (474)
-.++|++.++||+|+||.||+|.+. .+++.||||++..... ...+..|+.++..+.+|++|..+ ..+...+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4578999999999999999999752 3457899998864332 24588899999999545555555 4444455
Q ss_pred CEEEEEEecC-CCCHHHHHHHcC---------------------------------------------------------
Q 011945 76 DYNVLVIDLL-GPSLEDLFNFCS--------------------------------------------------------- 97 (474)
Q Consensus 76 ~~~~lv~e~~-g~sL~~li~~~~--------------------------------------------------------- 97 (474)
...+++|||+ +++|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 6688999999 899999986421
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccccCCCC
Q 011945 98 ----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNL 173 (474)
Q Consensus 98 ----~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~ 173 (474)
..+++.+++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++........ ......
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~-----~~~~~~ 236 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDY-----VRKGSA 236 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcch-----hcccCC
Confidence 2478889999999999999999999999999999999994 6789999999999865432211 112334
Q ss_pred ccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHH
Q 011945 174 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYF 252 (474)
Q Consensus 174 ~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li 252 (474)
.++..|+|||++.+..++.++|||||||+||||++ |..||.+..... .....+..... ......+++++.+++
T Consensus 237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~l~~li 310 (338)
T cd05102 237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EFCQRLKDGTR----MRAPENATPEIYRIM 310 (338)
T ss_pred CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HHHHHHhcCCC----CCCCCCCCHHHHHHH
Confidence 56789999999999999999999999999999997 999998754321 11122221111 112356789999999
Q ss_pred HHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 253 HYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 253 ~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
..||..||++||++.+|++.|++++.+
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999998753
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=358.89 Aligned_cols=253 Identities=21% Similarity=0.355 Sum_probs=210.9
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
..|....+||+|+.|.||.+....+++.||||.++... ..+-+..|+.+|+.++|.|+|.++..|... +..|+||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-DELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-ceeEEEEee
Confidence 56888999999999999999999999999999876543 345589999999999988888888666555 678999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 85 ~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+ |++|.|++.. ..+++.++..|+.+++.||+|||.+||||||||.+|||++ .++.+||+|||+|..+......
T Consensus 352 m~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~---~~g~vKltDFGFcaqi~~~~~K- 425 (550)
T KOG0578|consen 352 MEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT---MDGSVKLTDFGFCAQISEEQSK- 425 (550)
T ss_pred cCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---cCCcEEEeeeeeeeccccccCc-
Confidence 9 9999999973 3599999999999999999999999999999999999995 7788999999999988776542
Q ss_pred ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
..+.+||+.|||||+.....|++|+||||||+|++||+.|++||-..+. .+.+..|..... +.-.....
T Consensus 426 ------R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P---lrAlyLIa~ng~--P~lk~~~k 494 (550)
T KOG0578|consen 426 ------RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP---LRALYLIATNGT--PKLKNPEK 494 (550)
T ss_pred ------cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh---HHHHHHHhhcCC--CCcCCccc
Confidence 2578999999999999999999999999999999999999999976333 222222222111 11122356
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
++++|++|+.+||..|+++|+++.+| |++-|.+.
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eL---L~HpFl~~ 528 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKEL---LEHPFLKM 528 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHH---hcChhhhh
Confidence 88999999999999999999997766 66666543
No 22
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3e-42 Score=339.34 Aligned_cols=268 Identities=17% Similarity=0.215 Sum_probs=205.8
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.++..+.|++++ .+..+...+...+++|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv-~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVV-SLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEE-EEEEEEccCCeEEEEE
Confidence 4889999999999999999999999999999875432 123467899999999865544 4555556677889999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCC
Confidence 998 78998887643 3469999999999999999999999999999999999999 477899999999998654322
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. .....||..|+|||++.+..++.++|||||||++|||++|+.||...........+..... .....+
T Consensus 157 ~--------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~----~~~~~~ 224 (285)
T cd05631 157 T--------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK----EDQEEY 224 (285)
T ss_pred e--------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh----cccccC
Confidence 1 1235789999999999999999999999999999999999999987544322222222111 111223
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHH--HHHHHHHHHHHcCCCCCCcccccccccccc
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAY--LKRLFRDLFIREGFQFDYVFDWTILKYQQS 298 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~--l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~ 298 (474)
...+++++.+|+..||+.||++||++.+ +.+++++.+ ....+|..+...+.
T Consensus 225 ~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~-------~~~~~~~~~~~~~~ 277 (285)
T cd05631 225 SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPI-------FKNINFKRLEANML 277 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHh-------hcCCCHHHHHhCcC
Confidence 4568899999999999999999997321 223344433 33456776654433
No 23
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.6e-43 Score=354.97 Aligned_cols=252 Identities=22% Similarity=0.332 Sum_probs=214.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+.... ..+.+|++|++.|+|+++|..+.+|.. ....|+|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt-~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET-SAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc-cceEEEEe
Confidence 5799999999999999999999999999999987654322 348999999999998888877777654 45679999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||+-++|..++. .+++++++.+..|+.|++.||.|||+.+|+|||+||.|||+ +..+.+|+||||+|+.+.....
T Consensus 81 e~a~g~L~~il~-~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~- 155 (808)
T KOG0597|consen 81 EYAVGDLFTILE-QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS- 155 (808)
T ss_pred hhhhhhHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce-
Confidence 999779999998 46789999999999999999999999999999999999999 5899999999999998765332
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
......||+.|||||+..+.+|+..+|+||||||+||++.|++||.. ....+....|.......+ .
T Consensus 156 ------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a---~si~~Lv~~I~~d~v~~p-----~ 221 (808)
T KOG0597|consen 156 ------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA---RSITQLVKSILKDPVKPP-----S 221 (808)
T ss_pred ------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH---HHHHHHHHHHhcCCCCCc-----c
Confidence 12456899999999999999999999999999999999999999975 455666666665544432 2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
..+..|..|++.+|.+||..|.+..++ +.+.|.+..
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~L---l~HpF~k~~ 257 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDL---LGHPFWKGK 257 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHH---hcChHHhhh
Confidence 567899999999999999999997665 556665543
No 24
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5e-42 Score=338.26 Aligned_cols=253 Identities=19% Similarity=0.245 Sum_probs=199.9
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|++.++||.|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.++|+++ ..+..+.......++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANI-VTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCE-eeEEEEEcCCCeEEEEEe
Confidence 57999999999999999999999999999999876432 23457899999999986554 455555666778999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 84 ~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
|+.++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 84 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~~~-- 158 (288)
T cd07871 84 YLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTK-- 158 (288)
T ss_pred CCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCCCc--
Confidence 99889999998666678999999999999999999999999999999999999 4778999999999976433221
Q ss_pred ccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc--------
Q 011945 164 HIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS-------- 234 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-------- 234 (474)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+.........
T Consensus 159 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 159 -----TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred -----cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence 1133478999999999876 46899999999999999999999999875432222222111110000
Q ss_pred --------------chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 235 --------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 235 --------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.........++.++.+||..||.+||.+|||+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 001112235678899999999999999999988875
No 25
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5e-42 Score=344.17 Aligned_cols=240 Identities=20% Similarity=0.256 Sum_probs=201.4
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+|++++.||+|+||.||+|.+..+++.||||++... .....+..|..++..+.+++++..+..+....+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999987643 123457789999999998888988888888888999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 81 EYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCEEEeecCcceecCCCCC
Confidence 999 8899988874 45789999999999999999999999999999999999994 678999999999875332211
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......||..|+|||++.+..++.++|||||||++|||++|+.||.+.. ....+..+..... .+.
T Consensus 157 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~---~~~~~~~i~~~~~-----~~~ 221 (324)
T cd05587 157 -------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDELFQSIMEHNV-----SYP 221 (324)
T ss_pred -------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCC-----CCC
Confidence 1134579999999999999999999999999999999999999998643 3344444443322 223
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDY 266 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~ 266 (474)
..+++++.+++..||..||.+|++.
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 5678999999999999999999986
No 26
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-44 Score=352.22 Aligned_cols=254 Identities=21% Similarity=0.327 Sum_probs=212.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
...|..++.||+|+||.||+|.+..+++.||||++..+... +.++.|+.+|..+++ ++|..++.....+...+++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~-~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS-PNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc-chHHhhhhheeecccHHHHH
Confidence 45688899999999999999999999999999998876544 458899999999986 55656666667888899999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||| ||++.++++. +..+.+..+..|+.+++.||.|||.++.+|||||+.|||+. ..+.|||+|||++..+.....
T Consensus 91 ey~~gGsv~~lL~~-~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKS-GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHhcCcchhhhhcc-CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEecceeeeeechhh
Confidence 999 8999999983 44569999999999999999999999999999999999996 559999999999987766543
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
...+++||+.|||||++.+..|+.|+||||||++.+||++|.+||..+.+... .........+.+.
T Consensus 167 -------rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv-------lflIpk~~PP~L~ 232 (467)
T KOG0201|consen 167 -------RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV-------LFLIPKSAPPRLD 232 (467)
T ss_pred -------ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE-------EEeccCCCCCccc
Confidence 12678999999999999988999999999999999999999999998766211 1111122223344
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
..+++.|++||..||++||+.||++.+| |.+-|++..
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~L---LKh~FIk~a 269 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKEL---LKHKFIKRA 269 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHH---hhhHHHHhc
Confidence 5788999999999999999999998776 555565553
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-43 Score=356.70 Aligned_cols=252 Identities=20% Similarity=0.294 Sum_probs=213.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
-+.|++++.||.|+-|.|-+|++..||+.+|||++..... ...+.+|+.||+.|.|+|++..+ .......++|+
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~Ly-dVwe~~~~lyl 89 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLY-DVWENKQHLYL 89 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeee-eeeccCceEEE
Confidence 4679999999999999999999999999999999876522 23589999999999966655554 44556667777
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|.||+ ||-|.+++- ..+++++.++..++.||+.|+.|+|..+|+||||||+|+||+ ..+.+||+|||+|..-...
T Consensus 90 vlEyv~gGELFdylv-~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd---~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLV-RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLD---VKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EEEecCCchhHHHHH-hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhh---cccCEeeeccceeecccCC
Confidence 78877 899999887 367899999999999999999999999999999999999994 6667999999999865544
Q ss_pred CCccccccccCCCCccCccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
.. ..+.||++.|+|||++.|.+| +.++||||+|||||.||+|++||.+ ++....+.++....+.
T Consensus 166 kl--------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD---dNir~LLlKV~~G~f~---- 230 (786)
T KOG0588|consen 166 KL--------LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD---DNIRVLLLKVQRGVFE---- 230 (786)
T ss_pred cc--------ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC---ccHHHHHHHHHcCccc----
Confidence 32 356799999999999999997 6899999999999999999999985 4566777777776664
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
++..+|.+.++||.+||..||+.|.|.++| |.+.|....
T Consensus 231 -MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI---~kHP~l~g~ 269 (786)
T KOG0588|consen 231 -MPSNISSEAQDLLRRMLDVDPSTRITTEEI---LKHPFLSGY 269 (786)
T ss_pred -CCCcCCHHHHHHHHHHhccCccccccHHHH---hhCchhhcC
Confidence 347899999999999999999999997766 666665443
No 28
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-42 Score=337.34 Aligned_cols=266 Identities=20% Similarity=0.303 Sum_probs=213.8
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.-.+.|++...||.|..++||+|+.+.+++.||||+++.+.. .+.+.+|+..+..+.|+| |..++..+..+...|+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPN-Iv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPN-IVTYHCSFVVDSELWV 101 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCC-cceEEEEEEecceeEE
Confidence 346789999999999999999999999999999999876543 356899999999888555 5555556677778899
Q ss_pred EEecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 81 VIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
||.|| +|++.++++.. ...|++..+..|+.++++||.|||.+|.||||||+.|||| +.+|.|||+|||.+..+.+
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFD 178 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeecc
Confidence 99999 99999999743 4459999999999999999999999999999999999999 5899999999999877766
Q ss_pred CCCccccccccCCCCccCccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc--
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS-- 234 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-- 234 (474)
....+ .++. +.++||+.|||||++.. ..|+.|+||||||++..||.+|..||..+.+ .+..+.++......
T Consensus 179 ~G~R~--~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP--mkvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 179 SGDRQ--VTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP--MKVLLLTLQNDPPTLL 253 (516)
T ss_pred cCcee--eEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh--HHHHHHHhcCCCCCcc
Confidence 54322 2333 78899999999999654 3599999999999999999999999988754 23333343332221
Q ss_pred --chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 235 --TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 235 --~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
.......+.++..|.+++..||.+||.+||+++++ |.+.|-+..
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskL---lkh~FFk~~ 299 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKL---LKHAFFKKA 299 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHH---hccHHHhhc
Confidence 11122235678899999999999999999998876 555555444
No 29
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.5e-42 Score=344.72 Aligned_cols=238 Identities=20% Similarity=0.297 Sum_probs=198.5
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+..|+.+++.++|++++..+ .+...+...++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~-~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMM-CSFQDENRVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEE-EEEEcCCEEEE
Confidence 478999999999999999999999999999999876431 234578999999999866555544 45567778999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
+|||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 96 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 96 LLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCC
Confidence 99998 8899999874 4578999999999999999999999999999999999999 47889999999999866432
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
. ....||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+......
T Consensus 172 ~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~----- 233 (329)
T PTZ00263 172 T----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT---PFRIYEKILAGRLK----- 233 (329)
T ss_pred c----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC---HHHHHHHHhcCCcC-----
Confidence 2 23579999999999999999999999999999999999999997643 33444444443321
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDY 266 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~ 266 (474)
+...++..+.+||..||..||.+||+.
T Consensus 234 ~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 234 FPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 234578899999999999999999973
No 30
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.4e-43 Score=332.24 Aligned_cols=253 Identities=19% Similarity=0.232 Sum_probs=206.6
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCch----HHHHHHHHHHHhcCCCCCceeEE--EeEeCCEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLQYEAKLYKILQGGTGIPNLRW--FGVEGDYNVL 80 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~----~l~~E~~il~~l~~~~~i~~l~~--~~~~~~~~~l 80 (474)
+.|+.+.+|++|+||.||+|+|+.|++.||+|.++.+.... .-.+|+.+|.+++| ++|+.+.. .+..-+..||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H-~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARH-PNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCC-CCeeeeEEEEeccccceeee
Confidence 56899999999999999999999999999999887765433 36899999999994 55555533 3556677999
Q ss_pred EEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 81 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 81 v~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||||..+|..+++....+|...++..++.|++.||+|||.+.|+||||||+|+|++ ..|.+||+|||+|+.+..+.
T Consensus 155 VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~---~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 155 VMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS---HKGILKIADFGLAREYGSPL 231 (419)
T ss_pred eHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec---cCCcEEecccchhhhhcCCc
Confidence 999999999999998888999999999999999999999999999999999999994 88999999999999987753
Q ss_pred CccccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc----cc-
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK----VS- 234 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~----~~- 234 (474)
. ..+..+-|..|.|||.++|.. |+...|+||+|||+.||+++++.|.+....+...++.++.... ++
T Consensus 232 k-------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 232 K-------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred c-------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 2 224567899999999999865 9999999999999999999999999866554444444433211 00
Q ss_pred --------------chHHHHh---c--CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 235 --------------TSIEALC---R--GYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 235 --------------~~~~~l~---~--~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.+...+. . ++++.-.+|+..+|.+||.+|.|+++.+
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L 359 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGL 359 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhh
Confidence 0001111 1 1347778999999999999999988763
No 31
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.9e-42 Score=339.67 Aligned_cols=236 Identities=22% Similarity=0.346 Sum_probs=196.6
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.|++++ .+..+..+....+++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFII-RLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHh-hhHhhhccCCeEEEE
Confidence 47999999999999999999999999999999875432 234578899999999865554 444556677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 80 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 80 MEYVPGGELFSYLRN-SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCCc
Confidence 9998 8899999874 4579999999999999999999999999999999999999 467899999999998664321
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
....||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+..... .+
T Consensus 156 ----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~-----~~ 217 (291)
T cd05612 156 ----------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN---PFGIYEKILAGKL-----EF 217 (291)
T ss_pred ----------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCc-----CC
Confidence 23579999999999999999999999999999999999999998743 3334444443332 12
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCC
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPD 265 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt 265 (474)
...++..+.++|.+||+.||.+||+
T Consensus 218 ~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 218 PRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred CccCCHHHHHHHHHHcCCCHHHccC
Confidence 3456889999999999999999995
No 32
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.1e-42 Score=321.81 Aligned_cols=253 Identities=19% Similarity=0.226 Sum_probs=207.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.+|...++||+|.||.||+|++..+|+.||||.++..... -...+|++.|+.++|.++|..++ ++......-||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD-~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELID-VFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhh-hccCCCceEEEE
Confidence 5789999999999999999999999999999988765433 35899999999999666555554 455666678999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||+..+|+.+++.....++...+..++.+++.||+|||++.|+||||||.|+||+ .++.+||+|||+|+.+......
T Consensus 81 Efm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 81 EFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred EeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEeecccchhccCCCCcc
Confidence 9999999999998788899999999999999999999999999999999999995 8899999999999998765542
Q ss_pred cccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc-------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS------- 234 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------- 234 (474)
. ...+-|..|.|||.+.|.. |+..+||||.|||+.||+.|.+-|.|..+-+....+..+......
T Consensus 158 ~-------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 158 Q-------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred c-------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccc
Confidence 2 1226799999999999854 899999999999999999999999886654444333333221111
Q ss_pred -------------chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 235 -------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 235 -------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.....+....+.+..+|+..||.+||.+|.++.+++
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL 279 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQAL 279 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHh
Confidence 111223345567889999999999999999987764
No 33
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=9.9e-42 Score=342.92 Aligned_cols=255 Identities=18% Similarity=0.233 Sum_probs=197.3
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEe----CCEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVE----GDYNV 79 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~----~~~~~ 79 (474)
+|++.++||+|+||.||+|.+..+++.||||.+.... ....+.+|+.+++.++|++++..+..+... ....|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 6999999999999999999999999999999876421 223578899999999977766655544322 23579
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 80 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 80 lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
++|||++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 81 lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccccc
Confidence 9999999999999874 4569999999999999999999999999999999999999 47889999999999865432
Q ss_pred CCccccccccCCCCccCccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH---------
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI--------- 228 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~--~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i--------- 228 (474)
.... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+...
T Consensus 157 ~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 157 TPTA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cCcc----ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 2111 01134579999999999876 57899999999999999999999999764422111111110
Q ss_pred --------------hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 229 --------------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 229 --------------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
...............+++++.+++.+||..||++||++++++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l 288 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL 288 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHh
Confidence 011111122223346788999999999999999999987774
No 34
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.1e-41 Score=334.92 Aligned_cols=254 Identities=19% Similarity=0.208 Sum_probs=198.9
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+.+++.++|++++.. ..+.......++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~-~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVEL-KEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccch-hhhEecCCEEEEEE
Confidence 57999999999999999999999999999999876432 23457889999999987665554 44556677899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||+.+++.+.+......+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccCcccccccccc
Confidence 9997676666655556799999999999999999999999999999999999994 7789999999999876432211
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc--------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS-------- 234 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-------- 234 (474)
......||..|+|||++.+..++.++|||||||++|||++|+.||.+.........+..+......
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 157 ------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred ------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 112457899999999999989999999999999999999999999875432222222211100000
Q ss_pred ----------------chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 235 ----------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 235 ----------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.........++.++.+||.+||..||++||++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l 282 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000111234678899999999999999999988765
No 35
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.6e-42 Score=356.23 Aligned_cols=210 Identities=24% Similarity=0.342 Sum_probs=180.7
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhc-----CCCCCceeEEEeEeCCE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQ-----GGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~-----~~~~i~~l~~~~~~~~~ 77 (474)
.+..+|.|++.||+|+||.|.+|.+..|++.||||+++.+. ...+-..|+.+|..|+ +..++..+..++....+
T Consensus 183 ~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 183 HIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred eeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 34568999999999999999999999999999999987654 3466788999999998 23467777888899999
Q ss_pred EEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 78 NVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
.|||+|++..+|+++++..+ ..|+...+..|+.||+.||.+||+.||||+||||+||||..- ....|||+|||.|...
T Consensus 263 lciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~-~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDP-KRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccC-CcCceeEEeccccccc
Confidence 99999999999999998543 459999999999999999999999999999999999999643 3348999999999866
Q ss_pred ccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHH
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK 224 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 224 (474)
.+... .++.+..|.|||+++|.+|+.+.||||||||+.||++|.+.|.|....+....
T Consensus 342 ~q~vy----------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~ 399 (586)
T KOG0667|consen 342 SQRVY----------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLAR 399 (586)
T ss_pred CCcce----------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHH
Confidence 54322 45778999999999999999999999999999999999999988655443333
No 36
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.8e-41 Score=335.21 Aligned_cols=252 Identities=20% Similarity=0.259 Sum_probs=197.4
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.++|++.++||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.+.|++++ .+..+...+...++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIV-LLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcC-eEEEEEecCCeEEEEE
Confidence 4689999999999999999999999999999998764322 23577899999999866554 5555566778899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||++++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~- 158 (303)
T cd07869 83 EYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVPSH- 158 (303)
T ss_pred ECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCCCc-
Confidence 999999999987666679999999999999999999999999999999999999 4778999999999975432211
Q ss_pred cccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc--------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 233 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 233 (474)
......||..|+|||++.+. .++.++|||||||++|||++|..||.+... ....+..+.....
T Consensus 159 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD--IQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred ------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHHhCCCChhhcc
Confidence 11335789999999998764 589999999999999999999999987543 2222222211000
Q ss_pred -----------------cchHHHHh--cCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 234 -----------------STSIEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 234 -----------------~~~~~~l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
........ ..+++.+.+|+..||+.||++||++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l 286 (303)
T cd07869 231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAAL 286 (303)
T ss_pred chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHh
Confidence 00000001 12457889999999999999999977663
No 37
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.4e-42 Score=345.78 Aligned_cols=246 Identities=21% Similarity=0.315 Sum_probs=199.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|+++++||+|+||.||+|++..+++.||||++.... ....+..|+.++..+.| ++|..+..+.......|||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS-EWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC-CCCccEEEEEEcCCEEEEE
Confidence 57999999999999999999999999999999876432 23457889999999985 4555555666778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++......
T Consensus 80 ~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~~- 154 (333)
T cd05600 80 MEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVTY- 154 (333)
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCcccccc-
Confidence 9999 8899999974 4579999999999999999999999999999999999999 47789999999999865431
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc---cchH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV---STSI 237 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~---~~~~ 237 (474)
.....||+.|+|||++.+..++.++|||||||+||||++|..||.+.... +.+..+..... ....
T Consensus 155 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~ 222 (333)
T cd05600 155 ---------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN---ETWENLKYWKETLQRPVY 222 (333)
T ss_pred ---------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH---HHHHHHHhccccccCCCC
Confidence 23457999999999999999999999999999999999999999875432 22222221110 0100
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
......+++++.++|..||..+|++||++.+++
T Consensus 223 ~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll 255 (333)
T cd05600 223 DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIK 255 (333)
T ss_pred CccccccCHHHHHHHHHHhhChhhhcCCHHHHH
Confidence 001125689999999999999999999976664
No 38
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.3e-41 Score=337.59 Aligned_cols=261 Identities=18% Similarity=0.268 Sum_probs=199.0
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcC----------------CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCC
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ----------------TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGI 65 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~----------------~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i 65 (474)
..++|++.++||+|+||.||+|.+.. ++..||||++..... ...+.+|+.++..++|++ |
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n-i 81 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPN-I 81 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCC-e
Confidence 45789999999999999999998532 345799998865432 235889999999998655 4
Q ss_pred ceeEEEeEeCCEEEEEEecC-CCCHHHHHHHcC------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Q 011945 66 PNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS------------------RKLSLKTVLMLADQMINRVEFVHSKSFLH 126 (474)
Q Consensus 66 ~~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~------------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiH 126 (474)
..+..++......+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 45555556667789999998 889999986421 23678899999999999999999999999
Q ss_pred cCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHH
Q 011945 127 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYF 206 (474)
Q Consensus 127 rDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~el 206 (474)
|||||+|||++ .++.+||+|||+++.+..... +.......++..|+|||++.+..++.++|||||||++|||
T Consensus 162 ~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 233 (304)
T cd05096 162 RDLATRNCLVG---ENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI 233 (304)
T ss_pred cCcchhheEEc---CCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 99999999994 678999999999986543321 1112334568899999999988999999999999999999
Q ss_pred Hh--CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 207 LR--GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 207 lt--G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
++ +..||.+............................+|..+.+|+.+||..||++||++.+|.+.|+
T Consensus 234 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 234 LMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 86 678888754332222221111111111111123467899999999999999999999999988875
No 39
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2e-41 Score=353.72 Aligned_cols=254 Identities=20% Similarity=0.267 Sum_probs=197.2
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeE-------eCCE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV-------EGDY 77 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~-------~~~~ 77 (474)
..++|+++++||+|+||.||+|.+..+++.||||++... .....+|+.+++.++|++++..+..+.. ...+
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~--~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD--PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC--cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 356899999999999999999999999999999987543 2345689999999998777776554432 1235
Q ss_pred EEEEEecCCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 78 NVLVIDLLGPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
.++||||++++|.+++.. ....+++..++.++.||+.||.|||++|||||||||+||||+ ...+.+||+|||+|+
T Consensus 142 l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~--~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID--PNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc--CCCCceeeeccccch
Confidence 779999999999888753 345699999999999999999999999999999999999995 234579999999998
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc-
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK- 232 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~- 232 (474)
.+..... .....||+.|+|||++.+. .++.++|||||||+||||++|.+||.+.........+..+....
T Consensus 220 ~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 220 NLLAGQR--------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPT 291 (440)
T ss_pred hccCCCC--------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 7643221 1245789999999998765 58999999999999999999999998754322222221111000
Q ss_pred --------------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 --------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 --------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.......++...|+++.+||.+||..||.+||++.+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 00011122345788999999999999999999988764
No 40
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=333.05 Aligned_cols=262 Identities=19% Similarity=0.243 Sum_probs=211.0
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEec----cCCCchHHHHHHHHHHHhcCCCCCceeEEEeE----eCC
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLEN----VKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV----EGD 76 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~----~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~----~~~ 76 (474)
+..+|..++.||.|+||.|+.+.++.+|+.||||.+. .....+...+|+++|+.++|.|+|..+..+.. .-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4567888899999999999999999999999999765 22344568899999999998888877777655 345
Q ss_pred EEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 77 YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 77 ~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
..|+|+|+|+.+|.++++ .+..++...+..++.||+.||.|+|+.+|+||||||.|+|+ +.+..+||||||+|+..
T Consensus 100 DvYiV~elMetDL~~iik-~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 100 DVYLVFELMETDLHQIIK-SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDFGLARYL 175 (359)
T ss_pred eeEEehhHHhhHHHHHHH-cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEeccccceeec
Confidence 679999999999999998 34459999999999999999999999999999999999999 57888999999999987
Q ss_pred ccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH-------
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI------- 228 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i------- 228 (474)
...... ...+.++-|..|.|||++.. ..|+...||||+||||.||++|+..|.|.+.-...+.+..+
T Consensus 176 ~~~~~~-----~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 176 DKFFED-----GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred cccCcc-----cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 643111 12356788999999998775 56999999999999999999999999885433222222111
Q ss_pred -----h-----------hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011945 229 -----S-----------EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 229 -----~-----------~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 278 (474)
. ......+...+..+.++...+|+++||.+||.+|+|+++. |.+.+-
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eA---L~hPYl 313 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEA---LAHPYL 313 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHH---hcChhh
Confidence 1 1222334455566788999999999999999999997765 555543
No 41
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5e-43 Score=355.06 Aligned_cols=257 Identities=22% Similarity=0.332 Sum_probs=207.4
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
.+.+.+...||+|.||+||+|+|. | .||||+++.+.-. +.|.+|+.+|++-+|.|++.. .+++....+ .||
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLF-MG~~~~p~~-AIi 465 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLF-MGACMNPPL-AII 465 (678)
T ss_pred HHHhhccceeccccccceeecccc--c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheee-ehhhcCCce-eee
Confidence 456778999999999999999974 3 5999999876543 348999999999986655544 445555555 778
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
.-+| |.+|+.++.-...+|...+.+.|+.||++||.|||.++|||||||..||++ .++++|||+||||+..-.--.
T Consensus 466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~w~ 542 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKTRWS 542 (678)
T ss_pred ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeeeeec
Confidence 8888 889999998777889999999999999999999999999999999999999 466999999999996533221
Q ss_pred CccccccccCCCCccCccccccccccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~---~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
..+. .....|...|||||++..+ +|++.+||||||||+|||++|.+||... ...+.+..+.........
T Consensus 543 g~~q-----~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~---~~dqIifmVGrG~l~pd~ 614 (678)
T KOG0193|consen 543 GEQQ-----LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ---NRDQIIFMVGRGYLMPDL 614 (678)
T ss_pred cccc-----cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC---ChhheEEEecccccCccc
Confidence 1111 1334788999999999854 5899999999999999999999999843 233444444444444555
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 278 (474)
......+|.++++|+..||.+++++||.+.+|+..|+.++.
T Consensus 615 s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 615 SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 56667899999999999999999999999999998888764
No 42
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.5e-41 Score=332.77 Aligned_cols=254 Identities=19% Similarity=0.247 Sum_probs=196.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcC-CCeEEEEEEeccCCC----chHHHHHHHHHHHhc---CCCCCceeEEEe----Ee
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKTK----HPQLQYEAKLYKILQ---GGTGIPNLRWFG----VE 74 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~---~~~~i~~l~~~~----~~ 74 (474)
++|++.+.||+|+||.||+|++.. +++.||||++..... ...+.+|+.+++.+. |++++..+..+. ..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999854 468899998764322 235677888888774 444444444332 23
Q ss_pred CCEEEEEEecCCCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
....+++||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~---~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc---CCCCEEEccccce
Confidence 4568999999999999998743 34589999999999999999999999999999999999994 6789999999999
Q ss_pred cccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh---
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE--- 230 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~--- 230 (474)
+...... ......||..|+|||++.+..++.++|||||||++|||++|..||.+....+....+.....
T Consensus 158 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~ 229 (290)
T cd07862 158 RIYSFQM--------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 229 (290)
T ss_pred EeccCCc--------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 8654321 12345789999999999998999999999999999999999999987543222222211110
Q ss_pred ----------------ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 231 ----------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 231 ----------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.......+.+...+++.+.+++.+||+.||++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 01111233344567889999999999999999999888753
No 43
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.1e-41 Score=332.96 Aligned_cols=261 Identities=25% Similarity=0.458 Sum_probs=191.1
Q ss_pred CCccCCcEEEeeeeeecCceEEEEEEEcCC---CeEEEEEEeccCCCchHH----------HHHHH---HHHHhcCCCCC
Q 011945 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTKHPQL----------QYEAK---LYKILQGGTGI 65 (474)
Q Consensus 2 ~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAvK~~~~~~~~~~l----------~~E~~---il~~l~~~~~i 65 (474)
....+++|++.++||+|+||.||+|.+..+ +..+|+|+.......... ..++. .+..+.| .++
T Consensus 7 ~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h-~~i 85 (294)
T PHA02882 7 IDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDH-LGI 85 (294)
T ss_pred eccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCC-CCC
Confidence 345678999999999999999999998777 677888875433221100 11122 2223343 344
Q ss_pred ceeEEEeEeC----CEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC
Q 011945 66 PNLRWFGVEG----DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 66 ~~l~~~~~~~----~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~ 141 (474)
+.+..++... .+.+++++++..++.+++... ..+++..++.|+.||+.||.|||+++|+||||||+|||++ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~ 161 (294)
T PHA02882 86 PKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---G 161 (294)
T ss_pred CcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---C
Confidence 4444443322 255788898888998888743 3468889999999999999999999999999999999994 6
Q ss_pred CCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH
Q 011945 142 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK 221 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~ 221 (474)
.+.++|+|||+|+.+..................||+.|+|||++.+..++.++|||||||+||||++|+.||.+......
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 78899999999987754322111111122345799999999999999999999999999999999999999987643222
Q ss_pred HHH------HHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 222 KQK------YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 222 ~~~------~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
... +..+...+ .....+|+++.+++..||..+|++||++++|++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 242 LIHAAKCDFIKRLHEGK------IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHhHHHHHHHhhhhh------hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111 11111111 12356789999999999999999999999999876
No 44
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.5e-41 Score=340.60 Aligned_cols=252 Identities=19% Similarity=0.276 Sum_probs=199.6
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|.+..+++.||||++.... ....+..|+.+++.+.|++ |..+..++..+...|+||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~-i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPF-LTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCC-CCCEEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999876432 1234678999999998655 455555666778899999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~----- 150 (323)
T cd05571 80 GELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCC-----
Confidence 899888874 4579999999999999999999999999999999999999 4778999999999975432211
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+..... .+...+++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~---~~~~~~~~~~~~~-----~~p~~~~~ 220 (323)
T cd05571 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEKLFELILMEEI-----RFPRTLSP 220 (323)
T ss_pred --cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC---HHHHHHHHHcCCC-----CCCCCCCH
Confidence 1234579999999999999999999999999999999999999997633 2333333332222 23456889
Q ss_pred HHHHHHHHHhcCCCCCCC-----CHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 247 EFASYFHYCRSLRFDDKP-----DYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RP-----t~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
++.++|..||..||++|| ++.+|+ ++ .+....+|....
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll---~h-------~~f~~~~~~~~~ 263 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIM---EH-------RFFASINWQDVV 263 (323)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHH---cC-------CCcCCCCHHHHH
Confidence 999999999999999999 655553 32 334445676543
No 45
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.6e-41 Score=340.32 Aligned_cols=263 Identities=20% Similarity=0.260 Sum_probs=210.6
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+|.+++.||+|+||.||+|.+..+++.||||++.... ....+..|..++..+.+++++..+..+....+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5899999999999999999999999999999876432 12246678888888888899998888888889999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 81 EYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred cCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCC
Confidence 999 8899988864 4579999999999999999999999999999999999999 4778999999999975432221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ...+..+...... ++
T Consensus 157 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~~~~i~~~~~~-----~p 221 (323)
T cd05616 157 -------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQSIMEHNVA-----YP 221 (323)
T ss_pred -------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCC-----CC
Confidence 12345799999999999999999999999999999999999999987433 3444444433321 23
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHH--HHHHHHHHHHHcCCCCCCcccccccccc
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAY--LKRLFRDLFIREGFQFDYVFDWTILKYQ 296 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~--l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 296 (474)
..++.++.+++..||..||++|++... ..++++ ..+....+|......
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~-------h~~~~~~~~~~~~~~ 271 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE-------HAFFRYIDWEKLERK 271 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc-------CCCcCCCCHHHHHhC
Confidence 567899999999999999999998521 112222 233445678765543
No 46
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.1e-41 Score=339.33 Aligned_cols=253 Identities=18% Similarity=0.252 Sum_probs=200.3
Q ss_pred cEEEeeeeeecCceEEEEEEEc---CCCeEEEEEEeccCC------CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~------~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
+|+++++||+|+||.||++++. .+++.||+|++.... ....+..|+.+++.+.++++|..+..+.......
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999864 478999999875321 2235778999999998888888888888888899
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+++|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.+.
T Consensus 81 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCEEEeeCcCCcccc
Confidence 9999999 8899998863 45799999999999999999999999999999999999994 67899999999998654
Q ss_pred cCCCccccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH-HHHHHHHhhccccc
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVST 235 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~ 235 (474)
...... .....||..|+|||++.+.. ++.++|||||||+||||++|..||........ ......+....
T Consensus 157 ~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~--- 227 (332)
T cd05614 157 SEEKER------TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD--- 227 (332)
T ss_pred ccCCCc------cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC---
Confidence 332211 12457999999999998754 78999999999999999999999975433222 22222222211
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHH--HHHHHHHH
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYA--YLKRLFRD 275 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~--~l~~~L~~ 275 (474)
..+...+++.+.+++..||..||++||++. .+.+++++
T Consensus 228 --~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 228 --PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred --CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 122346789999999999999999999543 33344444
No 47
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2e-41 Score=356.62 Aligned_cols=254 Identities=18% Similarity=0.245 Sum_probs=192.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-CCchHHHHHHHHHHHhcCCCC-----Cce-eEEEeEeCCEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLQYEAKLYKILQGGTG-----IPN-LRWFGVEGDYN 78 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~l~~E~~il~~l~~~~~-----i~~-l~~~~~~~~~~ 78 (474)
.++|+++++||+|+||+||+|.+..+++.||||+++.. .....+..|+.+++.+.+.+. +.. +.++.......
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 47899999999999999999999999999999998643 223456778899888875432 333 34444556788
Q ss_pred EEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCC-------------CCCe
Q 011945 79 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGR-------------RANQ 144 (474)
Q Consensus 79 ~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~-------------~~~~ 144 (474)
||||+++|++|.+++.. .+.+++..++.|+.||+.||.|||+ .|||||||||+|||++.++ +...
T Consensus 208 ~iv~~~~g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~ 286 (467)
T PTZ00284 208 CIVMPKYGPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCR 286 (467)
T ss_pred EEEEeccCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCce
Confidence 99999999999998874 4579999999999999999999998 5999999999999996322 1225
Q ss_pred EEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHH
Q 011945 145 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK 224 (474)
Q Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 224 (474)
+||+|||++...... ....+||..|+|||++.+..++.++|||||||+||||++|+.||.+.........
T Consensus 287 vkl~DfG~~~~~~~~----------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 287 VRICDLGGCCDERHS----------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred EEECCCCccccCccc----------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 999999988643221 2346899999999999999999999999999999999999999987543322222
Q ss_pred HHHHhhcccc---------------------------chHHHHhc-------CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 225 YEKISEKKVS---------------------------TSIEALCR-------GYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 225 ~~~i~~~~~~---------------------------~~~~~l~~-------~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
+.++...... ..+..+.. ...+.+.+||..||.+||++||++++++
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L 436 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT 436 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence 2221110000 00000000 0135678999999999999999988774
No 48
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-42 Score=348.02 Aligned_cols=250 Identities=21% Similarity=0.256 Sum_probs=218.9
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
.++|.++++||+|+||.+++++++..+..|++|.+..... ......|+.+++++.|+++|.+...|..++.+.+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 4689999999999999999999999999999998876542 235789999999999888888888888888889999
Q ss_pred EecC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 82 IDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|+|| ||+|.+.++..+ ..|+++.++.|+.||+.||.|||+++|+|||||+.||+++ +++.|||.|||+|+.+...
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecchhhhhhcCCc
Confidence 9999 999999998655 5699999999999999999999999999999999999995 7778899999999988776
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.. ...+++||+.||+||++.+.+|+.|+|||||||++|||++-+.+|... +....+.+|..... ..
T Consensus 160 ~~-------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~---~m~~Li~ki~~~~~----~P 225 (426)
T KOG0589|consen 160 DS-------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS---NMSELILKINRGLY----SP 225 (426)
T ss_pred hh-------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc---chHHHHHHHhhccC----CC
Confidence 42 235689999999999999999999999999999999999999999874 44555556555442 33
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRL 272 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~ 272 (474)
+...++.+++.+|..||..+|+.||++.+|+..
T Consensus 226 lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 226 LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 557789999999999999999999999888654
No 49
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.8e-41 Score=345.65 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=202.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCC-----CeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
++|++.+.||+|+||.||+|.+... ++.||||++..... ...+.+|+.+++.+..|++|..+..++......
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 4699999999999999999986544 35799998865432 235788999999995566666666677777889
Q ss_pred EEEEecC-CCCHHHHHHHcC------------------------------------------------------------
Q 011945 79 VLVIDLL-GPSLEDLFNFCS------------------------------------------------------------ 97 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~------------------------------------------------------------ 97 (474)
+++|||+ +++|.+++....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 9999999 889999885321
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccc
Q 011945 98 ---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 168 (474)
Q Consensus 98 ---------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (474)
..+++..++.|+.||+.||.|||++||+||||||+|||++ +++.+||+|||+++.+...... .
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~-----~ 269 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNY-----V 269 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcce-----e
Confidence 2478889999999999999999999999999999999995 6788999999999865443211 1
Q ss_pred cCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHH
Q 011945 169 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 247 (474)
Q Consensus 169 ~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 247 (474)
......++..|||||++.+..++.++|||||||++|||++ |+.||....... .+.......... .....+|++
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~ 343 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS---KFYKMVKRGYQM---SRPDFAPPE 343 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH---HHHHHHHcccCc---cCCCCCCHH
Confidence 1123345678999999999899999999999999999997 999998754322 122221111111 122346899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 248 FASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 248 l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
+.+++..||+.||++||++.+|.++|++++
T Consensus 344 l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 344 IYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999999999999875
No 50
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.5e-41 Score=337.27 Aligned_cols=264 Identities=20% Similarity=0.253 Sum_probs=211.4
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+|.+.+.||+|+||.||+|.+..+++.||||++.... ....+..|..++..+.+++++..+..+....+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4789999999999999999999999999999876431 22346788899999988999988888888888999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 81 EYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCc
Confidence 999 8899998874 4579999999999999999999999999999999999999 4778999999999975432221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......||..|+|||++.+..++.++|||||||++|||++|..||.+... ...+..+...... +.
T Consensus 157 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~i~~~~~~-----~p 221 (323)
T cd05615 157 -------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DELFQSIMEHNVS-----YP 221 (323)
T ss_pred -------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCC-----CC
Confidence 12345799999999999999999999999999999999999999987532 3344444433321 23
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccc
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 295 (474)
..++.++.+++..||..+|.+|++..+. ..+++. ..++...++|.....
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~~~~~--~~~~i~---~h~~f~~~~~~~~~~ 270 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLGCGPE--GERDIR---EHAFFRRIDWDKLEN 270 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCCCCCC--CHHHHh---cCcccCCCCHHHHhc
Confidence 5678999999999999999999985321 112221 234455678876543
No 51
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9e-42 Score=332.80 Aligned_cols=269 Identities=22% Similarity=0.333 Sum_probs=219.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
+.|++++.||.|.-|+||+|+...++..+|+|++.... ...+.+.|.+||..+. |+.++.++..++..++.|++
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-HPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-CCccchhhheeeccceeEEE
Confidence 46889999999999999999999999999999987643 2235778999999988 77888998899999999999
Q ss_pred EecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 82 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|||| ||+|..+.+.. ++.|++..+..++.+|+.||+|||-.|||+|||||+|||| .++|+|.|+||.|+....-.
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCCC
Confidence 9999 99999998754 4569999999999999999999999999999999999999 58999999999998654210
Q ss_pred CCcc------------------------------c------------------cc-cccCCCCccCccccccccccCCCC
Q 011945 160 ATHQ------------------------------H------------------IP-YRENKNLTGTARYASMNTHLGIEQ 190 (474)
Q Consensus 160 ~~~~------------------------------~------------------~~-~~~~~~~~GT~~Y~APE~~~~~~~ 190 (474)
.+.. . .| -.....++||..|+|||++.|...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0000 0 00 012456789999999999999999
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCC----H
Q 011945 191 SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD----Y 266 (474)
Q Consensus 191 s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt----~ 266 (474)
+.++|+|+|||+|||||.|..||.+.+. .+.+..|.......+-. ..++..+++||+.+|.+||.+|.. +
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~---~~Tl~NIv~~~l~Fp~~---~~vs~~akDLIr~LLvKdP~kRlg~~rGA 386 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNN---KETLRNIVGQPLKFPEE---PEVSSAAKDLIRKLLVKDPSKRLGSKRGA 386 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCc---hhhHHHHhcCCCcCCCC---CcchhHHHHHHHHHhccChhhhhccccch
Confidence 9999999999999999999999998543 45555555544332211 245689999999999999999987 5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccccccccc
Q 011945 267 AYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (474)
Q Consensus 267 ~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 295 (474)
.+|++ ..+...++|...+.
T Consensus 387 ~eIK~----------HpFF~gVnWaLir~ 405 (459)
T KOG0610|consen 387 AEIKR----------HPFFEGVNWALIRC 405 (459)
T ss_pred HHhhc----------CccccCCChhheec
Confidence 55533 46777889996654
No 52
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-40 Score=334.39 Aligned_cols=232 Identities=20% Similarity=0.289 Sum_probs=188.4
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||++.+..+|+.||+|++.... ....+..|+.+++.+.|++ |..+..++......|+||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~-i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF-LTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCC-CcceeeEEecCCEEEEEEeCCCC
Confidence 47999999999999999999999999876431 2234678999999998655 445555566777899999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~----- 150 (323)
T cd05595 80 GELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCC-----
Confidence 899888863 4579999999999999999999999999999999999999 4778999999999875432211
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+..... .+...+++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---~~~~~~~~~~~~-----~~p~~~~~ 220 (323)
T cd05595 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEI-----RFPRTLSP 220 (323)
T ss_pred --ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCC-----CCCCCCCH
Confidence 11345799999999999999999999999999999999999999976432 333333332222 13356889
Q ss_pred HHHHHHHHHhcCCCCCCC
Q 011945 247 EFASYFHYCRSLRFDDKP 264 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RP 264 (474)
++.++|..||..||++|+
T Consensus 221 ~~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 221 EAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred HHHHHHHHHccCCHHHhC
Confidence 999999999999999998
No 53
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=7.3e-41 Score=334.72 Aligned_cols=236 Identities=21% Similarity=0.271 Sum_probs=193.0
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|.+..+++.||||++.... ....+..|..++..+.+|++|..+..+...+...++||||+ |
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999999999999999876431 22345667777777666777777777777888999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~----- 151 (316)
T cd05592 81 GDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEG----- 151 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCC-----
Confidence 899998874 4579999999999999999999999999999999999999 4778999999999976433221
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+... .+.+..+.... ..+...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---~~~~~~i~~~~-----~~~~~~~~~ 221 (316)
T cd05592 152 --KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---DELFDSILNDR-----PHFPRWISK 221 (316)
T ss_pred --ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCC-----CCCCCCCCH
Confidence 12345799999999999999999999999999999999999999987543 33333333221 122355789
Q ss_pred HHHHHHHHHhcCCCCCCCCHH
Q 011945 247 EFASYFHYCRSLRFDDKPDYA 267 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~ 267 (474)
++.++|..||..||++||++.
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred HHHHHHHHHccCCHHHcCCCh
Confidence 999999999999999999864
No 54
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.4e-40 Score=333.59 Aligned_cols=239 Identities=21% Similarity=0.267 Sum_probs=192.9
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhc--CCCCCceeEEEeEeCCEEEEE
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~--~~~~i~~l~~~~~~~~~~~lv 81 (474)
|++++.||+|+||.||+|.+..+++.||||++.... ....+..|++++..+. .|++|..+..+.......|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 789999999999999999999999999999886431 2245677777766543 255666666667788899999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|..++. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCC
Confidence 9999 788888775 4579999999999999999999999999999999999999 477899999999987543221
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+... .+.+..+...... +
T Consensus 156 ~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---~~~~~~i~~~~~~-----~ 220 (324)
T cd05589 156 D-------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---EEVFDSIVNDEVR-----Y 220 (324)
T ss_pred C-------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCC-----C
Confidence 1 12346799999999999999999999999999999999999999986432 3333333332221 2
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYA 267 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~ 267 (474)
...+++++.++|.+||..||++||+..
T Consensus 221 p~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 221 PRFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 356789999999999999999999543
No 55
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-42 Score=338.85 Aligned_cols=254 Identities=20% Similarity=0.274 Sum_probs=200.3
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----------------chHHHHHHHHHHHhcCCCCCce
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------------HPQLQYEAKLYKILQGGTGIPN 67 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------------~~~l~~E~~il~~l~~~~~i~~ 67 (474)
...++|++++.||+|.||.|-+|++..+++.||||++..... .+...+|+.||++|.|.++|..
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 456899999999999999999999999999999998765321 1357899999999998555555
Q ss_pred eEEEe-EeCCEEEEEEecC-CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCe
Q 011945 68 LRWFG-VEGDYNVLVIDLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 144 (474)
Q Consensus 68 l~~~~-~~~~~~~lv~e~~-g~sL~~li~~~~~~-l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~ 144 (474)
+.... ...+..|||+||| .|.+... . +... +++.+++.|+.+++.||+|||.+|||||||||+|+||+ .+++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~-p-~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~---~~g~ 248 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC-P-PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS---SDGT 248 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC-C-CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc---CCCc
Confidence 54443 3567899999999 4433222 1 2344 99999999999999999999999999999999999995 7799
Q ss_pred EEEEecCCccccccCCCccccccccCCCCccCccccccccccCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCcCc
Q 011945 145 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGT 220 (474)
Q Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~----~s~ksDIwSlGvil~elltG~~Pf~~~~~~~ 220 (474)
|||+|||.+..+........ .......+||+.|+|||...++. .+.+.||||+||+||.|+.|++||.+ ..
T Consensus 249 VKIsDFGVs~~~~~~~~~~~--d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~---~~ 323 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGS--DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD---DF 323 (576)
T ss_pred EEeeccceeeecccCCcccc--HHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc---ch
Confidence 99999999987633211100 01123368999999999988743 36889999999999999999999977 45
Q ss_pred HHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 221 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
..+.+.+|....+..+.. ..+.+.+++||.+||.+||+.|.+..+|+
T Consensus 324 ~~~l~~KIvn~pL~fP~~---pe~~e~~kDli~~lL~KdP~~Ri~l~~ik 370 (576)
T KOG0585|consen 324 ELELFDKIVNDPLEFPEN---PEINEDLKDLIKRLLEKDPEQRITLPDIK 370 (576)
T ss_pred HHHHHHHHhcCcccCCCc---ccccHHHHHHHHHHhhcChhheeehhhhe
Confidence 567777777665543322 24568999999999999999999976664
No 56
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.4e-41 Score=344.32 Aligned_cols=250 Identities=16% Similarity=0.185 Sum_probs=194.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
.++|+++++||+|+||.||+|.+..+++.||||... ...+.+|+++++.|+|++++. +..++..+...+++||++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~HpnIv~-~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAINHPSIIQ-LKGTFTYNKFTCLILPRY 165 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCCCCCCCC-EeEEEEECCeeEEEEecC
Confidence 367999999999999999999999999999999753 345789999999999765555 445556778889999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
+++|.+++.. ...+++..++.|+.||+.||.|||++|||||||||+|||++ ..+.+||+|||+|+........
T Consensus 166 ~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~~~~~~~~--- 238 (391)
T PHA03212 166 KTDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAACFPVDINAN--- 238 (391)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEEEeCCccccccccccc---
Confidence 9999988864 45789999999999999999999999999999999999994 7788999999999754332211
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC----cHHHHHHHHhhcc---------
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG----TKKQKYEKISEKK--------- 232 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~----~~~~~~~~i~~~~--------- 232 (474)
......||+.|+|||++.+..++.++|||||||+||||++|..||...... .....+..+....
T Consensus 239 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 239 ---KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred ---ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 123458999999999999999999999999999999999999887542210 0011111111000
Q ss_pred -----------------c----cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 -----------------V----STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 -----------------~----~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
. ..........+|.++.+||.+||++||++||++.+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL 374 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL 374 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHh
Confidence 0 0000001124577899999999999999999988774
No 57
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.2e-41 Score=326.93 Aligned_cols=254 Identities=14% Similarity=0.222 Sum_probs=202.9
Q ss_pred CCcEEEeeeeeecCceEEEEEEEc---CCCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
.++|++.+.||+|+||.||+|.+. ..+..||+|.++..... ..+..|+.++..++|+ ++..+..+...+...+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~-~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHS-NIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCC-CcCeEEEEEecCCCcE
Confidence 457999999999999999999865 34678999987754322 3578899999999755 5555556666778899
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+||||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||+ +.++.++|+|||.+.....
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCcccccccc
Confidence 999999 778999987656679999999999999999999999999999999999999 4678999999998765432
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
.... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+.... ..+..+......
T Consensus 160 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---~~~~~~~~~~~~--- 227 (266)
T cd05064 160 EAIY------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---DVIKAVEDGFRL--- 227 (266)
T ss_pred cchh------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHHCCCCC---
Confidence 2110 1112345678999999999999999999999999999775 99999875432 223333322211
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
.....+|..+.+++..||+.+|++||++++|.+.|..+
T Consensus 228 -~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 -PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 12456899999999999999999999999999998765
No 58
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.7e-41 Score=338.46 Aligned_cols=243 Identities=20% Similarity=0.287 Sum_probs=197.9
Q ss_pred eeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
||+|+||.||+|.+..+++.||||++... .....+..|+.+++.++|++++. +..+.......++||||+ +++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVP-LKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEec-eeeEEecCCeEEEEEcCCCCCc
Confidence 79999999999999999999999987542 12235778999999998665555 445556778899999999 889
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccc
Q 011945 89 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 168 (474)
Q Consensus 89 L~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (474)
|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~------- 148 (312)
T cd05585 80 LFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDD------- 148 (312)
T ss_pred HHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCC-------
Confidence 9999874 4579999999999999999999999999999999999999 4778999999999975433221
Q ss_pred cCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHH
Q 011945 169 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 248 (474)
Q Consensus 169 ~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 248 (474)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+..... .+...+++++
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~ 220 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN---VNEMYRKILQEPL-----RFPDGFDRDA 220 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC---HHHHHHHHHcCCC-----CCCCcCCHHH
Confidence 1234579999999999999999999999999999999999999998643 3344444433222 2335688999
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 249 ASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 249 ~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
.++|..||..||++||++..+.++|.+.+
T Consensus 221 ~~li~~~L~~dp~~R~~~~~~~e~l~hp~ 249 (312)
T cd05585 221 KDLLIGLLSRDPTRRLGYNGAQEIKNHPF 249 (312)
T ss_pred HHHHHHHcCCCHHHcCCCCCHHHHHcCCC
Confidence 99999999999999998766777776654
No 59
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.4e-41 Score=340.38 Aligned_cols=253 Identities=21% Similarity=0.241 Sum_probs=195.9
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeC----
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEG---- 75 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~---- 75 (474)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|++++..+..+....
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 35689999999999999999999999999999999875432 2345778999999999877777666554322
Q ss_pred -CEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 76 -DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 76 -~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
...|++|||++++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 171 (359)
T ss_pred cceeEEEEeCCCcCHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEecCCCcc
Confidence 3579999999988888775 358999999999999999999999999999999999999 478899999999997
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc---
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--- 231 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~--- 231 (474)
....... .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+.........+......
T Consensus 172 ~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 243 (359)
T cd07876 172 TACTNFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243 (359)
T ss_pred ccccCcc--------CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcH
Confidence 5433211 13357899999999999999999999999999999999999999875432111111100000
Q ss_pred ----------------cc---cchHHHH------------hcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 232 ----------------KV---STSIEAL------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 232 ----------------~~---~~~~~~l------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.. ......+ ....++++.+||.+||..||++||++.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 313 (359)
T cd07876 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEAL 313 (359)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHh
Confidence 00 0000000 112357889999999999999999987774
No 60
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.8e-40 Score=330.34 Aligned_cols=254 Identities=19% Similarity=0.248 Sum_probs=200.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.++|.+.++||+|+||.||+|++..+++.||||.+.... ....+.+|+.+++.++|++++ .+..+...+...+++|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcc-eEEEEEeeCCeEEEEE
Confidence 367999999999999999999999999999999876432 233577899999999865555 4555566777899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||+.++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 84 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~- 159 (309)
T cd07872 84 EYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTK- 159 (309)
T ss_pred eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCCCcc-
Confidence 999989999987666678999999999999999999999999999999999999 4778999999999976433221
Q ss_pred cccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc-------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS------- 234 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------- 234 (474)
......+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.........
T Consensus 160 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 160 ------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred ------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 1123467899999999876 45899999999999999999999999875543332222221111000
Q ss_pred ---------------chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 235 ---------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 235 ---------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.........+++++.++|.+||..||.+||++.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 284 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAM 284 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHh
Confidence 001112235688999999999999999999987774
No 61
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1e-40 Score=340.01 Aligned_cols=269 Identities=19% Similarity=0.284 Sum_probs=203.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|+++++||+|+||+||+|.+..+++.||||++.... ....+..|+.++..++|++ |..+.....+....++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~-iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW-VVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCC-cceEEEEEecCCeEEEE
Confidence 57999999999999999999999999999999986421 2235778999999998654 55555556677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ |++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||||+ .++.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 80 MEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred EcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCCEEEeeccCcccccccc
Confidence 9999 8899999874 45799999999999999999999999999999999999994 67899999999998654321
Q ss_pred Ccc-------ccc---------------------cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 011945 161 THQ-------HIP---------------------YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212 (474)
Q Consensus 161 ~~~-------~~~---------------------~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~P 212 (474)
... ..+ .......+||+.|+|||++.+..++.++|||||||+||||++|..|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 100 000 0011245899999999999999999999999999999999999999
Q ss_pred CCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCC---CCCCHHHHHHHHHHHHHHcCCCCCCccc
Q 011945 213 WQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFD---DKPDYAYLKRLFRDLFIREGFQFDYVFD 289 (474)
Q Consensus 213 f~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~---~RPt~~~l~~~L~~l~~~~~~~~~~~~d 289 (474)
|.+.. ....+.++.........+. ...+++++.++|.+++. +|+ .||++++|+ + .++....+
T Consensus 236 f~~~~---~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~---~-------hp~f~~~~ 300 (363)
T cd05628 236 FCSET---PQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIK---T-------NPFFEGVD 300 (363)
T ss_pred CCCCC---HHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh---C-------CCCCCCCC
Confidence 98643 3344444443221111111 12367899999998664 444 457866663 2 24555678
Q ss_pred cccccc
Q 011945 290 WTILKY 295 (474)
Q Consensus 290 w~~~~~ 295 (474)
|.....
T Consensus 301 ~~~~~~ 306 (363)
T cd05628 301 WEHIRE 306 (363)
T ss_pred HHHHHh
Confidence 887543
No 62
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=6.2e-41 Score=335.77 Aligned_cols=260 Identities=20% Similarity=0.238 Sum_probs=203.3
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
++||+|+||.||+|++..+++.||||++.... ....+..|.+++..+.+|++|..+..+.......|+||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999876431 22346778889888877888888888888888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~----- 151 (321)
T cd05591 81 GDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGV----- 151 (321)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCc-----
Confidence 899888864 4579999999999999999999999999999999999999 4778999999999975433221
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
......||..|+|||++.+..++.++|||||||++|||++|+.||.... ....+..+...... ....++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~---~~~~~~~i~~~~~~-----~p~~~~~ 221 (321)
T cd05591 152 --TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN---EDDLFESILHDDVL-----YPVWLSK 221 (321)
T ss_pred --cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC---HHHHHHHHHcCCCC-----CCCCCCH
Confidence 1234579999999999999999999999999999999999999998743 33444444433221 2235689
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 247 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
++.++|..||..||++||+........++++ ..++...++|....
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~---~hp~~~~~~~~~~~ 266 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIK---QHPFFKEIDWVLLE 266 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHh---cCCccCCCCHHHHH
Confidence 9999999999999999994322111112221 12334556787653
No 63
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6.6e-41 Score=335.61 Aligned_cols=260 Identities=18% Similarity=0.242 Sum_probs=204.4
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|++..+++.||||++... .....+..|..++..+.+|++|..+..+.......|+||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999999999999999987642 122346778888888877788888877788888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~-~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~----- 151 (320)
T cd05590 81 GDLMFHIQK-SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGK----- 151 (320)
T ss_pred chHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCC-----
Confidence 899988874 4579999999999999999999999999999999999999 4778999999999875432211
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. ....+..+..... .+...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~---~~~~~~~i~~~~~-----~~~~~~~~ 221 (320)
T cd05590 152 --TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN---EDDLFEAILNDEV-----VYPTWLSQ 221 (320)
T ss_pred --cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC---HHHHHHHHhcCCC-----CCCCCCCH
Confidence 1234579999999999999999999999999999999999999998743 3334444433222 12345789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccc
Q 011945 247 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 295 (474)
++.++|..||..||++||++.++. -.++++ ..++...++|.....
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~-~~~~~~---~h~~f~~~~~~~~~~ 266 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSLTLG-GEEAIL---RHPFFKELDWEKLNR 266 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCC-CHHHHH---cCCCcCCCCHHHHHh
Confidence 999999999999999999974431 112221 234444567776543
No 64
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1e-40 Score=333.66 Aligned_cols=236 Identities=20% Similarity=0.261 Sum_probs=192.5
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
++||+|+||.||+|++..+++.||||+++.. .....+..|..++..+.+++++..+..+.......|+||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4799999999999999999999999987643 223446778888887766777777777777888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~----- 151 (316)
T cd05620 81 GDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDN----- 151 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCC-----
Confidence 899988874 4579999999999999999999999999999999999999 4778999999999874322111
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
......||..|+|||++.+..++.++|||||||++|||++|..||.+... .+.+..+.... ..+...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~---~~~~~~~~~~~-----~~~~~~~~~ 221 (316)
T cd05620 152 --RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---DELFESIRVDT-----PHYPRWITK 221 (316)
T ss_pred --ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCC-----CCCCCCCCH
Confidence 12346799999999999999999999999999999999999999976432 33333332221 122345788
Q ss_pred HHHHHHHHHhcCCCCCCCCHH
Q 011945 247 EFASYFHYCRSLRFDDKPDYA 267 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~ 267 (474)
++.++|..||..||++||++.
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~ 242 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVV 242 (316)
T ss_pred HHHHHHHHHccCCHHHcCCCh
Confidence 999999999999999999963
No 65
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=9.4e-41 Score=337.44 Aligned_cols=257 Identities=22% Similarity=0.305 Sum_probs=205.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCC-eEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~-~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
.++|++.++||+|+||.||+|.+..++ ..||||++... .....+..|+.+++.+.|++++ .+..+.......+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv-~~~~~~~~~~~~~ 107 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCV-NLYGSFKDESYLY 107 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCc-ceEEEEEeCCEEE
Confidence 467999999999999999999876654 68999987532 2234578899999999865555 5555567778899
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
++|||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 108 lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCC
Confidence 999999 8899999974 4579999999999999999999999999999999999999 4788999999999986543
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
.. ....||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+.....
T Consensus 184 ~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~---~~~~~~~i~~~~~----- 245 (340)
T PTZ00426 184 RT----------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE---PLLIYQKILEGII----- 245 (340)
T ss_pred Cc----------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC---HHHHHHHHhcCCC-----
Confidence 21 24579999999999999889999999999999999999999998643 3334444443322
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCC-----CHHHHHHHHHHHHHHcCCCCCCccccccccc
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKP-----DYAYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RP-----t~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 295 (474)
.+...+++++.++|.+||+.||++|+ ++++++ + .++...++|.....
T Consensus 246 ~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~---~-------hp~f~~~~~~~~~~ 297 (340)
T PTZ00426 246 YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVK---E-------HPWFGNIDWVSLLH 297 (340)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHH---c-------CCCcCCCCHHHHHh
Confidence 12356788999999999999999996 555442 2 23444567876443
No 66
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-40 Score=335.67 Aligned_cols=271 Identities=18% Similarity=0.273 Sum_probs=206.8
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
..++|++.++||.|+||.||++.+..++..||+|++..... ...+.+|+++++.++|++++. +..++..+...+++
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv 81 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG-FYGAFYSDGEISIC 81 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccc-eeEEEEECCEEEEE
Confidence 45789999999999999999999999999999998765432 245889999999998655554 55555667889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~-gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|||+ +++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||++..+...
T Consensus 82 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 82 MEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCEEEeeCCcchhhhhh
Confidence 9999 8899999974 45689999999999999999999985 799999999999994 6788999999999765432
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHH-------------
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE------------- 226 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~------------- 226 (474)
.. ....||..|+|||++.+..++.++|||||||++|||++|+.||...........+.
T Consensus 158 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (333)
T cd06650 158 MA---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETS 228 (333)
T ss_pred cc---------ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccC
Confidence 21 33578999999999999899999999999999999999999997543211111000
Q ss_pred ------------------------HHhhccccchHHHHh-cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 227 ------------------------KISEKKVSTSIEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 227 ------------------------~i~~~~~~~~~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
.+.........+.+. ..++.++.+||.+||.+||++||++.+| |.+.|.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~el---l~h~~~~~~ 305 (333)
T cd06650 229 PRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQL---MVHAFIKRS 305 (333)
T ss_pred cccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHH---hhCHHHhcC
Confidence 000000000000011 1357889999999999999999998877 444544443
Q ss_pred -CCCCCcccccc
Q 011945 282 -FQFDYVFDWTI 292 (474)
Q Consensus 282 -~~~~~~~dw~~ 292 (474)
....+.+.|..
T Consensus 306 ~~~~~~~~~~~~ 317 (333)
T cd06650 306 EAEEVDFAGWLC 317 (333)
T ss_pred ccccccHHHHHH
Confidence 34445667753
No 67
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.9e-42 Score=329.01 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=203.3
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeC----CEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG----DYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~----~~~~lv~e 83 (474)
.|.-.+++|.|+||.||.|....+++.||||..-.+.. --.+|+++|+.+.|+|+|..++.|.... -+..+|||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r--~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle 102 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR--YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE 102 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC--cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence 58889999999999999999999999999997544332 3367999999999888777776665422 25678999
Q ss_pred cCCCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 84 LLGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 84 ~~g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|+..+|.++++.. +.+++...+.-+..||++||.|||+.||+||||||.|+|++ .+.+.+||||||.|+.+....
T Consensus 103 ymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 103 YMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred hchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCcceeeccCC
Confidence 9999999999842 67799999999999999999999999999999999999997 567999999999999887654
Q ss_pred CccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH--
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI-- 237 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-- 237 (474)
. +..+..|..|.|||.+.|. +|+.+.||||.|||+.||+.|++-|.|....+....+.++....-...+
T Consensus 181 p--------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 181 P--------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred C--------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 3 3456889999999999985 4999999999999999999999999996554444333333221111000
Q ss_pred -------------------HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 238 -------------------EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 238 -------------------~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
..+....+++..+|+.++|.++|.+|.++.++.
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 113345689999999999999999999977663
No 68
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.5e-40 Score=325.14 Aligned_cols=252 Identities=19% Similarity=0.243 Sum_probs=195.6
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhc---CCCCCceeEEEeE----eCC
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQ---GGTGIPNLRWFGV----EGD 76 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~---~~~~i~~l~~~~~----~~~ 76 (474)
+|++.+.||+|+||+||+|.+..+++.||||.+..... ...+.+|+.+++.+. |++++..+..+.. ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 59999999999999999999999999999998765322 235678888888774 4444444433322 245
Q ss_pred EEEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 77 YNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 77 ~~~lv~e~~g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
..+++||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccCcccc
Confidence 679999999889999887543 3589999999999999999999999999999999999994 778999999999986
Q ss_pred cccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc----
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK---- 231 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~---- 231 (474)
+..... .....||..|+|||++.+..++.++|||||||++|||++|..||.+.........+......
T Consensus 158 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07863 158 YSCQMA--------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 229 (288)
T ss_pred ccCccc--------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChh
Confidence 643221 12357899999999999989999999999999999999999999765432222222211100
Q ss_pred ---------------cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 232 ---------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 232 ---------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
........+...++.++.+++.+||..||++||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 001112233456788999999999999999999988775
No 69
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1e-40 Score=352.91 Aligned_cols=253 Identities=22% Similarity=0.261 Sum_probs=202.8
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----hHHHHHHHHHHHhcCCCCCceeEEEeEeC----
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEG---- 75 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~l~~E~~il~~l~~~~~i~~l~~~~~~~---- 75 (474)
...++|++.++||+|+||+||+|.+..+++.||||++...... ..+..|+.++..+.|.+++.....+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3568999999999999999999999999999999998654322 34678888888888776665544433221
Q ss_pred ---CEEEEEEecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEE
Q 011945 76 ---DYNVLVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 148 (474)
Q Consensus 76 ---~~~~lv~e~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~ 148 (474)
...++||||+ +++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCCCEEEE
Confidence 2468999999 88999998642 34699999999999999999999999999999999999994 67899999
Q ss_pred ecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH
Q 011945 149 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (474)
|||+++.+....... ......||+.|+|||++.+..++.++|||||||+||||++|+.||.+.. ....+..+
T Consensus 186 DFGls~~~~~~~~~~-----~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~---~~~~~~~~ 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDD-----VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN---MEEVMHKT 257 (496)
T ss_pred ecccCeecccccccc-----ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHH
Confidence 999998765432111 1234689999999999999999999999999999999999999997643 23333333
Q ss_pred hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 229 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..... ..+...+++++.+++..||..||++||++.++++
T Consensus 258 ~~~~~----~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 258 LAGRY----DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred hcCCC----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 33222 2244678899999999999999999999998764
No 70
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.8e-41 Score=341.70 Aligned_cols=255 Identities=22% Similarity=0.304 Sum_probs=201.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|.+.++||+|+||+||+|.+..+++.||||++... .....+..|+.++..+.|.+ +..+..+..++...++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPW-IVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCC-ccchhhheecCCeEEEE
Confidence 5799999999999999999999999999999987643 22345788999999998554 44555556677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||| +.++.+||+|||++..+....
T Consensus 80 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 80 MEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred EcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCcccC
Confidence 9999 88999999754 679999999999999999999999999999999999999 477899999999998765433
Q ss_pred Ccc----------------------ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Q 011945 161 THQ----------------------HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 218 (474)
Q Consensus 161 ~~~----------------------~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~ 218 (474)
... ...........||+.|+|||++.+..++.++|||||||+||||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 000 0000112345799999999999999999999999999999999999999987542
Q ss_pred CcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCC-HHHHHH
Q 011945 219 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD-YAYLKR 271 (474)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt-~~~l~~ 271 (474)
...+..+.........+ ....+++++.++|..||. ||.+||+ ++++++
T Consensus 236 ---~~~~~~i~~~~~~~~~p-~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 236 ---QETYNKIINWKESLRFP-PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred ---HHHHHHHhccCCcccCC-CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 33333333311111111 112368999999999997 9999999 887743
No 71
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-42 Score=343.61 Aligned_cols=251 Identities=21% Similarity=0.303 Sum_probs=201.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
+..|+++++||+||.+.||++.. .+...||+|.+...... ..+..|+.+|.+|+++..|..++.|...+.+.|||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 55699999999999999999996 44456677754433222 34899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 82 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 82 ~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+-..+|..+++.....++.-.+..+..||+.++.++|.+||||.||||.|||+ -.|.+||+|||+|..+..+.+
T Consensus 439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl----VkG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL----VKGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE----EeeeEEeeeechhcccCcccc
Confidence 9999999999998666556655899999999999999999999999999999999 479999999999998877654
Q ss_pred ccccccccCCCCccCccccccccccCCC-----------CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIE-----------QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 230 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~-----------~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (474)
... ....+||+.||+||.+.... .++++||||||||||+|+.|+.||.... ....++..|..
T Consensus 515 sI~-----kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~aI~~ 587 (677)
T KOG0596|consen 515 SIV-----KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLHAITD 587 (677)
T ss_pred cee-----eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHHhhcC
Confidence 321 24569999999999987432 4689999999999999999999997643 22334444444
Q ss_pred ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 231 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 231 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.......+.+.. +.++.++++.||.+||++||+..+|+
T Consensus 588 P~~~Iefp~~~~--~~~li~~mK~CL~rdPkkR~si~eLL 625 (677)
T KOG0596|consen 588 PNHEIEFPDIPE--NDELIDVMKCCLARDPKKRWSIPELL 625 (677)
T ss_pred CCccccccCCCC--chHHHHHHHHHHhcCcccCCCcHHHh
Confidence 322222222222 23499999999999999999976653
No 72
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=9.8e-41 Score=341.75 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=202.3
Q ss_pred CcEEEeeeeeecCceEEEEEEE-----cCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTN-----IQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~-----~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
++|++.++||+|+||.||+|++ ..++..||||+++.... .+.+.+|+.++..+.+|++|..+..++..+...
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4799999999999999999974 34567899998864332 245788999999996677777777777888889
Q ss_pred EEEEecC-CCCHHHHHHHcC------------------------------------------------------------
Q 011945 79 VLVIDLL-GPSLEDLFNFCS------------------------------------------------------------ 97 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~------------------------------------------------------------ 97 (474)
+++|||+ +++|.+++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 9999999 889999886321
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 98 --------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 98 --------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
..+++..++.|+.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~~- 270 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSNY- 270 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCcccc-
Confidence 1478889999999999999999999999999999999995 6778999999999866443211
Q ss_pred ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.......++..|+|||++.+..++.++|||||||+||||++ |..||....... ..+..+.... .. ....
T Consensus 271 ----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~~-~~---~~~~ 340 (375)
T cd05104 271 ----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMIKEGY-RM---LSPE 340 (375)
T ss_pred ----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHHHhCc-cC---CCCC
Confidence 11123345678999999999999999999999999999998 899997754322 1222222111 11 1223
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
..|.++.+|+..||..||++||++.+|++.|++.
T Consensus 341 ~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 341 CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 4678999999999999999999999999988864
No 73
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.9e-41 Score=336.53 Aligned_cols=248 Identities=21% Similarity=0.296 Sum_probs=198.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|.+.++||+|+||+||+|.+..+++.||||+++... ....+..|+.+++.+.| ++|..+..+.......++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~-~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS-PWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceeeEEecCCeEEEE
Confidence 47999999999999999999999999999999876532 22347788888888775 5555555566677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++..+....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCCC
Confidence 9999 899999998766789999999999999999999999999999999999999 478899999999998765432
Q ss_pred CccccccccCCCCccCcccccccccc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHL------GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~------~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
.. ......||+.|+|||++. +..++.++|||||||++|||++|..||..... ...+..+......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~~~~~~i~~~~~~ 227 (330)
T cd05601 157 MV------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS---AKTYNNIMNFQRF 227 (330)
T ss_pred ce------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH---HHHHHHHHcCCCc
Confidence 21 112347899999999987 45678999999999999999999999976432 3333333322111
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 269 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 269 (474)
...+ ....++.++.+|+..||. +|++||+++++
T Consensus 228 ~~~~-~~~~~~~~~~~li~~ll~-~p~~R~t~~~l 260 (330)
T cd05601 228 LKFP-EDPKVSSDFLDLIQSLLC-GQKERLGYEGL 260 (330)
T ss_pred cCCC-CCCCCCHHHHHHHHHHcc-ChhhCCCHHHH
Confidence 1111 113578999999999998 99999997765
No 74
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.4e-40 Score=334.55 Aligned_cols=238 Identities=19% Similarity=0.280 Sum_probs=192.3
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||++.+..+++.||||++.... ....+..|+.+++.+.|+ +|..+..+.......++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHP-FLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC-CCcceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999886432 223577899999999865 4555556667778899999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~----- 150 (328)
T cd05593 80 GELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAA----- 150 (328)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCccc-----
Confidence 899888863 4579999999999999999999999999999999999999 4778999999999975432211
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
......||+.|+|||++.+..++.++|||||||+||||++|..||.+... .+.+..+..... .+...+++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~---~~~~~~~~~~~~-----~~p~~~~~ 220 (328)
T cd05593 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEDI-----KFPRTLSA 220 (328)
T ss_pred --ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH---HHHHHHhccCCc-----cCCCCCCH
Confidence 11345799999999999999999999999999999999999999976432 223333322211 23456889
Q ss_pred HHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011945 247 EFASYFHYCRSLRFDDKP-----DYAYLK 270 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RP-----t~~~l~ 270 (474)
++.++|..||..||++|+ ++.+++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il 249 (328)
T cd05593 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIM 249 (328)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHh
Confidence 999999999999999997 666553
No 75
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.1e-41 Score=336.38 Aligned_cols=264 Identities=20% Similarity=0.270 Sum_probs=206.6
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|.+..+++.||||++.... ....+..|+.++..+.++++|..+..+.......++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999986532 12347789999999988888888888888888999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~~----- 151 (327)
T cd05617 81 GDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGD----- 151 (327)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEeccccceeccCCCC-----
Confidence 899888863 45799999999999999999999999999999999999994 778899999999975332211
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC----cHHHHHHHHhhccccchHHHHhc
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG----TKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.....+||+.|+|||++.+..++.++|||||||+||||++|..||...... .....+..+..... .++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~ 224 (327)
T cd05617 152 --TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-----RIPR 224 (327)
T ss_pred --ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-----CCCC
Confidence 113457999999999999999999999999999999999999999643221 11222222222211 1345
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccccc
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 296 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 296 (474)
.++.++.+++.+||..||++|+++... ..++++. ..++....+|+.....
T Consensus 225 ~~~~~~~~li~~~L~~dP~~R~~~~~~-~~~~~i~---~h~~f~~~~~~~~~~~ 274 (327)
T cd05617 225 FLSVKASHVLKGFLNKDPKERLGCQPQ-TGFSDIK---SHTFFRSIDWDLLEKK 274 (327)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCC-CCHHHHH---cCCCCCCCCHHHHHhC
Confidence 678999999999999999999985421 1122221 3355566788876543
No 76
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1e-40 Score=334.72 Aligned_cols=257 Identities=21% Similarity=0.275 Sum_probs=198.1
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHH-HHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAK-LYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~-il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
+.||+|+||+||+|++..+++.||+|++.... ....+..|.. +++.+.| ++|..+..++...+..+++|||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH-PFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCC-CCCCceeEEEEcCCeEEEEEeCCC
Confidence 47999999999999999999999999876432 1123444444 3555665 45555666667778899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~---- 151 (325)
T cd05602 80 GGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNG---- 151 (325)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCC----
Confidence 7899998874 4578999999999999999999999999999999999999 4778999999999975433221
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCc
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 245 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 245 (474)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+..... .+...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~i~~~~~-----~~~~~~~ 220 (325)
T cd05602 152 ---TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---TAEMYDNILNKPL-----QLKPNIT 220 (325)
T ss_pred ---CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC---HHHHHHHHHhCCc-----CCCCCCC
Confidence 1234679999999999999999999999999999999999999998643 3334444433222 1234688
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccc
Q 011945 246 TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (474)
Q Consensus 246 ~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 295 (474)
.++.++|..||..||.+||++.+. +.++. +..+...++|.....
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~---~~~i~---~~~~~~~~~~~~~~~ 264 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKDD---FMEIK---NHIFFSPINWDDLIN 264 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCC---HHHHh---cCcccCCCCHHHHHh
Confidence 999999999999999999997643 22222 223445678876643
No 77
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-40 Score=333.60 Aligned_cols=259 Identities=18% Similarity=0.279 Sum_probs=201.0
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
..++|+++++||+|+||.||++++..++..||+|++..... ...+.+|+++++.++|++++.. ..+...+...++|
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~-~~~~~~~~~~~lv 81 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF-YGAFYSDGEISIC 81 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeE-EEEEEECCEEEEE
Confidence 35789999999999999999999999999999998865432 2458899999999986655554 4455667788999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~-gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|||+ +++|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++ .++.+||+|||++......
T Consensus 82 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 82 MEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred eecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEEEccCccccccccc
Confidence 9999 7899999974 44689999999999999999999986 699999999999994 6788999999999765432
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHH------------
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK------------ 227 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~------------ 227 (474)
.. ....||..|+|||++.+..++.++|||||||+||||++|+.||...........+..
T Consensus 158 ~~---------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (331)
T cd06649 158 MA---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHS 228 (331)
T ss_pred cc---------ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccc
Confidence 21 345799999999999999999999999999999999999999975432111110000
Q ss_pred ---------------------------HhhccccchHHHH-hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 228 ---------------------------ISEKKVSTSIEAL-CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 228 ---------------------------i~~~~~~~~~~~l-~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
..........+.. ...+++++.+||.+||.+||++||++.+| |++.|.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~el---l~h~~~~ 305 (331)
T cd06649 229 ISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML---MNHTFIK 305 (331)
T ss_pred cCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHH---hcChHHh
Confidence 0000000000000 12467899999999999999999998877 5555544
Q ss_pred c
Q 011945 280 E 280 (474)
Q Consensus 280 ~ 280 (474)
.
T Consensus 306 ~ 306 (331)
T cd06649 306 R 306 (331)
T ss_pred h
Confidence 3
No 78
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.8e-40 Score=333.88 Aligned_cols=264 Identities=19% Similarity=0.278 Sum_probs=203.0
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|.+..+++.||+|++.... ....+..|+.++..+.+|++|..+..+.......++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999876532 12346788888888866777777777778888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~----- 151 (329)
T cd05618 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD----- 151 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCC-----
Confidence 899888763 4579999999999999999999999999999999999999 4778999999999975432221
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC------cHHHHHHHHhhccccchHHHH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG------TKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~------~~~~~~~~i~~~~~~~~~~~l 240 (474)
......||..|+|||++.+..++.++|||||||++|||++|..||...... .....+..+..... .+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~ 224 (329)
T cd05618 152 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-----RI 224 (329)
T ss_pred --ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-----CC
Confidence 123457999999999999999999999999999999999999999632211 11122222222221 23
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccccc
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 296 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 296 (474)
+..++.++.++|.+||..||++||++.... .+.+++ ..++...++|......
T Consensus 225 p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~-~~~~i~---~hp~f~~~~~~~~~~~ 276 (329)
T cd05618 225 PRSLSVKAASVLKSFLNKDPKERLGCHPQT-GFADIQ---GHPFFRNVDWDLMEQK 276 (329)
T ss_pred CCCCCHHHHHHHHHHhcCCHHHcCCCCCCC-CHHHHh---cCCCCCCCCHHHHHcC
Confidence 456789999999999999999999842110 011121 2355566788866543
No 79
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-41 Score=353.14 Aligned_cols=262 Identities=19% Similarity=0.265 Sum_probs=202.9
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEE-EeE-----e-CCE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRW-FGV-----E-GDY 77 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~-~~~-----~-~~~ 77 (474)
.+++|.+.|.+|||+.||+|.+...+..||+|.+-... ....+.+|+.+|+.|++|++|+.|.. ... . .-.
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 46889999999999999999998887999999754442 23458899999999998877777655 211 1 245
Q ss_pred EEEEEecC-CCCHHHHHH-HcCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 78 NVLVIDLL-GPSLEDLFN-FCSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~-~~~~~l~~~~~~~i~~qi~~gL~yLHs~g--IiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
++|.|||| |++|-|+++ +....|++.++++|+.|+++|+.+||..+ |||||||-+||||+ .++.+||||||.|
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls---~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS---ADGNYKLCDFGSA 193 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc---CCCCEEeCccccc
Confidence 68999999 589999997 33456999999999999999999999987 99999999999995 7889999999998
Q ss_pred cccccCC-Ccccccc-ccCCCCccCcccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH
Q 011945 154 KRYRDTA-THQHIPY-RENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 154 ~~~~~~~-~~~~~~~-~~~~~~~GT~~Y~APE~~~---~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (474)
....... ....+.+ ...-....|+.|.|||++. |.+.++|+|||+|||+||.||....||.+... ..|
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------laI 266 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------LAI 266 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------eeE
Confidence 6433322 1111100 0111234699999999865 77899999999999999999999999987421 123
Q ss_pred hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 229 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
...++..+. ...++..|.+||..||+.||++||++.++...+.++.....
T Consensus 267 lng~Y~~P~---~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 267 LNGNYSFPP---FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred EeccccCCC---CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 333322211 14678999999999999999999998888777777765544
No 80
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.6e-41 Score=341.17 Aligned_cols=270 Identities=20% Similarity=0.291 Sum_probs=204.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|+++++||.|+||+||+|++..+++.||||++.... ....+..|+.+++.++| ++|..+..++..+...++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN-PWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceEEEEEcCCeEEEE
Confidence 47999999999999999999999999999999886431 22346789999999985 4555555666778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 80 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 80 MEYLPGGDMMTLLMK-KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred ECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceeccccc
Confidence 9999 8899999874 4579999999999999999999999999999999999999 478899999999997654321
Q ss_pred Ccccc-----------------cc--------------ccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 011945 161 THQHI-----------------PY--------------RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 209 (474)
Q Consensus 161 ~~~~~-----------------~~--------------~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG 209 (474)
..... +. ......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 10000 00 001134799999999999999999999999999999999999
Q ss_pred CCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccc
Q 011945 210 SLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFD 289 (474)
Q Consensus 210 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~d 289 (474)
..||.+... .+.+..+.........+. ...+++++.++|..|+. +|.+|++...+.++|.+. +...++
T Consensus 236 ~~Pf~~~~~---~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~-------~~~~~~ 303 (364)
T cd05599 236 YPPFCSDNP---QETYRKIINWKETLQFPD-EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP-------FFKGVD 303 (364)
T ss_pred CCCCCCCCH---HHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC-------CcCCCC
Confidence 999987432 333333332211111110 12468899999999996 999999843344444443 333456
Q ss_pred cccc
Q 011945 290 WTIL 293 (474)
Q Consensus 290 w~~~ 293 (474)
|...
T Consensus 304 ~~~~ 307 (364)
T cd05599 304 WEHI 307 (364)
T ss_pred HHHH
Confidence 7643
No 81
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.5e-40 Score=335.59 Aligned_cols=260 Identities=19% Similarity=0.304 Sum_probs=202.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCC-CCCceeEEEeEeCC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGG-TGIPNLRWFGVEGD 76 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~-~~i~~l~~~~~~~~ 76 (474)
.++|++.+.||.|+||.||+|.+.. +++.||+|++..... .+.+..|+.++..+.+| +++..+..+...+.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 4689999999999999999997543 457899998865432 23577899999999544 55555555555667
Q ss_pred EEEEEEecC-CCCHHHHHHHcC----------------------------------------------------------
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCS---------------------------------------------------------- 97 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~---------------------------------------------------------- 97 (474)
..+++|||+ +++|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 788999999 889999885321
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccccCCCCcc
Q 011945 98 --RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG 175 (474)
Q Consensus 98 --~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~G 175 (474)
..+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||++..+...... .......+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~-----~~~~~~~~ 237 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDY-----VRKGDARL 237 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcch-----hhccCCCC
Confidence 2578999999999999999999999999999999999995 6788999999999876432211 11233456
Q ss_pred CccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHH
Q 011945 176 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHY 254 (474)
Q Consensus 176 T~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~ 254 (474)
+..|+|||++.+..++.++|||||||+||||++ |..||.+...... ....+.... . ......+++++.+++..
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~~~~~~~~-~---~~~~~~~~~~~~~l~~~ 311 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FCRRLKEGT-R---MRAPEYATPEIYSIMLD 311 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HHHHHhccC-C---CCCCccCCHHHHHHHHH
Confidence 788999999999999999999999999999998 9999987433221 111111111 1 11234567899999999
Q ss_pred HhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 255 CRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 255 cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
||+.+|++||++.+|++.|++++..
T Consensus 312 cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 312 CWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999998853
No 82
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.3e-40 Score=325.94 Aligned_cols=262 Identities=19% Similarity=0.218 Sum_probs=203.6
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.|++.++||+|+||+||++.+..+++.||||++.... ....+.+|+.+++.++|++++. +...+..++..+++|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS-LAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEee-eeeeecCCCeEEEEE
Confidence 4899999999999999999998899999999875432 1234678999999998655554 444556667899999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||+ +++|.+++... ...+++..+..++.||+.||.|||+.||+||||||+||++ ++.+.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCC
Confidence 999 78999887643 3469999999999999999999999999999999999999 467899999999998654322
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. .....|+..|+|||++.+..++.++|||||||++|||++|..||.+.......+.+...... .....
T Consensus 157 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~----~~~~~ 224 (285)
T cd05605 157 T--------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE----DQEEY 224 (285)
T ss_pred c--------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh----ccccc
Confidence 1 12347899999999999989999999999999999999999999875443222222211111 11123
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCC-----CHHHHHHHHHHHHHHcCCCCCCccccccccc
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKP-----DYAYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RP-----t~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 295 (474)
...++..+.+|+..||..||++|| ++++| +.+ .+...++|...+.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l---~~~-------~~~~~~~~~~~~~ 274 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEV---KAH-------PFFRTANFKRLEA 274 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHH---hcC-------cCccCCCHHHHhh
Confidence 356789999999999999999999 55554 222 3334567876654
No 83
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=337.37 Aligned_cols=254 Identities=24% Similarity=0.338 Sum_probs=217.3
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
.+...|++.+.||.|.||.||+|+.+.+|+.||+|++..... ...+.+|+.+|+.|.+|++|..+..........
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 356689999999999999999999999999999998866543 247899999999999888888888888888899
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC-CCeEEEEecCCcccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLAKRY 156 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~-~~~vkL~DFGla~~~ 156 (474)
++|||+| |+.|.+.+... .+++..+..++.||+.++.|||+.||+||||||+|||+...+. .+.+|++|||++...
T Consensus 112 ~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 9999999 89999998754 3999999999999999999999999999999999999975433 458999999999987
Q ss_pred ccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
..... ....+||+.|+|||++....|+..+||||+||++|.|++|..||.+... .....++....+...
T Consensus 190 ~~~~~--------~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~---~~~~~~i~~~~~~f~ 258 (382)
T KOG0032|consen 190 KPGER--------LHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETE---FEIFLAILRGDFDFT 258 (382)
T ss_pred cCCce--------EeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCCh---hHHHHHHHcCCCCCC
Confidence 76221 2457999999999999999999999999999999999999999988543 344456666555332
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
...+..++..++++|..|+..||..|+++.++++
T Consensus 259 -~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 259 -SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -CCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 2334678899999999999999999999888755
No 84
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.4e-40 Score=330.56 Aligned_cols=265 Identities=22% Similarity=0.270 Sum_probs=202.9
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++++.||+|+||+||++.+..+++.||||++... .....+..|+.++..++| ++|..+..++..+...|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR-RWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-CCCCceEEEEecCCeEEEE
Confidence 5799999999999999999999999999999987642 123347788999888864 5556666666778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..+....
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCCC
Confidence 9998 899999998666789999999999999999999999999999999999999 477899999999997654432
Q ss_pred CccccccccCCCCccCccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~-----~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.. ..+.+..+.......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~---~~~~~~~i~~~~~~~ 227 (331)
T cd05597 157 TV------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIMNHKEHF 227 (331)
T ss_pred Cc------cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCcc
Confidence 21 1123469999999999873 347889999999999999999999997643 334444443322222
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCC--CCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
..+.....+++++.++|..||..+++. |+++.++ +.+ ++...++|....
T Consensus 228 ~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~---l~h-------p~~~~~~~~~~~ 278 (331)
T cd05597 228 QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDF---KDH-------PFFEGIDWDNIR 278 (331)
T ss_pred cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHH---hcC-------CCCCCCCHHHHh
Confidence 222223457899999999988753332 5665444 443 334456777643
No 85
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3e-40 Score=331.13 Aligned_cols=256 Identities=21% Similarity=0.282 Sum_probs=196.7
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHH-HHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAK-LYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~-il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
+.||+|+||+||+|.+..+++.||||++.... ....+..|.. +++.++|+ +|..+..........++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp-~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHP-FLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCC-CCCCeeEEEEeCCEEEEEEcCCC
Confidence 47999999999999999999999999876431 1223445554 44566654 5555555566778899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~---- 151 (323)
T cd05575 80 GGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSK---- 151 (323)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCC----
Confidence 8899888874 5579999999999999999999999999999999999999 4778999999999875432211
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCc
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 245 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 245 (474)
......||+.|+|||++.+..++.++|||||||++|||++|..||.... ..+.+..+..... .+...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~-----~~~~~~~ 220 (323)
T cd05575 152 ---TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---TAEMYDNILNKPL-----RLKPNIS 220 (323)
T ss_pred ---ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC---HHHHHHHHHcCCC-----CCCCCCC
Confidence 1234579999999999999999999999999999999999999998643 3344444443322 1235678
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 246 TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 246 ~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
.++.++|..||+.||++||++.+ .+.+++ ..++...++|....
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~---~~~~il---~~~~~~~~~~~~~~ 263 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGAKD---DFLEIK---NHVFFSSINWDDLV 263 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCCCC---CHHHHH---cCCCcCCCCHHHHh
Confidence 99999999999999999999752 222322 12344456776654
No 86
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1e-40 Score=335.57 Aligned_cols=259 Identities=19% Similarity=0.271 Sum_probs=202.6
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|.+..+++.||||+++... ....+..|..++..+.+|++|..+..++......|++|||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 47999999999999999999999999886432 12347789999999977777877877788888999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~----- 151 (329)
T cd05588 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGD----- 151 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCC-----
Confidence 899888863 4679999999999999999999999999999999999999 4778999999999975322211
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCc------HHHHHHHHhhccccchHHHH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~------~~~~~~~i~~~~~~~~~~~l 240 (474)
......||..|+|||++.+..++.++|||||||++|||++|+.||....... ....+..+..... .+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 224 (329)
T cd05588 152 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-----RI 224 (329)
T ss_pred --ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-----CC
Confidence 1234579999999999999999999999999999999999999996432111 1112222222221 23
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHH---HHHHHHHHHHHcCCCCCCcccccccc
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAY---LKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~---l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
+..++.++.++|..||..||.+|+++.. +.+++.+ ++...++|....
T Consensus 225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h-------p~~~~~~~~~~~ 274 (329)
T cd05588 225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH-------PFFRNIDWDLLE 274 (329)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC-------CCCCCCCHHHHH
Confidence 4567899999999999999999998432 2233332 334456787654
No 87
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.4e-40 Score=338.72 Aligned_cols=253 Identities=22% Similarity=0.266 Sum_probs=194.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|+++++||+|+||.||+|++..+++.||||++... .....+.+|+.+++.+.|++++ .+......+...|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv-~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVV-KLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcc-eEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999987542 2234578899999999865555 445555677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|..+....
T Consensus 80 ~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 80 MDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCccccccc
Confidence 9999 8999999874 4568999999999999999999999999999999999999 477899999999986442110
Q ss_pred Cccc------------------------------------cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHH
Q 011945 161 THQH------------------------------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM 204 (474)
Q Consensus 161 ~~~~------------------------------------~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ 204 (474)
.... .........+||+.|||||++.+..++.++|||||||+||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0000 0000112457999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCC---CHHHH
Q 011945 205 YFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKP---DYAYL 269 (474)
Q Consensus 205 elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RP---t~~~l 269 (474)
||++|+.||.+.... ..+..+......... .....+++++.++|.+|+ .+|.+|+ ++.++
T Consensus 236 ell~G~~Pf~~~~~~---~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 236 EMLVGQPPFLADTPA---ETQLKVINWETTLHI-PSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred ehhhCCCCCCCCCHH---HHHHHHhccCccccC-CCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 999999999875432 222222211111100 012357889999999977 5999999 65555
No 88
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.8e-40 Score=338.43 Aligned_cols=253 Identities=21% Similarity=0.269 Sum_probs=193.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|.++++||.|+||+||+|.+..+++.||||++.... ....+..|+++++.+.|++ |..+..++....+.|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPW-VVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCC-cceEEEEEEcCCeeEEE
Confidence 47999999999999999999999999999999875421 2245778999999998654 55555666778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 80 MEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEEeeccccccccccc
Confidence 9999 8999999874 45799999999999999999999999999999999999994 77899999999997543211
Q ss_pred Cccc-------ccc---------------------------------ccCCCCccCccccccccccCCCCCchhhHHHHH
Q 011945 161 THQH-------IPY---------------------------------RENKNLTGTARYASMNTHLGIEQSRRDDLESLG 200 (474)
Q Consensus 161 ~~~~-------~~~---------------------------------~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlG 200 (474)
.... ... ......+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0000 000 000135799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCC---CHHHH
Q 011945 201 YVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKP---DYAYL 269 (474)
Q Consensus 201 vil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RP---t~~~l 269 (474)
|+||||++|..||.+... ...+..+.........+ -...++.++.+||.+||. +|.+|+ ++.++
T Consensus 236 vil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p-~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~ 302 (377)
T cd05629 236 AIMFECLIGWPPFCSENS---HETYRKIINWRETLYFP-DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI 302 (377)
T ss_pred hhhhhhhcCCCCCCCCCH---HHHHHHHHccCCccCCC-CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence 999999999999976433 23333333211111000 012467899999999997 777764 65554
No 89
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4e-40 Score=337.87 Aligned_cols=255 Identities=21% Similarity=0.244 Sum_probs=194.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
..|+++++||+|+||+||+|++..+++.||||++.... ....+..|+.+++.++|+ +|..+..+..+....++|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~-~iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYFV 79 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCC-CeeeeEEEEecCCEEEEE
Confidence 36999999999999999999999999999999886432 123578899999999855 555555666778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||| +..+.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 80 MDYIPGGDMMSLLIR-MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred EecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCccccccc
Confidence 9999 8899999874 4569999999999999999999999999999999999999 467899999999986542111
Q ss_pred Cccc----------------------------------------cccccCCCCccCccccccccccCCCCCchhhHHHHH
Q 011945 161 THQH----------------------------------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLG 200 (474)
Q Consensus 161 ~~~~----------------------------------------~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlG 200 (474)
.... .........+||..|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0000 000011345799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHh--cCCCCCCCCHHHHH
Q 011945 201 YVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCR--SLRFDDKPDYAYLK 270 (474)
Q Consensus 201 vil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl--~~dp~~RPt~~~l~ 270 (474)
|+||||++|..||...... .....+.........+ ....+++++.+||.+|+ ..++..||++++|+
T Consensus 236 ~il~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~~-~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPT---ETQLKVINWENTLHIP-PQVKLSPEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred hHHHHHHhCCCCCcCCCHH---HHHHHHHccccccCCC-CCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 9999999999999864432 2222222111111111 11247899999999854 45555699987774
No 90
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.1e-40 Score=336.47 Aligned_cols=249 Identities=21% Similarity=0.260 Sum_probs=195.9
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeE-----eC
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGV-----EG 75 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~-----~~ 75 (474)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|++++..+..+.. ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 5689999999999999999999999999999999876432 23457789999999998777776655533 23
Q ss_pred CEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 76 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 76 ~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
...|+||||++++|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 102 ~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLART 175 (364)
T ss_pred CeEEEEEeCCCCCHHHHHH---hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEeCCCccc
Confidence 4579999999999988875 358899999999999999999999999999999999999 4778999999999986
Q ss_pred cccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
...... .....||..|+|||++.+..++.++|||||||+||||++|+.||.+.... ..+.++.......
T Consensus 176 ~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~ 244 (364)
T cd07875 176 AGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI---DQWNKVIEQLGTP 244 (364)
T ss_pred cCCCCc--------ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCC
Confidence 543221 13357899999999999999999999999999999999999999875432 2222221100000
Q ss_pred -------------------------hHHHH------------hcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 236 -------------------------SIEAL------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 236 -------------------------~~~~l------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
....+ ....+.++.+||.+||..||.+||++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L 316 (364)
T cd07875 245 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316 (364)
T ss_pred CHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 00000 011245789999999999999999987663
No 91
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.4e-40 Score=336.00 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=197.9
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeE-----e
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGV-----E 74 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~-----~ 74 (474)
.+.++|++++.||.|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|++++..+..+.. .
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 46789999999999999999999999999999999876432 22357789999999998777766654432 2
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
....|++|++++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~ 166 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGLAR 166 (343)
T ss_pred cCcEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC---CCCCEEEcCCccce
Confidence 24578999999999999886 45799999999999999999999999999999999999994 77899999999998
Q ss_pred ccccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc-
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK- 232 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~- 232 (474)
...... ....||..|+|||++.+ ..++.++|||||||++|+|++|..||.+.........+.......
T Consensus 167 ~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (343)
T cd07878 167 QADDEM----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPS 236 (343)
T ss_pred ecCCCc----------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 654321 24578999999999987 568999999999999999999999997643221111111110000
Q ss_pred ----------------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 ----------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 ----------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.......+...+++.+.+||.+||..||++||++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell 296 (343)
T cd07878 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEAL 296 (343)
T ss_pred HHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 00111222345677889999999999999999987764
No 92
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-40 Score=322.21 Aligned_cols=254 Identities=19% Similarity=0.237 Sum_probs=203.8
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCC------E
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD------Y 77 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~------~ 77 (474)
.|..+++||+|+||+||+|+++.+|+.||+|.+..... .....+|+.+++.|+|.++|..+..+....+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 47778899999999999999999999999998876544 2347999999999999886666666655544 7
Q ss_pred EEEEEecCCCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 78 NVLVIDLLGPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~~---~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
.++|+||+..+|..+++... ..++...++.++.||+.||+|||++||+||||||+||||+ +.+.+||+|||+|+
T Consensus 92 l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~---~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 92 LYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS---SSGVLKLADFGLAR 168 (323)
T ss_pred EEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC---CCCcEeeeccchHH
Confidence 89999999999999999776 4588899999999999999999999999999999999995 78999999999999
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc-
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK- 232 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~- 232 (474)
.+.-+. +.....++|..|.|||++.|. .|+...||||+|||+.||++++..|.+..+.+....+..+....
T Consensus 169 a~~ip~-------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 169 AFSIPM-------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN 241 (323)
T ss_pred HhcCCc-------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 655332 223456889999999999997 59999999999999999999999999876543333333332211
Q ss_pred ---cc------------------chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 ---VS------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 ---~~------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
++ .......+...+...+++..||+.+|.+|.+++.+++
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence 00 0011111222357899999999999999999876643
No 93
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.9e-40 Score=323.43 Aligned_cols=236 Identities=19% Similarity=0.243 Sum_probs=187.6
Q ss_pred eeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
||+|+||+||+|.+..+++.||||++..... ...+..|+.+++.++| +++..+..++......+++|||+ +++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS-RFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCC-CcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 7999999999999999999999998754321 2346789999999975 55555666666777889999998 889
Q ss_pred HHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 89 LEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 89 L~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+.....
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~~---- 152 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDLGLAVELKDGQS---- 152 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCccceecCCCCc----
Confidence 9887743 234699999999999999999999999999999999999994 678899999999976644322
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHH-HHHHHHhhccccchHHHHhcCC
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVSTSIEALCRGY 244 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~ 244 (474)
......||..|+|||++.+..++.++|||||||++|||++|+.||......... .....+.... ..+...+
T Consensus 153 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 224 (280)
T cd05608 153 ---KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS-----VTYPDKF 224 (280)
T ss_pred ---cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC-----CCCcccC
Confidence 123457999999999999999999999999999999999999999764332211 1112211111 1223568
Q ss_pred cHHHHHHHHHHhcCCCCCCCCH
Q 011945 245 PTEFASYFHYCRSLRFDDKPDY 266 (474)
Q Consensus 245 p~~l~~li~~cl~~dp~~RPt~ 266 (474)
+.++.+++..||+.||++||++
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~ 246 (280)
T cd05608 225 SPASKSFCEALLAKDPEKRLGF 246 (280)
T ss_pred CHHHHHHHHHHhcCCHHHhcCC
Confidence 8999999999999999999954
No 94
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.5e-40 Score=337.43 Aligned_cols=246 Identities=20% Similarity=0.253 Sum_probs=191.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.++|+++++||+|+||.||+|++..+++.||||++..... ...+.+|+++++.++|.+++. +..+...+...+++|
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVK-CHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcce-eeeEeccCCeEEEEE
Confidence 3578899999999999999999999999999998854432 245889999999998655554 445556777889999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|.+. ....+..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.+.....
T Consensus 152 e~~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 152 EFMDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred ecCCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEcccccceecccccc
Confidence 999 6777543 2457788899999999999999999999999999999994 778999999999987643221
Q ss_pred ccccccccCCCCccCccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~-----~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
......||..|+|||++.. ...+.++|||||||+||||++|+.||......+.......+.....
T Consensus 224 -------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--- 293 (353)
T PLN00034 224 -------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP--- 293 (353)
T ss_pred -------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC---
Confidence 1234579999999998743 2345799999999999999999999975433333332222221111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
......++.++.+||..||..||++||++.+|++
T Consensus 294 -~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 294 -PEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred -CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1223567899999999999999999999887743
No 95
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=317.56 Aligned_cols=259 Identities=22% Similarity=0.287 Sum_probs=215.0
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
.+.+.|++.+.||+|.|+.||++.+..+|+.+|+|+++.+. ..+.+.+|++|.+.|+|++++ .+.....+..+.|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~Iv-rL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV-RLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEe-ehhhhhcccceeE
Confidence 56788999999999999999999999999999999877643 456799999999999965554 4544455677889
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
||+|++ |+.|..-|-. ..-+++..+-.++.||+++|.|+|.+||||||+||.|+|+...+..--+||+|||+|..+.+
T Consensus 87 lvFe~m~G~dl~~eIV~-R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVA-REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred EEEecccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 999999 7777554431 24588999999999999999999999999999999999998766777899999999998873
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
.. ....+.||+.|||||++...+|+..+|||+.|||||-||.|.+||.+ ++....|+.|.......+.+
T Consensus 166 g~--------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~---~~~~rlye~I~~g~yd~~~~ 234 (355)
T KOG0033|consen 166 GE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD---EDQHRLYEQIKAGAYDYPSP 234 (355)
T ss_pred cc--------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC---ccHHHHHHHHhccccCCCCc
Confidence 22 13567999999999999999999999999999999999999999988 34566777777766544432
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
.+..+.++.++|+.+||..||.+|.|+.|. |++.++.
T Consensus 235 -~w~~is~~Ak~LvrrML~~dP~kRIta~EA---L~HpWi~ 271 (355)
T KOG0033|consen 235 -EWDTVTPEAKSLIRRMLTVNPKKRITADEA---LKHPWIC 271 (355)
T ss_pred -ccCcCCHHHHHHHHHHhccChhhhccHHHH---hCCchhc
Confidence 346788999999999999999999997665 5555443
No 96
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-41 Score=342.45 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=204.2
Q ss_pred eeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCCHH
Q 011945 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSLE 90 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL~ 90 (474)
+||+|.||+||-|+|..+...+|||-+..+.. .+-+..|+.+.+.|+|.|+|.++..+...+ ++-|.||-. ||+|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG-f~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG-FFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC-eEEEEeecCCCCcHH
Confidence 68999999999999999999999997655433 345899999999999988888887765555 556666655 99999
Q ss_pred HHHHHcCCCC--CHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccc
Q 011945 91 DLFNFCSRKL--SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 168 (474)
Q Consensus 91 ~li~~~~~~l--~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (474)
+++...-+++ ++.++-.+..||++||.|||++.|||||||-+|+||. .-.|.+||+|||.++.+-.-..
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP------- 731 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINP------- 731 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCc-------
Confidence 9999777777 8999999999999999999999999999999999996 5679999999999987654322
Q ss_pred cCCCCccCccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 169 ENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 169 ~~~~~~GT~~Y~APE~~~~~~--~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
...++.||..|||||++..++ |+.++|||||||++.||.||++||..+... ...+.++..-+..+++ +..++.
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp--qAAMFkVGmyKvHP~i---Peelsa 806 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP--QAAMFKVGMYKVHPPI---PEELSA 806 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh--hHhhhhhcceecCCCC---cHHHHH
Confidence 235789999999999998765 899999999999999999999999876532 2333344433333333 345678
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 247 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
+.+.||.+|+..||.+||++.+| |.+.|...+
T Consensus 807 eak~FilrcFepd~~~R~sA~~L---L~DpFlq~~ 838 (1226)
T KOG4279|consen 807 EAKNFILRCFEPDPCDRPSAKDL---LQDPFLQHN 838 (1226)
T ss_pred HHHHHHHHHcCCCcccCccHHHh---ccCcccccC
Confidence 89999999999999999997766 666665443
No 97
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7e-40 Score=329.77 Aligned_cols=265 Identities=22% Similarity=0.287 Sum_probs=204.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.++||+|+||+||++++..+++.||+|++.... ....+..|+.++..+.| +++..+..+.......++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN-QWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC-CCEeeEEEEEecCCEEEEE
Confidence 57999999999999999999999999999999875321 12236778888888764 5566666667778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+....
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCC
Confidence 9998 899999998666789999999999999999999999999999999999999 477899999999997654332
Q ss_pred CccccccccCCCCccCccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~-----~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
.. ......||+.|+|||++.+ ..++.++|||||||+||||++|+.||... +..+.+.++.......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~---~~~~~~~~i~~~~~~~ 227 (332)
T cd05623 157 TV------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE---SLVETYGKIMNHKERF 227 (332)
T ss_pred cc------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC---CHHHHHHHHhCCCccc
Confidence 21 1123579999999999863 45789999999999999999999999864 3344555554433222
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCC--CCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
..+.....+++++.+|+.+|+..+++. |+++++++ .+ ++...++|+...
T Consensus 228 ~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~---~h-------~~f~~~~~~~~~ 278 (332)
T cd05623 228 QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFK---QH-------PFFTGIDWDNIR 278 (332)
T ss_pred cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHh---CC-------CCcCCCCHHHHh
Confidence 223334567899999999999765544 56755553 32 334456777553
No 98
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.1e-40 Score=334.31 Aligned_cols=253 Identities=19% Similarity=0.211 Sum_probs=195.7
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEe-----
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 74 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~----- 74 (474)
.+.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.++|++++..+..+...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 356899999999999999999999999999999998764322 24577899999999987777776655432
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
....+++|||++++|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 167 (355)
T ss_pred cceeEEEhhhhcccHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEeeCcccc
Confidence 23579999999989888775 358999999999999999999999999999999999999 477899999999998
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc--
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-- 232 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-- 232 (474)
....... .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+.................
T Consensus 168 ~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (355)
T cd07874 168 TAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239 (355)
T ss_pred cCCCccc--------cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 6543221 134578999999999999999999999999999999999999998643211111110000000
Q ss_pred -----ccc---------------hHH------------HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 -----VST---------------SIE------------ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 -----~~~---------------~~~------------~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
... ... ......+.++.+||.+||..||++||++.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell 309 (355)
T cd07874 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEAL 309 (355)
T ss_pred HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHh
Confidence 000 000 00112356789999999999999999987764
No 99
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.5e-40 Score=324.23 Aligned_cols=254 Identities=23% Similarity=0.326 Sum_probs=202.6
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCC-----eEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN-----EEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~-----~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
.++|++.+.||+|+||.||+|.+...+ ..||+|.+..... ...+.+|+.++..+.|++++..+ .+......
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~-~~~~~~~~ 82 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLL-GVCTKEQP 82 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEE-EEEcCCCc
Confidence 357999999999999999999976554 6899998764432 23578899999999866555544 45556677
Q ss_pred EEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC
Q 011945 78 NVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~---------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~ 141 (474)
.+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++ +
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~---~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG---E 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc---C
Confidence 89999998 789999987432 4588999999999999999999999999999999999994 6
Q ss_pred CCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCc
Q 011945 142 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGT 220 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~ 220 (474)
++.+||+|||+++....... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||.+...
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-- 232 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-- 232 (283)
T ss_pred CCcEEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 78899999999976543221 111233467889999999998899999999999999999998 9999987543
Q ss_pred HHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 221 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
.+.+..+..... ......+|+++.+|+..||+.||++||++.+|.+.|+.
T Consensus 233 -~~~~~~i~~~~~----~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 233 -QEVIEMIRSRQL----LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHHHcCCc----CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 233333332222 12345789999999999999999999999999988864
No 100
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.9e-40 Score=333.86 Aligned_cols=267 Identities=21% Similarity=0.276 Sum_probs=203.6
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.++||+|+||+||++++..+++.||||++.... ....+..|..++..+. +++|..+..+.....+.|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 57999999999999999999999999999999875421 1233677888887776 56666777777788899999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ |++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCCC
Confidence 9998 899999998666789999999999999999999999999999999999999 477889999999998765432
Q ss_pred CccccccccCCCCccCccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~-----~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
.. ......||+.|+|||++.+ ..++.++|||||||+||||++|+.||.... ..+.+..+.......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~---~~~~~~~i~~~~~~~ 227 (331)
T cd05624 157 TV------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIMNHEERF 227 (331)
T ss_pred ce------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC---HHHHHHHHHcCCCcc
Confidence 21 1123579999999999876 457899999999999999999999997643 334444444322222
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
..+.....+++++.+++.+||..++ +|+....+.+++.+ .+...++|+...
T Consensus 228 ~~p~~~~~~~~~~~~li~~ll~~~~-~~~~~~~~~~~~~h-------~~f~~~~~~~~~ 278 (331)
T cd05624 228 QFPSHITDVSEEAKDLIQRLICSRE-RRLGQNGIEDFKKH-------AFFEGIDWENIR 278 (331)
T ss_pred cCCCccccCCHHHHHHHHHHccCch-hhcCCCCHHHHhcC-------CCcCCCCHHHHh
Confidence 2222234578999999999998655 44322223333333 333456787653
No 101
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.9e-40 Score=328.79 Aligned_cols=236 Identities=22% Similarity=0.281 Sum_probs=192.3
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||+||+|.+..+++.||||++... ........|..++..+.+|++|..+..+.......+++|||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4799999999999999999999999987643 223446678888887656777777777777888999999998 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~----- 151 (316)
T cd05619 81 GDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMCKENMLGDA----- 151 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcceECCCCCC-----
Confidence 899999874 35789999999999999999999999999999999999994 778999999999975432211
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
......||..|+|||++.+..++.++|||||||++|||++|..||.+... .+.+..+..... .+...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~i~~~~~-----~~~~~~~~ 221 (316)
T cd05619 152 --KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---EELFQSIRMDNP-----CYPRWLTR 221 (316)
T ss_pred --ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCC-----CCCccCCH
Confidence 12345799999999999999999999999999999999999999987432 333333322211 12245788
Q ss_pred HHHHHHHHHhcCCCCCCCCHH
Q 011945 247 EFASYFHYCRSLRFDDKPDYA 267 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~ 267 (474)
++.+++.+||..||++||++.
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~ 242 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVK 242 (316)
T ss_pred HHHHHHHHHhccCHhhcCCCh
Confidence 999999999999999999975
No 102
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.1e-40 Score=320.79 Aligned_cols=261 Identities=20% Similarity=0.256 Sum_probs=203.6
Q ss_pred CCCccCCcEEEeeeeeecCceEEEEEEEcCCCe----EEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeE
Q 011945 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGV 73 (474)
Q Consensus 1 m~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~ 73 (474)
|+....++|+++++||+|+||+||+|.+..+++ .||||++..... ...+..|+.+++.+.|++++..+. ++.
T Consensus 1 ~~~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~-~~~ 79 (279)
T cd05109 1 MRILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLG-ICL 79 (279)
T ss_pred CcccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEE-EEc
Confidence 566778899999999999999999999877766 489998765433 235778999999888665554444 444
Q ss_pred eCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCC
Q 011945 74 EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (474)
Q Consensus 74 ~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (474)
.. ..+++|+++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ +.+.+||+|||+
T Consensus 80 ~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG~ 155 (279)
T cd05109 80 TS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFGL 155 (279)
T ss_pred CC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCCc
Confidence 33 356777777 8899999876566799999999999999999999999999999999999994 677899999999
Q ss_pred ccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhc
Q 011945 153 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEK 231 (474)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~ 231 (474)
++.+........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||........ ...+...
T Consensus 156 ~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~~~~ 227 (279)
T cd05109 156 ARLLDIDETEYH-----ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI---PDLLEKG 227 (279)
T ss_pred eeecccccceee-----cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHCC
Confidence 987654322111 112245678999999999899999999999999999998 9999976543222 2222221
Q ss_pred cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011945 232 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 278 (474)
.. . .....++.++.+++..||..||++||++.++.+.|+++..
T Consensus 228 ~~-~---~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 228 ER-L---PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred Cc-C---CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11 1 1124578999999999999999999999999988887753
No 103
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.6e-40 Score=329.93 Aligned_cols=235 Identities=20% Similarity=0.260 Sum_probs=194.3
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||+||+|.+..+++.||||++.... ....+..|..++..+.+|++|..+..+.......|+||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999999999999999876431 23346788899988877778888877778888999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~----- 151 (318)
T cd05570 81 GDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGV----- 151 (318)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCC-----
Confidence 899888874 4579999999999999999999999999999999999999 4778999999999875322211
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
.....+||..|+|||++.+..++.++|||||||++|+|++|+.||.+.. ....+..+..... .+...++.
T Consensus 152 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~---~~~~~~~i~~~~~-----~~~~~~~~ 221 (318)
T cd05570 152 --TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD---EDELFQSILEDEV-----RYPRWLSK 221 (318)
T ss_pred --cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC---HHHHHHHHHcCCC-----CCCCcCCH
Confidence 1234579999999999999999999999999999999999999997643 3333343333222 12356789
Q ss_pred HHHHHHHHHhcCCCCCCCCH
Q 011945 247 EFASYFHYCRSLRFDDKPDY 266 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~ 266 (474)
++.+||..||..||++||++
T Consensus 222 ~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred HHHHHHHHHccCCHHHcCCC
Confidence 99999999999999999998
No 104
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.9e-40 Score=338.26 Aligned_cols=258 Identities=22% Similarity=0.288 Sum_probs=204.8
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCC-----CeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
.++|.++++||+|+||.||+|.+... +..||||++..... ...+.+|+++++.+..|++|..+..++.....
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 45788999999999999999987433 35799998865432 24588999999999866777777777777888
Q ss_pred EEEEEecC-CCCHHHHHHHcC-----------------------------------------------------------
Q 011945 78 NVLVIDLL-GPSLEDLFNFCS----------------------------------------------------------- 97 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~----------------------------------------------------------- 97 (474)
.+|||||+ +++|.+++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 99999999 889998875321
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC
Q 011945 98 ------------------------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 98 ------------------------------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~ 141 (474)
..+++..++.++.||+.||.|||+++|+||||||+|||++ .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~---~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA---Q 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe---C
Confidence 2478888999999999999999999999999999999995 6
Q ss_pred CCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCc
Q 011945 142 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGT 220 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~ 220 (474)
++.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNY-----VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred CCEEEEEeCCcceeccccccc-----cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 788999999999866443221 11233457789999999999899999999999999999997 999997653321
Q ss_pred HHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 221 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
..+..+.... . ......+|.++.+++.+||..||++||++.+|.++|+.++
T Consensus 348 --~~~~~~~~~~-~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 348 --TFYNKIKSGY-R---MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred --HHHHHHhcCC-C---CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1122222211 1 1123467899999999999999999999999999999876
No 105
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.8e-40 Score=318.63 Aligned_cols=255 Identities=21% Similarity=0.352 Sum_probs=205.9
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
...|.+.++||.|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|.+++..+. +.......+++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-~~~~~~~~~lv~e~ 83 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG-VCTREPPFYIITEF 83 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEE-EEcCCCCcEEEEEe
Confidence 4569999999999999999999999999999998765432 346889999999998766555554 45566678899998
Q ss_pred C-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 85 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 85 ~-g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.........
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCcEEeCCCccccccccceee
Confidence 8 889999987543 4589999999999999999999999999999999999994 7789999999999876543221
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... ...+..+.... .....
T Consensus 161 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~~~~~~~~~----~~~~~ 227 (263)
T cd05052 161 ------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYELLEKGY----RMERP 227 (263)
T ss_pred ------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHCCC----CCCCC
Confidence 1122345678999999999999999999999999999998 9999976432 22233332211 11234
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
..+|.++.+++.+||..+|++||++.++.+.|+.+|
T Consensus 228 ~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 228 EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 678999999999999999999999999999998764
No 106
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.9e-40 Score=322.18 Aligned_cols=243 Identities=21% Similarity=0.196 Sum_probs=196.2
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeE---eCCEEEEEEec
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGV---EGDYNVLVIDL 84 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~---~~~~~~lv~e~ 84 (474)
..||+|++|.||+|.+ +|+.||||.+..... .+.+.+|+.++++++|++++..+..+.. ...+.+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6789999999999985 789999998765432 2456799999999998765555544433 24578999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 85 ~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
+ +++|.+++.. ...+++...+.++.|++.||.|||+ .+++||||||+|||++ .++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~---~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 104 CTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT---ENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC---CCCcEEEcccchHhhhcccc--
Confidence 9 8899999974 4579999999999999999999998 5999999999999994 77899999999998654322
Q ss_pred cccccccCCCCccCccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~--~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
....||..|+|||++.+ ..++.++|||||||++|||++|+.||.+... .+.+..+....... .+
T Consensus 178 --------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~---~~~~~~i~~~~~~~---~~ 243 (283)
T PHA02988 178 --------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT---KEIYDLIINKNNSL---KL 243 (283)
T ss_pred --------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcCCCC---CC
Confidence 12468899999999976 6799999999999999999999999987542 33334433222221 12
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
...+|+++.+++.+||+.||++||++.+|++.|+.+.
T Consensus 244 ~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 244 PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 3467899999999999999999999999999998764
No 107
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2e-40 Score=337.38 Aligned_cols=271 Identities=19% Similarity=0.273 Sum_probs=205.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++++.||+|+||.||+|.+..+++.||||++... .....+..|+.++..++|++ +..+...+..+...++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW-VVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC-EeeEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999987642 22345778999999998655 44555556677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ |++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 80 MEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred EeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCccccccc
Confidence 9999 8899999874 4579999999999999999999999999999999999999 478899999999997653321
Q ss_pred Cccc----------------------------cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 011945 161 THQH----------------------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212 (474)
Q Consensus 161 ~~~~----------------------------~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~P 212 (474)
.... .........+||+.|+|||++.+..++.++|||||||+||||++|..|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 1000 000011245799999999999999999999999999999999999999
Q ss_pred CCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccc
Q 011945 213 WQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTI 292 (474)
Q Consensus 213 f~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~ 292 (474)
|.+... ...+.++.........+. ...+++++.++|.+|+ .||.+|++...+.+++.+ ++...++|..
T Consensus 236 f~~~~~---~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h-------p~f~~~~~~~ 303 (360)
T cd05627 236 FCSETP---QETYRKVMNWKETLVFPP-EVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH-------PFFEGVDWGH 303 (360)
T ss_pred CCCCCH---HHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC-------CCCCCCCHHH
Confidence 987443 333344332111111110 1236789999999977 499999975444444443 4455678887
Q ss_pred cc
Q 011945 293 LK 294 (474)
Q Consensus 293 ~~ 294 (474)
..
T Consensus 304 ~~ 305 (360)
T cd05627 304 IR 305 (360)
T ss_pred Hh
Confidence 54
No 108
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.6e-40 Score=336.97 Aligned_cols=248 Identities=21% Similarity=0.280 Sum_probs=197.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.++|++.++||+|+||.||+|++..+++.||||++... .....+..|+.+++.++|++ |..+..+...+...++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~-iv~~~~~~~~~~~~~l 120 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEW-IVQLHYAFQDDKYLYM 120 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCC-cceEEEEEecCCEEEE
Confidence 46799999999999999999999999999999987542 12234678999999998555 4555556677888999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
||||+ |++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 121 VMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCC
Confidence 99999 8899999873 468999999999999999999999999999999999999 47889999999999865432
Q ss_pred CCccccccccCCCCccCccccccccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGI----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~----~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
... ......||+.|+|||++.+. .++.++|||||||+||||++|..||.+.. ....+.++.......
T Consensus 196 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~---~~~~~~~i~~~~~~~ 266 (370)
T cd05596 196 GMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS---LVGTYSKIMDHKNSL 266 (370)
T ss_pred Ccc------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC---HHHHHHHHHcCCCcC
Confidence 211 12345799999999998754 37899999999999999999999998743 234445544322111
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCC--CCCHHHH
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYL 269 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l 269 (474)
..+. ...++.++.++|..||..+|++ |++++++
T Consensus 267 ~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~el 301 (370)
T cd05596 267 TFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEI 301 (370)
T ss_pred CCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHH
Confidence 1111 1247899999999999999987 9997766
No 109
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.8e-40 Score=332.94 Aligned_cols=238 Identities=20% Similarity=0.275 Sum_probs=191.1
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|.+..+++.||||++.... ....+..|+++++.+.|+ +|..+..++......|+||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp-~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC-CCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999876431 123467788899888755 5555556667778899999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
++|.+++.. ...+++..++.++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~---- 151 (325)
T cd05594 80 GELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGA---- 151 (325)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCc----
Confidence 889888763 4579999999999999999999997 899999999999999 4778999999999875432221
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCc
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 245 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 245 (474)
......||+.|+|||++.+..++.++|||||||+||||++|..||.+... ...+..+..... .+...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---~~~~~~i~~~~~-----~~p~~~~ 220 (325)
T cd05594 152 ---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEI-----RFPRTLS 220 (325)
T ss_pred ---ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH---HHHHHHHhcCCC-----CCCCCCC
Confidence 11345799999999999999999999999999999999999999976432 223333322221 1235678
Q ss_pred HHHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011945 246 TEFASYFHYCRSLRFDDKP-----DYAYLK 270 (474)
Q Consensus 246 ~~l~~li~~cl~~dp~~RP-----t~~~l~ 270 (474)
+++.++|..||+.||++|+ ++.+++
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il 250 (325)
T cd05594 221 PEAKSLLSGLLKKDPKQRLGGGPDDAKEIM 250 (325)
T ss_pred HHHHHHHHHHhhcCHHHhCCCCCCCHHHHh
Confidence 9999999999999999997 666553
No 110
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.5e-39 Score=324.53 Aligned_cols=256 Identities=18% Similarity=0.224 Sum_probs=192.9
Q ss_pred eeeeeecCceEEEEEEEc--CCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeE-eCCEEEEEEecCCCC
Q 011945 12 GRKIGSGSFGEIYLGTNI--QTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYNVLVIDLLGPS 88 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~--~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~-~~~~~~lv~e~~g~s 88 (474)
.++||+|+||+||+|.++ .+++.||+|.+........+.+|+.+++.++|++++..+..+.. .+...+++|||++++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~ 85 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHD 85 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCC
Confidence 468999999999999965 46789999998766666678999999999998887777666543 456789999999999
Q ss_pred HHHHHHHcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeC-CCCCeEEEEecCCccccccC
Q 011945 89 LEDLFNFCS--------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 89 L~~li~~~~--------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~~ 159 (474)
|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+++.+...
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~ 165 (317)
T cd07868 86 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165 (317)
T ss_pred HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCC
Confidence 999886331 248999999999999999999999999999999999999532 35578999999999876443
Q ss_pred CCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCc------HHHHHHHHhhcc
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKYEKISEKK 232 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~------~~~~~~~i~~~~ 232 (474)
.. +........||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....+..+....
T Consensus 166 ~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 166 LK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred Cc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 21 11122456889999999999874 58999999999999999999999997533210 011111111000
Q ss_pred -------------cc--------------------chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 -------------VS--------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 -------------~~--------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.. ...+......+.++.+||..||..||++|||++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 0000001123467889999999999999999888753
No 111
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.6e-40 Score=336.73 Aligned_cols=255 Identities=15% Similarity=0.180 Sum_probs=199.7
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEc--CCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNI--QTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~--~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
.+..+|+++++||.|+||.||+|... .+++.||||.+... ..+.+|+++++.|+|++++..+. +.......|++
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~~iv~~~~-~~~~~~~~~lv 164 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISHRAIINLIH-AYRWKSTVCMV 164 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCCCCccceee-eEeeCCEEEEE
Confidence 34568999999999999999999754 35678999987543 34678999999999766665554 44566788999
Q ss_pred EecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 82 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 82 ~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|++++++|.+++. ....+++..++.|+.||+.||.|||++|||||||||+|||+ +..+.+||+|||++..+.....
T Consensus 165 ~e~~~~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 165 MPKYKCDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred ehhcCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCccccccCcccc
Confidence 9999999999985 45679999999999999999999999999999999999999 4778999999999986654322
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc-------
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS------- 234 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------- 234 (474)
. .......||+.|+|||++.+..++.++|||||||+||||++|..||.+.........+..+......
T Consensus 241 ~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 241 T-----PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred c-----ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 1 1123467999999999999999999999999999999999999999876544333333322211000
Q ss_pred --------------------chHHHH--hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 235 --------------------TSIEAL--CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 235 --------------------~~~~~l--~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
...+.. ...++.++.++|.+||..||++||++.+++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000 1245678999999999999999999887743
No 112
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.2e-40 Score=335.28 Aligned_cols=257 Identities=19% Similarity=0.245 Sum_probs=197.8
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeC----CEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEG----DYNV 79 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~----~~~~ 79 (474)
+|+++++||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|++++..+..+.... ...|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4789999999999999999999999999999875432 2245788999999999777666665544332 2689
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 80 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 80 lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
++|||++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 81 lv~e~~~~~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQSDLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccccCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeecccC
Confidence 999999999998886 35579999999999999999999999999999999999999 47789999999999865432
Q ss_pred CCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc-------
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK------- 231 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~------- 231 (474)
... ......+|..|+|||++.+. .++.++|||||||++|||++|+.||.+.........+......
T Consensus 157 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 157 ESK------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred ccc------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 211 11234688999999999875 4799999999999999999999999875443222222111100
Q ss_pred -------------c-ccchHH---HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 232 -------------K-VSTSIE---ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 232 -------------~-~~~~~~---~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
. ...... .+....++++.+||.+||..||++||++.++ |.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~---l~hp~ 290 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADA---LAHPY 290 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHH---hcCHh
Confidence 0 000011 1223457899999999999999999998766 44444
No 113
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5e-40 Score=317.65 Aligned_cols=247 Identities=21% Similarity=0.316 Sum_probs=202.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
.+|++.+.||+|+||.||++.. .+..||+|.+......+.+..|+.+++.++|.+.+..+..+...+...+++|||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 5799999999999999999985 4788999998766666678999999999997777776665556667789999999
Q ss_pred CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 g~sL~~li~~~~~-~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++..... .+++..++.++.||+.||+|||++||+||||||+||+++ +++.+||+|||++.......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~---- 156 (256)
T cd05082 84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQ---- 156 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCCcEEecCCccceeccccC----
Confidence 7899999875433 489999999999999999999999999999999999994 77899999999987654322
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+.... . ......
T Consensus 157 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~~~-~---~~~~~~ 223 (256)
T cd05082 157 ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEKGY-K---MDAPDG 223 (256)
T ss_pred ------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhcCC-C---CCCCCC
Confidence 12345678999999999889999999999999999997 9999976432 22222222211 1 123356
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
+|+.+.+++.+||..+|++||++.++.+.|++
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 224 CPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 88999999999999999999999999988875
No 114
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.6e-40 Score=336.81 Aligned_cols=270 Identities=21% Similarity=0.251 Sum_probs=200.6
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
.+|+++++||+|+||+||+|++..+++.||||++.... ....+..|+.+++.+.|++ |..+...+..+...|+|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~-iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW-VVRLYYSFQDKDNLYFV 79 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCc-CCeEEEEEEeCCEEEEE
Confidence 36999999999999999999999999999999876432 2235788999999998655 55555556677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 80 MDYIPGGDMMSLLIR-MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccccccc
Confidence 9999 8899999874 3578999999999999999999999999999999999999 478899999999986432110
Q ss_pred Cccc----------------------------------------cccccCCCCccCccccccccccCCCCCchhhHHHHH
Q 011945 161 THQH----------------------------------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLG 200 (474)
Q Consensus 161 ~~~~----------------------------------------~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlG 200 (474)
.... .........+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0000 000011235799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 201 YVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 201 vil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
|+||||++|+.||.+... .+...++.........+ ....+++++.++|.+|+ .+|++|++...+.+++++
T Consensus 236 vil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p-~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h----- 305 (382)
T cd05625 236 VILYEMLVGQPPFLAQTP---LETQMKVINWQTSLHIP-PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH----- 305 (382)
T ss_pred HHHHHHHhCCCCCCCCCH---HHHHHHHHccCCCcCCC-CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC-----
Confidence 999999999999987433 22222322211111111 11356889999998876 599999973323333433
Q ss_pred CCCCCCccccccc
Q 011945 281 GFQFDYVFDWTIL 293 (474)
Q Consensus 281 ~~~~~~~~dw~~~ 293 (474)
++...++|...
T Consensus 306 --p~f~~~~~~~~ 316 (382)
T cd05625 306 --PFFKTIDFSSD 316 (382)
T ss_pred --CCcCCcChHHH
Confidence 23334566653
No 115
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.7e-40 Score=331.99 Aligned_cols=256 Identities=21% Similarity=0.315 Sum_probs=201.4
Q ss_pred eeeeeecCceEEEEEEEc---CCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 12 GRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
++.||+|+||.||++.+. .+++.||||++.... ....+..|+++++.++|++++. +..++..+...|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVK-LHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCccc-EEEEEEcCCEEEEEEcC
Confidence 367999999999999863 578999999876432 2234678999999998665554 55556677788999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 85 ~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~-- 153 (318)
T cd05582 80 LRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEK-- 153 (318)
T ss_pred CCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCCCC--
Confidence 9 7899998863 4569999999999999999999999999999999999999 4778999999999976543321
Q ss_pred ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. ....+..+...... +...
T Consensus 154 -----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~---~~~~~~~i~~~~~~-----~p~~ 220 (318)
T cd05582 154 -----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD---RKETMTMILKAKLG-----MPQF 220 (318)
T ss_pred -----ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC---HHHHHHHHHcCCCC-----CCCC
Confidence 1234579999999999999889999999999999999999999997643 33344444333221 2356
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHH--HHHHHHHHHHHcCCCCCCcccccccc
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAY--LKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~--l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
+++++.++|..||+.||++||++.+ +.+++.+. +...++|....
T Consensus 221 ~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~-------~~~~~~~~~~~ 266 (318)
T cd05582 221 LSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHP-------FFSTIDWNKLY 266 (318)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCC-------CcCCCCHHHHH
Confidence 7899999999999999999999776 55555433 33345676543
No 116
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-41 Score=339.16 Aligned_cols=238 Identities=19% Similarity=0.331 Sum_probs=197.4
Q ss_pred EeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCCH
Q 011945 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSL 89 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL 89 (474)
-++.||+|+.|.||+|+ -.++.||||.++. .-..+++-|++|+|.|+| .+.+++.....+||+|||| .|-|
T Consensus 128 ELeWlGSGaQGAVF~Gr--l~netVAVKKV~e-----lkETdIKHLRkLkH~NII-~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGR--LHNETVAVKKVRE-----LKETDIKHLRKLKHPNII-TFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhccCcccceeeee--ccCceehhHHHhh-----hhhhhHHHHHhccCccee-eEeeeecCCceeEEeeeccccccH
Confidence 35789999999999998 5688999997542 234578889999966555 5556677788899999999 8899
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccccccc
Q 011945 90 EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 169 (474)
Q Consensus 90 ~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 169 (474)
+.+++ ..+++.......|..+|+.||.|||.+.|||||||.-||||+ .+..|||+|||.++...+..+.
T Consensus 200 ~~VLk-a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STk------- 268 (904)
T KOG4721|consen 200 YEVLK-AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTK------- 268 (904)
T ss_pred HHHHh-ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhhh-------
Confidence 99998 467899999999999999999999999999999999999996 6778999999999988776442
Q ss_pred CCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHH
Q 011945 170 NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFA 249 (474)
Q Consensus 170 ~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~ 249 (474)
..|+||..|||||++.+.+.+.|+|||||||||||||||..||.+.... ..+..+....+.- ..+..||+.|+
T Consensus 269 -MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss---AIIwGVGsNsL~L---pvPstcP~Gfk 341 (904)
T KOG4721|consen 269 -MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS---AIIWGVGSNSLHL---PVPSTCPDGFK 341 (904)
T ss_pred -hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh---eeEEeccCCcccc---cCcccCchHHH
Confidence 3579999999999999999999999999999999999999999875432 1122222221111 23467899999
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 250 SYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 250 ~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
-||++||+-.|..||+|.+|+..|+
T Consensus 342 lL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 342 LLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred HHHHHHHhcCCCCCccHHHHHHHHh
Confidence 9999999999999999999876653
No 117
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.3e-39 Score=316.27 Aligned_cols=254 Identities=22% Similarity=0.358 Sum_probs=201.8
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
..++|++.++||+|+||.||+|.+..+ ..||||++..... ...+.+|+.+++.+.|.+++..+. +. .....+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~-~~-~~~~~~lv~e 80 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV-SEEPIYIVTE 80 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEE-EE-CCCCcEEEEE
Confidence 357899999999999999999998655 4699998875333 456889999999998666555444 33 3455789999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++... ...+++..++.++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++..+.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCceeecccccc
Confidence 98 77999999743 34589999999999999999999999999999999999994 678899999999976644321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. ......++..|+|||+..+..++.++|||||||++|||++ |..||.+... .+.+..+..... . ..
T Consensus 158 ~------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~---~~~~~~~~~~~~-~---~~ 224 (262)
T cd05071 158 T------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVLDQVERGYR-M---PC 224 (262)
T ss_pred c------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh---HHHHHHHhcCCC-C---CC
Confidence 1 1123456778999999998899999999999999999999 8999976533 223333322111 1 11
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
...+|..+.+++.+||+.+|++||++.++.+.|++.|
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 225 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 2457899999999999999999999999999999876
No 118
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7e-40 Score=321.15 Aligned_cols=259 Identities=20% Similarity=0.235 Sum_probs=197.3
Q ss_pred eeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
||+|+||.||++.+..+|+.||+|.+.... ....+..|+++++.++|++ |..+..+...+...+++|||+ |++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPF-IVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCc-EEEEEEEEecCCeEEEEEecCCCCC
Confidence 799999999999999999999999875322 2234567999999997554 555555566778899999999 889
Q ss_pred HHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccccc
Q 011945 89 LEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 167 (474)
Q Consensus 89 L~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (474)
|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++ .++.++|+|||++........
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~~~~~~~~~~------ 150 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKT------ 150 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeeceeeeecCCCce------
Confidence 98887543 34589999999999999999999999999999999999994 678899999999986644221
Q ss_pred ccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH-HHHHHHHhhccccchHHHHhcCCcH
Q 011945 168 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 168 ~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
.....||..|+|||++.+..++.++|||||||++|||++|..||........ .+.......... ......+++
T Consensus 151 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 224 (277)
T cd05607 151 --ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV----KFEHQNFTE 224 (277)
T ss_pred --eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc----ccccccCCH
Confidence 1234689999999999998999999999999999999999999976543211 122222211111 111246789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccc
Q 011945 247 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 295 (474)
++.+++.+||+.||++||++.++. ++++. .++...++|.....
T Consensus 225 ~~~~li~~~L~~~P~~R~~~~~~~---~~~~~---h~~f~~~~~~~~~~ 267 (277)
T cd05607 225 ESKDICRLFLAKKPEDRLGSREKN---DDPRK---HEFFKTINFPRLEA 267 (277)
T ss_pred HHHHHHHHHhccCHhhCCCCccch---hhhhc---ChhhcCCCHHHHhc
Confidence 999999999999999999987653 22221 23334467765443
No 119
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-39 Score=343.51 Aligned_cols=249 Identities=18% Similarity=0.194 Sum_probs=200.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCC-CeEEEEEEeccCCCc--hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQT-NEEVAIKLENVKTKH--PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~~~vAvK~~~~~~~~--~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
..|.+.+.||.|+||.||+|.+..+ ++.||+|.+...... ..+..|+.+++.++|++++ .+..++..+...|||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv-~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIV-KHFDDFKSDDKLLLIME 145 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEe-EEEEEEEECCEEEEEEE
Confidence 4599999999999999999998877 788999976543322 3467899999999865554 45555667788999999
Q ss_pred cC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 84 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 84 ~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++.+...
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCcEEEEeCcCceecCCc
Confidence 99 89999887532 34689999999999999999999999999999999999994 7789999999999876543
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
... ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+...... .
T Consensus 223 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~---~~~~~~~~~~~~~~----~ 290 (478)
T PTZ00267 223 VSL-----DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS---QREIMQQVLYGKYD----P 290 (478)
T ss_pred ccc-----ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCCC----C
Confidence 211 11245679999999999999999999999999999999999999997643 23333443332221 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
+...++.++.++|..||..||++||++.+++.
T Consensus 291 ~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 23467899999999999999999999988753
No 120
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.1e-39 Score=325.74 Aligned_cols=258 Identities=21% Similarity=0.276 Sum_probs=201.2
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCe----EEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
-..+|++.+.||+|+||.||+|.+..+++ .||||+++.... ...+..|+.+++.+.|++++..+. ++....
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g-~~~~~~- 82 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLTST- 82 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEE-EEcCCC-
Confidence 35679999999999999999999876665 489998764332 345788999999998776666554 444443
Q ss_pred EEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 78 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
.+++++|+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.+
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---CCCcEEEccccccccc
Confidence 45666666 8999999986666799999999999999999999999999999999999994 6788999999999876
Q ss_pred ccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+.... + +..+.......
T Consensus 160 ~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---~-~~~~~~~~~~~ 230 (316)
T cd05108 160 GADEKEY-----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---E-ISSILEKGERL 230 (316)
T ss_pred cCCCcce-----eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---H-HHHHHhCCCCC
Confidence 5432211 0122345678999999999999999999999999999997 99999875332 2 22222222111
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
.....++.++.+++..||..+|++||++.+++..|.++...
T Consensus 231 ---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 231 ---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred ---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 11245778999999999999999999999999998888643
No 121
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.8e-39 Score=321.26 Aligned_cols=257 Identities=20% Similarity=0.280 Sum_probs=204.0
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCe--EEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE--EVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~--~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.+.||+|+||.||+|.+..++. .+++|.++.... ...+..|+.++.++.+|+++..+..+.......+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 579999999999999999999877764 468887653222 245788999999996667777777777777788999
Q ss_pred EecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeE
Q 011945 82 IDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 145 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~---------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~v 145 (474)
|||+ +++|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||++ .++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---ENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---CCCeE
Confidence 9998 789999986422 2488999999999999999999999999999999999994 67889
Q ss_pred EEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHH
Q 011945 146 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQK 224 (474)
Q Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 224 (474)
||+|||++........ ......+..|+|||++.+..++.++|||||||++|||++ |..||.+... ...
T Consensus 159 kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---~~~ 227 (297)
T cd05089 159 KIADFGLSRGEEVYVK--------KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---AEL 227 (297)
T ss_pred EECCcCCCccccceec--------cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHH
Confidence 9999999864322111 111233567999999999889999999999999999997 9999977543 222
Q ss_pred HHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 225 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 225 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
+..+..... ......++.++.+|+.+||..+|.+||+++++.+.|..++....
T Consensus 228 ~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 228 YEKLPQGYR----MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred HHHHhcCCC----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 333322111 11234678999999999999999999999999999999987654
No 122
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1e-39 Score=330.07 Aligned_cols=260 Identities=20% Similarity=0.301 Sum_probs=202.5
Q ss_pred CCcEEEeeeeeecCceEEEEEEE-----cCCCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCcee-EEEeEeCC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTN-----IQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNL-RWFGVEGD 76 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~-----~~~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l-~~~~~~~~ 76 (474)
.++|++.+.||.|+||.||+|.+ ..+++.||||++...... ..+.+|+.++..+.+|++|..+ ..+...+.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 46899999999999999999985 346789999998754332 3477899999999766555555 44555667
Q ss_pred EEEEEEecC-CCCHHHHHHHcC----------------------------------------------------------
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCS---------------------------------------------------------- 97 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~---------------------------------------------------------- 97 (474)
..+++|||+ +++|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 789999999 889999986421
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccccccc
Q 011945 98 --------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 169 (474)
Q Consensus 98 --------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 169 (474)
..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~-----~~ 237 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDY-----VR 237 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcch-----hh
Confidence 2367888999999999999999999999999999999994 6789999999999865432211 11
Q ss_pred CCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHH
Q 011945 170 NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 248 (474)
Q Consensus 170 ~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 248 (474)
.....++..|+|||++.+..++.++|||||||++|+|++ |..||....... .....+..... ......+++++
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~ 311 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGTR----MRAPDYTTPEM 311 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--HHHHHHhccCC----CCCCCCCCHHH
Confidence 123356778999999999899999999999999999997 999997653321 11222211111 11123467899
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 249 ASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 249 ~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
.+++..||..||++||++.+|++.|+.+++.
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999854
No 123
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-39 Score=322.24 Aligned_cols=261 Identities=19% Similarity=0.308 Sum_probs=206.5
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcC-------CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-------TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEG 75 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-------~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~ 75 (474)
.++|.+.+.||+|+||.||+|.+.. +...||+|++..... ...+..|+.+++.+..|+++..+..++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3789999999999999999998643 235799998875432 235778999999996567777777777777
Q ss_pred CEEEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeC
Q 011945 76 DYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 139 (474)
Q Consensus 76 ~~~~lv~e~~-g~sL~~li~~~~---------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~ 139 (474)
...+++|||+ +++|.+++.... ..+++.+++.++.||+.||+|||++||+||||||+|||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~-- 174 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-- 174 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc--
Confidence 8899999999 789999997532 2488999999999999999999999999999999999994
Q ss_pred CCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCc
Q 011945 140 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA 218 (474)
Q Consensus 140 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~ 218 (474)
.++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 175 -~~~~~kL~dfg~a~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 175 -EDNVMKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred -CCCcEEECCCcccccccccchhh-----ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 67899999999997654322111 0112234578999999999889999999999999999998 8999976432
Q ss_pred CcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 219 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
.+....+..... ......++.++.+++..||..+|++||++.++++.|++++....
T Consensus 249 ---~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 249 ---EELFKLLKEGHR----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred ---HHHHHHHHcCCC----CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 222222222211 12334678999999999999999999999999999999987654
No 124
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.1e-39 Score=320.08 Aligned_cols=255 Identities=18% Similarity=0.250 Sum_probs=199.4
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.++|++.++||.|+||.||+|.+..+++.||+|.+.... ....+..|+.+++.++|++++. +..+.......+++|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~-~~~~~~~~~~~~lv~ 83 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT-LHDIIHTEKSLTLVF 83 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcce-EEEEEecCCeEEEEE
Confidence 467999999999999999999999999999999876432 2235778999999998665554 445556777899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||+.++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||+ +.++.+||+|||++........
T Consensus 84 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~- 159 (301)
T cd07873 84 EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTK- 159 (301)
T ss_pred eccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCCCCC-
Confidence 999999999988666779999999999999999999999999999999999999 4678999999999975433221
Q ss_pred cccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc--------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 233 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 233 (474)
......++..|+|||++.+. .++.++|||||||++|||++|+.||...........+..+.....
T Consensus 160 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 160 ------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred ------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhh
Confidence 11234678999999998764 478999999999999999999999987543222211111110000
Q ss_pred --------------cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 234 --------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 234 --------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..........+++++.+||.+||..||.+||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00111223457889999999999999999999877643
No 125
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-39 Score=327.42 Aligned_cols=235 Identities=21% Similarity=0.269 Sum_probs=186.8
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHH-HHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKL-YKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~i-l~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
+.||+|+||+||+|.+..+|+.||||++.... ....+..|..+ ++.+.| ++|..+..+....+..+++|||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-p~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKH-PFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCC-CCCccEEEEEecCCEEEEEEcCCC
Confidence 46999999999999999999999999876431 12334555554 455665 45555556667778899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
+++|..++. ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~---- 151 (325)
T cd05604 80 GGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSD---- 151 (325)
T ss_pred CCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCC----
Confidence 788988876 35679999999999999999999999999999999999999 4778999999999875332211
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCc
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 245 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 245 (474)
......||..|+|||++.+..++.++|||||||++|||++|..||.... ..+.+..+..... .+...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~---~~~~~~~~~~~~~-----~~~~~~~ 220 (325)
T cd05604 152 ---TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD---VAEMYDNILHKPL-----VLRPGAS 220 (325)
T ss_pred ---CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC---HHHHHHHHHcCCc-----cCCCCCC
Confidence 1234579999999999999999999999999999999999999998643 3333444433221 1234678
Q ss_pred HHHHHHHHHHhcCCCCCCCCHH
Q 011945 246 TEFASYFHYCRSLRFDDKPDYA 267 (474)
Q Consensus 246 ~~l~~li~~cl~~dp~~RPt~~ 267 (474)
.++.++|..||..+|.+||++.
T Consensus 221 ~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 221 LTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred HHHHHHHHHHhccCHHhcCCCC
Confidence 8999999999999999999874
No 126
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-39 Score=320.96 Aligned_cols=288 Identities=43% Similarity=0.701 Sum_probs=241.7
Q ss_pred ccCC-cEEEeeeeeecCceEEEEEEEcCCC-eEEEEEEeccCCC--chHHHHHHHHHHHhc---CCCCCceeEEEe-EeC
Q 011945 4 RVGN-KFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKLENVKTK--HPQLQYEAKLYKILQ---GGTGIPNLRWFG-VEG 75 (474)
Q Consensus 4 ~i~~-~y~i~~~LG~G~fG~Vy~a~~~~~~-~~vAvK~~~~~~~--~~~l~~E~~il~~l~---~~~~i~~l~~~~-~~~ 75 (474)
.... +|++.++||+|+||.||+|.+..++ ..+|+|++..... ...+..|..++..+. +..+++.+...+ ..+
T Consensus 14 ~~~~~~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~ 93 (322)
T KOG1164|consen 14 DKVNTRYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE 93 (322)
T ss_pred cccccceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCC
Confidence 3345 8999999999999999999987764 6899998776433 237999999999998 467899998888 588
Q ss_pred CEEEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCC--CCCeEEEEecCC
Q 011945 76 DYNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGL 152 (474)
Q Consensus 76 ~~~~lv~e~~g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~--~~~~vkL~DFGl 152 (474)
.+.+|||+++|.+|.++..... +.|+..+++.|+.|++.+|++||+.|+|||||||+|++++... ....++|.|||+
T Consensus 94 ~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 94 DFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred ceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 8999999999999999996554 7899999999999999999999999999999999999998543 226799999999
Q ss_pred cc--ccccCCCcccccccc-CCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHh
Q 011945 153 AK--RYRDTATHQHIPYRE-NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 229 (474)
Q Consensus 153 a~--~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~ 229 (474)
|+ .+.......+.+.+. ...+.||.+|++++++.+.+.++++|+|||++++.||+.|.+||.+.........+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 99 443333222344444 346779999999999999999999999999999999999999998877665555555554
Q ss_pred hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 230 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
....... ++...|.++.+++..+-..++.++|++..+..+|.+.+.+.+.....++||....
T Consensus 254 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~~~ 315 (322)
T KOG1164|consen 254 RKLLTDR---FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEVKL 315 (322)
T ss_pred hhhcccc---ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcccccc
Confidence 4443332 4456788999999999999999999999999999999999999999999999754
No 127
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.1e-41 Score=324.50 Aligned_cols=252 Identities=22% Similarity=0.348 Sum_probs=212.1
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc-----hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
+..+|++.+.||+|.||.|-+|.....|+.||||.+..+... -.+.+|++||..|+|+++|.++. ++...+..+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyE-VFENkdKIv 129 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYE-VFENKDKIV 129 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhh-hhcCCceEE
Confidence 346899999999999999999999899999999987655332 24789999999999776666554 455667789
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
|||||. +|.|+|++..+ +.+++.++..++.||+.|+.|+|.++++|||||.+|||+ +.++++||+||||+..+.+
T Consensus 130 ivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhcc
Confidence 999999 99999999854 579999999999999999999999999999999999999 5889999999999998876
Q ss_pred CCCccccccccCCCCccCccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
... ..++||++.|++||++.|.+| ++.+|-|||||+||-|+.|.+||.+. +.+..+.+|.......
T Consensus 206 ~kf--------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~---Dhk~lvrQIs~GaYrE-- 272 (668)
T KOG0611|consen 206 KKF--------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR---DHKRLVRQISRGAYRE-- 272 (668)
T ss_pred ccH--------HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc---hHHHHHHHhhcccccC--
Confidence 543 357899999999999999997 68999999999999999999999984 4455566665544432
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
..-|....-||..||..+|++|.|+++|. .+.+.+.|
T Consensus 273 ----P~~PSdA~gLIRwmLmVNP~RRATieDiA---sHWWvNwg 309 (668)
T KOG0611|consen 273 ----PETPSDASGLIRWMLMVNPERRATIEDIA---SHWWVNWG 309 (668)
T ss_pred ----CCCCchHHHHHHHHHhcCcccchhHHHHh---hhheeecc
Confidence 34577889999999999999999977764 34444444
No 128
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.2e-39 Score=326.96 Aligned_cols=239 Identities=20% Similarity=0.267 Sum_probs=191.0
Q ss_pred eeeeeecCceEEEEEEEc---CCCeEEEEEEeccCC------CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 12 GRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~------~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+++||+|+||.||++++. .+++.||||++.... ....+..|+.+++.++|++++..+. ++..+...|++|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~-~~~~~~~~~lv~ 79 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIY-AFQTGGKLYLIL 79 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceee-EEecCCeEEEEE
Confidence 368999999999999864 468899999876421 2234678999999999766555554 455667889999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|.+++.. ...+.+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 80 EYLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred eCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCC
Confidence 998 7899998874 4568999999999999999999999999999999999999 4778999999999975433221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......||+.|+|||++.+..++.++|||||||+||||++|+.||.+... ...+..+..... .+.
T Consensus 156 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~---~~~~~~~~~~~~-----~~~ 220 (323)
T cd05584 156 -------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR---KKTIDKILKGKL-----NLP 220 (323)
T ss_pred -------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCC-----CCC
Confidence 12345799999999999998899999999999999999999999987432 333444433222 234
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKP-----DYAYLK 270 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RP-----t~~~l~ 270 (474)
..+++++.++|..||..||++|| ++++++
T Consensus 221 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~ 254 (323)
T cd05584 221 PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQ 254 (323)
T ss_pred CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHh
Confidence 56789999999999999999999 655553
No 129
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.9e-40 Score=319.64 Aligned_cols=253 Identities=23% Similarity=0.361 Sum_probs=201.8
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
.++|.+.+.||+|+||.||+|.+.. +++.||||++...... ..+.+|+++++.+.|.+ +..+..++.....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHEN-IVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCC-chheeeEEecCCC
Confidence 3579999999999999999998743 3578999988654333 46889999999998665 4455555666678
Q ss_pred EEEEEecC-CCCHHHHHHHcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCC
Q 011945 78 NVLVIDLL-GPSLEDLFNFCS-------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 143 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~-------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~ 143 (474)
.+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG---YDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc---CCC
Confidence 89999998 899999987432 3478999999999999999999999999999999999994 779
Q ss_pred eEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHH
Q 011945 144 QVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKK 222 (474)
Q Consensus 144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~ 222 (474)
.+||+|||++......... .......++..|+|||++.+..++.++|||||||++|||++ |..||.+... .
T Consensus 160 ~~kl~d~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~---~ 231 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN---E 231 (280)
T ss_pred eEEECCcccceecccCcce-----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH---H
Confidence 9999999999765332211 11223356789999999999999999999999999999998 9999976543 2
Q ss_pred HHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 223 QKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 223 ~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
..+..+...... .....++.++.+++..||..||++||++.++++.|+
T Consensus 232 ~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 EVIECITQGRLL----QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 333333322221 123467899999999999999999999999988875
No 130
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-38 Score=350.26 Aligned_cols=254 Identities=20% Similarity=0.298 Sum_probs=201.3
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeE-eCCE
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDY 77 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~-~~~~ 77 (474)
+...++|+++++||.|+||+||+|.+..+++.||+|++..... ...+..|+.+++.|.|++++..+..|.. ....
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 4556799999999999999999999999999999998765422 3458889999999998887777766543 4567
Q ss_pred EEEEEecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC-------CccccCCCCCcEEeeeC-------
Q 011945 78 NVLVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK-------SFLHRDIKPDNFLMGLG------- 139 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~-------gIiHrDIKP~NILl~~~------- 139 (474)
+||||||+ +++|.+++... ...+++..++.|+.||+.||.|||+. +||||||||+||||+.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999 78999998643 35699999999999999999999984 49999999999999632
Q ss_pred -------CCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccC--CCCCchhhHHHHHHHHHHHHhCC
Q 011945 140 -------RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGS 210 (474)
Q Consensus 140 -------~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--~~~s~ksDIwSlGvil~elltG~ 210 (474)
+....+||+|||++..+..... .....||+.|+|||++.+ ..++.++||||||||||||++|.
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--------~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESM--------AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccccc--------ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 1234699999999986543221 134579999999999865 34889999999999999999999
Q ss_pred CCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 211 LPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 211 ~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.||..... ..+.+..+.... .. ....++.++.+||..||..+|++||++.+++.
T Consensus 241 ~PF~~~~~--~~qli~~lk~~p-~l----pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 241 TPFHKANN--FSQLISELKRGP-DL----PIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCcCCc--HHHHHHHHhcCC-CC----CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 99976432 222332222211 11 12456899999999999999999999887753
No 131
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3e-39 Score=323.53 Aligned_cols=255 Identities=22% Similarity=0.276 Sum_probs=195.7
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHH-HHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAK-LYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~-il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
++||+|+||.||+|++..+++.||||++.... ....+..|.. +++.+.|++ |..+..++...+..++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~-iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPF-LVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCC-ccceeeEEEcCCEEEEEEcCCC
Confidence 47999999999999999999999999875432 1223455554 466676554 555556667778899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
+++|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+++.......
T Consensus 80 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~---- 151 (321)
T cd05603 80 GGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEE---- 151 (321)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCC----
Confidence 7899888763 4578999999999999999999999999999999999999 4778999999999875432221
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCc
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 245 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 245 (474)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+..... .+....+
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~i~~~~~-----~~~~~~~ 220 (321)
T cd05603 152 ---TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---VSQMYDNILHKPL-----QLPGGKT 220 (321)
T ss_pred ---ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC---HHHHHHHHhcCCC-----CCCCCCC
Confidence 1234579999999999999899999999999999999999999998743 3344444443322 1234678
Q ss_pred HHHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 246 TEFASYFHYCRSLRFDDKPDYA-YLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 246 ~~l~~li~~cl~~dp~~RPt~~-~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
.++.++|..||+.||.+||+.. ++.+++++ .+....+|....
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~-------~~~~~~~~~~~~ 263 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAKADFLEIKNH-------VFFSPINWDDLY 263 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCCCCHHHHhCC-------CCcCCCCHHHHh
Confidence 8999999999999999999853 33333332 333445676543
No 132
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.3e-39 Score=315.49 Aligned_cols=253 Identities=21% Similarity=0.363 Sum_probs=202.5
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
.++|+++++||+|+||.||+|.+ .++..||+|.+.... ..+.+..|+.+++.++|.+++. +..+.......+++||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVR-LYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCCcEEEEec
Confidence 46899999999999999999996 456789999876433 3456889999999998665554 44455667778999999
Q ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 85 L-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 85 ~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
+ +++|.+++... ...+++..++.++.||+.||.|||+++++||||||+||+++ ..+.+||+|||++.........
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCcEEECCCccceecCCCcee
Confidence 8 88999998643 45689999999999999999999999999999999999994 7789999999999876543211
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......++..|+|||++.+..++.++|||||||++|+|++ |..||...... .....+..... . ...
T Consensus 160 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~~~~~-~---~~~ 226 (261)
T cd05072 160 ------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS---DVMSALQRGYR-M---PRM 226 (261)
T ss_pred ------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH---HHHHHHHcCCC-C---CCC
Confidence 1123356778999999998889999999999999999998 99999764332 22233222211 1 122
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
..+|.++.+++.+||..+|++||+++++.++|+++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 227 ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 46789999999999999999999999999998763
No 133
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.9e-39 Score=317.67 Aligned_cols=256 Identities=20% Similarity=0.320 Sum_probs=200.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
.++|.+.+.||+|+||.||+|.+.. ++..||+|....... ...+..|+.+++.+.|.+ +..+..++.+...
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQN-IVRLIGVSFERLP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCC-EeeEEEEEccCCC
Confidence 5689999999999999999999876 778899998764332 235788999999998654 4455555556667
Q ss_pred EEEEEecC-CCCHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEec
Q 011945 78 NVLVIDLL-GPSLEDLFNFCS------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DF 150 (474)
.+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++.......+||+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 78999998 899999997543 24899999999999999999999999999999999999974434457999999
Q ss_pred CCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHh
Q 011945 151 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKIS 229 (474)
Q Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~ 229 (474)
|+++........ ........+..|+|||++.+..++.++|||||||++|||++ |..||.+... ...+..+.
T Consensus 164 g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~---~~~~~~~~ 235 (277)
T cd05036 164 GMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN---QEVMEFVT 235 (277)
T ss_pred ccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH
Confidence 999876332210 11122234578999999999899999999999999999997 9999986443 22222222
Q ss_pred hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 230 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
.... ......+|.++.+++.+||+.+|++||++.+|++.|.
T Consensus 236 ~~~~----~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 236 GGGR----LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred cCCc----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 2111 1123567899999999999999999999999988764
No 134
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=9.2e-40 Score=333.93 Aligned_cols=250 Identities=20% Similarity=0.265 Sum_probs=195.4
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
..++|++.++||+|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+.|++++ .+..+...+...|
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv-~~~~~~~~~~~~~ 119 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV-QLFCAFQDDKYLY 119 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEe-eEEEEEEcCCEEE
Confidence 3578999999999999999999999999999999875321 223477899999988865544 5555566778899
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+||||+ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +..+.+||+|||+|..+..
T Consensus 120 lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceeccc
Confidence 999999 8899999973 468999999999999999999999999999999999999 4778999999999987643
Q ss_pred CCCccccccccCCCCccCccccccccccCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~----~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
... .......||+.|+|||++.+.. ++.++|||||||+||||++|..||.+.. ....+..+......
T Consensus 195 ~~~------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~---~~~~~~~i~~~~~~ 265 (370)
T cd05621 195 TGM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS---LVGTYSKIMDHKNS 265 (370)
T ss_pred CCc------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCcc
Confidence 221 1123467999999999997643 7899999999999999999999998643 33444444432221
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCC--CCCHHHHH
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYLK 270 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l~ 270 (474)
...+. ...++..+.+++..||..++.+ |+++.+++
T Consensus 266 ~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l 302 (370)
T cd05621 266 LNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEIK 302 (370)
T ss_pred cCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHHh
Confidence 11111 1246889999999999855443 77866653
No 135
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.5e-39 Score=317.52 Aligned_cols=244 Identities=20% Similarity=0.267 Sum_probs=194.0
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.|++.+.||+|+||+||+|.+..+++.||+|++..... ...+..|+++++.++|++++. +.++...++..+++|
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~-~~~~~~~~~~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVN-LAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCcee-EEEEEecCCEEEEEE
Confidence 48889999999999999999999999999998764321 234678999999998665554 555556677889999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++ ..+.+||+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEecCCcceecCCCC
Confidence 988 78898887643 34699999999999999999999999999999999999994 67889999999997653321
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. .....|+..|+|||++.+..++.++|||||||++|||++|..||.+.......+.+. .. ........
T Consensus 157 ~--------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~---~~-~~~~~~~~ 224 (285)
T cd05632 157 S--------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVD---RR-VLETEEVY 224 (285)
T ss_pred c--------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---Hh-hhcccccc
Confidence 1 123578999999999999899999999999999999999999998654322111111 11 11111223
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYA 267 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~ 267 (474)
...++.++.+|+..||..||++||++.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 225 SAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred CccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 456789999999999999999999943
No 136
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.2e-39 Score=317.94 Aligned_cols=258 Identities=24% Similarity=0.337 Sum_probs=206.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEc-----CCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
.++|.+.+.||+|+||.||++.+. .++..||+|.+..... ...+..|+.+++.++|+ ++..+..++......
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~ 82 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE-HIVKFYGVCVEGDPL 82 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCC-CcceEEEEEecCCcc
Confidence 457999999999999999999852 3456799998764432 34588999999999865 555565666777889
Q ss_pred EEEEecC-CCCHHHHHHHcC------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeE
Q 011945 79 VLVIDLL-GPSLEDLFNFCS------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 145 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~v 145 (474)
+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ +++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~---~~~~~ 159 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLV 159 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---cCCcE
Confidence 9999998 789999987432 2489999999999999999999999999999999999994 77899
Q ss_pred EEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHH
Q 011945 146 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQK 224 (474)
Q Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 224 (474)
||+|||+++........ .......++..|+|||++.+..++.++|||||||++|+|++ |..||..... ...
T Consensus 160 kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---~~~ 231 (288)
T cd05093 160 KIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEV 231 (288)
T ss_pred EeccCCccccccCCcee-----ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHH
Confidence 99999999865432211 11123356789999999999889999999999999999998 9999976543 223
Q ss_pred HHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 225 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 225 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
+..+...... .....++.++.+|+.+||+.||.+||++.++.+.|+++...
T Consensus 232 ~~~i~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 232 IECITQGRVL----QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHcCCcC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 3333332221 22346789999999999999999999999999999998754
No 137
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2e-39 Score=317.24 Aligned_cols=255 Identities=20% Similarity=0.302 Sum_probs=199.8
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeC
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEG 75 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~ 75 (474)
+..++|++.+.||+|+||.||+|.+.. ++..||||++..... ...+.+|+.+++.+.|++++ .+..+...+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv-~~~~~~~~~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV-RLLGVVSQG 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCee-eEEEEEcCC
Confidence 457889999999999999999998642 356899998754322 23478899999999866554 455556677
Q ss_pred CEEEEEEecC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeE
Q 011945 76 DYNVLVIDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 145 (474)
Q Consensus 76 ~~~~lv~e~~-g~sL~~li~~~~---------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~v 145 (474)
...+++|||+ +++|.+++.... ..+++..++.++.|++.||.|||+.|++|+||||+|||++ .++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCCE
Confidence 7889999998 789999986432 2357888999999999999999999999999999999994 67889
Q ss_pred EEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHH
Q 011945 146 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQK 224 (474)
Q Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 224 (474)
+|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.+... ...
T Consensus 159 ~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~---~~~ 230 (277)
T cd05062 159 KIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN---EQV 230 (277)
T ss_pred EECCCCCccccCCccee-----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHH
Confidence 99999999765432221 11122356788999999999899999999999999999999 7999987543 222
Q ss_pred HHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 225 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 225 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
+..+..... ..+...++..+.+++.+||+.+|++||++.++++.|+
T Consensus 231 ~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 231 LRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHcCCc----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 332222221 1234567899999999999999999999999988765
No 138
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.1e-39 Score=312.08 Aligned_cols=249 Identities=20% Similarity=0.262 Sum_probs=199.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
++|++.+.||+|+||.||++.+. .+..||+|.+.... ....+..|+.+++.++|++++ .+..++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLV-QLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCce-eEEEEEccCCCEEEEEEcC
Confidence 57999999999999999999874 45689999876443 345788999999999865544 5555666777889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 -g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+++........
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~~~~~~~~~~-- 156 (256)
T cd05114 82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKVSDFGMTRYVLDDEYT-- 156 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEECCCCCccccCCCcee--
Confidence 7899999875555789999999999999999999999999999999999994 6789999999999865432221
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+.+..+...... .....
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~---~~~~~~i~~~~~~----~~~~~ 225 (256)
T cd05114 157 ----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN---YEVVEMISRGFRL----YRPKL 225 (256)
T ss_pred ----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHCCCCC----CCCCC
Confidence 1123346678999999998889999999999999999999 9999976432 3333333332211 11234
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
.+.++.+++.+||..+|++||++++|++.|
T Consensus 226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 226 ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 678999999999999999999999998765
No 139
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.6e-39 Score=311.81 Aligned_cols=255 Identities=25% Similarity=0.348 Sum_probs=203.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.++||+|+||.||+|++..+++.||||.+..... ...+..|+.+++.++|++++..+ .+.......+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYL-DSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeee-eeEEECCeEEEE
Confidence 689999999999999999999999999999997653221 23478899999999866655554 445566788999
Q ss_pred EecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 82 IDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++ .++.++|+|||++..+.
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECccccceecc
Confidence 9999 67999888632 34589999999999999999999999999999999999994 67889999999998765
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
..... .....|+..|+|||.+.+..++.++|||||||++|||++|..||..... ........+.......
T Consensus 158 ~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~-- 227 (267)
T cd08228 158 SKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLFSLCQKIEQCDYPP-- 227 (267)
T ss_pred chhHH-------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-cHHHHHHHHhcCCCCC--
Confidence 43211 1234688999999999988899999999999999999999999976432 2222233332222111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
.....++..+.+++.+||..+|++||++.++++.|+.+
T Consensus 228 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 228 -LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred -CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11235678999999999999999999999999988765
No 140
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.4e-39 Score=316.67 Aligned_cols=260 Identities=21% Similarity=0.267 Sum_probs=198.4
Q ss_pred CCcE-EEeeeeeecCceEEEEEEE----cCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeE-eCC
Q 011945 6 GNKF-RLGRKIGSGSFGEIYLGTN----IQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGD 76 (474)
Q Consensus 6 ~~~y-~i~~~LG~G~fG~Vy~a~~----~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~-~~~ 76 (474)
.++| ++.+.||+|+||+||++.. ..++..||+|++..... ...+.+|+++++.++|++++..+..+.. ...
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 3555 9999999999999988653 35678999998865432 3457889999999987666655554433 345
Q ss_pred EEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
..+++|||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~ 156 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKA 156 (283)
T ss_pred eEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEeecccccc
Confidence 688999998 8899999874 4699999999999999999999999999999999999994 678899999999987
Q ss_pred cccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHH-----------HH
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-----------QK 224 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~-----------~~ 224 (474)
+....... .......++..|+|||++.+..++.++|||||||++|||++|..||......-.. ..
T Consensus 157 ~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05080 157 VPEGHEYY----RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVR 232 (283)
T ss_pred cCCcchhh----ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhh
Confidence 65432211 1112234667899999999888999999999999999999999998653321000 00
Q ss_pred HHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 225 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 225 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
+......... ......+|.++.+++..||+.+|++||++++|++.|+++.
T Consensus 233 ~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 233 LIELLERGMR---LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhcCCC---CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0000000000 0113457899999999999999999999999999998763
No 141
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.4e-39 Score=327.21 Aligned_cols=234 Identities=21% Similarity=0.245 Sum_probs=186.6
Q ss_pred eeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhc--CCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~--~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
||+|+||+||+|++..+++.||||++.... ....+..|..++..+. ++++|..+..........++||||+ +
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999875421 1123455666766654 6777878877778888999999998 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++........
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a~~~~~~~~----- 151 (330)
T cd05586 81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDFGLSKANLTDNK----- 151 (330)
T ss_pred ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecCCcCcCCCCCCC-----
Confidence 899888873 56799999999999999999999999999999999999994 778999999999975432221
Q ss_pred cccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCc
Q 011945 167 YRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 245 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 245 (474)
.....+||..|+|||++.+. .++.++|||||||++|||++|..||.+.. ..+.+..+........ ...++
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~---~~~~~~~i~~~~~~~~----~~~~~ 222 (330)
T cd05586 152 --TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED---TQQMYRNIAFGKVRFP----KNVLS 222 (330)
T ss_pred --CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC---HHHHHHHHHcCCCCCC----CccCC
Confidence 12346799999999999765 48999999999999999999999997643 3334444433322111 12468
Q ss_pred HHHHHHHHHHhcCCCCCCCCH
Q 011945 246 TEFASYFHYCRSLRFDDKPDY 266 (474)
Q Consensus 246 ~~l~~li~~cl~~dp~~RPt~ 266 (474)
+++.++|..||..||++||++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCC
Confidence 899999999999999999954
No 142
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-39 Score=315.67 Aligned_cols=254 Identities=19% Similarity=0.278 Sum_probs=198.7
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
....++|++.++||+|+||.||+|++..+++.||+|++.... ....+..|+.+++.++|++++..+ .++..+...++
T Consensus 5 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~-~~~~~~~~~~i 83 (267)
T cd06646 5 RNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYF-GSYLSREKLWI 83 (267)
T ss_pred cCchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeee-EEEEeCCEEEE
Confidence 344567999999999999999999999999999999886543 233577899999999876666554 44566778899
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
+|||+ +++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..+...
T Consensus 84 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 84 CMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeeccc
Confidence 99999 6799998863 4578999999999999999999999999999999999999 46788999999999866432
Q ss_pred CCccccccccCCCCccCcccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
.. ......|+..|+|||.+. ...++.++|||||||++|||++|..||....... ....+........
T Consensus 160 ~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~ 229 (267)
T cd06646 160 IA-------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---ALFLMSKSNFQPP 229 (267)
T ss_pred cc-------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh---hheeeecCCCCCC
Confidence 21 113357899999999885 3447889999999999999999999997543211 1111111111111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.......++.++.+++..||..+|++||++++|++
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 230 KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 11122457889999999999999999999988765
No 143
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.3e-39 Score=312.47 Aligned_cols=248 Identities=26% Similarity=0.432 Sum_probs=197.9
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchH----HHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~----l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
|++++.||+|+||+||++.+..+++.||+|++........ ...|+.+++.+.| ++|..+..+.......+++|++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH-PNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB-TTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc-cccccccccccccccccccccc
Confidence 8999999999999999999999999999999877643332 3458999999964 5555666666668888999999
Q ss_pred CCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 85 LGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 85 ~g~-sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+.+ +|.+++. ....+++..++.++.||+.||.+||++||+|+||||+|||+ +.++.++|+|||++........
T Consensus 80 ~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~~~~~~-- 153 (260)
T PF00069_consen 80 CPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKLSENNE-- 153 (260)
T ss_dssp ETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEESTSTTS--
T ss_pred ccccccccccc-ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccc--
Confidence 955 9999998 45679999999999999999999999999999999999999 4789999999999976422111
Q ss_pred ccccccCCCCccCcccccccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh-
Q 011945 164 HIPYRENKNLTGTARYASMNTHL-GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC- 241 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~-~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~- 241 (474)
......++..|+|||++. +..++.++||||||+++|+|++|..||...........+.+...... .....
T Consensus 154 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 225 (260)
T PF00069_consen 154 -----NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPL---PSSSQQ 225 (260)
T ss_dssp -----EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHH---HHHTTS
T ss_pred -----ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccc---cccccc
Confidence 123457899999999998 78899999999999999999999999987532223333322222111 11111
Q ss_pred -cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 242 -RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 242 -~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
...+.++.++|..||+.||++||++.++++
T Consensus 226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 226 SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 122489999999999999999999887753
No 144
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.3e-39 Score=318.38 Aligned_cols=259 Identities=23% Similarity=0.314 Sum_probs=206.6
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCCc--hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~~--~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
..+|.+.+.||+|+||.||+|.+.. ++..|++|.+...... ..+.+|+.+++.+.|+ ++..+..++......
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~ 82 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHE-HIVKFYGVCGDGDPL 82 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCC-CcceEEEEEccCCce
Confidence 4579999999999999999998543 4567999987654332 4588999999999865 555565666777888
Q ss_pred EEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCC
Q 011945 79 VLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~---------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~ 142 (474)
++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ .+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~---~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG---AN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---cC
Confidence 9999998 899999986432 3489999999999999999999999999999999999994 77
Q ss_pred CeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcH
Q 011945 143 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTK 221 (474)
Q Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~ 221 (474)
+.++|+|||++......... .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--- 231 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--- 231 (291)
T ss_pred CcEEECCCCcccccCCCcee-----ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 89999999999765433211 11233467889999999999999999999999999999998 9999976443
Q ss_pred HHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 222 KQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 222 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
...+..+...... .....+|.++.+++.+||..+|++||++.++.+.|+++....
T Consensus 232 ~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 232 TEVIECITQGRVL----ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred HHHHHHHhCCCCC----CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 2233333322221 223457899999999999999999999999999999996543
No 145
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.6e-39 Score=317.49 Aligned_cols=242 Identities=21% Similarity=0.253 Sum_probs=193.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+.+++.++|++++.. ...+......+++|
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~-~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeee-eEEEecCCEEEEEE
Confidence 48899999999999999999999999999998754321 2346789999999987665554 44455667889999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++ ..+.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeccceeecCCCc
Confidence 998 88999988643 34599999999999999999999999999999999999994 67889999999987553322
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. .....||..|+|||++.+..++.++|||||||++|+|++|..||..............+... .....
T Consensus 157 ~--------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~----~~~~~ 224 (285)
T cd05630 157 T--------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----VQEEY 224 (285)
T ss_pred c--------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh----hhhhc
Confidence 1 12347899999999999999999999999999999999999999875432222222222111 11223
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCC
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPD 265 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt 265 (474)
...+++++.+|+..||+.||++||+
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~R~s 249 (285)
T cd05630 225 SEKFSPDARSLCKMLLCKDPKERLG 249 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHccC
Confidence 4568899999999999999999999
No 146
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-39 Score=317.35 Aligned_cols=253 Identities=21% Similarity=0.291 Sum_probs=199.6
Q ss_pred CcEEEeeeeeecCceEEEEEEEc----CCCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNI----QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~----~~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
..|++.++||+|+||.||+|.+. .++..|++|.+...... ..+.+|+.+++.+.|++++. +..+...+...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC-LLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeee-EEEEEecCCceE
Confidence 57999999999999999999853 45678999987643322 35788999999998655554 555556677889
Q ss_pred EEEecC-CCCHHHHHHHc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCC
Q 011945 80 LVIDLL-GPSLEDLFNFC----------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~----------------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~ 142 (474)
++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ ..
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~---~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG---EQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc---CC
Confidence 999999 78999998532 12478899999999999999999999999999999999994 67
Q ss_pred CeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcH
Q 011945 143 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTK 221 (474)
Q Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~ 221 (474)
+.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--- 232 (283)
T cd05090 161 LHVKISDLGLSREIYSADYY-----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--- 232 (283)
T ss_pred CcEEeccccccccccCCcce-----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 88999999999876433211 11233456788999999998889999999999999999998 9999977533
Q ss_pred HHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 222 KQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 222 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
......+..... ...+..+++++.+++.+||+.||++||++.+|.+.|+.
T Consensus 233 ~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 QEVIEMVRKRQL----LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHcCCc----CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 222233222221 12345789999999999999999999999999888763
No 147
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2e-39 Score=315.53 Aligned_cols=253 Identities=18% Similarity=0.339 Sum_probs=198.5
Q ss_pred EEEeeeeeecCceEEEEEEEcCC---CeEEEEEEeccCCCc----hHHHHHHHHHHHhcCCCCCceeEEEeEeC-----C
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEG-----D 76 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAvK~~~~~~~~----~~l~~E~~il~~l~~~~~i~~l~~~~~~~-----~ 76 (474)
|++.+.||+|+||.||+|....+ +..||||++...... ..+..|+.+++.++|++++..+..+.... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 67899999999999999987653 478999987654322 35788999999998776665554443322 2
Q ss_pred EEEEEEecC-CCCHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEec
Q 011945 77 YNVLVIDLL-GPSLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~-----~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DF 150 (474)
..+++|||+ +++|..++... ...+++..++.++.||+.||.|||++||+||||||+||++ ++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEECCc
Confidence 478999988 88999888532 2358999999999999999999999999999999999999 47789999999
Q ss_pred CCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHh
Q 011945 151 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKIS 229 (474)
Q Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~ 229 (474)
|+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+.+..+.
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---~~~~~~~~ 229 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---HEIYDYLR 229 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH
Confidence 999876543321 11122345678999999998889999999999999999999 9999976543 23333333
Q ss_pred hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 230 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
.... ......++.++.+++.+||..||++||++.++++.|+++
T Consensus 230 ~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 HGNR----LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred cCCC----CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2221 123456889999999999999999999999999999876
No 148
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.9e-39 Score=331.84 Aligned_cols=252 Identities=21% Similarity=0.287 Sum_probs=196.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+.|+++ ..+......+.+.++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-v~~~~~~~~~~~~~l 120 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-VQLFYAFQDDRYLYM 120 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-CeEEEEEEcCCEEEE
Confidence 478999999999999999999999999999999875321 12346788889988875554 455555667888999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
||||+ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 121 v~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 121 VMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCCEEEEeCCceeEcCcC
Confidence 99999 8899999873 4689999999999999999999999999999999999994 7789999999999876433
Q ss_pred CCccccccccCCCCccCccccccccccCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~----~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
... ......||+.|+|||++.+.. ++.++|||||||+||||++|..||... +....+.++.......
T Consensus 196 ~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~---~~~~~~~~i~~~~~~~ 266 (371)
T cd05622 196 GMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD---SLVGTYSKIMNHKNSL 266 (371)
T ss_pred Ccc------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC---CHHHHHHHHHcCCCcc
Confidence 211 123457999999999997643 789999999999999999999999864 3344455554332211
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCC---CCCHHHHHHHHHHHH
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDD---KPDYAYLKRLFRDLF 277 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~---RPt~~~l~~~L~~l~ 277 (474)
..+ ....++.++.++|..||. ++.. |+++++| +++.+
T Consensus 267 ~~~-~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei---~~h~~ 306 (371)
T cd05622 267 TFP-DDNDISKEAKNLICAFLT-DREVRLGRNGVEEI---KRHLF 306 (371)
T ss_pred cCC-CcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHH---hcCcc
Confidence 111 123578999999999998 5555 5565544 44444
No 149
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.5e-39 Score=315.09 Aligned_cols=253 Identities=19% Similarity=0.330 Sum_probs=197.0
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCe--EEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeE-----eCCE
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNE--EVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGV-----EGDY 77 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~--~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~-----~~~~ 77 (474)
|.+.++||+|+||.||+|.+..++. .||||.++... ....+..|+.+++.++|.+++..+..+.. ....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4578899999999999999877765 69999876532 22457889999999987766666544322 1234
Q ss_pred EEEEEecC-CCCHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecC
Q 011945 78 NVLVIDLL-GPSLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 151 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~-----~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFG 151 (474)
.+++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECCCC
Confidence 67888888 78998887422 2348999999999999999999999999999999999999 477899999999
Q ss_pred CccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhh
Q 011945 152 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISE 230 (474)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 230 (474)
+++.+..... +.......++..|++||++.+..++.++|||||||++|||++ |..||.+... .+.+..+..
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~~~ 229 (272)
T cd05075 158 LSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---SEIYDYLRQ 229 (272)
T ss_pred cccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHc
Confidence 9987654321 111123356788999999999999999999999999999999 8999976432 233333332
Q ss_pred ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 231 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 231 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
... ......++..+.+++.+||+.||++||++.+|++.|+++
T Consensus 230 ~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 GNR----LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 221 112356789999999999999999999999999998875
No 150
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.8e-39 Score=313.24 Aligned_cols=255 Identities=16% Similarity=0.265 Sum_probs=203.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCC---CeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
.++|++.+.||+|+||.||+|.+..+ ...||||++...... ..+..|+.+++.++|++++ .+..+.......+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII-RLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcc-eEeEEEecCCceE
Confidence 36799999999999999999998654 457999987654322 3578899999999866544 4555556677789
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
++|||+ +++|.+++......+++..++.++.|++.||.|||++||+|+||||+|||++ .++.++|+|||+++.+..
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCCEEECccchhhcccc
Confidence 999998 7899999986666899999999999999999999999999999999999994 678899999999987752
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
..... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||..... .+....+......
T Consensus 159 ~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~--- 227 (266)
T cd05033 159 SEATY-----TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN---QDVIKAVEDGYRL--- 227 (266)
T ss_pred cccce-----eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH---HHHHHHHHcCCCC---
Confidence 22111 0112345678999999999899999999999999999998 9999976432 2233333222111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
.....+|+.+.+++..||+.+|++||++.+|.+.|.++
T Consensus 228 -~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 -PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11246789999999999999999999999999999876
No 151
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.3e-39 Score=321.72 Aligned_cols=258 Identities=20% Similarity=0.270 Sum_probs=203.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeE--EEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEE--VAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~--vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
-++|++.+.||+|+||.||+|.+..++.. +++|.+.... ....+.+|+.++.++.+|+++..+..++......++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 35899999999999999999998877764 5666654322 123578899999999667777777777788888999
Q ss_pred EEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCe
Q 011945 81 VIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 144 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~---------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~ 144 (474)
+|||+ +++|.+++.... ..+++.+++.++.||+.||+|||++||+||||||+|||++ .++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---CCCc
Confidence 99998 789999986432 2578999999999999999999999999999999999994 6788
Q ss_pred EEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHH
Q 011945 145 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQ 223 (474)
Q Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~ 223 (474)
+||+|||++....... ......++..|+|||++.+..++.++|||||||++|||++ |..||...... +
T Consensus 163 ~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~ 231 (303)
T cd05088 163 AKIADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---E 231 (303)
T ss_pred EEeCccccCcccchhh--------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---H
Confidence 9999999986422110 0112234678999999988889999999999999999998 99999765432 2
Q ss_pred HHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 224 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 224 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
.+..+.... .......+++++.+|+.+||+.+|++||++++++..|..++....
T Consensus 232 ~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 232 LYEKLPQGY----RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred HHHHHhcCC----cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 222222111 111223578899999999999999999999999999998876553
No 152
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.2e-39 Score=312.89 Aligned_cols=248 Identities=21% Similarity=0.323 Sum_probs=195.5
Q ss_pred eeeecCceEEEEEEEc--CCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CC
Q 011945 14 KIGSGSFGEIYLGTNI--QTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GP 87 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~~--~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~ 87 (474)
.||+|+||.||+|.+. ..+..||||++..... .+.+.+|+.+++.+.|++++..+..+ .....++||||+ ++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~--~~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC--EAEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEE--cCCCeEEEEEeCCCC
Confidence 4899999999999865 4456799998765432 24588999999999877766665543 345678999998 88
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccccc
Q 011945 88 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 167 (474)
Q Consensus 88 sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (474)
+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+.......
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~~~~---- 152 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGLSKALGADDSYY---- 152 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCccccccCCccce----
Confidence 99999876566799999999999999999999999999999999999994 67889999999998654332211
Q ss_pred ccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 168 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 168 ~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+....+ ....+..... ..+...+++
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~~~----~~~~~~~~~ 225 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE---VMSFIEQGKR----LDCPAECPP 225 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHHHCCCC----CCCCCCCCH
Confidence 11112234678999999998889999999999999999996 999998754322 2222222211 112356789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 247 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
++.+++..||..+|++||++.+|.+.|+.++
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 9999999999999999999999999998764
No 153
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.1e-39 Score=315.40 Aligned_cols=260 Identities=20% Similarity=0.310 Sum_probs=206.8
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcC----CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~----~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
-.++|++.+.||+|+||.||+|.+.. ++..|++|++..... ...+..|+.+++.+.|.+++..+..+...+..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45789999999999999999999865 367899998764332 23478899999999877777766655555677
Q ss_pred EEEEEecC-CCCHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEe
Q 011945 78 NVLVIDLL-GPSLEDLFNFCS-------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 149 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~-------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~D 149 (474)
.+++++++ +++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEEECC
Confidence 88999988 789999987532 4589999999999999999999999999999999999994 678999999
Q ss_pred cCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHH
Q 011945 150 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i 228 (474)
||+++.+....... ......++..|+|||++.+..++.++|||||||++||+++ |+.||..... ......+
T Consensus 161 ~g~~~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~ 232 (280)
T cd05043 161 NALSRDLFPMDYHC-----LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEMAAYL 232 (280)
T ss_pred CCCcccccCCceEE-----eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHHHHHH
Confidence 99998765433211 0122356788999999999889999999999999999998 9999976543 2222222
Q ss_pred hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 229 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
... ... .....+|+++.+++.+||..+|++||++.++++.|.++..+
T Consensus 233 ~~~-~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 233 KDG-YRL---AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HcC-CCC---CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 221 111 11235789999999999999999999999999999998653
No 154
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-39 Score=337.86 Aligned_cols=253 Identities=20% Similarity=0.226 Sum_probs=196.2
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
.+..|.+.++||.|+||.||+|.+..+++.||||... ...+.+|+++++.|+|.+++.. ..++..+...+++|++
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~HpnIv~l-~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSHPAVLAL-LDVRVVGGLTCLVLPK 241 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCCCCCCcE-EEEEEECCEEEEEEEc
Confidence 4668999999999999999999999999999999643 2346789999999986655554 4556677888999999
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 85 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 85 ~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+.++|.+++......+++..++.|+.||+.||.|||++|||||||||+||||+ ..+.+||+|||+++.+.......
T Consensus 242 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vkL~DFGla~~~~~~~~~~- 317 (461)
T PHA03211 242 YRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDICLGDFGAACFARGSWSTP- 317 (461)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEEEcccCCceecccccccc-
Confidence 99999999876556799999999999999999999999999999999999994 67889999999998664322110
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC-----cHHHHHHHHhhccc-----c
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-----TKKQKYEKISEKKV-----S 234 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~-----~~~~~~~~i~~~~~-----~ 234 (474)
......||..|+|||++.+..++.++|||||||+||||++|..|+...... ...+....+..... .
T Consensus 318 ----~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 318 ----FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred ----cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 113457999999999999999999999999999999999988765432211 11111111111110 0
Q ss_pred c-------------------------hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 235 T-------------------------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 235 ~-------------------------~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
. ....+ ..++.++.+||..||..||.+||++.+|++
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRY-YKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhh-ccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 0 00000 134568999999999999999999888754
No 155
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.5e-39 Score=312.12 Aligned_cols=246 Identities=20% Similarity=0.325 Sum_probs=193.9
Q ss_pred eeeecCceEEEEEEE--cCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 14 KIGSGSFGEIYLGTN--IQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~--~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+||+|+||.||+|.+ ..++..||||+++.... ...+..|+.+++.+.|.+++..+.. .. .+..+++|||+ +
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGI-CE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEE-Ec-CCCcEEEEecCCC
Confidence 689999999999965 45678999998865433 2357889999999987666555543 33 45668899998 6
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..++.++.||+.||.|||++||+||||||.|||++ .++.+||+|||++..........
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~~~~~~~~~~~~--- 152 (257)
T cd05116 80 GPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGLSKALGADENYY--- 152 (257)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCccccccCCCCCee---
Confidence 789999874 45799999999999999999999999999999999999994 67889999999998765432211
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCc
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 245 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 245 (474)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||...... .....+..... ...+..++
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~i~~~~~----~~~~~~~~ 224 (257)
T cd05116 153 -KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQMIESGER----MECPQRCP 224 (257)
T ss_pred -eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHCCCC----CCCCCCCC
Confidence 11122345689999999988889999999999999999998 99999875432 23333332221 12345689
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 246 TEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 246 ~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
+++.++|..||+.||++||++++|.+.|+..
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 9999999999999999999999999988764
No 156
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.9e-39 Score=311.02 Aligned_cols=254 Identities=23% Similarity=0.352 Sum_probs=202.9
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
..++|++.+.||.|+||.||+|.+. .++.||||.+.... ...++.+|+.+++.++|.+.+ .+..+.......+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLI-QLYAVCTLEEPIYIVTE 81 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCcc-ceeEEEecCCCeeeeee
Confidence 3468999999999999999999974 55789999876543 235688999999999865544 55556667777899999
Q ss_pred cC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
++ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||+++.+.....
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEECCcceEEEccCCcc
Confidence 99 899999997433 4689999999999999999999999999999999999994 678899999999987753321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
.. ......+..|+|||++.+..++.++|||||||++|||++ |+.||.+... ...+..+..... . ..
T Consensus 159 ~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~~~-~---~~ 225 (261)
T cd05068 159 EA------REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AEVLQQVDQGYR-M---PC 225 (261)
T ss_pred cc------cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCC-C---CC
Confidence 11 112233568999999999899999999999999999999 9999987543 223333322211 1 12
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
...++..+.+++.+||..+|++||++.+|.+.|+++
T Consensus 226 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 226 PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 245789999999999999999999999999998753
No 157
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.3e-39 Score=317.21 Aligned_cols=256 Identities=17% Similarity=0.305 Sum_probs=200.6
Q ss_pred cEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
+|++.+.||+|+||.||+|.+.. ....|++|.+..... ...+..|+.+++.+.|++++..+ .++......+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLY-GACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEE-EEEecCCCcE
Confidence 58899999999999999998753 235789998765433 23588899999999876655544 4556667788
Q ss_pred EEEecC-CCCHHHHHHHcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEE
Q 011945 80 LVIDLL-GPSLEDLFNFCS-----------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFL 135 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~-----------------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NIL 135 (474)
++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 999998 789999886421 24789999999999999999999999999999999999
Q ss_pred eeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 011945 136 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQ 214 (474)
Q Consensus 136 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~ 214 (474)
++ +++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 160 l~---~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 231 (290)
T cd05045 160 VA---EGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 231 (290)
T ss_pred Ec---CCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence 94 6789999999999865433221 11123356778999999998889999999999999999998 999997
Q ss_pred CCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 215 GLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
+.... .....+ ...... .....++.++.+++..||+.+|++||++.++.+.|++++.+
T Consensus 232 ~~~~~---~~~~~~-~~~~~~---~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 232 GIAPE---RLFNLL-KTGYRM---ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CCCHH---HHHHHH-hCCCCC---CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 65432 222222 211111 12356789999999999999999999999999999999854
No 158
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.1e-38 Score=312.68 Aligned_cols=253 Identities=21% Similarity=0.237 Sum_probs=195.9
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++.+.||+|+||.||+|.+..+++.||||++.... ....+..|+.+++.+.|++ +..+..+...+...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN-IVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCC-EeeeEEEEeeCCeEEEEEe
Confidence 5899999999999999999998899999999875432 2346888999999998555 5555555667788899999
Q ss_pred cCCCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LLGPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~g~sL~~li~~~~--~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+.++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||++........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 80 FLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred cCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcEEECcccceeecCCCcc
Confidence 99889999886433 5699999999999999999999999999999999999994 778999999999975533211
Q ss_pred ccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH------------
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI------------ 228 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i------------ 228 (474)
......++..|+|||++.+. .++.++|||||||++|+|++|+.||.+.........+...
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 157 -------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred -------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 11233678999999998764 4789999999999999999999999864321111111000
Q ss_pred ---------hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 229 ---------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 229 ---------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
...............+++++.++|.+||..||++||++.+|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 230 TSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000011112223457899999999999999999999887753
No 159
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.7e-39 Score=312.23 Aligned_cols=253 Identities=21% Similarity=0.360 Sum_probs=201.9
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+..++|+++++||+|+||.||+|.+ .+++.||+|.+..... ...+..|+.+++.++|.+++..+. +. .....+++|
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~-~~-~~~~~~~v~ 79 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYA-VV-TQEPIYIIT 79 (260)
T ss_pred cchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEE-EE-ccCCcEEEE
Confidence 3467899999999999999999986 4678899998765433 356889999999998766555544 33 345678999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|++ +++|.+++... ...+++..++.++.|++.||+|||+.||+||||||+||+++ .++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCCCEEEccCcceeecCCCC
Confidence 998 88999988643 34689999999999999999999999999999999999994 77899999999997765322
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.. ......++..|+|||++.+..++.++|||||||++|||++ |+.||.+.... ..+..+..... . .
T Consensus 157 ~~------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~~~-~---~ 223 (260)
T cd05067 157 YT------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP---EVIQNLERGYR-M---P 223 (260)
T ss_pred cc------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH---HHHHHHHcCCC-C---C
Confidence 11 1123456788999999998889999999999999999999 99999875432 22222222111 1 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
....+|.++.+++.+||..+|++||++++|.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 235678999999999999999999999999998875
No 160
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-40 Score=325.43 Aligned_cols=249 Identities=19% Similarity=0.271 Sum_probs=213.0
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
-.|.+-|.+.+.||+|.|.+|-+|++.-+|+.||||++..... ...+.+|++.|+.++|+|+| .++.+.......
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiV-RLYEViDTQTKl 92 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIV-RLYEVIDTQTKL 92 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCee-eeeehhcccceE
Confidence 4577889999999999999999999999999999999876543 34689999999999966555 454455566678
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
||++|+- +|+|.|+|-.....+.+..+.+++.||+.|+.|+|...+|||||||+|+++- .+-|.|||+|||++..+.
T Consensus 93 yLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeeccccccCC
Confidence 9999988 7899999987888899999999999999999999999999999999999886 577999999999998876
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQS-RRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s-~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
.... ..+.+|+..|-|||+++|..|+ +++||||||||||.|++|+.||+..++ .+.+-.|+..+...
T Consensus 171 PG~k--------L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND---SETLTmImDCKYtv- 238 (864)
T KOG4717|consen 171 PGKK--------LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND---SETLTMIMDCKYTV- 238 (864)
T ss_pred Ccch--------hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc---hhhhhhhhcccccC-
Confidence 5432 4578999999999999999986 688999999999999999999987554 34556666666543
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
+..++.+.++||..||..||.+|.+.++|.
T Consensus 239 ----PshvS~eCrdLI~sMLvRdPkkRAslEeI~ 268 (864)
T KOG4717|consen 239 ----PSHVSKECRDLIQSMLVRDPKKRASLEEIV 268 (864)
T ss_pred ----chhhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence 345678999999999999999999988775
No 161
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.3e-39 Score=317.28 Aligned_cols=257 Identities=19% Similarity=0.320 Sum_probs=203.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCC-----CeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
.++|++.+.||+|+||.||++.+... ...||+|++...... ..+..|+.+++.+..++++..+..++..+..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 46899999999999999999997643 378999987654322 3477899999999555666666666667778
Q ss_pred EEEEEecC-CCCHHHHHHHc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC
Q 011945 78 NVLVIDLL-GPSLEDLFNFC---------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~---------------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~ 141 (474)
.+++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~---~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT---E 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc---C
Confidence 89999988 88999998632 34689999999999999999999999999999999999994 6
Q ss_pred CCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCc
Q 011945 142 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGT 220 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~ 220 (474)
++.+||+|||+++.+....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-- 240 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYR-----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-- 240 (293)
T ss_pred CCeEEeCcccccccccccccee-----ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH--
Confidence 7899999999998765432211 1122345678999999998899999999999999999997 9999976433
Q ss_pred HHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 221 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
.+.+..+...... .....++.++.+|+..||..+|++||++.++++.|++++
T Consensus 241 -~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 -EELFKLLKEGYRM----EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -HHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 2222222222111 123456889999999999999999999999999998874
No 162
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.9e-39 Score=326.45 Aligned_cols=249 Identities=19% Similarity=0.237 Sum_probs=191.1
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
..+|++++.||+|+||.||+|.+..+++.||+|+.... ....|+.+++.++|++++. +..++......++||+++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----TTLIEAMLLQNVNHPSVIR-MKDTLVSGAITCMVLPHY 139 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----ccHHHHHHHHhCCCCCCcC-hhheEEeCCeeEEEEEcc
Confidence 34699999999999999999999999999999975432 3467999999999765554 445556777889999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
.++|.+++......+++..++.|+.||+.||.|||++|||||||||+|||+ +..+.+||+|||+++.......
T Consensus 140 ~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~---- 212 (357)
T PHA03209 140 SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAPA---- 212 (357)
T ss_pred CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCcc----
Confidence 999999987667789999999999999999999999999999999999999 4778899999999975332211
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHH-------HHHHHHhhc-c-----
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-------QKYEKISEK-K----- 232 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~-------~~~~~i~~~-~----- 232 (474)
.....||..|+|||++.+..++.++|||||||++|||+++..|+......... ..+..+... .
T Consensus 213 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 288 (357)
T PHA03209 213 ----FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEE 288 (357)
T ss_pred ----cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhh
Confidence 13457999999999999999999999999999999999865554332221100 011111100 0
Q ss_pred cc-----chHH-----------------HH-hcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 VS-----TSIE-----------------AL-CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 ~~-----~~~~-----------------~l-~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
+. .... .+ ...++.++.+||.+||..||.+||++.+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l 349 (357)
T PHA03209 289 FPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEIL 349 (357)
T ss_pred cCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHh
Confidence 00 0000 00 124567788899999999999999987764
No 163
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.1e-39 Score=318.59 Aligned_cols=257 Identities=18% Similarity=0.271 Sum_probs=198.8
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCC----------------eEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCc
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN----------------EEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIP 66 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~----------------~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~ 66 (474)
.++|+++++||+|+||.||+|.+..++ ..||+|++..... ...+..|+++++.+.|++++.
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 468999999999999999999876543 5689998765432 345788999999998665554
Q ss_pred eeEEEeEeCCEEEEEEecC-CCCHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEE
Q 011945 67 NLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFL 135 (474)
Q Consensus 67 ~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~----------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NIL 135 (474)
+..++..+...+++||++ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+
T Consensus 84 -~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 84 -LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred -EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 445555667889999988 789999987543 26899999999999999999999999999999999999
Q ss_pred eeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh--CCCCC
Q 011945 136 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPW 213 (474)
Q Consensus 136 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt--G~~Pf 213 (474)
++ ..+.++|+|||++.......... ......++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 163 i~---~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~ 234 (296)
T cd05051 163 VG---KNYTIKIADFGMSRNLYSSDYYR-----VQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY 234 (296)
T ss_pred ec---CCCceEEccccceeecccCccee-----ecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence 95 66899999999997654332111 1223456789999999998889999999999999999998 78898
Q ss_pred CCCCcCcHHHHHHHHhhc---cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 214 QGLKAGTKKQKYEKISEK---KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 214 ~~~~~~~~~~~~~~i~~~---~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
...... ..+..+... ............+|.++.+++..||+.||++||++.+|.+.|+
T Consensus 235 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 235 EHLTDQ---QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCcChH---HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 764432 222222211 0000001112456789999999999999999999999988775
No 164
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.8e-39 Score=312.52 Aligned_cols=251 Identities=20% Similarity=0.343 Sum_probs=196.4
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEe------CCE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVE------GDY 77 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~------~~~ 77 (474)
..+.|++.+.||.|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+.+|+++..+..++.. ...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 3567999999999999999999999999999999886543 234688999999999655555555444332 356
Q ss_pred EEEEEecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 78 NVLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
.+++|||+ +++|.+++... ...+++..++.++.||+.||.|||+++|+|+||||+||+++ .++.++|+|||++..
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~---~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC---CCCCEEEccCCCcee
Confidence 89999999 67999998753 34689999999999999999999999999999999999994 678899999999986
Q ss_pred cccCCCccccccccCCCCccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 230 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (474)
...... ......|+..|+|||++. +..++.++|||||||++|||++|..||...... .....+..
T Consensus 161 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~---~~~~~~~~ 230 (272)
T cd06637 161 LDRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM---RALFLIPR 230 (272)
T ss_pred cccccc-------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH---HHHHHHhc
Confidence 543221 123457899999999986 335788999999999999999999999764322 11111111
Q ss_pred ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 231 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 231 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
... .......++.++.+|+.+||..+|.+||++.++++
T Consensus 231 ~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NPA---PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCC---CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 111 11112357889999999999999999999887753
No 165
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.1e-38 Score=316.81 Aligned_cols=257 Identities=22% Similarity=0.313 Sum_probs=202.9
Q ss_pred CCcEEEeeeeeecCceEEEEEEEc-----CCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
.++|.+.+.||+|+||.||++.+. .++..||||+++.... .+.+..|+.+++++.+|++|..+..++.....
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 458999999999999999999852 3456899998765432 23578899999999556666666666777778
Q ss_pred EEEEEecC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 78 NVLVIDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
.+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||+++|+|+||||+|||++ .++.++|+|||+++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CCCeEEECCCccccc
Confidence 89999998 789999987433 3389999999999999999999999999999999999994 678899999999986
Q ss_pred cccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
+....... ......++..|+|||++.+..++.++|||||||++|||++ |..||........ ....+.. ...
T Consensus 191 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~~~~~~-~~~ 262 (302)
T cd05055 191 IMNDSNYV-----VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FYKLIKE-GYR 262 (302)
T ss_pred ccCCCcee-----ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HHHHHHc-CCc
Confidence 65432110 1123456788999999999899999999999999999998 9999987543221 1122111 111
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
. ......++++.+++.+||..+|++||++.+|++.|+++
T Consensus 263 ~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 M---AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred C---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1 12235688999999999999999999999999999875
No 166
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-40 Score=346.53 Aligned_cols=258 Identities=24% Similarity=0.351 Sum_probs=214.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
.+.++.+.||+|.||+||+|+-.. ....||||.++.+.. ..+|++|++++..|+| ++|+.+.+.+.+++..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H-~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQH-PNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccC-CCeEEEEEEEccCCee
Confidence 456788999999999999998542 345799998876544 3569999999999995 5566666777888999
Q ss_pred EEEEecC-CCCHHHHHHHcCC---------C----CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCe
Q 011945 79 VLVIDLL-GPSLEDLFNFCSR---------K----LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 144 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~---------~----l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~ 144 (474)
|+|+||| .|+|.+++..... . ++..+.+.|+.|||.||+||-++.+|||||-..|+||+ +...
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg---e~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG---ENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec---cceE
Confidence 9999999 8999999975421 2 78899999999999999999999999999999999995 8899
Q ss_pred EEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHH
Q 011945 145 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQ 223 (474)
Q Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~ 223 (474)
|||+||||++..-..++ |+......-..+||+||.++-.+|+.+||||||||+|||+++ |+.||.++.. .+
T Consensus 642 VKIsDfGLsRdiYssDY-----Yk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn---~E 713 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDY-----YKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN---QE 713 (774)
T ss_pred EEecccccchhhhhhhh-----hcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch---HH
Confidence 99999999987655444 222223345789999999999999999999999999999998 9999999765 44
Q ss_pred HHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 224 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 224 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
.++.+..... -..++.||.++.+||..||+.+|.+||+|.+|...|++.....
T Consensus 714 VIe~i~~g~l----L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 714 VIECIRAGQL----LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred HHHHHHcCCc----ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 5555555443 2345789999999999999999999999999999999886544
No 167
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.7e-39 Score=317.71 Aligned_cols=260 Identities=17% Similarity=0.302 Sum_probs=206.1
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEc-------CCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEe
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNI-------QTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVE 74 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~-------~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~ 74 (474)
..++|.+.+.||+|+||.||+|++. ..+..||+|+..... ....+..|+.+++.+..|++|..+..+...
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3568999999999999999999753 234579999876432 224588999999999556666666666677
Q ss_pred CCEEEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeee
Q 011945 75 GDYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 138 (474)
Q Consensus 75 ~~~~~lv~e~~-g~sL~~li~~~~---------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~ 138 (474)
....+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||++
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~- 171 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT- 171 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc-
Confidence 77889999999 789999987532 2478889999999999999999999999999999999994
Q ss_pred CCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 011945 139 GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLK 217 (474)
Q Consensus 139 ~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~ 217 (474)
.++.+||+|||+++.+....... ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus 172 --~~~~~kl~D~g~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 172 --ENNVMKIADFGLARDVNNIDYYK-----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred --CCCcEEECCCccceecccccccc-----cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 67899999999998765432211 1122356778999999999889999999999999999998 889997643
Q ss_pred cCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 218 AGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
..+.+..+...... .....++.++.+++.+||..+|++||++.++++.|++++.-
T Consensus 245 ---~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 245 ---VEELFKLLKEGHRM----DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred ---HHHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 23333333222211 12346789999999999999999999999999999998754
No 168
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.2e-38 Score=308.23 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=202.4
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.++|++.+.||.|+||.||+|.+..+++.|++|++.... ....+..|+.+++.++|++++. +..+...+...+++||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~l~~e 80 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVA-YFGSYLRRDKLWIVME 80 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhc-eEEEEEeCCEEEEEEe
Confidence 368999999999999999999998899999999876543 3456899999999998666555 4555667788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++......+++..++.++.|++.||.|||++||+|+||||+||+++ .++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEECccccchhhhhhhh-
Confidence 99 6799999876557899999999999999999999999999999999999994 678899999999976544221
Q ss_pred cccccccCCCCccCccccccccccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~---~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
......++..|+|||.+.+. .++.++|||||||++|||++|..||..... ......+...........
T Consensus 157 ------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 227 (262)
T cd06613 157 ------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP---MRALFLISKSNFPPPKLK 227 (262)
T ss_pred ------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhccCCCcccc
Confidence 12345788999999999877 789999999999999999999999987542 222222222211111111
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
....++.++.+++.+||..+|.+||++.+|+.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 22346788999999999999999999988753
No 169
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=7.2e-39 Score=309.01 Aligned_cols=247 Identities=21% Similarity=0.284 Sum_probs=200.5
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.|++++.||.|+||.||++.+..+++.||||.+..... .+.+..|+++++.++|.+++..+..+.......+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 59999999999999999999999999999998765432 23578899999999877766665555445667899999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
++ +++|.+++... ...+++.+++.++.||+.||.|||++||+|+||||+||+++ ..+.++|+|||++..+.....
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEEecccceEEecccCC
Confidence 98 78999988753 34589999999999999999999999999999999999994 678999999999987643322
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+...... .+.
T Consensus 158 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~---~~~~~~~~~~~~~~----~~~ 223 (257)
T cd08223 158 -------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD---MNSLVYRIIEGKLP----PMP 223 (257)
T ss_pred -------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHhcCCC----CCc
Confidence 1234578999999999999999999999999999999999999997533 22222233222221 233
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..+++++.+++.+||+.+|++||++.++++
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 567899999999999999999999887753
No 170
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6.2e-39 Score=309.60 Aligned_cols=246 Identities=21% Similarity=0.262 Sum_probs=200.1
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
+|++.++||.|+||.||++.+..+++.||+|.++... ..+.+..|+.+++.++|.+ +..+...+..+...+++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPN-IVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCC-cceEEEEEEECCEEEEEEee
Confidence 5899999999999999999999999999999875432 2345788999999998655 45555566777889999999
Q ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 85 L-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 85 ~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||+ +.++.++|+|||++..+.....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~~- 155 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPGA- 155 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeeccccc-
Confidence 9 78999988643 3458999999999999999999999999999999999999 4778999999999976644322
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
......|+..|+|||++.+..++.++||||||+++|+|++|..||.... ....+..+...... .+..
T Consensus 156 ------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~---~~~~~~~~~~~~~~----~~~~ 222 (255)
T cd08219 156 ------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS---WKNLILKVCQGSYK----PLPS 222 (255)
T ss_pred ------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC---HHHHHHHHhcCCCC----CCCc
Confidence 1134578999999999999889999999999999999999999997633 22333333222221 1234
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.++..+.+++.+||+.||++||++.+|+.
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 57889999999999999999999888754
No 171
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=7.2e-39 Score=310.44 Aligned_cols=252 Identities=23% Similarity=0.388 Sum_probs=200.4
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
..++|++.++||+|+||.||+|.+..+ ..||+|.+.... ....+.+|+.+++.+.|+++++.+..+ .....+++||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--~~~~~~~v~e 80 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVV--SEEPIYIVTE 80 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEE--cCCCcEEEEE
Confidence 347899999999999999999997544 469999876433 335688999999999988777665544 3455789999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++... ...+++..++.++.||+.||.|||+.||+|+||||+||++ ++++.++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccCCcc
Confidence 98 67999999743 3358999999999999999999999999999999999999 4778999999999976543221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.... ..+..+.... .. ..
T Consensus 158 ~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~~~~-~~---~~ 224 (260)
T cd05069 158 T------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR---EVLEQVERGY-RM---PC 224 (260)
T ss_pred c------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcCC-CC---CC
Confidence 1 1123356788999999998889999999999999999999 99999875432 2233332211 11 12
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
...+|..+.+++.+||..||++||++++|.+.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 34678999999999999999999999999998874
No 172
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-39 Score=318.04 Aligned_cols=253 Identities=20% Similarity=0.237 Sum_probs=199.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCC-----CeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
.+|++.++||.|+||.||+|.+..+ ++.||||++...... ..+..|+.++..++|++++. +..+.......
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~-~~~~~~~~~~~ 83 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVC-LLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCe-EEEEEcCCCce
Confidence 4688899999999999999987543 578999998754432 34788999999998665554 44555666678
Q ss_pred EEEEecC-CCCHHHHHHHc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCC
Q 011945 79 VLVIDLL-GPSLEDLFNFC---------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~---------------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~ 142 (474)
+++++|+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+. ++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~---~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF---DK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---CC
Confidence 8999988 78999988521 23488899999999999999999999999999999999994 67
Q ss_pred CeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcH
Q 011945 143 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTK 221 (474)
Q Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~ 221 (474)
+.+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--- 232 (283)
T cd05091 161 LNVKISDLGLFREVYAADYY-----KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--- 232 (283)
T ss_pred CceEecccccccccccchhe-----eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 78999999998865432211 11223456789999999998889999999999999999998 8899987533
Q ss_pred HHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 222 KQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 222 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
.+.+..+...... .....+|.++.+++..||+.+|++||++.+|...|+.
T Consensus 233 ~~~~~~i~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 QDVIEMIRNRQVL----PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 3334444333322 2346789999999999999999999999999888763
No 173
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=327.62 Aligned_cols=258 Identities=22% Similarity=0.350 Sum_probs=214.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
+.....+||-|.||+||.|.|++-...||||.++.+.. ..+|+.|..+|+.++|+|.|..+..+. .+..+||+.|||
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT-~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-HEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhc-cCCCeEEEEeccc
Confidence 34566899999999999999999999999998876654 367999999999999777766665554 444556677766
Q ss_pred CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 g~sL~~li~~~~~~-l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
.|+|.+++..|++. ++....+.++.||..||+||..+++|||||-..|+|++ .+..|||+||||++.+..+....|
T Consensus 347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeeccchhhhhcCCceecc
Confidence 99999999988765 77788889999999999999999999999999999995 788999999999999988765443
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
. ...-.+.|.|||.+.-..++.|+|||+|||+|||+.| |.-||.+.+. .+.|. +.++.+ ...-+.+
T Consensus 424 A------GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl---SqVY~-LLEkgy---RM~~PeG 490 (1157)
T KOG4278|consen 424 A------GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYG-LLEKGY---RMDGPEG 490 (1157)
T ss_pred c------CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH---HHHHH-HHhccc---cccCCCC
Confidence 2 2233578999999998999999999999999999998 9999998654 33332 222222 2233578
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGF 282 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~ 282 (474)
||+.+.+||..||++.|.+||+|.++.+.|+.+|....+
T Consensus 491 CPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSi 529 (1157)
T KOG4278|consen 491 CPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSI 529 (1157)
T ss_pred CCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999976654
No 174
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-42 Score=321.55 Aligned_cols=257 Identities=19% Similarity=0.291 Sum_probs=215.8
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CC
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GP 87 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~ 87 (474)
|.++++||+|+||.||++.++.+|+.||||.+..+...+++..|+.|++++..+..|.++..|+... ..||||||| .|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s-DLWIVMEYCGAG 113 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS-DLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCC-ceEeehhhcCCC
Confidence 6788999999999999999999999999999999888899999999999999777777766666544 469999999 68
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccccc
Q 011945 88 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 167 (474)
Q Consensus 88 sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (474)
++.|+++..++++++.++..++...+.||+|||...-||||||..|||+ +.+|..||+|||.|-.+.+....
T Consensus 114 SiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDTMAK----- 185 (502)
T KOG0574|consen 114 SISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDTMAK----- 185 (502)
T ss_pred cHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhhHHh-----
Confidence 9999999888899999999999999999999999999999999999999 58899999999999887765432
Q ss_pred ccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHH
Q 011945 168 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 247 (474)
Q Consensus 168 ~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 247 (474)
.+++.||+.|||||++....|+.++||||||++..||..|++||.+..+.. .+..|..+..++. .-+..++.+
T Consensus 186 --RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---AIFMIPT~PPPTF--~KPE~WS~~ 258 (502)
T KOG0574|consen 186 --RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR---AIFMIPTKPPPTF--KKPEEWSSE 258 (502)
T ss_pred --hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc---eeEeccCCCCCCC--CChHhhhhH
Confidence 357899999999999999999999999999999999999999998865521 1111211111111 112456789
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 011945 248 FASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQF 284 (474)
Q Consensus 248 l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~ 284 (474)
|.+|++.||.++|++|-|+ .+++++.|+++....
T Consensus 259 F~DFi~~CLiK~PE~R~TA---~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 259 FNDFIRSCLIKKPEERKTA---LRLCEHTFIKNAPGC 292 (502)
T ss_pred HHHHHHHHhcCCHHHHHHH---HHHhhhhhhcCCCcc
Confidence 9999999999999999885 455778887765433
No 175
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.8e-39 Score=330.90 Aligned_cols=257 Identities=25% Similarity=0.327 Sum_probs=202.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEc-----CCCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
++|.+.++||+|+||.||+|++. .+++.||||+++..... ..+..|++++..+..|++|..+..++......
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 46888999999999999999864 34578999998754332 35788999999998556666666667777788
Q ss_pred EEEEecC-CCCHHHHHHHcC------------------------------------------------------------
Q 011945 79 VLVIDLL-GPSLEDLFNFCS------------------------------------------------------------ 97 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~------------------------------------------------------------ 97 (474)
++||||+ +++|.+++....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 9999999 899999986431
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCC
Q 011945 98 -------------------------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 140 (474)
Q Consensus 98 -------------------------------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~ 140 (474)
..+++..++.|+.||+.||.|||+++|+||||||+|||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~--- 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC--- 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe---
Confidence 1367778899999999999999999999999999999995
Q ss_pred CCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcC
Q 011945 141 RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAG 219 (474)
Q Consensus 141 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~ 219 (474)
..+.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNY-----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred CCCEEEEEecCcceeccccccc-----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 6789999999999865432211 11223467889999999999889999999999999999998 89999765322
Q ss_pred cHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 220 TKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 220 ~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
. .....+.. .... .....++.++.+|+.+||..+|++||++.+|++.|+.++
T Consensus 349 ~--~~~~~~~~-~~~~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 E--QFYNAIKR-GYRM---AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred H--HHHHHHHc-CCCC---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1 11121211 1111 123457899999999999999999999999999999875
No 176
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.2e-38 Score=313.98 Aligned_cols=257 Identities=21% Similarity=0.325 Sum_probs=200.4
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCC
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGD 76 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~ 76 (474)
..++|++.++||+|+||.||+|.++. .+..||+|.+...... ..+..|+.+++.+.|+ ++..+..+.....
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCC-CeeeEEEEEcCCC
Confidence 45789999999999999999997642 3558999987644322 2467899999999865 5555555566677
Q ss_pred EEEEEEecC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEE
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVY 146 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~---------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vk 146 (474)
..+++|||+ +++|.+++.... ..++...++.++.||+.||.|||++||+||||||+|||++ .++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCcEE
Confidence 889999998 899999997432 2356788999999999999999999999999999999994 678999
Q ss_pred EEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHH
Q 011945 147 IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKY 225 (474)
Q Consensus 147 L~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~ 225 (474)
|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+.+
T Consensus 160 L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~---~~~~ 231 (288)
T cd05061 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---EQVL 231 (288)
T ss_pred ECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHH
Confidence 999999986543221 111223356778999999999899999999999999999998 8999976433 2222
Q ss_pred HHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 226 EKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 226 ~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
..+..... ......+++.+.+++..||+.+|++||++.++++.|++.+
T Consensus 232 ~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 232 KFVMDGGY----LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHcCCC----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 22222211 1123467899999999999999999999999998888775
No 177
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-38 Score=320.76 Aligned_cols=261 Identities=18% Similarity=0.303 Sum_probs=205.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCC-------CeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-------NEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEG 75 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-------~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~ 75 (474)
..+|++++.||+|+||.||+|.+... +..||+|++..... ...+..|+.+++++..|++|..+..++...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 45799999999999999999986432 24789998765432 245888999999996566666676666777
Q ss_pred CEEEEEEecC-CCCHHHHHHHc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeC
Q 011945 76 DYNVLVIDLL-GPSLEDLFNFC---------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 139 (474)
Q Consensus 76 ~~~~lv~e~~-g~sL~~li~~~---------------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~ 139 (474)
...+++|||+ +++|.+++... ...+++.+++.++.||+.||.|||++||+||||||+|||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~-- 168 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT-- 168 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc--
Confidence 7889999999 78999998642 12478899999999999999999999999999999999994
Q ss_pred CCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCc
Q 011945 140 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA 218 (474)
Q Consensus 140 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~ 218 (474)
.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||+||||++ |..||.+...
T Consensus 169 -~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 169 -EDNVMKIADFGLARDVHNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred -CCCcEEECCcccceeccccccc-----ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 6789999999999866442211 11122345678999999999999999999999999999998 8999977532
Q ss_pred CcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 219 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
...+..+...... .....++.++.+++..||..+|++||++.+|++.|+.++....
T Consensus 243 ---~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 243 ---EELFKLLKEGHRM----DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred ---HHHHHHHHcCCCC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 2333333222111 1234678899999999999999999999999999999986554
No 178
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.3e-38 Score=308.82 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=204.0
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+|+++++.+.|.+.+..+. ++......+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~-~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLA-SFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeee-eeecCCeEEEE
Confidence 68999999999999999999998899999999775321 2346889999999998655554444 45566788999
Q ss_pred EecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 82 IDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
|||+ +++|.+++... ...+++..++.++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||++..+.
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCcEEEeccceeeecc
Confidence 9999 78999998643 34589999999999999999999999999999999999994 67889999999987654
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
..... .....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ........+.........
T Consensus 158 ~~~~~-------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~ 229 (267)
T cd08224 158 SKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEKCDYPPLP 229 (267)
T ss_pred CCCcc-------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-cHHHHHhhhhcCCCCCCC
Confidence 43211 1234688999999999998899999999999999999999999975432 222223332222221111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
...++.++.++|.+||..+|++||++.+|++.|+++
T Consensus 230 ---~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 230 ---ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred ---hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 125678999999999999999999999999999876
No 179
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6.5e-39 Score=314.40 Aligned_cols=251 Identities=20% Similarity=0.244 Sum_probs=196.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++.+.||.|+||.||+|.+..+|+.||+|.+..... ...+..|+.+++.++|++++. +..+.......++++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR-LYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeee-HHHHhccCCceEEEEe
Confidence 58999999999999999999999999999998764322 245788999999998665554 4444566778899999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 84 ~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
|++++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+++.+.....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~-- 154 (284)
T cd07839 80 YCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPVR-- 154 (284)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEECccchhhccCCCCC--
Confidence 999999998876667799999999999999999999999999999999999994 678999999999986543221
Q ss_pred ccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc---------
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV--------- 233 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--------- 233 (474)
......++..|+|||++.+.. ++.++|||||||++|+|++|..||..... ....+..+.....
T Consensus 155 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07839 155 -----CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEESWPG 227 (284)
T ss_pred -----CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCC--HHHHHHHHHHHhCCCChHHhHH
Confidence 112346789999999988754 79999999999999999999998643222 2222222211000
Q ss_pred ---------------cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 234 ---------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 234 ---------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..........+++++.++|.+||..||.+|||++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 228 VSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00011223456789999999999999999999887753
No 180
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.9e-39 Score=311.25 Aligned_cols=250 Identities=18% Similarity=0.267 Sum_probs=199.5
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
.++|++.+.||+|+||.||+|.+. .+..||||.+.... ....+..|+.+++.++|+ +|..+..++......+++|||
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHE-KLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCC-CeeeEEEEEccCCCcEEEEEc
Confidence 357999999999999999999864 34569999876543 245689999999999855 555565566677778999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 85 ~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+ +++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||+++.......
T Consensus 81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~~~~~~~~-- 155 (256)
T cd05113 81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKVSDFGLSRYVLDDEY-- 155 (256)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEECCCccceecCCCce--
Confidence 8 7899999976555799999999999999999999999999999999999994 678899999999986544321
Q ss_pred ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.......++..|++||++.+..++.++|||||||++|+|++ |..||..... ......+...... ....
T Consensus 156 ----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~----~~~~ 224 (256)
T cd05113 156 ----TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---SETVEKVSQGLRL----YRPH 224 (256)
T ss_pred ----eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHhcCCCC----CCCC
Confidence 11123356788999999998889999999999999999998 9999976543 2223333332211 1123
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
..+.++.+++..||..+|++||++.+|++.|
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 225 LASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 4678999999999999999999999988765
No 181
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.7e-39 Score=308.80 Aligned_cols=246 Identities=20% Similarity=0.301 Sum_probs=193.4
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
++||+|+||.||+|.+..+++.||+|....... ...+.+|+++++.+.|.+++ .+..++......++||||+ +++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV-RLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcc-eEEEEEcCCCCeEEEEeeccCCc
Confidence 479999999999999988999999998654322 24588999999999865554 5555566677889999998 889
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccc
Q 011945 89 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 168 (474)
Q Consensus 89 L~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (474)
|.+++......+++.+++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..........
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~~----- 151 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDGVYAS----- 151 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccCcccccccccc-----
Confidence 9999875555789999999999999999999999999999999999994 67889999999997654321100
Q ss_pred cCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHH
Q 011945 169 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 247 (474)
Q Consensus 169 ~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 247 (474)
......++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....+.. .... .....+|.+
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~---~~~~~~~-~~~~---~~~~~~~~~ 224 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ---TREAIEQ-GVRL---PCPELCPDA 224 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH---HHHHHHc-CCCC---CCcccCCHH
Confidence 0011123567999999999889999999999999999997 999997644321 1222211 1111 123467899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 248 FASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 248 l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
+.+++.+||..+|++||++.+|.+.|.
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 999999999999999999999988775
No 182
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.1e-38 Score=312.44 Aligned_cols=262 Identities=19% Similarity=0.255 Sum_probs=207.3
Q ss_pred CCCccCCcEEEeeeeeecCceEEEEEEEcCCCe----EEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeE
Q 011945 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGV 73 (474)
Q Consensus 1 m~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~ 73 (474)
|......+|++.+.||+|+||.||+|.+..+++ .||+|........ ..+.+|+.+++.+.|++++..+..+.
T Consensus 1 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~- 79 (279)
T cd05057 1 LRILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL- 79 (279)
T ss_pred CcccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-
Confidence 345667899999999999999999999876664 5899987655432 35788999999998766666555443
Q ss_pred eCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCC
Q 011945 74 EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (474)
Q Consensus 74 ~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (474)
. ...+++|||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||+ +..+.+||+|||+
T Consensus 80 ~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg~ 155 (279)
T cd05057 80 S-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGL 155 (279)
T ss_pred c-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCcc
Confidence 3 5678889888 889999998666679999999999999999999999999999999999999 4678899999999
Q ss_pred ccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhc
Q 011945 153 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEK 231 (474)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~ 231 (474)
++.......... .....++..|+|||.+.+..++.++|||||||++||+++ |..||.+..... ....+...
T Consensus 156 ~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~ 227 (279)
T cd05057 156 AKLLDVDEKEYH-----AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---IPDLLEKG 227 (279)
T ss_pred cccccCccccee-----cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---HHHHHhCC
Confidence 987653322110 112234678999999988889999999999999999998 999998754322 22222221
Q ss_pred cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 232 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
.. . .....++..+.+++.+||..+|++||++.++.+.|.+++..
T Consensus 228 ~~-~---~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 228 ER-L---PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CC-C---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 11 1 11234678999999999999999999999999999998753
No 183
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.7e-39 Score=317.88 Aligned_cols=259 Identities=20% Similarity=0.300 Sum_probs=196.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCC--------------eEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTN--------------EEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLR 69 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~--------------~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~ 69 (474)
++|++.++||+|+||.||+|.+..++ ..||||++..... ...+.+|+++++.++|++ +..+.
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~-i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPN-IIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCC-cCeEE
Confidence 58999999999999999999875432 3589998765422 235888999999998655 55555
Q ss_pred EEeEeCCEEEEEEecC-CCCHHHHHHHcC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEee
Q 011945 70 WFGVEGDYNVLVIDLL-GPSLEDLFNFCS-----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMG 137 (474)
Q Consensus 70 ~~~~~~~~~~lv~e~~-g~sL~~li~~~~-----------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~ 137 (474)
.++......+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~ 163 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG 163 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc
Confidence 5556677889999998 889999986422 1368899999999999999999999999999999999994
Q ss_pred eCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q 011945 138 LGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPWQG 215 (474)
Q Consensus 138 ~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt--G~~Pf~~ 215 (474)
.++.+||+|||++........ ........++..|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus 164 ---~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 164 ---NHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred ---CCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 677899999999976543221 111223456789999999998899999999999999999988 7788876
Q ss_pred CCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 216 LKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
...........+................+|+.+.+|+.+||..+|++||++++|.+.|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 236 LSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 54322222211111111010111123457899999999999999999999999988875
No 184
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=9.2e-39 Score=313.41 Aligned_cols=256 Identities=18% Similarity=0.213 Sum_probs=197.9
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCe----EEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
.++|++++.||+|+||+||+|.+..+++ .|++|.+...... ..+..|+.++..+.|++++..+. ++.. ...
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~-~~~~-~~~ 83 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLG-ICPG-ASL 83 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEE-EECC-Ccc
Confidence 4679999999999999999999877776 4777776543222 34566777778888766555544 4433 345
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
++++|++ +++|.+++......+++..++.|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceecc
Confidence 5666666 899999998666789999999999999999999999999999999999999 467899999999998654
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
...... ......++..|++||++.+..++.++|||||||++|||++ |..||.+..... +..+........
T Consensus 161 ~~~~~~-----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~----~~~~~~~~~~~~ 231 (279)
T cd05111 161 PDDKKY-----FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE----VPDLLEKGERLA 231 (279)
T ss_pred CCCccc-----ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHHCCCcCC
Confidence 332111 1123467789999999998899999999999999999998 999998754321 222222211111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 278 (474)
....++..+.+++..||..+|++||++.++.+.|..+..
T Consensus 232 ---~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 232 ---QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 123467889999999999999999999999999988764
No 185
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=7e-39 Score=316.80 Aligned_cols=260 Identities=18% Similarity=0.266 Sum_probs=197.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcC----------------CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCc
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQ----------------TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIP 66 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~----------------~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~ 66 (474)
.++|++.++||+|+||.||++.+.. ++..||||++..... ...+..|+.+++.++|.+ +.
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPN-II 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC-cc
Confidence 4679999999999999999986432 345799998865432 245889999999998655 44
Q ss_pred eeEEEeEeCCEEEEEEecC-CCCHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEE
Q 011945 67 NLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFL 135 (474)
Q Consensus 67 ~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~----------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NIL 135 (474)
.+..++......+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 5555666777789999998 789999987432 23778899999999999999999999999999999999
Q ss_pred eeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh--CCCCC
Q 011945 136 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPW 213 (474)
Q Consensus 136 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt--G~~Pf 213 (474)
++ .++.++|+|||+++.+...... .......++..|++||+..+..++.++|||||||++|||++ |..||
T Consensus 163 i~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~ 234 (296)
T cd05095 163 VG---KNYTIKIADFGMSRNLYSGDYY-----RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPY 234 (296)
T ss_pred Ec---CCCCEEeccCcccccccCCcce-----eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCc
Confidence 94 6788999999999865433211 11122345678999999988899999999999999999998 78999
Q ss_pred CCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 214 QGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
..............................+|+.+.+|+..||..||++||++.+|.+.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 235 SQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred cccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 7654322221111111100000001112457899999999999999999999999988875
No 186
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.3e-39 Score=319.23 Aligned_cols=256 Identities=18% Similarity=0.222 Sum_probs=190.7
Q ss_pred eeeeeecCceEEEEEEEcC--CCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEe-EeCCEEEEEEecCCCC
Q 011945 12 GRKIGSGSFGEIYLGTNIQ--TNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFG-VEGDYNVLVIDLLGPS 88 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~--~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~-~~~~~~~lv~e~~g~s 88 (474)
..+||+|+||+||+|.+.. ++..||+|.+........+.+|+.+++.++|++++..+..+. ..+...+++|||++++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~ 85 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHD 85 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCc
Confidence 4689999999999999654 568899998876655667889999999999877776666554 3456789999999999
Q ss_pred HHHHHHHc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeC-CCCCeEEEEecCCccccccC
Q 011945 89 LEDLFNFC--------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 89 L~~li~~~--------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~~ 159 (474)
|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+..+ +..+.+||+|||+++.+...
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~ 165 (317)
T cd07867 86 LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165 (317)
T ss_pred HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCC
Confidence 99988532 1248899999999999999999999999999999999999432 35678999999999876543
Q ss_pred CCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH------HHHHHHHhhcc
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK------KQKYEKISEKK 232 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~------~~~~~~i~~~~ 232 (474)
... ........||..|+|||++.+. .++.++|||||||++|||++|+.||........ ...+..+....
T Consensus 166 ~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 166 LKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred ccc----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 221 1122345789999999999874 589999999999999999999999975322100 00011100000
Q ss_pred c----------------c-------------chH----HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 V----------------S-------------TSI----EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 ~----------------~-------------~~~----~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
. . ... +......+..+.+|+.+||..||.+|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 0 0 000 0001123457889999999999999999887753
No 187
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-38 Score=310.49 Aligned_cols=256 Identities=16% Similarity=0.260 Sum_probs=203.5
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCC---eEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN---EEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~---~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+..... ...+..|+.+++.++|++ +..+..+...++..+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPN-IIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCC-cceEEEEEecCCccE
Confidence 468999999999999999999986544 3799998765332 245888999999998655 555555666778899
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
++|||+ +++|.+++......+++.+++.++.||+.||.|||++||+||||||+|||++ .++.++|+|||++..+..
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCeEEeCCCCccccccc
Confidence 999999 7899999986666799999999999999999999999999999999999994 678999999999987654
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
..... .......++..|++||++.+..++.++|||||||++||+++ |..||.+.... +.+..+.... ..
T Consensus 159 ~~~~~----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---~~~~~~~~~~-~~-- 228 (267)
T cd05066 159 DPEAA----YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---DVIKAIEEGY-RL-- 228 (267)
T ss_pred cccee----eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---HHHHHHhCCC-cC--
Confidence 32211 01112234678999999999899999999999999999886 99999875432 2233332221 11
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
.....+|+.+.+++.+||+.+|++||++.++.+.|.++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 -PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 12246789999999999999999999999999998875
No 188
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=6.6e-39 Score=309.98 Aligned_cols=249 Identities=22% Similarity=0.303 Sum_probs=199.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
.+|++.+.||+|+||.||+|.+. ++..+|||++.... ....+..|+.+++.++|.+ +..+..++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPN-LVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCC-EEEEEEEEcCCCceEEEEecC
Confidence 46899999999999999999875 56789999876543 3346888999999998654 555555666777889999998
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 -g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+++...+....
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~~~~~~~~~~-- 156 (256)
T cd05059 82 ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLARYVLDDQYT-- 156 (256)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEECCcccceeccccccc--
Confidence 8899999975556799999999999999999999999999999999999994 6788999999999765432211
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+.+..+.... . ......
T Consensus 157 ----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~-~---~~~~~~ 225 (256)
T cd05059 157 ----SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN---SEVVESVSAGY-R---LYRPKL 225 (256)
T ss_pred ----ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH---HHHHHHHHcCC-c---CCCCCC
Confidence 1112234568999999999899999999999999999999 8999976543 22233332221 1 112345
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
+|.++.+++.+||..+|++||++.++++.|
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 789999999999999999999999988765
No 189
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-40 Score=300.11 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=209.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.++|++++.||.|-||.||+|+.+.++-.||+|++... ....++.+|++|...|+|+|++ .++.++.+....||
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnil-rlY~~fhd~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNIL-RLYGYFHDSKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHH-hhhhheeccceeEE
Confidence 46899999999999999999999999999999986543 2345789999999999965554 55556667778899
Q ss_pred EEecC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 81 VIDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 81 v~e~~-g~sL~~li~~-~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
++||. +|.|...+.. ...+|++.....++.|++.||.|+|.++||||||||+|+|++ ..+.+||+|||.+.....
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg---~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC---CCCCeeccCCCceeecCC
Confidence 99998 7788777763 345699999999999999999999999999999999999995 788999999999875432
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
. ...++|||..|.+||+..+..++..+|+|++|++.|||+.|..||.... ..+.|.+|.......
T Consensus 177 ~---------kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~---~~etYkrI~k~~~~~--- 241 (281)
T KOG0580|consen 177 N---------KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS---HSETYKRIRKVDLKF--- 241 (281)
T ss_pred C---------CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh---hHHHHHHHHHccccC---
Confidence 1 2357899999999999999999999999999999999999999998754 556677766655433
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
+..++.+..++|.+|+.++|.+|....++ +++.++.
T Consensus 242 --p~~is~~a~dlI~~ll~~~p~~r~~l~~v---~~hpwI~ 277 (281)
T KOG0580|consen 242 --PSTISGGAADLISRLLVKNPIERLALTEV---MDHPWIV 277 (281)
T ss_pred --CcccChhHHHHHHHHhccCccccccHHHH---hhhHHHH
Confidence 36788999999999999999999995554 5555543
No 190
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.4e-38 Score=304.90 Aligned_cols=246 Identities=24% Similarity=0.309 Sum_probs=200.7
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|.+.+.||+|+||.||+|.+..+++.|++|.+.... ....+..|+++++.++|++++..+ .++......+++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYY-ESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehhe-eeeccCCEEEEEEE
Confidence 5889999999999999999999999999999876432 234578899999999866555544 45566778899999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||+++.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEcccccceeccCccc
Confidence 88 88999999754 45799999999999999999999999999999999999995 678999999999987654322
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
. .....|+..|+|||++.+..++.++|||||||++|+|++|+.||.... .......+...... .+.
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~----~~~ 222 (256)
T cd08529 157 F-------ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN---QGALILKIIRGVFP----PVS 222 (256)
T ss_pred h-------hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCCC----CCc
Confidence 1 133578899999999999899999999999999999999999997644 23333333332221 122
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..++.++.+++.+||+.+|++||++.++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 367899999999999999999999888754
No 191
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.1e-39 Score=310.76 Aligned_cols=253 Identities=22% Similarity=0.364 Sum_probs=200.7
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+..++|++.++||+|+||.||+|.+. .+..||+|.+..... ...+.+|+.+++.++|.+++..+..+ . ....+++|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~-~-~~~~~lv~ 79 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVV-S-EEPIYIVT 79 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEE-C-CCCcEEEE
Confidence 34578999999999999999999864 566799998765433 35688999999999977666655443 2 34568999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||+ +++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++ +++.++|+|||++..+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCceeeeeccCcc
Confidence 998 78999998743 34589999999999999999999999999999999999995 67899999999998664432
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.. ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.... .....+.... .. .
T Consensus 157 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~~~~~-~~---~ 223 (260)
T cd05070 157 YT------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR---EVLEQVERGY-RM---P 223 (260)
T ss_pred cc------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHHcCC-CC---C
Confidence 11 1122345678999999998889999999999999999999 99999775432 2233332211 11 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
....++..+.+++.+||..+|++||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 234678999999999999999999999999988864
No 192
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-38 Score=317.07 Aligned_cols=260 Identities=19% Similarity=0.311 Sum_probs=205.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcC-------CCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-------TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEG 75 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-------~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~ 75 (474)
.++|.+.++||+|+||.||+|.+.. ....||+|++...... ..+..|+.+++.+..|++|..+..++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 4689999999999999999998632 3457999987654332 34778999999997566777776666777
Q ss_pred CEEEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeC
Q 011945 76 DYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 139 (474)
Q Consensus 76 ~~~~lv~e~~-g~sL~~li~~~~---------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~ 139 (474)
...+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~-- 168 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT-- 168 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc--
Confidence 7889999998 789999996432 3488999999999999999999999999999999999994
Q ss_pred CCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCc
Q 011945 140 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA 218 (474)
Q Consensus 140 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~ 218 (474)
.++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 169 -~~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 169 -EDNVMKIADFGLARGVHDIDYYK-----KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred -CCCcEEEcccccccccccccccc-----ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 67889999999998665322211 0112234568999999999889999999999999999999 8999976433
Q ss_pred CcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 219 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
...+..+..... ......++.++.+++.+||..+|++||++.++.+.|.++....
T Consensus 243 ---~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 243 ---EELFKLLREGHR----MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred ---HHHHHHHHcCCC----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 223333322211 1123567889999999999999999999999999999987544
No 193
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.4e-38 Score=312.12 Aligned_cols=252 Identities=20% Similarity=0.251 Sum_probs=196.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCE-----
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY----- 77 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~----- 77 (474)
++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.+++++..+..+......
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 57999999999999999999999999999999865432 234678899999999877777766655554443
Q ss_pred EEEEEecCCCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 78 NVLVIDLLGPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~----~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
.+++|||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++ ..++.+||+|||++
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~--~~~~~~kl~dfg~~ 158 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVD--KQKGLLKIADLGLG 158 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEe--cCCCeEEEeecccc
Confidence 7999999988999988643 23589999999999999999999999999999999999995 33789999999999
Q ss_pred cccccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 232 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (474)
..+..... ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.... ..+.++....
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~ 228 (295)
T cd07837 159 RAFSIPVK-------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL---QQLLHIFKLL 228 (295)
T ss_pred eecCCCcc-------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHHHh
Confidence 86543211 1122356889999998875 45799999999999999999999999864332 2122111100
Q ss_pred -----------------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 -----------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 -----------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
...........++.++.++|..||..||.+||++.+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil 289 (295)
T cd07837 229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAAL 289 (295)
T ss_pred CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHh
Confidence 00111222346789999999999999999999987764
No 194
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.2e-39 Score=310.27 Aligned_cols=255 Identities=25% Similarity=0.334 Sum_probs=203.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.+.||.|+||.||+|.+..+++.||||.+.... ....+..|+.+++.+.|.+++..+ .++..+...+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~-~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY-ASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhh-heeEeCCeEEEE
Confidence 57999999999999999999998999999999765422 123578899999999865555444 455667788999
Q ss_pred EecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 82 IDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||++..+.
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEECcchhhhccc
Confidence 9998 78999988642 34589999999999999999999999999999999999994 67889999999987664
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
..... .....|+..|+|||++.+..++.++|||||||++|+|++|..||.+... ........+.......
T Consensus 158 ~~~~~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~-- 227 (267)
T cd08229 158 SKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEQCDYPP-- 227 (267)
T ss_pred cCCcc-------cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc-hHHHHhhhhhcCCCCC--
Confidence 43221 1234789999999999998899999999999999999999999976432 1222222222211111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
.....+++++.+++.+||..+|++|||+.+|.+.+.++
T Consensus 228 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 228 -LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred -CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 01234788999999999999999999999999999876
No 195
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.2e-39 Score=312.44 Aligned_cols=251 Identities=22% Similarity=0.349 Sum_probs=203.8
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
..+|++.++||.|+||.||+|.+.. ++.|++|++..... ...+..|+.+++.++|.+++ .+..+.......+++||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLI-SLFAVCSVGEPVYIITE 82 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchh-heeeeEecCCCeEEEEe
Confidence 4579999999999999999999876 88999998866543 45688999999999865544 45555567778899999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||++........
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccchhhcCCccc
Confidence 99 77999999743 34689999999999999999999999999999999999994 678999999999987644321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. .....++..|++||++.+..++.++|||||||++|+|++ |+.||..... .+.+..+..... ...
T Consensus 160 ~-------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~----~~~ 225 (261)
T cd05148 160 L-------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVYDQITAGYR----MPC 225 (261)
T ss_pred c-------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHHhCCc----CCC
Confidence 1 123356788999999998889999999999999999998 8999976542 333333332211 112
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
...+++.+.+++..||..||++||++.+|.+.|+.
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 226 PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 35678999999999999999999999999998875
No 196
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.6e-38 Score=307.63 Aligned_cols=250 Identities=24% Similarity=0.344 Sum_probs=198.9
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-------chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+.+|+.+++.+.|+++ ..+..+.......+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI-VQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCe-eeeEEEEccCCeEE
Confidence 579999999999999999999999999999998754321 2357889999999986554 45555556677899
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+++|++ +++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||+++....
T Consensus 81 ~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 81 IFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccceeccc
Confidence 999998 8899999874 35689999999999999999999999999999999999994 678899999999976543
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+..... ..
T Consensus 157 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~---~~ 226 (263)
T cd06625 157 ICSSG----TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA---MAAIFKIATQPT---NP 226 (263)
T ss_pred ccccc----ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch---HHHHHHHhccCC---CC
Confidence 21110 001234688999999999999999999999999999999999999976432 222222222111 12
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.+...++.++.+++..||..+|++||++.++++
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 227 QLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 234567899999999999999999999888754
No 197
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.6e-38 Score=346.03 Aligned_cols=263 Identities=25% Similarity=0.352 Sum_probs=203.0
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.++||+|+||.||+|.+..+++.||||++..... ...+.+|+++++.++|++++. +..++..++..+++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVk-l~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVP-VYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCe-EEEEEeeCCEEEEE
Confidence 689999999999999999999999999999998764322 245888999999999655554 45556677889999
Q ss_pred EecC-CCCHHHHHHHc----------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEec
Q 011945 82 IDLL-GPSLEDLFNFC----------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~----------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DF 150 (474)
|||+ |++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++ ..+.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd---~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG---LFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc---CCCCEEEEec
Confidence 9999 88999998632 12356778899999999999999999999999999999994 7788999999
Q ss_pred CCccccccCCCcc-----------ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC
Q 011945 151 GLAKRYRDTATHQ-----------HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 219 (474)
Q Consensus 151 Gla~~~~~~~~~~-----------~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~ 219 (474)
|+++......... ..........+||+.|||||++.+..++.++|||||||++|||++|..||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9998762211100 00011123457999999999999999999999999999999999999999764321
Q ss_pred cHHHHHHHHhhccccchHH-HHhcCCcHHHHHHHHHHhcCCCCCCC-CHHHHHHHHHHHHHH
Q 011945 220 TKKQKYEKISEKKVSTSIE-ALCRGYPTEFASYFHYCRSLRFDDKP-DYAYLKRLFRDLFIR 279 (474)
Q Consensus 220 ~~~~~~~~i~~~~~~~~~~-~l~~~~p~~l~~li~~cl~~dp~~RP-t~~~l~~~L~~l~~~ 279 (474)
... ... ....+.. .....+|+.+.+++.+||..||++|| +++++.+.|+..+..
T Consensus 238 ki~--~~~----~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 238 KIS--YRD----VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhh--hhh----hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 111 1111111 11246889999999999999999996 567777778777653
No 198
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.6e-38 Score=309.34 Aligned_cols=258 Identities=15% Similarity=0.247 Sum_probs=202.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCe---EEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE---EVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~---~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
.+.|++.+.||.|+||.||+|.+..+++ .||||++..... ...+..|+.+++.+.|++++ .+..+...+...+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~-~~~~~~~~~~~~~ 81 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII-HLEGVVTKSRPVM 81 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcc-eEEEEECCCCceE
Confidence 3579999999999999999999877664 699998765422 24688899999999866555 4555556777789
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
++|||+ +++|.+++......+++.+++.++.|++.||.|||++||+|+||||+||++ +.++.+||+|||++.....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCcccccccc
Confidence 999998 779999998666679999999999999999999999999999999999999 4678999999999876544
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
..... .+........+..|+|||++.+..++.++|||||||++|||++ |..||...... .....+... ...
T Consensus 159 ~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~~~-~~~-- 230 (269)
T cd05065 159 DTSDP--TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIEQD-YRL-- 230 (269)
T ss_pred Ccccc--ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcC-CcC--
Confidence 32211 0111111123468999999999899999999999999999886 99999765432 222333221 111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
.....+|..+.+++..||..+|++||++.+|...|+.+
T Consensus 231 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 -PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11246789999999999999999999999999988765
No 199
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-38 Score=312.65 Aligned_cols=244 Identities=20% Similarity=0.302 Sum_probs=191.6
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|+++++||+|+||.||+|.+..+++.||||++..... ...+..|+++++.+.|++++..+ .++......+++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFY-GAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEE-EEEEECCEEEEEEe
Confidence 468999999999999999999999999999998765422 23578899999999865555544 45556778899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|..+ ..+++..+..++.||+.||.|||+.||+|+||||+|||++ .++.++|+|||++..+....
T Consensus 80 ~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 80 FMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred cCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEeeCCcceeccccc--
Confidence 99 6666443 2578999999999999999999999999999999999994 77899999999998664332
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH----HHHHHHHhhccccchHH
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK----KQKYEKISEKKVSTSIE 238 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~----~~~~~~i~~~~~~~~~~ 238 (474)
.....||..|+|||++.+..++.++|||||||++|+|++|+.||........ ......+.......
T Consensus 150 -------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--- 219 (279)
T cd06619 150 -------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV--- 219 (279)
T ss_pred -------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC---
Confidence 1345799999999999999999999999999999999999999975432211 11111111111100
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.....+++++.+++.+||..+|++||+++++++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 012346789999999999999999999887753
No 200
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.3e-38 Score=311.84 Aligned_cols=249 Identities=18% Similarity=0.335 Sum_probs=194.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|++.+.||+|+||.||+|.+..+|+.||||.++.... ...+..|+.++.+..+++++..+..+...+...+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 479999999999999999999999999999998765432 23466677765555566666666666677778999999
Q ss_pred cCCCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 84 LLGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 84 ~~g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~-gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|+.++|.+++... ...+++..++.++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecccccccccc
Confidence 9999999888642 34689999999999999999999997 99999999999999 47789999999999866432
Q ss_pred CCccccccccCCCCccCccccccccccC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLG----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~----~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
.. .....|+..|+|||++.+ ..++.++|||||||++|+|++|+.||..... ..+.+..+......
T Consensus 158 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~- 226 (283)
T cd06617 158 VA--------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PFQQLKQVVEEPSP- 226 (283)
T ss_pred cc--------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CHHHHHHHHhcCCC-
Confidence 21 122468899999999865 4468999999999999999999999975332 12222222211111
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.. ....+|.++.++|..||..+|++||++.+|++
T Consensus 227 ~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 227 QL--PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CC--CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 11347899999999999999999999887754
No 201
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2e-38 Score=308.32 Aligned_cols=257 Identities=16% Similarity=0.235 Sum_probs=203.2
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCe---EEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNE---EVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~---~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
..++|+..+.||+|+||.||+|.+..++. .||||.+..... ...+..|+++++.+.|++ +..+..+.......
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~ 81 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN-IIRLEGVVTKFKPA 81 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCC-eeEEEEEEccCCCc
Confidence 34689999999999999999999876554 799998765432 345788999999998665 55555566677788
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+++|||+ +++|.+++......+++..++.++.|++.||+|||+.||+|+||||+||+++ .++.+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCcEEECCCccceecc
Confidence 9999998 7799999976667799999999999999999999999999999999999994 67889999999998665
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
....... .......+..|+|||++.+..++.++|||||||++|||++ |..||..... ......+......
T Consensus 159 ~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~~~~~~i~~~~~~-- 229 (268)
T cd05063 159 DDPEGTY----TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---HEVMKAINDGFRL-- 229 (268)
T ss_pred cccccce----eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHHhcCCCC--
Confidence 4322110 0111233567999999998889999999999999999997 9999976433 2233333221111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
.....++.++.+++.+||..+|++||++.+|.+.|+++
T Consensus 230 --~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 --PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11235789999999999999999999999999999876
No 202
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-39 Score=324.42 Aligned_cols=258 Identities=22% Similarity=0.326 Sum_probs=197.9
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCC-EEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD-YNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~-~~~lv~e 83 (474)
++|.-..+||+|+||.||+|.. .++..||||.+..... ..+|..|+.++.+++ |+++..+.+|+.+.. ..+||+|
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~~~~LVYE 152 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLR-HPNLVKLLGYCLEGGEHRLLVYE 152 (361)
T ss_pred hCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCC-CcCcccEEEEEecCCceEEEEEE
Confidence 5677778999999999999995 5558999998776554 467999999999999 555555666666666 5999999
Q ss_pred cC-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 84 LL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~-~l~~~~~~~i~~qi~~gL~yLHs~---gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
|+ .|+|++.+..... .++|...+.|+.++|.||+|||.. .|||||||++|||+ |.+..+||+|||+|+....
T Consensus 153 ym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 153 YMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred ccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcccCCc
Confidence 99 7899999985555 899999999999999999999984 39999999999999 5899999999999965543
Q ss_pred -CCCccccccccCCCC-ccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCc---HHHHH-HHHhhcc
Q 011945 159 -TATHQHIPYRENKNL-TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT---KKQKY-EKISEKK 232 (474)
Q Consensus 159 -~~~~~~~~~~~~~~~-~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~---~~~~~-~~i~~~~ 232 (474)
.... ... .||..|+|||++..+..+.|+|||||||+|+||++|+.+........ ..... ..+....
T Consensus 230 ~~~~~--------~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~ 301 (361)
T KOG1187|consen 230 GDTSV--------STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGK 301 (361)
T ss_pred cccce--------eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcc
Confidence 2111 112 79999999999999899999999999999999999998887543111 11111 1111111
Q ss_pred ccchHH-HHh-cCCc-----HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 233 VSTSIE-ALC-RGYP-----TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 233 ~~~~~~-~l~-~~~p-----~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
....+. .+. ..++ ..+..+...|+..+|.+||++.++.+.|+.+.
T Consensus 302 ~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 302 LREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred hhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 111111 111 2233 23667788999999999999999988886553
No 203
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=334.30 Aligned_cols=241 Identities=22% Similarity=0.321 Sum_probs=203.0
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
|.-++.||.|+||.||-|++..+.+.||||.+.... .+.++..|+.+|+.|.|++.| .+.+|...+...|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPnti-eYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTI-EYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcc-cccceeeccchHHHHHH
Confidence 566788999999999999999999999999876543 345689999999999966554 55666667777899999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 84 ~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
||-|+-.|++.-..+++-+.++..|..+.+.||.|||+.+.||||||..|||++ +.+.|||+|||.|.....
T Consensus 107 YClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs---e~g~VKLaDFGSAsi~~P----- 178 (948)
T KOG0577|consen 107 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS---EPGLVKLADFGSASIMAP----- 178 (948)
T ss_pred HHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec---CCCeeeeccccchhhcCc-----
Confidence 999999999998888999999999999999999999999999999999999995 889999999999976543
Q ss_pred ccccccCCCCccCccccccccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 164 HIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~---~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
.+.|+||+.|||||+++. +.|+-|+||||||+++.||...++|+.++++... +..|.....++.-
T Consensus 179 ------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA---LYHIAQNesPtLq--- 246 (948)
T KOG0577|consen 179 ------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYHIAQNESPTLQ--- 246 (948)
T ss_pred ------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH---HHHHHhcCCCCCC---
Confidence 356899999999999874 5699999999999999999999999988765432 2233332222111
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
...++..|..|+..||.+-|.+||+.++++
T Consensus 247 s~eWS~~F~~Fvd~CLqKipqeRptse~ll 276 (948)
T KOG0577|consen 247 SNEWSDYFRNFVDSCLQKIPQERPTSEELL 276 (948)
T ss_pred CchhHHHHHHHHHHHHhhCcccCCcHHHHh
Confidence 245789999999999999999999988763
No 204
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.7e-38 Score=307.62 Aligned_cols=253 Identities=19% Similarity=0.274 Sum_probs=195.6
Q ss_pred eeeeecCceEEEEEEEcC---CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 13 RKIGSGSFGEIYLGTNIQ---TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
+.||+|+||.||+|.+.. .+..||||.+..... ...+..|+.+++.++|++++..+..+...+...+++|+|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998754 345799998754322 2457789999999987777776665555566678999988
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
+++|.+++......+++..++.++.||+.||.|||+.+|+||||||+|||++ ..+.+||+|||+++.........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~dfg~~~~~~~~~~~~-- 155 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVADFGLARDIYDKEYYS-- 155 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCccccccccCCccee--
Confidence 7899999976556678888999999999999999999999999999999994 67889999999998654322111
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCC
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 244 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 244 (474)
........++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+...... .....+
T Consensus 156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~ 227 (262)
T cd05058 156 -VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS---FDITVYLLQGRRL----LQPEYC 227 (262)
T ss_pred -ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHhcCCCC----CCCCcC
Confidence 111123456788999999998899999999999999999999 4666765432 2222222221111 112456
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011945 245 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 245 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 278 (474)
|+.+.+++..||..+|++||++.+|++.|++++.
T Consensus 228 ~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 228 PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 8899999999999999999999999999998863
No 205
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.1e-39 Score=311.31 Aligned_cols=251 Identities=20% Similarity=0.286 Sum_probs=196.6
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.++|++.++||+|+||.||+|.+..+++.||+|++..... ...+.+|+.+++.++|++++..+ .+.......+++||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~-~~~~~~~~~~lv~e 86 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYF-GSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEE-EEEEeCCEEEEEEe
Confidence 3589999999999999999999999999999998765432 23577899999999866555554 45566788899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++.. .+.+++.+++.++.||+.||.|||++||+|+||||+||+++ ..+.+||+|||++........
T Consensus 87 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06645 87 FCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITATIA- 161 (267)
T ss_pred ccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECcceeeeEccCccc-
Confidence 99 6799999874 45799999999999999999999999999999999999994 778899999999876543211
Q ss_pred cccccccCCCCccCcccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 163 QHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
......|+..|+|||++. +..++.++|||||||++|+|++|..||........ +..............
T Consensus 162 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~ 232 (267)
T cd06645 162 ------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA---LFLMTKSNFQPPKLK 232 (267)
T ss_pred ------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh---HHhhhccCCCCCccc
Confidence 123457899999999975 45588999999999999999999999976433211 111111111111111
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
....++..+.+++.+||..+|++||++++|++
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 11246789999999999999999999887753
No 206
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=7.4e-39 Score=310.92 Aligned_cols=248 Identities=23% Similarity=0.410 Sum_probs=193.3
Q ss_pred EEeeeeeecCceEEEEEEEc----CCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 10 RLGRKIGSGSFGEIYLGTNI----QTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 10 ~i~~~LG~G~fG~Vy~a~~~----~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.+.+.||.|.||.||+|.+. ..+..|+||+++.... ...+..|+++++.++| ++|..+.++.......++|+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h-~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRH-PNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSB-TTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccc-cccccccccccccccccccc
Confidence 57899999999999999987 3467899999965433 3568999999999964 55555555666666689999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||+ +++|.+++... ...+++..++.|+.||+.||.|||+++|+|+||+++|||++ .++.+||+|||++.......
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccc
Confidence 999 68999999866 56799999999999999999999999999999999999995 68899999999998763322
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.. .......+...|+|||.+.+..++.++||||||+++|||++ |+.||.+... .+....+..... ..
T Consensus 158 ~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~---~~~~~~~~~~~~----~~ 225 (259)
T PF07714_consen 158 KY-----KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN---EEIIEKLKQGQR----LP 225 (259)
T ss_dssp SE-----EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH---HHHHHHHHTTEE----TT
T ss_pred cc-----cccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccc----ce
Confidence 11 11233457789999999999889999999999999999999 7899987633 333444433222 12
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
....+|..+.++|..||..+|++||++.+|.+.|
T Consensus 226 ~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 3456899999999999999999999999998765
No 207
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9.1e-39 Score=308.45 Aligned_cols=246 Identities=20% Similarity=0.287 Sum_probs=199.1
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
.++|++.+.||+|+||.||++. .+++.||+|+.........+.+|+.+++.++|++++..+..+. . +..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~-~~~~~v~e~~ 80 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVIL-H-NGLYIVMELM 80 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEc-C-CCcEEEEECC
Confidence 4679999999999999999997 5788999999876655667899999999999777776665543 3 3368999998
Q ss_pred -CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 86 -GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 86 -g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+++|.+++.... ..+++..++.++.|++.||.|||++|++||||||+|||++ .++.+||+|||++.......
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEECCCccceeccccC---
Confidence 789999997543 3589999999999999999999999999999999999994 67899999999997643321
Q ss_pred ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.....+..|+|||.+.+..++.++|||||||++|||++ |..||...... .....+... .. .....
T Consensus 155 -------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~-~~---~~~~~ 220 (254)
T cd05083 155 -------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK---EVKECVEKG-YR---MEPPE 220 (254)
T ss_pred -------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH---HHHHHHhCC-CC---CCCCC
Confidence 12244578999999998899999999999999999997 99999775432 222222221 11 11235
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
.+|.++.+++..||+.+|++||++++|.+.|++
T Consensus 221 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 221 GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 678999999999999999999999999888753
No 208
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.3e-38 Score=310.91 Aligned_cols=254 Identities=21% Similarity=0.319 Sum_probs=201.1
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCC-----CeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCC
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 76 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~ 76 (474)
..++|.+.+.||+|+||.||+|.+... +..||+|....... ...+.+|+.+++.+.|+ ++..+..+.....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~-~i~~~~~~~~~~~ 82 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSTGQ 82 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCC-ceeEEEEEEcCCC
Confidence 356899999999999999999998644 37899998764432 23577899999999865 4555666666778
Q ss_pred EEEEEEecC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEE
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVY 146 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~---------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vk 146 (474)
..+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~---~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---EDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc---CCCCEE
Confidence 889999998 789999986422 2368889999999999999999999999999999999994 778999
Q ss_pred EEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHH
Q 011945 147 IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKY 225 (474)
Q Consensus 147 L~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~ 225 (474)
|+|||+++....... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+..
T Consensus 160 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~ 231 (277)
T cd05032 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---EEVL 231 (277)
T ss_pred ECCcccchhhccCcc-----cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---HHHH
Confidence 999999986544322 111233467889999999998889999999999999999998 9999976433 2333
Q ss_pred HHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 226 EKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 226 ~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
..+..... ..+...++.++.+++..||..+|++||++.+|.+.|+
T Consensus 232 ~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 232 KFVIDGGH----LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHhcCCC----CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 33322211 1233557899999999999999999999999988775
No 209
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5e-40 Score=301.43 Aligned_cols=265 Identities=18% Similarity=0.210 Sum_probs=202.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEE----eEeCCEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWF----GVEGDYNV 79 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~----~~~~~~~~ 79 (474)
+++|+|.++||+|||+.||++++..+++.||+|.+.... ..+...+|++..+++++++.+..+... .......|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 568999999999999999999999999999999776544 345588999999999987766655322 22445578
Q ss_pred EEEecC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 80 LVIDLL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~---~~l~~~~~~~i~~qi~~gL~yLHs~g--IiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
|++.|. .|+|.+.++... ..+++.+++.|+.+|+.||++||+.. +.||||||.|||++ +.+.++|.|||.+
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPVLMDLGSA 176 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceEEEeccCc
Confidence 888877 889999987553 35999999999999999999999998 99999999999996 5799999999998
Q ss_pred cccccCCC--ccccccccCCCCccCcccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH
Q 011945 154 KRYRDTAT--HQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 154 ~~~~~~~~--~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (474)
....-... .+.....+...-..|..|.|||.+. +...+.++|||||||+||.|+.|.-||...-.... .....+
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg-SlaLAv 255 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG-SLALAV 255 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC-eEEEee
Confidence 76543211 1111122233446799999999987 44578999999999999999999999963211000 000001
Q ss_pred hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 229 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
....+..+. ...+++.+.++|+.||+.||.+||+..+|+..++++.
T Consensus 256 ~n~q~s~P~---~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 256 QNAQISIPN---SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eccccccCC---CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111111111 1237899999999999999999999999999888764
No 210
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=312.24 Aligned_cols=268 Identities=19% Similarity=0.267 Sum_probs=217.1
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
.-++|..+++||+|.||.|-+|+.+.+++.||+|+++.+.. ...-..|.++|+..+ |+.+..+.+.++..+..|
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEE
Confidence 34689999999999999999999999999999998765432 223567888888887 556666777778888999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+||||. ||.|.-.+.. .+.|++.....+..+|+.||.|||+++||+||||.+|+|+ +++|++||+|||+++.-..
T Consensus 245 FVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhccc
Confidence 999999 8888777763 4579999999999999999999999999999999999999 6899999999999986443
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
... ..+++|||+.|+|||++....|++.+|+|.+||+||||++|++||.+.+. ...++-|....+
T Consensus 321 ~g~-------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh---~kLFeLIl~ed~----- 385 (516)
T KOG0690|consen 321 YGD-------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH---EKLFELILMEDL----- 385 (516)
T ss_pred ccc-------eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch---hHHHHHHHhhhc-----
Confidence 332 24678999999999999999999999999999999999999999987543 233333332222
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccccccccccccc
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKP--DYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ 299 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RP--t~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~ 299 (474)
.++..++++.+.|+.-+|.+||.+|. ..++.+++.++-| ...++|+..-.....
T Consensus 386 kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~F-------F~~v~W~~~~~Kki~ 441 (516)
T KOG0690|consen 386 KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRF-------FASVDWEATYRKKIE 441 (516)
T ss_pred cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhh-------hccCCHHHHHHhccC
Confidence 23467889999999999999999996 3456666666554 445789876544443
No 211
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2e-38 Score=319.62 Aligned_cols=258 Identities=20% Similarity=0.214 Sum_probs=197.7
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeE----eCCE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGV----EGDY 77 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~----~~~~ 77 (474)
++++|++.++||+|+||.||+|.+..+++.||||++.... ....+..|+.+++.++|.+++..+..+.. ....
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 6789999999999999999999999999999999875322 23457789999999997766665544332 2245
Q ss_pred EEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 78 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
.+++||+++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++....
T Consensus 83 ~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 83 VYIVQELMETDLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECcccceeecc
Confidence 79999999999998886 4579999999999999999999999999999999999999 477899999999998764
Q ss_pred cCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc-----
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----- 231 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~----- 231 (474)
....... ......||..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.........+..+...
T Consensus 158 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 158 PEHDHTG----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred ccccccC----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 4322111 1234578999999998765 46899999999999999999999999764321111111110000
Q ss_pred ------------------cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 232 ------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 232 ------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
........+...+++++.++|.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~ 291 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA 291 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0011112233456788999999999999999999877644
No 212
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.4e-38 Score=311.86 Aligned_cols=250 Identities=20% Similarity=0.346 Sum_probs=198.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeE------eCCEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGV------EGDYN 78 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~------~~~~~ 78 (474)
.+.|++.+.||.|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+.+|+++..+..++. .....
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 468999999999999999999999999999999876543 33568889999999976677766655543 35678
Q ss_pred EEEEecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 79 VLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
+++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||++...
T Consensus 95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~---~~~~~~l~dfg~~~~~ 171 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQL 171 (282)
T ss_pred EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCcchhhh
Confidence 9999999 66999998753 34588999999999999999999999999999999999994 6788999999998765
Q ss_pred ccCCCccccccccCCCCccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 231 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~ 231 (474)
..... ......|+..|+|||++. +..++.++|||||||++|||++|..||..... ...+..+...
T Consensus 172 ~~~~~-------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~---~~~~~~~~~~ 241 (282)
T cd06636 172 DRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP---MRALFLIPRN 241 (282)
T ss_pred hcccc-------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH---HhhhhhHhhC
Confidence 43221 123457899999999986 34578899999999999999999999976432 1222222211
Q ss_pred cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 232 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.. .......++.++.++|.+||..||.+||++.+|++
T Consensus 242 ~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 242 PP---PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CC---CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 11 11123467899999999999999999999888753
No 213
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.3e-38 Score=307.78 Aligned_cols=251 Identities=20% Similarity=0.220 Sum_probs=195.2
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeC--CEEEEEEe
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEG--DYNVLVID 83 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~--~~~~lv~e 83 (474)
|++.++||+|+||.||+|.+..+++.||||++..... ......|+.++..+.+|+++..+..++.+. ...+++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 7889999999999999999999999999998764321 223457888899887566666666555555 78899999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 84 ~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
|+.++|.+.+......+++..++.++.||+.||.|||++||+||||||+||+++ . +.+||+|||++........
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~~~~~~~~-- 154 (282)
T cd07831 81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCRGIYSKPP-- 154 (282)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEecccccccccCCC--
Confidence 998899998876556799999999999999999999999999999999999995 4 9999999999986643322
Q ss_pred ccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc----------
Q 011945 164 HIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK---------- 232 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~---------- 232 (474)
.....++..|+|||++.+ ..++.++|||||||++|||++|..||.+....+....+..+....
T Consensus 155 ------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 155 ------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred ------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcc
Confidence 123467899999997654 457899999999999999999999997744322111111111000
Q ss_pred -----------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 -----------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 -----------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
....+..+...++.++.++|.+||..+|++||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 001122333467899999999999999999999887753
No 214
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=6.2e-38 Score=307.31 Aligned_cols=253 Identities=21% Similarity=0.264 Sum_probs=195.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+..|+.+++.++|.+.+ .+..+...+...+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLV-NLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEe-eeeeEEeeCCEEEEEE
Confidence 57999999999999999999999899999999875432 224578899999999865544 4455566778889999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||+.+.+.+.+......+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFARILTGPGDD 156 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEECccccceecCCCccc
Confidence 9995554444433455799999999999999999999999999999999999994 6789999999999876543211
Q ss_pred cccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc---------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--------- 232 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--------- 232 (474)
.....++..|+|||++.+ ..++.++|||||||++|||++|..||.+....+....+.......
T Consensus 157 -------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 157 -------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred -------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcc
Confidence 123467889999999876 457899999999999999999999998755432222211111000
Q ss_pred --------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 --------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 --------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
...........++..+.+|+.+||..+|++||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil 281 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELL 281 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHh
Confidence 00112223356789999999999999999999988775
No 215
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.7e-38 Score=306.01 Aligned_cols=245 Identities=27% Similarity=0.389 Sum_probs=200.1
Q ss_pred eeeeecCceEEEEEEEcCC---CeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 13 RKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~---~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
++||+|+||.||+|.+... +..|+||++..... ...+..|++++..+.| +++..+..+.......+++|||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGH-PNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCC-CChheeeeeecCCCceEEEEEecc
Confidence 4799999999999998765 88999999876544 3568899999999994 45555555555688889999999
Q ss_pred CCCHHHHHHHc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 86 GPSLEDLFNFC--------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 86 g~sL~~li~~~--------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEEEcccccccccc
Confidence 99999999865 46799999999999999999999999999999999999994 67899999999998765
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
.... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+....
T Consensus 157 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~---- 224 (262)
T cd00192 157 DDDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEVLEYLRKGY---- 224 (262)
T ss_pred cccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCC----
Confidence 5332 112234567899999999998889999999999999999999 6999987633 23333333211
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
.......+|.++.+++..||..+|++||++.++++.|
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 225 RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1122356789999999999999999999999998776
No 216
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.9e-38 Score=306.39 Aligned_cols=247 Identities=21% Similarity=0.330 Sum_probs=200.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
.++|++.+.||.|+||.||+|.+ .++.||||.+..... ...+..|+.+++.++|.+++..+. +.......+++||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~-~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLG-VVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEE-EEcCCCCeEEEEEe
Confidence 56899999999999999999985 488999999876544 457889999999998766555444 44457788999999
Q ss_pred C-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 85 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 85 ~-g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
+ +++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++ .++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCCEEEcccccccccccccc-
Confidence 9 689999997543 2689999999999999999999999999999999999994 778999999999987633221
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
...++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+..... ....
T Consensus 158 ---------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~ 221 (256)
T cd05039 158 ---------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPHVEKGYR----MEAP 221 (256)
T ss_pred ---------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHhcCCC----CCCc
Confidence 2245678999999998889999999999999999997 9999976532 222222222111 1223
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
..+|+++.+++.+||..+|++||++.+|++.|+.
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 5678999999999999999999999999988864
No 217
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.3e-38 Score=312.37 Aligned_cols=250 Identities=18% Similarity=0.280 Sum_probs=196.9
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
..+.|+++++||.|+||.||+|.+..+++.|++|++..... ...+..|+.+++.++|.+++. +..++..+...+++|
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~ 88 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVK-LLGAFYWDGKLWIMI 88 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEee-eEEEEEeCCeEEEEE
Confidence 45679999999999999999999999999999999865432 245788999999999665544 444455667889999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|..++......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++........
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEEEccCccceecccccc
Confidence 999 7788888765566799999999999999999999999999999999999994 678999999999875433211
Q ss_pred ccccccccCCCCccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
......++..|+|||++. ...++.++|||||||++|||++|..||..... ...+.++..... .
T Consensus 166 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~--~ 233 (292)
T cd06644 166 -------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEP--P 233 (292)
T ss_pred -------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH---HHHHHHHhcCCC--c
Confidence 113456889999999985 34478899999999999999999999976432 222222222111 1
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.......++.++.++|.+||..+|++||++++++
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 267 (292)
T cd06644 234 TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLL 267 (292)
T ss_pred cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 1112345778999999999999999999987774
No 218
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.6e-38 Score=309.44 Aligned_cols=253 Identities=19% Similarity=0.309 Sum_probs=196.3
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEe-----EeCCE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFG-----VEGDY 77 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~-----~~~~~ 77 (474)
...++|++.+.||+|+||.||+|.+..+++.||+|+..... ....+..|+.+++.+..|+++..+..++ ..+..
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 94 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ 94 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence 35679999999999999999999999999999999876432 2356888999999996455555554433 24567
Q ss_pred EEEEEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 78 NVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
.+++|||+ +++|.+++.. ....+++..++.++.|++.||.|||+++|+||||||+||+++ ..+.+||+|||++
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~ 171 (286)
T cd06638 95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGGVKLVDFGVS 171 (286)
T ss_pred EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCCEEEccCCce
Confidence 89999998 8899998753 235689999999999999999999999999999999999994 6778999999999
Q ss_pred cccccCCCccccccccCCCCccCccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-----~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (474)
+....... ......|+..|+|||++.. ..++.++|||||||++|||++|+.||...... ..+..+
T Consensus 172 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~---~~~~~~ 241 (286)
T cd06638 172 AQLTSTRL-------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM---RALFKI 241 (286)
T ss_pred eecccCCC-------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh---HHHhhc
Confidence 86643221 1123468999999999853 44789999999999999999999999765432 122221
Q ss_pred hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 229 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.... .........++.++.+++.+||..||++||++.+|++
T Consensus 242 ~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 242 PRNP--PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred cccC--CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 1111 0111122346789999999999999999999888754
No 219
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.5e-38 Score=312.88 Aligned_cols=256 Identities=18% Similarity=0.174 Sum_probs=198.5
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeE-eCCEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYNV 79 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~-~~~~~~ 79 (474)
..++|++.++||.|+||.||+|.+..+++.||+|++..... ...+.+|+.+++.++|.+++..+..+.. .....+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 35689999999999999999999999999999998764432 2246689999999998776666555433 335689
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 80 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 80 lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
+||||++++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++ ..+.+||+|||++..+...
T Consensus 85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccceeeecCCc
Confidence 9999999999999986667899999999999999999999999999999999999994 7789999999999876543
Q ss_pred CCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc-----
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV----- 233 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~----- 233 (474)
... .....++..|+|||++.+ ..++.++|||||||++|||++|..||.+.........+........
T Consensus 162 ~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07845 162 AKP-------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWP 234 (309)
T ss_pred cCC-------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhch
Confidence 211 122345788999999876 4589999999999999999999999986543222222211110000
Q ss_pred -----------------cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 234 -----------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 234 -----------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
..........+++++.++|..||..||++||++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il 288 (309)
T cd07845 235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEAL 288 (309)
T ss_pred hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 0001111123578899999999999999999988764
No 220
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.2e-38 Score=310.82 Aligned_cols=261 Identities=21% Similarity=0.230 Sum_probs=198.6
Q ss_pred CCcEEEeeeeeecCceEEEEEE----EcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEe-EeCCEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGT----NIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFG-VEGDYN 78 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~----~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~-~~~~~~ 78 (474)
.++|++++.||+|+||.||+|. +..+++.||||.+..... ...+.+|+++++.++|++++..+..+. ......
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 3589999999999999999997 345788999998765432 235789999999998766655554332 344568
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+++|||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCccccccc
Confidence 8999999 899999997655679999999999999999999999999999999999999 467899999999998765
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH------------HHHH
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK------------KQKY 225 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~------------~~~~ 225 (474)
...... .......++..|+|||++.+..++.++|||||||++|||++|..|+......-. ...+
T Consensus 160 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 160 QDKEYY----KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred CCCcce----eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 432210 001122345679999999998999999999999999999998877654221100 0000
Q ss_pred HHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 226 EKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 226 ~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
..+..... .......++.++.+|+.+||..+|++||++.+|.+.|+.+
T Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNG---RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCC---cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000 0011246789999999999999999999999999988764
No 221
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.5e-38 Score=305.94 Aligned_cols=247 Identities=22% Similarity=0.303 Sum_probs=195.2
Q ss_pred eeeeecCceEEEEEEEcCCC---eEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 13 RKIGSGSFGEIYLGTNIQTN---EEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~---~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
++||+|+||.||+|.+...+ ..||+|.+..... ...+..|+.+++.+.|.+++..+. +.. ....+++|||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~-~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEE-EEc-CCceEEEEEeCC
Confidence 47999999999999876655 7899998765543 346888999999998766555544 333 44578999998
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
+++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||+++........
T Consensus 79 ~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df~~~~~~~~~~~~--- 151 (257)
T cd05060 79 LGPLLKYLKKR-REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDFGMSRALGAGSDY--- 151 (257)
T ss_pred CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccccccceeecCCcc---
Confidence 78999999743 3799999999999999999999999999999999999994 7789999999999876543321
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCC
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 244 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 244 (474)
+.......++..|+|||.+.+..++.++|||||||++|+|++ |..||..... .+....+..... ......+
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~~~~ 223 (257)
T cd05060 152 -YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLESGER----LPRPEEC 223 (257)
T ss_pred -cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHHcCCc----CCCCCCC
Confidence 111122334678999999999899999999999999999998 9999976543 223333322221 1223567
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 245 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 245 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
+..+.+++.+||..+|++||++.+|.+.|+++
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 89999999999999999999999999999875
No 222
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.9e-38 Score=305.90 Aligned_cols=251 Identities=24% Similarity=0.371 Sum_probs=199.8
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc-----------hHHHHHHHHHHHhcCCCCCceeEEEeEeCC
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----------PQLQYEAKLYKILQGGTGIPNLRWFGVEGD 76 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----------~~l~~E~~il~~l~~~~~i~~l~~~~~~~~ 76 (474)
+|.+...||.|+||.||+|.+..+++.||+|.+...... +.+..|+.+++.++|++ +..+..++....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN-IVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCC-eeeEEEEEEeCC
Confidence 588999999999999999999889999999977543211 34778999999998655 445555667778
Q ss_pred EEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
+.+++|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||++ +.++.++|+|||+++.
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKK 155 (267)
T ss_pred ccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCcc
Confidence 889999998 7899999974 3578999999999999999999999999999999999999 4778999999999987
Q ss_pred cccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
......... .........|+..|+|||.+.+..++.++|||||||++|+|++|..||.+... ...+..+...
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~---- 227 (267)
T cd06628 156 LEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIFKIGEN---- 227 (267)
T ss_pred cccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH---HHHHHHHhcc----
Confidence 753221110 01112345689999999999998899999999999999999999999986432 2222222221
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..+.+...++.++.++|.+||+.||++||++.+|++
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 112234567899999999999999999999888754
No 223
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=8.6e-39 Score=314.12 Aligned_cols=259 Identities=20% Similarity=0.247 Sum_probs=199.4
Q ss_pred CcEEEeeeeeecCceEEEEEEE----cCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEe-CCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTN----IQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVE-GDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~----~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~-~~~~ 78 (474)
.-|+++++||+|+||.||+|.. ..++..||+|.+..... ...+.+|+.+++.+.|++++..+..+... ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3479999999999999999984 45688999998764322 24588999999999876666655544443 4678
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+++|||+ |++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ .++.++|+|||++..+.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECCCccccccc
Confidence 9999999 8999999975555689999999999999999999999999999999999995 67889999999998765
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----------C-cHHHHH
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA-----------G-TKKQKY 225 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~-----------~-~~~~~~ 225 (474)
...... .......++..|+|||++.+..++.++|||||||++|||+++..|+..... . ......
T Consensus 161 ~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 161 TDKEYY----TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cCccce----eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 432211 112345678889999999988899999999999999999998776532110 0 000011
Q ss_pred HHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 226 EKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 226 ~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
..+.... .......++.++.+|+.+||+.+|++||++.++++.|+.+
T Consensus 237 ~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 237 RVLEEGK----RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHcCc----cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111111 0112346789999999999999999999999999998876
No 224
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-40 Score=303.87 Aligned_cols=250 Identities=20% Similarity=0.244 Sum_probs=213.6
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----------chHHHHHHHHHHHhcCCCCCceeEEEeEe
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------HPQLQYEAKLYKILQGGTGIPNLRWFGVE 74 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~l~~E~~il~~l~~~~~i~~l~~~~~~ 74 (474)
+-++|.-.+.||.|..++|-+|.++.++.++|+|++..... .+.-..|+.||+++.+|++|..+..+...
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 34678888999999999999999999999999998765321 12356799999999999999999999999
Q ss_pred CCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 75 GDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 75 ~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
+.+.++|+|+| .|.|.|++. ..-.++++....|+.|++.|++|||.++||||||||+|||+ +++.++||+|||+|
T Consensus 95 ~sF~FlVFdl~prGELFDyLt-s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa 170 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLT-SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFA 170 (411)
T ss_pred cchhhhhhhhcccchHHHHhh-hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEecccee
Confidence 99999999999 888999997 34579999999999999999999999999999999999999 58899999999999
Q ss_pred cccccCCCccccccccCCCCccCccccccccccC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHH
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLG------IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK 227 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~------~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 227 (474)
+.+..... ...+|||+.|+|||.+.. ..|+..+|+|++|||||-||.|..||.. .....++..
T Consensus 171 ~~l~~Gek--------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH---RkQmlMLR~ 239 (411)
T KOG0599|consen 171 CQLEPGEK--------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH---RKQMLMLRM 239 (411)
T ss_pred eccCCchh--------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH---HHHHHHHHH
Confidence 98766543 245799999999998863 2488999999999999999999999975 233455667
Q ss_pred HhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 228 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 228 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
|++.+.....++ +.+++...++||.+||+.||.+|.|+++++
T Consensus 240 ImeGkyqF~spe-Wadis~~~KdLIsrlLqVdp~~Ritake~L 281 (411)
T KOG0599|consen 240 IMEGKYQFRSPE-WADISATVKDLISRLLQVDPTKRITAKEAL 281 (411)
T ss_pred HHhcccccCCcc-hhhccccHHHHHHHHHeeCchhcccHHHHh
Confidence 777776554433 467889999999999999999999988764
No 225
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.9e-38 Score=305.67 Aligned_cols=249 Identities=21% Similarity=0.328 Sum_probs=201.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
++|++.++||.|+||.||+|.+..+++.|++|.+........+.+|+++++.++|.+++ .+..+.......++++|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~-~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIV-KYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEe-eeeeeeecCCcEEEEEecCC
Confidence 68999999999999999999998889999999987655566799999999999755554 4555556668889999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
+++|.+++......+++..++.++.||+.||.|||+.||+|+||+|+||+++ .++.++|+|||++........
T Consensus 82 ~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l~dfg~~~~~~~~~~---- 154 (256)
T cd06612 82 AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLTDTMA---- 154 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEEcccccchhcccCcc----
Confidence 7899999986677899999999999999999999999999999999999994 678899999999987654321
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCc
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 245 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 245 (474)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||....... ....+..... ........++
T Consensus 155 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~ 226 (256)
T cd06612 155 ---KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR---AIFMIPNKPP--PTLSDPEKWS 226 (256)
T ss_pred ---ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh---hhhhhccCCC--CCCCchhhcC
Confidence 1123468899999999999999999999999999999999999998643321 1111111110 0011123467
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 246 TEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 246 ~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.++.+++..||+.+|++||++.++++
T Consensus 227 ~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 227 PEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 89999999999999999999887754
No 226
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.2e-38 Score=305.44 Aligned_cols=254 Identities=23% Similarity=0.381 Sum_probs=203.4
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+..++|.+.++||.|+||.||+|.+. .++.||||.+.... ....+..|+.+++.++|.+ +..+..+.......+++|
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDK-LVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCC-EeeeeeeeecCCceEEEE
Confidence 45688999999999999999999974 56789999876543 3457899999999999655 555555566667789999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|++ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++..+....
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccceeccchh
Confidence 998 78999999743 34699999999999999999999999999999999999994 67899999999998765321
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
. .......++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+... ...+..+..... ..
T Consensus 158 ~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~~~~~~~~----~~ 224 (261)
T cd05034 158 Y------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---REVLEQVERGYR----MP 224 (261)
T ss_pred h------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCC----CC
Confidence 1 11122345678999999999889999999999999999998 9999976533 233333322111 11
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
....+|.++.+++.+||..+|++||+++++.+.|+.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 225 RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 224568999999999999999999999999988864
No 227
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-38 Score=311.14 Aligned_cols=248 Identities=17% Similarity=0.271 Sum_probs=196.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|++++.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+.+++.+.|++++..+. ++......+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~-~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYG-AFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhh-heecCCeEEEEEe
Confidence 478999999999999999999988999999998765322 246888999999998655555444 5556778899999
Q ss_pred cC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 84 LL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 84 ~~-g~sL~~li~~~--~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|+ +++|..++... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++ .++.+||+|||++..+...
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeecCCcccccCC
Confidence 99 78998888743 2369999999999999999999997 5999999999999995 6789999999999765432
Q ss_pred CCccccccccCCCCccCccccccccccCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGI------EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~------~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (474)
.. ....++..|+|||++.+. .++.++|||||||++|+|++|..||...........+..+.....
T Consensus 157 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd06622 157 LA---------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP 227 (286)
T ss_pred cc---------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC
Confidence 21 234688899999998654 358899999999999999999999976443332233333322221
Q ss_pred cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 234 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 234 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..+...++.++.++|..||..+|++||+++++++
T Consensus 228 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 228 ----PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ----CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 1233457899999999999999999999887754
No 228
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7.3e-38 Score=306.80 Aligned_cols=254 Identities=20% Similarity=0.258 Sum_probs=199.9
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++.+.||.|+||.||+|.+..+++.||||++..... ...+..|+.+++.++|++ +..+..+...+...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY-VVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCC-CcceeeEEecCCeeEEEec
Confidence 58999999999999999999998999999998765432 346889999999998555 4455555566888999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 84 ~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+++++|.+++......+++..++.++.||+.||.|||++||+|+||||+||+++ ..+.++|+|||++........
T Consensus 80 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---~~~~~~l~dfg~~~~~~~~~~-- 154 (286)
T cd07832 80 YMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---ADGVLKIADFGLARLFSEEEP-- 154 (286)
T ss_pred ccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---CCCcEEEeeeeecccccCCCC--
Confidence 999999999986667799999999999999999999999999999999999994 678999999999987654321
Q ss_pred ccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc-----------
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----------- 231 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~----------- 231 (474)
.......|+..|+|||++.+.. ++.++|||||||++|||++|..||.+................
T Consensus 155 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 155 ----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred ----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence 1112347899999999987654 689999999999999999998888764332111111110000
Q ss_pred -----------cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 232 -----------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 232 -----------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
........+...++.++.++|..||..+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0001122334567899999999999999999999887743
No 229
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=8.6e-38 Score=307.72 Aligned_cols=253 Identities=21% Similarity=0.266 Sum_probs=196.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.++|++.+.||.|+||.||+|.+..+++.||||.+..... ...+.+|+.+++.++|.+ |..+..+...+...++||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHAN-IVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcc-eeeEEEEEecCCeEEEEE
Confidence 4789999999999999999999988999999998754322 234678999999998654 555656667788999999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||++++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~- 158 (291)
T cd07844 83 EYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAKSVPSK- 158 (291)
T ss_pred ecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECccccccccCCCCc-
Confidence 999889999987666679999999999999999999999999999999999999 4778899999999875432111
Q ss_pred cccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh---cc------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE---KK------ 232 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~---~~------ 232 (474)
......++..|+|||++.+ ..++.++|||||||++|+|++|..||.+... ....+..+.. ..
T Consensus 159 ------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTD--VEDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred ------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHhcCCCChhhhh
Confidence 1122356889999999876 4589999999999999999999999976432 1111111110 00
Q ss_pred ----------------ccchHHHHhcCCc--HHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 ----------------VSTSIEALCRGYP--TEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 ----------------~~~~~~~l~~~~p--~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
...........+. .++.+++.+||..+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 231 GVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0011111122334 78899999999999999999887653
No 230
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.4e-38 Score=304.89 Aligned_cols=253 Identities=20% Similarity=0.348 Sum_probs=200.5
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+..++|++.++||+|+||.||++.+ ..+..||+|.+..... ...+.+|+.+++.++|.+++..+..+. . ...+++|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~-~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~-~~~~~v~ 79 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-K-EPIYIIT 79 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEe-cCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEc-C-CCeEEEE
Confidence 4578999999999999999999985 4556799998765432 346889999999998766666554443 3 6678999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||+ +++|.+++... ...+++..++.++.||+.||.|||+.|++|+||||+||+++ ..+.+||+|||++..+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCCcceeeccCCC
Confidence 999 78999999743 34588999999999999999999999999999999999994 77899999999997664322
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.. ......++..|+|||++.+..++.++|||||||++|++++ |..||.+.... .....+..... ..
T Consensus 157 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~~~~~----~~ 223 (260)
T cd05073 157 YT------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRALERGYR----MP 223 (260)
T ss_pred cc------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHhCCCC----CC
Confidence 11 1122356678999999998889999999999999999998 99999875432 22222222111 11
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 275 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 275 (474)
....++.++.+++.+||..+|++||++.++.++|+.
T Consensus 224 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 235678999999999999999999999999998875
No 231
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.5e-38 Score=310.32 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=199.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEc-----CCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
..+|.+.++||+|+||.||++... .++..||+|.+..... ...+..|+++++.++|.+ |..+..++..+...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~ 82 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQH-IVRFYGVCTEGRPL 82 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCC-CceEEEEEecCCce
Confidence 457899999999999999999743 3466899998754332 346889999999998655 44455566777788
Q ss_pred EEEEecC-CCCHHHHHHHcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCC
Q 011945 79 VLVIDLL-GPSLEDLFNFCS--------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 143 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~--------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~ 143 (474)
+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ +++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~---~~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG---QGL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc---CCC
Confidence 9999998 889999987432 2488999999999999999999999999999999999994 678
Q ss_pred eEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHH
Q 011945 144 QVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKK 222 (474)
Q Consensus 144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~ 222 (474)
.+||+|||++........ +.......++..|+|||++.+..++.++|||||||++|||++ |..||..... .
T Consensus 160 ~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~ 231 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN---T 231 (280)
T ss_pred CEEECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH---H
Confidence 999999999976543221 111233456789999999999999999999999999999998 9999976433 2
Q ss_pred HHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 223 QKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 223 ~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
..+..+...... .....+|+.+.+++.+||..||++||++.+|.+.|.
T Consensus 232 ~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 232 EAIECITQGREL----ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHcCccC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 223322222111 123467899999999999999999999999988775
No 232
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.5e-38 Score=308.58 Aligned_cols=247 Identities=20% Similarity=0.272 Sum_probs=194.8
Q ss_pred eeeeecCceEEEEEEEcCCCe--EEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNE--EVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~--~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|.+..++. .+++|.+.... ....+..|+.++.++.+|+++..+..++......+++|||+ +
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999887775 46888765322 22457889999999976777777777777777889999998 7
Q ss_pred CCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecC
Q 011945 87 PSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 151 (474)
Q Consensus 87 ~sL~~li~~~~---------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFG 151 (474)
++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECCCC
Confidence 89999986422 247899999999999999999999999999999999999 478899999999
Q ss_pred CccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhh
Q 011945 152 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISE 230 (474)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 230 (474)
++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||.+... ...+..+..
T Consensus 158 l~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---~~~~~~~~~ 226 (270)
T cd05047 158 LSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYEKLPQ 226 (270)
T ss_pred Cccccchhh--------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH---HHHHHHHhC
Confidence 986322110 0112234678999999998889999999999999999997 9999976432 222332222
Q ss_pred ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 231 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 231 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
... ......++.++.+++.+||..+|.+||++.+++..|+.++
T Consensus 227 ~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 GYR----LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCC----CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111 1122456789999999999999999999999999998876
No 233
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7e-38 Score=310.04 Aligned_cols=248 Identities=21% Similarity=0.334 Sum_probs=198.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
..+|++.+.||+|+||.||+|.+..+++.|++|.+..... ...+..|+.+++.+.|.+.+..+ .++..+...++|||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~-~~~~~~~~~~lv~e 97 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL-DSYLVGDELWVVME 97 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEE-EEEEeCCEEEEeec
Confidence 4689999999999999999999999999999998765432 34678899999998866555544 45556778999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++. ...+++.+++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++.........
T Consensus 98 ~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 98 YLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred ccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEECccccchhccccccc
Confidence 99 889999986 34689999999999999999999999999999999999994 6788999999998765432211
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.....|++.|+|||.+.+..++.++|||||||++|+|++|+.||...... ...+. +..... . ......
T Consensus 173 -------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~--~~~~~-~~~~~~-~-~~~~~~ 240 (296)
T cd06654 173 -------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RALYL-IATNGT-P-ELQNPE 240 (296)
T ss_pred -------cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH--HhHHH-HhcCCC-C-CCCCcc
Confidence 12347899999999999988999999999999999999999999764331 11111 111111 0 111234
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.++..+.+++.+||..+|++||++.+|++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 57889999999999999999999887754
No 234
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.2e-38 Score=305.91 Aligned_cols=256 Identities=21% Similarity=0.327 Sum_probs=203.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCC---CeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
.++|.+.++||.|+||.||+|.+... ...|+||....... .+.+..|+.+++.+.|.+++..+..+ .. ...+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-~~-~~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVI-TE-NPVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEE-cC-CCcE
Confidence 45799999999999999999997544 34689998765432 23588899999999977666655443 33 4467
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
++||++ +++|.+++......+++..++.++.||+.||.|||++|++|+||||+|||++ ..+.+||+|||+++....
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCceeeeccc
Confidence 899998 8899999986555799999999999999999999999999999999999995 678999999999986654
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
..... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.... .....+......
T Consensus 160 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~~~~~~~--- 227 (270)
T cd05056 160 ESYYK------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---DVIGRIENGERL--- 227 (270)
T ss_pred cccee------cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHcCCcC---
Confidence 32111 122345578999999988889999999999999999986 99999875432 222333222111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
.....+|.++.+++.+||..+|++||++.++++.|+++..+
T Consensus 228 -~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 23457889999999999999999999999999999988654
No 235
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.8e-38 Score=312.08 Aligned_cols=252 Identities=16% Similarity=0.269 Sum_probs=196.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|...++||+|+||.||++.+..+++.||||.+..... ...+..|+.++.++..++++..+..+...+...+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 467788999999999999999999999999998765432 33578899999999755666666666666778899999
Q ss_pred cCCCCHHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 84 LLGPSLEDLFNF----CSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 84 ~~g~sL~~li~~----~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+++.+|.++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++ ..+.+||+|||++..+..
T Consensus 84 ~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCcEEEeecchhHHhcc
Confidence 998888776542 23569999999999999999999997 5999999999999994 678899999999976544
Q ss_pred CCCccccccccCCCCccCccccccccccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~---~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
... .....|+..|+|||++.+. .++.++|||||||++|||++|+.||.... ...+.+.++.......
T Consensus 161 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~ 230 (288)
T cd06616 161 SIA--------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPPI 230 (288)
T ss_pred CCc--------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCCc
Confidence 321 1233688999999999876 68999999999999999999999997643 1222222222211111
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
........++.++.+|+..||..+|++||++++|++
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111112357899999999999999999999887743
No 236
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=9.2e-38 Score=308.56 Aligned_cols=253 Identities=19% Similarity=0.220 Sum_probs=196.1
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc-------hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-------PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-------~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
+|++.+.||.|+||.||+|.+..+++.||||.+...... ..+..|+.+++.++|.+++..+. +.......++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~-~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLD-VFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhh-eeecCCEEEE
Confidence 589999999999999999999889999999987654322 34678999999999665555554 4455788999
Q ss_pred EEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 81 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 81 v~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||||++++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||++ .++.++|+|||++.......
T Consensus 80 v~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 80 VFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred EEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEccceeeeeccCCC
Confidence 999999999999975444799999999999999999999999999999999999994 67899999999998765432
Q ss_pred CccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc-------
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------- 232 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~------- 232 (474)
.. .....++..|+|||.+.+ ..++.++|||||||++|||++|..||.+.................
T Consensus 157 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 157 RK-------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred cc-------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhh
Confidence 11 122356889999999865 457899999999999999999988887644322111111110000
Q ss_pred -------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 -------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 -------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.......+...++.++.++|..||..+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 011112223456789999999999999999999887754
No 237
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.7e-38 Score=319.09 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=196.4
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEe-----
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 74 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~----- 74 (474)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|.+++..+..+...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 46789999999999999999999999999999999875421 223577899999999987777766655432
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
....|+||||++++|.+.+.. .+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 166 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCccce
Confidence 245799999999999998863 28999999999999999999999999999999999999 477899999999998
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
....... .....++..|+|||++.+..++.++|||||||++|+|++|+.||...+. ...+.++......
T Consensus 167 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~---~~~~~~~~~~~~~ 235 (353)
T cd07850 167 TAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH---IDQWNKIIEQLGT 235 (353)
T ss_pred eCCCCCC--------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH---HHHHHHHHHhcCC
Confidence 6543221 1234688999999999999999999999999999999999999976432 1112221110000
Q ss_pred -------------------------chHHHH-------------hcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 235 -------------------------TSIEAL-------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 235 -------------------------~~~~~l-------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.....+ ....+.++.++|.+||..||++||++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL 309 (353)
T cd07850 236 PSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDAL 309 (353)
T ss_pred CCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHh
Confidence 000000 113466789999999999999999987764
No 238
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=4.9e-38 Score=312.07 Aligned_cols=259 Identities=19% Similarity=0.253 Sum_probs=201.7
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCe----EEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCC
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGD 76 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~ 76 (474)
.-.++|++.+.||+|+||.||+|.+..+++ .||+|++...... ..+..|+.+++.+.|++++..+..+. ..
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-~~- 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SP- 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc-CC-
Confidence 345789999999999999999999877776 5788877654332 25778999999998766666655443 33
Q ss_pred EEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
..+++++++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---SPNHVKITDFGLARL 158 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---CCCceEEcccccccc
Confidence 356777777 7899999886666799999999999999999999999999999999999994 677899999999987
Q ss_pred cccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
+....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+..... +..+......
T Consensus 159 ~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~----~~~~~~~~~~ 229 (303)
T cd05110 159 LEGDEKEY-----NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE----IPDLLEKGER 229 (303)
T ss_pred ccCccccc-----ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHHCCCC
Confidence 65332210 1123346788999999999999999999999999999997 999997753221 2222221111
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
. .....++..+.+++..||..+|++||++.+|.+.|+++...
T Consensus 230 ~---~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 230 L---PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1 11245678999999999999999999999999999987643
No 239
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.8e-38 Score=309.96 Aligned_cols=253 Identities=23% Similarity=0.353 Sum_probs=199.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
.++|++.+.||.|+||.||+|.+.. ++..||||++..... ...+.+|+.+++.+.|++ +..+..++..+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~-iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPN-IVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCc-hheEEEEEcCCCc
Confidence 4679999999999999999998743 578999998765432 345888999999998654 5555556666777
Q ss_pred EEEEEecC-CCCHHHHHHHcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEE
Q 011945 78 NVLVIDLL-GPSLEDLFNFCS---------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFL 135 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~---------------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NIL 135 (474)
.+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 89999998 679999986321 24788899999999999999999999999999999999
Q ss_pred eeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 011945 136 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQ 214 (474)
Q Consensus 136 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~ 214 (474)
++ .++.++|+|||++..+..... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 163 ~~---~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 163 VG---ENMVVKIADFGLSRNIYSADY-----YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred ec---CCCceEECccccceecccCcc-----ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 94 778999999999876543221 111122345678999999998899999999999999999997 889997
Q ss_pred CCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 215 GLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
+... .+.+..+...... .....++.++.+++.+||+.+|++||++.+|.+.|+
T Consensus 235 ~~~~---~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 235 GMAH---EEVIYYVRDGNVL----SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCH---HHHHHHHhcCCCC----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 6543 2333333222211 123467899999999999999999999999998876
No 240
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=7.2e-38 Score=310.55 Aligned_cols=263 Identities=22% Similarity=0.235 Sum_probs=200.2
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeE-------
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGV------- 73 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~------- 73 (474)
..++|++.++||.|+||.||+|.+..+++.||||++..... ...+.+|+++++.++|++++..+..+..
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 35799999999999999999999999999999998754322 2357889999999998777666544432
Q ss_pred eCCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 74 EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 74 ~~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
.....+++|+|++.+|.+.+......+++..++.++.||+.||.|||++||+|+||||+|||+ +.++.++|+|||++
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~ 162 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFGLA 162 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCccc
Confidence 234579999999999998887556679999999999999999999999999999999999999 47889999999999
Q ss_pred cccccCCCcccc----ccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH
Q 011945 154 KRYRDTATHQHI----PYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 154 ~~~~~~~~~~~~----~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (474)
............ .........++..|+|||++.+. .++.++|||||||++|||++|+.||.+.......+.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~ 242 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL 242 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 866543221110 01112344678899999988764 4789999999999999999999999865443222222211
Q ss_pred hhc----------------------cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 229 SEK----------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 229 ~~~----------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
... ............+.+.+.++|.+||..||++||++.+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 110 011111222234567899999999999999999987764
No 241
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.1e-38 Score=308.82 Aligned_cols=247 Identities=18% Similarity=0.275 Sum_probs=195.1
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
-|++.+.||.|+||.||+|.+..++..|++|.+..... ...+..|+++++.+.|.+++.. ..++..+...+++|||+
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~-~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL-LDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeE-EEEEeeCCEEEEEEEec
Confidence 37889999999999999999999999999998765432 2357789999999986665554 44556677889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 -g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|..++......+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++........
T Consensus 85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~~~~~~~~--- 158 (282)
T cd06643 85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQ--- 158 (282)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCEEEcccccccccccccc---
Confidence 7788888765566799999999999999999999999999999999999994 678899999999976543221
Q ss_pred cccccCCCCccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 165 IPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
......|+..|+|||++. +..++.++|||||||++|||++|..||..... ...+..+....... ..
T Consensus 159 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~--~~ 229 (282)
T cd06643 159 ----RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEPPT--LA 229 (282)
T ss_pred ----ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH---HHHHHHHhhcCCCC--CC
Confidence 123457899999999984 44578899999999999999999999976442 22233322211111 11
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
....++.++.++|..||+.+|++||++++++
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 260 (282)
T cd06643 230 QPSRWSSEFKDFLKKCLEKNVDARWTTTQLL 260 (282)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 2245789999999999999999999987763
No 242
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.1e-38 Score=307.28 Aligned_cols=245 Identities=22% Similarity=0.337 Sum_probs=199.6
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|++.+.||.|+||.||+|.+..+++.||+|++..... ...+..|+.+++.++|.+++. +..+...+...++++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITK-YYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeee-eeEEEEECCeEEEEEE
Confidence 579999999999999999999999999999998765432 235788999999999665544 4455667788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
++ +++|.+++... .+++..++.++.|++.||.|||+++|+|+||+|+||++ +.++.++|+|||+++.+.....
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~- 153 (274)
T cd06609 80 YCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMS- 153 (274)
T ss_pred eeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeeccccc-
Confidence 98 78999998743 79999999999999999999999999999999999999 4688999999999987754322
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+...... .+..
T Consensus 154 ------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~~----~~~~ 220 (274)
T cd06609 154 ------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP---MRVLFLIPKNNPP----SLEG 220 (274)
T ss_pred ------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch---HHHHHHhhhcCCC----CCcc
Confidence 12345788999999999998899999999999999999999999976442 2222222222111 1122
Q ss_pred C-CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 243 G-YPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 243 ~-~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
. ++.++.+++.+||..+|++||+++++++
T Consensus 221 ~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 221 NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 2 7899999999999999999999887743
No 243
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.8e-37 Score=305.68 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=195.6
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.+.|.+ +..+..++..+...+++|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHAN-IVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCC-EeEEEEEEecCCeEEEEE
Confidence 4689999999999999999999999999999998765432 235778999999998655 556666667778899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||++++|.+.+......+++..+..++.||+.||.|||++||+|+||||+|||++ ..+.+||+|||+++.......
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~~~- 158 (291)
T cd07870 83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKLADFGLARAKSIPSQ- 158 (291)
T ss_pred ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEEeccccccccCCCCC-
Confidence 9999999888765556688999999999999999999999999999999999994 678999999999975433221
Q ss_pred cccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc---------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--------- 232 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--------- 232 (474)
......++..|+|||++.+. .++.++|||||||++|||++|..||.+... ..+.+.++....
T Consensus 159 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 159 ------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD--VFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred ------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh--HHHHHHHHHHHcCCCChhhhh
Confidence 11234578999999998764 478999999999999999999999976532 122222211100
Q ss_pred ----------------ccchHHHHhc--CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 ----------------VSTSIEALCR--GYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 ----------------~~~~~~~l~~--~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.......+.. ..+.++.+++.+|+..||.+||++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l 286 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHh
Confidence 0000111111 1357899999999999999999988764
No 244
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.9e-38 Score=310.71 Aligned_cols=270 Identities=19% Similarity=0.260 Sum_probs=207.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.+.||+|+||.||++.+..+++.|+||.+..... ...+..|+.+++.++|++ |..+...+..+.+.+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPF-VVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCC-eeeeEEEEecCCEEEEE
Confidence 479999999999999999999999999999998765431 235778999999998654 44555666677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ |++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++ ..+.+||+|||+++......
T Consensus 80 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 80 MEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred EecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCEEEeeCCCccccCcCc
Confidence 9999 7899999974 35799999999999999999999999999999999999994 77899999999987422111
Q ss_pred Cccc--------cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc
Q 011945 161 THQH--------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 232 (474)
Q Consensus 161 ~~~~--------~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (474)
.... ..........|+..|+|||.+.+..++.++|||||||++|||++|..||.+... .+.+..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~---~~~~~~~~~~~ 232 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP---EELFGQVISDD 232 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcc
Confidence 1000 000011234678899999999988899999999999999999999999976432 23333332221
Q ss_pred ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccc
Q 011945 233 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTIL 293 (474)
Q Consensus 233 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~ 293 (474)
...+ .....+|.++.++|.+||+.+|++||+...+.++|++.+ ....+|...
T Consensus 233 ~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~-------~~~~~~~~~ 284 (305)
T cd05609 233 IEWP--EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRF-------FLGLDWNGL 284 (305)
T ss_pred cCCC--CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCcc-------ccCCCHHHH
Confidence 1111 111257899999999999999999999887877777653 233566654
No 245
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.4e-38 Score=309.99 Aligned_cols=249 Identities=20% Similarity=0.319 Sum_probs=199.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.++|+++++||.|+||.||+|.+..+++.||+|++..... ...+..|+++++.++| +++..+..++..+...+++||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH-PNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC-CceeEEEEEEecCCeEEEEee
Confidence 3679999999999999999999988999999998765432 2357889999999995 455555556667788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++......+++..++.++.||+.||.|||++||+|+||||+||++ +.++.++|+|||++........
T Consensus 83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~- 158 (280)
T cd06611 83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNKSTLQ- 158 (280)
T ss_pred ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhccccc-
Confidence 99 779999988666789999999999999999999999999999999999999 4778999999999876543221
Q ss_pred cccccccCCCCccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 163 QHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
......|+..|+|||++. +..++.++|||||||++|||++|..||..... ...+..+.......
T Consensus 159 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~-- 227 (280)
T cd06611 159 ------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP---MRVLLKILKSEPPT-- 227 (280)
T ss_pred ------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH---HHHHHHHhcCCCCC--
Confidence 113356899999999975 34578899999999999999999999977532 22333332221111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
......++.++.++|..||..+|++||++.+++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 260 (280)
T cd06611 228 LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELL 260 (280)
T ss_pred cCCcccCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 111245788999999999999999999987773
No 246
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.4e-37 Score=309.64 Aligned_cols=250 Identities=18% Similarity=0.269 Sum_probs=194.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|++.++||+|+||.||++.+..++..||+|.+..... ..++.+|+++++.++|++++ .+..++..+...+++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIV-GFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCC-eEEEEEeeCCEEEEEee
Confidence 479999999999999999999999999999998765432 23578899999999866544 44455567788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++... ..+++..+..++.||+.||.|||+ .+|+|+||||+|||++ .++.+||+|||++........
T Consensus 80 y~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~ 155 (308)
T cd06615 80 HMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDSMA 155 (308)
T ss_pred ccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCCccccccccc
Confidence 98 78999999743 679999999999999999999998 6999999999999994 678899999999876543221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh-----------
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE----------- 230 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~----------- 230 (474)
....|+..|+|||++.+..++.++|||||||++|+|++|..||...........+.....
T Consensus 156 ---------~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 156 ---------NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred ---------ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccc
Confidence 345789999999999988899999999999999999999999965332111111100000
Q ss_pred ------------------ccccchHHHHh-cCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 231 ------------------KKVSTSIEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 231 ------------------~~~~~~~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.......+.++ ..++.++.+|+.+||..+|++||++.+|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll 285 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELT 285 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 00000000001 13678899999999999999999977663
No 247
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-37 Score=307.60 Aligned_cols=247 Identities=21% Similarity=0.319 Sum_probs=198.4
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
..+|++.+.||.|+||.||+|.+..+++.|+||.+.... ....+..|+.+++.++|++++.. ..+...+...++++|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~-~~~~~~~~~~~lv~e 96 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNF-LDSFLVGDELFVVME 96 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeee-eeeEecCceEEEEEE
Confidence 357999999999999999999999999999999876543 23467889999999987665554 445566778899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++. ...+++.+++.++.|++.||.|||++||+|+||||+||+++ .++.+||+|||++.........
T Consensus 97 ~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~~kl~dfg~~~~~~~~~~~ 171 (296)
T cd06655 97 YLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGSVKLTDFGFCAQITPEQSK 171 (296)
T ss_pred ecCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccchhccccccc
Confidence 99 889999886 34689999999999999999999999999999999999994 6788999999998765433211
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.....|+..|+|||.+.+..++.++|||||||++|+|++|..||...... .....+..... .......
T Consensus 172 -------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~---~~~~~~~~~~~--~~~~~~~ 239 (296)
T cd06655 172 -------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL---RALYLIATNGT--PELQNPE 239 (296)
T ss_pred -------CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcCC--cccCCcc
Confidence 12347889999999999988999999999999999999999999774331 22222211111 1111234
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.+++.+.++|.+||..||++||++.+|+
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il 267 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELL 267 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 6789999999999999999999988774
No 248
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.8e-37 Score=305.73 Aligned_cols=260 Identities=23% Similarity=0.314 Sum_probs=205.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.+.||+|+||.||++.+..+++.||||++.... ....+..|+++++.+.|+ +|..+..+...+...+++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHP-FLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC-CccceeeEEEcCCeEEEE
Confidence 47999999999999999999999999999999875432 234578899999999955 555555566777889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+|+||+|+|||| +.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 80 MEYVPGGELFSHLRK-SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred EecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCCC
Confidence 9999 9999999874 3579999999999999999999999999999999999999 467889999999998765431
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
....|++.|+|||.+.+..++.++||||||+++|+|++|..||.... ....+..+..... .+
T Consensus 156 ----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~-----~~ 217 (290)
T cd05580 156 ----------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN---PIQIYEKILEGKV-----RF 217 (290)
T ss_pred ----------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCc-----cC
Confidence 23478999999999998889999999999999999999999997644 2233333332221 23
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
...++..+.+++.+||..||++|++.. ...+++++ ..++...++|....
T Consensus 218 ~~~~~~~l~~li~~~l~~~p~~R~~~~--~~~~~~l~---~~~~~~~~~~~~~~ 266 (290)
T cd05580 218 PSFFSPDAKDLIRNLLQVDLTKRLGNL--KNGVNDIK---NHPWFAGIDWIALL 266 (290)
T ss_pred CccCCHHHHHHHHHHccCCHHHccCcc--cCCHHHHH---cCcccccCCHHHHh
Confidence 355689999999999999999998321 11122222 12444556777764
No 249
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.3e-37 Score=298.63 Aligned_cols=247 Identities=21% Similarity=0.265 Sum_probs=202.4
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++++.||.|+||.||.+++..+++.|++|.+.... ....+.+|+.+++.++|. ++..+..+..+....+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~-~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHP-NIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCC-CeeEEEeEEecCCeEEEEEE
Confidence 6999999999999999999999999999999866432 224588999999999755 45555555667788999999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++... ...+++..++.++.|++.||.|||+.||+|+||||+||+++ .++.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcceEEcccccc
Confidence 99 78999999754 45689999999999999999999999999999999999995 678899999999987654332
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......|+..|+|||++.+..++.++|||||||++|||++|..||.... ..+.+..+....... ..
T Consensus 157 -------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~---~~~~~~~~~~~~~~~----~~ 222 (256)
T cd08221 157 -------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN---PLNLVVKIVQGNYTP----VV 222 (256)
T ss_pred -------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHcCCCCC----Cc
Confidence 1134578999999999998889999999999999999999999997633 333444443333222 22
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRL 272 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~ 272 (474)
..++.++.+++.+||..+|++||++.++++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 5678999999999999999999998887653
No 250
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.8e-38 Score=302.93 Aligned_cols=247 Identities=23% Similarity=0.313 Sum_probs=195.6
Q ss_pred eeeeecCceEEEEEEEcC-CC--eEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 13 RKIGSGSFGEIYLGTNIQ-TN--EEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~-~~--~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
++||+|+||.||+|.+.. .+ ..||||.+..... ...+..|+.+++.++|++++..+..+.. ...+++||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEecC
Confidence 468999999999999865 33 3699998876544 3468899999999997766665554443 7889999998
Q ss_pred CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++ .++.+||+|||+++.+......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~-- 153 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALPQNEDH-- 153 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEeccccccccccccccc--
Confidence 889999997544 5689999999999999999999999999999999999995 6689999999999876543221
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
+.......++..|+|||++.+..++.++|||||||++|||++ |..||...... +.+..+...... ......
T Consensus 154 --~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~~~~~~---~~~~~~ 225 (257)
T cd05040 154 --YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS---QILKKIDKEGER---LERPEA 225 (257)
T ss_pred --eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHhcCCc---CCCCcc
Confidence 111223467889999999999899999999999999999998 99999765432 223332221111 112346
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
+|..+.+++..||..+|++||++.++.+.|.
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 226 CPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 7899999999999999999999999988774
No 251
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=327.81 Aligned_cols=257 Identities=25% Similarity=0.356 Sum_probs=207.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCC----eEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN----EEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 76 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~----~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~ 76 (474)
.++..+.++||+|+||+||+|..+..+ ..||||..+.+. ....+.+|.++++.++ |++|..++++.....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEE 234 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCC
Confidence 345566799999999999999976542 238999876422 2345899999999998 556667777888889
Q ss_pred EEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
..+||||+| ||+|.+++......++..+.+.++.+.+.||+|||++++|||||-.+|+|++ ..+.+||+|||+++.
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---KKGVVKISDFGLSRA 311 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---CCCeEEeCccccccC
Confidence 999999999 8999999997666799999999999999999999999999999999999995 667789999999875
Q ss_pred cccCCCccccccccCC-CCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccc
Q 011945 156 YRDTATHQHIPYRENK-NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKV 233 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~-~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (474)
-..-.. .. ...-..+|+|||.+....|+.++|||||||++||+++ |..||.+....... .+|.....
T Consensus 312 ~~~~~~--------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~---~kI~~~~~ 380 (474)
T KOG0194|consen 312 GSQYVM--------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK---AKIVKNGY 380 (474)
T ss_pred Ccceee--------ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH---HHHHhcCc
Confidence 431111 11 1134689999999999999999999999999999999 88999997654333 33322222
Q ss_pred cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 234 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 234 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
.. ......|.++..++..||..+|++||++.++.+.|+.+....
T Consensus 381 r~---~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 381 RM---PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred cC---CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 11 123467899999999999999999999999999999987544
No 252
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.6e-38 Score=315.12 Aligned_cols=254 Identities=18% Similarity=0.237 Sum_probs=189.3
Q ss_pred Eeeeeeec--CceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 11 LGRKIGSG--SFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 11 i~~~LG~G--~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
++++||+| +|++||++.+..+|+.||||.+..... ...+..|+.+++.++|++++. +..++..+...++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~-~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVP-YRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeee-EEEEEEECCEEEEEEec
Confidence 57889999 789999999999999999998865432 234778999999998655554 55566777888999999
Q ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 85 L-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 85 ~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.++|+||+.+.........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcccchhhcccccccc
Confidence 9 78999998643 34599999999999999999999999999999999999994 6788999999876544322111
Q ss_pred cccccccCCCCccCccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccc-----
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST----- 235 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~--~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~----- 235 (474)
............++..|+|||++.+ ..++.++|||||||++|||++|..||........ ....+ ......
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~-~~~~~~~~~~~ 234 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKL-NGTVPCLLDTT 234 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHHh-cCCcccccccc
Confidence 1000001122357788999999986 4589999999999999999999999976433211 11111 000000
Q ss_pred ------------------------------------hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 236 ------------------------------------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 236 ------------------------------------~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
........+++++.+|+..||+.||++||++++|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 000111235678999999999999999999887743
No 253
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.3e-38 Score=303.89 Aligned_cols=254 Identities=21% Similarity=0.315 Sum_probs=199.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--------CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--------~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
+|+..+.||+|+||.||+|.+..+++.||||++.... ....+..|+++++.++|.+++..+. +..+....+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLG-ATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhc-eeccCCeEE
Confidence 5889999999999999999999999999999876432 1245888999999998766655554 455666788
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
++|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++ .....+||+|||++..+..
T Consensus 80 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~--~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 80 LFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID--STGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccccccccccc
Confidence 889988 7899999874 45789999999999999999999999999999999999994 2334799999999987654
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
....... ......|+..|+|||++.+..++.++|||||||++|+|++|..||...........+..+..... ..
T Consensus 157 ~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~ 230 (268)
T cd06630 157 KGTGAGE---FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT---AP 230 (268)
T ss_pred ccccCCc---cccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC---CC
Confidence 3221110 12335789999999999988899999999999999999999999976443333332222221111 11
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.+...+++++.+++.+||..+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 231 SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 233456789999999999999999999887753
No 254
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.2e-37 Score=300.18 Aligned_cols=246 Identities=22% Similarity=0.281 Sum_probs=199.5
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++.+.||+|+||.||+|.+..+++.||||.+.... ....+..|+.+++.++|++.+. +......+...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~-~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIE-YYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhh-eeeeEecCCEEEEEEe
Confidence 6999999999999999999999999999999876542 2345888999999998665554 4445567778899999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
++ +++|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++ +..+.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCceecCCCcc
Confidence 99 78999999754 34589999999999999999999999999999999999995 3456789999999987654321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
.....|+..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+..... ..+.
T Consensus 158 --------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~ 222 (256)
T cd08220 158 --------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---PALVLKIMSGTF----APIS 222 (256)
T ss_pred --------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---HHHHHHHHhcCC----CCCC
Confidence 1235788999999999988899999999999999999999999976433 222333322211 1233
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..++.++.+++..||..+|++||++.+++.
T Consensus 223 ~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 223 DRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 567899999999999999999999887753
No 255
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.8e-37 Score=309.44 Aligned_cols=249 Identities=20% Similarity=0.278 Sum_probs=197.0
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+++++.+.|. +|..+..+...+...+++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHP-FLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCC-CchhheeeeecCCEEEEE
Confidence 479999999999999999999988999999998765432 23578899999999855 555555666777889999
Q ss_pred EecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 82 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|||+ +++|.+++... ...+++..++.++.||+.||.|||+.||+|+||||+||+|+ .++.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEeecchhhccccc
Confidence 9988 88999998743 35699999999999999999999999999999999999994 6789999999998765432
Q ss_pred CCcccc----------------------ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 011945 160 ATHQHI----------------------PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 217 (474)
Q Consensus 160 ~~~~~~----------------------~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~ 217 (474)
...... .-.....+.||..|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 211000 0001234578999999999999889999999999999999999999997643
Q ss_pred cCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCC
Q 011945 218 AGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD 265 (474)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt 265 (474)
. ...+..+........ ....++.++.++|..||..||++||+
T Consensus 237 ~---~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 237 R---DETFSNILKKEVTFP---GSPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred h---HHHHHHHhcCCccCC---CccccCHHHHHHHHHHccCCHhHCCC
Confidence 3 233333332222111 11236899999999999999999999
No 256
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.5e-38 Score=307.75 Aligned_cols=260 Identities=21% Similarity=0.287 Sum_probs=202.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEc----CCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEe--CC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNI----QTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVE--GD 76 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~----~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~--~~ 76 (474)
...|++.+.||+|+||.||+|.+. .+++.||||++..... ...+..|+++++.+.|.+++..+ .++.. ..
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~-~~~~~~~~~ 81 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYK-GVCEKPGGR 81 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEE-eeeecCCCC
Confidence 357899999999999999999864 3478999998876544 35689999999999866555544 44443 56
Q ss_pred EEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
..+++|||+ +++|.+++......+++..++.++.||+.||+|||++||+|+||||+|||++ .++.++|+|||++..
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~ 158 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---SEDLVKISDFGLAKV 158 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccccccc
Confidence 789999999 7899999986555799999999999999999999999999999999999994 678999999999987
Q ss_pred cccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH-----------HHH
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-----------KQK 224 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~-----------~~~ 224 (474)
....... +.......++..|++||.+.+..++.++|||||||++|||++|..||........ ...
T Consensus 159 ~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05038 159 LPEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR 234 (284)
T ss_pred cccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHH
Confidence 6533221 1111223456779999999988999999999999999999999999865332110 111
Q ss_pred HHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 225 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 225 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
+......... ......+|.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 235 ~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 235 LLELLKEGER---LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHcCCc---CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111111111 111245688999999999999999999999999998865
No 257
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.5e-38 Score=309.03 Aligned_cols=253 Identities=17% Similarity=0.286 Sum_probs=197.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.++|+++++||+|+||+||++.+..+++.||+|++..... ...+..|+++++.++|++ +..+..+.......++||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPY-IVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCC-cceEeeeEecCCEEEEEE
Confidence 3679999999999999999999999999999998754332 346889999999998554 445555556668889999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||+ +++|.+++.. .+.+++..+..++.|++.||.|||+ .+|+||||||+||+++ .++.++|+|||++.......
T Consensus 83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 83 EFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred ecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCCcEEEccCCcccchhhhc
Confidence 999 7899988874 4569999999999999999999997 6999999999999994 67899999999987553322
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCc----HHHHHHHHhhccccch
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT----KKQKYEKISEKKVSTS 236 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~----~~~~~~~i~~~~~~~~ 236 (474)
. ....|+..|+|||++.+..++.++|||||||++|+|++|..||....... ....+..+........
T Consensus 159 ~---------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd06620 159 A---------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP 229 (284)
T ss_pred c---------CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc
Confidence 1 23578999999999998889999999999999999999999998644321 0011111111111111
Q ss_pred HHHHh-cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011945 237 IEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLKRL 272 (474)
Q Consensus 237 ~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~ 272 (474)
...+. ..++.++.+|+.+||..||++||++.++.+.
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 230 PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11111 1378899999999999999999999887653
No 258
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.1e-37 Score=303.11 Aligned_cols=253 Identities=21% Similarity=0.349 Sum_probs=197.5
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEe------CC
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVE------GD 76 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~------~~ 76 (474)
.-.++|++.+.||.|+||.||+|.+..+++.|++|++..... ...+..|+.+++.+..|+++..+..++.. +.
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 345899999999999999999999988999999998765433 35688999999999655555555544432 44
Q ss_pred EEEEEEecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCC
Q 011945 77 YNVLVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (474)
..+++|||+ +++|.+++... +..+++..++.++.||+.||.|||++||+|+||+|+||+++ .++.++|+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEECCCcc
Confidence 689999999 67999988643 35799999999999999999999999999999999999994 678999999999
Q ss_pred ccccccCCCccccccccCCCCccCccccccccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHH
Q 011945 153 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK 227 (474)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-----~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 227 (474)
+......... .....|+..|+|||++.. ..++.++|||||||+||+|++|..||...... ..+..
T Consensus 160 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~ 229 (275)
T cd06608 160 SAQLDSTLGR-------RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM---RALFK 229 (275)
T ss_pred ceecccchhh-------hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH---HHHHH
Confidence 8765432211 133568999999998764 34678999999999999999999999764322 22222
Q ss_pred HhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 228 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 228 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
+....... . .....++.++.+++.+||..||++||++.+|++
T Consensus 230 ~~~~~~~~-~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 230 IPRNPPPT-L-KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hhccCCCC-C-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 22211111 0 011246789999999999999999999888754
No 259
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.2e-37 Score=300.76 Aligned_cols=247 Identities=22% Similarity=0.291 Sum_probs=201.5
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeE-eCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~-~~~~~~lv~ 82 (474)
+|++++.||.|+||.||+|.+..+++.||+|++..... ...+..|+.+++.++|++++..+..+.. .+...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 58999999999999999999999999999998764332 2357789999999997776666554433 456789999
Q ss_pred ecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH-----HCCccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 83 DLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVH-----SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 83 e~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLH-----s~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
||+ +++|.+++... ...+++..++.++.||+.||.||| +.+|+|+||||+||+++ ..+.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEEEeccccc
Confidence 998 78999998754 457999999999999999999999 89999999999999995 6789999999999
Q ss_pred cccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (474)
......... .....|+..|+|||++.+..++.++||||||+++|+|++|..||.... .......+.....
T Consensus 158 ~~~~~~~~~-------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~ 227 (265)
T cd08217 158 KILGHDSSF-------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---QLQLASKIKEGKF 227 (265)
T ss_pred ccccCCccc-------ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---HHHHHHHHhcCCC
Confidence 876543321 123478999999999999889999999999999999999999998743 2233333332222
Q ss_pred cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 234 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 234 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..+...++.++.+++..||..+|++||++.+|++
T Consensus 228 ----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 228 ----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 2234567899999999999999999999888764
No 260
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.9e-37 Score=307.13 Aligned_cols=259 Identities=21% Similarity=0.252 Sum_probs=197.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcC--CCeEEEEEEecc-----CCCchHHHHHHHHHHHhcCCCCCceeEEEeEeC--CEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQ--TNEEVAIKLENV-----KTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG--DYN 78 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~--~~~~vAvK~~~~-----~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~--~~~ 78 (474)
+|.+.++||+|+||.||+|.+.. +++.||||++.. ......+..|+.+++.++|++++..+..+ ... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVF-LEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEE-eCCCCceE
Confidence 58999999999999999999988 899999998776 23345688899999999976666655544 444 789
Q ss_pred EEEEecCCCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeee-CCCCCeEEEEecCCc
Q 011945 79 VLVIDLLGPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL-GRRANQVYIIDFGLA 153 (474)
Q Consensus 79 ~lv~e~~g~sL~~li~~~~----~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~-~~~~~~vkL~DFGla 153 (474)
++||||++++|.+++.... ..+++..++.++.||+.||.|||+++|+||||||+|||++. ++..+.+||+|||++
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 80 YLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999999999998876432 26899999999999999999999999999999999999952 112789999999999
Q ss_pred cccccCCCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCc------HHHHHH
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKYE 226 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~------~~~~~~ 226 (474)
......... ........++..|+|||++.+. .++.++|||||||+||+|++|..||.+..... ....+.
T Consensus 160 ~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 160 RLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred cccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 876543221 1123445789999999988774 57999999999999999999999998654332 001111
Q ss_pred HHhhc----------------------------ccc-chHHH-Hh--cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 227 KISEK----------------------------KVS-TSIEA-LC--RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 227 ~i~~~----------------------------~~~-~~~~~-l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.+... ... ..... .. ...+.++.+++..||..||++||++.++++
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11000 000 00011 11 156678999999999999999999888753
No 261
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=345.23 Aligned_cols=257 Identities=20% Similarity=0.271 Sum_probs=207.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCC-C----eEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQT-N----EEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~----~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
...++.+.||+|.||+||.|..... + ..||||.++.... ...|.+|..+|..++|+|++..+..+.. ....
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-~~~~ 770 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-SGPP 770 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-CCCc
Confidence 4578899999999999999987543 2 2488887765433 3459999999999998777777666555 6677
Q ss_pred EEEEecC-CCCHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecC
Q 011945 79 VLVIDLL-GPSLEDLFNFC------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 151 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFG 151 (474)
+|++||| ||+|..+++.. ...++..+.+.++.|||+|+.||+++++|||||-..|+||+ ....|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---ERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---ccCcEEEcccc
Confidence 8888888 99999999977 55699999999999999999999999999999999999995 66999999999
Q ss_pred CccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhh
Q 011945 152 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISE 230 (474)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 230 (474)
+|+.+-+... |+......-...|||||.+....++.|+|||||||+|||+++ |..||.+....+ .+..+..
T Consensus 848 lArDiy~~~y-----yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~---v~~~~~~ 919 (1025)
T KOG1095|consen 848 LARDIYDKDY-----YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE---VLLDVLE 919 (1025)
T ss_pred hhHhhhhchh-----eeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH---HHHHHHh
Confidence 9995444332 222222344679999999999999999999999999999999 999998865432 2222222
Q ss_pred ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 231 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 231 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
.. .-..+..||+.+.++|..||+.+|++||+|..|++.+..++..
T Consensus 920 gg----RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 920 GG----RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CC----ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 22 1223468999999999999999999999999999988877653
No 262
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.7e-37 Score=303.81 Aligned_cols=255 Identities=21% Similarity=0.250 Sum_probs=196.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
++|++.+.||.|+||+||+|.+..+++.||||.+.... ....+..|+++++.+.|+ ++..+..+...+...++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCC-CEeeEEEEEecCCeEEEEE
Confidence 67999999999999999999999899999999875432 224578899999999865 4555555666778999999
Q ss_pred ecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||++++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++ ...+.+||+|||++........
T Consensus 81 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~--~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 81 EYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred ecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE--CCCCEEEEcccccccccCCCcc
Confidence 999889988886433 2368899999999999999999999999999999999996 3456899999999976533211
Q ss_pred ccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc--------
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-------- 232 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-------- 232 (474)
......++..|+|||++.+. .++.++|||||||++|+|++|..||...........+.......
T Consensus 159 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 159 -------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGV 231 (294)
T ss_pred -------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccc
Confidence 11234678999999998764 57899999999999999999999997643321111111100000
Q ss_pred -------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 -------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 -------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
...........+++++.+++.+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001111223467889999999999999999999888754
No 263
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.4e-37 Score=303.40 Aligned_cols=255 Identities=21% Similarity=0.272 Sum_probs=198.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
++|++.++||+|+||.||+|.+..+++.||||+++.. .....+..|+++++.+.|.+ +..+..++..+...+++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHEN-IVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCC-eeehhheEEECCEEEEEE
Confidence 4799999999999999999999999999999986543 22356889999999999655 444555556688899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
||+++++.+.+......+++..++.++.||+.||.|||++||+|+||||+||+++ +++.+||+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEEeeecccccCCCccc
Confidence 9997777666554556799999999999999999999999999999999999994 6889999999999876544321
Q ss_pred cccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc----------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK---------- 231 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~---------- 231 (474)
......++..|+|||++.+. .++.++|||||||++|+|++|..||.+....+.......+...
T Consensus 157 ------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 157 ------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred ------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 11345788999999999988 7899999999999999999999999764322111111111000
Q ss_pred -------------cccchHHH-HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 232 -------------KVSTSIEA-LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 232 -------------~~~~~~~~-l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
........ ....++.++.++|..||..+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00001111 12235899999999999999999999887753
No 264
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=9.1e-38 Score=303.74 Aligned_cols=249 Identities=24% Similarity=0.346 Sum_probs=194.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-------chHHHHHHHHHHHhcCCCCCceeEEEeE-eCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~l~~E~~il~~l~~~~~i~~l~~~~~-~~~~~ 78 (474)
.+|++.+.||+|+||.||+|.+..++..|++|++..... ...+.+|+.+++.++|++++..+..+.. .....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 479999999999999999999999999999998754321 1347889999999987666665554443 35678
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+++||++ +++|.+++.. ...+++..++.++.||+.||.|||+++|+||||||+||++ +.++.+||+|||++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCccccc
Confidence 8999998 7899999874 3468999999999999999999999999999999999999 467889999999997654
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
...... .......++..|+|||++.+..++.++|||||||++|||++|+.||..... .+.+..+.... ..
T Consensus 158 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---~~~~~~~~~~~---~~ 227 (266)
T cd06651 158 TICMSG----TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---MAAIFKIATQP---TN 227 (266)
T ss_pred cccccC----CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---HHHHHHHhcCC---CC
Confidence 321100 011234688999999999998899999999999999999999999976432 22222221111 11
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
..+...+++.+.+++ .||..+|++||++++|+
T Consensus 228 ~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 228 PQLPSHISEHARDFL-GCIFVEARHRPSAEELL 259 (266)
T ss_pred CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHh
Confidence 222345678889998 68889999999988874
No 265
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=298.63 Aligned_cols=249 Identities=19% Similarity=0.315 Sum_probs=208.3
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCch---HHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP---QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~---~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++.+++..||.|+.|.||+++.+.+|..+|||.+......+ .++..+.++.....++.|+...+|+..+...+|.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 34567788999999999999999999999999887654433 466667777666668888888888888888899999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
+|..-++.+++...+++++..+-.+...++.||.||.+ +||||||+||+|||+ |..|++||||||++-.+.+...+
T Consensus 172 lMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 172 LMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred HHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeeccccc
Confidence 99888999998888899999999999999999999997 689999999999999 68999999999999888776543
Q ss_pred cccccccCCCCccCccccccccccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~---~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
....|.+.|||||-+.-. .|+.++||||||++|+||+||..||.+.+ ...+.+.++..... +.++
T Consensus 249 --------trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~--tdFe~ltkvln~eP-P~L~- 316 (391)
T KOG0983|consen 249 --------TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK--TDFEVLTKVLNEEP-PLLP- 316 (391)
T ss_pred --------ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC--ccHHHHHHHHhcCC-CCCC-
Confidence 345899999999998743 58999999999999999999999999854 34555666655332 2111
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
-..++++.|.+|+..||.+|+.+||.|.+|+
T Consensus 317 ~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll 347 (391)
T KOG0983|consen 317 GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLL 347 (391)
T ss_pred cccCcCHHHHHHHHHHhhcCcccCcchHHHh
Confidence 1245899999999999999999999998774
No 266
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2e-37 Score=307.18 Aligned_cols=259 Identities=19% Similarity=0.217 Sum_probs=196.4
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEe-------
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVE------- 74 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~------- 74 (474)
.++|++.++||+|+||.||+|.+..+++.||||.+..... ...+.+|+.+++.++|++++..+..+...
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 4679999999999999999999999999999998754322 23457899999999987777666554332
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
....+++|||++++|.+++......+++.+++.++.||+.||.|||++||+|+||||+|||+ +.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEECcCCCcc
Confidence 24569999999999999987655579999999999999999999999999999999999999 477899999999998
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (474)
.+........ .......++..|+|||.+.+.. ++.++|||||||++|||++|..||.+.........+..+.....
T Consensus 168 ~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 168 AFSLSKNSKP---NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred cccCCcccCC---CCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 7654322110 1112346788999999987654 78999999999999999999999987543222222222211000
Q ss_pred cc-----------------------hHHHHh-cCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 234 ST-----------------------SIEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 234 ~~-----------------------~~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.. ....+. ...+..+.++|..||..||++||++++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 00 000000 11246778999999999999999988775
No 267
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.7e-37 Score=301.41 Aligned_cols=250 Identities=24% Similarity=0.338 Sum_probs=194.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-------chHHHHHHHHHHHhcCCCCCceeEEEeE-eCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~l~~E~~il~~l~~~~~i~~l~~~~~-~~~~~ 78 (474)
.+|++.++||+|+||.||+|.+..+++.||||.+..... ...+..|+.+++.+.|++++..+..+.. .....
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 579999999999999999999999999999998653211 1247789999999987666655544333 24577
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+++|||+ +++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+|||++ .++.++|+|||++....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD---SVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---CCCCEEECcCccccccc
Confidence 8999999 78999998743 4689999999999999999999999999999999999994 67899999999998654
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
..... ........|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+......
T Consensus 158 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~--- 227 (265)
T cd06652 158 TICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA---MAAIFKIATQPTN--- 227 (265)
T ss_pred ccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch---HHHHHHHhcCCCC---
Confidence 32111 0112335689999999999998899999999999999999999999976432 2222222221111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..+...++..+.+++..|| .+|++||++++|++
T Consensus 228 ~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 228 PVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred CCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 1123345678999999999 49999999887753
No 268
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.7e-37 Score=300.57 Aligned_cols=254 Identities=22% Similarity=0.318 Sum_probs=201.4
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|++.+.||.|+||+||+|.+..++..|++|++.... ....+.+|+++++.++|.+++ .+......+...+++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVV-KYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEE-EEEEEEeeCCEEEEEEe
Confidence 57999999999999999999998899999999886543 235688999999999865544 45555667788899999
Q ss_pred cC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 84 LL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 84 ~~-g~sL~~li~~~--~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
++ +++|.+++... ...+++..+..++.||+.||.|||++||+|+||||+||+++ +++.++|+|||++..+....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSVKIADFGVSASLADGG 156 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccchHHHhccCc
Confidence 99 88999999753 24689999999999999999999999999999999999994 67889999999998776543
Q ss_pred CccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
... ........|+..|++||++... .++.++|||||||++|+|++|+.||...... +.+.++...... ....
T Consensus 157 ~~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~-~~~~ 229 (267)
T cd06610 157 DRT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM---KVLMLTLQNDPP-SLET 229 (267)
T ss_pred ccc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh---hhHHHHhcCCCC-CcCC
Confidence 321 0112345789999999998877 7899999999999999999999999765432 222222222111 1111
Q ss_pred H--hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 240 L--CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 240 l--~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
. ...+++++.+++..||..||++||++.+|++
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1 1367899999999999999999999887754
No 269
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3e-37 Score=304.07 Aligned_cols=252 Identities=19% Similarity=0.308 Sum_probs=195.9
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEe-----CCEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVE-----GDYN 78 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~-----~~~~ 78 (474)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+.+|+++..+..++.. ....
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 3578999999999999999999999999999999876532 235678899999999555566555444432 2467
Q ss_pred EEEEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 79 VLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
+++|||+ +++|.++++. ....+++..++.++.|++.||.|||++||+|+||||+||+++ ..+.+||+|||++.
T Consensus 100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~---~~~~~kl~dfg~~~ 176 (291)
T cd06639 100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT---TEGGVKLVDFGVSA 176 (291)
T ss_pred EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEeecccch
Confidence 9999999 8899998863 345789999999999999999999999999999999999994 67889999999998
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHh
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 229 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-----~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~ 229 (474)
........ .....|+..|+|||++... .++.++|||||||++|||++|+.||..... ...+..+.
T Consensus 177 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~---~~~~~~~~ 246 (291)
T cd06639 177 QLTSTRLR-------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP---VKTLFKIP 246 (291)
T ss_pred hccccccc-------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH---HHHHHHHh
Confidence 65432211 1234688999999998643 368999999999999999999999976533 22222222
Q ss_pred hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 230 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
....... .....++..+.++|.+||..+|++||++.+|++
T Consensus 247 ~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 247 RNPPPTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cCCCCCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 2111110 112346678999999999999999999888754
No 270
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=9.2e-38 Score=305.70 Aligned_cols=246 Identities=21% Similarity=0.338 Sum_probs=198.9
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
...|+++++||.|+||.||+|.+..++..||||++..... ...+..|+.+++.+.| +++..+..++..+...++||
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEECCEEEEEE
Confidence 3568899999999999999999988999999998765432 2357889999999975 45555555667788999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|.+++. ..++++..+..++.|++.||.|||+.+|+|+||+|+||+++ ..+.++|+|||++........
T Consensus 82 e~~~~~~L~~~i~--~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 82 EYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred ecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEEcccccceeccCCcc
Confidence 999 889999886 35789999999999999999999999999999999999994 678899999999976643221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......++..|+|||++.+..++.++|||||||++|||++|..||....... ....+.... .+.+.
T Consensus 157 -------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~----~~~~~ 222 (277)
T cd06640 157 -------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR---VLFLIPKNN----PPTLT 222 (277)
T ss_pred -------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh---HhhhhhcCC----CCCCc
Confidence 1123468889999999999889999999999999999999999998654321 111111111 11233
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..++..+.+++..||..+|++||++.+++.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 456889999999999999999999988854
No 271
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.3e-37 Score=313.80 Aligned_cols=256 Identities=21% Similarity=0.216 Sum_probs=198.2
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCchHHHHHHHHHHHhcCCCCCceeEEEeEe----CC
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVE----GD 76 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~----~~ 76 (474)
+.++|++.+.||.|+||+||+|.+..+++.||||.+... .....+..|+.+++.++|.+++..+..+... ..
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 678999999999999999999999999999999987542 1234577899999999877666655444322 13
Q ss_pred EEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 77 YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 77 ~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
..+++|||++++|.+++.. ...+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||+++..
T Consensus 83 ~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---ANCDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECcCcccccc
Confidence 5799999999999999874 45799999999999999999999999999999999999994 6788999999999866
Q ss_pred ccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh-----
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE----- 230 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~----- 230 (474)
..... ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+..+..
T Consensus 159 ~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 159 SEKGD-------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE 231 (337)
T ss_pred CCCcc-------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence 44321 1133468899999998875 4589999999999999999999999976432111111111000
Q ss_pred ------------------ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 231 ------------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 231 ------------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.............+++++.++|.+||..+|++||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 232 DLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred HhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence 00011122334568899999999999999999999777643
No 272
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-37 Score=313.91 Aligned_cols=259 Identities=18% Similarity=0.238 Sum_probs=200.3
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeE---eCCE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGV---EGDY 77 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~---~~~~ 77 (474)
++++|++.+.||.|+||.||+|.+..+++.||||++.... ....+..|+.+++.++|++++..+..+.. ....
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 5689999999999999999999999999999999876532 23457789999999996665555444332 4457
Q ss_pred EEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 78 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
.+++|||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 83 ~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 83 VYVVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---EDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEecccccceeec
Confidence 899999999899998863 45699999999999999999999999999999999999994 78899999999998765
Q ss_pred cCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH--------
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI-------- 228 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i-------- 228 (474)
...... ........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.........+...
T Consensus 159 ~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 159 SSPTEH---KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred ccCcCC---CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 432211 011134578999999999876 45899999999999999999999999764332111111110
Q ss_pred ---------------hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 229 ---------------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 229 ---------------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
...........+...++.++.++|..||+.+|++||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 292 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL 292 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 001111122334456789999999999999999999987653
No 273
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.5e-37 Score=303.11 Aligned_cols=253 Identities=20% Similarity=0.232 Sum_probs=196.0
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++++.||.|+||.||+|++..+++.||||.+..... ...+..|+++++.++|++++..+ .+...+...+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL-DVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchh-hhcccCCcEEEEee
Confidence 48999999999999999999999999999998764332 24688999999999876555544 44567778899999
Q ss_pred cCCCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LLGPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+.++|.+++... ...+++..++.++.||+.||+|||++||+|+||+|+||++ +.++.+||+|||++..+.....
T Consensus 80 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 80 FLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred ccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCcc-
Confidence 9988999988643 3568999999999999999999999999999999999999 4778999999999876543221
Q ss_pred cccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc---------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--------- 232 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--------- 232 (474)
......++..|+|||++.+.. ++.++|||||||++|||++|+.||.+.........+.......
T Consensus 156 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 156 ------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred ------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 112235688999999987754 6889999999999999999999997643221111111100000
Q ss_pred ------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 ------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 ------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.......+...+++++.++|.+||..||++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 011122233457889999999999999999999887753
No 274
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.3e-37 Score=301.25 Aligned_cols=253 Identities=22% Similarity=0.287 Sum_probs=197.4
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
+|++.++||.|++|.||+|++..+++.||||++.... ....+..|+.+++.++| +++..+..++......+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH-ENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC-CCEeeeeeeEeeCCcEEEEEec
Confidence 5899999999999999999999999999999876543 23457789999999975 5556666666777888999999
Q ss_pred CCCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 85 LGPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 85 ~g~sL~~li~~~~--~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.++|+|||++........
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 80 MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred CCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCCcc-
Confidence 9889999887443 468999999999999999999999999999999999999 4678999999999976543211
Q ss_pred cccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc--------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 233 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 233 (474)
......++..|++||++.+. .++.++|||||||++|+|++|+.||.+.........+........
T Consensus 156 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 156 ------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred ------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 11234678899999998764 478999999999999999999999987543222221111110000
Q ss_pred -------------cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 234 -------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 234 -------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
......+...++.++.+++..||+.||++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00112223456789999999999999999999887753
No 275
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-39 Score=316.05 Aligned_cols=274 Identities=21% Similarity=0.257 Sum_probs=221.1
Q ss_pred CCccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCC
Q 011945 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 76 (474)
Q Consensus 2 ~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~ 76 (474)
.|+-.+.|..-++||+||||+||-|+-..||+.||+|.+..+. ...-..+|..||.+++.. .|+.+.+.....+
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~-FiVslaYAfeTkd 258 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSP-FIVSLAYAFETKD 258 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccC-cEEEEeeeecCCC
Confidence 4666788999999999999999999999999999999754432 233467899999999854 7777777778888
Q ss_pred EEEEEEecC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
..|+||.+| ||+|.-.|.+.+ ..|++..++.++.+|+.||++||..+||+|||||+|||+ |+.|+|.|+|+|||.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAv 335 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAV 335 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEE
Confidence 899999999 889977775443 459999999999999999999999999999999999999 689999999999999
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
.+...... ...+||.+|||||++.++.|+...|+|||||+||||+.|+-||...+.....+.++ .. ..
T Consensus 336 ei~~g~~~--------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvd---rr-~~ 403 (591)
T KOG0986|consen 336 EIPEGKPI--------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVD---RR-TL 403 (591)
T ss_pred ecCCCCcc--------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHH---HH-Hh
Confidence 88775542 34589999999999999999999999999999999999999998755433332222 21 22
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHH-----HHHHHHHHHHHHcCCCCCCccccccccccccccC
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYA-----YLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 301 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~-----~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~ 301 (474)
...+++...++++.++|++..|.+||.+|-... ++.+ .++...++|..+......++
T Consensus 404 ~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~----------HpfFk~lnw~rleagml~PP 465 (591)
T KOG0986|consen 404 EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKE----------HPFFKDLNWRRLEAGMLEPP 465 (591)
T ss_pred cchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhh----------CcccccCCHhHHhccCCCCC
Confidence 334456678999999999999999999997532 2221 34555688987765544433
No 276
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.2e-37 Score=300.72 Aligned_cols=239 Identities=18% Similarity=0.214 Sum_probs=185.4
Q ss_pred eeeeecCceEEEEEEEcCCC----------eEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 13 RKIGSGSFGEIYLGTNIQTN----------EEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~----------~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
+.||+|+||.||+|.+..++ ..|++|+...... ...+.+|+.+++.+.|++++..+..+ .. ...+++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVC-VR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEE-ec-CCcEEE
Confidence 47899999999999987766 4588887655433 46788999999999876665555444 33 567899
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCC----CCCeEEEEecCCcccc
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR----RANQVYIIDFGLAKRY 156 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~----~~~~vkL~DFGla~~~ 156 (474)
|||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.+. ....+||+|||++...
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~ 158 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence 9999 8899999875555799999999999999999999999999999999999996322 1127999999999865
Q ss_pred ccCCCccccccccCCCCccCccccccccccCC--CCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccc
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKV 233 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~--~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (474)
... ....++..|+|||++.+. .++.++|||||||++|||++ |..||...........+. ....
T Consensus 159 ~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~~~~ 224 (259)
T cd05037 159 LSR-----------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---DQHR 224 (259)
T ss_pred ccc-----------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---cCCC
Confidence 431 123567889999999877 78999999999999999999 688887754322222221 1100
Q ss_pred cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 234 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 234 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
........+.+++.+||..+|++||++.+|++.|
T Consensus 225 ------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 225 ------LPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ------CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0111237899999999999999999999988765
No 277
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.2e-37 Score=300.51 Aligned_cols=252 Identities=20% Similarity=0.322 Sum_probs=197.6
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--------chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--------~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
+|++.+.||.|+||.||+|.+ .+++.||||++..... ...+.+|+.+++.++|.+ +..+..++.+....+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVN-IVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCC-EeeEeeEeecCCeEE
Confidence 588999999999999999986 5788999998764321 134788999999998655 445555566678999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
++|||+ +++|.+++.. ...+++..+..++.||+.||+|||+.||+|+||||+||++ +..+.++|+|||++.....
T Consensus 79 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 79 IFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhhhh
Confidence 999999 8899999974 3568999999999999999999999999999999999999 4778999999999986533
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
....... ........|+..|+|||++.+..++.++|||||||++|+|++|..||...... .....+... ....+
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~--~~~~~ 228 (265)
T cd06631 155 VGLHGTH-SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL---AAMFYIGAH--RGLMP 228 (265)
T ss_pred ccccccc-cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH---HHHHHhhhc--cCCCC
Confidence 2111000 01123457899999999999988999999999999999999999999764321 111111111 11222
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.+...++.++.++|..||..+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 229 RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 345678899999999999999999999887753
No 278
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.4e-38 Score=331.43 Aligned_cols=256 Identities=20% Similarity=0.239 Sum_probs=184.4
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCC-eEEEEE------------------Eecc-CCCchHHHHHHHHHHHhcCCCC
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIK------------------LENV-KTKHPQLQYEAKLYKILQGGTG 64 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~-~~vAvK------------------~~~~-~~~~~~l~~E~~il~~l~~~~~ 64 (474)
+.++|+++++||+|+||+||+|..+... +.+++| .+.. ......+.+|+.+++.++|+++
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998764322 222222 1111 1122357899999999986655
Q ss_pred CceeEEEeEeCCEEEEEEecCCCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCC
Q 011945 65 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 140 (474)
Q Consensus 65 i~~l~~~~~~~~~~~lv~e~~g~sL~~li~~~----~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~ 140 (474)
+. +..+.......|+++++++++|.+++... ........++.|+.||+.||.|||++|||||||||+|||| +
T Consensus 226 v~-l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl---~ 301 (501)
T PHA03210 226 LK-IEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL---N 301 (501)
T ss_pred Cc-EeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---C
Confidence 54 55556677788999999998998887532 1224567788999999999999999999999999999999 4
Q ss_pred CCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCc
Q 011945 141 RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT 220 (474)
Q Consensus 141 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~ 220 (474)
.++.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||+||||++|..++.......
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~ 375 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREA------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGK 375 (501)
T ss_pred CCCCEEEEeCCCceecCccccc------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCC
Confidence 7789999999999876543221 1234679999999999999999999999999999999999876543322222
Q ss_pred HHHHHHHHhhc------ccc-------------------chHHHHh--cCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 221 KKQKYEKISEK------KVS-------------------TSIEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 221 ~~~~~~~i~~~------~~~-------------------~~~~~l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
....+.++... .+. ..+..+. ..++..+.++|.+||..||++||++.+++
T Consensus 376 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL 452 (501)
T PHA03210 376 PGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL 452 (501)
T ss_pred HHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence 22222211110 000 0111111 24677889999999999999999988874
No 279
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.8e-37 Score=307.25 Aligned_cols=248 Identities=22% Similarity=0.325 Sum_probs=197.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+.+++.+.|.+++ .+..++..+...+++||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIV-NYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEe-eEEEEEecCCEEEEeec
Confidence 4789999999999999999999999999999998765432 34578899999998765544 44445566778899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++. ...+++..++.++.|++.||.|||+.||+||||||+|||++ .++.++|+|||++.........
T Consensus 97 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 97 YLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred ccCCCCHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEECcCccceEccCCccC
Confidence 99 889999986 34689999999999999999999999999999999999994 6789999999999765433211
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.....+++.|+|||.+.+..++.++|||||||++|+|++|..||....... ....+.... ........
T Consensus 172 -------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~---~~~~~~~~~--~~~~~~~~ 239 (297)
T cd06656 172 -------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYLIATNG--TPELQNPE 239 (297)
T ss_pred -------cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch---heeeeccCC--CCCCCCcc
Confidence 123478899999999999889999999999999999999999997643311 111111100 00111224
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.++..+.+++.+||..+|++||++.+|++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 57789999999999999999999887754
No 280
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=318.40 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=210.5
Q ss_pred EEeeeeeecCceEEEEEEEcCC--C--eEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 10 RLGRKIGSGSFGEIYLGTNIQT--N--EEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~--~--~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.+.++||.|.||.||.|..... | --||||..+.+. ..+.|..|..+|+.+.|+++|..++.+. ....||||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~--e~P~Wivm 469 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV--EQPMWIVM 469 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee--ccceeEEE
Confidence 3457899999999999986432 2 358899876643 3456999999999999777776665543 34579999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|++ -|-|..+++..+..++..+...++.||+.+|.|||++.+|||||-..|||+. ...+|||+|||+++.+.+...
T Consensus 470 EL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLaDFGLSR~~ed~~y 546 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLADFGLSRYLEDDAY 546 (974)
T ss_pred ecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeecccchhhhccccch
Confidence 999 8899999998788899999999999999999999999999999999999995 788999999999998887654
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
|. .....-...|||||.+.-..++.++|||-|||+|||++. |..||++.+..+....+++ ......
T Consensus 547 -----Yk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEn-------GeRlP~ 613 (974)
T KOG4257|consen 547 -----YK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIEN-------GERLPC 613 (974)
T ss_pred -----hh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecC-------CCCCCC
Confidence 22 223345678999999998899999999999999999987 9999999877654333322 222334
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 281 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 281 (474)
++.||+.+..|+.+||+++|.+||++.+|...|.++++.+.
T Consensus 614 P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek 654 (974)
T KOG4257|consen 614 PPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEK 654 (974)
T ss_pred CCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhh
Confidence 57899999999999999999999999999999999998554
No 281
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=347.54 Aligned_cols=264 Identities=24% Similarity=0.325 Sum_probs=217.6
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.++|.|+++||+|+||+|.+++.+.+++.||+|+++... ...-|..|-.+|-.-. ...|..+++.+.++.+.|+
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccceEE
Confidence 468999999999999999999999999999999887532 2233666777776544 6778888888899999999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
||||+ ||+|..++.... +++++.+..++..|+.||.-||+.|+|||||||+|||| +..|++||+|||.|..+..+
T Consensus 153 VMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCCC
Confidence 99999 999999998666 89999999999999999999999999999999999999 58999999999999888765
Q ss_pred CCccccccccCCCCccCcccccccccc----C-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHL----G-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~----~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
..-. ....+|||.|++||++. + +.|++.+|+||+||++|||+.|..||+. ......|.+|...+-.
T Consensus 229 G~V~------s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa---dslveTY~KIm~hk~~ 299 (1317)
T KOG0612|consen 229 GTVR------SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA---DSLVETYGKIMNHKES 299 (1317)
T ss_pred CcEE------eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH---HHHHHHHHHHhchhhh
Confidence 4422 34569999999999987 2 4689999999999999999999999976 4667788888877544
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCC---HHHHHHHHHHHHHHcCCCCCCccccccccc
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPD---YAYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt---~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 295 (474)
..++.. ..++++.++||...+. +|+.|.. ++++.. .+|....+|...+.
T Consensus 300 l~FP~~-~~VSeeakdLI~~ll~-~~e~RLgrngiedik~----------HpFF~g~~W~~iR~ 351 (1317)
T KOG0612|consen 300 LSFPDE-TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN----------HPFFEGIDWDNIRE 351 (1317)
T ss_pred cCCCcc-cccCHHHHHHHHHHhc-ChhhhcccccHHHHHh----------CccccCCChhhhhh
Confidence 333322 3488999999999875 5888877 554432 36677789976543
No 282
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.3e-37 Score=297.53 Aligned_cols=244 Identities=20% Similarity=0.305 Sum_probs=191.9
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
++||+|+||.||+|.. .++..||+|++..... ...+..|+.+++.+.|.+++. +..++......+++|||+ +++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVK-LIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCe-EEEEEecCCccEEEEECCCCCc
Confidence 4789999999999985 5688999998765432 234788999999998655554 444556667789999998 899
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccc
Q 011945 89 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 168 (474)
Q Consensus 89 L~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (474)
|.+++......+++..++.++.|++.+|.|||++|++||||||+||+++ .++.+||+|||++.........
T Consensus 79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~~~~~------ 149 (250)
T cd05085 79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSRQEDDGIYS------ 149 (250)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCCccceeccccccc------
Confidence 9999875556789999999999999999999999999999999999994 7789999999999754332211
Q ss_pred cCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHH
Q 011945 169 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 247 (474)
Q Consensus 169 ~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 247 (474)
......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.... .....+.... . ......++..
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~---~~~~~~~~~~-~---~~~~~~~~~~ 222 (250)
T cd05085 150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ---QAREQVEKGY-R---MSCPQKCPDD 222 (250)
T ss_pred cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcCC-C---CCCCCCCCHH
Confidence 1112244678999999998889999999999999999998 99999875432 2222222211 1 1123467899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 248 FASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 248 l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
+.+++.+||..+|++||++.++.+.|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 999999999999999999999987763
No 283
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.5e-37 Score=303.25 Aligned_cols=253 Identities=22% Similarity=0.258 Sum_probs=193.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
++|++.++||+|+||.||+|.+..+++.||+|++..... .+.+..|+++++.+.|.+++. +..++..+...+++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVN-LIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhh-HHHhcccCCeEEEEE
Confidence 579999999999999999999988999999998654322 345788999999998665554 444456778899999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|.++.. ....+++..++.++.||+.||.|||+.||+|+||+|+||++ +.++.++|+|||++........
T Consensus 80 e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 80 EFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred ecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCcc
Confidence 999 455555544 34569999999999999999999999999999999999999 4778999999999986544321
Q ss_pred ccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc---------
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--------- 231 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~--------- 231 (474)
......++..|+|||++.+. .++.++|||||||++|||++|..||...........+..+...
T Consensus 156 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 156 -------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred -------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHh
Confidence 11235688999999998764 4788999999999999999999999754321111111110000
Q ss_pred --------------cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 232 --------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 232 --------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
............++..+.+++..||..+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0001112234567899999999999999999999887753
No 284
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.3e-37 Score=312.81 Aligned_cols=258 Identities=19% Similarity=0.229 Sum_probs=197.3
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEe--------
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVE-------- 74 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~-------- 74 (474)
++++|.+.+.||.|+||.||+|.+..+++.||+|++..... ...+..|+++++.++|++++..+..+...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 57899999999999999999999999999999998765432 34588899999999877766655433322
Q ss_pred -----CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEe
Q 011945 75 -----GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 149 (474)
Q Consensus 75 -----~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~D 149 (474)
....+++|||++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+||+++ ..++.+||+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~~kl~d 158 (342)
T cd07854 83 GSLTELNSVYIVQEYMETDLANVLE--QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLVLKIGD 158 (342)
T ss_pred ccccccceEEEEeecccccHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCceEEECC
Confidence 24678999999989988886 34699999999999999999999999999999999999995 3556899999
Q ss_pred cCCccccccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHH
Q 011945 150 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (474)
||++.......... .......++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.............
T Consensus 159 fg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 159 FGLARIVDPHYSHK----GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred cccceecCCccccc----cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 99997654322111 01122367889999998764 56889999999999999999999999765432111111100
Q ss_pred h----------------------hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 229 S----------------------EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 229 ~----------------------~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
. ..........+...++.++.+|+..||..||++||++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 298 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL 298 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHh
Confidence 0 00111122233456788999999999999999999988774
No 285
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.4e-37 Score=297.37 Aligned_cols=249 Identities=21% Similarity=0.289 Sum_probs=197.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
.+|++.+.||.|+||.||+|.+. .+..+|||++..... ...+..|+++++.+.|++++ .+..+.......+++|||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLV-QLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCee-eEEEEEccCCceEEEEEcC
Confidence 57999999999999999999874 467899998765433 35789999999999866554 4445556667789999998
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 -g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++......+++..++.++.|++.||.|||++||+|+||||+||+++ .++.+||+|||++.........
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~~-- 156 (256)
T cd05112 82 EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVLDDQYT-- 156 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcceeecccCccc--
Confidence 7899999876566789999999999999999999999999999999999994 6788999999999765432211
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
......++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+...... .....
T Consensus 157 ----~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~~----~~~~~ 225 (256)
T cd05112 157 ----SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---SEVVETINAGFRL----YKPRL 225 (256)
T ss_pred ----ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHhCCCCC----CCCCC
Confidence 1122345678999999998889999999999999999998 9999976432 2233332221110 11234
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
.+.++.+|+.+||+.+|++||++.++++.|
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 688999999999999999999999997765
No 286
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=9.1e-38 Score=302.73 Aligned_cols=247 Identities=19% Similarity=0.328 Sum_probs=198.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|++.+.||.|+||.||+|.+..+++.||+|.+..... ...+.+|+++++.+.|++ +..+..++......++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPY-IVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCc-hhhhheeeecCCEEEEEEE
Confidence 468899999999999999999999999999998765432 345888999999998555 4445545566688999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
++ +++|.+++......+++..+..++.||+.||.|||+ .||+|+||||+||+++ ..+.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeecccchhhHHHHh
Confidence 99 589999998655789999999999999999999999 9999999999999995 678899999999876643221
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--CcHHHHHHHHhhccccchHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--GTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~~~~~~~ 239 (474)
....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+..+...... .
T Consensus 157 ---------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~ 223 (265)
T cd06605 157 ---------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP----R 223 (265)
T ss_pred ---------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC----C
Confidence 125788999999999999999999999999999999999999975421 1222222222222111 1
Q ss_pred HhcC-CcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 240 LCRG-YPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 240 l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
+... ++.++.++|..||..+|++||++.+++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 255 (265)
T cd06605 224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELL 255 (265)
T ss_pred CChhhcCHHHHHHHHHHcCCCchhCcCHHHHh
Confidence 1222 788999999999999999999988774
No 287
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2e-37 Score=305.62 Aligned_cols=256 Identities=19% Similarity=0.223 Sum_probs=197.1
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----hHHHHHHHHHHHhcCCCCCceeEEEeEeC--CEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEG--DYN 78 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~l~~E~~il~~l~~~~~i~~l~~~~~~~--~~~ 78 (474)
..++|++.+.||.|+||.||+|.+..+++.|+||.++..... ..+.+|+.+++.+.|.+++ .+..+.... ...
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~-~~~~~~~~~~~~~~ 81 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIV-TVKEVVVGSNLDKI 81 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEE-EEEEEEEecCCCcE
Confidence 346899999999999999999999989999999987654322 2467899999999965544 444444444 789
Q ss_pred EEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 79 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 79 ~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
|++|||++++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||+ +.++.+||+|||++..+..
T Consensus 82 ~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 82 YMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREYGS 158 (293)
T ss_pred EEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeeccC
Confidence 9999999889999998666679999999999999999999999999999999999999 4778999999999987654
Q ss_pred CCCccccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc---
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS--- 234 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~--- 234 (474)
... ......++..|+|||.+.+.. ++.++|||||||++|+|++|..||...........+.........
T Consensus 159 ~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (293)
T cd07843 159 PLK-------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIW 231 (293)
T ss_pred Ccc-------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHH
Confidence 321 112346788999999987654 689999999999999999999999865432222221111100000
Q ss_pred -------------------chH-HHHhcC-CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 235 -------------------TSI-EALCRG-YPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 235 -------------------~~~-~~l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..+ ..+... +++.+.++|..||..+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 232 PGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 111111 4788999999999999999999888754
No 288
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.6e-37 Score=301.33 Aligned_cols=253 Identities=19% Similarity=0.250 Sum_probs=197.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeE-eCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~-~~~~~~lv~ 82 (474)
++|++.++||.|++|.||+|.+..+++.||+|.+..... ...+.+|+++++.+.|++++..+..+.. .....+++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 579999999999999999999999999999998765432 3458899999999987766666555533 345789999
Q ss_pred ecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 83 DLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 83 e~~-g~sL~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
||+ +++|.+++.. ....+++..++.++.||+.||.|||+.||+|+||+|+||+++ .++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCCeEEEeeccccccccc
Confidence 999 7899988753 245689999999999999999999999999999999999994 678899999999875543
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--CcHHHHHHHHhhccccch
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--GTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~~~~ 236 (474)
... ....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ....+....+........
T Consensus 158 ~~~---------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd06621 158 SLA---------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPEL 228 (287)
T ss_pred ccc---------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhh
Confidence 221 234678899999999998999999999999999999999999986532 122222222222111110
Q ss_pred HHHHh--cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 237 IEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 237 ~~~l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..... ..+++++.+++.+||..+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 229 KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00000 234678999999999999999999877643
No 289
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.4e-37 Score=301.27 Aligned_cols=250 Identities=20% Similarity=0.276 Sum_probs=187.5
Q ss_pred eeeeecCceEEEEEEEc--CCCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNI--QTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~--~~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|.+. .++..+|+|.+...... ..+.+|+.+++.++|++++.. ..++.+....++||||+ +
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~-~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQC-LGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeE-EEEEcCCCCcEEEEECCCC
Confidence 46899999999999864 34568999987654322 357889999999987665554 44555667789999999 7
Q ss_pred CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 87 PSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 87 ~sL~~li~~~~----~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||+++ ..+.+||+|||+++.......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~~- 155 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKEDY- 155 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccccccccCcce-
Confidence 89999986432 2467788889999999999999999999999999999994 678999999999975433221
Q ss_pred cccccccCCCCccCccccccccccCC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGI-------EQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~-------~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
+.......++..|+|||++.+. .++.++|||||||++|||++ |..||......... ...+......
T Consensus 156 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~--~~~~~~~~~~ 229 (269)
T cd05087 156 ----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL--TYTVREQQLK 229 (269)
T ss_pred ----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH--HHHhhcccCC
Confidence 1112345678899999998643 35789999999999999996 99999765432211 1112222222
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
...+.+...+++.+.+++..|| .+|++||++++|...|.
T Consensus 230 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2222333457889999999999 68999999999987763
No 290
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.5e-37 Score=313.17 Aligned_cols=264 Identities=18% Similarity=0.246 Sum_probs=201.9
Q ss_pred CCCccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCchHHHHHHHHHHHh-cCCCCCceeEEEeE-e
Q 011945 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKIL-QGGTGIPNLRWFGV-E 74 (474)
Q Consensus 1 m~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~~l~~E~~il~~l-~~~~~i~~l~~~~~-~ 74 (474)
+++.+.++|++.+.||+|+||.||+|.+..+++.||||.+... .....+..|+.++..+ +|.+++..+..+.. .
T Consensus 1 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~ 80 (337)
T cd07852 1 IDKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN 80 (337)
T ss_pred CCchhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC
Confidence 3678899999999999999999999999889999999976432 2234577899999999 65555555544433 3
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
....++||||++++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 81 ~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~---~~~~~kl~d~g~~~ 155 (337)
T cd07852 81 DKDIYLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN---SDCRVKLADFGLAR 155 (337)
T ss_pred CceEEEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccchh
Confidence 457899999999899998873 3789999999999999999999999999999999999994 78899999999998
Q ss_pred ccccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh---
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE--- 230 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~--- 230 (474)
.+....... .......+.||..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+.....
T Consensus 156 ~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07852 156 SLSELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPS 233 (337)
T ss_pred ccccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 765433211 0012234578999999998875 4578999999999999999999999976443222111111100
Q ss_pred --------------------ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 231 --------------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 231 --------------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.........+...++.++.++|..||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 00111222334557899999999999999999999887754
No 291
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3e-37 Score=300.43 Aligned_cols=249 Identities=18% Similarity=0.258 Sum_probs=185.6
Q ss_pred eeeeecCceEEEEEEEcC--CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQ--TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~--~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|.... ....|++|.+..... ...+.+|+.+++.++|++++..+ ..+......+++|||+ +
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~-~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCL-GQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEE-EEECCCCceEEEEEeCCC
Confidence 468999999999997533 345788887654322 23477899999999866655544 4555667789999999 7
Q ss_pred CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 87 PSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 87 ~sL~~li~~~~----~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEeccccccccccchhe
Confidence 89999987533 235678899999999999999999999999999999999 47789999999998754322110
Q ss_pred cccccccCCCCccCccccccccccC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHH-Hhhccc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLG-------IEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEK-ISEKKV 233 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~-------~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~-i~~~~~ 233 (474)
.......++..|+|||++.. ..++.++|||||||++|||++ |..||...... ..+.. +.....
T Consensus 157 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~~~~~~~~~~ 228 (269)
T cd05042 157 -----ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE---QVLKQVVREQDI 228 (269)
T ss_pred -----eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHHHHHhhccCc
Confidence 01123356788999998753 357889999999999999999 88999765332 22222 222222
Q ss_pred cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 234 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 234 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
....+.+...++..+.+++..|| .||++||++++|.++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 22223344578899999999999 59999999999988763
No 292
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.8e-37 Score=302.21 Aligned_cols=234 Identities=23% Similarity=0.301 Sum_probs=182.1
Q ss_pred eeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhc--CCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~--~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
.||+|+||.||++.+..+++.||||++..... ......|..+++.+. +++++..+..+...++..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999999999999998754321 122445555555443 4566666666666777889999998
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
+++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||+ +.++.++|+|||++........
T Consensus 81 ~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~~---- 152 (279)
T cd05633 81 GGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKP---- 152 (279)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccCc----
Confidence 8899888864 4569999999999999999999999999999999999999 4778999999999975543221
Q ss_pred ccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCC
Q 011945 166 PYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 244 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 244 (474)
....||..|+|||++.+ ..++.++|||||||++|||++|..||.......... ...... .....++..+
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~----~~~~~~~~~~ 222 (279)
T cd05633 153 -----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTL----TVNVELPDSF 222 (279)
T ss_pred -----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHhh----cCCcCCcccc
Confidence 23468999999999874 568999999999999999999999998654433222 221111 1111234568
Q ss_pred cHHHHHHHHHHhcCCCCCCCC
Q 011945 245 PTEFASYFHYCRSLRFDDKPD 265 (474)
Q Consensus 245 p~~l~~li~~cl~~dp~~RPt 265 (474)
+.++.++|..||..||++||+
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcC
Confidence 899999999999999999994
No 293
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.8e-37 Score=306.65 Aligned_cols=252 Identities=19% Similarity=0.325 Sum_probs=200.2
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
-.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+..|+.++..+..++++..+..++......+++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 35789999999999999999999988899999999865432 234666777777777677777777777888899999
Q ss_pred EecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||++++|.+++......+++..+..++.||+.||.|||+ .||+||||+|+||++ +.++.+||+|||++..+....
T Consensus 93 ~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 93 MELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhccCCC
Confidence 9999999999988666789999999999999999999997 699999999999999 467899999999997664432
Q ss_pred CccccccccCCCCccCccccccccccCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~----~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
.. ....++..|+|||++.+.. ++.++|||||||++|+|++|+.||..... ..+.+..+.......
T Consensus 170 ~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~- 238 (296)
T cd06618 170 AK--------TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT--EFEVLTKILQEEPPS- 238 (296)
T ss_pred cc--------cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh--HHHHHHHHhcCCCCC-
Confidence 21 2235788999999987654 78999999999999999999999975322 122233322221111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.+ ....++.++.+|+.+||..||++||+++++++
T Consensus 239 ~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 239 LP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred CC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 11247889999999999999999999888754
No 294
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.4e-37 Score=296.55 Aligned_cols=245 Identities=22% Similarity=0.323 Sum_probs=194.4
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
++||.|+||.||+|.+.. ++.||+|++..... ...+..|+++++.+.|. ++..+..++......+++||++ +++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHP-NIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCC-CeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 479999999999999876 99999998765433 24688899999999865 4555556667777889999998 889
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccc
Q 011945 89 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 168 (474)
Q Consensus 89 L~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (474)
|.+++......+++..++.++.|++.||.|||+++|+||||||+|||+ +.++.+||+|||++..........
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~----- 150 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTV----- 150 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeeccccccccCCccee-----
Confidence 999997655678999999999999999999999999999999999999 477899999999997654221100
Q ss_pred cCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHH
Q 011945 169 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 247 (474)
Q Consensus 169 ~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 247 (474)
......++..|+|||.+.+..++.++|||||||++|||++ |..||......... ..+... ... .....+|.+
T Consensus 151 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~---~~~~~~-~~~---~~~~~~~~~ 223 (251)
T cd05041 151 SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR---ERIESG-YRM---PAPQLCPEE 223 (251)
T ss_pred ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH---HHHhcC-CCC---CCCccCCHH
Confidence 0012234677999999998889999999999999999999 89999775432222 222111 111 123467899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 248 FASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 248 l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
+.+++.+||..+|++||++.+|++.|+
T Consensus 224 ~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 224 IYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 999999999999999999999988775
No 295
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.9e-37 Score=308.70 Aligned_cols=252 Identities=21% Similarity=0.242 Sum_probs=199.5
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
.+.++|++.+.||.|+||.||+|.+..+++.||||.+... .....+..|+.+++.+.|++++..+..+.......+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 3678999999999999999999999999999999976432 223567889999999998777776666655567789
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 80 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 80 lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
++||+++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||+ +..+.++|+|||++......
T Consensus 87 lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~~~ 161 (328)
T cd07856 87 FVTELLGTDLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQDPQ 161 (328)
T ss_pred EEeehhccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccCCC
Confidence 999999999998886 4468999999999999999999999999999999999999 46789999999999754321
Q ss_pred CCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHh---------
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS--------- 229 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~--------- 229 (474)
. ....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...........+.+..
T Consensus 162 ~----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 162 M----------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred c----------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 1 23467889999998876 568999999999999999999999997643211111111110
Q ss_pred --------------hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 230 --------------EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 230 --------------~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
......+.......+++++.++|.+||..+|++||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 00011122334456789999999999999999999987763
No 296
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.1e-37 Score=297.02 Aligned_cols=248 Identities=26% Similarity=0.398 Sum_probs=198.5
Q ss_pred EEEeeeeeecCceEEEEEEEcCCC----eEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTN----EEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~----~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
+.+.+.||.|+||.||+|.+...+ ..||+|++..... ...+..|+.+++.+.| +++..+..+.......+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDH-PNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCC-CchheEEEEEcCCCeeEEE
Confidence 467899999999999999998766 8999999865543 3468899999999964 5555565556666788999
Q ss_pred EecC-CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 82 IDLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~-l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
||++ +++|.+++...... +++..++.++.||+.||.|||+.||+|+||||+||+++ ..+.++|+|||++......
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEEEcccCCceecccc
Confidence 9998 88999999754434 99999999999999999999999999999999999994 6779999999999876554
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
.... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||..... ...+..+......
T Consensus 157 ~~~~------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~---- 223 (258)
T smart00219 157 DYYK------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVLEYLKKGYRL---- 223 (258)
T ss_pred cccc------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhcCCCC----
Confidence 2211 112237789999999988889999999999999999998 8899976432 3333333332221
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
.....++.++.+++.+||..+|++||++.++++.|
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 12345789999999999999999999999987653
No 297
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.6e-37 Score=296.51 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=205.0
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
++|++.+.||.|++|.||+|.+..+++.|+||++..... ...+..|+.++..++|+ ++..+..+.......+++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESP-YVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCC-CeeeEEEEEccCCeEEEEEE
Confidence 479999999999999999999999999999998876543 45688999999999854 55556556667788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++... ..+++..++.++.||+.||.|||+ .|++|+||+|+||++ +.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 80 YMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred ecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCCC
Confidence 99 69999999743 679999999999999999999999 999999999999999 4788999999999987654332
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
. .....++..|+|||.+.+..++.++||||||+++|+|++|..||.........+....+..... ..+.
T Consensus 156 ~-------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~ 224 (264)
T cd06623 156 Q-------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP----PSLP 224 (264)
T ss_pred c-------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC----CCCC
Confidence 1 1234688999999999998899999999999999999999999987653333444444332221 1223
Q ss_pred cC-CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 242 RG-YPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 242 ~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.. ++..+.++|..||..+|++||++.++++
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 44 7899999999999999999999887754
No 298
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3e-37 Score=297.82 Aligned_cols=246 Identities=21% Similarity=0.243 Sum_probs=200.3
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++.++||+|+||.||++.+..+++.||||.+.... ....+.+|+.+++.++|.+ +..+..+.......+++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPN-IVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCC-eeeeEeeecCCCeEEEEEe
Confidence 6999999999999999999999999999999876432 2346889999999998655 5555556677788999999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||+|+|||++ .++.++|+|||++..+.....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEEeeccceeecCcchh
Confidence 98 88999998753 33689999999999999999999999999999999999994 678899999999986644321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
. .....|+..|+|||++.+..++.++|||||||++|+|++|+.||... .....+..+...... ...
T Consensus 157 ~-------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~---~~~~~~~~~~~~~~~----~~~ 222 (256)
T cd08218 157 L-------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG---NMKNLVLKIIRGSYP----PVS 222 (256)
T ss_pred h-------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC---CHHHHHHHHhcCCCC----CCc
Confidence 1 12346889999999999988999999999999999999999999753 233333333332221 223
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..++.++.++|.+||+.+|++||++.++++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 567899999999999999999999888754
No 299
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=8e-37 Score=307.39 Aligned_cols=256 Identities=19% Similarity=0.240 Sum_probs=195.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcCC--CeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEe----EeCCE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQT--NEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFG----VEGDY 77 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~--~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~----~~~~~ 77 (474)
+|++.+.||+|+||.||++.+..+ +..||||.+.... ....+..|+.+++.+.+|++|..+..+. .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 589999999999999999999877 8899999875422 2345788999999997566666654432 22356
Q ss_pred EEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 78 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
.+++|++++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.+.
T Consensus 81 ~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---ADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CCCCEEeCcCCCceecc
Confidence 789999999999999863 45799999999999999999999999999999999999994 67889999999998765
Q ss_pred cCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHH---------
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK--------- 227 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~--------- 227 (474)
...... ........||..|+|||++.+ ..++.++|||||||++|+|++|+.||...........+..
T Consensus 157 ~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 157 ENPGEN---AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred cccccc---cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 432211 011234578999999998876 4689999999999999999999999976432111111110
Q ss_pred ---Hhh-----------ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 228 ---ISE-----------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 228 ---i~~-----------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
+.. .........+...++.++.+++.+||..||++||++.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000 0001122333345678999999999999999999988763
No 300
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.1e-37 Score=301.38 Aligned_cols=245 Identities=21% Similarity=0.339 Sum_probs=196.1
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhc--CCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~--~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.|++.+.||.|+||.||+|.+..+++.||||++..... ...+.+|+.+++.+. .++++..+..++..+...+++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 58899999999999999999999999999998765422 345788999999997 2455555555667788899999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+|+||+|+||+++ ..+.++|+|||++..+.....
T Consensus 82 e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 82 EYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred ecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCceeecCCCcc
Confidence 999 8899999863 4799999999999999999999999999999999999995 678999999999987654332
Q ss_pred ccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
. .....|+..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.... .....+.... .+.+
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~---~~~~~~~~~~----~~~~ 222 (277)
T cd06917 157 K-------RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF---RAMMLIPKSK----PPRL 222 (277)
T ss_pred c-------cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh---hhhhccccCC----CCCC
Confidence 1 123478999999999875 44789999999999999999999999764321 1111111111 1112
Q ss_pred hc-CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 241 CR-GYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 241 ~~-~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.. .++.++.+++..||..||++||++.++++
T Consensus 223 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 223 EDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 22 37889999999999999999999888754
No 301
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.6e-37 Score=296.89 Aligned_cols=245 Identities=25% Similarity=0.361 Sum_probs=197.6
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-------CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-------~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
+|+..+.||+|+||.||+|.+..+++.|++|.+.... ....+..|+.+++.++|.+ +..+..+...+...++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~-i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPN-IVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCC-chheeeeEecCCeEEE
Confidence 5888999999999999999998899999999875533 2245888999999998655 4455556677788899
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
+|||+ +++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||||+||+++ .++.+||+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 80 FLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccceecccc
Confidence 99999 7899999874 34689999999999999999999999999999999999994 6789999999998865443
Q ss_pred CCccccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
.. .....|+..|++||.+.... ++.++|+|||||++|+|++|..||..... ......+.... ...
T Consensus 156 ~~--------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~---~~~~~~~~~~~---~~~ 221 (258)
T cd06632 156 SF--------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG---VAAVFKIGRSK---ELP 221 (258)
T ss_pred cc--------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH---HHHHHHHHhcc---cCC
Confidence 21 13457899999999998776 89999999999999999999999976442 22222222111 112
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.+...+++.+.+++.+||..+|++||++.+++.
T Consensus 222 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 222 PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 234567899999999999999999999887753
No 302
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.8e-37 Score=306.07 Aligned_cols=246 Identities=22% Similarity=0.311 Sum_probs=196.7
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
....|.+.++||.|+||.||+|.+..+++.||+|++..... ...+..|+.+++.++|++ +..+..++..+...+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN-TIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCC-EEEEEEEEEeCCeEE
Confidence 34679999999999999999999988999999998754321 135788999999998554 555555566777889
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 80 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 80 lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
+||||+.++|.+++......+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.++|+|||++......
T Consensus 92 lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 92 LVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGTVKLADFGSASLVSPA 168 (307)
T ss_pred EEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CCCCEEEeecCcceecCCC
Confidence 9999999999998876667799999999999999999999999999999999999994 7789999999998754322
Q ss_pred CCccccccccCCCCccCcccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
....++..|+|||++. ...++.++|||||||++|||++|..||.+... ......+........
T Consensus 169 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~ 234 (307)
T cd06607 169 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNDSPTL 234 (307)
T ss_pred -----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH---HHHHHHHhcCCCCCC
Confidence 2346888999999885 35588999999999999999999999976432 121222221111110
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
....++.++.++|..||..+|++||++.+|+.
T Consensus 235 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 235 ---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred ---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 11346789999999999999999999888754
No 303
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5.1e-38 Score=304.31 Aligned_cols=240 Identities=19% Similarity=0.223 Sum_probs=183.4
Q ss_pred eeeeecCceEEEEEEEcCCCe-------EEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 13 RKIGSGSFGEIYLGTNIQTNE-------EVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~-------~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+.||.|+||.||+|.+...+. .|++|+...... .+.+..|+.+++.+.|++.+. +..++..+...++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~-~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVL-NYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhh-eeeEEEeCCCcEEEEe
Confidence 469999999999999865543 488887654322 245788999999998665554 4445556667889999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC-----CCeEEEEecCCccccc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-----ANQVYIIDFGLAKRYR 157 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~-----~~~vkL~DFGla~~~~ 157 (474)
|+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++. .+.++|+|||++....
T Consensus 80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 99 78999999865667999999999999999999999999999999999999963221 1347999999987543
Q ss_pred cCCCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCC-CCCCCCCcCcHHHHHHHHhhccccc
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGS-LPWQGLKAGTKKQKYEKISEKKVST 235 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~-~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (474)
.. ....++..|+|||++.+. .++.++|||||||++|||++|. .||....... .. .+....
T Consensus 160 ~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~---~~-~~~~~~--- 221 (258)
T cd05078 160 PK-----------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK---KL-QFYEDR--- 221 (258)
T ss_pred Cc-----------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH---HH-HHHHcc---
Confidence 22 234688899999999874 5799999999999999999984 6665433211 11 111111
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
..++...+.++.+++..||+.||++||++++|++.|
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 222 --HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred --ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 122334567899999999999999999999988765
No 304
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.2e-37 Score=305.09 Aligned_cols=259 Identities=20% Similarity=0.236 Sum_probs=199.7
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEe-----
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 74 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~----- 74 (474)
+..++|++.++||.|+||.||+|.+..+++.||||+++... ....+..|+.+++.++|++++..+..+...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578999999999999999999999899999999886532 223577899999999876666655443322
Q ss_pred ----CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEec
Q 011945 75 ----GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (474)
Q Consensus 75 ----~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DF 150 (474)
....++++||++++|.+++......+++..++.++.||+.||.|||+.||+|+||||+||++ +.++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeCcc
Confidence 23789999999889988887555579999999999999999999999999999999999999 47789999999
Q ss_pred CCccccccCCCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHh
Q 011945 151 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 229 (474)
Q Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~ 229 (474)
|++..+...... ......++..|+|||++.+. .++.++|||||||++|||++|+.||...........+....
T Consensus 161 g~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~ 234 (302)
T cd07864 161 GLARLYNSEESR------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLC 234 (302)
T ss_pred cccccccCCccc------ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 999876543321 11223567889999988754 47899999999999999999999997643322222222221
Q ss_pred hcccc----------------------chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 230 EKKVS----------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 230 ~~~~~----------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..... .........+|..+.+++..||..+|++||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11110 0111223457899999999999999999999887753
No 305
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.4e-37 Score=299.38 Aligned_cols=252 Identities=18% Similarity=0.313 Sum_probs=199.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcC-----CCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
++|++++.||.|+||.||+|+++. ..+.|++|........ ..+..|+++++.++|.+ +..+..++......
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKN-VVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcc-eeeeEEEECCCCcc
Confidence 679999999999999999999754 3467999987654332 46889999999998655 45555566677788
Q ss_pred EEEEecC-CCCHHHHHHHcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEe
Q 011945 79 VLVIDLL-GPSLEDLFNFCS--------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 149 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~--------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~D 149 (474)
+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ ..+.++|+|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCCcEEEcc
Confidence 9999999 789999987433 1589999999999999999999999999999999999995 678899999
Q ss_pred cCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHH
Q 011945 150 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i 228 (474)
||++........ .......++..|+|||.+.+..++.++|||||||++|+|++ |..||..... ...+..+
T Consensus 161 ~~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---~~~~~~~ 231 (275)
T cd05046 161 LSLSKDVYNSEY------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---EEVLNRL 231 (275)
T ss_pred cccccccCcccc------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---HHHHHHH
Confidence 999875432211 11233466788999999998889999999999999999998 8999976433 2233333
Q ss_pred hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 229 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
........ ....+|..+.+++.+||..+|++||++.+++..|.
T Consensus 232 ~~~~~~~~---~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 QAGKLELP---VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HcCCcCCC---CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 22222111 23467899999999999999999999999988764
No 306
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.2e-37 Score=298.45 Aligned_cols=251 Identities=24% Similarity=0.398 Sum_probs=197.1
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC------------chHHHHHHHHHHHhcCCCCCceeEEEeEeC
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------------HPQLQYEAKLYKILQGGTGIPNLRWFGVEG 75 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------------~~~l~~E~~il~~l~~~~~i~~l~~~~~~~ 75 (474)
+|.+.+.||.|+||.||+|.+..+++.||||.+..... .+.+..|+.+++.+.|.+ +..+..++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLN-IVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCC-cceEEEEeccC
Confidence 68999999999999999999988999999997653211 124678999999998655 44555566777
Q ss_pred CEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 76 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 76 ~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
...++||||+ +++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||++ +.++.++|+|||+++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~ 156 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISK 156 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeeccccc
Confidence 8889999998 88999998754 579999999999999999999999999999999999999 478899999999997
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 232 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~--~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (474)
........ .......|+..|+|||.+.+.. ++.++||||||+++|+|++|..||..... ...+..+....
T Consensus 157 ~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~ 228 (272)
T cd06629 157 KSDDIYDN-----DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA---IAAMFKLGNKR 228 (272)
T ss_pred cccccccc-----cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch---HHHHHHhhccc
Confidence 65432111 1123456899999999988755 78999999999999999999999965322 22222222111
Q ss_pred -ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 -VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 -~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
...........++.++.+++..||..+|++||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 229 SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 111112233567899999999999999999999888754
No 307
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.9e-37 Score=298.74 Aligned_cols=248 Identities=23% Similarity=0.347 Sum_probs=196.9
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||.|+||.||+|.+..+++.||||++..... ...+..|..++.....++++..+..+...++..+++|||+ +
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 579999999999999988999999998764321 1234556555555545666777767777788999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++.. ...+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.++|+|||++......
T Consensus 82 ~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~------- 150 (260)
T cd05611 82 GDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLEN------- 150 (260)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccceecccc-------
Confidence 899999974 35789999999999999999999999999999999999994 6788999999998754331
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
....|+..|+|||.+.+..++.++||||||+++|+|++|..||..... ...+..+....... .......+++
T Consensus 151 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~ 222 (260)
T cd05611 151 ----KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---DAVFDNILSRRINW-PEEVKEFCSP 222 (260)
T ss_pred ----ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcccCC-CCcccccCCH
Confidence 234688999999999988899999999999999999999999976433 33333333222111 1122346789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 247 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
++.+++.+||..+|++||++..+.++|.+.+.+
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~ 255 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEIKSHPFFK 255 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHHHcChHhh
Confidence 999999999999999999988888888776653
No 308
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.8e-37 Score=301.59 Aligned_cols=249 Identities=20% Similarity=0.305 Sum_probs=191.8
Q ss_pred eeeeecCceEEEEEEEcCCC------eEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 13 RKIGSGSFGEIYLGTNIQTN------EEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~------~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+.||+|+||.||+|++.... +.||||.+.... ....+.+|+.+++.++|++++..+ .++......+++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLL-GVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEe-eeecCCCCeEEEEe
Confidence 46899999999999976544 689999765432 334688899999999876655544 44556677899999
Q ss_pred cC-CCCHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCC--CCCeEEEEecCCcc
Q 011945 84 LL-GPSLEDLFNFC------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGLAK 154 (474)
Q Consensus 84 ~~-g~sL~~li~~~------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~--~~~~vkL~DFGla~ 154 (474)
|+ +++|.+++... ...+++..++.++.||+.||.|||+++|+|+||||+|||++.++ ....++|+|||++.
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 88 78999998642 23478999999999999999999999999999999999996322 22389999999997
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccc
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKV 233 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (474)
........ .......++..|+|||++.+..++.++|||||||++|||++ |..||..... .+....+....
T Consensus 160 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---~~~~~~~~~~~- 230 (269)
T cd05044 160 DIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---QEVLQHVTAGG- 230 (269)
T ss_pred cccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---HHHHHHHhcCC-
Confidence 65433221 11123356789999999999999999999999999999998 9999976432 22222222211
Q ss_pred cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 234 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 234 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
.......+|..+.+++.+||..+|++||++++|.+.|+
T Consensus 231 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 ---RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ---ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11123467899999999999999999999999988875
No 309
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1e-36 Score=298.62 Aligned_cols=251 Identities=22% Similarity=0.263 Sum_probs=193.5
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhc--CCCCCceeEEEeEeCCE-----
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDY----- 77 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~--~~~~i~~l~~~~~~~~~----- 77 (474)
|++.+.||.|+||.||+|++..+++.||||++..... ...+..|+.+++.+. .|+++..+..++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 7899999999999999999988899999998864332 234667888888875 24555555555544444
Q ss_pred EEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 78 NVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
.+++||++.++|.+++.... ..+++..++.++.||+.||.|||+.+|+|+||||+||+++ .++.+||+|||++..+
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---SDGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---cCCCEEEeccCcceec
Confidence 89999999889999887543 3699999999999999999999999999999999999994 6689999999999876
Q ss_pred ccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh------
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE------ 230 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~------ 230 (474)
..... .....++..|+|||++.+..++.++|||||||++|||++|..||.+....+....+.....
T Consensus 158 ~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 158 SFEMA--------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEE 229 (287)
T ss_pred cCCcc--------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHh
Confidence 44321 1233578899999999999999999999999999999999999987543222221111000
Q ss_pred -------------ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 231 -------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 231 -------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.............+++++.++|..||..||++||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 0001111222234568889999999999999999988775
No 310
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=9.1e-38 Score=305.53 Aligned_cols=245 Identities=23% Similarity=0.326 Sum_probs=197.1
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+.|++.+.||+|+||.||+|.+..+++.||||++..... ...+..|+.+++.+.|.+++. +..++..+...++|||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e 82 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITR-YYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHh-hhcccccCCceEEEEE
Confidence 457788999999999999999988999999998764432 235788999999998655544 5445566778899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++. ...+++..++.++.||+.||.|||++||+|+||+|+||+++ .++.++|+|||++..+......
T Consensus 83 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 83 YLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred ccCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEccccccccccCcchh
Confidence 99 789988886 45789999999999999999999999999999999999995 6788999999999766543211
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.....|+..|+|||++.+..++.++|||||||++|||++|..||......... ..+.... ...+..
T Consensus 158 -------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~~~~----~~~~~~ 223 (277)
T cd06642 158 -------RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL---FLIPKNS----PPTLEG 223 (277)
T ss_pred -------hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH---hhhhcCC----CCCCCc
Confidence 12346889999999999989999999999999999999999999765432211 1111111 112334
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.++.++.+++..||..+|++||++.++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 57889999999999999999999998865
No 311
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=8.4e-37 Score=308.86 Aligned_cols=251 Identities=22% Similarity=0.298 Sum_probs=197.2
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeC-----
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG----- 75 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~----- 75 (474)
+.++|++.+.||+|+||.||+|.+..++..||||.+..... ...+..|+.+++.++|++++..+..+....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 67899999999999999999999999999999998754321 235788999999999777776665554332
Q ss_pred CEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 76 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 76 ~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
..++++|++++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+|||++ ..+.++|+|||++..
T Consensus 93 ~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~dfg~~~~ 167 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ 167 (343)
T ss_pred ceEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccccc
Confidence 3468999999999999886 45799999999999999999999999999999999999994 678899999999976
Q ss_pred cccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc---
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--- 231 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~--- 231 (474)
..... ....++..|+|||++.+ ..++.++|||||||++|+|++|..||.+.........+..+...
T Consensus 168 ~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 168 TDSEM----------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred cccCc----------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 54321 23467899999999876 45889999999999999999999999864332111111111000
Q ss_pred --------------------cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 232 --------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 232 --------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
........+...+++++.++|..||..||++||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 000112223356788899999999999999999987765
No 312
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-38 Score=323.50 Aligned_cols=250 Identities=20% Similarity=0.374 Sum_probs=209.0
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEE---EEEecc---CCCchHHHHHHHHHHHhcCCCCCceeE-EEeEeCCEEEEE
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVA---IKLENV---KTKHPQLQYEAKLYKILQGGTGIPNLR-WFGVEGDYNVLV 81 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vA---vK~~~~---~~~~~~l~~E~~il~~l~~~~~i~~l~-~~~~~~~~~~lv 81 (474)
.+...+||+|+|-+||+|.|..+|.+|| ||+-+. ....+.|..|+.+|+.|+|.|+|..+. |.........+|
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence 3566789999999999999999999887 453222 223356889999999999988888884 445566778889
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~--gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
.|++ .|+|..+++. .++++.+.+..|+.||+.||.|||++ -|||||||.+||+|+ ...|.|||+|+|||.....
T Consensus 122 TEL~TSGtLr~Y~kk-~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 122 TELFTSGTLREYRKK-HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred eecccCCcHHHHHHH-hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhc
Confidence 9988 9999999985 45799999999999999999999997 499999999999997 6789999999999998776
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
... +.++|||.|||||++. ..|+..+||||||++|+||+|+..||.... ...+.|.++.....+..+.
T Consensus 199 s~a---------ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~--n~AQIYKKV~SGiKP~sl~ 266 (632)
T KOG0584|consen 199 SHA---------KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT--NPAQIYKKVTSGIKPAALS 266 (632)
T ss_pred ccc---------ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC--CHHHHHHHHHcCCCHHHhh
Confidence 543 4479999999999998 689999999999999999999999998864 4578888888877766554
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
.+. .+++++||.+||.. ..+||++.+| |.+.|-..
T Consensus 267 kV~---dPevr~fIekCl~~-~~~R~sa~eL---L~d~Ff~~ 301 (632)
T KOG0584|consen 267 KVK---DPEVREFIEKCLAT-KSERLSAKEL---LKDPFFDE 301 (632)
T ss_pred ccC---CHHHHHHHHHHhcC-chhccCHHHH---hhChhhcc
Confidence 443 58999999999999 9999996665 55555443
No 313
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.6e-37 Score=298.13 Aligned_cols=242 Identities=19% Similarity=0.253 Sum_probs=190.5
Q ss_pred CCcEEEeeee--eecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKI--GSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~L--G~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.++|++.+.+ |+|+||.||++.++.+++.+|+|+....... ..|+.+...+.+++++..+...+......++|||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e 89 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---AIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMD 89 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---hhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEE
Confidence 3567787777 9999999999999999999999987653221 1244444445557777777777777789999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCC-eEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~-~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+||+++ ..+ .++|+|||++......
T Consensus 90 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~~l~dfg~~~~~~~~-- 163 (267)
T PHA03390 90 YIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD---RAKDRIYLCDYGLCKIIGTP-- 163 (267)
T ss_pred cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe---CCCCeEEEecCccceecCCC--
Confidence 98 88999999754 4899999999999999999999999999999999999995 445 8999999998765432
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH-HHHHHHHhhccccchHHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~l 240 (474)
....|+..|+|||++.+..++.++|||||||++|||++|..||........ ...+..... . ....
T Consensus 164 ---------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~-~~~~ 229 (267)
T PHA03390 164 ---------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ----K-KLPF 229 (267)
T ss_pred ---------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc----c-cCCc
Confidence 224688999999999998999999999999999999999999985433221 111111111 1 1122
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCC-HHHHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPD-YAYLK 270 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt-~~~l~ 270 (474)
...+++.+.++|..||+.+|++||+ +++++
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 230 IKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred ccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 3468899999999999999999995 56664
No 314
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=6.2e-37 Score=308.34 Aligned_cols=265 Identities=19% Similarity=0.245 Sum_probs=200.6
Q ss_pred CCCccCCcEEEe-eeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----------------hHHHHHHHHHHHhcCCC
Q 011945 1 MEPRVGNKFRLG-RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----------------PQLQYEAKLYKILQGGT 63 (474)
Q Consensus 1 m~~~i~~~y~i~-~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----------------~~l~~E~~il~~l~~~~ 63 (474)
|...+.++|..+ +.||.|+||+||+|.+..+++.||||++...... ..+..|+.+++.++|.+
T Consensus 2 ~~~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 81 (335)
T PTZ00024 2 MSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHEN 81 (335)
T ss_pred CccccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcc
Confidence 677788999754 6799999999999999999999999987543221 14778999999998665
Q ss_pred CCceeEEEeEeCCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCC
Q 011945 64 GIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 143 (474)
Q Consensus 64 ~i~~l~~~~~~~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~ 143 (474)
++. +..++..+.+.+++||++.++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++ ..+
T Consensus 82 iv~-~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~~~ 156 (335)
T PTZ00024 82 IMG-LVDVYVEGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---SKG 156 (335)
T ss_pred eee-eeEEEecCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---CCC
Confidence 555 4455567788999999999999999873 45699999999999999999999999999999999999994 778
Q ss_pred eEEEEecCCccccccCCCccc-------cccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCC
Q 011945 144 QVYIIDFGLAKRYRDTATHQH-------IPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQG 215 (474)
Q Consensus 144 ~vkL~DFGla~~~~~~~~~~~-------~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~ 215 (474)
.++|+|||++..+........ ..........++..|+|||.+.+.. ++.++|||||||++|||++|..||.+
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 236 (335)
T PTZ00024 157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG 236 (335)
T ss_pred CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999987652211000 0000112235688999999998754 68999999999999999999999987
Q ss_pred CCcCcHHHHHHHHhhcc--------------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 216 LKAGTKKQKYEKISEKK--------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 216 ~~~~~~~~~~~~i~~~~--------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.........+....... ...........++.++.++|..||..+|++||++++++
T Consensus 237 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 311 (335)
T PTZ00024 237 ENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEAL 311 (335)
T ss_pred CCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHh
Confidence 54322111111111000 01112223345678999999999999999999987774
No 315
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=8.8e-37 Score=299.12 Aligned_cols=252 Identities=19% Similarity=0.227 Sum_probs=195.0
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
|++.++||.|++|.||+|.+..+|..||||++..... ...+..|+.+++.++|++.+..+ .++..+...+++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~-~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLL-DVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHh-heeccCCeEEEEEec
Confidence 6789999999999999999989999999998765432 24578899999999966555544 445667889999999
Q ss_pred CCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 85 LGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 85 ~g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
++++|.+++.... ..+++..++.++.||+.||.|||+++++|+||+|+||+++ .++.++|+|||++..+.....
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 80 LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred cCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeecccccccCCCcc--
Confidence 9889999987433 3689999999999999999999999999999999999995 688999999999976533211
Q ss_pred ccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHh-------------
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS------------- 229 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~------------- 229 (474)
......++..|+|||++.+. .++.++|||||||++|+|++|+.||...........+....
T Consensus 155 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 -----TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred -----ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 11223568899999988764 47899999999999999999999997643311111111000
Q ss_pred --------hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 230 --------EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 230 --------~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..............++.++.+++.+||+.+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000011122234567889999999999999999999887753
No 316
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.6e-37 Score=296.20 Aligned_cols=247 Identities=22% Similarity=0.294 Sum_probs=198.3
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|.+.+.||.|+||.||+|.+..++..||+|.+... .....+.+|+.+++.++|.+.+..+ .........++++|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~-~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF-ASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhh-heeccCCeEEEEEe
Confidence 589999999999999999999999999999987653 2345688999999999866555544 45566778899999
Q ss_pred cC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 84 LL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 84 ~~-g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
|+ +++|.+++.... ..+++..++.++.||+.||.|||+++|+|+||||+||+++ ++...+||+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS--KNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEc--CCCCeEEecccccchhccCCcc
Confidence 99 889999986433 3589999999999999999999999999999999999995 3335679999999987654322
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
. .....|+..|+|||++.+..++.++|||||||++|||++|..||..... .+.+..+..... ..+.
T Consensus 158 ~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~ 223 (257)
T cd08225 158 L-------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL---HQLVLKICQGYF----APIS 223 (257)
T ss_pred c-------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHhcccC----CCCC
Confidence 1 1234689999999999988899999999999999999999999976432 223333222221 1223
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..++.++.+++.+||..+|++||++.+|++
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 467889999999999999999999888754
No 317
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.1e-36 Score=308.32 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=195.2
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEe-----
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 74 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~----- 74 (474)
.+.++|.+.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.++|.+++..+..+...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence 356899999999999999999999989999999998764321 24577899999999987777666554322
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
....++++++++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.
T Consensus 94 ~~~~~lv~~~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~dfg~~~ 168 (345)
T cd07877 94 FNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLAR 168 (345)
T ss_pred cccEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc---CCCCEEEecccccc
Confidence 24578999999999999886 34699999999999999999999999999999999999994 67889999999987
Q ss_pred ccccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc--
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-- 231 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-- 231 (474)
..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+......
T Consensus 169 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (345)
T cd07877 169 HTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 238 (345)
T ss_pred ccccc----------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 54322 123578899999999877 46889999999999999999999999764332211111111000
Q ss_pred ---------------------cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 232 ---------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 232 ---------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.............++++.++|..||..||++||++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 298 (345)
T cd07877 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 298 (345)
T ss_pred HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHh
Confidence 000011111224578899999999999999999977664
No 318
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=7.5e-37 Score=296.95 Aligned_cols=249 Identities=24% Similarity=0.357 Sum_probs=196.3
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-------CchHHHHHHHHHHHhcCCCCCceeEEEeE-eCCEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-------KHPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYN 78 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-------~~~~l~~E~~il~~l~~~~~i~~l~~~~~-~~~~~ 78 (474)
.+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.++|.+++..+..+.. .....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 57999999999999999999999999999999864321 12357889999999987766665554433 34567
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+++||++ +++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECccccccccc
Confidence 8999998 7899999874 34689999999999999999999999999999999999994 67889999999998654
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
...... .......|+..|+|||++.+..++.++|||||||++|+|++|+.||..... ...+..+.. ....
T Consensus 158 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~---~~~~ 227 (264)
T cd06653 158 TICMSG----TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA---MAAIFKIAT---QPTK 227 (264)
T ss_pred cccccC----ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH---HHHHHHHHc---CCCC
Confidence 321100 011245689999999999998899999999999999999999999976432 222222221 1122
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
+.++..+++++.+++.+||. ++..||+..+++
T Consensus 228 ~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~ 259 (264)
T cd06653 228 PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLL 259 (264)
T ss_pred CCCCcccCHHHHHHHHHHhc-CcccCccHHHHh
Confidence 33456788999999999999 579999988664
No 319
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.1e-36 Score=296.31 Aligned_cols=248 Identities=21% Similarity=0.288 Sum_probs=192.4
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
+.....||+|+||.||+|.+..++..|++|.+..... ...+.+|+.+++.++|.+++. +..++..+...++++|++
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e~~~ 88 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQ-YLGSDSENGFFKIFMEQVP 88 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeee-eeeeeccCCEEEEEEecCC
Confidence 3345689999999999999988999999998765432 346889999999998665554 555566778889999998
Q ss_pred CCCHHHHHHHcCCCC--CHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 86 GPSLEDLFNFCSRKL--SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 86 g~sL~~li~~~~~~l--~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+++|.+++......+ ++..++.++.||+.||.|||++||+||||||+||+++ ...+.++|+|||++........
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg~~~~~~~~~~-- 164 (268)
T cd06624 89 GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFGTSKRLAGINP-- 164 (268)
T ss_pred CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecchhheecccCCC--
Confidence 789999987544455 8889999999999999999999999999999999995 3367899999999976543221
Q ss_pred ccccccCCCCccCccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~--~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
......|+..|+|||++.+.. ++.++|||||||++|+|++|..||........ ... ... .......+.
T Consensus 165 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-~~~-~~~---~~~~~~~~~ 234 (268)
T cd06624 165 -----CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-AMF-KVG---MFKIHPEIP 234 (268)
T ss_pred -----ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-hHh-hhh---hhccCCCCC
Confidence 112346899999999987654 78999999999999999999999976432111 111 111 001111234
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..+++++.+++.+||..+|++||++.++++
T Consensus 235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 567889999999999999999999887753
No 320
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2e-37 Score=306.27 Aligned_cols=247 Identities=18% Similarity=0.304 Sum_probs=194.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
+.|.....||.|+||.||++.+..++..||||.+.... ....+..|+.+++.++|.+++..+. .+..++..+++|||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~-~~~~~~~~~lv~e~ 100 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYN-SYLVGDELWVVMEF 100 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHH-heecCCeEEEEEeC
Confidence 45666788999999999999998899999999875432 2345788999999998665555544 44567788999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 85 ~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+ +++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.++|+|||++........
T Consensus 101 ~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kL~dfg~~~~~~~~~~-- 173 (292)
T cd06658 101 LEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDGRIKLSDFGFCAQVSKEVP-- 173 (292)
T ss_pred CCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEccCcchhhcccccc--
Confidence 9 778988875 34689999999999999999999999999999999999994 678999999999876543221
Q ss_pred ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
......|+..|+|||++.+..++.++|||||||++|||++|..||..... ...+..+... ..... .....
T Consensus 174 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~-~~~~~-~~~~~ 243 (292)
T cd06658 174 -----KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP---LQAMRRIRDN-LPPRV-KDSHK 243 (292)
T ss_pred -----cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhc-CCCcc-ccccc
Confidence 12345789999999999988899999999999999999999999976432 2222222111 11111 11234
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
++..+.+++..||..||.+||+++++++
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 6789999999999999999999887754
No 321
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.5e-37 Score=298.82 Aligned_cols=240 Identities=16% Similarity=0.188 Sum_probs=181.4
Q ss_pred eeeeecCceEEEEEEEcC------------CCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 13 RKIGSGSFGEIYLGTNIQ------------TNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~------------~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
+.||+|+||.||+|+... ....|++|++..... ...+..|+.++..++|++ |..+..++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~-iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKH-IVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCC-EeeEEEEEecCCCC
Confidence 468999999999998532 233688998654322 235778888999998655 55555556666778
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCC----CCCeEEEEecCCc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR----RANQVYIIDFGLA 153 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~----~~~~vkL~DFGla 153 (474)
+++|||+ +++|..++......+++..++.|+.||+.||.|||++||+||||||+|||++.+. ....++|+|||++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999 6788888765566799999999999999999999999999999999999996321 1124899999998
Q ss_pred cccccCCCccccccccCCCCccCcccccccccc-CCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCcCcHHHHHHHHhhc
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHL-GIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTKKQKYEKISEK 231 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-~~~~s~ksDIwSlGvil~ell-tG~~Pf~~~~~~~~~~~~~~i~~~ 231 (474)
...... ....++..|+|||.+. +..++.++|||||||++|||+ .|..||......... .....
T Consensus 160 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~----~~~~~ 224 (262)
T cd05077 160 ITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE----RFYEG 224 (262)
T ss_pred ccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH----HHHhc
Confidence 754321 2346788999999887 466899999999999999998 589998764322111 11111
Q ss_pred cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 232 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
.. ......++++.+||.+||+.||++||++.+|++.|
T Consensus 225 ~~-----~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 QC-----MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred Cc-----cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11 11223467899999999999999999999987765
No 322
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=8.4e-37 Score=298.88 Aligned_cols=245 Identities=22% Similarity=0.341 Sum_probs=197.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+-|++.++||.|+||.||+|.+..+++.||||+...... ...+.+|+.++..+.|++ +..+..+...+...++|||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY-VTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCC-EeEEEEEEEeCCeEEEEEE
Confidence 347889999999999999999988999999998754332 245788999999998655 4455555667788899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++. ...+++..++.++.|++.||.|||++||+|+||||+||+++ .++.++|+|||++..+......
T Consensus 83 ~~~~~~l~~~i~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06641 83 YLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred eCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEEeecccceecccchhh
Confidence 99 778998886 35689999999999999999999999999999999999994 6788999999998765432211
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+.... .+.+..
T Consensus 158 -------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~----~~~~~~ 223 (277)
T cd06641 158 -------RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP---MKVLFLIPKNN----PPTLEG 223 (277)
T ss_pred -------hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch---HHHHHHHhcCC----CCCCCc
Confidence 1234688999999999988899999999999999999999999976443 22222222211 112335
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.++.++.+++..||..+|++||++.++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 67899999999999999999999988866
No 323
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3e-37 Score=298.34 Aligned_cols=242 Identities=25% Similarity=0.295 Sum_probs=197.6
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ....+..|+++++.++|+++ ..+..+...+...++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFL-VNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCCh-HHHHHhhcCCCeEEEEE
Confidence 5899999999999999999998899999999876432 23468889999999986554 44444556777899999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||+ +++|.+++... ..+++..++.|+.||+.||.|||++||+|+||||+||+++ .++.++|+|||++........
T Consensus 80 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 80 DLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred eCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCEEEeecccccccCCCcc
Confidence 999 88999998743 5799999999999999999999999999999999999994 778999999999986654321
Q ss_pred ccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHh
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 241 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (474)
.....|+..|+|||++.+..++.++|||||||++|+|++|..||................. ......
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~ 222 (258)
T cd05578 156 --------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-----ADVLYP 222 (258)
T ss_pred --------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-----ccccCc
Confidence 1234688999999999988899999999999999999999999987654322222222111 122234
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHH
Q 011945 242 RGYPTEFASYFHYCRSLRFDDKPDYA 267 (474)
Q Consensus 242 ~~~p~~l~~li~~cl~~dp~~RPt~~ 267 (474)
..+|.++.++|.+||..||++||++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~~~~ 248 (258)
T cd05578 223 ATWSTEAIDAINKLLERDPQKRLGDN 248 (258)
T ss_pred ccCcHHHHHHHHHHccCChhHcCCcc
Confidence 56789999999999999999999983
No 324
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=7.2e-37 Score=300.87 Aligned_cols=264 Identities=18% Similarity=0.276 Sum_probs=206.7
Q ss_pred cEEEeeeeeecCceEEEEEEEc---CCCeEEEEEEeccCC------CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~------~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
+|++.+.||+|+||.||++++. .+++.||||++.... ....+..|+.++..+.+++++..+......+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4899999999999999999864 467889999875321 2245788999999998778777777777778889
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
++||||+ +++|.+++.. ...+++..++.++.|++.||.|||+.|++||||||.||+++ .++.++|+|||++..+.
T Consensus 81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEEECccccccc
Confidence 9999999 7799988863 35689999999999999999999999999999999999994 67889999999987654
Q ss_pred cCCCccccccccCCCCccCccccccccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHH-HHHhhcccc
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY-EKISEKKVS 234 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~--~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~-~~i~~~~~~ 234 (474)
..... ......|+..|+|||.+.+.. .+.++||||||+++|||++|..||...........+ ..+....
T Consensus 157 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-- 228 (288)
T cd05583 157 AEEEE------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK-- 228 (288)
T ss_pred ccccc------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC--
Confidence 43221 112356899999999988765 788999999999999999999999643222111111 1111111
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccc
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTIL 293 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~ 293 (474)
......++.++.+++.+||+.||++||++.++.++|++.+ ....+|...
T Consensus 229 ---~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~-------~~~~~~~~~ 277 (288)
T cd05583 229 ---PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPF-------FQGIDWDDL 277 (288)
T ss_pred ---CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcc-------cccCCHHHH
Confidence 1123457889999999999999999999999988887764 334567654
No 325
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.8e-37 Score=306.67 Aligned_cols=252 Identities=20% Similarity=0.249 Sum_probs=198.5
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeC----CEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEG----DYNV 79 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~----~~~~ 79 (474)
+|++.++||.|+||.||+|++..+++.||||.+.... ..+.+..|+.+++.++|.+++..+..+.... ...|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 6999999999999999999998889999999876532 3456889999999998666555554443332 3679
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 80 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 80 lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
++|+|++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.++|+|||++......
T Consensus 81 lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~---~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN---SNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccCceEeeccc
Confidence 9999999899998873 44899999999999999999999999999999999999994 6789999999999876554
Q ss_pred CCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc------
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------ 232 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~------ 232 (474)
.... .......++..|+|||++.+. .++.++|||||||++|+|++|..||.+..... .+..+....
T Consensus 157 ~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~ 229 (330)
T cd07834 157 EDEK----GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID---QLNLIVEVLGTPSEE 229 (330)
T ss_pred cccc----ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHhcCCCChh
Confidence 3110 112345688999999999988 78999999999999999999999998754322 222221110
Q ss_pred --------------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 --------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 --------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.......+...++.++.++|..||+.+|++||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll 287 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEAL 287 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 01111223345788999999999999999999988765
No 326
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.1e-36 Score=298.20 Aligned_cols=254 Identities=20% Similarity=0.257 Sum_probs=196.4
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEe-CCEEEEEEe
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVE-GDYNVLVID 83 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~-~~~~~lv~e 83 (474)
|++.++||.|+||.||+|.+..+++.||+|.+.... ....+..|+.+++.+.|.+.+..+..+... ....+++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 789999999999999999999899999999887542 224578899999999966665555444433 378999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 84 ~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
|++++|.+++......+++..++.++.||+.||+|||+.|++|+||||+|||++ +++.+||+|||++.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~~~l~d~g~~~~~~~~~~~- 156 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGVLKLADFGLARPYTKRNSA- 156 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCCEEEccccceeeccCCCcc-
Confidence 998899999875556799999999999999999999999999999999999994 7889999999999876554321
Q ss_pred ccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc-----------
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----------- 231 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~----------- 231 (474)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||...........+......
T Consensus 157 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 157 -----DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred -----cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccccc
Confidence 11223568899999988764 5799999999999999999999999765432211111111000
Q ss_pred -----------cccchHHHHhcC-CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 232 -----------KVSTSIEALCRG-YPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 232 -----------~~~~~~~~l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
............ ++.++.+++..||..+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000111122223 4889999999999999999999887754
No 327
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.3e-37 Score=299.87 Aligned_cols=239 Identities=17% Similarity=0.227 Sum_probs=182.2
Q ss_pred eeeecCceEEEEEEEcCC------------------------CeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCce
Q 011945 14 KIGSGSFGEIYLGTNIQT------------------------NEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPN 67 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~------------------------~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~ 67 (474)
+||+|+||.||+|....+ ...|++|++..... ...+..|+.+++.++| ++|..
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h-~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSH-IHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCC-CCeee
Confidence 699999999999975321 23588888754322 2346778888888886 55556
Q ss_pred eEEEeEeCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeC----CCC
Q 011945 68 LRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG----RRA 142 (474)
Q Consensus 68 l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~----~~~ 142 (474)
+..++......++||||+ +++|..++......+++..++.++.||+.||+|||++||+||||||+|||++.. ...
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~ 160 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS 160 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence 666677788889999999 788988887656779999999999999999999999999999999999999632 123
Q ss_pred CeEEEEecCCccccccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHH-hCCCCCCCCCcCc
Q 011945 143 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGT 220 (474)
Q Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~ell-tG~~Pf~~~~~~~ 220 (474)
..+||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..||.......
T Consensus 161 ~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 161 PFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 35899999998644321 12357888999998876 56899999999999999985 6999998754322
Q ss_pred HHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 221 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
....+ ..... +....++++.++|.+||+.+|++||++.+|++.|
T Consensus 230 ~~~~~----~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 KERFY----EKKHR-----LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHH----HhccC-----CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 21111 11111 1223457899999999999999999999987765
No 328
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2e-36 Score=296.73 Aligned_cols=239 Identities=22% Similarity=0.262 Sum_probs=185.8
Q ss_pred eeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhc--CCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~--~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
.||+|+||.||+|.+..+++.||||++..... ......|..+++.+. +++++..+.++....+..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 48999999999999989999999998754321 112344555554443 3566666777777778899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
|++|.+++.. ...+++..++.|+.|++.||.|||+++|+||||||+|||++ .++.+||+|||++..+.....
T Consensus 81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg~~~~~~~~~~---- 152 (278)
T cd05606 81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKP---- 152 (278)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCcCccccCccCC----
Confidence 8899988863 45799999999999999999999999999999999999994 678899999999976543221
Q ss_pred ccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCC
Q 011945 166 PYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 244 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 244 (474)
....|+..|+|||++.+. .++.++|||||||++|||++|..||.+............+... ...+...+
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 222 (278)
T cd05606 153 -----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-----AVELPDSF 222 (278)
T ss_pred -----cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc-----CCCCCCcC
Confidence 234789999999999754 6899999999999999999999999875433222222111111 11233456
Q ss_pred cHHHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011945 245 PTEFASYFHYCRSLRFDDKP-----DYAYLK 270 (474)
Q Consensus 245 p~~l~~li~~cl~~dp~~RP-----t~~~l~ 270 (474)
+.++.+++.+||..+|.+|| ++.+++
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 253 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 253 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHH
Confidence 89999999999999999999 776664
No 329
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.4e-36 Score=306.96 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=194.3
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEe-----
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 74 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~----- 74 (474)
.+.++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.|.+++..+..+...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCC
Confidence 45689999999999999999999998999999999876432 224578899999999877766665554332
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
....+++++++..+|..++ ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 92 ~~~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~---~~~~~kL~dfg~~~ 165 (342)
T cd07879 92 FQDFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDFGLAR 165 (342)
T ss_pred CceEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCCCCc
Confidence 2346899999988887765 34689999999999999999999999999999999999994 77899999999997
Q ss_pred ccccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc--
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-- 231 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-- 231 (474)
...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+..+...
T Consensus 166 ~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 166 HADAEM----------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred CCCCCC----------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 543211 23467899999999876 45899999999999999999999999864321111111110000
Q ss_pred ---------------------cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 232 ---------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 232 ---------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
........+...++.++.++|..||+.||++||++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0011112223456788999999999999999999888753
No 330
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=6.9e-37 Score=299.18 Aligned_cols=249 Identities=22% Similarity=0.242 Sum_probs=198.1
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
|++.+.||.|++|.||+|.+..+++.|++|.+..... ...+..|+.+++.++|. ++..+..+...+...++++||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHP-NIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCC-CcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999988999999998765432 24678899999999855 455555455566888999999
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 85 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 85 ~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+.++|.+++......+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||.+........
T Consensus 80 ~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df~~~~~~~~~~~--- 153 (283)
T cd05118 80 MDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLADFGLARSFGSPVR--- 153 (283)
T ss_pred cCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEeeeeeeEecCCCcc---
Confidence 98899999886667899999999999999999999999999999999999994 678999999999987654331
Q ss_pred cccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc-----------
Q 011945 165 IPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK----------- 232 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~----------- 232 (474)
......++..|+|||.+.+. .++.++|||||||++|+|++|+.||......+ .+..+....
T Consensus 154 ----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd05118 154 ----PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID---QLFKIFRTLGTPDPEVWPKF 226 (283)
T ss_pred ----cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCchHhcccc
Confidence 11234678899999999877 68999999999999999999999997643321 121111100
Q ss_pred --------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 --------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 --------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.......+...++.++.++|..||..||.+||++.+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 011112333457889999999999999999999887753
No 331
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-38 Score=295.60 Aligned_cols=255 Identities=21% Similarity=0.261 Sum_probs=209.8
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCCH
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSL 89 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL 89 (474)
+.||+|+|+.|--|....++.+||||++.+... ...+.+|++++..+++|.+|..+..|+.++..+|||||-+ ||.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 578999999999999999999999999877654 3568999999999999999999988899999999999999 8899
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccccccc
Q 011945 90 EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 169 (474)
Q Consensus 90 ~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 169 (474)
...|.. ...|++.++..+..+|+.||.|||.+||.||||||+|||....+.-.-||||||.|.........-......+
T Consensus 164 LshI~~-~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~ 242 (463)
T KOG0607|consen 164 LSHIQK-RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPE 242 (463)
T ss_pred HHHHHH-hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCcc
Confidence 888873 4579999999999999999999999999999999999999644444568999999886544332222222223
Q ss_pred CCCCccCcccccccccc---C--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCc------------HHHHHHHHhhcc
Q 011945 170 NKNLTGTARYASMNTHL---G--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------------KKQKYEKISEKK 232 (474)
Q Consensus 170 ~~~~~GT~~Y~APE~~~---~--~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~------------~~~~~~~i~~~~ 232 (474)
..+.+|+..|||||+.. + ..|+.+.|+||||||||-||.|.+||.+....+ ....++.|++.+
T Consensus 243 L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGk 322 (463)
T KOG0607|consen 243 LLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 322 (463)
T ss_pred ccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccC
Confidence 45568999999999764 3 248999999999999999999999998754322 345567777777
Q ss_pred ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011945 233 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 269 (474)
Q Consensus 233 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 269 (474)
...+- +-+..++.+.++++..+|..|+.+|-++..+
T Consensus 323 YeFPd-kdWahIS~eakdlisnLlvrda~~rlsa~~v 358 (463)
T KOG0607|consen 323 YEFPD-KDWAHISSEAKDLISNLLVRDAKQRLSAAQV 358 (463)
T ss_pred CcCCh-hhhHHhhHHHHHHHHHHHhccHHhhhhhhhc
Confidence 75543 3456789999999999999999999886655
No 332
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.2e-37 Score=304.71 Aligned_cols=247 Identities=17% Similarity=0.288 Sum_probs=196.3
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
..|....+||.|+||.||+|.+..+++.||||++.... ....+.+|+.++..+.|++++. +..++..+...+++|||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~-~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVE-MYKSYLVGEELWVLMEF 99 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhh-hhhheeeCCeEEEEEec
Confidence 34666778999999999999998899999999875432 3346888999999998655444 44455667788999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 85 ~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+ +++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+.....
T Consensus 100 ~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~kL~dfg~~~~~~~~~~-- 172 (297)
T cd06659 100 LQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDVP-- 172 (297)
T ss_pred CCCCCHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEEEeechhHhhcccccc--
Confidence 8 788988876 35689999999999999999999999999999999999994 778999999999976543221
Q ss_pred ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+...... .......
T Consensus 173 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~--~~~~~~~ 242 (297)
T cd06659 173 -----KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP---VQAMKRLRDSPPP--KLKNAHK 242 (297)
T ss_pred -----cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhccCCC--CccccCC
Confidence 11345789999999999998999999999999999999999999976432 2333333221111 1112346
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
++.++.++|..||..+|++||++.+|++
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 7889999999999999999999887755
No 333
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.9e-36 Score=302.74 Aligned_cols=246 Identities=23% Similarity=0.320 Sum_probs=196.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
...|.+.+.||+|+||.||+|.+..++..||||++..... ...+..|+++++.++|++ +..+..+...+...++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~~~~l 102 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN-SIEYKGCYLREHTAWL 102 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCC-EEEEEEEEeeCCeEEE
Confidence 3458899999999999999999988999999998764321 235788999999998654 4455556667778899
Q ss_pred EEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 81 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 81 v~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
+|||+.++|.+++......+++..+..++.||+.||.|||++||+||||+|+||++ +.++.++|+|||++......
T Consensus 103 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 103 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred EEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccccCCc-
Confidence 99999889999887666779999999999999999999999999999999999999 46789999999998754322
Q ss_pred CccccccccCCCCccCcccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
....|+..|+|||++. +..++.++|||||||++|||++|..||..... ...+..+.......
T Consensus 179 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~-- 243 (317)
T cd06635 179 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNESPT-- 243 (317)
T ss_pred ----------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHhccCCC--
Confidence 2346889999999974 45688999999999999999999999976432 22222222211111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRL 272 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~ 272 (474)
.....+++.+.+++.+||..+|++||++.++++.
T Consensus 244 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 244 -LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred -CCCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 1123567899999999999999999998887543
No 334
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2e-36 Score=296.19 Aligned_cols=238 Identities=21% Similarity=0.246 Sum_probs=186.9
Q ss_pred eeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
||+|+||+||+|.+..+++.||+|++.... ....+..|+++++.++| +++..+..........|++|||+ +++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS-RFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC-CCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999999999999999875432 22346789999999985 45555555556667889999998 789
Q ss_pred HHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccccc
Q 011945 89 LEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 167 (474)
Q Consensus 89 L~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (474)
|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||++ +.++.++|+|||++........
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~------ 150 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKK------ 150 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCc------
Confidence 999887433 369999999999999999999999999999999999999 4678999999999876543211
Q ss_pred ccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHH
Q 011945 168 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 247 (474)
Q Consensus 168 ~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 247 (474)
.....++..|+|||++.+..++.++|||||||++|+|++|+.||...........+.. ... .....+...++++
T Consensus 151 --~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~ 224 (277)
T cd05577 151 --IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR---RTL-EMAVEYPDKFSPE 224 (277)
T ss_pred --cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh---ccc-cccccCCccCCHH
Confidence 1234678899999999988899999999999999999999999976543222222211 111 1111233567899
Q ss_pred HHHHHHHHhcCCCCCCCCHHH
Q 011945 248 FASYFHYCRSLRFDDKPDYAY 268 (474)
Q Consensus 248 l~~li~~cl~~dp~~RPt~~~ 268 (474)
+.++|.+||..+|++||++.+
T Consensus 225 ~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHHccCChhHccCCCc
Confidence 999999999999999994433
No 335
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2e-36 Score=289.38 Aligned_cols=247 Identities=25% Similarity=0.407 Sum_probs=200.0
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
+|.+.+.||+|++|.||++.+..+++.|++|++.... ....+.+|+.+++.+.+ +++..+..+.......++++|++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH-PNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC-CCEeEEEEEEecCCeEEEEEecC
Confidence 4889999999999999999998899999999987654 44678999999999994 45555655666678889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 -g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++......+++..++.++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||++........
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeecccccccccccc---
Confidence 5999999986556799999999999999999999999999999999999994 678999999999987654321
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCC
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 244 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 244 (474)
.....++..|++||.+.+..++.++||||||+++|+|++|..||...... ............... ....+
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~--~~~~~ 223 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM---KALFKIATNGPPGLR--NPEKW 223 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHHhcCCCCcC--ccccc
Confidence 13457889999999999888999999999999999999999999764322 222222111111100 01224
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 245 PTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 245 p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
+.++.+++..||..||++||++.++++
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 224 SDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 789999999999999999999888754
No 336
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1e-36 Score=296.40 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=197.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcC-CCeEEEEEEeccCC------------CchHHHHHHHHHHHhcCCCCCceeEEEeEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKT------------KHPQLQYEAKLYKILQGGTGIPNLRWFGVE 74 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~~vAvK~~~~~~------------~~~~l~~E~~il~~l~~~~~i~~l~~~~~~ 74 (474)
.|++.+.||+|+||.||+|.+.. .++.||||.+.... ....+..|+.++.....++++..+..+...
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999877 67899999764321 112366788877764445666666666677
Q ss_pred CCEEEEEEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEe
Q 011945 75 GDYNVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIID 149 (474)
Q Consensus 75 ~~~~~lv~e~~-g~sL~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~D 149 (474)
+...+++|||+ +++|.+++.. ....+++..++.++.|++.||.|||+ .||+|+||||+|||++ ..+.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~---~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC---CCCcEEEec
Confidence 88899999998 7899998753 34568999999999999999999996 7899999999999994 778999999
Q ss_pred cCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHh
Q 011945 150 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 229 (474)
Q Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~ 229 (474)
||++........ .....|+..|++||++.+..++.++|||||||++|+|++|..||..... ......+.
T Consensus 158 fg~~~~~~~~~~--------~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~---~~~~~~~~ 226 (269)
T cd08528 158 FGLAKQKQPESK--------LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM---LSLATKIV 226 (269)
T ss_pred ccceeecccccc--------cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH---HHHHHHHh
Confidence 999986544321 1345789999999999998899999999999999999999999975432 22223332
Q ss_pred hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011945 230 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 274 (474)
Q Consensus 230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 274 (474)
....... ....+++++.+++.+||..||++||++.++.+.+.
T Consensus 227 ~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 227 EAVYEPL---PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hccCCcC---CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 2222111 11357899999999999999999999999988764
No 337
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.2e-36 Score=296.51 Aligned_cols=253 Identities=18% Similarity=0.293 Sum_probs=192.8
Q ss_pred EEEeeeeeecCceEEEEEEEcC---CCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeC-----C
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQ---TNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG-----D 76 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~-----~ 76 (474)
|++.+.||+|+||.||+|.+.. +++.||||++..+.. .+.+.+|+++++.+.|++++..+..+.... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 6788999999999999998643 578999998765432 235788999999998766555554332221 1
Q ss_pred EEEEEEecC-CCCHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEec
Q 011945 77 YNVLVIDLL-GPSLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~-----~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DF 150 (474)
..+++++|+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+||+++ .++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~---~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc---CCCCEEECcc
Confidence 346777777 78998876422 12478999999999999999999999999999999999994 6788999999
Q ss_pred CCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHh
Q 011945 151 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKIS 229 (474)
Q Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~ 229 (474)
|+++....... +.......++..|++||.+.+..++.++|||||||++|||++ |+.||.+... ...+..+.
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~~~ 229 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNYLI 229 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHHHH
Confidence 99986543221 111123356678999999998889999999999999999999 8999976533 22222222
Q ss_pred hccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 230 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
..... .....++..+.+++..||+.+|++||++.++++.|+.+
T Consensus 230 ~~~~~----~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 KGNRL----KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 21110 11245788999999999999999999999999998865
No 338
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=8.3e-37 Score=308.80 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=196.6
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeC-----
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEG----- 75 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~----- 75 (474)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.|++++..+..+....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 6789999999999999999999999999999999875432 2245678999999998777666554443322
Q ss_pred CEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 76 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 76 ~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
...++|+|+++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++..
T Consensus 93 ~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~---~~~~~kL~dfg~~~~ 167 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVK--CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFGLARH 167 (343)
T ss_pred ccEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEcccccccc
Confidence 3489999999999999987 35799999999999999999999999999999999999994 678899999999986
Q ss_pred cccCCCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc--
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-- 232 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-- 232 (474)
.... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||.+... ...+..+....
T Consensus 168 ~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~---~~~~~~i~~~~~~ 234 (343)
T cd07851 168 TDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH---IDQLKRIMNLVGT 234 (343)
T ss_pred cccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCC
Confidence 5432 1234678899999998763 678999999999999999999999976433 22222221110
Q ss_pred ------------------------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 233 ------------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 233 ------------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.......+...+++++.++|..||..+|++||++.+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell 296 (343)
T cd07851 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEAL 296 (343)
T ss_pred CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHh
Confidence 00111223345688999999999999999999988764
No 339
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-38 Score=322.67 Aligned_cols=272 Identities=22% Similarity=0.294 Sum_probs=207.2
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC---CCchHHHHHHHHHHHhcCCCCCceeEEEeE-----eCC
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK---TKHPQLQYEAKLYKILQGGTGIPNLRWFGV-----EGD 76 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~---~~~~~l~~E~~il~~l~~~~~i~~l~~~~~-----~~~ 76 (474)
....|...+.||+|+||.||+++++.+|+.||||.++.. ...+...+|+++|++|+|.|+|..+..-.. ...
T Consensus 11 ~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 11 ENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred CCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 455688889999999999999999999999999988763 345668999999999996555555432221 134
Q ss_pred EEEEEEecC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCC-CCCeEEEEecCC
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR-RANQVYIIDFGL 152 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~--~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~-~~~~vkL~DFGl 152 (474)
..+++|||| ||+|..+++... ..+++.+++.++.+++.||.|||++|||||||||.||++-.+. .....||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 568999999 999999997443 3499999999999999999999999999999999999996544 233569999999
Q ss_pred ccccccCCCccccccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC-cHHHHHHHHhh
Q 011945 153 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-TKKQKYEKISE 230 (474)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~i~~ 230 (474)
|+.+.+... ...++||..|.+||++.. ..|+..+|.|||||++|+++||.+||...... ...+....+..
T Consensus 171 Arel~d~s~--------~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~t 242 (732)
T KOG4250|consen 171 ARELDDNSL--------FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIIT 242 (732)
T ss_pred cccCCCCCe--------eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhc
Confidence 999887653 356799999999999995 78999999999999999999999999654322 11222222222
Q ss_pred ccccch--------------------HHHHhcCCcHHHHHHHHHHhcCCCCCCC--CHHHHHHHHHHHHHHcCCCC
Q 011945 231 KKVSTS--------------------IEALCRGYPTEFASYFHYCRSLRFDDKP--DYAYLKRLFRDLFIREGFQF 284 (474)
Q Consensus 231 ~~~~~~--------------------~~~l~~~~p~~l~~li~~cl~~dp~~RP--t~~~l~~~L~~l~~~~~~~~ 284 (474)
++.... ...+...+-..+...+..+|..+|.+|- .+.+....+.+++...-...
T Consensus 243 kkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vvhi 318 (732)
T KOG4250|consen 243 KKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVVHI 318 (732)
T ss_pred cCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhheeEE
Confidence 221110 0011122234567778888899999998 77788888888887665433
No 340
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.5e-36 Score=291.66 Aligned_cols=246 Identities=23% Similarity=0.302 Sum_probs=201.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|.+.+.||.|+||.||++.+..+++.|++|++.... ....+..|+++++.++|++.+..+. ....+...++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~-~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYE-SFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEE-EEecCCEEEEEEE
Confidence 5899999999999999999998899999999886543 2345888999999999665555444 4455588899999
Q ss_pred cC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 84 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 84 ~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
++ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||+|+||+++ ..+.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEEECCccceeecccC
Confidence 98 67999999754 36799999999999999999999999999999999999994 6789999999999876543
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.. ......|++.|+|||.+.+..++.++||||||+++|+|++|..||.... .......+.... ...
T Consensus 157 ~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---~~~~~~~~~~~~----~~~ 222 (258)
T cd08215 157 VD-------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN---LLELALKILKGQ----YPP 222 (258)
T ss_pred cc-------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc---HHHHHHHHhcCC----CCC
Confidence 31 1233578999999999999889999999999999999999999997643 233333332222 222
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
+...++.++.+++..||..+|++||++.++++
T Consensus 223 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 223 IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 34578899999999999999999999888754
No 341
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.3e-36 Score=299.69 Aligned_cols=244 Identities=24% Similarity=0.333 Sum_probs=195.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.+.|...++||+|+||+||+|++..+++.|+||++..... ...+..|+.+++.++|.+ +..+..++......++
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~l 98 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPN-TIEYKGCYLKEHTAWL 98 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCC-CccEEEEEEeCCEEEE
Confidence 3457778899999999999999999999999998764322 135778999999998554 5555556677788999
Q ss_pred EEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 81 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 81 v~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
+|||+.++|.+++......+++.+++.++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++.....
T Consensus 99 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 99 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCEEEeecCCCcccCC--
Confidence 999999999999876667799999999999999999999999999999999999994 678899999999864321
Q ss_pred CccccccccCCCCccCcccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
.....|+..|+|||++. +..++.++|||||||++|+|++|..||...... .....+.......
T Consensus 174 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~---~~~~~~~~~~~~~-- 239 (313)
T cd06633 174 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHIAQNDSPT-- 239 (313)
T ss_pred ---------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhcCCCC--
Confidence 13457899999999985 356889999999999999999999999775432 2222222211111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.....++..+.+++.+||+.+|++||++.+++
T Consensus 240 -~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l 271 (313)
T cd06633 240 -LQSNEWTDSFRGFVDYCLQKIPQERPASAELL 271 (313)
T ss_pred -CCccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 11245678899999999999999999988775
No 342
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.7e-36 Score=295.41 Aligned_cols=243 Identities=17% Similarity=0.280 Sum_probs=193.3
Q ss_pred cEEEeeeeeecCceEEEEEEEc---CCCeEEEEEEeccCC------CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 78 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~------~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~ 78 (474)
+|++.+.||.|+||.||+|.+. .+|+.||+|++.... ....+..|+.+++.+.++++|..+..+...+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4899999999999999999874 478999999876422 2345788999999998888888888777788889
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 79 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
+++|||+ +++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCEEEeeCccceecc
Confidence 9999999 7899998874 45689999999999999999999999999999999999994 67899999999998654
Q ss_pred cCCCccccccccCCCCccCccccccccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH-HHHHHHHhhcccc
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVS 234 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~--~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~ 234 (474)
..... ......|+..|+|||.+.+. .++.++|||||||++|+|++|..||........ ......+....
T Consensus 157 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-- 228 (290)
T cd05613 157 EDEVE------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-- 228 (290)
T ss_pred ccccc------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC--
Confidence 43211 11235689999999998763 467899999999999999999999975332211 11122111111
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCC
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPD 265 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt 265 (474)
......+++.+.+++.+||..||++||+
T Consensus 229 ---~~~~~~~~~~~~~ll~~~l~~~p~~R~~ 256 (290)
T cd05613 229 ---PPYPQEMSALAKDIIQRLLMKDPKKRLG 256 (290)
T ss_pred ---CCCCccCCHHHHHHHHHHhcCCHHHhcC
Confidence 1123457889999999999999999983
No 343
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.6e-36 Score=299.90 Aligned_cols=247 Identities=22% Similarity=0.322 Sum_probs=196.1
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.++|++.+.||+|+||.||++.+..++..||+|.+.... ....+..|+.+++.+.|+ ++..+..+....+..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp-~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHP-NIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCC-CeeehhheeeeCCcEEEEEe
Confidence 468999999999999999999998899999999875432 234578899999999854 45555555666778899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++. ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||++..+......
T Consensus 97 ~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL~dfg~~~~~~~~~~~ 171 (293)
T cd06647 97 YLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQSK 171 (293)
T ss_pred cCCCCcHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEEccCcceecccccccc
Confidence 99 889999986 34689999999999999999999999999999999999994 6788999999998765443221
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.....|+..|++||.+.+..++.++|||||||++|++++|..||....... .+..+..... . ......
T Consensus 172 -------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~---~~~~~~~~~~-~-~~~~~~ 239 (293)
T cd06647 172 -------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYLIATNGT-P-ELQNPE 239 (293)
T ss_pred -------cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh---heeehhcCCC-C-CCCCcc
Confidence 123478899999999998889999999999999999999999997643211 1111111100 0 011123
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.++..+.+++..||..+|++||++.+++
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il 267 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELL 267 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 4678899999999999999999987764
No 344
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5.8e-36 Score=289.65 Aligned_cols=251 Identities=24% Similarity=0.415 Sum_probs=197.7
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++.+.||+|+||.||+|.+..+++.|+||++..... ...+..|+.+++.++|.+ |..+..+.......++++|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~-i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPN-LVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCC-hhheeeeEecCCEEEEEEe
Confidence 69999999999999999999988999999998765533 345889999999998654 4455555667788899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++.. ...+++..++.|+.|++.||.|||+.||+|+||||+||+++ ..+.+||+|||++.........
T Consensus 80 ~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 80 YCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred cCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEcccccccccCCCCCc
Confidence 98 7899999874 34589999999999999999999999999999999999994 6789999999999876554321
Q ss_pred cccccccCCCCccCccccccccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIE---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~---~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
... ......++..|+|||++.+.. .+.++|||||||++|+|++|..||..... .......+.... ....+.
T Consensus 156 ~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~-~~~~~~ 229 (264)
T cd06626 156 MGE---EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN--EFQIMFHVGAGH-KPPIPD 229 (264)
T ss_pred ccc---cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc--hHHHHHHHhcCC-CCCCCc
Confidence 100 012356889999999998766 88999999999999999999999976532 111122222111 111111
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
...++..+.+++..||..+|++||++.+++
T Consensus 230 -~~~~~~~~~~li~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 230 -SLQLSPEGKDFLDRCLESDPKKRPTASELL 259 (264)
T ss_pred -ccccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 123588999999999999999999988774
No 345
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-38 Score=294.19 Aligned_cols=260 Identities=16% Similarity=0.190 Sum_probs=207.6
Q ss_pred ccCCcEEEe-eeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEe----EeCCEE
Q 011945 4 RVGNKFRLG-RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFG----VEGDYN 78 (474)
Q Consensus 4 ~i~~~y~i~-~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~----~~~~~~ 78 (474)
.|.++|.|- ++||-|-.|.|-.|.++.+++.+|+|++. +.+...+|+++.-....|++|+.+..+. ......
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~---Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL---DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHh---cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 356778776 57899999999999999999999999875 4456788999988888777777664332 245677
Q ss_pred EEEEecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 79 VLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 79 ~lv~e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
.+|||++ ||.|.+.|... ...|++.++..|+.||..|+.|||+.+|.||||||+|+|.+....+-.+||+|||+|+.-
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccccc
Confidence 8999999 99999998754 446999999999999999999999999999999999999987777788999999999875
Q ss_pred ccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH-HHHHHHHhhccccc
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVST 235 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~ 235 (474)
..... ..+-+-|+.|.|||++....|+...|+||+||+||-||+|.+||........ ...-.+|.......
T Consensus 215 ~~~~~--------L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~F 286 (400)
T KOG0604|consen 215 QEPGD--------LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEF 286 (400)
T ss_pred CCCcc--------ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccC
Confidence 54322 2345789999999999999999999999999999999999999986543221 11223343333333
Q ss_pred hHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011945 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 278 (474)
+-+ -+..+++..+++|+.+|..+|.+|.|+.++ +++.+.
T Consensus 287 P~p-EWs~VSe~aKdlIR~LLkt~PteRlTI~~~---m~hpwi 325 (400)
T KOG0604|consen 287 PEP-EWSCVSEAAKDLIRKLLKTEPTERLTIEEV---MDHPWI 325 (400)
T ss_pred CCh-hHhHHHHHHHHHHHHHhcCCchhheeHHHh---hcCchh
Confidence 322 346678999999999999999999996655 555443
No 346
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.2e-36 Score=294.98 Aligned_cols=248 Identities=25% Similarity=0.399 Sum_probs=200.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++|.+.+.||.|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+..+++|..+..+...+...+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 57999999999999999999999999999999876522 2345788999999998456666666566677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||++ +++|.+++.. ...+++..++.|+.||+.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRK-YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEecCCccccccCCcc
Confidence 9999 9999999974 34799999999999999999999999999999999999994 67889999999998765433
Q ss_pred Ccccc-------------ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHH
Q 011945 161 THQHI-------------PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK 227 (474)
Q Consensus 161 ~~~~~-------------~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 227 (474)
..... .........++..|+|||++.+..++.++|||||||++|++++|..||.... ..+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~~~~~ 233 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN---EYLTFQK 233 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHH
Confidence 21100 0122344578899999999998889999999999999999999999998643 2233333
Q ss_pred HhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCH
Q 011945 228 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 266 (474)
Q Consensus 228 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 266 (474)
+..... .+...+++.+.+++..||..+|++||++
T Consensus 234 ~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 234 ILKLEY-----SFPPNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred HHhcCC-----CCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence 322111 1235678999999999999999999998
No 347
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=347.53 Aligned_cols=257 Identities=22% Similarity=0.346 Sum_probs=207.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
.-+|.-..+||.|.||.||.|.+..+|+..|+|-++.. ...+.+..|..++..|+|+ +++.++++.++.+..+|.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHp-NlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHP-NLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCc-cccccCceeecHHHHHHH
Confidence 44677888999999999999999999999999965432 2345688999999999955 555666677888889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||| ||+|.+++. ..+..++.....+..|++.||.|||++|||||||||+||++ +.++.+|++|||.|..+....
T Consensus 1313 MEyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecCch
Confidence 9999 999999998 45668888888999999999999999999999999999999 478899999999999887653
Q ss_pred CccccccccCCCCccCccccccccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIE---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~---~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
+.+| .+.....||+.|||||++.|.. ...++||||||||+.||+||+.||..++.. .+.+.++.....
T Consensus 1389 --~~~~-~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne--~aIMy~V~~gh~---- 1459 (1509)
T KOG4645|consen 1389 --QTMP-GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE--WAIMYHVAAGHK---- 1459 (1509)
T ss_pred --hcCC-HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch--hHHHhHHhccCC----
Confidence 1222 3456779999999999998743 567999999999999999999999887542 333333333222
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
+.++..++.+-.+||..||..||+.|.++.+ +|+..|-+
T Consensus 1460 Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~q---lle~~f~~ 1498 (1509)
T KOG4645|consen 1460 PQIPERLSSEGRDFLEHCLEQDPKMRWTASQ---LLEHAFGK 1498 (1509)
T ss_pred CCCchhhhHhHHHHHHHHHhcCchhhhHHHH---HHHhhccc
Confidence 2334457899999999999999999977654 45565543
No 348
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-38 Score=312.98 Aligned_cols=241 Identities=20% Similarity=0.318 Sum_probs=203.4
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecCCCC
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPS 88 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~g~s 88 (474)
+.||+|.||+||-|+++++|+.||||++.+. ....++..|+.||+.+. |++|+.+...++..+..++|||-+.|+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~-HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH-HPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC-CCCeeEEEEeecCCceEEEEehhhcch
Confidence 7899999999999999999999999987653 23467999999999997 788899999999999999999999776
Q ss_pred HHHHH-HHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccccc
Q 011945 89 LEDLF-NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 167 (474)
Q Consensus 89 L~~li-~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (474)
..++| ....+++++.....++.||+.||.|||-++|+|+||||+|||+...+.-.++||||||+|+.+.+...
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF------ 722 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF------ 722 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh------
Confidence 66655 45577899999999999999999999999999999999999998766778999999999998876543
Q ss_pred ccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHH
Q 011945 168 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 247 (474)
Q Consensus 168 ~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 247 (474)
...++||+.|+|||++.++.|++.-|+||.|||+|--|.|.+||... ++...+++.....-... -+..++++
T Consensus 723 --RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~----PW~eis~~ 794 (888)
T KOG4236|consen 723 --RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPN----PWSEISPE 794 (888)
T ss_pred --hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCC----chhhcCHH
Confidence 24679999999999999999999999999999999999999999764 33344443332222222 23567899
Q ss_pred HHHHHHHHhcCCCCCCCCHHH
Q 011945 248 FASYFHYCRSLRFDDKPDYAY 268 (474)
Q Consensus 248 l~~li~~cl~~dp~~RPt~~~ 268 (474)
..+||..+|+..-.+|-+.+.
T Consensus 795 AidlIn~LLqVkm~kRysvdk 815 (888)
T KOG4236|consen 795 AIDLINNLLQVKMRKRYSVDK 815 (888)
T ss_pred HHHHHHHHHHHHHHHhcchHh
Confidence 999999999999999987543
No 349
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.7e-36 Score=296.46 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=201.5
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
..+.|++.+.||+|+||.||+|.+..++..|++|++..... ...+..|+++++.++|. ++..+..++......++++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHP-NIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCC-CeeEEEEEEEECCEEEEEEe
Confidence 45679999999999999999999988899999998875443 45688999999999865 55555556667788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+ +++|.+++......+++..++.++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||++........
T Consensus 96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~- 171 (286)
T cd06614 96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGSVKLADFGFAAQLTKEKS- 171 (286)
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCCEEECccchhhhhccchh-
Confidence 99 5999999986544799999999999999999999999999999999999994 678899999999876543221
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
......++..|++||++.+..++.++|||||||++|+|++|..||...... .....+....... .. ...
T Consensus 172 ------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~-~~-~~~ 240 (286)
T cd06614 172 ------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL---RALFLITTKGIPP-LK-NPE 240 (286)
T ss_pred ------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcCCCC-Cc-chh
Confidence 112346788999999999888999999999999999999999999764332 2222222221111 11 123
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.++.++.++|..||+.+|.+||++.+++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~~il 268 (286)
T cd06614 241 KWSPEFKDFLNKCLVKDPEKRPSAEELL 268 (286)
T ss_pred hCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 4789999999999999999999988774
No 350
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-38 Score=303.88 Aligned_cols=261 Identities=19% Similarity=0.266 Sum_probs=205.8
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-CCchHHHHHHHHHHHhcCC-----CCCceeEEEeEeCCE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLQYEAKLYKILQGG-----TGIPNLRWFGVEGDY 77 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~l~~E~~il~~l~~~-----~~i~~l~~~~~~~~~ 77 (474)
.+.++|.++.+||+|.||.|-.+.+..++..||||+++.- ...+...-|+++++++.+. +-+..+..++.....
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 4678999999999999999999999999999999987643 4456678899999999533 234444555667778
Q ss_pred EEEEEecCCCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeC---------C-------
Q 011945 78 NVLVIDLLGPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG---------R------- 140 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~---------~------- 140 (474)
.|||+|.+|.|+.+++... -.+|+...+..|+.|++.+++|||+.+++|-||||+|||+... .
T Consensus 166 iCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 166 ICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred eEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceecc
Confidence 8999999999999999753 3469999999999999999999999999999999999999531 1
Q ss_pred -CCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC
Q 011945 141 -RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 219 (474)
Q Consensus 141 -~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~ 219 (474)
++..|+|+|||.|+...+.. ...+.|..|.|||+++|..|+.++||||+||||+|+++|...|+.-.+.
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~h----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHH----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred CCCcceEEEecCCcceeccCc----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 13468999999998644322 3568899999999999999999999999999999999999999986655
Q ss_pred cHHHHHHHHhhccccchHHHH----------------------------hc-------C---CcHHHHHHHHHHhcCCCC
Q 011945 220 TKKQKYEKISEKKVSTSIEAL----------------------------CR-------G---YPTEFASYFHYCRSLRFD 261 (474)
Q Consensus 220 ~~~~~~~~i~~~~~~~~~~~l----------------------------~~-------~---~p~~l~~li~~cl~~dp~ 261 (474)
+...+++.|........+..- |. . --.+|.+||+.||.+||.
T Consensus 316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 316 EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 555555555442211111111 00 0 013589999999999999
Q ss_pred CCCCHHHHHHHHHHHH
Q 011945 262 DKPDYAYLKRLFRDLF 277 (474)
Q Consensus 262 ~RPt~~~l~~~L~~l~ 277 (474)
+|+|+.|+ |.+.|
T Consensus 396 ~RiTl~EA---L~HpF 408 (415)
T KOG0671|consen 396 RRITLREA---LSHPF 408 (415)
T ss_pred ccccHHHH---hcCHH
Confidence 99996665 44444
No 351
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.8e-36 Score=286.43 Aligned_cols=249 Identities=24% Similarity=0.356 Sum_probs=201.6
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeC--CEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG--DYNVLV 81 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~--~~~~lv 81 (474)
+|.+.+.||+|++|.||+|.+..+++.|++|++..... ...+.+|+.+++.+.|++++..+ .+.... ...+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY-GSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEE-EEEecCCCCeEEEE
Confidence 58899999999999999999988999999998866543 45688999999999965555544 444455 788999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
+|++ +++|.+++.... .+++..++.++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||.+.......
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccEEeccccc
Confidence 9999 899999997543 899999999999999999999999999999999999995 67899999999998776543
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 240 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (474)
.. .......++..|++||.+.+...+.++||||||+++|+|++|..||.... ........+... .....+
T Consensus 156 ~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~---~~~~~~ 225 (260)
T cd06606 156 TG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG--NPMAALYKIGSS---GEPPEI 225 (260)
T ss_pred cc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHhcccc---CCCcCC
Confidence 21 01133578899999999998889999999999999999999999998754 222222222211 112223
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 241 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 241 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
...++.++.+++.+||..+|++||++.+++.
T Consensus 226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 4566899999999999999999999887753
No 352
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=319.02 Aligned_cols=248 Identities=19% Similarity=0.327 Sum_probs=203.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
+.|.|+..||-|+||.||+|.++.++-..|.|++..+.. .+.+..|+.||..+.|+.++..+..|..++ ..+|+.||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-kLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-KLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-ceEEEEee
Confidence 458899999999999999999999998899998766543 356888999999999766666666555554 45777888
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 85 ~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
| ||-...++-..++.+.+.++..++.|++.||.|||+++|||||||..|||++ -+|.|+|+|||.+........
T Consensus 111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdirLADFGVSAKn~~t~q-- 185 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIRLADFGVSAKNKSTRQ-- 185 (1187)
T ss_pred cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEeeecccccccchhHHh--
Confidence 8 7777778777889999999999999999999999999999999999999997 678999999999865433221
Q ss_pred ccccccCCCCccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 164 HIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
....+.||++|||||+.. ..+|+.++||||||++|.||..+.+|...++. ...+.+|.....++.+
T Consensus 186 -----kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---MRVllKiaKSePPTLl- 256 (1187)
T KOG0579|consen 186 -----KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEPPTLL- 256 (1187)
T ss_pred -----hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch---HHHHHHHhhcCCCccc-
Confidence 125689999999999865 56799999999999999999999999987654 3444444443333322
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
-+..++..|.+|+..||.+||..||++++|+
T Consensus 257 -qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll 287 (1187)
T KOG0579|consen 257 -QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLL 287 (1187)
T ss_pred -CcchhhhHHHHHHHHHHhcCCccCCCHHHHh
Confidence 2356789999999999999999999998875
No 353
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.9e-36 Score=294.36 Aligned_cols=252 Identities=23% Similarity=0.284 Sum_probs=194.4
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
|.+.+.||.|+||+||+|.+..+++.|+||.+..... .....+|+..++.+.+++++..+..+...+...+++||++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 7889999999999999999988899999998755422 2235678899999984555555555555688889999999
Q ss_pred CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++.... ..+++..++.++.||+.+|.|||++||+|+||||+||+++ ..+.++|+|||++........
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~l~d~~~~~~~~~~~~--- 154 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVKIADFGLAREIRSRPP--- 154 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEEEeecccceeccCCCC---
Confidence 999999987543 4689999999999999999999999999999999999994 788999999999986644322
Q ss_pred cccccCCCCccCccccccccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc-----------
Q 011945 165 IPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK----------- 232 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~-~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~----------- 232 (474)
.....++..|+|||++.+ ..++.++||||||+++|||++|..||......+.......+....
T Consensus 155 -----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 155 -----YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred -----cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 123568899999998864 457899999999999999999999997654322221111111000
Q ss_pred -----------ccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 -----------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 -----------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
............+..+.+++..||..+|++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 001112222334688999999999999999999887753
No 354
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4e-36 Score=291.13 Aligned_cols=234 Identities=18% Similarity=0.234 Sum_probs=188.4
Q ss_pred eeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
||.|+||.||+|.+..+++.||||++.... ....+..|+.+++.+.|++++.. ..+...+...+++|||+ +++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~-~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKL-YRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeee-eeeEEcCCccEEEEecCCCCc
Confidence 699999999999998889999999876432 22458889999999986555554 44556777889999997 889
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccc
Q 011945 89 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 168 (474)
Q Consensus 89 L~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (474)
|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++........
T Consensus 80 L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~~~~~~~~------- 148 (262)
T cd05572 80 LWTILRD-RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAKKLKSGQK------- 148 (262)
T ss_pred HHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCcccccCcccc-------
Confidence 9999974 34689999999999999999999999999999999999994 678999999999987654321
Q ss_pred cCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHH
Q 011945 169 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 248 (474)
Q Consensus 169 ~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 248 (474)
.....|+..|++||.+.+..++.++|||||||++|+|++|..||..... +....+..+....... .....+++++
T Consensus 149 -~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~ 223 (262)
T cd05572 149 -TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-DPMEIYNDILKGNGKL---EFPNYIDKAA 223 (262)
T ss_pred -cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-CHHHHHHHHhccCCCC---CCCcccCHHH
Confidence 1234688999999999988899999999999999999999999987543 2333333333211111 1223457899
Q ss_pred HHHHHHHhcCCCCCCCC
Q 011945 249 ASYFHYCRSLRFDDKPD 265 (474)
Q Consensus 249 ~~li~~cl~~dp~~RPt 265 (474)
.++|.+||..+|++||+
T Consensus 224 ~~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 224 KDLIKQLLRRNPEERLG 240 (262)
T ss_pred HHHHHHHccCChhhCcC
Confidence 99999999999999999
No 355
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3e-36 Score=300.00 Aligned_cols=245 Identities=21% Similarity=0.304 Sum_probs=195.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
...|...+.||.|+||.||+|++..+++.||||.+.... ....+..|+++++.++|++++..+ .+.......++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~~~~l 92 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR-GCYLREHTAWL 92 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEE-EEEEcCCeeEE
Confidence 345888899999999999999999999999999875321 123577899999999866555544 45556778899
Q ss_pred EEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 81 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 81 v~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||||+.++|.+++......+++..++.++.|++.||.|||+++++||||||+|||++ .++.++|+|||++......
T Consensus 93 v~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CCCcEEECCcccceeecCc-
Confidence 999998899988876666799999999999999999999999999999999999994 6789999999998765332
Q ss_pred CccccccccCCCCccCccccccccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~---~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
....|+..|+|||++.+ ..++.++|||||||++|+|++|..||....... ....+.......
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~-- 233 (308)
T cd06634 169 ----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---ALYHIAQNESPA-- 233 (308)
T ss_pred ----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH---HHHHHhhcCCCC--
Confidence 23468899999999853 457889999999999999999999997654321 111222111111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.....++.++.++|.+||..+|++||+++++++
T Consensus 234 -~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 234 -LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred -cCcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 112357889999999999999999999887754
No 356
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6.7e-36 Score=294.12 Aligned_cols=245 Identities=20% Similarity=0.297 Sum_probs=195.1
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
.|...++||+|++|.||++.+..+++.|+||.+.... ....+.+|+.+++.+.|++++. +..+...++..++++||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~-~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVE-MYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChhe-EEEEEEcCCeEEEEEecc
Confidence 5667789999999999999998899999999875432 2345788999999998655444 444556677889999998
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 -g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++.. .++++..++.++.||+.||.|||++||+||||||+||+++ .++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~d~g~~~~~~~~~~--- 170 (285)
T cd06648 99 EGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRVKLSDFGFCAQVSKEVP--- 170 (285)
T ss_pred CCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcEEEcccccchhhccCCc---
Confidence 8899999874 5799999999999999999999999999999999999994 778999999998875543221
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCC
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 244 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 244 (474)
......|+..|+|||++.+..++.++|||||||++|||++|..||..... ...+..+....... . .....+
T Consensus 171 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~---~~~~~~~~~~~~~~-~-~~~~~~ 241 (285)
T cd06648 171 ----RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP---LQAMKRIRDNLPPK-L-KNLHKV 241 (285)
T ss_pred ----ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH---HHHHHHHHhcCCCC-C-cccccC
Confidence 11235689999999999988899999999999999999999999976432 23333333221111 1 112347
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 245 PTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 245 p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
+..+.+++..||..+|++||++.+++
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~il 267 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAELL 267 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHc
Confidence 88999999999999999999987764
No 357
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.9e-36 Score=289.27 Aligned_cols=244 Identities=18% Similarity=0.289 Sum_probs=198.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++.++||.|+||.||++.+..+++.|+||.+.... ....+..|+++++.++|. ++..+..+.......+++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHP-NIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCC-CchhhhhhhccCCEEEEEeh
Confidence 5899999999999999999999999999999876432 223577899999999855 55555555566688999999
Q ss_pred cC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 84 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 84 ~~-g~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|+ +++|.+++... ...+++..++.++.||+.||.|||+.|++|+||+|+||+++ ..+.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccchhhhccC
Confidence 98 88999988642 35689999999999999999999999999999999999995 5788999999999876543
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.. ....++..|++||.+.+..++.++|+||||+++|+|++|+.||..... ......+...... .
T Consensus 157 ~~---------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~----~ 220 (256)
T cd08530 157 MA---------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM---QDLRYKVQRGKYP----P 220 (256)
T ss_pred Cc---------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCCC----C
Confidence 11 234688999999999998899999999999999999999999976543 2222222222222 2
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
+...++.++.+++.+||..+|++||++.++++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 221 IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 23467889999999999999999999888754
No 358
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=309.88 Aligned_cols=263 Identities=21% Similarity=0.312 Sum_probs=210.0
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---------CchHHHHHHHHHHHhcCCCCCceeEEEeE
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---------KHPQLQYEAKLYKILQGGTGIPNLRWFGV 73 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---------~~~~l~~E~~il~~l~~~~~i~~l~~~~~ 73 (474)
|.+.++|-++.+||.|||++||+|.|...++.||||+-.... .++...+|..|.+.|.|+.+|..+++|..
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 567889999999999999999999999999999999844332 33457889999999999999999999999
Q ss_pred eCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCCCCcEEeeeCCCCCeEEEEec
Q 011945 74 EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (474)
Q Consensus 74 ~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~--gIiHrDIKP~NILl~~~~~~~~vkL~DF 150 (474)
+.+.+|.|+||| |.+|.-+++ ..+-++++++..|+.||+.||.||... .|||-||||.|||+-.+...|.+||+||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLK-QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLK-QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ccccceeeeeecCCCchhHHHH-hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence 999999999999 667776666 456799999999999999999999985 5999999999999987788899999999
Q ss_pred CCccccccCCCccccccccCCCCccCccccccccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHH
Q 011945 151 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 226 (474)
Q Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~----~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~ 226 (474)
||++.+.++.........-.....||.+|++||.+.-. ..+.|+||||+|||+|..+.|+.||.........-.+.
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 99999988765433333344567899999999998743 36899999999999999999999997532211111111
Q ss_pred HHhhc-cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011945 227 KISEK-KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 269 (474)
Q Consensus 227 ~i~~~-~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 269 (474)
.|... .+.. ...+-++.+.++||.+||++.-++|.+..+|
T Consensus 698 TIlkAtEVqF---P~KPvVsseAkaFIRRCLaYRKeDR~DV~qL 738 (775)
T KOG1151|consen 698 TILKATEVQF---PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQL 738 (775)
T ss_pred chhcceeccC---CCCCccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 11110 0000 0113467899999999999999999885544
No 359
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=8.4e-36 Score=286.35 Aligned_cols=245 Identities=23% Similarity=0.356 Sum_probs=200.0
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
+|++.+.||+|++|.||++.+..+++.|+||.+..... ...+..|++++..+.|++ +..+..+...+...+++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN-IVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCC-ccEEEEEEEeCCEEEEEEe
Confidence 58999999999999999999988999999998765532 345889999999998655 4455555666788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
++ +++|.+++... ..+++..++.++.|++.||.|||++||+|+||||+||+++ ..+.++|+|||++.........
T Consensus 80 ~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 80 YAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred cCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEeccccceecCCCccc
Confidence 99 77999998743 6799999999999999999999999999999999999995 5789999999999876543321
Q ss_pred cccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhc
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 242 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 242 (474)
.....++..|+|||.+.+..++.++|||+||+++|+|++|..||..... ...+..+..... ..+..
T Consensus 156 -------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~~ 221 (254)
T cd06627 156 -------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---MAALFRIVQDDH----PPLPE 221 (254)
T ss_pred -------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHhccCC----CCCCC
Confidence 1335789999999999888889999999999999999999999976442 222222221111 12345
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 243 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 243 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.++.++.+++..||..+|++||++.+++.
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 67899999999999999999999887753
No 360
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=6.2e-36 Score=292.30 Aligned_cols=252 Identities=21% Similarity=0.224 Sum_probs=196.5
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
|++.++||+|+||.||+|++..+++.||+|++.... ....+..|+.+++.+.|.+ +..+..+.......+++||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPN-IVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCC-HHHHHhhhhcCCceEEEecC
Confidence 678899999999999999999999999999877542 2345788999999998555 44454455566889999999
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 85 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 85 ~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
++++|.+++......+++..++.++.|++.||.|||++||+||||+|+||+++ .++.++|+|||++........
T Consensus 80 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~l~d~g~~~~~~~~~~--- 153 (282)
T cd07829 80 CDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLKLADFGLARAFGIPLR--- 153 (282)
T ss_pred cCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEEEecCCcccccCCCcc---
Confidence 99999999986556799999999999999999999999999999999999994 678999999999986644321
Q ss_pred cccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc------------
Q 011945 165 IPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK------------ 231 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~------------ 231 (474)
......++..|+|||.+.+. .++.++|||||||++|||++|..||...........+......
T Consensus 154 ----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07829 154 ----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKL 229 (282)
T ss_pred ----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccc
Confidence 11233567889999998876 7899999999999999999999999764432211111111000
Q ss_pred ---------cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 232 ---------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 232 ---------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
............++..+.++|..||..+|++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 230 PDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0001111222345789999999999999999999887753
No 361
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=302.18 Aligned_cols=274 Identities=21% Similarity=0.252 Sum_probs=224.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
..+|.++.+||+|+||.|.++..+.+.+.||||+++.+.. .+--..|-++|.....++.+..+..+++.-+..|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 4578899999999999999999999999999998765432 22245678888877888888888888888889999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
||||+ |++|--.++. -++|.+..+..++.+|+-||-|||++|||+||||.+|||+ +..+++||+|||+++.-.-.
T Consensus 428 VMEyvnGGDLMyhiQQ-~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQ-VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEEEecCchhhhHHHH-hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccC
Confidence 99999 8898888774 4579999999999999999999999999999999999999 68999999999999864433
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.. ...+++||+.|+|||++.-++|+..+|+|||||+||||+.|+.||.+. +..+.+..|.+....
T Consensus 504 ~~-------TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe---DE~elF~aI~ehnvs----- 568 (683)
T KOG0696|consen 504 GV-------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE---DEDELFQAIMEHNVS----- 568 (683)
T ss_pred Cc-------ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHHccCc-----
Confidence 32 236789999999999999999999999999999999999999999984 445667777766653
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccccccccCCC
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVSTP 303 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~~p 303 (474)
.++.++.+..+++...|.+.|.+|....---+ +++ ....+....||+.+...+.|++..
T Consensus 569 yPKslSkEAv~ickg~ltK~P~kRLGcg~~ge--~di---~~H~FFR~iDWek~E~~eiqPPfk 627 (683)
T KOG0696|consen 569 YPKSLSKEAVAICKGLLTKHPGKRLGCGPEGE--RDI---REHPFFRRIDWEKLERREIQPPFK 627 (683)
T ss_pred CcccccHHHHHHHHHHhhcCCccccCCCCccc--cch---hhCcchhhccHHHHhhccCCCCCC
Confidence 34678899999999999999999954211000 111 112455668999998887776653
No 362
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.2e-35 Score=289.59 Aligned_cols=248 Identities=19% Similarity=0.271 Sum_probs=182.8
Q ss_pred eeeeecCceEEEEEEEcCC--CeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 13 RKIGSGSFGEIYLGTNIQT--NEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~--~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
+.||+|+||.||+|..... ...+++|.+.... ....+.+|+.+++.++|++++..+. ++......+++|||+ +
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~-~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG-QCVEAIPYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEE-EecCCCccEEEEecCCC
Confidence 3699999999999975433 2356677655432 2346888999999998666655554 455667789999999 7
Q ss_pred CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 87 PSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 87 ~sL~~li~~~---~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
++|.+++... ...+++..++.++.||+.||+|||+++|+||||||+|||+ +.++.+||+|||++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~~~~~~~-- 154 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPSRYKEDY-- 154 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccccCcchh--
Confidence 8999998743 2346777889999999999999999999999999999999 4678899999999864322111
Q ss_pred ccccccCCCCccCccccccccccC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhc-ccc
Q 011945 164 HIPYRENKNLTGTARYASMNTHLG-------IEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEK-KVS 234 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~-------~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~-~~~ 234 (474)
........++..|+|||++.. ..++.++|||||||++|||++ |..||..... ...+..+... ...
T Consensus 155 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~~~~~~~~~~ 228 (268)
T cd05086 155 ---IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD---REVLNHVIKDQQVK 228 (268)
T ss_pred ---hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHhhcccc
Confidence 011234578899999998753 245789999999999999997 6778876433 2233332221 111
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
...+.+...+++.+.+++..|| .+|++||++++|.+.|
T Consensus 229 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 229 LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 1122334457889999999999 6899999999998776
No 363
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.2e-35 Score=298.26 Aligned_cols=252 Identities=15% Similarity=0.217 Sum_probs=184.8
Q ss_pred eeeeec--CceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 13 RKIGSG--SFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 13 ~~LG~G--~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
..||.| +||+||++.+..+++.||||++..... .+.+.+|+.+++.++|++ |..+..++..+...+++|||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~n-iv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPN-IMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC-cceEeeeEecCCceEEEEeccc
Confidence 456666 999999999999999999999765432 245788899888888655 555555666677889999998
Q ss_pred CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++ ..+.++++||+.+...........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHHHhhhhccCcccc
Confidence 77999988743 34589999999999999999999999999999999999994 678899999986654332221111
Q ss_pred cccccCCCCccCccccccccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc--------
Q 011945 165 IPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS-------- 234 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~--~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-------- 234 (474)
..+.......++..|+|||++.+. .++.++|||||||++|||++|..||.+..... .....+......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFP 237 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccc
Confidence 111111223456789999999874 47899999999999999999999997653211 111111100000
Q ss_pred ---------------------------------chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 235 ---------------------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 235 ---------------------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.........+++.+.+|+..||..||++||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l 306 (328)
T cd08226 238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306 (328)
T ss_pred hhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000011123567899999999999999999988874
No 364
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.5e-36 Score=289.20 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=196.4
Q ss_pred eeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
||.|+||.||+|++..+++.|++|++.... ....+..|+.+++.+.|++++. +......+...|++||++ +++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVK-LYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhH-HHHheecCcEEEEEEecCCCCc
Confidence 689999999999998889999999876542 2345888999999998655544 445556778889999999 789
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc-cccc
Q 011945 89 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ-HIPY 167 (474)
Q Consensus 89 L~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~-~~~~ 167 (474)
|.+++.... .+++..++.++.||+.||.|||++||+|+||+|+||+++ .++.++|+|||++.......... ....
T Consensus 80 L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 80 LASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEecccchhcccCccccccccc
Confidence 999997543 799999999999999999999999999999999999994 77899999999987654321100 0000
Q ss_pred ccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHH
Q 011945 168 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 247 (474)
Q Consensus 168 ~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 247 (474)
.......++..|++||.+.+..++.++|||||||++|+|++|..||.... ....+..+........ .. ..++..
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~--~~-~~~~~~ 229 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET---PEEIFQNILNGKIEWP--ED-VEVSDE 229 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCcCCC--cc-ccCCHH
Confidence 11234568899999999998889999999999999999999999997643 2333333333222111 11 124899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 248 FASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 248 l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
+.+++..||+.+|++||++..+.++|++.+
T Consensus 230 ~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~ 259 (265)
T cd05579 230 AIDLISKLLVPDPEKRLGAKSIEEIKNHPF 259 (265)
T ss_pred HHHHHHHHhcCCHhhcCCCccHHHHhcCcc
Confidence 999999999999999999977777777654
No 365
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-38 Score=311.28 Aligned_cols=273 Identities=19% Similarity=0.272 Sum_probs=218.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
..+++++..||-||||.|-++........+|+|++++.. ..+.+..|-+||..+. .+.|+.++-.+.+.++.|+
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhh
Confidence 356778889999999999999865555558999776532 2344778999999988 5666666666678888999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
.||.| ||.|+.++. ..+.|+..++..++..+++|++|||++|||+|||||+|+|+ +.+|-+||.|||+|+.+...
T Consensus 498 LmEaClGGElWTiLr-dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 498 LMEACLGGELWTILR-DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hHHhhcCchhhhhhh-hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccC
Confidence 99988 999999998 45689999999999999999999999999999999999999 58899999999999988765
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
.. .-+++||+.|.|||++++...+..+|.||||+++||||+|++||.+.++ ...|..|....- .-.
T Consensus 574 ~K--------TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp---mktYn~ILkGid---~i~ 639 (732)
T KOG0614|consen 574 RK--------TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP---MKTYNLILKGID---KIE 639 (732)
T ss_pred Cc--------eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch---HHHHHHHHhhhh---hhh
Confidence 43 3468999999999999999999999999999999999999999998654 444554443321 223
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccccccccCC
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVST 302 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~~ 302 (474)
+++.++....+||.++...+|.+|-.+. ..-+.++ ....|...|||..++..+.+++-
T Consensus 640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG~~--~~gI~DI---kkH~Wf~gfdweglr~~~L~pPi 697 (732)
T KOG0614|consen 640 FPRRITKTATDLIKKLCRDNPTERLGYQ--KGGINDI---KKHRWFEGFDWEGLRSRTLPPPI 697 (732)
T ss_pred cccccchhHHHHHHHHHhcCcHhhhccc--cCChHHH---HhhhhhhcCChhhhhhccCCCCc
Confidence 4567888999999999999999997631 1222222 11355678999999877665443
No 366
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-36 Score=308.55 Aligned_cols=246 Identities=23% Similarity=0.294 Sum_probs=202.7
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
...+.|.+.+.||+|.|++|.+|++..++..||||++...... ..+.+|+++|+.|.|+++|..+ .+-......|
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~-~v~~t~~~ly 131 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLF-SVIETEATLY 131 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeee-eeeeecceeE
Confidence 4457899999999999999999999999999999998765332 3478999999999966555544 4455666789
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+||||+ ++.+.+++...+ ...+.++..++.|++.+++|||+++|||||||.+|||| +.+..+||+|||++..+..
T Consensus 132 lV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEEEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeecc
Confidence 999999 999999998554 56669999999999999999999999999999999999 4777899999999998875
Q ss_pred CCCccccccccCCCCccCccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
... ..+++|++.|+|||++.|.+| ++.+|+||+|++||-|+.|.+||.+..- +..-..+...++..
T Consensus 208 ~~~--------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l---k~Lr~rvl~gk~rI-- 274 (596)
T KOG0586|consen 208 GLM--------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL---KELRPRVLRGKYRI-- 274 (596)
T ss_pred ccc--------ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc---ccccchheeeeecc--
Confidence 433 356799999999999999886 6899999999999999999999987432 22223333333322
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.-.++.+..++|.++|.++|.+|++.+++.
T Consensus 275 ---p~~ms~dce~lLrk~lvl~Pskr~~~dqim 304 (596)
T KOG0586|consen 275 ---PFYMSCDCEDLLRKFLVLNPSKRGPCDQIM 304 (596)
T ss_pred ---cceeechhHHHHHHhhccCccccCCHHHhh
Confidence 234567899999999999999999987764
No 367
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=9.8e-37 Score=287.46 Aligned_cols=266 Identities=20% Similarity=0.245 Sum_probs=205.5
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCC----eEEEEEEeccC----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN----EEVAIKLENVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~----~~vAvK~~~~~----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
...|+++++||+|.||.||+|....++ +.+|||.++.. .......+|+.+++.|+|++.|..+..+-..+..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 357999999999999999999765553 37899988765 3345689999999999998888888777777889
Q ss_pred EEEEEecCCCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeee-CCCCCeEEEEecCC
Q 011945 78 NVLVIDLLGPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL-GRRANQVYIIDFGL 152 (474)
Q Consensus 78 ~~lv~e~~g~sL~~li~~~~----~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~-~~~~~~vkL~DFGl 152 (474)
.++++||...+|.++|+... +.++...+..|+.||+.|+.|||++=|+||||||.|||+.- +...|.|||+|||+
T Consensus 103 v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 103 VWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred EEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence 99999999999999998653 35899999999999999999999999999999999999953 23458999999999
Q ss_pred ccccccCCCccccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCc------HHHHH
Q 011945 153 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKY 225 (474)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~------~~~~~ 225 (474)
++.+.++-. |......++-|..|.|||.++|.. |+.+.|||++|||+.||++-++.|.+..... ....+
T Consensus 183 aR~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 183 ARLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred HHHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 999877543 344556678899999999999865 9999999999999999999988887532210 11112
Q ss_pred HHHhh---cc----c------cc---hHHHH----------------hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 226 EKISE---KK----V------ST---SIEAL----------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 226 ~~i~~---~~----~------~~---~~~~l----------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
.+|.+ .. + +. .+..+ ...-++...+|+.++|..||.+|.|+++. |
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA---l 335 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA---L 335 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH---h
Confidence 22221 00 0 00 00000 01124457899999999999999997765 5
Q ss_pred HHHHH
Q 011945 274 RDLFI 278 (474)
Q Consensus 274 ~~l~~ 278 (474)
++.+.
T Consensus 336 eh~yF 340 (438)
T KOG0666|consen 336 EHPYF 340 (438)
T ss_pred ccccc
Confidence 55543
No 368
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2e-35 Score=292.13 Aligned_cols=244 Identities=18% Similarity=0.281 Sum_probs=192.4
Q ss_pred EEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
....+||+|+||.||++.+..+++.||||.+.... ....+..|+.+++.+.|++.+ .+..++..++..+++|||+ +
T Consensus 23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV-EMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchh-heeeEEEeCCEEEEEEecCCC
Confidence 33467999999999999999999999999875433 234588899999999865544 4445556778899999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
++|.+++. ...+++..++.++.|++.||+|||+.||+|+||||+||+++ .++.++|+|||++........
T Consensus 102 ~~L~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~dfg~~~~~~~~~~----- 171 (292)
T cd06657 102 GALTDIVT--HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVP----- 171 (292)
T ss_pred CcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEcccccceecccccc-----
Confidence 78988775 44689999999999999999999999999999999999994 678899999999876543221
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
......|+..|++||.+.+..++.++|||||||++|+|++|..||.+... ...+..+... ...... ....++.
T Consensus 172 --~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---~~~~~~~~~~-~~~~~~-~~~~~~~ 244 (292)
T cd06657 172 --RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAMKMIRDN-LPPKLK-NLHKVSP 244 (292)
T ss_pred --cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhh-CCcccC-CcccCCH
Confidence 11335789999999999888899999999999999999999999976432 2222222211 111111 1245688
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 247 EFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.+.+++.+||..+|.+||++.++++
T Consensus 245 ~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 245 SLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHHhCCcccCcCHHHHhc
Confidence 9999999999999999999888754
No 369
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=5.4e-35 Score=319.57 Aligned_cols=145 Identities=23% Similarity=0.416 Sum_probs=125.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.++|.++++||+|+||.||+|.+..+++.||||++..... ...+..|+.++..++|++++ .+..++....+.||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv-~~~~~~~~~~~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIV-HLYYSLQSANNVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcC-eEEEEEEECCEEEE
Confidence 3789999999999999999999999999999999865322 24578899999988865554 45566677788999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
||||+ |++|.+++.. ...+++..++.|+.||+.||.|||.+|||||||||+||||+ .++.+||+|||+++.
T Consensus 82 VmEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFGls~~ 153 (669)
T cd05610 82 VMEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGHIKLTDFGLSKV 153 (669)
T ss_pred EEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCCEEEEeCCCCcc
Confidence 99999 8999999974 35689999999999999999999999999999999999994 678999999999863
No 370
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7.8e-36 Score=288.79 Aligned_cols=245 Identities=22% Similarity=0.278 Sum_probs=192.0
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-------CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-------TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-------~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
+|.+.++||+|+||.||++.+..++..+++|+.+.. .....+..|+.+++.++|++++..+. +..+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHA-SFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHH-HHhcCCceEE
Confidence 699999999999999999999877777777765421 12234667899999998666555444 4455667899
Q ss_pred EEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 81 VIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 81 v~e~~-g~sL~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
+|||+ +++|.+++.. ....+++..++.++.|++.||.|||++||+|+||||+||+++ .+.++|+|||++...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeec
Confidence 99998 7899988863 245699999999999999999999999999999999999994 356999999999776
Q ss_pred ccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 157 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
..... ......|+..|+|||.+.+..++.++||||||+++|+|++|..||.... .......+.....
T Consensus 156 ~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~--- 222 (260)
T cd08222 156 MGSCD-------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN---FLSVVLRIVEGPT--- 222 (260)
T ss_pred CCCcc-------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHHcCCC---
Confidence 44322 1234568899999999988889999999999999999999999996532 2233333322221
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..+...++.++.++|.+||..+|++||++.++++
T Consensus 223 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 223 -PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 1223567889999999999999999999888754
No 371
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=304.30 Aligned_cols=261 Identities=17% Similarity=0.266 Sum_probs=212.5
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.+...+.++||+|-||+|.+|+- ..+..||||+++.... ...|..|+++|.+|+ +++|..+...+..++..++++
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchHHHH
Confidence 35678899999999999999984 4568999999876532 356999999999997 555666666777888889999
Q ss_pred ecC-CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~-l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
||+ .|+|.+++.....+ +..+....|+.||+.||+||.+.+||||||.+.|+|+ +.++++||+|||+++.+-...
T Consensus 615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccccccCC
Confidence 999 99999999865433 3566777899999999999999999999999999999 589999999999998655443
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt--G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
. |+.....+-..+|||+|.+..++++.++|||+||++|||+++ ...||..+.++...+....+....-.....
T Consensus 692 y-----y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 692 Y-----YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVL 766 (807)
T ss_pred c-----eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceec
Confidence 3 333445677899999999999999999999999999999765 889998876655444444444433333344
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
..+.-||.++.++|..||..|-++||++++|...|.+.
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 44567899999999999999999999999998887764
No 372
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=311.25 Aligned_cols=249 Identities=20% Similarity=0.244 Sum_probs=200.2
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCC---CeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
++.++.++||+|.||.|++|.|..- ...||||++.... ....|.+|+.+|.+|+|.+.|..+..+ .+ ....|
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvV-l~-qp~mM 187 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVV-LD-QPAMM 187 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeee-cc-chhhH
Confidence 3567789999999999999999753 2479999887654 346799999999999976655554433 23 66789
Q ss_pred EEecC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 81 VIDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 81 v~e~~-g~sL~~li~~-~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
|||++ .|+|.+.+.. ....|-......++.||+.||.||.++++|||||-..|+|+- ....||||||||.+.+..
T Consensus 188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLMRALGE 264 (1039)
T ss_pred HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccceeccCC
Confidence 99999 8999999986 445688999999999999999999999999999999999994 688999999999998876
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
....- .......-...|+|||.+....++.++|||+|||+||||++ |+.||.+..... .+++|..+..
T Consensus 265 ned~Y----vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q---IL~~iD~~er---- 333 (1039)
T KOG0199|consen 265 NEDMY----VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ---ILKNIDAGER---- 333 (1039)
T ss_pred CCcce----EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH---HHHhcccccc----
Confidence 54421 11122234578999999999999999999999999999998 899999976543 3333332211
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..-.+.||+.+++++..||..+|++||+|..|++
T Consensus 334 LpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred CCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 1124678999999999999999999999999864
No 373
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-38 Score=289.12 Aligned_cols=252 Identities=18% Similarity=0.277 Sum_probs=203.4
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.+.+-+..||.|+||+|++..++.+|+..|||.+..... ..+|..|.....+-..+++|+.+++..-.+...||.||
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence 344556789999999999999999999999998765443 45688899988888888887777666556666799999
Q ss_pred cCCCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 84 LLGPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 84 ~~g~sL~~li~~~----~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+|.-||..+.+.. +..+++..+-.|....+.||.||-. .+||||||||+|||+ +..|.|||||||++-.+.+
T Consensus 144 LMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 144 LMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred HHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHHH
Confidence 9999998887532 4569999999999999999999997 689999999999999 5899999999999987766
Q ss_pred CCCccccccccCCCCccCccccccccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
+... +.-.|...|||||-+.. ..|+.++||||||++|||+.||.+||.+... ..+++..+.....+..
T Consensus 221 SiAk--------T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l 290 (361)
T KOG1006|consen 221 SIAK--------TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPIL 290 (361)
T ss_pred HHHh--------hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCee
Confidence 4321 23478999999999874 3489999999999999999999999987643 4455555544443322
Q ss_pred HH-HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 237 IE-ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 237 ~~-~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.. .-+-.++..+..+|..||.+|-.+||.|.+|++
T Consensus 291 ~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 291 LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 21 122357889999999999999999999998865
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=308.46 Aligned_cols=249 Identities=20% Similarity=0.363 Sum_probs=209.2
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeE-----eCCE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGV-----EGDY 77 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~-----~~~~ 77 (474)
.-.+.|+|.+.||.|.+|.||+++++.+++.+||||...... .++++.|.++++.+.+|++++.+++++. .++.
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq 95 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ 95 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence 345789999999999999999999999999999999876644 4668999999999999999999877654 4677
Q ss_pred EEEEEecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 78 NVLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
.||||||| |||.-|+++.. +.++.|..+..|+..++.||.+||...+||||||-.|||++ .++.|||+|||++..
T Consensus 96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQ 172 (953)
T ss_pred EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---ccCcEEEeeeeeeee
Confidence 89999999 89999999744 56799999999999999999999999999999999999996 889999999999987
Q ss_pred cccCCCccccccccCCCCccCccccccccccCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhh
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGI-----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 230 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-----~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (474)
+...-. ...+++||+.|||||++... .|+.++|+||||++..||..|.+|+.++.+. ..+..|
T Consensus 173 ldsT~g-------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm---raLF~I-- 240 (953)
T KOG0587|consen 173 LDSTVG-------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM---RALFLI-- 240 (953)
T ss_pred eecccc-------cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh---hhhccC--
Confidence 765332 23678999999999998754 3788999999999999999999999887652 112222
Q ss_pred ccccchHHHH--hcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011945 231 KKVSTSIEAL--CRGYPTEFASYFHYCRSLRFDDKPDYAYL 269 (474)
Q Consensus 231 ~~~~~~~~~l--~~~~p~~l~~li~~cl~~dp~~RPt~~~l 269 (474)
...+.+.+ +..+..+|.++|..||.+|.++||...++
T Consensus 241 --pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~l 279 (953)
T KOG0587|consen 241 --PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEEL 279 (953)
T ss_pred --CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhh
Confidence 22222222 35678999999999999999999997655
No 375
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.6e-35 Score=290.98 Aligned_cols=253 Identities=19% Similarity=0.257 Sum_probs=183.0
Q ss_pred EeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
+.+.+|. +|.||.+++..+++.||||++.... ....+..|+.+++.++|++++..+. +.......+++|||+
T Consensus 6 i~~~~~~--~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~-~~~~~~~~~~~~e~~~ 82 (314)
T cd08216 6 IGKCFED--LMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVT-SFIVDSELYVVSPLMA 82 (314)
T ss_pred hhHhhcC--CceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhh-eeecCCeEEEEEeccC
Confidence 3344444 4556666666799999999876542 2246889999999999766555444 556677789999999
Q ss_pred CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 g~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++... ...+++..+..++.||+.||.|||+++|+||||||+|||++ .++.+||+|||.+..+........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceeecccccccc
Confidence 78999998743 34689999999999999999999999999999999999995 678999999999876643322111
Q ss_pred cccccCCCCccCccccccccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc----------
Q 011945 165 IPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK---------- 232 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~--~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~---------- 232 (474)
..........++..|+|||++.+. .++.++|||||||++|||++|..||...... .....++....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCccccccCchh
Confidence 111122345678899999998763 5889999999999999999999999864321 11111111000
Q ss_pred -----c-------------cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 233 -----V-------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 233 -----~-------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
. ..........++.++.+++..||..||++||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0 00000011233568899999999999999999877643
No 376
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-36 Score=310.56 Aligned_cols=258 Identities=16% Similarity=0.235 Sum_probs=213.7
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCC---eEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTN---EEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~---~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
...+|.++||.|.||+||+|+.+..+ ..||||.++.... +.+|+.|..||-++.| ++|..+.++........|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH-PNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH-PNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC-CcEEEEEEEEecCceeEE
Confidence 45678999999999999999987665 4799999887543 3459999999999995 555677777778888899
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
+.||| +++|+.+++...+.|+..++..++..|+.||.||-+.++|||||-..|||+ +.+-.+||+||||++.+.++
T Consensus 708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeecccC
Confidence 99999 999999999888899999999999999999999999999999999999999 58889999999999987665
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHH
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 238 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (474)
... +.....-.-..+|.|||.+.-.+++.++||||||++|||.+. |..||-++... +.+..|.+.-..+
T Consensus 785 ~~~----~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ---dVIkaIe~gyRLP--- 854 (996)
T KOG0196|consen 785 PEA----AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVIKAIEQGYRLP--- 854 (996)
T ss_pred CCc----cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH---HHHHHHHhccCCC---
Confidence 421 111111122579999999999999999999999999999886 99999887553 3334433322211
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 239 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
-+-+||..|..|+..||++|-.+||.|.+|+..|++++.+
T Consensus 855 -pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 855 -PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred -CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 1357999999999999999999999999999999999743
No 377
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=303.04 Aligned_cols=241 Identities=20% Similarity=0.248 Sum_probs=202.8
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
+.+.|.+...+|.|+|+.|-.+.+..+++..++|++... ..+...|+.++....+|+++..+.....++...|+|||+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 567899999999999999999999999999999998764 445678898999999999999999889999999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 85 ~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
+ |+-|.+.+. ..+....++..|+.+|+.++.|||++|||||||||+|||+. +..++++|+|||.++.....-
T Consensus 398 l~g~ell~ri~--~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~~--- 470 (612)
T KOG0603|consen 398 LDGGELLRRIR--SKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERSC--- 470 (612)
T ss_pred ccccHHHHHHH--hcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchhh---
Confidence 9 555555554 22333377888999999999999999999999999999995 478899999999998776541
Q ss_pred ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcC
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 243 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 243 (474)
.+-+-|..|.|||++...+|++++||||||++||+||+|+.||..-... .+.+..+...++. ..
T Consensus 471 -------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i~~~~~s-------~~ 534 (612)
T KOG0603|consen 471 -------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRIQMPKFS-------EC 534 (612)
T ss_pred -------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhhcCCccc-------cc
Confidence 1235688999999999999999999999999999999999999875433 3444444443332 56
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 244 YPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 244 ~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
++.+.++||..||+.||.+|+++.++.
T Consensus 535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~ 561 (612)
T KOG0603|consen 535 VSDEAKDLLQQLLQVDPALRLGADEIG 561 (612)
T ss_pred cCHHHHHHHHHhccCChhhCcChhhhc
Confidence 789999999999999999999988874
No 378
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.5e-34 Score=275.90 Aligned_cols=234 Identities=22% Similarity=0.296 Sum_probs=190.2
Q ss_pred eeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
||.|+||.||++.+..+++.||+|++..... ...+..|+.+++.+.|.+++ .+......+...+++||++ +++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIV-KLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHH-HHHHHeecCCeeEEEEecCCCCc
Confidence 6999999999999988899999998765432 23588899999999855544 4444556778899999999 999
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccc
Q 011945 89 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 168 (474)
Q Consensus 89 L~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (474)
|.+++.. ...+++..++.++.||+.||.|||+.+++|+||||+||+++ ..+.++|+|||++........
T Consensus 80 L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~~~~~~~~------- 148 (250)
T cd05123 80 LFSHLSK-EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKELSSEGS------- 148 (250)
T ss_pred HHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCcceecccCCC-------
Confidence 9999974 34689999999999999999999999999999999999994 678899999999987654321
Q ss_pred cCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHH
Q 011945 169 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 248 (474)
Q Consensus 169 ~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 248 (474)
......++..|++||.+.+...+.++|+||||+++|+|++|..||..... .+.+..+..... .+...++.++
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~l 220 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILKDPL-----RFPEFLSPEA 220 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhcCCC-----CCCCCCCHHH
Confidence 11345788999999999988899999999999999999999999965432 333333333111 2344568999
Q ss_pred HHHHHHHhcCCCCCCCCHHH
Q 011945 249 ASYFHYCRSLRFDDKPDYAY 268 (474)
Q Consensus 249 ~~li~~cl~~dp~~RPt~~~ 268 (474)
.+++.+||..||++||++.+
T Consensus 221 ~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 221 RDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHhcCCHhhCCCccc
Confidence 99999999999999999855
No 379
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.6e-35 Score=319.71 Aligned_cols=257 Identities=21% Similarity=0.224 Sum_probs=188.0
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeE--------
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGV-------- 73 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~-------- 73 (474)
...+|+.++.||+||||.||+++++-+|+.||||.+..... ...+.+|+.++.+|+|+|.|.++..+..
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 45678899999999999999999999999999998876532 2348899999999998777765310000
Q ss_pred --------------------------------------------------------------------------------
Q 011945 74 -------------------------------------------------------------------------------- 73 (474)
Q Consensus 74 -------------------------------------------------------------------------------- 73 (474)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred e----------------------C--------CEEEEEEecCCCCHHHHHHHcCCCC-CHHHHHHHHHHHHHHHHHHHHC
Q 011945 74 E----------------------G--------DYNVLVIDLLGPSLEDLFNFCSRKL-SLKTVLMLADQMINRVEFVHSK 122 (474)
Q Consensus 74 ~----------------------~--------~~~~lv~e~~g~sL~~li~~~~~~l-~~~~~~~i~~qi~~gL~yLHs~ 122 (474)
+ + .+.||-||||..+|...+...+... .....|.++.||++||.|+|++
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 0 0 3468999999666665554333333 4788999999999999999999
Q ss_pred CccccCCCCCcEEeeeCCCCCeEEEEecCCccccc----c--C--C--Cc-cccccccCCCCccCccccccccccCCC--
Q 011945 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR----D--T--A--TH-QHIPYRENKNLTGTARYASMNTHLGIE-- 189 (474)
Q Consensus 123 gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~----~--~--~--~~-~~~~~~~~~~~~GT~~Y~APE~~~~~~-- 189 (474)
|||||||||.||++ +..+.|||+|||+|+... . . . +. ....-...+..+||..|+|||++.+..
T Consensus 717 giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 717 GIIHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred ceeeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 99999999999999 488999999999998722 0 0 0 00 001111345678999999999998765
Q ss_pred -CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHH
Q 011945 190 -QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAY 268 (474)
Q Consensus 190 -~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~ 268 (474)
|+.|+|+||||+||+||+. ||.. ..+....+..+.....+.+ +.+...--+.-.++|+.|++.||.+|||+.+
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~T--sMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e 867 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGT--SMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPTATE 867 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCc--hHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence 9999999999999999984 5642 1222223333332222222 2222222345688999999999999999988
Q ss_pred HH
Q 011945 269 LK 270 (474)
Q Consensus 269 l~ 270 (474)
|+
T Consensus 868 LL 869 (1351)
T KOG1035|consen 868 LL 869 (1351)
T ss_pred Hh
Confidence 75
No 380
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-35 Score=256.55 Aligned_cols=253 Identities=20% Similarity=0.245 Sum_probs=201.9
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.+|.-.++||+|.||+||+|++..+++.||+|.+..+... ....+|+-+++.|+|.+++..+ ..-..+...-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~-dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH-DVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehh-hhhccCceeEEeH
Confidence 3577789999999999999999999999999987665433 3589999999999976655544 4445566778999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 83 e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|+|..+|..+++.+++.++.+.+..++.|++.||.|+|+++++||||||.|.|| +.++.+||+|||+++.+.-+.
T Consensus 81 e~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipv-- 155 (292)
T KOG0662|consen 81 EFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPV-- 155 (292)
T ss_pred HHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCce--
Confidence 999999999999999999999999999999999999999999999999999999 589999999999999775432
Q ss_pred cccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccc---h-
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVST---S- 236 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~---~- 236 (474)
+.-...+-|..|.+|.++.|.. |+...|+||.|||+.|+.. |.+.|.+.+..+...++.+.....-.. .
T Consensus 156 -----rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 156 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred -----EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcc
Confidence 2233446799999999999876 8999999999999999987 788888865544444444433221111 1
Q ss_pred -----------------HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 237 -----------------IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 237 -----------------~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
...+...+...=++++++.|.-+|.+|.+++..+
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaal 281 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAAL 281 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHh
Confidence 1111222334458899999999999999987653
No 381
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=284.29 Aligned_cols=265 Identities=22% Similarity=0.302 Sum_probs=209.7
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHH--hcCCCCCceeEEEeEeC---CE
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKI--LQGGTGIPNLRWFGVEG---DY 77 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~--l~~~~~i~~l~~~~~~~---~~ 77 (474)
..|..+..+.+.||+|.||+||+|.+ .|+.||||++.. .....+.+|.+|++. |+|.|++.++..-..+. ..
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~s-rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSS-RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred HhhhheeEEEEEecCccccceeeccc--cCCceEEEEecc-cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 45778899999999999999999996 589999999875 345678899998886 56666555542211111 24
Q ss_pred EEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH--------CCccccCCCCCcEEeeeCCCCCeEEEE
Q 011945 78 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS--------KSFLHRDIKPDNFLMGLGRRANQVYII 148 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs--------~gIiHrDIKP~NILl~~~~~~~~vkL~ 148 (474)
.+||.+|- .|||.|+++. ..++.+..++++..++.||++||. -.|.|||||..|||+ .+++.+.|+
T Consensus 284 LwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~C~IA 358 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIA 358 (513)
T ss_pred EEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCcEEEe
Confidence 68888887 9999999984 679999999999999999999995 249999999999999 689999999
Q ss_pred ecCCccccccCCCccccccccCCCCccCccccccccccCCC------CCchhhHHHHHHHHHHHHhC----------CCC
Q 011945 149 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE------QSRRDDLESLGYVLMYFLRG----------SLP 212 (474)
Q Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~------~s~ksDIwSlGvil~elltG----------~~P 212 (474)
|||||...........++ .+..+||.+|||||++...- .-..+||||||.|+||++.. ++|
T Consensus 359 DLGLAv~h~~~t~~idi~---~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIP---PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred eceeeEEecccCCcccCC---CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 999999887765433332 35679999999999987532 13568999999999999862 789
Q ss_pred CCCCCcCc--HHHHHHHHhhccccchHHHHhcCCc--HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011945 213 WQGLKAGT--KKQKYEKISEKKVSTSIEALCRGYP--TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 213 f~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~p--~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 278 (474)
|.+..+.+ ..++.+.+...+..+.++..+...| ..+.++|+.||..+|.-|-++-.|++.|.++.+
T Consensus 436 yyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 436 YYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred cccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 98765433 3444455555666666666555554 578999999999999999999999999999873
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.7e-34 Score=308.77 Aligned_cols=252 Identities=17% Similarity=0.173 Sum_probs=167.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCC----CeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEE----E-eEeCC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQT----NEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRW----F-GVEGD 76 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~----~-~~~~~ 76 (474)
.++|.+.++||+|+||.||+|.+..+ +..||||.+......+....| .+ ....+..+...+.. . ...+.
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e-~l-~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE-RV-RRACPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH-HH-HhhchhhHHHHHHhhhcccccccCC
Confidence 46899999999999999999999888 899999987543222111111 11 11111111111111 1 24566
Q ss_pred EEEEEEecC-CCCHHHHHHHcCCC-------------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEe
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCSRK-------------------LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLM 136 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~~~-------------------l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl 136 (474)
..+++|+|+ +++|.+++...... .....+..|+.||+.||.|||++|||||||||+|||+
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl 288 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIF 288 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEE
Confidence 789999999 77899988643211 1234567899999999999999999999999999999
Q ss_pred eeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCC----------------------CCCchh
Q 011945 137 GLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI----------------------EQSRRD 194 (474)
Q Consensus 137 ~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~----------------------~~s~ks 194 (474)
+ .+.+.+||+|||+|+.+...... ....+.+|+.|||||.+... .++.++
T Consensus 289 ~--~~~~~~KL~DFGlA~~l~~~~~~------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 289 S--EGSGSFKIIDLGAAADLRVGINY------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred e--CCCCcEEEEeCCCcccccccccc------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 5 34578999999999865433221 12456889999999976432 234567
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc-------------cchHH---HHhcCCcHHHHHHHHHHhcC
Q 011945 195 DLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------------STSIE---ALCRGYPTEFASYFHYCRSL 258 (474)
Q Consensus 195 DIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------------~~~~~---~l~~~~p~~l~~li~~cl~~ 258 (474)
||||||||||||+++.+++... ..+....+..... ..... .+........++||..||.+
T Consensus 361 DVwSlGviL~el~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSN----LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchH----HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 9999999999999988776431 1111111111000 00000 01111233456899999999
Q ss_pred CCCCCCCHHHHHH
Q 011945 259 RFDDKPDYAYLKR 271 (474)
Q Consensus 259 dp~~RPt~~~l~~ 271 (474)
||++||++.++++
T Consensus 437 dP~kR~ta~e~L~ 449 (566)
T PLN03225 437 KGRQRISAKAALA 449 (566)
T ss_pred CcccCCCHHHHhC
Confidence 9999999777643
No 383
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=280.65 Aligned_cols=274 Identities=20% Similarity=0.283 Sum_probs=221.2
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.++|.++++||+|+|..|.+++.+.|.+.||+|+++++ ..-...+.|..+.....+++.++-+..++..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 46899999999999999999999999999999986543 2334578899999999888988888888888888899
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
|.||. |++|--.+. ..++++++.+..+..+|+.||.|||++|||+||||.+|+|+ +..+++||+|+|+++.-..+
T Consensus 329 vieyv~ggdlmfhmq-rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEecCcceeeehh-hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCC
Confidence 99998 888876666 35689999999999999999999999999999999999999 68999999999999865544
Q ss_pred CCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CcCcHHHHHHHHhhcccc
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL-----KAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~-----~~~~~~~~~~~i~~~~~~ 234 (474)
.. ...+++||+.|+|||++.|.+|+..+|+|+|||+|+||+.|+.||.-. ...+....++.|.++...
T Consensus 405 gd-------~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir 477 (593)
T KOG0695|consen 405 GD-------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR 477 (593)
T ss_pred Cc-------ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc
Confidence 33 236789999999999999999999999999999999999999999632 122334445556555543
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccccccc
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ 299 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~ 299 (474)
++..++-....+++.-|++||.+|....- .--|.++ .+.++..-.||+.+...|.-
T Consensus 478 -----iprslsvkas~vlkgflnkdp~erlgc~~-~~g~~di---k~h~ffr~idwd~leqk~v~ 533 (593)
T KOG0695|consen 478 -----IPRSLSVKASHVLKGFLNKDPKERLGCRP-QTGFSDI---KSHAFFRSIDWDLLEQKQVL 533 (593)
T ss_pred -----ccceeehhhHHHHHHhhcCCcHHhcCCCc-ccchhhh---hcchhhhhCCHHHHhhcccC
Confidence 34566778889999999999999954221 0123333 33455567899998765443
No 384
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-34 Score=281.31 Aligned_cols=132 Identities=27% Similarity=0.520 Sum_probs=113.1
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCC-------CCcee-EEE---e
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGT-------GIPNL-RWF---G 72 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~-------~i~~l-~~~---~ 72 (474)
.+++|.+.++||.|.|++||+|.|..+.+.||+|+.+... ..+....|+++|+.+.... +|+.+ +.| +
T Consensus 76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 3489999999999999999999999999999999987543 3455788999999987433 33333 333 4
Q ss_pred EeCCEEEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEe
Q 011945 73 VEGDYNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLM 136 (474)
Q Consensus 73 ~~~~~~~lv~e~~g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl 136 (474)
..+.+.|||+|++|.+|..+|.+++ +.++...+..|+.||+.||.|||. +||||-||||+|||+
T Consensus 156 pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 5788999999999999999998664 459999999999999999999997 799999999999999
No 385
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-36 Score=277.11 Aligned_cols=259 Identities=20% Similarity=0.225 Sum_probs=199.7
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEecc---C-CCchHHHHHHHHHHHhcCCCCCceeEEEeE-------e
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV---K-TKHPQLQYEAKLYKILQGGTGIPNLRWFGV-------E 74 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~---~-~~~~~l~~E~~il~~l~~~~~i~~l~~~~~-------~ 74 (474)
.+.|+-..+||+|.||+||+|+...+|+.||+|++-. + .......+|+++|..|+|.+.+..+..+.. +
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 4678888999999999999999999999999995322 1 223457899999999998776655533321 2
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
...+|+|+++|..+|..++.....+|+..++..++.+++.||.|+|...|+|||+|++|+||+ .++.+||+|||+++
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt---~dgilklADFGlar 172 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT---KDGILKLADFGLAR 172 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc---CCceEEeecccccc
Confidence 345899999999999999987777899999999999999999999999999999999999994 78999999999998
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (474)
.+.......... -+..+-|..|.+||.+.|. +|+++.|||..||||.||++|.+-|++.........+..++...-
T Consensus 173 ~fs~~~n~~kpr---ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 173 AFSTSKNVVKPR---YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred ceecccccCCCC---cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 887654433221 2345669999999999985 589999999999999999999999988554333333332221110
Q ss_pred ---cchH----------------------HHHhc--CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 234 ---STSI----------------------EALCR--GYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 234 ---~~~~----------------------~~l~~--~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.+.. +...+ .-.++..+|+..++.+||.+|+++++++
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 0000 00000 1135778999999999999999988774
No 386
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-34 Score=292.31 Aligned_cols=275 Identities=22% Similarity=0.257 Sum_probs=207.5
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
-|..++.||-|+||+|.++....|...||+|.+.+... ...+..|..||.... .+.|+.+++.+.+.+..|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCceEEEE
Confidence 48889999999999999999989999999997654321 223677888888776 567778888888999999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||. ||++-.|+-. -+-|.+..+..++.++.+|+++.|..|+|||||||+|||| |.+|+|||+|||||.-+.-...
T Consensus 709 dYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred eccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceeccc
Confidence 999 9999998874 4579999999999999999999999999999999999999 5899999999999986542211
Q ss_pred --------cccc-------------------ccc--------cCCCCccCccccccccccCCCCCchhhHHHHHHHHHHH
Q 011945 162 --------HQHI-------------------PYR--------ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYF 206 (474)
Q Consensus 162 --------~~~~-------------------~~~--------~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~el 206 (474)
+... ..+ -.-.++||+.|+|||++....++.-+|+||.|||||||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 1000 000 12346799999999999999999999999999999999
Q ss_pred HhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Q 011945 207 LRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDY 286 (474)
Q Consensus 207 ltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~ 286 (474)
+.|+.||..........++..+.... --..+..++.+..++|.++. -+++.|..-.- .+ .-....|..
T Consensus 865 ~~g~~pf~~~tp~~tq~kv~nw~~~l----~~~~~~~ls~e~~~li~kLc-~sad~RLGkng-----~d--~vKaHpfFk 932 (1034)
T KOG0608|consen 865 LVGQPPFLADTPGETQYKVINWRNFL----HIPYQGNLSKEALDLIQKLC-CSADSRLGKNG-----AD--QVKAHPFFK 932 (1034)
T ss_pred hhCCCCccCCCCCcceeeeeehhhcc----ccccccccCHHHHHHHHHHh-cChhhhhcccc-----hh--hhhcCcccc
Confidence 99999998776654333332221110 01124567888888887754 35667743211 11 123356777
Q ss_pred ccccccccccccc
Q 011945 287 VFDWTILKYQQSQ 299 (474)
Q Consensus 287 ~~dw~~~~~~~~~ 299 (474)
..||..++.+.++
T Consensus 933 gIDfsslRkq~Ap 945 (1034)
T KOG0608|consen 933 GIDFSSLRKQRAP 945 (1034)
T ss_pred ccchHhhhhccCC
Confidence 8899886655444
No 387
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=4.8e-35 Score=291.58 Aligned_cols=206 Identities=22% Similarity=0.281 Sum_probs=175.3
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-CCchHHHHHHHHHHHhcCC-----CCCceeEEEeEeCC
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLQYEAKLYKILQGG-----TGIPNLRWFGVEGD 76 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~l~~E~~il~~l~~~-----~~i~~l~~~~~~~~ 76 (474)
.++.++|.+....|+|-|++|..|.+...|..|||||+... .+++.=+.|++||++|+.. .++..+.-.+...+
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 46778999999999999999999999999999999998664 4566678999999999742 23334444456778
Q ss_pred EEEEEEecCCCCHHHHHHHcCCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 77 YNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 77 ~~~lv~e~~g~sL~~li~~~~~~--l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
+.|||+|.+.-+|.++++..+.. |....+..++.|+..||..|-.+||+|.||||+||||. .....+||||||.|.
T Consensus 508 HLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 508 HLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDFGSAS 585 (752)
T ss_pred eeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccCcccc
Confidence 89999999999999999866543 88899999999999999999999999999999999996 456789999999998
Q ss_pred ccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 219 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~ 219 (474)
...+... +.+.-+..|.|||+++|.+|+...|+||.||+||||.||+..|.+....
T Consensus 586 ~~~enei---------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN 641 (752)
T KOG0670|consen 586 FASENEI---------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN 641 (752)
T ss_pred ccccccc---------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence 7655433 1234567899999999999999999999999999999999999886543
No 388
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=8.2e-34 Score=271.76 Aligned_cols=220 Identities=16% Similarity=0.150 Sum_probs=173.7
Q ss_pred cCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCCHHHHHHHc
Q 011945 18 GSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFC 96 (474)
Q Consensus 18 G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~ 96 (474)
|.||.||++.+..+++.||+|.+.... ....|...+.... ++++..+..++......+++|||+ +++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~- 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---EYSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK- 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---hhhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-
Confidence 899999999999999999999886532 2344444444444 455666666667778899999999 7899999864
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccC
Q 011945 97 SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 176 (474)
Q Consensus 97 ~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT 176 (474)
...+++..+..++.|++.||.|||++||+||||||+||+++ .++.++|+|||++....... ....++
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~~~~~~----------~~~~~~ 145 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSEVEDSC----------DGEAVE 145 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhcccccc----------ccCCcC
Confidence 34699999999999999999999999999999999999994 67889999999886554321 123567
Q ss_pred ccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHh
Q 011945 177 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCR 256 (474)
Q Consensus 177 ~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl 256 (474)
..|+|||.+.+..++.++|||||||++|||++|..||...... +.. .. ...+...+++.+.++|.+||
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--------~~~-~~---~~~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG--------INT-HT---TLNIPEWVSEEARSLLQQLL 213 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--------ccc-cc---ccCCcccCCHHHHHHHHHHc
Confidence 7899999998888999999999999999999999888642211 000 00 01123457889999999999
Q ss_pred cCCCCCCCCHH
Q 011945 257 SLRFDDKPDYA 267 (474)
Q Consensus 257 ~~dp~~RPt~~ 267 (474)
+.||++||++.
T Consensus 214 ~~dp~~R~~~~ 224 (237)
T cd05576 214 QFNPTERLGAG 224 (237)
T ss_pred cCCHHHhcCCC
Confidence 99999999863
No 389
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-33 Score=302.05 Aligned_cols=257 Identities=21% Similarity=0.320 Sum_probs=206.3
Q ss_pred cEEEeeeeeecCceEEEEEEEcC-------CCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQ-------TNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~-------~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
+..+.+.||+|.||.||+|.-.. ....||||..+.... .+.+..|+++|+.+.+|+++..+.+++.....
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~ 376 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP 376 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence 34677799999999999997331 145799998765443 35689999999999988888888777777888
Q ss_pred EEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC
Q 011945 78 NVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~---------------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~ 141 (474)
.++++||+ .|+|.+++..+. ..++....+.++.||+.|++||+++++|||||-..|||++ .
T Consensus 377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~---~ 453 (609)
T KOG0200|consen 377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT---K 453 (609)
T ss_pred eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec---C
Confidence 88999998 899999998655 2489999999999999999999999999999999999995 7
Q ss_pred CCeEEEEecCCccccccCCCccccccccCCCCc--cCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCc
Q 011945 142 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT--GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA 218 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~--GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~ 218 (474)
+..+||+|||+|+....... |. .+.-. -...|||||.+....|+.++||||||++|||+++ |..||.+...
T Consensus 454 ~~~~kIaDFGlar~~~~~~~-----y~-~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~ 527 (609)
T KOG0200|consen 454 NKVIKIADFGLARDHYNKDY-----YR-TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP 527 (609)
T ss_pred CCEEEEccccceeccCCCCc-----eE-ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence 78999999999986554332 11 11112 2456999999999999999999999999999999 9999988442
Q ss_pred CcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 219 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
. ...++.+.... ....+..|++++.+++..||..+|++||++.++.+.|..++..
T Consensus 528 ~--~~l~~~l~~G~----r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~ 582 (609)
T KOG0200|consen 528 T--EELLEFLKEGN----RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD 582 (609)
T ss_pred H--HHHHHHHhcCC----CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence 1 22233332222 2233467799999999999999999999999999999997654
No 390
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=278.36 Aligned_cols=257 Identities=22% Similarity=0.298 Sum_probs=194.8
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhc-CCCCCceeEEEeEe----CCEEEEE
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQ-GGTGIPNLRWFGVE----GDYNVLV 81 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~-~~~~i~~l~~~~~~----~~~~~lv 81 (474)
....+.++||+|.||.||+|. -+++.||||++... ....++.|..|+.... .|++|..+...... ...++||
T Consensus 210 ~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~-~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQ-EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhh--ccCceeEEEecCHH-HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 346778999999999999998 56799999998753 4567899999988642 24444444333332 3367888
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH---------CCccccCCCCCcEEeeeCCCCCeEEEEecC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---------KSFLHRDIKPDNFLMGLGRRANQVYIIDFG 151 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs---------~gIiHrDIKP~NILl~~~~~~~~vkL~DFG 151 (474)
++|. .|+|.++++ ...++|....+|+..|++||+|||+ ..|+|||||..|||| ..+.++.|+|||
T Consensus 287 t~fh~kGsL~dyL~--~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaDFG 361 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK--ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIADFG 361 (534)
T ss_pred eeeccCCcHHHHHH--hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeeccc
Confidence 8888 999999998 4579999999999999999999997 359999999999999 588999999999
Q ss_pred CccccccCCCccccccccCCCCccCccccccccccCCC-CC-----chhhHHHHHHHHHHHHhCC------------CCC
Q 011945 152 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QS-----RRDDLESLGYVLMYFLRGS------------LPW 213 (474)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s-----~ksDIwSlGvil~elltG~------------~Pf 213 (474)
||..+..... ....-..+||.+|||||++.|.- +. .+.||||+|.|||||++.- +||
T Consensus 362 LAl~~~p~~~-----~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf 436 (534)
T KOG3653|consen 362 LALRLEPGKP-----QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF 436 (534)
T ss_pred eeEEecCCCC-----CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence 9998874322 12233469999999999998743 22 4689999999999999842 334
Q ss_pred C---CCCcCcHHHHHHHHhhccccchHHHHhcC--CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 214 Q---GLKAGTKKQKYEKISEKKVSTSIEALCRG--YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 214 ~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~--~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
+ +.. .+..+....+..++..+.++..+.. ...-+.+.++.||..|++.|.|+.-+.+.+.++.
T Consensus 437 e~evG~h-Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 437 EAEVGNH-PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred hHHhcCC-CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 3 111 1233333444555555544443322 3467899999999999999999999988888774
No 391
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.5e-33 Score=315.10 Aligned_cols=249 Identities=14% Similarity=0.166 Sum_probs=185.4
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-C
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 86 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g 86 (474)
.|...+.||+|+||.||+|++..++..||||.+..... ....|++++++++|++++ .+..++......++||||+ +
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~HpnIv-~~~~~~~~~~~~~lv~Ey~~~ 767 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--IPSSEIADMGKLQHPNIV-KLIGLCRSEKGAYLIHEYIEG 767 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--ccHHHHHHHhhCCCCCcc-eEEEEEEcCCCCEEEEeCCCC
Confidence 45667789999999999999988999999998764322 234578899999765544 5555566677889999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 163 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLH---s~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (474)
++|.+++. .+++..+..|+.||+.||+||| +.+|+||||||+||+++ ..+.+++. ||........
T Consensus 768 g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~---~~~~~~~~-~~~~~~~~~~---- 835 (968)
T PLN00113 768 KNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID---GKDEPHLR-LSLPGLLCTD---- 835 (968)
T ss_pred CcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC---CCCceEEE-eccccccccC----
Confidence 99999996 4899999999999999999999 67999999999999994 55556654 6655433211
Q ss_pred ccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC--cHHHHHHHHhhc-cc----cch
Q 011945 164 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG--TKKQKYEKISEK-KV----STS 236 (474)
Q Consensus 164 ~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~--~~~~~~~~i~~~-~~----~~~ 236 (474)
....||..|+|||++.+..++.++|||||||++|||++|+.||...... ...+........ .. ...
T Consensus 836 -------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (968)
T PLN00113 836 -------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPS 908 (968)
T ss_pred -------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCcc
Confidence 1236889999999999999999999999999999999999999543211 111111100000 00 000
Q ss_pred HH---HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011945 237 IE---ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 237 ~~---~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 278 (474)
.. ........++.+++..||+.||++||++.++.+.|+++..
T Consensus 909 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred ccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 00 0000112467889999999999999999999999988754
No 392
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=7.8e-32 Score=255.55 Aligned_cols=236 Identities=25% Similarity=0.331 Sum_probs=187.5
Q ss_pred CceEEEEEEEcCCCeEEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecCCC-CHHHHHH
Q 011945 19 SFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGP-SLEDLFN 94 (474)
Q Consensus 19 ~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~g~-sL~~li~ 94 (474)
+||.||+|.+..+++.||+|++..... .+.+..|++.++.+++ +++..+..+.......++++|++++ +|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH-PNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC-CcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 589999999988899999999876544 4678999999999964 4555555556666788999999955 9999987
Q ss_pred HcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccccCCCCc
Q 011945 95 FCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 174 (474)
Q Consensus 95 ~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~ 174 (474)
... .+++..++.++.+++.+|.|||+.+|+|+||+|.||+++ .++.++|+|||++........ .....
T Consensus 80 ~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~~~~~~~~~--------~~~~~ 147 (244)
T smart00220 80 KRG-RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLARQLDPGGL--------LTTFV 147 (244)
T ss_pred hcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccceeeeccccc--------ccccc
Confidence 433 389999999999999999999999999999999999994 668999999999987655321 13457
Q ss_pred cCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHH
Q 011945 175 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHY 254 (474)
Q Consensus 175 GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~ 254 (474)
++..|++||.+.+..++.++|||+||+++|+|++|..||..... ....+..+....... ......++.++.+++.+
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~ 223 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELFKKIGKPKPPF--PPPEWKISPEAKDLIRK 223 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHhccCCCC--ccccccCCHHHHHHHHH
Confidence 88999999999988899999999999999999999999976322 122222222211111 11111278999999999
Q ss_pred HhcCCCCCCCCHHHHHH
Q 011945 255 CRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 255 cl~~dp~~RPt~~~l~~ 271 (474)
||..+|++||++.++++
T Consensus 224 ~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 224 LLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HccCCchhccCHHHHhh
Confidence 99999999999888764
No 393
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-33 Score=288.68 Aligned_cols=255 Identities=21% Similarity=0.259 Sum_probs=208.4
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCe----EEEEEEeccCCC---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLENVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAvK~~~~~~~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
.+..++||+|+||+||+|.+...++ +||||++..... ...+..|+-+|..|.|++.+..+...-... ..||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~--~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST--LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch--HHHH
Confidence 3456899999999999999976654 688898755433 456899999999999877776665443332 5567
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
.+|+ .|+|.|+++....++-.+..+.|..||++||.|||.+++|||||-..|||+ .....+||.|||+|+.+..+.
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCccc
Confidence 7777 999999999888899999999999999999999999999999999999999 588999999999999887665
Q ss_pred CccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
..-+. ....-.+.|||-|.+....|+.++|||||||++||++| |..||.+....+....+++-.. ..
T Consensus 853 ~ey~~-----~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-------Ls 920 (1177)
T KOG1025|consen 853 KEYSA-----PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-------LS 920 (1177)
T ss_pred ccccc-----cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-------CC
Confidence 43322 12233578999999999999999999999999999999 9999999877655555443222 11
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
-+.-++-+++-++.+||..|++.||+|+++...|.++...-
T Consensus 921 qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 921 QPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred CCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 23567889999999999999999999999999998886543
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=293.68 Aligned_cols=245 Identities=20% Similarity=0.231 Sum_probs=190.6
Q ss_pred eeeeeecCceE-EEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecCCCCHH
Q 011945 12 GRKIGSGSFGE-IYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLE 90 (474)
Q Consensus 12 ~~~LG~G~fG~-Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~g~sL~ 90 (474)
.+.+|.|+.|+ ||+|. ..++.||||.+-. ....-.++|+..|+.-..|++|..++....+..+.||..|+|..+|.
T Consensus 514 ~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~-e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL~ 590 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGV--YEGREVAVKRLLE-EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSLQ 590 (903)
T ss_pred HHHcccCCCCcEEEEEe--eCCceehHHHHhh-HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhHH
Confidence 35678999885 79998 6789999996532 23456789999999999999998888888889999999999999999
Q ss_pred HHHHHcCCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCC--CCCeEEEEecCCccccccCCCcccc
Q 011945 91 DLFNFCSRK---LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 91 ~li~~~~~~---l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~--~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
++++..... ......+.++.|++.||++||+.+||||||||.||||+..+ ....++|+|||+++++.....
T Consensus 591 dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s---- 666 (903)
T KOG1027|consen 591 DLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS---- 666 (903)
T ss_pred HHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc----
Confidence 999853111 11145678899999999999999999999999999997532 345789999999998876543
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCC
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG-SLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 244 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 244 (474)
.+....+..||.+|+|||++.....+..+|||||||++|+.++| .+||.+... .-..|......- ..+...-
T Consensus 667 S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~-----R~~NIl~~~~~L--~~L~~~~ 739 (903)
T KOG1027|consen 667 SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE-----RQANILTGNYTL--VHLEPLP 739 (903)
T ss_pred hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH-----hhhhhhcCccce--eeeccCc
Confidence 23345678999999999999998888999999999999999995 999965322 212222221111 0011111
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 245 PTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 245 p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
..+..+||..|++.+|..||++.+|+
T Consensus 740 d~eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 740 DCEAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred hHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 12889999999999999999988774
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-32 Score=246.27 Aligned_cols=211 Identities=21% Similarity=0.281 Sum_probs=171.2
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
...-+..||+|+||.|-+.++..+|...|+|-+.... ...++.+|+.+..+...++.++.+++.-......+|.||.
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 3445678999999999999999999999999765543 2345778888877777777766665544455567999999
Q ss_pred CCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 85 LGPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 85 ~g~sL~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs~-gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
+..||..+... .++.+++..+-+|+..++.||.|||++ .+||||+||+|||| +..|+|||||||++-.+.++.
T Consensus 127 M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 127 MDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred hhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceeehhhh
Confidence 99999887653 366799999999999999999999985 89999999999999 689999999999998877654
Q ss_pred CccccccccCCCCccCccccccccccC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLG----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 231 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~----~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~ 231 (474)
.. +.-.|...|||||.+.. ..|+.|+||||||+++.||.++++||... .+..+++..+.+.
T Consensus 204 Ak--------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w--~tpF~qLkqvVee 268 (282)
T KOG0984|consen 204 AK--------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW--GTPFQQLKQVVEE 268 (282)
T ss_pred HH--------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc--CCHHHHHHHHhcC
Confidence 31 22478899999998874 35899999999999999999999999764 3456666665543
No 396
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.98 E-value=6.7e-31 Score=275.34 Aligned_cols=253 Identities=20% Similarity=0.211 Sum_probs=174.4
Q ss_pred CCcEEEeeeeeecCceEEEEEEEc----------------CCCeEEEEEEeccCCC----------------chHHHHHH
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNI----------------QTNEEVAIKLENVKTK----------------HPQLQYEA 53 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~----------------~~~~~vAvK~~~~~~~----------------~~~l~~E~ 53 (474)
.++|++.++||+|+||+||+|.+. ..++.||||.+..... ......|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 568999999999999999999752 2356799998754321 11234467
Q ss_pred HHHHHhcCCCCCc-----eeEEEeE-------eCCEEEEEEecC-CCCHHHHHHHcC-----------------------
Q 011945 54 KLYKILQGGTGIP-----NLRWFGV-------EGDYNVLVIDLL-GPSLEDLFNFCS----------------------- 97 (474)
Q Consensus 54 ~il~~l~~~~~i~-----~l~~~~~-------~~~~~~lv~e~~-g~sL~~li~~~~----------------------- 97 (474)
.++.++++++++. .+.++.. .....+||+||+ +++|.+++....
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 7777777665422 2222211 234579999999 889999886321
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCc
Q 011945 98 RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 177 (474)
Q Consensus 98 ~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~ 177 (474)
..+++..++.|+.||+.||.|||+++|+||||||+|||++ .++.+||+|||++.......... .....+|+
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~------~~~g~~tp 374 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINFN------PLYGMLDP 374 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCccC------ccccCCCc
Confidence 1246778899999999999999999999999999999994 67889999999997554321100 11224588
Q ss_pred cccccccccCCCC----------------------CchhhHHHHHHHHHHHHhCCC-CCCCCCcCcH--------HHHHH
Q 011945 178 RYASMNTHLGIEQ----------------------SRRDDLESLGYVLMYFLRGSL-PWQGLKAGTK--------KQKYE 226 (474)
Q Consensus 178 ~Y~APE~~~~~~~----------------------s~ksDIwSlGvil~elltG~~-Pf~~~~~~~~--------~~~~~ 226 (474)
.|+|||++..... ..+.||||+|||||+|++|.+ ||.+...... ...+.
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 9999999864321 234799999999999999986 7764321111 01111
Q ss_pred HHhhccccchHHHHhcCCcHHHHHHHHHHhcCCC---CCCCCHHHHH
Q 011945 227 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRF---DDKPDYAYLK 270 (474)
Q Consensus 227 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp---~~RPt~~~l~ 270 (474)
.+...... . ......++..++|+.+||..+| .+|+++++++
T Consensus 455 ~~~~~~~~--~-~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL 498 (507)
T PLN03224 455 MYKGQKYD--F-SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQAL 498 (507)
T ss_pred hhcccCCC--c-ccccccChHHHHHHHHHhccCCCCcccCCCHHHHh
Confidence 11111111 1 1234568899999999999866 6899977763
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-33 Score=262.29 Aligned_cols=253 Identities=19% Similarity=0.285 Sum_probs=189.3
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCchHHHHHHHHHHHhcCCCCCceeEEEeEeC----
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG---- 75 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~---- 75 (474)
....+.+-.+.||.|+||.||.+.|..+|+.||+|.+..- ...+.+.+|+++|..++|.|.+..++......
T Consensus 50 qqq~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfF 129 (449)
T KOG0664|consen 50 QQQQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFF 129 (449)
T ss_pred cccccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHH
Confidence 3444556678899999999999999999999999975432 23456889999999999887766665443321
Q ss_pred CEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 76 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 76 ~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
...|++.|++..+|..+|- ....++.+.+.-++.||+.||.|||+.+|+||||||.|.|+ +.+..+||||||+|+.
T Consensus 130 qEiYV~TELmQSDLHKIIV-SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 130 QELYVLTELMQSDLHKIIV-SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLART 205 (449)
T ss_pred HHHHHHHHHHHhhhhheec-cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccc
Confidence 1246778888888888775 35679999999999999999999999999999999999999 5888999999999997
Q ss_pred cccCCCccccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcccc
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 234 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (474)
...... .++ +..+-|-.|.|||+++|.. |+...||||.|||+.||+-.+..|+...+....+.+..+.. .
T Consensus 206 ee~d~~-~hM-----TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLG---T 276 (449)
T KOG0664|consen 206 WDQRDR-LNM-----THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLG---T 276 (449)
T ss_pred cchhhh-hhh-----HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhC---C
Confidence 655432 111 2235688999999999865 89999999999999999999999987655433333333221 1
Q ss_pred chHHHH---hc--------------------------CCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011945 235 TSIEAL---CR--------------------------GYPTEFASYFHYCRSLRFDDKPDYAYL 269 (474)
Q Consensus 235 ~~~~~l---~~--------------------------~~p~~l~~li~~cl~~dp~~RPt~~~l 269 (474)
+..+.. |+ .-.-+...++..++..||++|.+.++.
T Consensus 277 Ps~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A 340 (449)
T KOG0664|consen 277 PSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEA 340 (449)
T ss_pred CcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhh
Confidence 111111 11 012356677888889999999875544
No 398
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-32 Score=251.42 Aligned_cols=266 Identities=20% Similarity=0.302 Sum_probs=203.4
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC-CCchHHHHHHHHHHHhcCCCCC-ceeEEEeEeCCEEEEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLQYEAKLYKILQGGTGI-PNLRWFGVEGDYNVLV 81 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~l~~E~~il~~l~~~~~i-~~l~~~~~~~~~~~lv 81 (474)
.+.+.|.|.+.||+|-||.+-+|+++.++..+++|.+... ....+|.+|..---.|.+|.+| ..+...+...++++++
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3567899999999999999999999999999999977554 3446688888766667655544 4455556677799999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
|||+ .++|..-+. ...+-+.....++.|++.||.|||++++||||||.+||||-. .+...|||||||+.+......
T Consensus 101 qE~aP~gdL~snv~--~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~-~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVE--AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD-ADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred eccCccchhhhhcC--cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec-CCccEEEeeecccccccCcee
Confidence 9999 788877665 345889999999999999999999999999999999999953 345589999999987543321
Q ss_pred CccccccccCCCCccCccccccccccCCC-----CCchhhHHHHHHHHHHHHhCCCCCCCCCcCc-HHHHHHHHhhcccc
Q 011945 161 THQHIPYRENKNLTGTARYASMNTHLGIE-----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGT-KKQKYEKISEKKVS 234 (474)
Q Consensus 161 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-----~s~ksDIwSlGvil~elltG~~Pf~~~~~~~-~~~~~~~i~~~~~~ 234 (474)
. ...-+..|.+||...... ..+.+|||.||+++|.+|+|.+||+.....+ ....+.+....+..
T Consensus 178 ~----------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 178 K----------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP 247 (378)
T ss_pred h----------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc
Confidence 1 123466799999876432 4678999999999999999999998432211 12233333333332
Q ss_pred chHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 011945 235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQ 283 (474)
Q Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~ 283 (474)
..+....-+++.+..++++-|..+|++|--..+..+...+++.+.-+.
T Consensus 248 -~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i~ 295 (378)
T KOG1345|consen 248 -ALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLIK 295 (378)
T ss_pred -cCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhhc
Confidence 445556778899999999999999999977777777777777666543
No 399
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=4.4e-32 Score=246.41 Aligned_cols=250 Identities=19% Similarity=0.316 Sum_probs=190.4
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeE--eCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV--EGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~--~~~~~~lv~e 83 (474)
.++|++.+++|+|-|++||.|.+..+++.++||+++.- ..+.+.+|++||+.|.++++|..+..... ......|++|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 46799999999999999999999999999999998753 45679999999999997777776654433 4455678888
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
+. ..+...+.. .++...+..++.|++.||.|+|++||+|||+||.|++|+ .....++|+|+|+|..+.....
T Consensus 116 ~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYHp~~e- 188 (338)
T KOG0668|consen 116 YVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKE- 188 (338)
T ss_pred hhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcCCCce-
Confidence 88 455555443 688899999999999999999999999999999999996 5667899999999987765432
Q ss_pred cccccccCCCCccCccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCC-CCcCcHHHHHHHHhhc---------
Q 011945 163 QHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQG-LKAGTKKQKYEKISEK--------- 231 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~-~~~~~~~~~~~~i~~~--------- 231 (474)
-+-.+.+..|--||.+.... |+..-|+|||||+|..|+..+-||.. ....+...++.++...
T Consensus 189 -------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 189 -------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred -------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 12335667788899988754 88999999999999999999988853 2222222222222110
Q ss_pred ---cccchHHHHh----------------c-CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 232 ---KVSTSIEALC----------------R-GYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 232 ---~~~~~~~~l~----------------~-~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.+.+....+. . -..++..+|+.++|..|-++|+|+.|..
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam 320 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM 320 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence 0111111111 0 1258899999999999999999988763
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=269.80 Aligned_cols=195 Identities=23% Similarity=0.361 Sum_probs=167.6
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC----------CchHHHHHHHHHHHhc--CCCCCceeEEEeEeC
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----------KHPQLQYEAKLYKILQ--GGTGIPNLRWFGVEG 75 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----------~~~~l~~E~~il~~l~--~~~~i~~l~~~~~~~ 75 (474)
.|..++.||+|+||.|++|.++.+...|+||.+.+.. .-..+-.|++||..|+ .|.+|..+..|++++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 5999999999999999999999999999999765432 1123677999999998 344555666778888
Q ss_pred CEEEEEEecC--CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 76 DYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 76 ~~~~lv~e~~--g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
+++||+||.- |-+|.++|+ ....+++.++..|+.||+.|+++||+.||||||||-+|+++ +.+|.+||+|||.|
T Consensus 642 d~yyl~te~hg~gIDLFd~IE-~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsa 717 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIE-FKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSA 717 (772)
T ss_pred CeeEEEecCCCCCcchhhhhh-ccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccch
Confidence 9999999988 567888887 35679999999999999999999999999999999999999 58999999999999
Q ss_pred cccccCCCccccccccCCCCccCccccccccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 011945 154 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQG 215 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~ksDIwSlGvil~elltG~~Pf~~ 215 (474)
....... ...++||..|+|||++.|..| +..-|||+||++||.++....||.+
T Consensus 718 a~~ksgp---------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 718 AYTKSGP---------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhcCCC---------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 7654432 246799999999999999886 6788999999999999999999975
No 401
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=6e-31 Score=254.87 Aligned_cols=260 Identities=18% Similarity=0.247 Sum_probs=203.0
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCC-----CeEEEEEEeccCCCch---HHHHHHHHHHHhcCCCCCceeEEEeEeCCE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLENVKTKHP---QLQYEAKLYKILQGGTGIPNLRWFGVEGDY 77 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAvK~~~~~~~~~---~l~~E~~il~~l~~~~~i~~l~~~~~~~~~ 77 (474)
..++++...+-+|.||.||.|.++.. .+.|.+|.++.....- .+..|.-++..+.|++....+.....+...
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~ 362 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT 362 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence 34688888999999999999987643 3456677655433322 256677777778877777777766667777
Q ss_pred EEEEEecC-CCCHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEe
Q 011945 78 NVLVIDLL-GPSLEDLFNFCS-------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 149 (474)
Q Consensus 78 ~~lv~e~~-g~sL~~li~~~~-------~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~D 149 (474)
.++.+.++ -++|..++..|. +.++..+...++.|++.|++|||++||||.||...|++| ++.-+|||+|
T Consensus 363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVkltD 439 (563)
T KOG1024|consen 363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVKLTD 439 (563)
T ss_pred ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEEecc
Confidence 77777777 678999988553 247778889999999999999999999999999999999 5779999999
Q ss_pred cCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHH
Q 011945 150 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i 228 (474)
=.+++.+-..+.+.- ..+......||+||.+.+..|+..+|||||||+||||+| |+.||...++.+....+
T Consensus 440 saLSRDLFP~DYhcL-----GDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl--- 511 (563)
T KOG1024|consen 440 SALSRDLFPGDYHCL-----GDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL--- 511 (563)
T ss_pred chhccccCccccccc-----CCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH---
Confidence 999987765544321 122234678999999999999999999999999999999 99999886654333222
Q ss_pred hhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 229 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
..... -.-+-+||+++..++..||...|++||+++++...|.++-...
T Consensus 512 kdGyR----laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 512 KDGYR----LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred hccce----ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 22211 1223579999999999999999999999999999999986554
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=3.5e-29 Score=231.06 Aligned_cols=208 Identities=28% Similarity=0.416 Sum_probs=178.9
Q ss_pred eeecCceEEEEEEEcCCCeEEEEEEeccCCCc---hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecCC-CCHH
Q 011945 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLG-PSLE 90 (474)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~g-~sL~ 90 (474)
||+|++|.||++.+..+++.++||+....... ..+.+|+++++.+.+ .++..+..+.......++++|+++ ++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH-PNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC-CCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 68999999999998878999999998776553 679999999999987 566666666667788999999995 9999
Q ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC-CCeEEEEecCCccccccCCCcccccccc
Q 011945 91 DLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLAKRYRDTATHQHIPYRE 169 (474)
Q Consensus 91 ~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~-~~~vkL~DFGla~~~~~~~~~~~~~~~~ 169 (474)
+++......+++..++.++.+++.+|.+||++|++|+||+|.||+++ . .+.++|+|||.+........ .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~---~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD---SDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe---CCCCcEEEecCCceEEccCCcc-------h
Confidence 99985545799999999999999999999999999999999999995 4 68999999999987654321 1
Q ss_pred CCCCccCccccccccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHH
Q 011945 170 NKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 248 (474)
Q Consensus 170 ~~~~~GT~~Y~APE~~~~~-~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 248 (474)
.....+...|++||.+... ..+.+.|+|+||+++++| ..+
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------~~~ 190 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------PEL 190 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------HHH
Confidence 1234678899999999887 788999999999999999 578
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHH
Q 011945 249 ASYFHYCRSLRFDDKPDYAYLKRL 272 (474)
Q Consensus 249 ~~li~~cl~~dp~~RPt~~~l~~~ 272 (474)
.+++..|+..+|++||++.++++.
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhC
Confidence 999999999999999998887653
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=5.4e-31 Score=258.34 Aligned_cols=262 Identities=25% Similarity=0.383 Sum_probs=200.5
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcC---CCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEE
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQ---TNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~ 79 (474)
|.+.+.|.++++||+|.|++||++.+.. ..+.||+|.+........+..|+++|..+.+..+|..+..+...++..+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ 111 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA 111 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence 4567889999999999999999999877 7889999998877777889999999999999999999999999999999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 80 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 80 lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
+||+|+ .....+++. .++...+..++..++.||.++|.+|||||||||.|||.+ ...+.-.|+|||+|.....
T Consensus 112 ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n--~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN--RRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred EEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc--cccCCceEEechhHHHHHh
Confidence 999999 455666654 578999999999999999999999999999999999997 5667779999999983211
Q ss_pred CC------C----c------cc---------------------cccccCCCCccCccccccccccCCC-CCchhhHHHHH
Q 011945 159 TA------T----H------QH---------------------IPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLG 200 (474)
Q Consensus 159 ~~------~----~------~~---------------------~~~~~~~~~~GT~~Y~APE~~~~~~-~s~ksDIwSlG 200 (474)
.. . + .. ..........||++|.|||++...+ ++.++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 10 0 0 00 0001123356999999999999765 79999999999
Q ss_pred HHHHHHHhCCCCCCCCCcCc--HHH-----------HHHHHhhc--c---------------ccch-HHH----------
Q 011945 201 YVLMYFLRGSLPWQGLKAGT--KKQ-----------KYEKISEK--K---------------VSTS-IEA---------- 239 (474)
Q Consensus 201 vil~elltG~~Pf~~~~~~~--~~~-----------~~~~i~~~--~---------------~~~~-~~~---------- 239 (474)
||++-++++.+||....+.. ..+ +....... . +... .+.
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 99999999999996432211 000 00000000 0 0000 011
Q ss_pred ---HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 240 ---LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 240 ---l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
..+.+|..+.+|+.+|++.||.+|.++++.+
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~np~kRitAEeAL 379 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELNPQKRITAEDAL 379 (418)
T ss_pred eccccccccHHHHHHHHHHccCChhhcccHHHHh
Confidence 1123456899999999999999999988764
No 404
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=7.4e-31 Score=249.04 Aligned_cols=255 Identities=20% Similarity=0.222 Sum_probs=195.9
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCchHHHHHHHHHHHhcCCCCCceeEEEeEe-----C
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVE-----G 75 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~-----~ 75 (474)
+..+|.-++.+|.|.- .|..+.|.-.++.||+|..... ...+...+|..++..+.|.++|..+..|... -
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 4567888899999998 8888999899999999965332 3345688999999999999888888776543 2
Q ss_pred CEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 76 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 76 ~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
...|+|||++..+|.+++. -.++-+++..|+.|+++|++|||+.||+||||||+||++ +.+..+||+|||+|+.
T Consensus 94 ~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchhhcc
Confidence 3569999999999999987 357889999999999999999999999999999999999 5889999999999985
Q ss_pred cccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhcc---
Q 011945 156 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--- 232 (474)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--- 232 (474)
.... . ..+.++.|..|.|||++.+..+.+.+||||+||++.||++|...|.+...-+...++.......
T Consensus 168 e~~~--~------~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 168 EDTD--F------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred cCcc--c------ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHH
Confidence 4432 1 1345688999999999999999999999999999999999999998743222111111100000
Q ss_pred -------------------ccchHHHHhcC------------CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011945 233 -------------------VSTSIEALCRG------------YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 277 (474)
Q Consensus 233 -------------------~~~~~~~l~~~------------~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 277 (474)
......++.++ -.....+++.+||..||++|.+++++ |++..
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~da---L~HPY 312 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDA---LRHPY 312 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHH---hcCCe
Confidence 00111111110 12457899999999999999996554 55544
No 405
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=6e-31 Score=269.21 Aligned_cols=264 Identities=17% Similarity=0.260 Sum_probs=211.3
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.++|+++.++|+|+||.||+++++.+++..|+|+++... ....++.|+-+++.++|++++.++..|-. .+..+++||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-~dklwicME 92 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-RDKLWICME 92 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-hcCcEEEEE
Confidence 468999999999999999999999999999999877653 34568899999999999988888766543 445699999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 162 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (474)
|| |++|++... ..+.+++.++..+....+.||+|||++|-+|||||-.|||++ +.+.+||.|||.+-.+.....
T Consensus 93 ycgggslQdiy~-~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDvklaDfgvsaqitati~- 167 (829)
T KOG0576|consen 93 YCGGGSLQDIYH-VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDVKLADFGVSAQITATIA- 167 (829)
T ss_pred ecCCCcccceee-ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCceeecccCchhhhhhhhh-
Confidence 99 778888765 567899999999999999999999999999999999999995 789999999999977654332
Q ss_pred cccccccCCCCccCcccccccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHH
Q 011945 163 QHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 239 (474)
Q Consensus 163 ~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (474)
..+.+.||+.|||||+.. .+.|...+|||++|++..|+-.-+.|..+.... +.+.-.....+..+..+
T Consensus 168 ------KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm---r~l~LmTkS~~qpp~lk 238 (829)
T KOG0576|consen 168 ------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM---RALFLMTKSGFQPPTLK 238 (829)
T ss_pred ------hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH---HHHHHhhccCCCCCccc
Confidence 236789999999999764 456999999999999999999888887664432 11111112222222222
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH-----------HHHHHHHHHcCCCC
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK-----------RLFRDLFIREGFQF 284 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~-----------~~L~~l~~~~~~~~ 284 (474)
-...+.+.|.+|++.||.++|.+||+++.++ .+..+++.+.+...
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~ 294 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPN 294 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCC
Confidence 3345788999999999999999999988764 34566777766544
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1.2e-27 Score=224.91 Aligned_cols=197 Identities=30% Similarity=0.449 Sum_probs=164.3
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
|.+.+.||.|++|.||+|.+..+++.|+||.+.... ....+..|++.++.+.+. ++..+..+.......++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~-~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHP-NIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCC-ChhhheeeeecCCceEEEEecc
Confidence 678899999999999999998889999999987654 345688899999999765 4444555556667888999998
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 -g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
+++|.+++......+++..++.++.+++.+|.+||+++++|+||+|.||+++ ..+.++|+|||++..+......
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---~~~~~~l~d~g~~~~~~~~~~~-- 154 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---MDGLVKLADFGLARFIHRDLAA-- 154 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeCceeeEecCcccc--
Confidence 5599999985433389999999999999999999999999999999999994 5689999999999877554210
Q ss_pred cccccCCCCccCccccccccc-cCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 011945 165 IPYRENKNLTGTARYASMNTH-LGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~-~~~~~s~ksDIwSlGvil~elltG~~Pf~~ 215 (474)
......++..|++||.+ ....++.++|||+||+++|+|++|+.||..
T Consensus 155 ----~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ----LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ----cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 11335678899999998 666788899999999999999999999965
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=5.5e-28 Score=220.30 Aligned_cols=167 Identities=17% Similarity=0.181 Sum_probs=128.4
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 87 ~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
|+|.+++...+..+++.+++.|+.||+.||.|||+++ ||+|||+ +.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeecccc------
Confidence 6899999866667999999999999999999999998 9999999 47788888 99997654321
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHH--HHhcCC
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE--ALCRGY 244 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~ 244 (474)
..||+.|||||++.+..++.++|||||||++|||++|+.||...... ...+..+.......... .....+
T Consensus 64 ------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (176)
T smart00750 64 ------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL--SAILEILLNGMPADDPRDRSNLESV 135 (176)
T ss_pred ------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--cHHHHHHHHHhccCCccccccHHHH
Confidence 26899999999999999999999999999999999999999764321 12222222111111000 001122
Q ss_pred cH--HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011945 245 PT--EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 245 p~--~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 278 (474)
+. ++.+++..||..+|++||++.++++.+..+..
T Consensus 136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 136 SAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 33 69999999999999999999999887766543
No 408
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=1.5e-28 Score=274.59 Aligned_cols=188 Identities=14% Similarity=0.170 Sum_probs=135.4
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeee----------------
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL---------------- 138 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~---------------- 138 (474)
...++++||+++.+|.+++......+++.+++.|+.||+.||.|||++|||||||||+||||+.
T Consensus 52 ~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~ 131 (793)
T PLN00181 52 DDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 131 (793)
T ss_pred cchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence 3567888999999999999855667999999999999999999999999999999999999952
Q ss_pred CCCCCeEEEEecCCccccccCCC--------cccccc-ccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 011945 139 GRRANQVYIIDFGLAKRYRDTAT--------HQHIPY-RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 209 (474)
Q Consensus 139 ~~~~~~vkL~DFGla~~~~~~~~--------~~~~~~-~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG 209 (474)
.+..+.+||+|||+++....... ....++ .......||+.|||||++.+..++.++|||||||+||||++|
T Consensus 132 ~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhC
Confidence 12344567777777764321100 000000 001124689999999999999999999999999999999999
Q ss_pred CCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 210 SLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 210 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
..||.... ..+..+....... ..... .++...++..||..+|.+||++.++++
T Consensus 212 ~~~~~~~~-----~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 212 VSSREEKS-----RTMSSLRHRVLPP---QILLN-WPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCchhhHH-----HHHHHHHHhhcCh---hhhhc-CHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 88875321 1122221111111 11111 345678999999999999999998753
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=8.3e-26 Score=227.77 Aligned_cols=180 Identities=19% Similarity=0.213 Sum_probs=136.8
Q ss_pred CccCCcEEEeeeeeecCceEEEEEEEcC-CCeEEEEEEeccCC-------CchHHHHHHHHHHHhcCCCCCceeEEEeEe
Q 011945 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKT-------KHPQLQYEAKLYKILQGGTGIPNLRWFGVE 74 (474)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~~vAvK~~~~~~-------~~~~l~~E~~il~~l~~~~~i~~l~~~~~~ 74 (474)
+.+.++|.+.+.||+|+||+||+|.+.. +++.||||++.... ....+.+|+++|+.|.|+++++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 4567899999999999999999999876 67888999764321 123589999999999998888766543
Q ss_pred CCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC-CCCcEEeeeCCCCCeEEEEecCC
Q 011945 75 GDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI-KPDNFLMGLGRRANQVYIIDFGL 152 (474)
Q Consensus 75 ~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDI-KP~NILl~~~~~~~~vkL~DFGl 152 (474)
...+|||||+ |++|.. +. ... ...++.|++.+|.|||++||+|||| ||+|||++ .++.+||+|||+
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~----~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDFGl 158 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR----PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDFQL 158 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC----ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEECcc
Confidence 3469999999 777752 21 111 1467899999999999999999999 99999994 567899999999
Q ss_pred ccccccCCCcccc-ccccCCCCccCccccccccccCCC------CCchhhHH
Q 011945 153 AKRYRDTATHQHI-PYRENKNLTGTARYASMNTHLGIE------QSRRDDLE 197 (474)
Q Consensus 153 a~~~~~~~~~~~~-~~~~~~~~~GT~~Y~APE~~~~~~------~s~ksDIw 197 (474)
|+.+........+ .+..-....+++.|+|||.+...+ .+...|-|
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9988765433222 122224678899999999987543 23446665
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=5e-24 Score=208.36 Aligned_cols=257 Identities=30% Similarity=0.405 Sum_probs=191.9
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
|.+.+.||.|+||.||++.+. ..+++|.+..... ...+.+|+.++..+.+++.+..+..+.......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 789999999999999999976 7889998765433 34588999999999988655555555566666788999
Q ss_pred cC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCC-eEEEEecCCccccccC
Q 011945 84 LL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRDT 159 (474)
Q Consensus 84 ~~-g~sL~~li~~~~--~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~-~vkL~DFGla~~~~~~ 159 (474)
++ +++|.+++.... ..+....+..++.|++.+|.|+|+.+++||||||+||+++ ..+ .++++|||++..+...
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~---~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD---RDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---CCCCeEEEeccCcceecCCC
Confidence 88 788887776433 2799999999999999999999999999999999999994 455 7999999999865544
Q ss_pred CCccccccccCCCCccCccccccccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcC-cHHHHHHHHhhccccc
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-TKKQKYEKISEKKVST 235 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~---~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~i~~~~~~~ 235 (474)
....... .......||..|++||.+.+ ..++...|+|++|++++++++|..||...... ........+.......
T Consensus 156 ~~~~~~~-~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 156 GSTSSIP-ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred Ccccccc-ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 3211100 12356789999999999998 57899999999999999999999998765431 1122222222222110
Q ss_pred hHHHHhcCC----cHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011945 236 SIEALCRGY----PTEFASYFHYCRSLRFDDKPDYAYLKRL 272 (474)
Q Consensus 236 ~~~~l~~~~----p~~l~~li~~cl~~dp~~RPt~~~l~~~ 272 (474)
......... ...+.+++..|+..+|..|.+.......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 011111111 2578999999999999999987665443
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=6.8e-25 Score=234.77 Aligned_cols=252 Identities=19% Similarity=0.245 Sum_probs=186.0
Q ss_pred EEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----CCch----HHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----TKHP----QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----~~~~----~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
.....+|.|++|.|+.+......+.++.|.+... .... .+..|+-+-..|.|.+++..+..+.........
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~- 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS- 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh-
Confidence 4567899999999998887766666666644321 1111 134455555567766666655444433333333
Q ss_pred EecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 82 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 82 ~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
||||..+|..++.. ...+...++..++.|++.||.|||+.||.||||||+|+++. ..+.+||+|||.+..+.....
T Consensus 400 mE~~~~Dlf~~~~~-~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 400 MEYCPYDLFSLVMS-NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhcccHHHHHHHhc-ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCcceeeccCcc
Confidence 99996699888873 34799999999999999999999999999999999999995 778999999999987765433
Q ss_pred ccccccccCCCCccCccccccccccCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCCCcCcHH-HHHHHHhhccccchHHH
Q 011945 162 HQHIPYRENKNLTGTARYASMNTHLGIEQSR-RDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVSTSIEA 239 (474)
Q Consensus 162 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~-ksDIwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~ 239 (474)
.. ......++|+..|+|||++.+.+|++ ..||||.|++++.|++|+.||......+.. .................
T Consensus 476 ~~---~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~ 552 (601)
T KOG0590|consen 476 KN---IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNR 552 (601)
T ss_pred hh---hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHH
Confidence 21 12346789999999999999999874 689999999999999999999765443322 11111122223333455
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011945 240 LCRGYPTEFASYFHYCRSLRFDDKPDYAYL 269 (474)
Q Consensus 240 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 269 (474)
+...+|.+.+.+|-+||+.+|.+|.++++|
T Consensus 553 ~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i 582 (601)
T KOG0590|consen 553 LLSLLPRETRIIIYRMLQLDPTKRITIEQI 582 (601)
T ss_pred HHHhchhhHHHHHHHHccCChhheecHHHH
Confidence 667789999999999999999999997766
No 412
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.8e-22 Score=220.70 Aligned_cols=255 Identities=23% Similarity=0.325 Sum_probs=184.9
Q ss_pred cCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhc--CCCCCceeEEEeEeCCEEEEEE
Q 011945 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~--~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
-+..|.|.+.||.|+||.||+|.... |+.||||+.+.....+ +..=.+++.+|+ --+.|..+.......+..+||+
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ 773 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS 773 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-eeehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence 36789999999999999999999755 9999999987655433 112223344444 1122223333334455668889
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeee----CCCCCeEEEEecCCccccc
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL----GRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~----~~~~~~vkL~DFGla~~~~ 157 (474)
+|. .|+|.++++ ..+.+++..+..++.||+.-++.||..+|||+||||+|+||.. +.+...++|+|||.+..+.
T Consensus 774 ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 774 EYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred eccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 988 899999998 6677999999999999999999999999999999999999964 2234569999999997554
Q ss_pred cCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 158 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 158 ~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
--.... ..+..++|-.+-.+|+..|.+|+...|.|.|..+++-||.|++-= ...+.. . .....+
T Consensus 853 lfp~~~-----~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q--~~~g~~----~-----~~~~~~ 916 (974)
T KOG1166|consen 853 LFPDGT-----KFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME--VKNGSS----W-----MVKTNF 916 (974)
T ss_pred EcCCCc-----EEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--hcCCcc----e-----eccccc
Confidence 322221 124568899999999999999999999999999999999996431 000000 0 000001
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
..++. -+-+.+|+..+|+.|-..=|...+|+..|++.|.+.
T Consensus 917 ~Ry~~--~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~ 957 (974)
T KOG1166|consen 917 PRYWK--RDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEH 957 (974)
T ss_pred hhhhh--HHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence 11111 133567888888877777788999999999888664
No 413
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89 E-value=1.1e-22 Score=197.31 Aligned_cols=231 Identities=23% Similarity=0.262 Sum_probs=148.4
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcC----------CCCCceeEEE-
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQG----------GTGIPNLRWF- 71 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~----------~~~i~~l~~~- 71 (474)
.+...+.||.|+|+.||.+++..+|+.+|||+...... .+++.+|.-....+.+ ...+.-++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 45678899999999999999999999999998654432 1234444433322211 0111111111
Q ss_pred -------eE---eCCE-----EEEEEecCCCCHHHHHHHc---CCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 011945 72 -------GV---EGDY-----NVLVIDLLGPSLEDLFNFC---SRK---LSLKTVLMLADQMINRVEFVHSKSFLHRDIK 130 (474)
Q Consensus 72 -------~~---~~~~-----~~lv~e~~g~sL~~li~~~---~~~---l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIK 130 (474)
.. .... .+++|+.+.++|.+++... ... +.....+.+..|++..+++||+.||||+|||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 11 1111 2677888899999987532 211 3344456777999999999999999999999
Q ss_pred CCcEEeeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccC--------CCCCchhhHHHHHHH
Q 011945 131 PDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG--------IEQSRRDDLESLGYV 202 (474)
Q Consensus 131 P~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--------~~~s~ksDIwSlGvi 202 (474)
|+||++ +.+|.++|+||+........... ...+..|.+||.... ..++.+.|.|+||++
T Consensus 173 ~~nfll---~~~G~v~Lg~F~~~~r~g~~~~~----------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ 239 (288)
T PF14531_consen 173 PENFLL---DQDGGVFLGDFSSLVRAGTRYRC----------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGIT 239 (288)
T ss_dssp GGGEEE----TTS-EEE--GGGEEETTEEEEG----------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHH
T ss_pred eeeEEE---cCCCCEEEcChHHHeecCceeec----------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHH
Confidence 999999 58899999999887654432210 134577999997643 247899999999999
Q ss_pred HHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCC
Q 011945 203 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDK 263 (474)
Q Consensus 203 l~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~R 263 (474)
+|.|++|.+||........... .-..|..+|+.++.||..+|+.+|++|
T Consensus 240 ly~lWC~~lPf~~~~~~~~~~~------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 240 LYSLWCGRLPFGLSSPEADPEW------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHSS-STCCCGGGSTSGG------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHccCCCCCCCccccccc------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999999986533211100 112466889999999999999999987
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=1.6e-22 Score=187.29 Aligned_cols=137 Identities=22% Similarity=0.226 Sum_probs=103.6
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----------chH-----------------HHHHHHHHHHhcCCC
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----------HPQ-----------------LQYEAKLYKILQGGT 63 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----------~~~-----------------l~~E~~il~~l~~~~ 63 (474)
.+.||+|+||.||+|.+. +|+.||||+++.... ... ...|++++..+.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 578999999999999986 899999998764321 011 234999999997543
Q ss_pred CCceeEEEeEeCCEEEEEEecCCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH-HHCCccccCCCCCcEEeeeCCC
Q 011945 64 GIPNLRWFGVEGDYNVLVIDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFV-HSKSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 64 ~i~~l~~~~~~~~~~~lv~e~~g~-sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yL-Hs~gIiHrDIKP~NILl~~~~~ 141 (474)
. .....+.... .+|||||+++ +|...+. ....+++..++.++.||+.+|.|| |+.||+||||||+|||++
T Consensus 81 v-~~p~~~~~~~--~~iVmE~i~g~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~---- 152 (190)
T cd05147 81 I-PCPEPILLKS--HVLVMEFIGDDGWAAPRL-KDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH---- 152 (190)
T ss_pred C-CCCcEEEecC--CEEEEEEeCCCCCcchhh-hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----
Confidence 2 2222222222 3899999954 4443322 245799999999999999999999 799999999999999994
Q ss_pred CCeEEEEecCCccccc
Q 011945 142 ANQVYIIDFGLAKRYR 157 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~ 157 (474)
++.++|+|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 3679999999997543
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.87 E-value=2.7e-22 Score=189.03 Aligned_cols=171 Identities=15% Similarity=0.218 Sum_probs=126.7
Q ss_pred CCccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCch-----------HHHHHHHHHHHhcCCCCCceeEE
Q 011945 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP-----------QLQYEAKLYKILQGGTGIPNLRW 70 (474)
Q Consensus 2 ~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~-----------~l~~E~~il~~l~~~~~i~~l~~ 70 (474)
+..+.++|++++.||.|+||.||++.+ ++..||||++....... .+.+|++.+.+|.|. +++.+..
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~-GI~~~~d 102 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE-GLASLND 102 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC-CCCcceE
Confidence 346789999999999999999999764 56789999986443221 157888899999754 5555544
Q ss_pred EeEe--------CCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC
Q 011945 71 FGVE--------GDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 71 ~~~~--------~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~ 141 (474)
+... ....+|+|||+ |.+|.++.. +++ ....+|+.+|..||..||+||||||+||+++ .
T Consensus 103 ~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~---~ 170 (232)
T PRK10359 103 FYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS---K 170 (232)
T ss_pred eeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe---C
Confidence 4332 23578999999 678887742 333 3456999999999999999999999999995 4
Q ss_pred CCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 011945 142 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFL 207 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ell 207 (474)
++ ++|+|||........... -...+...++.++|||+|||++..+.
T Consensus 171 ~g-i~liDfg~~~~~~e~~a~-------------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKAK-------------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhhH-------------------HHHHHHhHhcccccccceeEeehHHH
Confidence 55 999999998765332210 11334445677899999999987654
No 416
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.7e-21 Score=180.17 Aligned_cols=192 Identities=17% Similarity=0.111 Sum_probs=139.2
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCch------HHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP------QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~------~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
+.+...|++|+||+||++. ..+.+++.+-+....... .+.+|+++|++|.++++++.+..+ ...+++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~--~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVR--GGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEee--cCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 3467889999999999887 377788877655443311 378899999999988888888654 3358999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC-CCCcEEeeeCCCCCeEEEEecCCccccccCC
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI-KPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 160 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDI-KP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (474)
+|+ |.+|.+.+.. ....++.|++.+|.+||++||+|||| ||+|||++ .++.++|+|||+|.......
T Consensus 78 eyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred eeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCCceecCCcc
Confidence 997 7777654321 12457889999999999999999999 79999994 66789999999998554332
Q ss_pred Ccc-cccccc-----CCCCccCccccccccccCC-CCC-chhhHHHHHHHHHHHHhCCCCCCCCC
Q 011945 161 THQ-HIPYRE-----NKNLTGTARYASMNTHLGI-EQS-RRDDLESLGYVLMYFLRGSLPWQGLK 217 (474)
Q Consensus 161 ~~~-~~~~~~-----~~~~~GT~~Y~APE~~~~~-~~s-~ksDIwSlGvil~elltG~~Pf~~~~ 217 (474)
... .+-++. ......++.|++|+...-. ..+ ...++++.|+.+|.|+|+.+++.+..
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 100 000000 0012357788888865433 234 56788899999999999999886544
No 417
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.87 E-value=2.3e-22 Score=216.04 Aligned_cols=238 Identities=22% Similarity=0.344 Sum_probs=161.1
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
-.+|..++.|..|+||.||+++++.+.+.+|+|+-+.+. +.+. ++.... . .++|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l----ilRn--ilt~a~-n---------------pfvv---- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL----ILRN--ILTFAG-N---------------PFVV---- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch----hhhc--cccccC-C---------------ccee----
Confidence 467999999999999999999999999999996532111 1111 111111 1 1111
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcc--
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ-- 163 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~-- 163 (474)
++-..+++. -++++.. ++.+++|||+.||+|||+||+|.||+ .-|++|++|||+++.........
T Consensus 136 -gDc~tllk~-~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 136 -GDCATLLKN-IGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred -chhhhhccc-CCCCcch--------hhHHhHhhccCCeecCCCCCCcceee---ecccccccchhhhhhhhhhccchhh
Confidence 333344432 2234432 37899999999999999999999995 78999999999998643221111
Q ss_pred --ccc----cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchH
Q 011945 164 --HIP----YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 164 --~~~----~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
++. .-..+.++||+.|.|||++..+.|+..+|+|++|+|+||++-|..||.+...+. .+..+....... .
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee---lfg~visd~i~w-p 278 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---LFGQVISDDIEW-P 278 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH---HHhhhhhhhccc-c
Confidence 000 012356799999999999999999999999999999999999999999865533 333322222111 1
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccccc
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 294 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 294 (474)
+. ...++++.+++|.++|..+|.+|--.....++ ....+...+||..+-
T Consensus 279 E~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~ev-------k~h~ff~~LDw~~ll 327 (1205)
T KOG0606|consen 279 EE-DEALPPEAQDLIEQLLRQNPLCRLGTGGALEV-------KQHGFFQLLDWKSLL 327 (1205)
T ss_pred cc-CcCCCHHHHHHHHHHHHhChHhhcccchhhhh-------hhccceeecccchhh
Confidence 11 34578999999999999999999543222222 222445567777443
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=3.4e-21 Score=178.55 Aligned_cols=138 Identities=21% Similarity=0.269 Sum_probs=105.6
Q ss_pred EeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----------------------------chHHHHHHHHHHHhcCC
Q 011945 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------------------------HPQLQYEAKLYKILQGG 62 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------------------------~~~l~~E~~il~~l~~~ 62 (474)
+.+.||+|+||.||+|.+. +|+.||||+++.... ...+..|...+.++.+.
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999986 899999998765421 01135788899998865
Q ss_pred CCCceeEEEeEeCCEEEEEEecCCCC-HH-HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeC
Q 011945 63 TGIPNLRWFGVEGDYNVLVIDLLGPS-LE-DLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLG 139 (474)
Q Consensus 63 ~~i~~l~~~~~~~~~~~lv~e~~g~s-L~-~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~ 139 (474)
. +.....+.... .+|||||+++. +. ..+. ...++...+..++.|++.+|.+||+ +||+||||||+|||++
T Consensus 80 ~-i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-- 152 (190)
T cd05145 80 G-VPVPEPILLKK--NVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-- 152 (190)
T ss_pred C-CCCceEEEecC--CEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE--
Confidence 4 33222222222 48999999543 33 3333 3468889999999999999999999 9999999999999994
Q ss_pred CCCCeEEEEecCCcccccc
Q 011945 140 RRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 140 ~~~~~vkL~DFGla~~~~~ 158 (474)
++.++|+|||+|.....
T Consensus 153 --~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 --DGKPYIIDVSQAVELDH 169 (190)
T ss_pred --CCCEEEEEcccceecCC
Confidence 57899999999986543
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=2e-22 Score=207.38 Aligned_cols=251 Identities=19% Similarity=0.264 Sum_probs=191.8
Q ss_pred eeeecCceEEEEEEEc---CCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 14 KIGSGSFGEIYLGTNI---QTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
.+|.|.||.|+++... ..+.-+|+|+.+.... ......|..++..++.++.+..+.+.+......++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 3799999999987632 3466788887654432 1245668888888888888888887777777788888888
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 165 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (474)
|+.|...+. ....+.+..+..+...++.+++++|+.+|+|||+|++||++ +..|++++.|||+++...+...
T Consensus 81 gg~lft~l~-~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~---- 152 (612)
T KOG0603|consen 81 GGDLFTRLS-KEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKI---- 152 (612)
T ss_pred cchhhhccc-cCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhh----
Confidence 667666554 34568889999999999999999999999999999999999 5889999999999987765432
Q ss_pred ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCc
Q 011945 166 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 245 (474)
Q Consensus 166 ~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 245 (474)
.+||..|||||++. .....+|.||||++++||++|..||.+ +....|...+... +..+.
T Consensus 153 -------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~~~~Il~~~~~~-----p~~l~ 211 (612)
T KOG0603|consen 153 -------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DTMKRILKAELEM-----PRELS 211 (612)
T ss_pred -------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HHHHHHhhhccCC-----chhhh
Confidence 28999999999998 457789999999999999999999987 2233333323222 23445
Q ss_pred HHHHHHHHHHhcCCCCCCCCH--HHHHHHHHHHHHHcCCCCCCcccccccccccccc
Q 011945 246 TEFASYFHYCRSLRFDDKPDY--AYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQV 300 (474)
Q Consensus 246 ~~l~~li~~cl~~dp~~RPt~--~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~ 300 (474)
.+..+++..++..+|..|--. ..+.+..++ .+....+|+.+..++.++
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h-------~f~~~i~~~~l~~r~~~~ 261 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGAGPDGVDEIKQH-------EFFQSIDWNELEARSRPP 261 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhccCcchhHHHhcc-------chheeeeHhhHhhcCCCC
Confidence 778999999999999999654 334444443 345667899776655443
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=2.3e-20 Score=182.16 Aligned_cols=195 Identities=18% Similarity=0.224 Sum_probs=147.3
Q ss_pred CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC-CCeEEEEecCCc
Q 011945 75 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLA 153 (474)
Q Consensus 75 ~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~-~~~vkL~DFGla 153 (474)
+...|+||.-+..+|.+++. .+..+......|+.|+++|+.|||.+||.|||+|.+||||-.+++ ...+.|+|||++
T Consensus 315 ~~tlylvMkrY~~tLr~yl~--~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc 392 (598)
T KOG4158|consen 315 PKTLYLVMKRYRQTLREYLW--TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC 392 (598)
T ss_pred CceEEEehhcchhhHHHHHh--cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence 45679999999999999996 556888899999999999999999999999999999999976533 456789999988
Q ss_pred cccccCCCcccccccc-CCCCccCccccccccccCCC------CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcH-HHHH
Q 011945 154 KRYRDTATHQHIPYRE-NKNLTGTARYASMNTHLGIE------QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKY 225 (474)
Q Consensus 154 ~~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~~~~~~------~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~-~~~~ 225 (474)
---. ......||.. .....|....||||+....+ --.|+|.|+.|.+.||++....||........ ...|
T Consensus 393 LAd~--~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y 470 (598)
T KOG4158|consen 393 LADD--NHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY 470 (598)
T ss_pred eecc--ccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh
Confidence 5322 2223344432 23346888999999987543 13589999999999999999999987321110 0112
Q ss_pred HHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Q 011945 226 EKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 280 (474)
Q Consensus 226 ~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 280 (474)
+ ...++.+...+|+.+++++..+|+.||.+|++..-..+.|+-.+...
T Consensus 471 q-------e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~ 518 (598)
T KOG4158|consen 471 Q-------ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRM 518 (598)
T ss_pred h-------hhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHhcC
Confidence 1 12334566789999999999999999999999876666665544333
No 421
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.83 E-value=2.4e-21 Score=208.49 Aligned_cols=249 Identities=16% Similarity=0.148 Sum_probs=170.5
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC------chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
.|...+.||.+.|=.|.+|++ ..|. |+||++-.... ..+...|++ ...+++++.+++.. ..+.+...|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~-~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk-~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKD-REGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQK-VLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccC-CCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHH-HHHhhHHHHHH
Confidence 688899999999999999996 4554 99998755432 123344444 33344455554443 35566677888
Q ss_pred EecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCC
Q 011945 82 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 161 (474)
Q Consensus 82 ~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (474)
=.|...+|+|.+. ...-+...+.+.|+.||+.||..+|..||+|+|||.+||||+ .-+-+.|+||..-+..--+.+
T Consensus 100 RqyvkhnLyDRlS-TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVKHNLYDRLS-TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHhhhhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccCCccCCCC
Confidence 8888999999886 223377889999999999999999999999999999999996 556689999986653211111
Q ss_pred -ccccccccCCCCccCccccccccccCC----------C-CCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHH
Q 011945 162 -HQHIPYRENKNLTGTARYASMNTHLGI----------E-QSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 228 (474)
Q Consensus 162 -~~~~~~~~~~~~~GT~~Y~APE~~~~~----------~-~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i 228 (474)
...+.|... +..--..|+|||-+... . .+++-||||+||++.||++ |++||.- ...-.|..
T Consensus 176 NPadf~fFFD-TSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~- 249 (1431)
T KOG1240|consen 176 NPADFTFFFD-TSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRS- 249 (1431)
T ss_pred CcccceEEEe-cCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhc-
Confidence 111111111 11223479999987641 1 5788999999999999998 7888842 11111111
Q ss_pred hhccccchHHHHhcCC-cHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011945 229 SEKKVSTSIEALCRGY-PTEFASYFHYCRSLRFDDKPDYAYLKRLF 273 (474)
Q Consensus 229 ~~~~~~~~~~~l~~~~-p~~l~~li~~cl~~dp~~RPt~~~l~~~L 273 (474)
.. ....+.+...+ ...++.+|..|++.||++|-++++.++.-
T Consensus 250 --~~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 250 --GN-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred --cC-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 11 12222233332 24689999999999999999999887653
No 422
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.82 E-value=9.5e-21 Score=176.57 Aligned_cols=243 Identities=12% Similarity=0.152 Sum_probs=181.1
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
..++-+|.+...|+.|+|++. |..+++|+++.... ...|..|.-.|+.+.|+++++.+..+....+...|...+
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 446678889999999999974 45677887765432 345888888999999999888888776665554444444
Q ss_pred CCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEeeeCCCCCeEE--EEecCCccccccC
Q 011945 85 LGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVY--IIDFGLAKRYRDT 159 (474)
Q Consensus 85 ~g~sL~~li~~~~-~~l~~~~~~~i~~qi~~gL~yLHs~g--IiHrDIKP~NILl~~~~~~~~vk--L~DFGla~~~~~~ 159 (474)
..++|+.++.... -.++..++..++.+|+.|+.|||+.. |.---|....++|+ ++.+.+ .+|--++...
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid---edltarismad~kfsfqe--- 343 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID---EDLTARISMADTKFSFQE--- 343 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec---chhhhheecccceeeeec---
Confidence 4899999997433 23778899999999999999999953 33446788889994 444444 3443333211
Q ss_pred CCccccccccCCCCccCccccccccccCCCCC---chhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccch
Q 011945 160 ATHQHIPYRENKNLTGTARYASMNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s---~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
....-.+.||+||.+...+-+ +.+|+|||.++||||.|...||.+..+.+...++ .+...
T Consensus 344 -----------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki------alegl 406 (448)
T KOG0195|consen 344 -----------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI------ALEGL 406 (448)
T ss_pred -----------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh------hhccc
Confidence 123457899999999877643 5789999999999999999999987664332222 12233
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 276 (474)
...++.+++..+.+|+..|++.||.+||.++.|.-+|+++
T Consensus 407 rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 3455678899999999999999999999999999988876
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.81 E-value=1.5e-19 Score=173.23 Aligned_cols=142 Identities=20% Similarity=0.224 Sum_probs=108.6
Q ss_pred cEEEeeeeeecCceEEEEEE-EcCCCeEEEEEEeccCCC--------------------------chHHHHHHHHHHHhc
Q 011945 8 KFRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLENVKTK--------------------------HPQLQYEAKLYKILQ 60 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~-~~~~~~~vAvK~~~~~~~--------------------------~~~l~~E~~il~~l~ 60 (474)
-|.+.+.||+|+||.||+|. +..+|+.||||++..... ...+..|+.++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999 667999999998764321 012568999999997
Q ss_pred CCCCCceeEEEeEeCCEEEEEEecCCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCCCcEEeee
Q 011945 61 GGTGIPNLRWFGVEGDYNVLVIDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGL 138 (474)
Q Consensus 61 ~~~~i~~l~~~~~~~~~~~lv~e~~g~-sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~g-IiHrDIKP~NILl~~ 138 (474)
+ .++.....+... ..++||||+++ +|..+.. ....+....+..++.||+.+|.+||++| |+||||||+|||++
T Consensus 109 ~-~~i~~p~~~~~~--~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 E-AGVPVPKPIAWR--RNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred h-cCCCCCeeeEec--CceEEEEEecCCccccccc-ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 5 333332222222 24799999955 5555432 2345667778899999999999999999 99999999999994
Q ss_pred CCCCCeEEEEecCCccccc
Q 011945 139 GRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 139 ~~~~~~vkL~DFGla~~~~ 157 (474)
.+.++|+|||++....
T Consensus 184 ---~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 184 ---DGKVVIIDVSQSVELD 199 (237)
T ss_pred ---CCCEEEEEChhhhccC
Confidence 5789999999987543
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=1.2e-18 Score=163.50 Aligned_cols=136 Identities=16% Similarity=0.220 Sum_probs=101.2
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEeccC--CCchHHHHHHHHHHHhcC----CCCCceeEEEeEeCC---E-EEEE
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLQYEAKLYKILQG----GTGIPNLRWFGVEGD---Y-NVLV 81 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~--~~~~~l~~E~~il~~l~~----~~~i~~l~~~~~~~~---~-~~lv 81 (474)
.+.||+|+||.||. +..++.. +||++... .....+.+|+.+++.|.+ +++|+.++.+...+. + +.+|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 46899999999995 6667666 69987653 234568999999999953 445555554444432 3 4478
Q ss_pred EecCC---CCHHHHHHHcCCCCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCCCcEEeeeCC-CCCeEEEEecCCcc
Q 011945 82 IDLLG---PSLEDLFNFCSRKLSLKTVLMLADQMINRV-EFVHSKSFLHRDIKPDNFLMGLGR-RANQVYIIDFGLAK 154 (474)
Q Consensus 82 ~e~~g---~sL~~li~~~~~~l~~~~~~~i~~qi~~gL-~yLHs~gIiHrDIKP~NILl~~~~-~~~~vkL~DFGla~ 154 (474)
|||+| ++|.+++.. ..+++. ..++.|++.++ +|||+++||||||||+|||++..+ ....++|+||+.+.
T Consensus 84 ~e~~G~~~~tL~~~l~~--~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQ--CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred ecCCCCcchhHHHHHHc--ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 99965 899999974 346665 36688888888 999999999999999999997432 34589999955443
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=2.5e-18 Score=161.49 Aligned_cols=132 Identities=26% Similarity=0.397 Sum_probs=104.6
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC----------chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
++.||+|++|.||+|.+ .+..|+||+...... ...+.+|+.++..+.+.+ ++....+.......+++
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~p~~~~~~~~~~~lv 77 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAG-VNVPAVYFVDPENFIIV 77 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCeEEEEeCCCCEEE
Confidence 36799999999999986 778899997654321 124678999999998554 33333344445567899
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 82 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 82 ~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
|||+ |.+|.+++.... . ....++.+|+.+|.+||+.||+|+|++|.|||++ .+.++|+|||++..
T Consensus 78 ~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~ 143 (211)
T PRK14879 78 MEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence 9998 889999987322 2 8889999999999999999999999999999994 57899999999874
No 426
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.78 E-value=5.8e-20 Score=185.99 Aligned_cols=242 Identities=19% Similarity=0.219 Sum_probs=159.7
Q ss_pred cEEEeeeeeecCceEEEEEEEcCC---CeEEEEEEeccCC--CchHHHHHHHHHHHhcCCCCCceeE-----E--E----
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKT--KHPQLQYEAKLYKILQGGTGIPNLR-----W--F---- 71 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAvK~~~~~~--~~~~l~~E~~il~~l~~~~~i~~l~-----~--~---- 71 (474)
.+.+.+..+..+++.++......+ .+.++-|....+. ......+++..+....+++...... . +
T Consensus 245 s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~ 324 (516)
T KOG1033|consen 245 SSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNK 324 (516)
T ss_pred cccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccc
Confidence 344555566666666665543322 2333333332222 1122444555555555555443332 0 0
Q ss_pred eEeCCEEEEEEecC-CCCHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEE
Q 011945 72 GVEGDYNVLVIDLL-GPSLEDLFNF--CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 148 (474)
Q Consensus 72 ~~~~~~~~lv~e~~-g~sL~~li~~--~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~ 148 (474)
.....+.+|.|.+| ..+|++++.. .....++...+.++.|++.|++| +|.+|||+||.||++. .+.++||.
T Consensus 325 v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIg 398 (516)
T KOG1033|consen 325 VGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIG 398 (516)
T ss_pred cccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhh
Confidence 01234689999999 8899999962 23347888999999999999999 9999999999999995 56689999
Q ss_pred ecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHH
Q 011945 149 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEK 227 (474)
Q Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 227 (474)
|||+........+ ..-++......+||..||+||++.+..|+.++||||||+||+|++. -...|... ..+..
T Consensus 399 DFgl~ts~~~~~~-~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~------~t~~d 471 (516)
T KOG1033|consen 399 DFGLVTSQDKDET-VAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI------ATLTD 471 (516)
T ss_pred hhhheeecccCCc-ccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH------Hhhhh
Confidence 9999987665541 1111223455689999999999999999999999999999999997 33443221 11222
Q ss_pred HhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCH
Q 011945 228 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 266 (474)
Q Consensus 228 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 266 (474)
+....++ +.+..++|. -..|+.+++...|.+||++
T Consensus 472 ~r~g~ip---~~~~~d~p~-e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 472 IRDGIIP---PEFLQDYPE-EYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred hhcCCCC---hHHhhcCcH-HHHHHHHhcCCCcccCchH
Confidence 2222222 122334443 4689999999999999943
No 427
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=2.2e-18 Score=177.36 Aligned_cols=212 Identities=17% Similarity=0.227 Sum_probs=160.3
Q ss_pred HhcCCCCCceeEEEeEeCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCCCcEE
Q 011945 58 ILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF-LHRDIKPDNFL 135 (474)
Q Consensus 58 ~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gI-iHrDIKP~NIL 135 (474)
.+. |.++..+.+...++...+++-+|| .++|.|.+......+++.....++.+|+.||.|||.-.| .|+.|+..|++
T Consensus 3 ~l~-h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nCl 81 (484)
T KOG1023|consen 3 QLD-HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCL 81 (484)
T ss_pred ccc-hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccce
Confidence 345 445556666666678888899999 899999998777789999999999999999999999766 99999999999
Q ss_pred eeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCC-------CCchhhHHHHHHHHHHHHh
Q 011945 136 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-------QSRRDDLESLGYVLMYFLR 208 (474)
Q Consensus 136 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-------~s~ksDIwSlGvil~ellt 208 (474)
+ +....+||+|||+.......... .......-...|.|||.+.+.. .+.+.||||||++++|+++
T Consensus 82 v---d~~w~lklt~~Gl~~~~~~~~~~-----~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 82 V---DSRWVLKLTDFGLNSLLEETAEP-----EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred e---eeeEEEEechhhhcccccccccc-----cccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 9 58899999999998776431100 0011122456799999998742 3677999999999999999
Q ss_pred CCCCCCCCCcC-cHHHHHHHHhh---ccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 209 GSLPWQGLKAG-TKKQKYEKISE---KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 209 G~~Pf~~~~~~-~~~~~~~~i~~---~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
.+.||...... ...+.+..+.. ....+.+.... .+++++..++..||..+|++||+++.+...++.+...
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccCccccccccCChHHHHHHHHhcCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 99999863322 22333333333 12233333222 6677999999999999999999999999988888754
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.76 E-value=9.2e-18 Score=156.24 Aligned_cols=128 Identities=24% Similarity=0.368 Sum_probs=99.9
Q ss_pred eeeecCceEEEEEEEcCCCeEEEEEEeccCCC----------chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.||+|+||.||+|. .++..|++|+...... ...+.+|++++..+.+.+ +.....+.......+++||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAG-VNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEEEECCCCEEEEE
Confidence 48999999999998 4678899998543221 134668999999998653 3333334445556689999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 84 ~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
++ |++|.+++.... . .++.|++.+|.+||+.||+|+||+|.|||++ .+.++|+|||++...
T Consensus 78 ~~~g~~l~~~~~~~~--~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN--D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcH--H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcCC
Confidence 98 889988876321 1 8899999999999999999999999999994 678999999998753
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=1.3e-17 Score=155.47 Aligned_cols=136 Identities=21% Similarity=0.306 Sum_probs=103.8
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC------------------------chHHHHHHHHHHHhcCCC
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------------------------HPQLQYEAKLYKILQGGT 63 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------------------------~~~l~~E~~il~~l~~~~ 63 (474)
.|.+.+.||.|+||.||++.+ .+|+.||||++..... ......|..++..+.+..
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 488899999999999999987 4899999998654220 112567888888887542
Q ss_pred -CCceeEEEeEeCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC
Q 011945 64 -GIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 64 -~i~~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~ 141 (474)
.++... . ....+++|||+ |.+|.++.. ......++.+|+.++.++|+.||+||||||+||+++ .
T Consensus 95 i~v~~~~--~--~~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~---~ 160 (198)
T cd05144 95 FPVPKPI--D--WNRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD---D 160 (198)
T ss_pred CCCCcee--e--cCCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---C
Confidence 222222 2 23458999998 667765532 134567889999999999999999999999999994 6
Q ss_pred CCeEEEEecCCcccccc
Q 011945 142 ANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~~ 158 (474)
++.++|+|||++.....
T Consensus 161 ~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 161 DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcEEEEECCccccCCC
Confidence 78999999999976544
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.72 E-value=5.3e-17 Score=173.83 Aligned_cols=133 Identities=24% Similarity=0.422 Sum_probs=102.5
Q ss_pred CcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-C---------chHHHHHHHHHHHhcCCCCCceeEEEeEeCC
Q 011945 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-K---------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 76 (474)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~---------~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~ 76 (474)
..|...++||+|+||+||+|.+. +..+++|+...+. . ...+.+|+++++.+++++ +.....+.....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~p~~~~~~~~ 409 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAG-VPTPVIYDVDPE 409 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccC-CCeeEEEEEeCC
Confidence 34566889999999999999864 3344555321111 1 134788999999998655 444444555556
Q ss_pred EEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
..+++|||+ |++|.+++. ....++.|++.+|.|||+.||+||||||+|||+ .++.++|+|||+++.
T Consensus 410 ~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl----~~~~~~liDFGla~~ 476 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV----RDDRLYLIDFGLGKY 476 (535)
T ss_pred CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE----ECCcEEEEeCccccc
Confidence 678999999 889998875 356789999999999999999999999999999 356899999999975
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=2.7e-16 Score=144.81 Aligned_cols=135 Identities=24% Similarity=0.330 Sum_probs=95.1
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc----hH----------------------HHHHHHHHHHhcCCC-C
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQ----------------------LQYEAKLYKILQGGT-G 64 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~----------------------l~~E~~il~~l~~~~-~ 64 (474)
.+.||+|+||.||+|.+. +++.||||++...... .. ...|...+..+.+.. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999975 8999999987643211 01 135666666665432 2
Q ss_pred CceeEEEeEeCCEEEEEEecCCC-CHH-HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCC
Q 011945 65 IPNLRWFGVEGDYNVLVIDLLGP-SLE-DLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 65 i~~l~~~~~~~~~~~lv~e~~g~-sL~-~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~ 141 (474)
++....+ ...+++|||+.+ .+. ..+.... .. ..+..++.+++.++.++|. +||+|+||||+||+++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~---- 149 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD---- 149 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----
Confidence 3333222 235899999944 211 1121111 11 6788999999999999999 9999999999999994
Q ss_pred CCeEEEEecCCcccccc
Q 011945 142 ANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~~ 158 (474)
++.++|+|||.+.....
T Consensus 150 ~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CCcEEEEECcccccccC
Confidence 67899999999976544
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.64 E-value=2.2e-15 Score=132.17 Aligned_cols=132 Identities=20% Similarity=0.334 Sum_probs=106.4
Q ss_pred EeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCC-CCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGG-TGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~-~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
+++.||.|.++.||++... +..++||..........+..|+.+++.+.+. ..++.+..+.......+++||++ |..
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 4678999999999999963 3789999876544345789999999999876 55666666666667789999998 444
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 89 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 89 L~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~---gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
+..+ +......++.+++.+|.+||.. +++|+||+|+|||++ ..+.++|+|||++..
T Consensus 80 ~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~---~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD---DGKILGIIDWEYAGY 138 (155)
T ss_pred cccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---CCcEEEEEecccccC
Confidence 4432 5567778899999999999984 799999999999995 468899999999863
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.64 E-value=4.9e-15 Score=142.19 Aligned_cols=132 Identities=17% Similarity=0.215 Sum_probs=96.7
Q ss_pred eeee-ecCceEEEEEEEcCCCeEEEEEEeccC---------------CCchHHHHHHHHHHHhcCCCC-CceeEEEeE-e
Q 011945 13 RKIG-SGSFGEIYLGTNIQTNEEVAIKLENVK---------------TKHPQLQYEAKLYKILQGGTG-IPNLRWFGV-E 74 (474)
Q Consensus 13 ~~LG-~G~fG~Vy~a~~~~~~~~vAvK~~~~~---------------~~~~~l~~E~~il~~l~~~~~-i~~l~~~~~-~ 74 (474)
..|| .||.|+||.+.. .+..++||.+... .....+.+|+.++..|.+..+ ++....+.. .
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 899999999985 4778999976431 112357889999999986543 333333322 2
Q ss_pred CCE---EEEEEecC-C-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEe
Q 011945 75 GDY---NVLVIDLL-G-PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 149 (474)
Q Consensus 75 ~~~---~~lv~e~~-g-~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~D 149 (474)
... .++|||++ | .+|.+++.. ..++... +.||+.+|.+||++||+||||||+|||++ .++.++|+|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~---~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE--APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD---PDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc--CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc---CCCCEEEEE
Confidence 222 25899988 3 589988863 3455543 57899999999999999999999999995 556899999
Q ss_pred cCCccc
Q 011945 150 FGLAKR 155 (474)
Q Consensus 150 FGla~~ 155 (474)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 999864
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=2.5e-17 Score=176.73 Aligned_cols=253 Identities=23% Similarity=0.297 Sum_probs=188.8
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCC-CeEEEEEEeccCC-C---chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-NEEVAIKLENVKT-K---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~~vAvK~~~~~~-~---~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
...|.+.+.||+|+|+.|-+.....+ ...+|+|.+.... . ......|..+-+.+..|.++..+........+.++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 35689999999999999999886433 4456777655442 1 22344577777778767777777777778888899
Q ss_pred EEecC-CCCHHHHH-HHcCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCcEEeeeCCCCC-eEEEEecCCcccc
Q 011945 81 VIDLL-GPSLEDLF-NFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRY 156 (474)
Q Consensus 81 v~e~~-g~sL~~li-~~~~~~l~~~~~~~i~~qi~~gL~yLH-s~gIiHrDIKP~NILl~~~~~~~-~vkL~DFGla~~~ 156 (474)
.+++. |+++.+.+ .......+...+-.++.|+..+|.|+| ..++.||||||+|.+++ ..+ .+++.|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~---~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD---ESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc---cCCCcccCCCchhhccc
Confidence 99988 77887777 322225777888999999999999999 99999999999999995 556 8999999999988
Q ss_pred cc-CCCccccccccCCCCcc-CccccccccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccc
Q 011945 157 RD-TATHQHIPYRENKNLTG-TARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233 (474)
Q Consensus 157 ~~-~~~~~~~~~~~~~~~~G-T~~Y~APE~~~~~~-~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (474)
.. ..... .....+| ++.|+|||.+.+.. .....|+||.|+++.-+++|..||....... ..+......+.
T Consensus 176 ~~~~g~~~-----~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~--~~~~~~~~~~~ 248 (601)
T KOG0590|consen 176 RNKNGAER-----SLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD--GRYSSWKSNKG 248 (601)
T ss_pred cccCCcce-----eeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc--ccceeeccccc
Confidence 77 32211 1234567 99999999999854 5788999999999999999999997643322 12222222211
Q ss_pred cchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011945 234 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 269 (474)
Q Consensus 234 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 269 (474)
. .....+..+.....+++..++..+|..|.+.+++
T Consensus 249 ~-~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~ 283 (601)
T KOG0590|consen 249 R-FTQLPWNSISDQAHDLLHKILKENPSNRLSIEEL 283 (601)
T ss_pred c-cccCccccCChhhhhcccccccCCchhccccccc
Confidence 1 0122346678889999999999999999996655
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=3.2e-15 Score=154.33 Aligned_cols=254 Identities=17% Similarity=0.167 Sum_probs=190.8
Q ss_pred cCCcEEEeeeeee--cCceEEEEEEE--cCCCeEEEEEEeccCC----CchHHHHHHHHHHHhcCCCCCceeEEEeEeCC
Q 011945 5 VGNKFRLGRKIGS--GSFGEIYLGTN--IQTNEEVAIKLENVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 76 (474)
Q Consensus 5 i~~~y~i~~~LG~--G~fG~Vy~a~~--~~~~~~vAvK~~~~~~----~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~ 76 (474)
+.+.|-+.+.+|. |.+|.||.+.. ..++..+|+|.-+... ....-.+|..-.+.+..+.+............
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~ 191 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG 191 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC
Confidence 3456778889999 99999999987 7889999999633221 12223456666666666666666555667788
Q ss_pred EEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHH----HHHHHHHCCccccCCCCCcEEeeeCCCC-CeEEEEecC
Q 011945 77 YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN----RVEFVHSKSFLHRDIKPDNFLMGLGRRA-NQVYIIDFG 151 (474)
Q Consensus 77 ~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~----gL~yLHs~gIiHrDIKP~NILl~~~~~~-~~vkL~DFG 151 (474)
..++..|+|+.+|..+......-++...++.++.+... ||.++|+.+|+|-|+||+||++. .+ ..++++|||
T Consensus 192 ~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~---~~~~s~~~~df~ 268 (524)
T KOG0601|consen 192 ILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT---SDWTSCKLTDFG 268 (524)
T ss_pred cceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc---cccceeecCCcc
Confidence 89999999999999998766666889999999999999 99999999999999999999995 45 789999999
Q ss_pred CccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhc
Q 011945 152 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 231 (474)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~ 231 (474)
+...+.+...... +...+...|...|++||...+ -++..+|||+||.++.+..++..++..-..... .+.
T Consensus 269 ~v~~i~~~~~~~~--~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W-------~~~ 338 (524)
T KOG0601|consen 269 LVSKISDGNFSSV--FKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSW-------SQL 338 (524)
T ss_pred eeEEccCCccccc--eeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCc-------ccc
Confidence 9998877653221 112233467889999999876 578899999999999999998776644211110 000
Q ss_pred cccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011945 232 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 271 (474)
Q Consensus 232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 271 (474)
.......++|.....++...+..|+..++-.|++.+.+..
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1111234566777788888999999999999988776544
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.53 E-value=5.3e-13 Score=139.00 Aligned_cols=137 Identities=20% Similarity=0.306 Sum_probs=96.0
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCCch-------------------------------------------HH
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP-------------------------------------------QL 49 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~-------------------------------------------~l 49 (474)
+.||.|++|.||+|+. .+|+.||||+..... .+ ++
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i-~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGI-EKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCc-HHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 5699999999999986 589999999865431 11 13
Q ss_pred HHHHHHHHHhc----CCCCCceeEEEeEeCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHH-HHHHHHHCC
Q 011945 50 QYEAKLYKILQ----GGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMIN-RVEFVHSKS 123 (474)
Q Consensus 50 ~~E~~il~~l~----~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~-gL~yLHs~g 123 (474)
.+|...+.++. +.+.+.....+.......+|||||+ |.+|.++.......++ ...++.+++. .+..+|..|
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCC
Confidence 34444444443 3344443344444344569999999 8888887653222232 3456666655 478899999
Q ss_pred ccccCCCCCcEEeeeCCCCCeEEEEecCCccccc
Q 011945 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 157 (474)
Q Consensus 124 IiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (474)
++|+|+||.||++. .++.++|+|||++..+.
T Consensus 278 ~~H~D~hPgNilv~---~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVL---KDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEEC---CCCcEEEEeCCCeeECC
Confidence 99999999999994 67899999999997654
No 437
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.45 E-value=5.9e-13 Score=120.25 Aligned_cols=126 Identities=21% Similarity=0.289 Sum_probs=96.0
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCCH
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSL 89 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL 89 (474)
++.|+.|.++.||++.. .+..|+||+..... ....+..|+.+++.+.+...++.+..+... ..+++||++ |.++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEecCCCcc
Confidence 46789999999999985 47889999875443 234578999999999876667776655432 347899998 5555
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-----cccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 90 EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF-----LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 90 ~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gI-----iHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
.+. . .....++.+++.+|..||..++ +|+|++|.|||++ .+.++|+|||.+.
T Consensus 79 ~~~------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTE------D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAG 135 (170)
T ss_pred ccc------c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEeccccc
Confidence 432 0 1123457899999999999885 9999999999994 4679999999885
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.44 E-value=7.9e-12 Score=132.10 Aligned_cols=143 Identities=17% Similarity=0.271 Sum_probs=92.9
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC------------------------------------ch----
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------------------------------------HP---- 47 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------------------------------------~~---- 47 (474)
.|+. +.||+|++|.||+|+.+.+|+.||||++..... ..
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4665 789999999999999877799999998764310 00
Q ss_pred --HHHHHHHHHHHhc----CCCCCceeEEEeEeCCEEEEEEecC-CCCHHHHHHHcCCC-----CCHHHHHHHHHHHHHH
Q 011945 48 --QLQYEAKLYKILQ----GGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRK-----LSLKTVLMLADQMINR 115 (474)
Q Consensus 48 --~l~~E~~il~~l~----~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~~~-----l~~~~~~~i~~qi~~g 115 (474)
++.+|...+.++. +.+.+..-..|.......+|||||+ |..|.++....... +....+..++.||
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi--- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV--- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH---
Confidence 1344444444443 3333333334444455679999999 77887753211222 3333334444444
Q ss_pred HHHHHHCCccccCCCCCcEEeeeC-CCCCeEEEEecCCcccccc
Q 011945 116 VEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 116 L~yLHs~gIiHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~ 158 (474)
+..|++|+|+||.||+++.+ ...+.++++|||++..+..
T Consensus 277 ----f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ----FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ----HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 46999999999999999622 1223899999999976643
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.43 E-value=1.2e-12 Score=121.04 Aligned_cols=137 Identities=18% Similarity=0.206 Sum_probs=98.5
Q ss_pred eeeeeecCceEEEEEEEcC------CCeEEEEEEeccCC-----------------------C-chH----HHHHHHHHH
Q 011945 12 GRKIGSGSFGEIYLGTNIQ------TNEEVAIKLENVKT-----------------------K-HPQ----LQYEAKLYK 57 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~------~~~~vAvK~~~~~~-----------------------~-~~~----l~~E~~il~ 57 (474)
...||.|--+.||.|.... .+..+|||+.+... . ... ..+|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998643 35799999743210 0 011 237999999
Q ss_pred HhcCC-CCCceeEEEeEeCCEEEEEEecCCCC-H-HHHHHHcCCCCCHHHHHHHHHHHHHHHHHH-HHCCccccCCCCCc
Q 011945 58 ILQGG-TGIPNLRWFGVEGDYNVLVIDLLGPS-L-EDLFNFCSRKLSLKTVLMLADQMINRVEFV-HSKSFLHRDIKPDN 133 (474)
Q Consensus 58 ~l~~~-~~i~~l~~~~~~~~~~~lv~e~~g~s-L-~~li~~~~~~l~~~~~~~i~~qi~~gL~yL-Hs~gIiHrDIKP~N 133 (474)
+|... -.+|....+ ...+|||||++++ + ...++ ...++...+..+..+++.+|..| |..||||+||++.|
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk--d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK--DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh--ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 98743 334444433 4468999999763 2 11222 22356667788899999999999 89999999999999
Q ss_pred EEeeeCCCCCeEEEEecCCcccccc
Q 011945 134 FLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 134 ILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
||+. ++.++|+|||.+.....
T Consensus 156 IL~~----~~~v~iIDF~qav~~~h 176 (197)
T cd05146 156 MLWH----DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred EEEE----CCcEEEEECCCceeCCC
Confidence 9994 46799999999876543
No 440
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.31 E-value=1.9e-11 Score=109.34 Aligned_cols=142 Identities=19% Similarity=0.255 Sum_probs=107.5
Q ss_pred EeeeeeecCceEEEEEEEcCCCeEEEEEEe-ccCCCc---------hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLE-NVKTKH---------PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~-~~~~~~---------~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.+..|-+|+-+.|+++. ..|+.++||.- .+.-.+ ....+|++++.++..- +|+.-..+..+.....|
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEecCCCeE
Confidence 67788999999999998 57889899952 222222 3467799999988743 55555555666666789
Q ss_pred EEecCCC--CHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 81 VIDLLGP--SLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 81 v~e~~g~--sL~~li~~~~~~-l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
+|||..+ ++.+++...-.. ........++.+|-..|.-||..+|||+||..+||++..++....+.|+|||++..
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9999966 888888644333 33333378888899999999999999999999999997655566679999999864
No 441
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=2.5e-11 Score=109.01 Aligned_cols=128 Identities=24% Similarity=0.398 Sum_probs=95.9
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccC-CCch---------HHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEE
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHP---------QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~---------~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~ 82 (474)
..|++|+-+.||.+.+ -|..+++|.-..+ -..+ ...+|.+++.++.. .+|+.-..|..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~-~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKARE-AGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCeEEEEcCCCCEEEE
Confidence 4578999999999965 4556888853222 2222 35679999998874 46666666777788789999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 83 e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
||. |..|.+++... . ..++..+=.-+.-||..||||+||.++||+++ .+.++++||||+..
T Consensus 79 e~I~G~~lkd~l~~~----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~ 140 (204)
T COG3642 79 EYIEGELLKDALEEA----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEF 140 (204)
T ss_pred EEeCChhHHHHHHhc----c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCcccc
Confidence 999 66677787733 2 45566666667889999999999999999994 45599999999963
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.25 E-value=2e-12 Score=140.26 Aligned_cols=274 Identities=18% Similarity=0.165 Sum_probs=185.8
Q ss_pred CCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCC-----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
.+.+.+++-+-+|.++.++.+.-..++...++|+...... .+....+-.++.. -+.+.+.....-.......+|
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~-p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILIT-PRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCcccc-CCCCceecccCCCCCCCCcch
Confidence 4567888899999999999998767776666664322111 1111111111110 011111111111345566789
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
+|+|+ +++|...+.. ....+.+-+...+..+..+++|||+..++|+|++|.|+|+ ...+..++.|||.......-
T Consensus 882 ~~~~~~~~~~~Skl~~-~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~---~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHN-SGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI---AYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hhHHhccCCchhhhhc-CCCcccccccchhHHHHhhhhccccchhhcccccccchhh---cccCCcccCccccccccccc
Confidence 99988 7788888773 3357777788888899999999999999999999999999 47889999999844322110
Q ss_pred ---CCc------------------ccc---ccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 011945 160 ---ATH------------------QHI---PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215 (474)
Q Consensus 160 ---~~~------------------~~~---~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~ 215 (474)
... ... .-+......||+.|.+||...+......+|+|++|++++|.++|..||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 000 000 11224456899999999999999999999999999999999999999977
Q ss_pred CCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccccccccc
Q 011945 216 LKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 295 (474)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 295 (474)
... .+.++.+.......+ .-....+.+.++++...+..++.+|-.+.-- ....+..+....+|+.+..
T Consensus 1038 ~tp---q~~f~ni~~~~~~~p--~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~-------~e~k~~~~~~~~~~~~l~~ 1105 (1205)
T KOG0606|consen 1038 ETP---QQIFENILNRDIPWP--EGPEEGSYEAQDLINRLLTEEPTQRLGAKGA-------AEVKGHPFFQDVDWENLAL 1105 (1205)
T ss_pred cch---hhhhhccccCCCCCC--CCccccChhhhhhhhhhhccCchhccCcccc-------cccccCCccCCCCcccccc
Confidence 443 444455444433221 2223457889999999999999999875422 1234567778889998765
Q ss_pred c
Q 011945 296 Q 296 (474)
Q Consensus 296 ~ 296 (474)
+
T Consensus 1106 q 1106 (1205)
T KOG0606|consen 1106 Q 1106 (1205)
T ss_pred c
Confidence 4
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=8e-12 Score=129.37 Aligned_cols=240 Identities=19% Similarity=0.125 Sum_probs=165.8
Q ss_pred CCcEEEeeeeeecCceEEEEEEEc-CCCeEEEEEEeccCCC----chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEE
Q 011945 6 GNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLENVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~~----~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~l 80 (474)
..+|.++..||.|.|+.|+.+... .++..|++|-...... ...-..|+.+...+..+.++..+..-.......++
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 457889999999999999998754 5778899995433221 11235577777777656555554333333444458
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccC
Q 011945 81 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 81 v~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (474)
-.||| ++++...+ .....+++...+.+..|++.++.++|++.++|+|+||+||++.. +.+..++.|||+++.+.-.
T Consensus 344 p~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~--~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISN--DGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred chhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeecc--chhhhhcccccccccccee
Confidence 88999 66555444 35567899999999999999999999999999999999999962 2277899999998743221
Q ss_pred CCccccccccCCCCccCcccc--ccccccCCCCCchhhHHHHHHHHHHHHhCCC-CCCCCCcCcHHHHHHHHhhccccch
Q 011945 160 ATHQHIPYRENKNLTGTARYA--SMNTHLGIEQSRRDDLESLGYVLMYFLRGSL-PWQGLKAGTKKQKYEKISEKKVSTS 236 (474)
Q Consensus 160 ~~~~~~~~~~~~~~~GT~~Y~--APE~~~~~~~s~ksDIwSlGvil~elltG~~-Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (474)
. ..+.+..+++ +++......+..+.|++|||..+.+.+++.. ++.+... ..+... .
T Consensus 421 ~----------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~-------~~i~~~----~ 479 (524)
T KOG0601|consen 421 S----------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS-------LTIRSG----D 479 (524)
T ss_pred c----------ccccccccccccchhhccccccccccccccccccccccccCcccCcccccc-------eeeecc----c
Confidence 1 1123334444 5556666778999999999999999999863 4433211 111111 1
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
.+ ...+...++..+.+.+...++..||.+.++.
T Consensus 480 ~p-~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~ 512 (524)
T KOG0601|consen 480 TP-NLPGLKLQLQVLLKVMINPDRKRRPSAVELS 512 (524)
T ss_pred cc-CCCchHHhhhhhhhhhcCCccccchhhhhhc
Confidence 11 1233447888899999999999999876654
No 444
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.15 E-value=4.7e-10 Score=117.58 Aligned_cols=182 Identities=17% Similarity=0.170 Sum_probs=131.6
Q ss_pred EEEeeeeeecCceEEE-EEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 9 FRLGRKIGSGSFGEIY-LGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy-~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
|.| ...+-++.+ || .|..+.++.+|.|...+.... .....+-++-|+.|+|++++.++..+..++ ..|||.|-+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~-~~ylvTErV 91 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG-TLYLVTERV 91 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC-ceEEEeecc
Confidence 555 444555554 45 466678899999998776655 345677888899999888777776665554 779999987
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccc
Q 011945 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 164 (474)
Q Consensus 86 g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLH-s~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (474)
.+ |..+++. +....+...+.||+.||.||| +++++|++|.-+.|+| +..|..||++|-++.........
T Consensus 92 ~P-l~~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~~-- 161 (690)
T KOG1243|consen 92 RP-LETVLKE----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNAP-- 161 (690)
T ss_pred cc-HHHHHHH----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCcc--
Confidence 53 6666663 346778888999999999998 5789999999999999 58899999999988654432210
Q ss_pred cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCC
Q 011945 165 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGS 210 (474)
Q Consensus 165 ~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~ 210 (474)
.....--..|..|+.+.... -..|.|-|||+++|++.|.
T Consensus 162 -----~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 162 -----AKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred -----cccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 01112223455666544322 3469999999999999993
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.13 E-value=3.7e-10 Score=106.25 Aligned_cols=138 Identities=20% Similarity=0.270 Sum_probs=99.4
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCC---CchHHHHHHHHHHHhcCCCC-CceeEEEeEeC---CEEEEEEecC
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLQYEAKLYKILQGGTG-IPNLRWFGVEG---DYNVLVIDLL 85 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~-i~~l~~~~~~~---~~~~lv~e~~ 85 (474)
+.|+.|.++.||++... +|+.++||+..... ....+..|.++++.+.+... ++.+..+.... ...+++|+++
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 67899999999999863 36889999876543 24578999999999986432 55555555443 2568999998
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------------
Q 011945 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS------------------------------------------- 121 (474)
Q Consensus 86 -g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs------------------------------------------- 121 (474)
|.+|.+.+. ...++......++.+++..|.+||+
T Consensus 83 ~G~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 83 DGRVLRDRLL--RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CCEecCCCCC--CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 555655432 1346667777777777777777773
Q ss_pred -------------CCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 122 -------------KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 122 -------------~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
..++|+|+.|.|||++.+ ..+.+.|+||+.+.
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~ 205 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccc
Confidence 236899999999999521 14668999999875
No 446
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.07 E-value=7.7e-09 Score=100.69 Aligned_cols=132 Identities=18% Similarity=0.117 Sum_probs=93.3
Q ss_pred eEEEEEEEcCCCeEEEEEEeccCCC-----------c--hHHHHHHHHHHHhcCCC-CCceeEEEeEe-----CCEEEEE
Q 011945 21 GEIYLGTNIQTNEEVAIKLENVKTK-----------H--PQLQYEAKLYKILQGGT-GIPNLRWFGVE-----GDYNVLV 81 (474)
Q Consensus 21 G~Vy~a~~~~~~~~vAvK~~~~~~~-----------~--~~l~~E~~il~~l~~~~-~i~~l~~~~~~-----~~~~~lv 81 (474)
..|+++. -.|+.|.||....... . ....+|...+.+|.... .++....++.. ....+||
T Consensus 36 rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 36 RRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred ceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 3455654 4677899996533221 1 13779999998885321 12222333332 2346899
Q ss_pred EecCCC--CHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeC----CCCCeEEEEecCCcc
Q 011945 82 IDLLGP--SLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG----RRANQVYIIDFGLAK 154 (474)
Q Consensus 82 ~e~~g~--sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~----~~~~~vkL~DFGla~ 154 (474)
+|++++ +|.+++... ....+......++.+|+..+.-||..||+|+|+++.|||+..+ +....+.|+||+.+.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 998855 799998632 3456677888999999999999999999999999999999631 235789999999885
No 447
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.05 E-value=3.9e-09 Score=105.21 Aligned_cols=255 Identities=12% Similarity=0.186 Sum_probs=157.3
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCce-eEE-----Ee-EeCCEEEEE
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPN-LRW-----FG-VEGDYNVLV 81 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~-l~~-----~~-~~~~~~~lv 81 (474)
....+-||+|+-+.+|-.-. -+ ..+.|+.....-..+ ..-+..|...-.++.+.. +.| ++ ..+....++
T Consensus 13 i~~gr~LgqGgea~ly~l~e--~~-d~VAKIYh~Pppa~~-aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGE--VR-DQVAKIYHAPPPAAQ-AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred cCCCccccCCccceeeecch--hh-chhheeecCCCchHH-HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 34567899999999997642 12 234576544322111 122223333333333322 211 12 234446677
Q ss_pred EecCCC--CHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 82 IDLLGP--SLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 82 ~e~~g~--sL~~li~~~-----~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
|....+ .+..++.-. -..+.|..+++.+..|+.+.+.||..|.+-+|+.++|||++ ++..|.|.|=..-.
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEccccee
Confidence 777622 333333211 12378999999999999999999999999999999999996 77888888843322
Q ss_pred ccccCCCccccccccCCCCccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCcCc----HHH-
Q 011945 155 RYRDTATHQHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRG-SLPWQGLKAGT----KKQ- 223 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~ksDIwSlGvil~elltG-~~Pf~~~~~~~----~~~- 223 (474)
...+... ...-+|...|.+||.-. +.+-+...|.|.||++++++|.| ++||.+..... ..+
T Consensus 166 i~~ng~~--------~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~ 237 (637)
T COG4248 166 INANGTL--------HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET 237 (637)
T ss_pred eccCCce--------EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh
Confidence 2211111 12347899999999754 44567889999999999999996 99998753211 111
Q ss_pred HHH--------HHhhccccchHHHHhcCCcHHHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHHH
Q 011945 224 KYE--------KISEKKVSTSIEALCRGYPTEFASYFHYCRSL--RFDDKPDYAYLKRLFRDLFI 278 (474)
Q Consensus 224 ~~~--------~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~--dp~~RPt~~~l~~~L~~l~~ 278 (474)
.+. +-.......+...-+.-+|+.+..++.+|+.. .+.-||+++.-...|..+-.
T Consensus 238 ~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 238 DIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred hhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 010 00011112222222345689999999999964 36689999876666665543
No 448
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=1.5e-09 Score=104.86 Aligned_cols=173 Identities=12% Similarity=0.142 Sum_probs=115.1
Q ss_pred EEEEEEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCCCCcEEeeeCCCCCeEEEEec
Q 011945 77 YNVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~---~~~~l~~~~~~~i~~qi~~gL~yLHs~--gIiHrDIKP~NILl~~~~~~~~vkL~DF 150 (474)
..+++.||+ -++|.+++++ +...+..+...+|+.||+.||.|||+. -|+|+++..+-|++. .++.+||.
T Consensus 146 rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig-- 220 (458)
T KOG1266|consen 146 RVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIG-- 220 (458)
T ss_pred ceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEec--
Confidence 456777777 8899998863 455688999999999999999999986 599999999999994 66766653
Q ss_pred CCccccccCCCccc---cccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCC-CCCcCcHHHHHH
Q 011945 151 GLAKRYRDTATHQH---IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ-GLKAGTKKQKYE 226 (474)
Q Consensus 151 Gla~~~~~~~~~~~---~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~-~~~~~~~~~~~~ 226 (474)
....- ..+.. ..-.+...-.+-+.|.+||.=.....+..+|||+||.+..||..+..--. ........+.+.
T Consensus 221 -~~ap~---s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia 296 (458)
T KOG1266|consen 221 -SVAPD---STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIA 296 (458)
T ss_pred -ccCcc---ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhh
Confidence 22110 01100 00112223456788999998666667789999999999999988765321 111111111111
Q ss_pred HHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011945 227 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 269 (474)
Q Consensus 227 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 269 (474)
...+ .+. ..--+.++..|++-.|..||++.++
T Consensus 297 ---~~i~-----~le---n~lqr~~i~kcl~~eP~~rp~ar~l 328 (458)
T KOG1266|consen 297 ---NVII-----GLE---NGLQRGSITKCLEGEPNGRPDARLL 328 (458)
T ss_pred ---hhee-----ecc---CccccCcCcccccCCCCCCcchhhh
Confidence 1000 011 1223568899999999999998765
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.97 E-value=2.6e-09 Score=98.41 Aligned_cols=125 Identities=24% Similarity=0.352 Sum_probs=79.8
Q ss_pred EEEEEEEcCCCeEEEEEEeccCC--------------C--------------chHHHHHHHHHHHhcCCC-CCceeEEEe
Q 011945 22 EIYLGTNIQTNEEVAIKLENVKT--------------K--------------HPQLQYEAKLYKILQGGT-GIPNLRWFG 72 (474)
Q Consensus 22 ~Vy~a~~~~~~~~vAvK~~~~~~--------------~--------------~~~l~~E~~il~~l~~~~-~i~~l~~~~ 72 (474)
.||.|.. ..|..||||+..... . .....+|.+.|.++.... .+|....+
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 4899986 678899999743210 0 013678999999998653 36655433
Q ss_pred EeCCEEEEEEecCC--CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH-HHHCCccccCCCCCcEEeeeCCCCCeEEEEe
Q 011945 73 VEGDYNVLVIDLLG--PSLEDLFNFCSRKLSLKTVLMLADQMINRVEF-VHSKSFLHRDIKPDNFLMGLGRRANQVYIID 149 (474)
Q Consensus 73 ~~~~~~~lv~e~~g--~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~y-LHs~gIiHrDIKP~NILl~~~~~~~~vkL~D 149 (474)
.. .+|||||++ +.....+... .++......++.+++..+.. +|..||||+||.+.|||++ .+.++|+|
T Consensus 79 -~~--~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~----~~~~~iID 149 (188)
T PF01163_consen 79 -NR--NVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD----DGKVYIID 149 (188)
T ss_dssp -ET--TEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE----TTCEEE--
T ss_pred -eC--CEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee----cceEEEEe
Confidence 33 479999997 4332223211 12244567778888886655 5799999999999999995 34899999
Q ss_pred cCCccccc
Q 011945 150 FGLAKRYR 157 (474)
Q Consensus 150 FGla~~~~ 157 (474)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99987544
No 450
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.89 E-value=1.2e-09 Score=114.95 Aligned_cols=154 Identities=13% Similarity=0.196 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCcccccccc--CCCCccCcccccccccc
Q 011945 110 DQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE--NKNLTGTARYASMNTHL 186 (474)
Q Consensus 110 ~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~--~~~~~GT~~Y~APE~~~ 186 (474)
.+++.||.|+|. .++||++|.|++|.+ +..+.+||+.|+++.............|.. .....-...|.|||++.
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hcccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345599999997 699999999999999 588999999999987655432211111111 11123456799999999
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCC
Q 011945 187 GIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD 265 (474)
Q Consensus 187 ~~~~s~ksDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt 265 (474)
+...+.++|+|||||++|.+.. |+.-+..... ...... ...............+|+++.+-+.+++..+..-||+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~-~~~~~~---~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~ 258 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGG-LLSYSF---SRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPT 258 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCC-cchhhh---hhcccccccccccccCcHHHHHHHHHHhcCCcccCcc
Confidence 9888999999999999999984 5554443221 111111 1111111111122578999999999999999999997
Q ss_pred HHHHH
Q 011945 266 YAYLK 270 (474)
Q Consensus 266 ~~~l~ 270 (474)
+..+.
T Consensus 259 ~~~l~ 263 (700)
T KOG2137|consen 259 LDLLL 263 (700)
T ss_pred hhhhh
Confidence 66543
No 451
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.76 E-value=1.3e-07 Score=88.63 Aligned_cols=110 Identities=18% Similarity=0.255 Sum_probs=81.4
Q ss_pred chHHHHHHHHHHHhcCCC-CCceeEEEeEeC----CEEEEEEecCC--CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Q 011945 46 HPQLQYEAKLYKILQGGT-GIPNLRWFGVEG----DYNVLVIDLLG--PSLEDLFNFCSRKLSLKTVLMLADQMINRVEF 118 (474)
Q Consensus 46 ~~~l~~E~~il~~l~~~~-~i~~l~~~~~~~----~~~~lv~e~~g--~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~y 118 (474)
.....+|...+..|.... .++....++... ...+|++|++. .+|.+++..... .+......++.+++..+.-
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHH
Confidence 346788999888886321 123333344331 24578888883 379999874332 6777888999999999999
Q ss_pred HHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 119 LHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
||.+||+|+|+++.|||+..++....+.|+||+.++..
T Consensus 134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999999999974444458999999987643
No 452
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.72 E-value=9.4e-07 Score=90.62 Aligned_cols=209 Identities=18% Similarity=0.199 Sum_probs=143.6
Q ss_pred ceEEEEEEEcCCCeEEEEEEeccCCC--chHHHHHHHHHHHhcCCCCCceeEEEe---EeCCEEEEEEecC--CCCHHHH
Q 011945 20 FGEIYLGTNIQTNEEVAIKLENVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFG---VEGDYNVLVIDLL--GPSLEDL 92 (474)
Q Consensus 20 fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~l~~E~~il~~l~~~~~i~~l~~~~---~~~~~~~lv~e~~--g~sL~~l 92 (474)
-.+.|++....+|..|++|.+..... ....-.-+++++++.|.+.|+.-..+. ..+...++|++|+ .++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 35789999999999999998743221 112345578899999887776644333 3456679999998 6688887
Q ss_pred HHHc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 93 FNFC--------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 93 i~~~--------------~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
.-.. +.+.++..+|.++.|+..||.++|+.|+.-+-|.|.+||++ ....++|..-|+...+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~---G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT---GKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee---CcceEEEecccceeeecC
Confidence 5311 12477899999999999999999999999999999999995 444788877776654433
Q ss_pred CCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCcCcHHHHHHHHhhccccchH
Q 011945 159 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTKKQKYEKISEKKVSTSI 237 (474)
Q Consensus 159 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~P-f~~~~~~~~~~~~~~i~~~~~~~~~ 237 (474)
+.. |.+. .-.+-|.=.||.+++.|.||..- |... .. +.. ..
T Consensus 446 d~~---------------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~~d--~~--~~s----------~~ 487 (655)
T KOG3741|consen 446 DPT---------------------EPLE---SQQQNDLRDLGLLLLALATGTENSNRTD--ST--QSS----------HL 487 (655)
T ss_pred CCC---------------------cchh---HHhhhhHHHHHHHHHHHhhccccccccc--ch--HHH----------HH
Confidence 221 1111 12367999999999999998542 2211 11 111 12
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011945 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 270 (474)
Q Consensus 238 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 270 (474)
..+...++.++++++.+....++++ -+..++.
T Consensus 488 ~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~ll 519 (655)
T KOG3741|consen 488 TRITTTYSTDLRNVVEYLESLNFRE-KSIQDLL 519 (655)
T ss_pred HHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHH
Confidence 2334566788888888888888886 3444443
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.72 E-value=4.9e-07 Score=84.15 Aligned_cols=137 Identities=12% Similarity=0.081 Sum_probs=98.8
Q ss_pred eecCceEEEEEEEcCCCeEEEEEEecc--------CCCchHHHHHHHHHHHhcCCCC-CceeEEEeEe----CCEEEEEE
Q 011945 16 GSGSFGEIYLGTNIQTNEEVAIKLENV--------KTKHPQLQYEAKLYKILQGGTG-IPNLRWFGVE----GDYNVLVI 82 (474)
Q Consensus 16 G~G~fG~Vy~a~~~~~~~~vAvK~~~~--------~~~~~~l~~E~~il~~l~~~~~-i~~l~~~~~~----~~~~~lv~ 82 (474)
|.||.+-|+.... .|+.+-||.... ....+.+.+|...+..|..... ++....+... .-..+||+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 6689999999763 455788885431 2245679999999999874322 3333333322 22357888
Q ss_pred ecCC--CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccc
Q 011945 83 DLLG--PSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 83 e~~g--~sL~~li~~~-~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
|-++ .+|.+++... -.+.+......++.+|+..|.-||+.|+.|+|+-+.|||+..+ ....|+++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE-GKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC-CCeeEEEEEhhccch
Confidence 8776 7899987532 2246778888999999999999999999999999999999522 123499999987653
No 454
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.66 E-value=2.1e-07 Score=86.95 Aligned_cols=136 Identities=18% Similarity=0.254 Sum_probs=90.4
Q ss_pred ccCCcEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCch-----------HHHHHHHHHHHhcC--CCCCceeEE
Q 011945 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP-----------QLQYEAKLYKILQG--GTGIPNLRW 70 (474)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~-----------~l~~E~~il~~l~~--~~~i~~l~~ 70 (474)
.+.++|.+.+.+-......|.+.. .+|..+++|......... ...+++..+..+.. ......+..
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 467889999999888888787776 678899999765443221 12334444444432 122212111
Q ss_pred Ee-----EeCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCe
Q 011945 71 FG-----VEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 144 (474)
Q Consensus 71 ~~-----~~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~ 144 (474)
.. ......+|+|||+ |..|.++.. +++ .+...|+++|.-||+.|++|+|+.|.||+++ ++.
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~~~ 172 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----NNG 172 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----CCc
Confidence 11 1234457899999 666665543 222 3556777889999999999999999999994 456
Q ss_pred EEEEecCCcc
Q 011945 145 VYIIDFGLAK 154 (474)
Q Consensus 145 vkL~DFGla~ 154 (474)
++++||+..+
T Consensus 173 i~iID~~~k~ 182 (229)
T PF06176_consen 173 IRIIDTQGKR 182 (229)
T ss_pred EEEEECcccc
Confidence 9999998765
No 455
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.62 E-value=3.4e-07 Score=82.00 Aligned_cols=127 Identities=24% Similarity=0.392 Sum_probs=97.6
Q ss_pred EeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCCH
Q 011945 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSL 89 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL 89 (474)
+.+.|++|.+|.||+|.+ .|..+|+|+-..+.....++.|+++|..++.....+.++.|+.+. +.|||. |..|
T Consensus 26 v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~----i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGEDF----IRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechhh----hhhhhhcCcch
Confidence 457799999999999995 566999999998888899999999999999999999998887654 349998 6688
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC--CcEEeeeCCCCCeEEEEecCCccc
Q 011945 90 EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP--DNFLMGLGRRANQVYIIDFGLAKR 155 (474)
Q Consensus 90 ~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP--~NILl~~~~~~~~vkL~DFGla~~ 155 (474)
.++... .+.+.+ ..+++.---|-..||-|..|.- .||++ .++.+.|+||.-|+.
T Consensus 100 ~~~~~~----~~rk~l----~~vlE~a~~LD~~GI~H~El~~~~k~vlv----~~~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIG----GDRKHL----LRVLEKAYKLDRLGIEHGELSRPWKNVLV----NDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhc----ccHHHH----HHHHHHHHHHHHhccchhhhcCCceeEEe----cCCcEEEEEccchhh
Confidence 877652 133333 3344444445668999999864 46666 345899999999873
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.58 E-value=1e-06 Score=83.89 Aligned_cols=71 Identities=18% Similarity=0.130 Sum_probs=56.2
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCC-CceeEEEeEeCCEEEEEEecCCC
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTG-IPNLRWFGVEGDYNVLVIDLLGP 87 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~-i~~l~~~~~~~~~~~lv~e~~g~ 87 (474)
..||.|..+.||+. .+..+++|+.........+.+|.++++.+..... ++....++.......++|+++.|
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 57899999999984 2456889987765555678999999999986555 67777787777778899999944
No 457
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.53 E-value=6.6e-07 Score=85.42 Aligned_cols=133 Identities=19% Similarity=0.317 Sum_probs=95.5
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccC----------------C--------CchHHHHHHHHHHHhcCC-C
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK----------------T--------KHPQLQYEAKLYKILQGG-T 63 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~----------------~--------~~~~l~~E~~il~~l~~~-~ 63 (474)
+.++.+||-|--+.||.|.+ ..|.++|||+-... . .....++|.++|.+|... -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 45778999999999999996 47889999952210 0 011367899999999744 2
Q ss_pred CCceeEEEeEeCCEEEEEEecCCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCC
Q 011945 64 GIPNLRWFGVEGDYNVLVIDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142 (474)
Q Consensus 64 ~i~~l~~~~~~~~~~~lv~e~~g~-sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~ 142 (474)
.||... ..+..++|||+..+ -|..+ +++.+..-.|+..|++-+.-+-..||||+|+.+=|||++ ++
T Consensus 172 ~VP~P~----~~nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~---~d 238 (304)
T COG0478 172 KVPKPI----AWNRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT---ED 238 (304)
T ss_pred CCCCcc----ccccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe---cC
Confidence 344332 23456899999955 33221 224555666677777777777799999999999999995 77
Q ss_pred CeEEEEecCCccc
Q 011945 143 NQVYIIDFGLAKR 155 (474)
Q Consensus 143 ~~vkL~DFGla~~ 155 (474)
+.++|+||=.+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 8999999977654
No 458
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.52 E-value=1e-06 Score=83.35 Aligned_cols=136 Identities=21% Similarity=0.238 Sum_probs=92.0
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---------------------ch-----HHHHHHHHHHHhcCCCCCc
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------------HP-----QLQYEAKLYKILQGGTGIP 66 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------~~-----~l~~E~~il~~l~~~~~i~ 66 (474)
..|.+|--+.||+|.. .++..||||+...... .. ...+|..-|+++... +|.
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA-GVr 131 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA-GVR 131 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 3556677779999984 6788999998654321 00 135577777777532 222
Q ss_pred eeEEEeEeCCEEEEEEecCCCCHH--HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCCCC
Q 011945 67 NLRWFGVEGDYNVLVIDLLGPSLE--DLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRAN 143 (474)
Q Consensus 67 ~l~~~~~~~~~~~lv~e~~g~sL~--~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~~~ 143 (474)
.-.-+. -...+|+|||.|.... -.++ .-.+...++..+..++++.+.-|-. .++||+||..=|||+. .+
T Consensus 132 vP~Pi~--~~~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~----~~ 203 (268)
T COG1718 132 VPEPIA--FRNNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH----DG 203 (268)
T ss_pred CCCcee--ecCCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE----CC
Confidence 221111 1235899999966410 0011 1124444788889999999999988 9999999999999993 68
Q ss_pred eEEEEecCCcccccc
Q 011945 144 QVYIIDFGLAKRYRD 158 (474)
Q Consensus 144 ~vkL~DFGla~~~~~ 158 (474)
.++|+|||-|.....
T Consensus 204 ~p~iID~~QaV~~~h 218 (268)
T COG1718 204 EPYIIDVSQAVTIDH 218 (268)
T ss_pred eEEEEECccccccCC
Confidence 899999999976543
No 459
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.49 E-value=6.3e-07 Score=94.55 Aligned_cols=140 Identities=20% Similarity=0.314 Sum_probs=92.6
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCCc------------------------------------h------HHH
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------------------------------------P------QLQ 50 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------------------------------------~------~l~ 50 (474)
.-|+.++-|.||.|+. .+|+.||||+....-.. + ++.
T Consensus 131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 4678999999999996 56999999985432100 0 133
Q ss_pred HHHHHHHHhc----CCCCCceeEEEeEeCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Q 011945 51 YEAKLYKILQ----GGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 125 (474)
Q Consensus 51 ~E~~il~~l~----~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIi 125 (474)
+|..-+.++. +.+.+..-..|..-....+|+|||+ |-.+.++.......++.+.+...+.++. +..+-..|++
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~dgff 287 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRDGFF 287 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCcc
Confidence 4444444443 3333333344444455569999999 6677777533334566554444443332 3444458999
Q ss_pred ccCCCCCcEEeeeCCCCCeEEEEecCCcccccc
Q 011945 126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 126 HrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (474)
|.|..|.||++ +.++.+.+.|||+...+..
T Consensus 288 HaDpHpGNi~v---~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 288 HADPHPGNILV---RSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ccCCCccceEE---ecCCcEEEEcCcceecCCH
Confidence 99999999999 4779999999999876654
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.42 E-value=3.1e-06 Score=79.85 Aligned_cols=139 Identities=18% Similarity=0.262 Sum_probs=81.5
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCC-CceeEEEe---EeCCEEEEEEecC-C
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTG-IPNLRWFG---VEGDYNVLVIDLL-G 86 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~-i~~l~~~~---~~~~~~~lv~e~~-g 86 (474)
++.|+.|..+.||++.... ..++||+.........+..|..+++.|..... ++.+..+. ......+++|+++ |
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 5789999999999999643 58999987654334568899999999985544 55655533 3444578888888 5
Q ss_pred CCHHH----------------HHH---HcC---CCCCHHH---------HHHH------------HHHHHH-HHHHHHH-
Q 011945 87 PSLED----------------LFN---FCS---RKLSLKT---------VLML------------ADQMIN-RVEFVHS- 121 (474)
Q Consensus 87 ~sL~~----------------li~---~~~---~~l~~~~---------~~~i------------~~qi~~-gL~yLHs- 121 (474)
..+.. .+. ... ..+.... .... ...+.. .+..+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 55555 111 110 0111000 0000 111222 2333332
Q ss_pred ------CCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 122 ------KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 122 ------~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
..++|+|+.|.|||++ ..++.+.|+||+.+.
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~--~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVD--PSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEE--SSTTEEEE--GTT-E
T ss_pred hccCCCcEEEEeccccccceee--eccceeEEEecccce
Confidence 4599999999999995 356667899998874
No 461
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.36 E-value=6.2e-06 Score=79.18 Aligned_cols=75 Identities=17% Similarity=0.274 Sum_probs=53.6
Q ss_pred eeeecCc-eEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCCHHH
Q 011945 14 KIGSGSF-GEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSLED 91 (474)
Q Consensus 14 ~LG~G~f-G~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL~~ 91 (474)
.|-.|.. ..||++.. .+..++||+..... ...+..|+++++.+...-.++.+..++......+++|+++ |.+|.+
T Consensus 5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred ecCCCCCcCeEEEEcC--CCCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 3444555 78999974 34688999875543 4568899999999986656667776666666678899988 555553
No 462
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.19 E-value=5.7e-05 Score=70.22 Aligned_cols=132 Identities=22% Similarity=0.316 Sum_probs=94.0
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEeccCC------------------CchHHHHHHHHHHHhc-C----CCCCcee
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT------------------KHPQLQYEAKLYKILQ-G----GTGIPNL 68 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~------------------~~~~l~~E~~il~~l~-~----~~~i~~l 68 (474)
...||+|+.-.||.- ......+||+..... ...+..+|+..+..+. . ...|+.+
T Consensus 6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 356899999999974 344567899876544 2456778888777776 2 3456666
Q ss_pred EEEeEeCCEEEEEEecC-------CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCC
Q 011945 69 RWFGVEGDYNVLVIDLL-------GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 69 ~~~~~~~~~~~lv~e~~-------g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~ 141 (474)
+++...+....+|+|.. ..+|.+++. ...++. .....+. .-..||-+.+|+.+||+|.||++...+.
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~--~~~~~~-~~~~~L~---~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLK--EGGLTE-ELRQALD---EFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHH--cCCccH-HHHHHHH---HHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 66667777778888865 558899886 334665 3333333 4457888999999999999999987665
Q ss_pred CC-eEEEEe-cCC
Q 011945 142 AN-QVYIID-FGL 152 (474)
Q Consensus 142 ~~-~vkL~D-FGl 152 (474)
.. .+.|+| ||.
T Consensus 157 ~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 157 GEFRLVLIDGLGE 169 (199)
T ss_pred CceEEEEEeCCCC
Confidence 55 788999 443
No 463
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.18 E-value=1.8e-07 Score=97.88 Aligned_cols=257 Identities=12% Similarity=0.028 Sum_probs=167.3
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecCCCC
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPS 88 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~g~s 88 (474)
|....-+++|+++.+|+.+...+...+ .+++... ....-++++|.++++++-......-...+.+.+++|+++++.
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~---l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~ 319 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT---LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTG 319 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc---hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCC
Confidence 444556788999999999865555444 6655432 456678899999998873333333345667889999999443
Q ss_pred --HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccc
Q 011945 89 --LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 166 (474)
Q Consensus 89 --L~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (474)
....+......+...+...+...-+.+|++||+.--+|+| ||+. ..+..++.||+....+.....
T Consensus 320 rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~----s~~~~~~~~~~v~~~L~~~~~----- 386 (829)
T KOG0576|consen 320 RSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG----SEEEVKLLDFAVPPQLTRTMK----- 386 (829)
T ss_pred ccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccc----cccccccccccCCcccCcccc-----
Confidence 3222221222355556667777788899999998779999 8887 457889999999877665431
Q ss_pred cccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcH
Q 011945 167 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 246 (474)
Q Consensus 167 ~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 246 (474)
.....+|+.++|||+..+..+..+.|+|++|+--.++.-|-.|-...... ...+....-...+..-...-+.
T Consensus 387 ---~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~-----~~~~g~~p~s~~L~~~~aw~~~ 458 (829)
T KOG0576|consen 387 ---PRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAV-----LPMIGNGPNSPMLTDKSAWSPV 458 (829)
T ss_pred ---cccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCccc-----cCCCCCCCCccccchhhhcCcc
Confidence 35678999999999999999999999999998877887777775431110 0000000000000000000111
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcccccc
Q 011945 247 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTI 292 (474)
Q Consensus 247 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~ 292 (474)
.-.++...|+...|..++.... .+|.++|..+....-....|.-
T Consensus 459 ~~~~~~~~~~~g~P~~pkv~mg--acfsKvfngCpl~i~~aaswIh 502 (829)
T KOG0576|consen 459 FHRDFPAPCLNGLPPTPKVHMG--ACFSKVFNGCPLRIHCAASWIH 502 (829)
T ss_pred cccCCcccccCCCCCCCcchhh--HHHHHHhccCcccceecccccC
Confidence 1123666788888888877654 3688888877766666666653
No 464
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.12 E-value=4.5e-05 Score=70.59 Aligned_cols=124 Identities=19% Similarity=0.294 Sum_probs=85.2
Q ss_pred CcEEEeeeeeecCc-eEEEEEEEcCCCeEEEEEEecc---C--------------------CCchHHHHHHHHHHHhcCC
Q 011945 7 NKFRLGRKIGSGSF-GEIYLGTNIQTNEEVAIKLENV---K--------------------TKHPQLQYEAKLYKILQGG 62 (474)
Q Consensus 7 ~~y~i~~~LG~G~f-G~Vy~a~~~~~~~~vAvK~~~~---~--------------------~~~~~l~~E~~il~~l~~~ 62 (474)
.+++.++.||.|.- |.||+++ ..|+.||||++.. . .....|..|.+.+-+|+..
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 68999999999999 9999998 5788999998221 0 0112377899988888754
Q ss_pred CC-----CceeEEEeEe-----------------CCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Q 011945 63 TG-----IPNLRWFGVE-----------------GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 120 (474)
Q Consensus 63 ~~-----i~~l~~~~~~-----------------~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLH 120 (474)
.. +..+.|+... .....||.||....- .+. ..-+.+|..-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~----~~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQ----IRDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccc----hhHHHHHHHHHHHHH
Confidence 33 3333333222 112356666552211 122 233567778889999
Q ss_pred HCCccccCCCCCcEEeeeCCCCCeEEEEecCCc
Q 011945 121 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (474)
Q Consensus 121 s~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (474)
..||+-+|+|+.|..=+ ||+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~~G--------~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYRGG--------KLVDFSSS 206 (207)
T ss_pred HCCeeeccCccccccCC--------EEEecccC
Confidence 99999999999998732 79999965
No 465
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.12 E-value=1.6e-05 Score=83.88 Aligned_cols=142 Identities=20% Similarity=0.281 Sum_probs=90.4
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCC---------------------------------ch------HHHHHH
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------------------------HP------QLQYEA 53 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------~~------~l~~E~ 53 (474)
+-||.-+.|.||+|+- .+|+.||||+....-. .+ +|.+|.
T Consensus 167 ~piaaASlaQVhrA~L-~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARL-KNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEe-cCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 5689999999999996 4599999997543210 01 133343
Q ss_pred HHHHHh----cCCCC-----CceeEEEeEeCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 011945 54 KLYKIL----QGGTG-----IPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 123 (474)
Q Consensus 54 ~il~~l----~~~~~-----i~~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~g 123 (474)
+-..++ .+-.. ||.+ |.......+|+|||+ |.-+.|+-.-....++...+..-+.++.. +-|-..|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~V--y~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~--~qIf~~G 321 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKV--YWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL--EQIFKTG 321 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCee--hhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH--HHHHhcC
Confidence 333332 22221 3333 333444569999999 66565554333456777765555544432 3334578
Q ss_pred ccccCCCCCcEEeeeC-CCCCeEEEEecCCccccccC
Q 011945 124 FLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRDT 159 (474)
Q Consensus 124 IiHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~~ 159 (474)
++|+|=.|.||++..+ .....+.+.|||+...+.+.
T Consensus 322 ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 322 FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred CccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 9999999999999632 24678999999999866543
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.04 E-value=2.8e-05 Score=74.37 Aligned_cols=73 Identities=16% Similarity=0.182 Sum_probs=46.1
Q ss_pred eeeeeecCce-EEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCC--CCceeEEEeEeC---CEEEEEEecC
Q 011945 12 GRKIGSGSFG-EIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGT--GIPNLRWFGVEG---DYNVLVIDLL 85 (474)
Q Consensus 12 ~~~LG~G~fG-~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~--~i~~l~~~~~~~---~~~~lv~e~~ 85 (474)
++.|+.|+.. .||+.. ..+++|+.........+..|.+++..|...- -++.+...+... ...+++|+++
T Consensus 2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 2 IEPVDSGGTDNATFRLG-----DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred ceeccCCCcccceEEcC-----CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 3567777777 499762 3578898655444557999999999997532 344444433332 2347788887
Q ss_pred -CCCH
Q 011945 86 -GPSL 89 (474)
Q Consensus 86 -g~sL 89 (474)
|.++
T Consensus 77 ~G~~l 81 (235)
T cd05155 77 EGETA 81 (235)
T ss_pred cCCCC
Confidence 4444
No 467
>PLN02876 acyl-CoA dehydrogenase
Probab=97.88 E-value=0.00017 Score=81.53 Aligned_cols=77 Identities=10% Similarity=0.163 Sum_probs=51.7
Q ss_pred EeeeeeecCceEEEEEEEcCCC--eEEEEEEeccCC---CchHHHHHHHHHHHhcCCCCC--ceeEEEeEeC---CEEEE
Q 011945 11 LGRKIGSGSFGEIYLGTNIQTN--EEVAIKLENVKT---KHPQLQYEAKLYKILQGGTGI--PNLRWFGVEG---DYNVL 80 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~--~~vAvK~~~~~~---~~~~l~~E~~il~~l~~~~~i--~~l~~~~~~~---~~~~l 80 (474)
-+++|+.|.+..+|+......+ ..+++|+..... ....+.+|+++++.|..+..+ +.+.+++.+. ...++
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 3678899999999998764332 467888754322 224688999999999743334 4445554432 34689
Q ss_pred EEecCCC
Q 011945 81 VIDLLGP 87 (474)
Q Consensus 81 v~e~~g~ 87 (474)
|||++.+
T Consensus 122 VME~v~G 128 (822)
T PLN02876 122 IMEYLEG 128 (822)
T ss_pred EEEecCC
Confidence 9999844
No 468
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.87 E-value=0.0038 Score=64.24 Aligned_cols=73 Identities=19% Similarity=0.293 Sum_probs=51.7
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEecc---------CCCchHHHHHHHHHHHhcC--CCCCceeEEEeEeCCEEEE
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENV---------KTKHPQLQYEAKLYKILQG--GTGIPNLRWFGVEGDYNVL 80 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~---------~~~~~~l~~E~~il~~l~~--~~~i~~l~~~~~~~~~~~l 80 (474)
.+.||.|.+..||++.+...++.|+||.-.. .........|.+.|+.+.. +..+|.+..+.. ...++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEE
Confidence 4678999999999999754446899997321 1123457888888888753 345777766644 45689
Q ss_pred EEecCC
Q 011945 81 VIDLLG 86 (474)
Q Consensus 81 v~e~~g 86 (474)
|||++.
T Consensus 109 VME~L~ 114 (401)
T PRK09550 109 VMEDLS 114 (401)
T ss_pred EEecCC
Confidence 999873
No 469
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.79 E-value=0.00052 Score=65.29 Aligned_cols=73 Identities=16% Similarity=0.190 Sum_probs=49.0
Q ss_pred eeeeeecCceEEEEEEEcC-CCeEEEEEEeccCCCc-hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCC
Q 011945 12 GRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKTKH-PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 88 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~-~~~~vAvK~~~~~~~~-~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~s 88 (474)
++.|..|-...+|++.... .++.|++|+....... -...+|+.+++.+.....++.+..+.. . .++|||+ |.+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i~G~~ 78 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFIPGRT 78 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEeeCCCc
Confidence 4677888888999997432 3578999976543221 234689999999976666777654432 1 4788887 433
No 470
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.79 E-value=0.0027 Score=64.15 Aligned_cols=70 Identities=14% Similarity=0.231 Sum_probs=46.9
Q ss_pred eeeecCceEEEEEEEcCCCeEEEEEEe----cc-----CCCchHHHHHHHHHHHhcC--CCCCceeEEEeEeCCEEEEEE
Q 011945 14 KIGSGSFGEIYLGTNIQTNEEVAIKLE----NV-----KTKHPQLQYEAKLYKILQG--GTGIPNLRWFGVEGDYNVLVI 82 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvK~~----~~-----~~~~~~l~~E~~il~~l~~--~~~i~~l~~~~~~~~~~~lv~ 82 (474)
.||-|....||++.+...++.|+||.- .. .........|...|+.... +..+|.++.| +.+..+++|
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence 579999999999997544468999941 21 1223456778888877653 2346665544 455567888
Q ss_pred ecC
Q 011945 83 DLL 85 (474)
Q Consensus 83 e~~ 85 (474)
|++
T Consensus 80 EdL 82 (370)
T TIGR01767 80 EDL 82 (370)
T ss_pred hhC
Confidence 887
No 471
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.76 E-value=0.00018 Score=71.78 Aligned_cols=140 Identities=22% Similarity=0.267 Sum_probs=97.1
Q ss_pred EeeeeeecCceEEEEEEEcCCCeEEEEEEeccCC-----------------------C-----chHHHHHHHHHHHhcCC
Q 011945 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----------------------K-----HPQLQYEAKLYKILQGG 62 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----------------------~-----~~~l~~E~~il~~l~~~ 62 (474)
|-..|..|--+.||.|.. .+|..+|||+.+... . .-....|++-|++|...
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 445677888899999984 678889999754210 0 01256788888888743
Q ss_pred CCCceeEEEeEeCCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEeeeCCC
Q 011945 63 TGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRR 141 (474)
Q Consensus 63 ~~i~~l~~~~~~~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs-~gIiHrDIKP~NILl~~~~~ 141 (474)
+|+.-.-... ...+|||+|+|.+-+-.=.-....++...+..+-.|++.-|.-|.. +++||.||.-=|+|+ .
T Consensus 227 -GIP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly----h 299 (520)
T KOG2270|consen 227 -GIPCPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY----H 299 (520)
T ss_pred -CCCCCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE----E
Confidence 3443322211 2358999999754322211113457777888888888888877765 799999999999999 5
Q ss_pred CCeEEEEecCCcccccc
Q 011945 142 ANQVYIIDFGLAKRYRD 158 (474)
Q Consensus 142 ~~~vkL~DFGla~~~~~ 158 (474)
.|.++|+|-+-+.....
T Consensus 300 dG~lyiIDVSQSVE~DH 316 (520)
T KOG2270|consen 300 DGKLYIIDVSQSVEHDH 316 (520)
T ss_pred CCEEEEEEccccccCCC
Confidence 79999999998865443
No 472
>PRK10593 hypothetical protein; Provisional
Probab=97.69 E-value=0.00072 Score=67.10 Aligned_cols=77 Identities=13% Similarity=0.086 Sum_probs=54.0
Q ss_pred cEEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCC--CCceeEEEeEe---CCEEEEEE
Q 011945 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGT--GIPNLRWFGVE---GDYNVLVI 82 (474)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~--~i~~l~~~~~~---~~~~~lv~ 82 (474)
...-.+.||.|..+.||.... .++ .+++|+.+.......+..|...++.|.... .++.+..++.. ....+|||
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYD-SQG-NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred hhheeeecCCccceeEEEEEc-CCC-CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 344567899999999999873 233 577888543224457999999999998653 45566554432 35579999
Q ss_pred ecCC
Q 011945 83 DLLG 86 (474)
Q Consensus 83 e~~g 86 (474)
|++.
T Consensus 93 E~i~ 96 (297)
T PRK10593 93 ERLR 96 (297)
T ss_pred eccC
Confidence 9983
No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.58 E-value=0.00051 Score=66.45 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=77.2
Q ss_pred eeeecCceEEEEEEEcCCCeEEEEEEeccCCCc--hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-CCCHH
Q 011945 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSLE 90 (474)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~-g~sL~ 90 (474)
.+..|-...+|+.. .+++.+++|+....... -....|..+++.+......+.+.+++. .+++|+++ |..+.
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~ 76 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVIT 76 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccc
Confidence 35567788999987 46778999975433222 246889999999986656666655432 26888887 43332
Q ss_pred -----------HH---HHHc-C-----CCCCHH-HHHHHHHHH---------HHHHHHHHH--------CCccccCCCCC
Q 011945 91 -----------DL---FNFC-S-----RKLSLK-TVLMLADQM---------INRVEFVHS--------KSFLHRDIKPD 132 (474)
Q Consensus 91 -----------~l---i~~~-~-----~~l~~~-~~~~i~~qi---------~~gL~yLHs--------~gIiHrDIKP~ 132 (474)
.+ +... . ..++.. .+..+..++ ...+..+-. ..++|+|+.|.
T Consensus 77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~ 156 (256)
T TIGR02721 77 LDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY 156 (256)
T ss_pred cccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence 11 1111 1 112221 111221111 111222221 25899999999
Q ss_pred cEEeeeCCCCCeEEEEecCCcc
Q 011945 133 NFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 133 NILl~~~~~~~~vkL~DFGla~ 154 (474)
|||++ .++ ++|+||..|.
T Consensus 157 Nil~~---~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 157 NLVVT---PQG-LKLIDWEYAS 174 (256)
T ss_pred cEEEe---CCC-CEEEeccccC
Confidence 99995 333 7899999875
No 474
>PRK05231 homoserine kinase; Provisional
Probab=97.53 E-value=0.0022 Score=64.11 Aligned_cols=73 Identities=15% Similarity=0.147 Sum_probs=45.3
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCC-CceeEE------EeEeCCEEEEEEec
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTG-IPNLRW------FGVEGDYNVLVIDL 84 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~-i~~l~~------~~~~~~~~~lv~e~ 84 (474)
.+.|+.|....+|+... ..| .+++|+.. ......+..|..++..|..... ++.+.. +.......++++++
T Consensus 27 ~~~l~~G~~n~~y~v~t-~~g-~~vLK~~~-~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~ 103 (319)
T PRK05231 27 LKGIAEGIENSNFFLTT-TQG-EYVLTLFE-RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF 103 (319)
T ss_pred cchhccccccceEEEEe-CCC-cEEEEEec-cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence 45567777789999874 333 68999876 3344567778888888863321 233221 12234556788888
Q ss_pred CCC
Q 011945 85 LGP 87 (474)
Q Consensus 85 ~g~ 87 (474)
+.|
T Consensus 104 l~G 106 (319)
T PRK05231 104 LEG 106 (319)
T ss_pred cCC
Confidence 733
No 475
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.52 E-value=0.00088 Score=75.33 Aligned_cols=202 Identities=16% Similarity=0.149 Sum_probs=125.2
Q ss_pred HHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe----cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 011945 49 LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID----LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 123 (474)
Q Consensus 49 l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e----~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~g 123 (474)
...|...+..+.|.+.. .+..|+.+....-++++ +| ..++..++. .-..++..+++.+..++++||.|+|+..
T Consensus 229 ~E~e~~~l~k~~~~n~~-~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q-~v~~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLG-GYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ-SVGSIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHHhhcccccc-ceeEEeehhhcchHHHHHHHhhcCccchHHHHh-hccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 45566777777755544 44444444433333333 34 556666665 3456899999999999999999999985
Q ss_pred ccccCCCCCcEEeeeCCCCCeEEEE--ecCCccccccCCCccccccccCCCCccCccccccccccCCCCC--chhhHHHH
Q 011945 124 FLHRDIKPDNFLMGLGRRANQVYII--DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS--RRDDLESL 199 (474)
Q Consensus 124 IiHrDIKP~NILl~~~~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s--~ksDIwSl 199 (474)
..|.-+...-..-...+..+.+.+. ||+..+.+.+.... ....-+..|-++|......+. ...|+|.+
T Consensus 307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~--------~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS--------FSDLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred cceeEEecccccccccCccceeecchhhhcccccCCCcccc--------hhhcCccccccccccccccchhhhhhHHHHH
Confidence 5554443331111112345556666 88888776654321 122345567788877766554 44799999
Q ss_pred HHHHHHHHhCCCCCCCCCcCcHHHHHHHHhhccccchHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011945 200 GYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 279 (474)
Q Consensus 200 Gvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 279 (474)
|..+..+..|..+-... . ....-++..+..+..+.+..|+.-+.++|+...++ +...|.+
T Consensus 379 gll~~~~~~~~~i~~~~------~-----------~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~l---l~~~f~~ 438 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKS------A-----------VPVSLLDVLSTSELLDALPKCLDEDSEERLSALEL---LTHPFLR 438 (1351)
T ss_pred HHHHhhhhhcCcccccc------c-----------chhhhhccccchhhhhhhhhhcchhhhhccchhhh---hhchhcc
Confidence 99999998876542110 0 01111122223378889999999999999997665 5555544
Q ss_pred c
Q 011945 280 E 280 (474)
Q Consensus 280 ~ 280 (474)
.
T Consensus 439 ~ 439 (1351)
T KOG1035|consen 439 F 439 (1351)
T ss_pred c
Confidence 3
No 476
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.51 E-value=0.0012 Score=65.78 Aligned_cols=140 Identities=16% Similarity=0.232 Sum_probs=79.8
Q ss_pred EEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCC-CceeEE------EeEeCCEEEEEE
Q 011945 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTG-IPNLRW------FGVEGDYNVLVI 82 (474)
Q Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~-i~~l~~------~~~~~~~~~lv~ 82 (474)
..++.|+.|....+|++.. . +..+++|+.........+..|.+++..|..... ++.+.. +.......++++
T Consensus 25 ~~i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~ 102 (307)
T TIGR00938 25 LSLKGIAEGVENSNYLLTT-D-VGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV 102 (307)
T ss_pred eeccccCCccccceEEEEe-C-CCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence 3356677777789999873 3 346888987553334567788888888863321 233211 112244568888
Q ss_pred ecCCC-C-----HHH------HH---HHcCCCC----------C-HHHHH------------HHHHHHHHHHHHHHH---
Q 011945 83 DLLGP-S-----LED------LF---NFCSRKL----------S-LKTVL------------MLADQMINRVEFVHS--- 121 (474)
Q Consensus 83 e~~g~-s-----L~~------li---~~~~~~l----------~-~~~~~------------~i~~qi~~gL~yLHs--- 121 (474)
+++.| . ..+ .+ ......+ . +.... .....+...++++..
T Consensus 103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~ 182 (307)
T TIGR00938 103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP 182 (307)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence 88733 2 111 11 1101111 0 00000 001123344555543
Q ss_pred ----CCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 122 ----KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 122 ----~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
.++||+|+.+.||+++ .++.+.|+||+.+.
T Consensus 183 ~~~~~~l~HgD~~~~Nvl~~---~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 183 RDLPRGVIHADLFPDNVLFD---GDSVKGVIDFYFAC 216 (307)
T ss_pred hcCCCccCCCCCCcCcEEEE---CCceEEEeeccccc
Confidence 6899999999999995 44556899999874
No 477
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.46 E-value=0.0011 Score=65.73 Aligned_cols=70 Identities=13% Similarity=0.068 Sum_probs=47.8
Q ss_pred eeeeeecCceEEEEEEEcC------CCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEec
Q 011945 12 GRKIGSGSFGEIYLGTNIQ------TNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 84 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~------~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~ 84 (474)
++.|..|-...||++.... .++.|++|+...... ......|.+++..+......+.+.++... .+++++
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~ 78 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF 78 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence 4556667777999987532 257899999765432 24578999999999866666666655532 346776
Q ss_pred C
Q 011945 85 L 85 (474)
Q Consensus 85 ~ 85 (474)
+
T Consensus 79 i 79 (302)
T cd05156 79 I 79 (302)
T ss_pred e
Confidence 5
No 478
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.34 E-value=0.00071 Score=62.45 Aligned_cols=100 Identities=23% Similarity=0.280 Sum_probs=72.8
Q ss_pred HHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecCC-CCHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHH---CC
Q 011945 50 QYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLG-PSLEDLFNF--CSRKLSLKTVLMLADQMINRVEFVHS---KS 123 (474)
Q Consensus 50 ~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~g-~sL~~li~~--~~~~l~~~~~~~i~~qi~~gL~yLHs---~g 123 (474)
..|.-+++.+++..+++.+.++ .+. +++.|+.+ +++...... .-...+|..+..|+.+++..+++|+. ..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~--CG~--~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGS--CGR--FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeE--CCC--EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 4588899999987766666544 343 45667765 344321000 01236899999999999999999998 45
Q ss_pred ccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 124 IiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
+.-.|++|+||-++ +++.+|++|...+...
T Consensus 83 ~~lcDv~~~nfgv~---~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVN---DDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEe---CCCcEEEEechhcchh
Confidence 77899999999995 6788999999877544
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.34 E-value=0.00012 Score=71.89 Aligned_cols=132 Identities=20% Similarity=0.329 Sum_probs=91.5
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEecc--------CCCc----------------hHHHHHHHHHHHhcCC-C
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV--------KTKH----------------PQLQYEAKLYKILQGG-T 63 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~--------~~~~----------------~~l~~E~~il~~l~~~-~ 63 (474)
+.++++||-|--+.||.+-+ ..|.+.++|+-.. +... -...+|...|+.|..+ -
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 56789999999999999996 6788899995211 0000 1246788999988743 2
Q ss_pred CCceeEEEeEeCCEEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEeeeCCCC
Q 011945 64 GIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142 (474)
Q Consensus 64 ~i~~l~~~~~~~~~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gIiHrDIKP~NILl~~~~~~ 142 (474)
-|+... +....|+||++. |..|.++-+ ..+ +-.+...++.-+.-|-.+|+||+|..-=||+|. ++
T Consensus 173 pVPkpi----D~~RH~Vvmelv~g~Pl~~v~~----v~d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~---dd 238 (465)
T KOG2268|consen 173 PVPKPI----DHNRHCVVMELVDGYPLRQVRH----VED---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVK---DD 238 (465)
T ss_pred CCCCcc----cccceeeHHHhhcccceeeeee----cCC---hHHHHHHHHHHHHHHHHcCceecccchheeEEe---cC
Confidence 233321 334568999988 656655432 122 334455566667788899999999999999994 67
Q ss_pred CeEEEEecCCccc
Q 011945 143 NQVYIIDFGLAKR 155 (474)
Q Consensus 143 ~~vkL~DFGla~~ 155 (474)
+.++++||=-...
T Consensus 239 ~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 239 DKIVVIDFPQMVS 251 (465)
T ss_pred CCEEEeechHhhc
Confidence 8899999976543
No 480
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.32 E-value=0.0023 Score=63.11 Aligned_cols=137 Identities=15% Similarity=0.184 Sum_probs=79.5
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCC-CCceeEE------EeEeCCEEEEEEec
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGT-GIPNLRW------FGVEGDYNVLVIDL 84 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~-~i~~l~~------~~~~~~~~~lv~e~ 84 (474)
++.|..|....+|+... .+..+++|+... .....+..|+.++..|.... .++.+.. +...++..++++++
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK-VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC-CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 56677788789999863 345789998764 34456888999999986432 1233211 12233456788888
Q ss_pred C-CCCHH-----------HHH---HHcCCCC----------CHHHH----------HHHHHHHHHHHHHHHH-------C
Q 011945 85 L-GPSLE-----------DLF---NFCSRKL----------SLKTV----------LMLADQMINRVEFVHS-------K 122 (474)
Q Consensus 85 ~-g~sL~-----------~li---~~~~~~l----------~~~~~----------~~i~~qi~~gL~yLHs-------~ 122 (474)
+ |..+. ..+ ......+ .+... ......+...+.++-. .
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 7 43321 111 1000001 11000 0011112334444443 4
Q ss_pred CccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 123 gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
++||+|+.|.|||++ .++.+.|+||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~---~~~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFD---GDELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEe---CCceEEEeehhhhc
Confidence 799999999999994 45556899999874
No 481
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.26 E-value=0.023 Score=58.20 Aligned_cols=72 Identities=18% Similarity=0.302 Sum_probs=49.2
Q ss_pred eeeeeecCceEEEEEEEcCCCeEEEEEE----eccC----CCchHHHHHHHHHHHhcC--CCCCceeEEEeEeCCEEEEE
Q 011945 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKL----ENVK----TKHPQLQYEAKLYKILQG--GTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~----~~~~----~~~~~l~~E~~il~~l~~--~~~i~~l~~~~~~~~~~~lv 81 (474)
.+.||-|.-..||++.+...++.|+||. +... ....+...|.++|+.+.. +..+|.++.|. .+..++|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D--~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFD--SVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEEC--cHHhhHH
Confidence 6788999999999999743356799994 2221 123456778888887653 34577766554 4445777
Q ss_pred EecC
Q 011945 82 IDLL 85 (474)
Q Consensus 82 ~e~~ 85 (474)
||++
T Consensus 112 MEdL 115 (409)
T PRK12396 112 MEDL 115 (409)
T ss_pred HHhC
Confidence 7776
No 482
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.25 E-value=0.0011 Score=68.72 Aligned_cols=163 Identities=19% Similarity=0.187 Sum_probs=96.9
Q ss_pred CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 011945 45 KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 124 (474)
Q Consensus 45 ~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~gI 124 (474)
...++.-...+++.++|.+...++..........++|||+++.||++++.... +-.... + .+++
T Consensus 25 ~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s~----------~----~~~~ 88 (725)
T KOG1093|consen 25 NSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDESL----------L----AHGV 88 (725)
T ss_pred cHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhhh----------c----cccc
Confidence 44567777888999997776666655555555689999999999999987432 111111 1 2222
Q ss_pred cccCCCCCcEEeeeCCCCCeEEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHH
Q 011945 125 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM 204 (474)
Q Consensus 125 iHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~ 204 (474)
.| -|| ++++| -++... ....| +|+|||++|.++.
T Consensus 89 ~~-----~~~----------~~~td-~~~t~~--------------~~~~~----------------pKsdVwsl~~i~~ 122 (725)
T KOG1093|consen 89 LH-----LNI----------IYITD-HFLTKY--------------PSPIG----------------PKSDVWSLGFIIL 122 (725)
T ss_pred ce-----ehh----------hhccc-cccccC--------------CCCCC----------------cchhhhhHHHHHH
Confidence 22 222 23344 111100 00111 4999999999999
Q ss_pred HHHhCCCCCCCCCcCcHHHHHHHHhhccccc---hHH-HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011945 205 YFLRGSLPWQGLKAGTKKQKYEKISEKKVST---SIE-ALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 269 (474)
Q Consensus 205 elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~---~~~-~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 269 (474)
|+.-|..-|...........+.+........ ..+ .+.-.++..+.++...|+-..|..||...++
T Consensus 123 el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~ 191 (725)
T KOG1093|consen 123 ELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMEL 191 (725)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHH
Confidence 9999988886644333222222221111100 011 1123467788999999999999999876654
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.21 E-value=0.0026 Score=62.45 Aligned_cols=46 Identities=7% Similarity=0.047 Sum_probs=30.4
Q ss_pred eecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCC
Q 011945 16 GSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGG 62 (474)
Q Consensus 16 G~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~ 62 (474)
++|-...||.+. ...|..+++|.-........+.+|.+++..|..+
T Consensus 20 ~~g~~~~v~~i~-~~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~ 65 (276)
T cd05152 20 ESGLDFQVVFAK-DTDGVPWVLRIPRRPDVSERAAAEKRVLALVRKH 65 (276)
T ss_pred CCcceeEEEEEE-cCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 333334555553 2457889999865433445689999999999854
No 484
>PLN02236 choline kinase
Probab=96.95 E-value=0.015 Score=58.98 Aligned_cols=137 Identities=12% Similarity=0.157 Sum_probs=79.7
Q ss_pred eeeeeecCceEEEEEEEcC----CCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC-
Q 011945 12 GRKIGSGSFGEIYLGTNIQ----TNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 85 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~----~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~- 85 (474)
+..|-.|-.-.+|++.... .++.|++|+...... .-....|..+++.+.....-+.+.+++..+ .+++|+
T Consensus 41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~ 116 (344)
T PLN02236 41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIH 116 (344)
T ss_pred EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeC
Confidence 4455557788999987432 346899998754321 123477999999998777777776655333 356665
Q ss_pred CCCHHH-----------H---HHH-cCCC------CC-HHHHHHHHHHH-----------------HHHHHHHH------
Q 011945 86 GPSLED-----------L---FNF-CSRK------LS-LKTVLMLADQM-----------------INRVEFVH------ 120 (474)
Q Consensus 86 g~sL~~-----------l---i~~-~~~~------l~-~~~~~~i~~qi-----------------~~gL~yLH------ 120 (474)
+.+|.. + +.. +... .. +..+..++.++ ...+..|.
T Consensus 117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 196 (344)
T PLN02236 117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD 196 (344)
T ss_pred CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence 334321 1 110 0101 11 22232332221 11122221
Q ss_pred --HCCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 121 --SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 121 --s~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
...++|+|+++.|||++ +.++.++|+||..|.
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~--~~~~~~~lID~Eya~ 230 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMID--EETRAITIIDYEYAS 230 (344)
T ss_pred CCCceEEeCCCCcCcEEEe--CCCCcEEEEeehhcc
Confidence 23589999999999996 334689999998874
No 485
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.80 E-value=0.00026 Score=81.10 Aligned_cols=130 Identities=12% Similarity=-0.018 Sum_probs=97.5
Q ss_pred eCCEEEEEEecC-CCCHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHHC-----CccccCCCCCcEEeeeCCCCCe
Q 011945 74 EGDYNVLVIDLL-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK-----SFLHRDIKPDNFLMGLGRRANQ 144 (474)
Q Consensus 74 ~~~~~~lv~e~~-g~sL~~li~~~~~---~l~~~~~~~i~~qi~~gL~yLHs~-----gIiHrDIKP~NILl~~~~~~~~ 144 (474)
+....+.+++++ +|.+.+.+-.... .++..-+.....+.+.+..-+|+. --+|++||+-|.+| ..+..
T Consensus 1302 ~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmI---Vtny~ 1378 (2724)
T KOG1826|consen 1302 ESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMI---VTNYN 1378 (2724)
T ss_pred CChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccce---ecCCc
Confidence 444557778877 8888888753322 244445555555547777777763 27899999999999 47788
Q ss_pred EEEEecCCccccccCCCccccccccCCCCccCccccccccccCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 011945 145 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 213 (474)
Q Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~ksDIwSlGvil~elltG~~Pf 213 (474)
+|+.++|+.+....... ......+++.|+++++.....++.++|+|..|+-+|+...|..+|
T Consensus 1379 v~~gk~gLdKIknp~~s-------f~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1379 VKLGKGGLDKIKNPVLS-------FFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred ccccccccccccCchHh-------hhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 99999999983332221 124457889999999999889999999999999999999888777
No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.72 E-value=0.018 Score=57.97 Aligned_cols=70 Identities=14% Similarity=0.062 Sum_probs=44.3
Q ss_pred eeeeeecCceEEEEEEEcCC---CeEEEEEEeccCCCc-hHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEecC
Q 011945 12 GRKIGSGSFGEIYLGTNIQT---NEEVAIKLENVKTKH-PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~---~~~vAvK~~~~~~~~-~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
++.|..|=...+|++..... +..|++|+....... -.-..|..+++.+.....-+.+.++...+ ++.+|+
T Consensus 19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~fi 92 (330)
T PLN02421 19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSFI 92 (330)
T ss_pred EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeCCc----Eeehhh
Confidence 34444477778999874332 347999987543321 23468999999998777767766555322 356665
No 487
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.42 E-value=0.058 Score=55.62 Aligned_cols=73 Identities=15% Similarity=0.289 Sum_probs=48.5
Q ss_pred EeeeeeecCceEEEEEEEcCCCeEEEEEEec-----cCC----CchHHHHHHHHHHHhcC--CCCCceeEEEeEeCCEEE
Q 011945 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLEN-----VKT----KHPQLQYEAKLYKILQG--GTGIPNLRWFGVEGDYNV 79 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~-----~~~----~~~~l~~E~~il~~l~~--~~~i~~l~~~~~~~~~~~ 79 (474)
..+.||.|....||+..+ .+..|+||.-. ... .......|...|+.+.. +..++.++.++. +..+
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 467889999999999986 34569999633 111 23345566777776653 245666666655 4467
Q ss_pred EEEecCCC
Q 011945 80 LVIDLLGP 87 (474)
Q Consensus 80 lv~e~~g~ 87 (474)
++||++.+
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 88998844
No 488
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.32 E-value=0.013 Score=58.72 Aligned_cols=74 Identities=24% Similarity=0.292 Sum_probs=60.1
Q ss_pred EeCCEEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEeeeCCCCCeEEEEecC
Q 011945 73 VEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFG 151 (474)
Q Consensus 73 ~~~~~~~lv~e~~g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLHs~-gIiHrDIKP~NILl~~~~~~~~vkL~DFG 151 (474)
.++.|.|++|++-|++|.-+- ...+++++.|+.+.+.-|.-+..+ .+=|||+.-.|||| +.|+|.|+||-
T Consensus 296 de~~y~yl~~kdhgt~is~ik-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI----d~GnvtLIDfk 366 (488)
T COG5072 296 DETLYLYLHFKDHGTPISIIK-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI----DEGNVTLIDFK 366 (488)
T ss_pred CCceEEEEEEecCCceeeeee-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee----ecCceEEEEee
Confidence 567788999999998875332 246788899999888777666654 68899999999999 38999999999
Q ss_pred Cccc
Q 011945 152 LAKR 155 (474)
Q Consensus 152 la~~ 155 (474)
+++.
T Consensus 367 lsRl 370 (488)
T COG5072 367 LSRL 370 (488)
T ss_pred eeec
Confidence 9984
No 489
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.11 E-value=0.092 Score=51.79 Aligned_cols=74 Identities=18% Similarity=0.250 Sum_probs=51.7
Q ss_pred EEEeeeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhc--CCCCCceeEEEeEeCCEEEEEEecC
Q 011945 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~--~~~~i~~l~~~~~~~~~~~lv~e~~ 85 (474)
.+-.+.|+.|....+|+.. .+++.+.||+-. ......+..|..-|+.|. ..-.++.+..++......+|+||++
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 3445678889999999987 778899999876 444567999999999994 4556778888887777779999997
No 490
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=95.96 E-value=0.047 Score=54.44 Aligned_cols=31 Identities=23% Similarity=0.461 Sum_probs=25.6
Q ss_pred CccccCCCCCcEEeeeCCCCCeEEEEecCCcccc
Q 011945 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 156 (474)
Q Consensus 123 gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (474)
.++|+|+.+.||+|. ..+-+=|+||+++..-
T Consensus 199 ~lvHGD~~~gNlii~---~~~~~gVlDwe~~~lG 229 (321)
T COG3173 199 VLVHGDYRPGNLIID---PGRPTGVLDWELATLG 229 (321)
T ss_pred eeeeCCcccCCEEEe---CCCeeEEEeccccccC
Confidence 489999999999996 4444889999998643
No 491
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.78 E-value=0.18 Score=50.61 Aligned_cols=66 Identities=11% Similarity=0.064 Sum_probs=39.7
Q ss_pred CceEEEEEEEcCCCeEEEEEEeccCC-CchHHHHHHHHHHHhcCC--CCCcee----EEEeEeCCEEEEEEecC
Q 011945 19 SFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLQYEAKLYKILQGG--TGIPNL----RWFGVEGDYNVLVIDLL 85 (474)
Q Consensus 19 ~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~l~~E~~il~~l~~~--~~i~~l----~~~~~~~~~~~lv~e~~ 85 (474)
.-..||+... .++..+++|+..... ...++..|..++..|... +.+..+ ..+...+.+.+.++++.
T Consensus 37 ~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~ 109 (325)
T PRK11768 37 YENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRR 109 (325)
T ss_pred ccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeee
Confidence 3446898874 456789999876433 345678899999888642 211111 01122345566777776
No 492
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.64 E-value=0.029 Score=52.51 Aligned_cols=30 Identities=37% Similarity=0.707 Sum_probs=20.3
Q ss_pred CccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 123 gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
.++|.||.|.|||+. ...+.++|+||..|.
T Consensus 144 v~cHnDl~~~Nil~~--~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILIN--NKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEET--SSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEec--cCCCeEEEecHHHHh
Confidence 488999999999993 467899999999875
No 493
>PTZ00384 choline kinase; Provisional
Probab=95.54 E-value=0.28 Score=50.45 Aligned_cols=71 Identities=14% Similarity=0.117 Sum_probs=44.4
Q ss_pred EeeeeeecCceEEEEEEEcCC-Ce-----EEEEEEeccCC-CchHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEEEe
Q 011945 11 LGRKIGSGSFGEIYLGTNIQT-NE-----EVAIKLENVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 83 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~-~~-----~vAvK~~~~~~-~~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv~e 83 (474)
.++.|..|-...+|++..... +. .|++++..... ..-.-.+|+++++.|....+-+.+.+.+.. ++++|
T Consensus 54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~e 129 (383)
T PTZ00384 54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQE 129 (383)
T ss_pred EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEE
Confidence 445665688889999974322 12 25555422111 112246799999999988888888766543 57777
Q ss_pred cC
Q 011945 84 LL 85 (474)
Q Consensus 84 ~~ 85 (474)
|+
T Consensus 130 fI 131 (383)
T PTZ00384 130 WV 131 (383)
T ss_pred Ee
Confidence 77
No 494
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.52 E-value=0.076 Score=54.19 Aligned_cols=60 Identities=23% Similarity=0.287 Sum_probs=44.1
Q ss_pred EEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCcEEeee
Q 011945 77 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGL 138 (474)
Q Consensus 77 ~~~lv~e~~-g~sL~~li~~~~~~l~~~~~~~i~~qi~~gL~yLH-s~gIiHrDIKP~NILl~~ 138 (474)
..+|+.+|. |-++..+++. ...+++.+..++.=.++||--|- -.+++|.|+.|.||++..
T Consensus 319 ~~vl~E~~~~Gl~v~~~v~~--~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 319 DLVLVETYERGLSVLRFVKW--KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF 380 (565)
T ss_pred cceeeeeccccccHHhhhhc--ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence 346777777 7788888873 34566667777776777765544 468999999999999964
No 495
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.41 E-value=0.1 Score=52.52 Aligned_cols=131 Identities=17% Similarity=0.200 Sum_probs=74.6
Q ss_pred CceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCCCCCce-----eE--EEeEeC--CEEEEEEecC-CCC
Q 011945 19 SFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGGTGIPN-----LR--WFGVEG--DYNVLVIDLL-GPS 88 (474)
Q Consensus 19 ~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~~~i~~-----l~--~~~~~~--~~~~lv~e~~-g~s 88 (474)
.-..||+... .+| .+++|+........++..|..++..|....+.+. .. ....-. .+.+-+.+++ |..
T Consensus 37 ~eN~~f~~~~-~~g-~~iLki~~~~~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~ 114 (331)
T COG2334 37 EENSNFRVQT-EDG-RYILKIYRPGWTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRP 114 (331)
T ss_pred ccCceEEEEe-cCC-CeEEEEecCCCCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCcC
Confidence 4456888884 334 3499998876566778999999998874433221 11 111122 3566666666 444
Q ss_pred HHH-----HH----------HHcCCC-----------CCHHH-------------HHHHHHHHHHHHHHHHH--------
Q 011945 89 LED-----LF----------NFCSRK-----------LSLKT-------------VLMLADQMINRVEFVHS-------- 121 (474)
Q Consensus 89 L~~-----li----------~~~~~~-----------l~~~~-------------~~~i~~qi~~gL~yLHs-------- 121 (474)
+.. .+ ....+. ..|.. -.....++...+..+.+
T Consensus 115 ~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~ 194 (331)
T COG2334 115 LERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLPA 194 (331)
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCCc
Confidence 441 11 000011 11210 01123344445555554
Q ss_pred CC--ccccCCCCCcEEeeeCCCCC-eEEEEecCCcc
Q 011945 122 KS--FLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAK 154 (474)
Q Consensus 122 ~g--IiHrDIKP~NILl~~~~~~~-~vkL~DFGla~ 154 (474)
-+ +||+|+.|.||+++ ... .+.++||+-|.
T Consensus 195 ~~~~iIH~D~~~~NVl~d---~~~~~~g~iDFdDa~ 227 (331)
T COG2334 195 LGDQIIHGDLHPDNVLFD---DDTDVSGFIDFDDAG 227 (331)
T ss_pred ccceeeecCCCccceeEc---CCCCeeeEEEccccc
Confidence 23 99999999999995 333 47899999874
No 496
>PRK06148 hypothetical protein; Provisional
Probab=95.09 E-value=0.39 Score=55.78 Aligned_cols=47 Identities=11% Similarity=0.143 Sum_probs=33.6
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcC
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQG 61 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~ 61 (474)
+.|+ |..-.+|+... .++..+++|+.+.......+..|.+++..|..
T Consensus 31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~ 77 (1013)
T PRK06148 31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSEPRVESDFQTAALDHLAA 77 (1013)
T ss_pred eecC-CcCCceEEEEe-CCCCeEEEEEcCCccchhHHHHHHHHHHHHHh
Confidence 4564 34567888874 56778999998866555567778888887764
No 497
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=94.76 E-value=0.47 Score=47.16 Aligned_cols=29 Identities=24% Similarity=0.462 Sum_probs=25.4
Q ss_pred CccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 123 gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
++||+|+.+.|||++ .++.+.|+||..+.
T Consensus 197 ~lcHgD~~~~Nvl~~---~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLYD---ETRGGYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEEc---CCCCEEEEEhhhcc
Confidence 799999999999994 56678999998875
No 498
>PTZ00296 choline kinase; Provisional
Probab=93.97 E-value=0.73 Score=48.37 Aligned_cols=71 Identities=14% Similarity=0.025 Sum_probs=45.7
Q ss_pred EeeeeeecCceEEEEEEEcC--------CCeEEEEEEeccCCC-chHHHHHHHHHHHhcCCCCCceeEEEeEeCCEEEEE
Q 011945 11 LGRKIGSGSFGEIYLGTNIQ--------TNEEVAIKLENVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 81 (474)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~--------~~~~vAvK~~~~~~~-~~~l~~E~~il~~l~~~~~i~~l~~~~~~~~~~~lv 81 (474)
-++.|..|-.-.+|++.... .++.|++++....+. .-.-..|..+++.+....+-+.+..... .+.+
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~l~~~f~----gg~I 184 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQLLNTFS----GGRI 184 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCceEEEeC----CCEE
Confidence 45666667777899987432 156899998654322 1235679999999987777677654432 2345
Q ss_pred EecC
Q 011945 82 IDLL 85 (474)
Q Consensus 82 ~e~~ 85 (474)
.+|+
T Consensus 185 ~efi 188 (442)
T PTZ00296 185 EEWL 188 (442)
T ss_pred EEee
Confidence 6666
No 499
>PRK06149 hypothetical protein; Provisional
Probab=93.60 E-value=1.2 Score=51.73 Aligned_cols=47 Identities=11% Similarity=0.137 Sum_probs=32.2
Q ss_pred eeeeecCceEEEEEEEcCCCeEEEEEEeccCCCchHHHHHHHHHHHhcCC
Q 011945 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQGG 62 (474)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~l~~E~~il~~l~~~ 62 (474)
..|+.+. -.+|+... ++..+++|+.+.......+..|..++..|...
T Consensus 37 ~~L~s~~-d~nf~v~t--~~~~yVLKi~~~~~~~~~l~~e~~~l~hL~~~ 83 (972)
T PRK06149 37 TELGSQQ-DRNFRVDS--DGGRFVLKICHAAYAAVELEAQHAALRHLAER 83 (972)
T ss_pred EecCCcC-cceEEEEe--cCCcEEEEeCCccCChHHHHHHHHHHHHHHhh
Confidence 4555333 36888874 23478889987655556788888888888643
No 500
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=93.57 E-value=0.14 Score=50.75 Aligned_cols=29 Identities=38% Similarity=0.729 Sum_probs=24.5
Q ss_pred CCccccCCCCCcEEeeeCCCCCeEEEEecCCcc
Q 011945 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (474)
Q Consensus 122 ~gIiHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (474)
.++||+|+.+.|||++ . +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~---~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLK---D-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEe---C-CcEEEEECcccc
Confidence 5799999999999995 3 568999999764
Done!