Query 011959
Match_columns 474
No_of_seqs 438 out of 2590
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 07:06:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011959.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011959hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0001 HemL Glutamate-1-semia 100.0 5.4E-90 1.2E-94 659.5 46.0 426 49-474 3-429 (432)
2 PLN02482 glutamate-1-semialdeh 100.0 1.8E-81 4E-86 633.8 50.4 441 33-474 34-474 (474)
3 COG4992 ArgD Ornithine/acetylo 100.0 8.6E-81 1.9E-85 590.1 40.1 368 79-473 22-398 (404)
4 COG0160 GabT 4-aminobutyrate a 100.0 6.4E-77 1.4E-81 581.3 43.5 409 48-473 13-445 (447)
5 PRK12389 glutamate-1-semialdeh 100.0 1.1E-74 2.4E-79 583.7 49.9 425 49-474 2-428 (428)
6 PRK00615 glutamate-1-semialdeh 100.0 1.1E-72 2.3E-77 565.9 47.6 420 50-473 4-428 (433)
7 PRK07046 aminotransferase; Val 100.0 1.1E-71 2.4E-76 562.3 48.7 418 49-474 26-451 (453)
8 TIGR00713 hemL glutamate-1-sem 100.0 5E-69 1.1E-73 545.2 48.2 423 52-474 1-423 (423)
9 KOG1404 Alanine-glyoxylate ami 100.0 6E-70 1.3E-74 504.1 37.1 410 45-467 3-432 (442)
10 PRK07678 aminotransferase; Val 100.0 4.3E-69 9.3E-74 545.0 45.3 416 49-474 3-450 (451)
11 PRK07482 hypothetical protein; 100.0 5.8E-69 1.2E-73 544.9 46.1 421 50-473 2-454 (461)
12 COG0161 BioA Adenosylmethionin 100.0 5.9E-70 1.3E-74 528.4 36.6 388 82-473 27-443 (449)
13 PRK00062 glutamate-1-semialdeh 100.0 1.5E-68 3.2E-73 539.8 47.7 425 50-474 1-425 (426)
14 PRK06062 hypothetical protein; 100.0 2.7E-68 5.9E-73 538.5 45.3 392 81-474 35-446 (451)
15 PRK05965 hypothetical protein; 100.0 4.3E-68 9.4E-73 538.2 45.5 390 81-473 28-447 (459)
16 PRK06058 4-aminobutyrate amino 100.0 4.8E-68 1E-72 537.7 45.7 402 49-474 15-443 (443)
17 KOG1401 Acetylornithine aminot 100.0 1.5E-68 3.2E-73 498.9 37.0 410 53-474 10-431 (433)
18 PRK06938 diaminobutyrate--2-ox 100.0 7.3E-68 1.6E-72 536.1 44.4 383 81-473 45-460 (464)
19 PRK11522 putrescine--2-oxoglut 100.0 7.4E-68 1.6E-72 534.8 43.7 373 80-473 62-451 (459)
20 PRK07481 hypothetical protein; 100.0 1.5E-67 3.4E-72 533.3 43.5 390 81-474 24-446 (449)
21 PRK06931 diaminobutyrate--2-ox 100.0 1.3E-67 2.8E-72 534.2 42.2 389 81-473 40-454 (459)
22 PRK05639 4-aminobutyrate amino 100.0 1.1E-66 2.3E-71 526.6 46.2 396 51-473 13-443 (457)
23 PRK06943 adenosylmethionine--8 100.0 4.4E-67 9.5E-72 529.5 43.0 383 81-473 36-446 (453)
24 TIGR03372 putres_am_tran putre 100.0 4.3E-67 9.4E-72 525.4 42.5 368 82-471 58-442 (442)
25 PRK06916 adenosylmethionine--8 100.0 8.4E-67 1.8E-71 529.0 44.4 416 52-474 12-456 (460)
26 PRK08742 adenosylmethionine--8 100.0 1.8E-66 3.8E-71 525.9 45.0 388 82-473 47-467 (472)
27 PRK07030 adenosylmethionine--8 100.0 1.9E-66 4.2E-71 526.0 44.0 389 82-474 30-447 (466)
28 PRK07483 hypothetical protein; 100.0 1.9E-66 4.1E-71 524.0 43.1 385 81-473 12-437 (443)
29 PRK08593 4-aminobutyrate amino 100.0 5.1E-66 1.1E-70 521.7 46.3 407 51-473 2-429 (445)
30 PRK05769 4-aminobutyrate amino 100.0 8.4E-66 1.8E-70 519.5 44.5 406 48-474 12-440 (441)
31 PRK06541 hypothetical protein; 100.0 1.8E-65 4E-70 518.6 45.6 419 50-473 6-455 (460)
32 PLN02760 4-aminobutyrate:pyruv 100.0 8.9E-66 1.9E-70 524.1 42.8 389 81-473 71-491 (504)
33 TIGR00709 dat 2,4-diaminobutyr 100.0 6.4E-66 1.4E-70 521.6 41.2 389 81-473 21-435 (442)
34 PRK07495 4-aminobutyrate amino 100.0 4.6E-65 9.9E-70 511.8 46.8 377 82-474 23-422 (425)
35 PRK07036 hypothetical protein; 100.0 2.8E-65 6E-70 518.2 45.2 389 81-473 33-452 (466)
36 KOG1402 Ornithine aminotransfe 100.0 1.7E-66 3.6E-71 469.8 31.6 392 49-472 19-426 (427)
37 PRK06777 4-aminobutyrate amino 100.0 7.2E-65 1.6E-69 511.2 47.0 394 53-472 3-420 (421)
38 PRK06917 hypothetical protein; 100.0 2.9E-65 6.3E-70 515.9 43.8 389 82-473 15-437 (447)
39 PRK06082 4-aminobutyrate amino 100.0 6.8E-65 1.5E-69 514.4 45.7 381 82-473 55-451 (459)
40 PRK07480 putative aminotransfe 100.0 3.5E-65 7.7E-70 516.0 43.3 389 81-473 32-448 (456)
41 PRK12403 putative aminotransfe 100.0 7.9E-65 1.7E-69 514.6 45.3 390 81-473 36-452 (460)
42 PRK08360 4-aminobutyrate amino 100.0 9.8E-65 2.1E-69 511.5 45.3 406 52-473 2-426 (443)
43 PRK06105 aminotransferase; Pro 100.0 1.3E-64 2.7E-69 513.1 45.2 389 81-473 30-449 (460)
44 PRK06918 4-aminobutyrate amino 100.0 1.9E-64 4.2E-69 513.0 45.5 408 49-473 13-443 (451)
45 PRK04612 argD acetylornithine 100.0 5.9E-64 1.3E-68 501.2 44.6 370 81-473 22-403 (408)
46 PRK09792 4-aminobutyrate trans 100.0 8.4E-64 1.8E-68 503.5 45.6 374 82-472 23-420 (421)
47 PRK08117 4-aminobutyrate amino 100.0 8.9E-64 1.9E-68 506.8 45.8 382 82-473 26-429 (433)
48 PRK07986 adenosylmethionine--8 100.0 1.6E-64 3.4E-69 506.8 38.8 377 82-473 26-423 (428)
49 PRK06148 hypothetical protein; 100.0 6.5E-64 1.4E-68 548.2 46.3 385 81-474 606-1011(1013)
50 TIGR03246 arg_catab_astC succi 100.0 1.4E-63 3.1E-68 500.0 44.6 368 81-473 17-395 (397)
51 TIGR00700 GABAtrnsam 4-aminobu 100.0 3.1E-63 6.8E-68 500.4 45.0 383 81-472 15-419 (420)
52 PRK13360 omega amino acid--pyr 100.0 3.1E-63 6.8E-68 500.5 43.5 384 81-474 28-441 (442)
53 PRK06173 adenosylmethionine--8 100.0 3E-63 6.4E-68 498.2 41.3 368 83-473 28-425 (429)
54 TIGR00699 GABAtrns_euk 4-amino 100.0 6.7E-63 1.5E-67 495.4 43.1 393 48-471 17-464 (464)
55 PRK06209 glutamate-1-semialdeh 100.0 6.3E-63 1.4E-67 498.2 43.2 398 53-473 1-405 (431)
56 PRK05964 adenosylmethionine--8 100.0 9.9E-63 2.1E-67 497.6 42.9 377 81-474 24-423 (423)
57 PRK09221 beta alanine--pyruvat 100.0 9.9E-63 2.1E-67 497.2 42.3 384 81-474 31-444 (445)
58 TIGR02407 ectoine_ectB diamino 100.0 1.2E-62 2.6E-67 493.8 41.7 369 81-473 17-412 (412)
59 PRK05630 adenosylmethionine--8 100.0 7.3E-63 1.6E-67 494.9 39.3 375 81-473 22-420 (422)
60 PRK04013 argD acetylornithine/ 100.0 9.9E-63 2.2E-67 483.0 38.9 350 82-473 7-360 (364)
61 PLN00144 acetylornithine trans 100.0 2.5E-62 5.5E-67 487.1 41.2 362 85-474 1-381 (382)
62 PRK06149 hypothetical protein; 100.0 3.8E-62 8.3E-67 534.5 45.5 407 51-473 544-970 (972)
63 PRK12381 bifunctional succinyl 100.0 1.2E-61 2.5E-66 487.6 43.3 368 81-473 21-399 (406)
64 PRK09264 diaminobutyrate--2-ox 100.0 8.1E-62 1.7E-66 490.1 42.1 369 81-473 21-416 (425)
65 PRK03715 argD acetylornithine 100.0 8.1E-62 1.8E-66 484.7 41.6 363 81-474 18-394 (395)
66 PLN02624 ornithine-delta-amino 100.0 3.8E-61 8.1E-66 490.0 46.8 394 50-473 36-444 (474)
67 PRK08297 L-lysine aminotransfe 100.0 1.4E-61 3.1E-66 488.5 40.0 375 83-474 28-442 (443)
68 PRK04073 rocD ornithine--oxo-a 100.0 8.5E-60 1.8E-64 473.5 43.4 380 51-471 2-395 (396)
69 PRK01278 argD acetylornithine 100.0 3.4E-59 7.4E-64 468.7 42.9 365 81-474 13-389 (389)
70 PRK05093 argD bifunctional N-s 100.0 2.6E-58 5.6E-63 463.8 45.1 368 81-473 22-400 (403)
71 TIGR03251 LAT_fam L-lysine 6-t 100.0 6.5E-59 1.4E-63 469.0 39.4 372 82-470 18-431 (431)
72 PF00202 Aminotran_3: Aminotra 100.0 7.5E-60 1.6E-64 461.5 31.4 315 84-409 1-338 (339)
73 TIGR00508 bioA adenosylmethion 100.0 1.4E-58 3E-63 465.6 41.1 377 82-473 28-426 (427)
74 PLN02974 adenosylmethionine-8- 100.0 1.3E-57 2.7E-62 481.3 45.9 412 50-471 311-816 (817)
75 PRK08088 4-aminobutyrate amino 100.0 3.2E-57 7E-62 457.7 45.9 400 53-473 4-423 (425)
76 PRK03244 argD acetylornithine 100.0 9.8E-57 2.1E-61 452.4 44.1 364 81-474 25-395 (398)
77 PRK02936 argD acetylornithine 100.0 1.4E-56 3E-61 448.2 41.9 362 81-471 11-377 (377)
78 TIGR01885 Orn_aminotrans ornit 100.0 1.8E-55 3.8E-60 443.1 44.1 386 54-472 2-401 (401)
79 cd00610 OAT_like Acetyl ornith 100.0 2.9E-55 6.3E-60 444.5 44.7 394 57-471 2-413 (413)
80 PRK00854 rocD ornithine--oxo-a 100.0 1.7E-54 3.7E-59 436.5 44.3 384 51-472 3-400 (401)
81 PRK02627 acetylornithine amino 100.0 2.4E-54 5.2E-59 435.3 43.8 365 81-474 21-395 (396)
82 PTZ00125 ornithine aminotransf 100.0 2.3E-53 4.9E-58 428.5 43.3 369 81-473 13-395 (400)
83 KOG1403 Predicted alanine-glyo 100.0 3.6E-55 7.8E-60 391.4 26.6 401 53-472 7-436 (452)
84 PRK04260 acetylornithine amino 100.0 2.7E-53 5.9E-58 423.7 41.2 360 81-471 11-375 (375)
85 TIGR00707 argD acetylornithine 100.0 7.6E-49 1.6E-53 393.1 40.5 361 81-471 9-379 (379)
86 KOG1405 4-aminobutyrate aminot 100.0 3.1E-43 6.7E-48 321.4 26.4 395 47-474 34-484 (484)
87 PLN02822 serine palmitoyltrans 100.0 2.4E-39 5.1E-44 330.3 36.5 374 52-473 65-477 (481)
88 PRK07505 hypothetical protein; 100.0 4.7E-37 1E-41 309.4 37.2 361 53-473 8-399 (402)
89 COG0156 BioF 7-keto-8-aminopel 100.0 2.9E-35 6.2E-40 285.9 34.3 333 86-470 27-387 (388)
90 PRK13393 5-aminolevulinate syn 100.0 5.4E-34 1.2E-38 287.5 36.1 326 97-473 43-396 (406)
91 PLN02955 8-amino-7-oxononanoat 100.0 3.6E-34 7.7E-39 284.4 33.1 327 97-473 100-461 (476)
92 TIGR01821 5aminolev_synth 5-am 100.0 1E-33 2.2E-38 285.4 37.1 328 97-474 43-397 (402)
93 PRK09064 5-aminolevulinate syn 100.0 8.6E-33 1.9E-37 279.2 36.2 326 98-473 45-397 (407)
94 PLN03227 serine palmitoyltrans 100.0 9.4E-33 2E-37 275.9 31.0 330 102-473 1-382 (392)
95 PRK05958 8-amino-7-oxononanoat 100.0 8.8E-32 1.9E-36 270.2 37.0 336 83-471 24-385 (385)
96 PRK07179 hypothetical protein; 100.0 3.1E-31 6.7E-36 267.7 37.5 331 80-473 43-398 (407)
97 TIGR01825 gly_Cac_T_rel pyrido 100.0 3.6E-31 7.8E-36 265.8 36.3 339 82-473 17-381 (385)
98 TIGR01822 2am3keto_CoA 2-amino 100.0 9.5E-31 2.1E-35 263.4 38.0 342 82-473 21-389 (393)
99 PRK06939 2-amino-3-ketobutyrat 100.0 9.5E-31 2.1E-35 263.8 37.7 341 82-473 25-393 (397)
100 PRK13392 5-aminolevulinate syn 100.0 4E-30 8.6E-35 259.9 35.2 327 97-473 44-397 (410)
101 KOG1359 Glycine C-acetyltransf 100.0 2.5E-30 5.5E-35 231.5 26.2 336 82-472 49-411 (417)
102 COG0436 Aspartate/tyrosine/aro 100.0 8E-30 1.7E-34 253.3 32.5 334 99-473 28-391 (393)
103 TIGR00858 bioF 8-amino-7-oxono 100.0 5.2E-29 1.1E-33 247.8 34.3 332 85-468 3-360 (360)
104 KOG1360 5-aminolevulinate synt 100.0 3.5E-29 7.6E-34 232.7 26.5 352 71-474 145-525 (570)
105 PLN02483 serine palmitoyltrans 100.0 1.6E-27 3.4E-32 244.0 38.4 364 53-473 56-466 (489)
106 COG1168 MalY Bifunctional PLP- 100.0 2.2E-27 4.9E-32 222.0 29.6 348 86-473 10-386 (388)
107 PRK06225 aspartate aminotransf 100.0 3.4E-27 7.5E-32 236.2 32.9 337 97-473 26-376 (380)
108 PRK03317 histidinol-phosphate 100.0 1.2E-27 2.5E-32 238.6 28.5 320 100-472 27-363 (368)
109 PRK07682 hypothetical protein; 100.0 3.6E-27 7.7E-32 236.0 29.6 333 100-473 21-376 (378)
110 PLN00175 aminotransferase fami 100.0 1.4E-26 3E-31 233.5 32.7 333 100-473 55-413 (413)
111 PRK07324 transaminase; Validat 100.0 3.9E-27 8.5E-32 234.7 27.8 336 94-473 21-370 (373)
112 PRK07681 aspartate aminotransf 100.0 2.2E-26 4.9E-31 231.7 32.3 330 98-469 31-384 (399)
113 PRK15481 transcriptional regul 100.0 1.2E-26 2.7E-31 235.8 30.6 324 100-472 86-430 (431)
114 PRK05937 8-amino-7-oxononanoat 100.0 3.1E-26 6.7E-31 228.2 32.5 317 98-473 3-350 (370)
115 PRK06207 aspartate aminotransf 100.0 5.2E-26 1.1E-30 229.0 33.7 339 98-473 38-402 (405)
116 PRK07366 succinyldiaminopimela 100.0 4.3E-26 9.4E-31 228.9 31.6 334 97-470 28-387 (388)
117 PRK06108 aspartate aminotransf 100.0 9.2E-26 2E-30 226.3 33.0 333 100-472 25-381 (382)
118 PRK08153 histidinol-phosphate 100.0 3E-26 6.5E-31 228.2 29.1 323 100-473 33-365 (369)
119 PRK03158 histidinol-phosphate 100.0 2.4E-26 5.3E-31 228.4 27.4 318 100-470 30-358 (359)
120 PRK08960 hypothetical protein; 100.0 1.1E-25 2.3E-30 225.9 32.1 331 98-472 31-386 (387)
121 PRK01533 histidinol-phosphate 100.0 1.7E-26 3.6E-31 229.2 25.7 321 97-472 27-354 (366)
122 PRK08636 aspartate aminotransf 100.0 2.2E-25 4.9E-30 224.6 33.8 343 97-473 31-400 (403)
123 PRK09147 succinyldiaminopimela 100.0 1.4E-25 3E-30 225.8 32.1 331 97-472 27-395 (396)
124 PRK09148 aminotransferase; Val 100.0 1.4E-25 3.1E-30 226.0 31.3 338 97-473 28-390 (405)
125 cd06454 KBL_like KBL_like; thi 100.0 1.7E-25 3.8E-30 221.5 31.2 320 99-470 1-348 (349)
126 PRK06290 aspartate aminotransf 99.9 2.4E-25 5.3E-30 224.0 31.6 343 97-474 42-406 (410)
127 PRK08068 transaminase; Reviewe 99.9 3E-25 6.4E-30 222.9 31.9 330 98-470 31-386 (389)
128 COG0079 HisC Histidinol-phosph 99.9 1.5E-25 3.2E-30 218.9 28.7 316 100-473 23-354 (356)
129 PRK14809 histidinol-phosphate 99.9 1.1E-25 2.4E-30 223.4 28.1 321 97-472 28-356 (357)
130 PRK07309 aromatic amino acid a 99.9 2.6E-25 5.7E-30 223.2 30.9 337 99-474 30-389 (391)
131 TIGR03537 DapC succinyldiamino 99.9 3.5E-25 7.5E-30 219.2 31.2 327 100-469 1-349 (350)
132 PRK09082 methionine aminotrans 99.9 2.4E-25 5.1E-30 223.3 29.7 330 99-469 30-385 (386)
133 PRK02731 histidinol-phosphate 99.9 2.4E-25 5.3E-30 221.9 29.4 324 97-473 30-366 (367)
134 PLN02187 rooty/superroot1 99.9 5.6E-25 1.2E-29 224.2 32.6 343 97-473 64-438 (462)
135 PRK09276 LL-diaminopimelate am 99.9 5.7E-25 1.2E-29 220.6 31.9 330 98-469 30-384 (385)
136 PRK08175 aminotransferase; Val 99.9 7E-25 1.5E-29 220.5 32.6 336 98-473 28-389 (395)
137 PRK12414 putative aminotransfe 99.9 7.5E-25 1.6E-29 219.4 32.6 329 100-469 30-383 (384)
138 PRK06348 aspartate aminotransf 99.9 7.7E-25 1.7E-29 219.4 32.4 331 100-470 30-382 (384)
139 TIGR03540 DapC_direct LL-diami 99.9 8.5E-25 1.9E-29 219.2 31.9 330 98-469 28-382 (383)
140 TIGR03576 pyridox_MJ0158 pyrid 99.9 3.5E-25 7.7E-30 217.1 28.4 301 111-472 28-346 (346)
141 PRK13355 bifunctional HTH-doma 99.9 2.2E-25 4.8E-30 231.1 28.0 341 96-473 143-514 (517)
142 PRK06855 aminotransferase; Val 99.9 1.1E-24 2.5E-29 221.0 32.4 351 98-473 31-429 (433)
143 PRK08361 aspartate aminotransf 99.9 7.4E-25 1.6E-29 220.1 30.7 339 99-474 33-391 (391)
144 PRK00950 histidinol-phosphate 99.9 5.3E-25 1.2E-29 219.0 29.2 320 96-471 31-360 (361)
145 PRK05942 aspartate aminotransf 99.9 1.5E-24 3.3E-29 218.0 32.4 331 98-470 34-389 (394)
146 PRK07683 aminotransferase A; V 99.9 3.5E-24 7.5E-29 214.8 34.5 333 99-473 28-383 (387)
147 PRK05839 hypothetical protein; 99.9 6.6E-25 1.4E-29 218.9 29.1 325 98-472 23-373 (374)
148 PRK05764 aspartate aminotransf 99.9 1.1E-24 2.4E-29 219.3 30.8 338 99-473 31-391 (393)
149 TIGR01264 tyr_amTase_E tyrosin 99.9 1.5E-24 3.2E-29 218.7 31.5 341 98-474 30-400 (401)
150 TIGR03538 DapC_gpp succinyldia 99.9 1.7E-24 3.7E-29 217.6 31.6 330 96-470 25-392 (393)
151 PRK08363 alanine aminotransfer 99.9 1.4E-24 3.1E-29 218.6 31.0 342 98-473 29-394 (398)
152 PLN02656 tyrosine transaminase 99.9 4.6E-24 1E-28 215.3 34.2 340 97-473 29-403 (409)
153 PRK08912 hypothetical protein; 99.9 2.7E-24 5.9E-29 215.8 32.3 333 100-473 27-386 (387)
154 PLN00143 tyrosine/nicotianamin 99.9 3.3E-24 7.2E-29 216.2 32.7 341 95-473 28-404 (409)
155 PLN00145 tyrosine/nicotianamin 99.9 3E-24 6.5E-29 217.4 32.2 340 98-473 51-424 (430)
156 PRK02610 histidinol-phosphate 99.9 1.2E-24 2.7E-29 217.0 29.0 328 99-474 28-372 (374)
157 PTZ00433 tyrosine aminotransfe 99.9 4.2E-24 9.1E-29 215.9 33.2 351 91-473 25-408 (412)
158 PRK08056 threonine-phosphate d 99.9 1.4E-24 3.1E-29 215.2 28.9 324 96-472 17-354 (356)
159 PRK06107 aspartate aminotransf 99.9 3.8E-24 8.2E-29 215.7 32.3 344 98-474 32-401 (402)
160 KOG0257 Kynurenine aminotransf 99.9 1.8E-25 4E-30 211.3 21.0 330 116-469 45-415 (420)
161 PRK07777 aminotransferase; Val 99.9 5E-24 1.1E-28 213.9 32.9 334 100-472 25-385 (387)
162 PRK09105 putative aminotransfe 99.9 1.4E-24 3.1E-29 215.9 28.3 318 99-472 43-369 (370)
163 PRK06358 threonine-phosphate d 99.9 2.9E-24 6.3E-29 212.7 29.8 320 99-471 19-353 (354)
164 PRK05957 aspartate aminotransf 99.9 5.2E-24 1.1E-28 213.7 31.7 330 101-473 29-385 (389)
165 PRK14807 histidinol-phosphate 99.9 5.7E-24 1.2E-28 210.5 31.3 317 101-471 24-350 (351)
166 PLN03026 histidinol-phosphate 99.9 3.6E-24 7.9E-29 213.8 29.3 319 97-470 50-379 (380)
167 PRK07865 N-succinyldiaminopime 99.9 4.9E-24 1.1E-28 212.2 29.7 315 98-468 26-363 (364)
168 PRK09257 aromatic amino acid a 99.9 1.2E-24 2.7E-29 218.8 25.0 332 100-471 27-396 (396)
169 TIGR01141 hisC histidinol-phos 99.9 4.5E-24 9.9E-29 211.1 28.7 314 99-468 19-346 (346)
170 COG1167 ARO8 Transcriptional r 99.9 9.8E-24 2.1E-28 214.4 31.6 337 96-473 86-455 (459)
171 PRK07550 hypothetical protein; 99.9 7.7E-24 1.7E-28 212.5 30.4 332 98-470 28-384 (386)
172 PTZ00377 alanine aminotransfer 99.9 7.7E-24 1.7E-28 217.8 31.1 331 117-473 90-475 (481)
173 PRK05664 threonine-phosphate d 99.9 5E-24 1.1E-28 208.9 27.8 302 99-473 20-328 (330)
174 PRK06425 histidinol-phosphate 99.9 2.1E-24 4.6E-29 211.9 25.0 295 100-471 17-331 (332)
175 PRK05387 histidinol-phosphate 99.9 6.5E-24 1.4E-28 210.6 28.7 319 98-472 23-352 (353)
176 TIGR03539 DapC_actino succinyl 99.9 8.3E-24 1.8E-28 209.8 29.2 315 97-467 19-356 (357)
177 PRK06959 putative threonine-ph 99.9 3.6E-24 7.8E-29 210.4 26.3 301 99-473 24-333 (339)
178 PRK03321 putative aminotransfe 99.9 3.2E-24 7E-29 212.6 24.9 319 100-473 23-351 (352)
179 PRK04870 histidinol-phosphate 99.9 6.8E-24 1.5E-28 210.6 26.5 319 98-471 25-356 (356)
180 PLN02672 methionine S-methyltr 99.9 2.6E-23 5.6E-28 223.8 32.7 351 92-472 690-1079(1082)
181 TIGR01140 L_thr_O3P_dcar L-thr 99.9 6.4E-24 1.4E-28 208.3 26.0 301 99-467 17-329 (330)
182 PRK07568 aspartate aminotransf 99.9 5.6E-23 1.2E-27 207.2 33.5 332 99-473 30-392 (397)
183 PRK07590 L,L-diaminopimelate a 99.9 6.9E-24 1.5E-28 214.2 26.6 337 98-470 33-408 (409)
184 PRK14808 histidinol-phosphate 99.9 5.3E-24 1.1E-28 209.0 24.9 319 87-470 7-334 (335)
185 PRK07337 aminotransferase; Val 99.9 3.4E-23 7.3E-28 208.0 31.2 333 100-471 31-387 (388)
186 PRK05166 histidinol-phosphate 99.9 1.6E-23 3.5E-28 208.8 28.5 321 98-471 35-369 (371)
187 PLN02450 1-aminocyclopropane-1 99.9 2.6E-23 5.6E-28 212.4 30.3 305 137-473 88-430 (468)
188 PRK07392 threonine-phosphate d 99.9 4.3E-23 9.3E-28 205.1 31.1 319 99-472 22-358 (360)
189 PTZ00376 aspartate aminotransf 99.9 8.7E-24 1.9E-28 213.1 26.3 334 99-473 29-403 (404)
190 PRK09265 aminotransferase AlaT 99.9 2.9E-23 6.2E-28 209.5 30.0 340 97-473 31-401 (404)
191 TIGR01265 tyr_nico_aTase tyros 99.9 3E-23 6.6E-28 209.2 30.0 342 97-473 29-401 (403)
192 PF00155 Aminotran_1_2: Aminot 99.9 2.1E-23 4.6E-28 207.7 28.3 320 100-467 2-363 (363)
193 PRK09440 avtA valine--pyruvate 99.9 2.7E-23 5.7E-28 210.7 29.1 334 100-473 31-411 (416)
194 PRK03967 histidinol-phosphate 99.9 1.9E-23 4.2E-28 205.4 25.6 309 97-472 16-333 (337)
195 PLN02376 1-aminocyclopropane-1 99.9 8.6E-23 1.9E-27 209.3 30.9 307 137-472 96-437 (496)
196 PRK06836 aspartate aminotransf 99.9 2.3E-22 4.9E-27 202.2 33.4 329 99-473 33-391 (394)
197 PRK08354 putative aminotransfe 99.9 1.3E-22 2.8E-27 197.4 30.3 298 97-470 6-309 (311)
198 PLN02607 1-aminocyclopropane-1 99.9 1.4E-22 3.1E-27 205.4 31.1 346 93-473 39-437 (447)
199 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.8E-22 3.8E-27 201.2 28.9 294 140-473 52-368 (370)
200 TIGR03542 DAPAT_plant LL-diami 99.9 1.8E-22 3.8E-27 203.5 28.8 335 98-470 32-401 (402)
201 PRK01688 histidinol-phosphate 99.9 1.7E-23 3.7E-28 206.9 20.9 305 101-468 30-351 (351)
202 PRK07908 hypothetical protein; 99.9 3.8E-22 8.2E-27 197.5 30.1 312 98-472 21-346 (349)
203 PLN02721 threonine aldolase 99.9 3.4E-22 7.3E-27 198.3 29.4 331 100-474 6-353 (353)
204 PLN02231 alanine transaminase 99.9 2.9E-22 6.2E-27 206.6 28.5 332 117-473 142-527 (534)
205 cd00613 GDC-P Glycine cleavage 99.9 2.3E-22 5E-27 202.8 26.6 320 106-467 23-398 (398)
206 cd00609 AAT_like Aspartate ami 99.9 3.3E-22 7.1E-27 197.8 26.5 314 116-469 12-350 (350)
207 PLN02397 aspartate transaminas 99.9 7.5E-22 1.6E-26 199.6 28.5 297 138-472 94-420 (423)
208 cd06502 TA_like Low-specificit 99.9 4.8E-22 1E-26 196.0 25.8 319 103-469 1-337 (338)
209 PRK04781 histidinol-phosphate 99.9 4.5E-22 9.9E-27 197.7 24.8 285 141-472 61-362 (364)
210 PRK10534 L-threonine aldolase; 99.9 9.4E-22 2E-26 193.5 24.5 320 101-472 1-332 (333)
211 PRK09275 aspartate aminotransf 99.9 3E-22 6.5E-27 203.8 21.0 335 113-473 110-517 (527)
212 PRK04635 histidinol-phosphate 99.9 8.6E-22 1.9E-26 195.2 23.5 309 98-470 30-352 (354)
213 PRK13520 L-tyrosine decarboxyl 99.9 5.9E-21 1.3E-25 190.7 29.6 314 114-473 30-371 (371)
214 PRK08637 hypothetical protein; 99.9 6E-21 1.3E-25 191.5 29.4 304 137-474 46-387 (388)
215 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.3E-20 2.9E-25 188.8 30.7 332 111-473 27-381 (387)
216 TIGR03392 FeS_syn_CsdA cystein 99.9 4.5E-20 9.8E-25 186.0 34.1 327 98-473 16-395 (398)
217 TIGR03801 asp_4_decarbox aspar 99.9 8.5E-22 1.8E-26 200.2 20.8 340 112-473 103-516 (521)
218 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.7E-20 5.8E-25 184.8 31.0 318 116-471 10-355 (355)
219 KOG0259 Tyrosine aminotransfer 99.9 3.1E-20 6.7E-25 173.0 28.5 321 116-473 79-433 (447)
220 KOG1357 Serine palmitoyltransf 99.9 2.4E-21 5.2E-26 183.9 19.8 326 96-471 131-500 (519)
221 PRK13238 tnaA tryptophanase/L- 99.9 4E-20 8.7E-25 187.5 29.9 333 119-472 58-432 (460)
222 PLN02368 alanine transaminase 99.9 3.3E-21 7.2E-26 192.9 21.5 245 138-406 110-392 (407)
223 PRK10874 cysteine sulfinate de 99.9 2E-19 4.4E-24 181.4 34.1 326 98-473 19-398 (401)
224 KOG1358 Serine palmitoyltransf 99.9 1.8E-20 3.9E-25 174.9 24.0 378 53-473 50-465 (467)
225 cd06451 AGAT_like Alanine-glyo 99.9 3E-20 6.6E-25 184.5 26.4 313 116-472 10-356 (356)
226 PRK02948 cysteine desulfurase; 99.9 2.3E-19 5E-24 179.8 28.5 314 114-473 10-374 (381)
227 TIGR02326 transamin_PhnW 2-ami 99.9 4.4E-19 9.5E-24 176.6 30.0 316 117-472 15-361 (363)
228 TIGR03402 FeS_nifS cysteine de 99.9 3.2E-19 7E-24 178.6 28.3 322 101-473 2-372 (379)
229 cd06453 SufS_like Cysteine des 99.9 1.8E-18 3.9E-23 172.9 33.1 314 113-467 8-373 (373)
230 TIGR01976 am_tr_V_VC1184 cyste 99.9 2.1E-18 4.5E-23 173.9 33.1 323 99-467 18-397 (397)
231 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 9.9E-19 2.2E-23 173.9 29.5 328 112-471 9-360 (361)
232 TIGR03812 tyr_de_CO2_Arch tyro 99.8 1.1E-18 2.4E-23 174.4 29.6 311 116-469 32-372 (373)
233 COG1104 NifS Cysteine sulfinat 99.8 8.2E-19 1.8E-23 168.1 26.8 323 100-473 3-377 (386)
234 PRK13479 2-aminoethylphosphona 99.8 1.9E-18 4.1E-23 172.5 30.7 317 116-474 16-364 (368)
235 TIGR01979 sufS cysteine desulf 99.8 2.8E-18 6.1E-23 173.3 31.2 326 100-474 20-402 (403)
236 PRK09295 bifunctional cysteine 99.8 1.2E-17 2.7E-22 168.6 34.4 326 98-472 23-403 (406)
237 PLN02409 serine--glyoxylate am 99.8 1.8E-18 4E-23 174.0 27.3 318 117-473 21-372 (401)
238 COG2008 GLY1 Threonine aldolas 99.8 2.2E-18 4.7E-23 161.7 25.3 323 102-471 2-341 (342)
239 TIGR01437 selA_rel uncharacter 99.8 2E-17 4.4E-22 163.9 32.5 320 100-471 9-363 (363)
240 TIGR01814 kynureninase kynuren 99.8 1.4E-17 3E-22 168.2 30.7 321 113-471 36-405 (406)
241 cd00378 SHMT Serine-glycine hy 99.8 9.4E-18 2E-22 169.5 29.4 326 99-473 19-385 (402)
242 cd00617 Tnase_like Tryptophana 99.8 3.5E-18 7.7E-23 171.0 25.8 351 96-473 17-408 (431)
243 KOG0256 1-aminocyclopropane-1- 99.8 1.3E-17 2.8E-22 157.0 26.8 306 136-472 122-460 (471)
244 PLN02855 Bifunctional selenocy 99.8 1.7E-17 3.6E-22 168.6 30.2 327 99-473 33-418 (424)
245 COG0520 csdA Selenocysteine ly 99.8 3.1E-17 6.8E-22 163.1 31.1 325 100-472 24-404 (405)
246 PRK00011 glyA serine hydroxyme 99.8 3.5E-17 7.6E-22 165.9 30.0 318 99-472 25-388 (416)
247 KOG1368 Threonine aldolase [Am 99.8 4.9E-18 1.1E-22 153.3 19.9 328 100-470 22-365 (384)
248 TIGR03403 nifS_epsilon cystein 99.8 1.3E-16 2.7E-21 160.1 30.9 321 101-473 2-375 (382)
249 PLN02242 methionine gamma-lyas 99.8 9.3E-18 2E-22 168.6 22.5 243 137-409 74-334 (418)
250 TIGR02006 IscS cysteine desulf 99.8 6.3E-17 1.4E-21 163.2 28.7 255 99-386 4-281 (402)
251 cd06450 DOPA_deC_like DOPA dec 99.8 2.3E-17 5E-22 163.1 23.4 278 137-469 36-344 (345)
252 cd00614 CGS_like CGS_like: Cys 99.8 1.5E-17 3.2E-22 165.6 21.5 237 137-409 38-293 (369)
253 TIGR01977 am_tr_V_EF2568 cyste 99.8 1.2E-16 2.7E-21 159.8 28.0 311 116-469 12-375 (376)
254 PRK13034 serine hydroxymethylt 99.8 4.3E-16 9.4E-21 157.1 31.9 307 117-473 41-392 (416)
255 PRK06767 methionine gamma-lyas 99.8 6.8E-17 1.5E-21 161.5 23.1 285 137-474 59-386 (386)
256 COG0075 Serine-pyruvate aminot 99.8 3E-16 6.5E-21 151.7 26.5 321 116-474 16-364 (383)
257 KOG0634 Aromatic amino acid am 99.8 2.4E-16 5.3E-21 149.7 25.2 287 157-473 126-466 (472)
258 PRK14012 cysteine desulfurase; 99.8 4.3E-16 9.2E-21 157.3 27.6 254 99-386 4-283 (404)
259 TIGR02379 ECA_wecE TDP-4-keto- 99.8 4.5E-16 9.8E-21 154.7 26.9 310 117-471 10-375 (376)
260 PLN02651 cysteine desulfurase 99.8 3.3E-16 7.2E-21 155.9 24.9 245 115-386 10-277 (364)
261 cd00616 AHBA_syn 3-amino-5-hyd 99.7 6.2E-16 1.3E-20 153.3 25.7 300 121-468 2-352 (352)
262 COG3977 Alanine-alpha-ketoisov 99.7 1.6E-15 3.5E-20 137.3 24.9 307 137-473 76-411 (417)
263 PRK07049 methionine gamma-lyas 99.7 1.2E-15 2.7E-20 153.8 26.2 214 137-387 81-311 (427)
264 PRK06460 hypothetical protein; 99.7 8E-16 1.7E-20 153.0 24.5 234 137-409 43-297 (376)
265 TIGR01325 O_suc_HS_sulf O-succ 99.7 4.1E-16 8.9E-21 155.5 22.3 238 136-409 51-306 (380)
266 PRK06234 methionine gamma-lyas 99.7 5.8E-16 1.3E-20 155.3 22.8 216 137-386 62-283 (400)
267 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 3.4E-15 7.4E-20 149.0 27.8 308 118-471 11-374 (375)
268 TIGR03235 DNA_S_dndA cysteine 99.7 1E-15 2.3E-20 151.7 23.5 245 114-386 8-279 (353)
269 PF00266 Aminotran_5: Aminotra 99.7 1.8E-15 3.9E-20 151.1 25.2 305 114-463 9-371 (371)
270 TIGR02080 O_succ_thio_ly O-suc 99.7 1.6E-15 3.6E-20 150.9 24.6 233 136-409 48-304 (382)
271 PRK07810 O-succinylhomoserine 99.7 6.9E-16 1.5E-20 154.6 22.0 234 136-410 67-324 (403)
272 PRK08249 cystathionine gamma-s 99.7 1.7E-15 3.7E-20 151.5 24.6 238 136-409 61-316 (398)
273 PRK08247 cystathionine gamma-s 99.7 3.7E-15 8.1E-20 148.0 26.1 232 136-409 49-288 (366)
274 PRK08045 cystathionine gamma-s 99.7 3.2E-15 7E-20 148.9 25.0 233 136-409 49-305 (386)
275 KOG0633 Histidinol phosphate a 99.7 5.7E-16 1.2E-20 137.5 17.2 281 142-470 72-374 (375)
276 PRK07504 O-succinylhomoserine 99.7 2.6E-15 5.7E-20 150.4 24.3 238 136-409 62-318 (398)
277 TIGR01324 cysta_beta_ly_B cyst 99.7 3.2E-15 6.9E-20 148.4 24.4 212 138-386 49-265 (377)
278 TIGR01328 met_gam_lyase methio 99.7 1.3E-15 2.7E-20 152.3 21.7 239 137-409 57-313 (391)
279 PRK08133 O-succinylhomoserine 99.7 6E-15 1.3E-19 147.5 26.4 237 137-409 59-313 (390)
280 PRK13580 serine hydroxymethylt 99.7 2E-14 4.3E-19 143.9 29.1 214 232-472 208-444 (493)
281 PRK00451 glycine dehydrogenase 99.7 1.7E-14 3.8E-19 147.6 28.8 280 143-471 116-446 (447)
282 PRK08776 cystathionine gamma-s 99.7 1.2E-14 2.6E-19 145.6 26.0 237 136-409 57-313 (405)
283 PLN03226 serine hydroxymethylt 99.7 5E-14 1.1E-18 143.4 30.8 312 116-472 46-418 (475)
284 PLN03032 serine decarboxylase; 99.7 3.7E-14 8.1E-19 139.5 28.8 305 118-469 37-372 (374)
285 PRK07050 cystathionine beta-ly 99.7 1.3E-14 2.9E-19 145.0 26.1 210 136-386 62-281 (394)
286 PRK07582 cystathionine gamma-l 99.7 7.6E-15 1.6E-19 145.6 24.1 212 136-387 48-264 (366)
287 PRK02769 histidine decarboxyla 99.7 9.1E-14 2E-18 137.8 31.0 287 138-472 64-371 (380)
288 PRK05968 hypothetical protein; 99.7 1.3E-14 2.7E-19 145.2 24.6 250 137-439 61-327 (389)
289 PRK07503 methionine gamma-lyas 99.7 1.6E-14 3.5E-19 145.0 25.0 216 137-386 63-282 (403)
290 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 2.1E-14 4.6E-19 144.9 25.4 163 136-329 54-219 (418)
291 PTZ00094 serine hydroxymethylt 99.7 7.9E-14 1.7E-18 142.4 29.5 318 116-472 46-407 (452)
292 PRK08574 cystathionine gamma-s 99.7 2.7E-14 5.9E-19 142.3 25.4 212 137-386 51-268 (385)
293 PRK11658 UDP-4-amino-4-deoxy-L 99.7 4.7E-14 1E-18 140.9 27.2 309 118-472 14-378 (379)
294 PRK07811 cystathionine gamma-s 99.7 2.7E-14 5.8E-19 142.8 24.7 237 137-409 59-314 (388)
295 PRK06084 O-acetylhomoserine am 99.7 2.8E-14 6E-19 143.8 24.1 218 137-387 56-308 (425)
296 PRK08861 cystathionine gamma-s 99.7 3E-14 6.4E-19 141.6 23.8 237 136-409 50-306 (388)
297 PRK09028 cystathionine beta-ly 99.6 1.6E-14 3.5E-19 143.4 20.5 234 139-409 61-313 (394)
298 PRK07269 cystathionine gamma-s 99.6 4.2E-14 9E-19 139.8 22.0 229 137-409 52-288 (364)
299 COG0399 WecE Predicted pyridox 99.6 3.6E-13 7.8E-18 130.7 27.5 308 118-473 15-373 (374)
300 TIGR01329 cysta_beta_ly_E cyst 99.6 1E-13 2.2E-18 138.2 24.3 211 138-386 46-262 (378)
301 PRK15407 lipopolysaccharide bi 99.6 3.7E-13 8.1E-18 136.2 28.5 305 121-472 47-435 (438)
302 PRK05994 O-acetylhomoserine am 99.6 5.6E-14 1.2E-18 141.9 22.0 238 138-409 62-349 (427)
303 TIGR01788 Glu-decarb-GAD gluta 99.6 2.3E-13 5.1E-18 136.7 26.2 324 116-474 53-430 (431)
304 cd00615 Orn_deC_like Ornithine 99.6 3.4E-15 7.3E-20 144.0 12.2 229 136-385 56-293 (294)
305 PRK04311 selenocysteine syntha 99.6 6.7E-13 1.5E-17 134.2 29.3 315 116-472 98-463 (464)
306 PLN02509 cystathionine beta-ly 99.6 1.5E-13 3.3E-18 138.8 24.2 208 138-386 132-348 (464)
307 KOG2862 Alanine-glyoxylate ami 99.6 5.6E-13 1.2E-17 121.7 25.1 310 111-473 39-382 (385)
308 PRK04366 glycine dehydrogenase 99.6 5E-13 1.1E-17 137.2 27.5 320 115-473 81-448 (481)
309 TIGR03531 selenium_SpcS O-phos 99.6 4.2E-13 9.1E-18 134.3 26.1 298 138-471 104-444 (444)
310 PRK08248 O-acetylhomoserine am 99.6 2.9E-13 6.2E-18 136.6 25.3 159 137-327 62-224 (431)
311 TIGR03588 PseC UDP-4-keto-6-de 99.6 7.4E-13 1.6E-17 132.6 28.1 309 118-471 10-380 (380)
312 PRK05967 cystathionine beta-ly 99.6 3.7E-13 8.1E-18 133.4 23.4 239 137-409 62-316 (395)
313 PF01041 DegT_DnrJ_EryC1: DegT 99.6 5.7E-13 1.2E-17 132.4 24.2 304 118-468 5-363 (363)
314 TIGR00474 selA seryl-tRNA(sec) 99.6 2.9E-12 6.4E-17 129.2 28.9 310 116-467 93-453 (454)
315 PRK08064 cystathionine beta-ly 99.6 4.3E-13 9.3E-18 134.2 22.7 234 138-409 53-306 (390)
316 PRK05939 hypothetical protein; 99.6 1.1E-12 2.5E-17 131.1 25.6 159 137-328 45-207 (397)
317 PRK06702 O-acetylhomoserine am 99.6 5.2E-13 1.1E-17 133.8 22.9 255 117-409 38-347 (432)
318 KOG1549 Cysteine desulfurase N 99.6 1.5E-12 3.3E-17 125.7 24.7 197 100-329 45-257 (428)
319 PRK03080 phosphoserine aminotr 99.6 1.1E-12 2.4E-17 131.0 24.1 309 117-473 24-373 (378)
320 PLN02414 glycine dehydrogenase 99.6 2.5E-12 5.5E-17 139.2 28.0 304 139-473 568-907 (993)
321 PRK07671 cystathionine beta-ly 99.5 6.5E-13 1.4E-17 132.2 21.8 213 137-386 48-265 (377)
322 TIGR02618 tyr_phenol_ly tyrosi 99.5 3.1E-12 6.7E-17 126.4 25.6 341 99-472 38-425 (450)
323 PRK06176 cystathionine gamma-s 99.5 6.7E-13 1.5E-17 132.1 21.1 168 137-336 48-220 (380)
324 PRK08114 cystathionine beta-ly 99.5 1.9E-12 4.2E-17 128.2 23.6 236 138-409 61-316 (395)
325 cd01494 AAT_I Aspartate aminot 99.5 3.2E-13 7E-18 118.8 16.1 164 142-328 3-170 (170)
326 PRK07812 O-acetylhomoserine am 99.5 1.8E-12 4E-17 130.6 23.5 158 138-327 68-230 (436)
327 PLN02880 tyrosine decarboxylas 99.5 3.8E-12 8.2E-17 130.4 23.9 313 137-473 120-484 (490)
328 PRK08134 O-acetylhomoserine am 99.5 6.3E-12 1.4E-16 126.9 25.1 159 137-327 62-224 (433)
329 PRK13237 tyrosine phenol-lyase 99.5 2.1E-11 4.6E-16 120.8 28.0 343 98-472 44-432 (460)
330 PLN02263 serine decarboxylase 99.5 4.2E-11 9.1E-16 119.8 30.1 291 137-472 131-442 (470)
331 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 5.7E-12 1.2E-16 124.7 22.6 234 137-410 53-311 (386)
332 TIGR00461 gcvP glycine dehydro 99.5 2.4E-11 5.1E-16 130.2 28.8 303 139-473 530-867 (939)
333 PLN02590 probable tyrosine dec 99.5 3.4E-11 7.4E-16 123.5 28.8 312 137-473 168-532 (539)
334 PRK05367 glycine dehydrogenase 99.5 8.9E-12 1.9E-16 135.6 25.9 300 139-473 542-875 (954)
335 PRK05355 3-phosphoserine/phosp 99.5 2.9E-11 6.4E-16 119.6 25.5 306 116-473 14-358 (360)
336 COG1448 TyrB Aspartate/tyrosin 99.5 1E-11 2.2E-16 117.5 20.7 275 159-470 98-395 (396)
337 TIGR03799 NOD_PanD_pyr putativ 99.4 4.7E-11 1E-15 122.7 26.2 307 137-466 127-518 (522)
338 TIGR01364 serC_1 phosphoserine 99.4 8.9E-11 1.9E-15 115.6 27.1 307 117-473 4-348 (349)
339 PRK12566 glycine dehydrogenase 99.4 6.1E-11 1.3E-15 126.3 26.8 296 140-473 544-876 (954)
340 cd00611 PSAT_like Phosphoserin 99.4 2.5E-11 5.4E-16 120.2 22.5 311 116-470 10-353 (355)
341 TIGR01366 serC_3 phosphoserine 99.4 1.9E-11 4.1E-16 121.1 20.9 309 117-474 15-361 (361)
342 PLN02724 Molybdenum cofactor s 99.4 3.8E-10 8.3E-15 122.8 32.4 342 99-471 35-486 (805)
343 PF01212 Beta_elim_lyase: Beta 99.4 3.2E-13 6.9E-18 128.6 6.6 197 116-335 7-215 (290)
344 COG1103 Archaea-specific pyrid 99.4 7.9E-11 1.7E-15 105.7 21.0 293 142-473 68-380 (382)
345 PRK05613 O-acetylhomoserine am 99.4 6.5E-11 1.4E-15 119.5 23.2 160 137-327 67-230 (437)
346 COG0076 GadB Glutamate decarbo 99.3 4.6E-10 1E-14 113.3 22.6 252 116-387 74-361 (460)
347 PRK06434 cystathionine gamma-l 99.3 6E-10 1.3E-14 110.6 22.6 229 138-409 63-308 (384)
348 COG0626 MetC Cystathionine bet 99.3 8E-10 1.7E-14 108.2 22.9 235 138-410 62-319 (396)
349 COG2873 MET17 O-acetylhomoseri 99.3 8.7E-10 1.9E-14 103.7 21.2 167 138-335 61-230 (426)
350 TIGR02617 tnaA_trp_ase tryptop 99.3 7.8E-09 1.7E-13 101.6 28.3 341 100-472 42-440 (467)
351 PRK15029 arginine decarboxylas 99.3 6.4E-10 1.4E-14 117.6 21.4 233 139-388 205-465 (755)
352 COG3844 Kynureninase [Amino ac 99.3 7.5E-09 1.6E-13 95.7 25.5 331 94-473 27-402 (407)
353 PLN02452 phosphoserine transam 99.2 3.1E-09 6.8E-14 104.8 23.1 311 116-473 18-363 (365)
354 KOG0258 Alanine aminotransfera 99.2 2E-09 4.3E-14 101.6 19.0 301 117-445 88-437 (475)
355 KOG0053 Cystathionine beta-lya 99.2 6.6E-10 1.4E-14 107.5 16.0 188 141-362 79-271 (409)
356 TIGR01365 serC_2 phosphoserine 99.1 2.7E-08 5.8E-13 98.3 24.4 292 138-473 38-373 (374)
357 PLN02271 serine hydroxymethylt 99.1 1.4E-07 3.1E-12 95.6 29.8 268 162-472 221-539 (586)
358 PF01276 OKR_DC_1: Orn/Lys/Arg 99.1 1E-10 2.2E-15 115.4 7.1 231 137-387 64-317 (417)
359 PRK13578 ornithine decarboxyla 99.1 9.1E-09 2E-13 107.9 20.5 311 138-471 173-563 (720)
360 PRK15399 lysine decarboxylase 99.1 3.5E-08 7.5E-13 103.5 24.3 311 138-470 194-556 (713)
361 COG0112 GlyA Glycine/serine hy 99.1 1.5E-07 3.3E-12 89.8 26.3 308 116-473 38-390 (413)
362 PLN02414 glycine dehydrogenase 99.0 1.5E-07 3.3E-12 102.6 27.9 310 101-468 104-464 (993)
363 PF00464 SHMT: Serine hydroxym 99.0 5.6E-08 1.2E-12 95.7 21.6 264 161-467 92-399 (399)
364 PRK15400 lysine decarboxylase 99.0 2.5E-08 5.4E-13 104.6 19.7 309 137-470 193-556 (714)
365 PF00282 Pyridoxal_deC: Pyrido 99.0 5.1E-08 1.1E-12 96.7 20.3 175 138-330 78-278 (373)
366 COG1003 GcvP Glycine cleavage 99.0 2.1E-07 4.4E-12 89.6 23.0 295 139-473 109-447 (496)
367 COG1921 SelA Selenocysteine sy 98.9 1.3E-07 2.8E-12 91.3 20.6 227 111-368 32-273 (395)
368 PF12897 Aminotran_MocR: Alani 98.9 4.8E-07 1E-11 86.4 22.6 287 143-472 73-414 (425)
369 PRK12462 phosphoserine aminotr 98.9 2.1E-06 4.4E-11 84.1 27.1 310 117-473 16-362 (364)
370 TIGR03811 tyr_de_CO2_Ent tyros 98.8 3.3E-06 7.1E-11 88.1 25.4 231 137-387 121-475 (608)
371 COG0403 GcvP Glycine cleavage 98.8 1.3E-05 2.8E-10 77.6 27.0 282 143-471 124-448 (450)
372 COG1982 LdcC Arginine/lysine/o 98.7 4.5E-06 9.8E-11 84.5 23.4 128 142-289 73-204 (557)
373 PRK05367 glycine dehydrogenase 98.7 5.6E-06 1.2E-10 90.9 25.9 274 142-468 124-437 (954)
374 KOG0629 Glutamate decarboxylas 98.5 7.4E-06 1.6E-10 78.8 17.9 308 141-473 143-509 (510)
375 PF02347 GDC-P: Glycine cleava 98.5 1.3E-05 2.8E-10 79.6 19.3 278 141-467 112-429 (429)
376 COG3033 TnaA Tryptophanase [Am 98.4 0.00016 3.5E-09 68.4 23.8 313 138-472 78-443 (471)
377 PF03841 SelA: L-seryl-tRNA se 98.4 4.9E-07 1.1E-11 86.7 7.1 226 111-365 11-260 (367)
378 PF06838 Met_gamma_lyase: Meth 98.4 4.4E-05 9.6E-10 72.7 19.3 200 116-336 25-246 (403)
379 KOG2040 Glycine dehydrogenase 98.4 8E-05 1.7E-09 75.2 21.5 298 139-472 582-917 (1001)
380 TIGR00461 gcvP glycine dehydro 98.3 0.00038 8.2E-09 75.7 27.6 272 142-468 112-426 (939)
381 KOG1412 Aspartate aminotransfe 98.3 3.5E-05 7.7E-10 71.3 15.6 273 160-473 104-405 (410)
382 KOG1411 Aspartate aminotransfe 98.1 0.0001 2.2E-09 69.3 15.6 206 82-325 52-285 (427)
383 PF05889 SLA_LP_auto_ag: Solub 98.1 0.00055 1.2E-08 66.6 19.2 302 141-472 58-389 (389)
384 KOG1383 Glutamate decarboxylas 98.1 0.00046 9.9E-09 67.7 18.6 334 96-473 76-446 (491)
385 PF04864 Alliinase_C: Allinase 97.9 0.00019 4.2E-09 68.0 13.1 194 246-470 138-362 (363)
386 KOG3846 L-kynurenine hydrolase 97.8 0.0043 9.2E-08 57.7 19.7 330 111-473 74-461 (465)
387 PRK12566 glycine dehydrogenase 97.6 0.039 8.4E-07 60.3 25.3 299 111-468 87-439 (954)
388 KOG2467 Glycine/serine hydroxy 97.4 0.032 6.9E-07 53.4 20.0 277 161-472 112-425 (477)
389 COG4100 Cystathionine beta-lya 97.3 0.037 8.1E-07 51.5 18.6 197 116-336 36-257 (416)
390 KOG0628 Aromatic-L-amino-acid/ 97.3 0.1 2.2E-06 51.7 22.2 137 138-291 112-276 (511)
391 COG1932 SerC Phosphoserine ami 97.2 0.18 4E-06 48.6 22.4 197 247-473 145-363 (365)
392 PLN02994 1-aminocyclopropane-1 96.7 0.0097 2.1E-07 51.0 8.6 73 118-193 76-153 (153)
393 KOG3843 Predicted serine hydro 92.3 0.5 1.1E-05 43.4 7.0 55 232-289 142-196 (432)
394 KOG2040 Glycine dehydrogenase 88.4 36 0.00079 35.9 18.1 100 157-285 182-281 (1001)
395 PF12138 Spherulin4: Spherulat 73.3 13 0.00029 34.7 7.2 89 233-328 18-113 (253)
396 PRK05782 bifunctional sirohydr 66.6 99 0.0022 30.2 11.7 44 319-363 287-332 (335)
397 cd01393 recA_like RecA is a b 64.0 67 0.0015 29.1 9.9 61 225-285 88-164 (226)
398 PF13481 AAA_25: AAA domain; P 57.4 22 0.00048 31.3 5.3 53 232-285 128-184 (193)
399 PLN02672 methionine S-methyltr 55.3 1.5E+02 0.0032 34.1 12.0 130 139-289 430-566 (1082)
400 COG1105 FruK Fructose-1-phosph 52.1 37 0.0008 32.7 6.0 37 249-289 132-168 (310)
401 KOG2433 Uncharacterized conser 51.6 48 0.001 32.6 6.6 59 116-178 434-498 (577)
402 PF03652 UPF0081: Uncharacteri 50.2 83 0.0018 26.2 7.2 57 232-290 39-98 (135)
403 cd01822 Lysophospholipase_L1_l 46.9 1.6E+02 0.0034 25.1 9.0 38 246-284 101-139 (177)
404 cd01840 SGNH_hydrolase_yrhL_li 45.5 1.8E+02 0.0039 24.3 12.2 50 233-286 66-115 (150)
405 cd01121 Sms Sms (bacterial rad 43.1 46 0.001 33.1 5.4 58 226-285 140-205 (372)
406 smart00642 Aamy Alpha-amylase 42.6 71 0.0015 27.7 5.9 57 232-290 17-93 (166)
407 cd03315 MLE_like Muconate lact 42.4 2.9E+02 0.0063 25.8 11.5 144 118-286 87-237 (265)
408 KOG1465 Translation initiation 42.1 3.2E+02 0.007 26.2 13.0 106 154-286 161-270 (353)
409 COG0352 ThiE Thiamine monophos 41.3 61 0.0013 29.4 5.4 95 233-336 24-121 (211)
410 COG1066 Sms Predicted ATP-depe 40.9 61 0.0013 32.5 5.6 59 224-284 148-214 (456)
411 COG0742 N6-adenine-specific me 40.2 87 0.0019 27.8 6.0 83 95-192 41-125 (187)
412 PF05621 TniB: Bacterial TniB 39.8 17 0.00037 34.7 1.7 120 238-362 139-271 (302)
413 cd03324 rTSbeta_L-fuconate_deh 39.5 4.2E+02 0.0091 26.8 11.8 150 114-285 194-350 (415)
414 PF13167 GTP-bdg_N: GTP-bindin 39.0 1.5E+02 0.0033 23.0 6.5 58 232-290 9-68 (95)
415 COG0108 RibB 3,4-dihydroxy-2-b 38.9 74 0.0016 28.4 5.3 35 246-285 156-190 (203)
416 cd01123 Rad51_DMC1_radA Rad51_ 38.9 1.7E+02 0.0037 26.5 8.3 52 237-289 107-170 (235)
417 cd07571 ALP_N-acyl_transferase 38.8 71 0.0015 30.1 5.8 38 248-285 40-77 (270)
418 PF02677 DUF208: Uncharacteriz 38.3 74 0.0016 27.9 5.2 48 234-289 13-63 (176)
419 KOG3974 Predicted sugar kinase 37.2 52 0.0011 30.6 4.2 49 232-287 91-139 (306)
420 cd03328 MR_like_3 Mandelate ra 36.3 3.3E+02 0.0072 26.8 10.3 145 118-285 140-291 (352)
421 cd04920 ACT_AKiii-DAPDC_2 ACT 36.0 86 0.0019 21.9 4.5 45 427-471 17-61 (63)
422 COG2515 Acd 1-aminocyclopropan 35.6 3.6E+02 0.0078 26.0 9.5 40 250-291 245-284 (323)
423 cd03319 L-Ala-DL-Glu_epimerase 33.7 4.4E+02 0.0095 25.3 11.8 144 117-286 135-285 (316)
424 cd03316 MR_like Mandelate race 33.0 4.8E+02 0.01 25.5 11.1 144 117-285 140-296 (357)
425 cd03320 OSBS o-Succinylbenzoat 32.5 4.2E+02 0.0091 24.7 10.5 147 113-286 79-233 (263)
426 TIGR02012 tigrfam_recA protein 31.4 3E+02 0.0065 26.8 8.7 52 236-289 125-192 (321)
427 PF06153 DUF970: Protein of un 31.3 66 0.0014 25.7 3.4 48 425-472 11-65 (109)
428 TIGR00416 sms DNA repair prote 31.2 1E+02 0.0022 31.7 5.8 57 226-284 152-216 (454)
429 TIGR00789 flhB_rel flhB C-term 30.9 40 0.00087 25.4 2.1 22 269-290 29-50 (82)
430 PF13872 AAA_34: P-loop contai 30.1 33 0.00072 32.8 1.9 22 269-290 161-183 (303)
431 cd04937 ACT_AKi-DapG-BS_2 ACT 29.9 1.2E+02 0.0025 21.2 4.4 46 427-472 18-63 (64)
432 cd01821 Rhamnogalacturan_acety 29.4 1.3E+02 0.0029 26.4 5.7 39 246-284 107-150 (198)
433 KOG1564 DNA repair protein RHP 29.2 3.6E+02 0.0078 25.8 8.3 64 222-285 177-258 (351)
434 cd04915 ACT_AK-Ectoine_2 ACT d 29.0 1.4E+02 0.003 21.2 4.6 46 426-471 17-64 (66)
435 cd07576 R-amidase_like Pseudom 28.8 75 0.0016 29.3 4.1 53 233-285 18-80 (254)
436 PHA00008 J DNA packaging prote 28.7 36 0.00078 18.9 1.1 16 86-101 10-25 (26)
437 cd00984 DnaB_C DnaB helicase C 28.7 1.4E+02 0.0031 27.2 6.0 54 232-285 107-168 (242)
438 cd01422 MGS Methylglyoxal synt 28.7 2E+02 0.0043 23.1 6.0 46 234-285 60-106 (115)
439 PF00154 RecA: recA bacterial 28.5 4.4E+02 0.0096 25.7 9.3 109 159-285 58-185 (322)
440 PF00926 DHBP_synthase: 3,4-di 28.4 1.4E+02 0.0031 26.6 5.5 35 246-285 152-186 (194)
441 COG3392 Adenine-specific DNA m 28.2 5.1E+02 0.011 24.4 9.2 55 233-296 259-313 (330)
442 TIGR03573 WbuX N-acetyl sugar 28.1 5.8E+02 0.013 25.0 12.1 38 155-192 60-97 (343)
443 PRK11823 DNA repair protein Ra 28.0 1.2E+02 0.0027 31.0 5.7 55 229-285 141-203 (446)
444 cd01827 sialate_O-acetylestera 27.9 1.2E+02 0.0026 26.3 5.1 40 245-284 107-152 (188)
445 PRK13602 putative ribosomal pr 27.7 2.6E+02 0.0057 20.9 6.1 45 233-287 16-60 (82)
446 KOG2792 Putative cytochrome C 27.6 1.6E+02 0.0035 27.4 5.7 82 92-176 123-223 (280)
447 cd00983 recA RecA is a bacter 27.4 3.5E+02 0.0076 26.4 8.4 45 246-290 133-193 (325)
448 TIGR00506 ribB 3,4-dihydroxy-2 26.9 1.7E+02 0.0037 26.2 5.7 35 246-285 157-191 (199)
449 cd07581 nitrilase_3 Uncharacte 26.5 74 0.0016 29.4 3.6 53 233-285 16-79 (255)
450 cd04923 ACT_AK-LysC-DapG-like_ 26.4 1.4E+02 0.003 20.2 4.2 45 427-471 17-61 (63)
451 smart00545 JmjN Small domain f 25.9 86 0.0019 20.3 2.7 22 264-285 14-35 (42)
452 PRK06371 translation initiatio 25.7 6.4E+02 0.014 24.7 9.8 38 246-285 215-254 (329)
453 PRK09354 recA recombinase A; P 25.6 4.9E+02 0.011 25.7 9.1 53 236-290 130-198 (349)
454 PRK08535 translation initiatio 25.4 6.2E+02 0.013 24.4 11.7 139 117-285 85-227 (310)
455 PRK05703 flhF flagellar biosyn 25.3 7.2E+02 0.016 25.3 10.6 148 117-289 176-342 (424)
456 cd04917 ACT_AKiii-LysC-EC_2 AC 25.3 1.8E+02 0.0039 20.1 4.7 44 428-471 19-62 (64)
457 PF04726 Microvir_J: Microviru 24.9 30 0.00065 18.7 0.4 16 86-101 9-24 (24)
458 PF07085 DRTGG: DRTGG domain; 24.8 2.1E+02 0.0046 22.3 5.5 48 225-285 43-90 (105)
459 cd04936 ACT_AKii-LysC-BS-like_ 24.8 1.5E+02 0.0033 20.0 4.2 45 427-471 17-61 (63)
460 COG1625 Fe-S oxidoreductase, r 24.3 2.4E+02 0.0053 28.3 6.7 55 225-279 181-244 (414)
461 COG4948 L-alanine-DL-glutamate 24.2 5.5E+02 0.012 25.3 9.6 122 140-284 173-294 (372)
462 COG2870 RfaE ADP-heptose synth 23.9 1.2E+02 0.0026 30.3 4.4 41 246-292 143-183 (467)
463 cd03325 D-galactonate_dehydrat 23.7 6.2E+02 0.014 24.8 9.7 119 142-285 163-283 (352)
464 PRK05234 mgsA methylglyoxal sy 23.4 2.1E+02 0.0045 24.1 5.4 46 235-286 66-112 (142)
465 cd07578 nitrilase_1_R1 First n 23.4 1.2E+02 0.0027 28.1 4.5 53 233-285 19-83 (258)
466 PF13401 AAA_22: AAA domain; P 23.4 88 0.0019 25.2 3.2 27 264-290 71-98 (131)
467 cd07579 nitrilase_1_R2 Second 23.2 92 0.002 29.5 3.6 53 233-285 17-76 (279)
468 PLN02446 (5-phosphoribosyl)-5- 23.1 6.4E+02 0.014 23.8 10.9 48 232-285 164-212 (262)
469 PF02603 Hpr_kinase_N: HPr Ser 23.0 77 0.0017 26.0 2.7 38 235-285 73-110 (127)
470 cd07567 biotinidase_like bioti 23.0 1.2E+02 0.0026 29.2 4.3 19 267-285 88-106 (299)
471 PRK10076 pyruvate formate lyas 23.0 37 0.00081 30.8 0.8 144 311-469 7-156 (213)
472 PRK03892 ribonuclease P protei 22.9 5.7E+02 0.012 23.1 9.4 62 246-317 130-195 (216)
473 PRK08335 translation initiatio 22.6 6.7E+02 0.014 23.8 11.0 116 142-285 97-216 (275)
474 cd04918 ACT_AK1-AT_2 ACT domai 22.5 2E+02 0.0044 20.0 4.5 45 427-471 17-63 (65)
475 cd04922 ACT_AKi-HSDH-ThrA_2 AC 22.5 2.1E+02 0.0045 19.6 4.6 46 426-471 17-64 (66)
476 COG4799 Acetyl-CoA carboxylase 22.4 1.4E+02 0.0031 31.0 4.9 47 246-292 324-371 (526)
477 PF07905 PucR: Purine cataboli 22.4 1.7E+02 0.0037 23.8 4.6 47 232-285 57-104 (123)
478 cd01836 FeeA_FeeB_like SGNH_hy 21.7 5.2E+02 0.011 22.2 10.6 18 267-284 137-155 (191)
479 TIGR03853 matur_matur probable 21.6 1.2E+02 0.0026 22.5 3.0 48 141-191 20-67 (77)
480 TIGR02236 recomb_radA DNA repa 21.5 1.7E+02 0.0038 28.1 5.2 58 233-290 179-248 (310)
481 cd03321 mandelate_racemase Man 21.5 7.7E+02 0.017 24.1 10.6 143 117-284 142-292 (355)
482 PF04914 DltD_C: DltD C-termin 21.5 52 0.0011 27.3 1.3 58 230-289 35-97 (130)
483 KOG0352 ATP-dependent DNA heli 21.4 3.3E+02 0.0072 27.6 6.9 75 243-333 110-192 (641)
484 cd01834 SGNH_hydrolase_like_2 21.4 2E+02 0.0044 24.7 5.3 39 246-284 104-151 (191)
485 PRK00910 ribB 3,4-dihydroxy-2- 21.4 2.9E+02 0.0062 25.2 6.1 35 246-285 168-202 (218)
486 PRK11889 flhF flagellar biosyn 21.3 8.8E+02 0.019 24.7 10.8 152 117-289 193-362 (436)
487 COG3155 ElbB Uncharacterized p 21.2 62 0.0013 27.6 1.7 34 303-336 111-145 (217)
488 PRK00014 ribB 3,4-dihydroxy-2- 21.2 2.5E+02 0.0054 25.8 5.7 39 246-289 172-211 (230)
489 PF03853 YjeF_N: YjeF-related 21.1 2.2E+02 0.0048 24.6 5.3 63 247-313 99-164 (169)
490 PF00549 Ligase_CoA: CoA-ligas 20.9 35 0.00076 29.2 0.2 30 233-264 62-91 (153)
491 TIGR00140 hupD hydrogenase exp 20.9 4.7E+02 0.01 21.3 7.9 47 143-193 2-48 (134)
492 PF10087 DUF2325: Uncharacteri 20.8 1.7E+02 0.0036 22.6 4.1 41 234-285 40-80 (97)
493 TIGR03018 pepcterm_TyrKin exop 20.7 6E+02 0.013 22.5 9.6 37 157-193 37-77 (207)
494 PRK14017 galactonate dehydrata 20.7 6.6E+02 0.014 24.9 9.3 119 142-285 164-284 (382)
495 cd00953 KDG_aldolase KDG (2-ke 20.6 7.1E+02 0.015 23.5 9.1 52 138-193 51-104 (279)
496 PF02844 GARS_N: Phosphoribosy 20.5 4.3E+02 0.0093 20.8 8.0 47 226-284 44-90 (100)
497 cd01444 GlpE_ST GlpE sulfurtra 20.3 2.1E+02 0.0046 21.4 4.6 38 154-193 56-93 (96)
498 PF10678 DUF2492: Protein of u 20.1 1.2E+02 0.0026 22.6 2.8 48 141-191 22-69 (78)
No 1
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=5.4e-90 Score=659.53 Aligned_cols=426 Identities=58% Similarity=1.006 Sum_probs=410.6
Q ss_pred CchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHH
Q 011959 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM 128 (474)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~ 128 (474)
..++|+++++++++++|+|+++++|.|++++.+|+++++++|+|+||+|||+||||+++|++..|||+||.|++|+++|+
T Consensus 3 ~~~~S~~l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l 82 (432)
T COG0001 3 QFPKSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQL 82 (432)
T ss_pred CccchHHHHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHH
Confidence 46789999999999999999999999999988899999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCcc
Q 011959 129 KKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT 208 (474)
Q Consensus 129 ~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~ 208 (474)
++|..|+.|++.+.++|+.+++++|..|+|.|+||||||++.|||+||++|+|++||.|+++|||+.+..+...|++...
T Consensus 83 ~~G~~fg~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t 162 (432)
T COG0001 83 ERGLSFGAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAAT 162 (432)
T ss_pred HhcCCCCCCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCccc
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999999988887
Q ss_pred CCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011959 209 LGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (474)
Q Consensus 209 ~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (474)
...|.++|+|.....+++.+||||+++++++++++++++|+||+||+.+|.|.+.|.++||++|++||++||++||+|||
T Consensus 163 ~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEV 242 (432)
T COG0001 163 LGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEV 242 (432)
T ss_pred CCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 77799999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-C
Q 011959 289 MTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-P 367 (474)
Q Consensus 289 ~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~ 367 (474)
+||||....+++++||++||++||+|.+|||+|+|++.+++++|+.+.+.++.++.+|+++||++++|++++|+.+.+ +
T Consensus 243 iTGFR~~~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~ 322 (432)
T COG0001 243 ITGFRVALGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEE 322 (432)
T ss_pred hhhcccCCcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcc
Confidence 999998888999999999999999999999999999999999999999888999999999999999999999999987 5
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCc
Q 011959 368 GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE 447 (474)
Q Consensus 368 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~ 447 (474)
..++++.+.+++|++.|++...++++...+...|.|+.+.|.+..+.++.+....+.+.+.++.+.|+++||++.|+.+.
T Consensus 323 ~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~e 402 (432)
T COG0001 323 GVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFE 402 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCcccc
Confidence 68999999999999999999999999999999999999999988899999988888888888888999999999999988
Q ss_pred ceEEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 448 AGFTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 448 ~~~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
..+++..||+++||+++++++++++++
T Consensus 403 a~flS~ahte~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 403 AGFLSTAHTEEDIDRTLEAADEAFKEL 429 (432)
T ss_pred ceeeecccCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999998763
No 2
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=1.8e-81 Score=633.76 Aligned_cols=441 Identities=84% Similarity=1.352 Sum_probs=388.7
Q ss_pred cccccceeeeccccCCCchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhcc
Q 011959 33 CSVKMSVSVEEQRKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAI 112 (474)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~ 112 (474)
+++++.+++.+ .+.+.+++|+++++++++++|+|+++++|.|.+.+++|+++++++|+|+||.|||+||||.+++++++
T Consensus 34 ~~~~~~~~~~~-~~~~~~~~S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~ 112 (474)
T PLN02482 34 SVIKMAVSVEE-KKKFTTTKSEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAI 112 (474)
T ss_pred chhhhhhhccc-cccCCChHHHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccc
Confidence 45666666654 45667889999999999999999999999887776779999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCC
Q 011959 113 IGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (474)
Q Consensus 113 lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (474)
+||+||+|.+|+++|++++..++.+++.+.+|+++|++..|+.++++|+|||+||++.|+|+||++|+|.+||.++++||
T Consensus 113 lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YH 192 (474)
T PLN02482 113 IGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYH 192 (474)
T ss_pred cCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccC
Confidence 99999999999999999988778889999999999999998889999999999999999999999999999999999999
Q ss_pred CCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHH
Q 011959 193 GHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 272 (474)
Q Consensus 193 g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l 272 (474)
|+++..+...+.+......+..++++.....+++.+||||+++++++++++++++++||+||+++++|.+.|+++||++|
T Consensus 193 G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~l 272 (474)
T PLN02482 193 GHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGL 272 (474)
T ss_pred CCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHH
Confidence 99987776654433322235556666655667889999999999999987778899999999999999999999999999
Q ss_pred HHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChH
Q 011959 273 RRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPL 352 (474)
Q Consensus 273 ~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~ 352 (474)
+++|++||++||+|||++|||+|.+++++++|+.||++||||+++||+|+|++++++++++.+.+.++.++++||++||+
T Consensus 273 r~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl 352 (474)
T PLN02482 273 REITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPL 352 (474)
T ss_pred HHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEEEecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcchhHH
Confidence 99999999999999999999888889999999999999999999999999999999999999875445678899999999
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHH
Q 011959 353 AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 432 (474)
Q Consensus 353 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (474)
+|++++++|++++++++++++++++++|+++|+++..+++++..+.+.+.|++++|..++..++.+...++......+.+
T Consensus 353 ~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~ 432 (474)
T PLN02482 353 AMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHR 432 (474)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHH
Confidence 99999999999988899999999999999999999888765544444455889999876665655555556666778999
Q ss_pred HHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 433 GMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 433 ~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
.|+++||++.+.+.+..++++.||++|||+++++++++++++
T Consensus 433 ~l~~~Gv~~~~~~~~~~~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 433 GMLEEGVYLAPSQFEAGFTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred HHHHCCeEEeccCCCCCcCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 999999999987654446899999999999999999999865
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-81 Score=590.08 Aligned_cols=368 Identities=33% Similarity=0.481 Sum_probs=339.0
Q ss_pred CCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHhhCCCCC
Q 011959 79 GGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIE 156 (474)
Q Consensus 79 ~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~~~~ 156 (474)
++.|+++++|+|+|+||.+|++||||.+|+++++|||+||.+++|+++|+++.. +..+.++...+|+++|++..|..+
T Consensus 22 ~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~~~d 101 (404)
T COG4992 22 GRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSPFAD 101 (404)
T ss_pred CcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCcccc
Confidence 335899999999999999999999999999999999999999999999999954 345789999999999999996689
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhcC---CcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEccCCC
Q 011959 157 MVRFVNSGTEACMGVLRLARAFTG---RERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFND 232 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~d 232 (474)
+|+|+|||+||||+|||+||.+++ +.+||.|+++|||++.++++.++...+..++ |..+ .+..+||||
T Consensus 102 ~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~--------g~~~vpfnD 173 (404)
T COG4992 102 RVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLP--------GFRHVPFND 173 (404)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCC--------CceecCCCC
Confidence 999999999999999999999997 7899999999999999999999987554333 3333 378899999
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceee
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t 311 (474)
++++++++.+ ++++||+||+||++|+++++++||+++++||++||++||+||||||+ |+|++|+++|+|+.|||+|
T Consensus 174 i~al~~ai~~---~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~t 250 (404)
T COG4992 174 IEALEAAIDE---DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILT 250 (404)
T ss_pred HHHHHHHhcc---CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEE
Confidence 9999999985 89999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 312 ~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
++|+||||+|+|++++++++.+.+. +..|++||++||++|+++.++|+.+.++++.+++++.+++|+++|+++..++
T Consensus 251 laK~LgGG~PigA~la~~~~~~~~~---~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~ 327 (404)
T COG4992 251 LAKALGGGFPIGAMLATEEIASAFT---PGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRY 327 (404)
T ss_pred eeccccCCccceeeEEchhhhhcCC---CCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999977777776 6779999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHH
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~ 469 (474)
+++.++||.|+|+++++..+. ....+.+.|.++|+++.+.+.+.+|+ ++.+|+|++++++++|++
T Consensus 328 ~~v~~vRG~GLmiGiel~~~~-------------~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~~ 394 (404)
T COG4992 328 PLVKEVRGRGLMIGIELKEPY-------------RARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDALER 394 (404)
T ss_pred CceeeeecceeEEEEEecCcc-------------cHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHHHHHH
Confidence 989999999999999996531 23678999999999999998887776 799999999999999999
Q ss_pred HHhh
Q 011959 470 VLRQ 473 (474)
Q Consensus 470 ~~~~ 473 (474)
+++.
T Consensus 395 ~l~~ 398 (404)
T COG4992 395 ALAA 398 (404)
T ss_pred HHHH
Confidence 9874
No 4
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-77 Score=581.29 Aligned_cols=409 Identities=30% Similarity=0.443 Sum_probs=351.2
Q ss_pred CCchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHH
Q 011959 48 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 127 (474)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~ 127 (474)
...++..++.++.+++++.++... ..|+++++++|+|+||+|||+||||.+++++.++||+||.|++|+++|
T Consensus 13 ~~~~~~~~~~~r~~~~~~r~~~~~--------~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q 84 (447)
T COG0160 13 APGPKALELIERREEALARSYGRF--------RFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQ 84 (447)
T ss_pred CCCcchHHHHHHHHHHhccccccc--------cCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHH
Confidence 345566778888888777655431 249999999999999999999999999999999999999999999999
Q ss_pred HHhcC--CCCC-CCHHHHHHHHHHHhhCCC--CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhc
Q 011959 128 MKKGT--SFGA-PCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKA 202 (474)
Q Consensus 128 ~~~~~--~~~~-~~~~~~~la~~l~~~~~~--~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~ 202 (474)
+++.. ++.+ +.+...+++|+|.+..|+ .++++|+|||+||||.|||+||.+|++..||.|.++|||.+.++++++
T Consensus 85 ~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT 164 (447)
T COG0160 85 LAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLT 164 (447)
T ss_pred HHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhc
Confidence 99854 3333 348899999999999994 789999999999999999999999999999999999999999999999
Q ss_pred CCCCcc-CCC-CCCCCCCCCCCCceEEccCC---------CHHHHHHHHhc---CCCCeEEEEEccccCCCCcccCCHHH
Q 011959 203 GSGVAT-LGL-PDSPGVPKGATYETLTAPFN---------DVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDF 268 (474)
Q Consensus 203 g~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~---------d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~ 268 (474)
+..... ..+ |..+++.+....+.++.|+. ..+.+++.+.. .+.++|+||+||+|+++|.+.||++|
T Consensus 165 ~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~f 244 (447)
T COG0160 165 GSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGF 244 (447)
T ss_pred cCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHH
Confidence 875432 111 22233333333334444432 13446664432 45689999999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCC
Q 011959 269 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 347 (474)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~ 347 (474)
|++|+++|+|||++||+||||+|| |+|++|+++|+|+.|||+|+||++++|+|+|++++++++++ .. +..+.+||
T Consensus 245 l~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~---~g~~~~Tf 320 (447)
T COG0160 245 LKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WP---PGGHGGTF 320 (447)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCCceeEEeccHHhcc-cC---CcccCCCC
Confidence 999999999999999999999999 99999999999999999999999999999999999999999 44 45688899
Q ss_pred CCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHH
Q 011959 348 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 427 (474)
Q Consensus 348 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 427 (474)
++||++|++++++|+.++++++.++..+.+++++++|.++..+++.+.+|||.|+|++++|.++. ..+.|+.+..
T Consensus 321 ~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~-----~t~~p~~~~~ 395 (447)
T COG0160 321 GGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDR-----DTKEPDAELA 395 (447)
T ss_pred CcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCC-----CCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998653 2344778889
Q ss_pred HHHHHHHHHCCeEecccC--CcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 428 ARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 428 ~~~~~~l~~~Gv~v~~~~--~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.++.+.|+++|+++...+ .+.+++ ++++|+|++|+++++|++++++
T Consensus 396 ~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 396 AKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred HHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 999999999999988887 455555 7999999999999999999876
No 5
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.1e-74 Score=583.67 Aligned_cols=425 Identities=50% Similarity=0.897 Sum_probs=372.1
Q ss_pred CchhHHHHHHHHhhhCCCCCCCccccccccC-CCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHH
Q 011959 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 127 (474)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~ 127 (474)
.+++|.++++++++++|+|+++++|.+...+ ..|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|
T Consensus 2 ~~~~s~~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q 81 (428)
T PRK12389 2 NFTKSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEA 81 (428)
T ss_pred CChhhHHHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHH
Confidence 4578999999999999999998888775443 458999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCc
Q 011959 128 MKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVA 207 (474)
Q Consensus 128 ~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~ 207 (474)
++++..++.+++...+|+++|.+..|+.++++|++||+||++.|+|+||.+++|.+||.++++|||+++++++.++....
T Consensus 82 ~~~~~~~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~ 161 (428)
T PRK12389 82 AENGVLYGTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPS 161 (428)
T ss_pred HHhCCccCCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCccc
Confidence 99876667788999999999999998788999999999999999999999999999999999999999999988875433
Q ss_pred cCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 011959 208 TLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287 (474)
Q Consensus 208 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DE 287 (474)
....|...+++.....+++.+|+||++.+++.++++++++++||+||+++++|.+.|+++||++|+++|++||++||+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DE 241 (428)
T PRK12389 162 TLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDE 241 (428)
T ss_pred ccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 22223334444444457889999999999999987777899999999999999999999999999999999999999999
Q ss_pred cccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCC
Q 011959 288 VMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP 367 (474)
Q Consensus 288 v~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 367 (474)
|++|||++.+++++++|+.||++|+||++++|+|+|++++++++++.+...+..++++||++||++|++++++|++++++
T Consensus 242 V~tG~Rt~~~~a~~~~gv~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~ 321 (428)
T PRK12389 242 VITAFRFMYGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE 321 (428)
T ss_pred cccccccCcchhhHHhCCCCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc
Confidence 99999888778888999999999999999999999999999999999864334578899999999999999999999888
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhhcCCeeEE-eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC
Q 011959 368 GTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF 446 (474)
Q Consensus 368 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 446 (474)
++++++++++++|+++|+++..+++++.++ ++.| +++++|..++..++.....++......+.+.|+++||++.+.+.
T Consensus 322 ~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~ 400 (428)
T PRK12389 322 GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY 400 (428)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC
Confidence 999999999999999999988888888887 5556 88999976544333222223445567889999999999998766
Q ss_pred cceEEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 447 EAGFTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 447 ~~~~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
+.+++++++|++||++++++++++++++
T Consensus 401 ~~~~~~l~~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 401 EAWFLTTAHTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred CCeeecCCCCHHHHHHHHHHHHHHHHhC
Confidence 6677899999999999999999999764
No 6
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.1e-72 Score=565.92 Aligned_cols=420 Identities=39% Similarity=0.656 Sum_probs=364.9
Q ss_pred chhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHH
Q 011959 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 129 (474)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~ 129 (474)
.++|.++++++++++|+|+++..|.|...+.+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++
T Consensus 4 ~~~s~~l~~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~ 83 (433)
T PRK00615 4 IQEMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAE 83 (433)
T ss_pred cHHHHHHHHHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999987666667999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCHHHHHHHHHHHhhCCC-CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchh---HHHhcCCC
Q 011959 130 KGTSFGAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP---FLVKAGSG 205 (474)
Q Consensus 130 ~~~~~~~~~~~~~~la~~l~~~~~~-~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~---~~~~~g~~ 205 (474)
++..++.+++...+|+++|.+..|. .++|+|++||+||++.|+|+||.+++|.+||.++++|||++++ .+..++..
T Consensus 84 ~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~ 163 (433)
T PRK00615 84 RGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETS 163 (433)
T ss_pred hCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCC
Confidence 8877777888999999999999974 5799999999999999999999999999999999999999844 33333321
Q ss_pred CccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 206 VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 206 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
... .+...+ +.........++|||++++++.++++++++++||+||+++++|.+.|+++|+++|+++|++||++||+
T Consensus 164 ~~~--~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~ 240 (433)
T PRK00615 164 LDT--LTHLVD-TDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIM 240 (433)
T ss_pred cCc--CCCCCC-CCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 100 011111 11122345778999999999999876678999999999999999999999999999999999999999
Q ss_pred eccccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhc
Q 011959 286 DEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 365 (474)
Q Consensus 286 DEv~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 365 (474)
||||+|||+|.+++++++|+.||++||||++++|+|+|++++++++++.+......++++||++||++|++++++|++++
T Consensus 241 DEv~tG~R~G~~ga~~~~gv~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~ 320 (433)
T PRK00615 241 DEVVTGFRVAQGGAAAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCR 320 (433)
T ss_pred EcccccccccHhHHHHhcCCCCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHh
Confidence 99999998898999999999999999999999999999999999999998644455678899999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhcCC-eeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEeccc
Q 011959 366 EPGTYEYLNKITGELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS 444 (474)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 444 (474)
++++++++++++++|+++|+++..+.++ +..++ .|+|++++|.+.+.+++.+....+......+.+.|+++||++.+.
T Consensus 321 ~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 399 (433)
T PRK00615 321 EQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPS 399 (433)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCc
Confidence 8889999999999999999998777554 44566 899999999876655565555556666788999999999999988
Q ss_pred CCcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 445 QFEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 445 ~~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.++...++..||++|||++++++++++++
T Consensus 400 ~~~~~~ls~~ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 400 PFEASFLSSAHSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred cccccceecCCCHHHHHHHHHHHHHHHHH
Confidence 76666789999999999999999999875
No 7
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=1.1e-71 Score=562.30 Aligned_cols=418 Identities=28% Similarity=0.411 Sum_probs=357.8
Q ss_pred CchhHHHHHHHHhhhCCCCC-CCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHH
Q 011959 49 TLKKSEEAFNVAKELMPGGV-NSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 127 (474)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~ 127 (474)
..++|.++++++++++|+|+ ++..+.+. ..+|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|
T Consensus 26 ~~~~S~~l~~ra~~~~p~g~~~~~~~~~~--~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q 103 (453)
T PRK07046 26 AHPRSRALAARAAQHLLGGVPMHWMNDWP--TPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQ 103 (453)
T ss_pred cChhhHHHHHHHHhhCCCCcccccccccC--CCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHH
Confidence 56789999999999999999 44444442 1359999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCc
Q 011959 128 MKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVA 207 (474)
Q Consensus 128 ~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~ 207 (474)
++++..++.+++.+.+|+++|++.++ .++++|+|||+||++.|+|+||++|+|++||.|+++|||++++++.....+.
T Consensus 104 ~~~~~~~~~~~~~~~~lAe~l~~~~~-~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~- 181 (453)
T PRK07046 104 ARRGLTTMLPSEDAAWVGEELARRFG-LPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGR- 181 (453)
T ss_pred HHhCCCCCCCCHHHHHHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCC-
Confidence 99987777889999999999999984 8999999999999999999999999999999999999999988776432111
Q ss_pred cCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 011959 208 TLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287 (474)
Q Consensus 208 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DE 287 (474)
....+...+++.....+++.+||||++++++++. ++++++||+||+++++|.++|+++||++|+++|++||++||+||
T Consensus 182 ~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~--~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DE 259 (453)
T PRK07046 182 PVQRPGLLGQVHDLTATTRVVEFNDLAALEAALA--DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDE 259 (453)
T ss_pred CCCCCCCCCCCccccCceEeeCCCCHHHHHHHhC--CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEc
Confidence 0011223344444445678899999999999995 35899999999999999999999999999999999999999999
Q ss_pred cccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcC------CCCcccccCCCCChHHHHHHHHHH
Q 011959 288 VMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP------AGPMYQAGTLSGNPLAMTAGIHTL 361 (474)
Q Consensus 288 v~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~------~~~~~~~~t~~~~~~~~aaa~aal 361 (474)
|++ ||.|..+.++++|+.||++||||+++||+|+|++++++++++.+.+ .+...+.+||++||++|++++++|
T Consensus 260 V~t-fr~g~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L 338 (453)
T PRK07046 260 THT-ISSGPGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATL 338 (453)
T ss_pred ccc-CccCCcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHH
Confidence 999 7766666778899999999999999999999999999999998863 123457889999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCccccccc-chHHHHHHHHHHHHCCeE
Q 011959 362 KRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS-ETTKFARFYRGMLEEGVY 440 (474)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Gv~ 440 (474)
++++++++++++++++++|+++|+++..+++++..+++.|+++.++|.+++..++.+...+ +......+...|+++||+
T Consensus 339 ~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~ 418 (453)
T PRK07046 339 AEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVL 418 (453)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCE
Confidence 9998889999999999999999999988899999999999999999865544444333322 445567788999999999
Q ss_pred ecccCCcceEEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 441 FAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 441 v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
+.+.+ +.++++..||++|||+++++++++++++
T Consensus 419 ~~~~~-~~~~~~p~~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 419 ITPFH-NMMLVCPATTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred Eeccc-CcEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 98753 4456777899999999999999998763
No 8
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=5e-69 Score=545.23 Aligned_cols=423 Identities=60% Similarity=1.007 Sum_probs=366.1
Q ss_pred hHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc
Q 011959 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG 131 (474)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~ 131 (474)
+|+++++++++++|+|++..+|.+...+..|+++.+++|+|+||.|||+||||.+|+++.++||+||+|++|+++|++++
T Consensus 1 ~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~ 80 (423)
T TIGR00713 1 KSENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG 80 (423)
T ss_pred CcHHHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhC
Confidence 47899999999999999988887755555699999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC
Q 011959 132 TSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 211 (474)
Q Consensus 132 ~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~ 211 (474)
..++.+++...+|+++|++.+|..++|+|++||+||++.|+|+||.++++++||.++++|||++...+..++.+......
T Consensus 81 ~~~~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 160 (423)
T TIGR00713 81 TSYGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGL 160 (423)
T ss_pred CcCCCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCC
Confidence 76667888899999999999986789999999999999999999999999999999999999988888766543322222
Q ss_pred CCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011959 212 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291 (474)
Q Consensus 212 ~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (474)
+..++++.......+.+|++|+++++++++++++++++||+||+++++|.+.++++|+++|+++|++||++||+||||+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g 240 (423)
T TIGR00713 161 PTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTG 240 (423)
T ss_pred CCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccc
Confidence 33344444444567888999999999999866568999999999999999999899999999999999999999999999
Q ss_pred cccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 292 FRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 292 ~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
||+|..+..+++++.||++||||++++|+|+||+++++++++.+.......+++||++||++|++++++|+.++++++.+
T Consensus 241 ~r~g~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~ 320 (423)
T TIGR00713 241 FRVALGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYT 320 (423)
T ss_pred cccCcchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHH
Confidence 98777777888999999999999999999999999999999998743345677899999999999999999998878999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE
Q 011959 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~ 451 (474)
+++++++++++.|+++..+++++.++++.|+|+++++..+...++.....++......+.+.|+++||++.+.+++.+++
T Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~l 400 (423)
T TIGR00713 321 ELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFL 400 (423)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCccceee
Confidence 99999999999999988888988899999999999987543322221122334445678889999999998776566788
Q ss_pred ecCCcHHHHHHHHHHHHHHHhhC
Q 011959 452 SLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 452 ~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
+..+|+++|++++++|+++++++
T Consensus 401 ~~~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 401 SAAHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred ECCCCHHHHHHHHHHHHHHHhhC
Confidence 88899999999999999999865
No 9
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-70 Score=504.10 Aligned_cols=410 Identities=27% Similarity=0.349 Sum_probs=354.8
Q ss_pred ccCCCchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHH
Q 011959 45 RKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAAL 124 (474)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~ 124 (474)
|.+++.+...+..+..++.+..+..++.+ .|++|.+++|+|++|.+|++|||+.+|.++..+||+||+|++++
T Consensus 3 p~~~~~~~~~~~~~~~~~~ls~~~~~~~~-------~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~ 75 (442)
T KOG1404|consen 3 PPPYTGPSTDQVLQKRRAFLSPGLTSYYK-------KPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAA 75 (442)
T ss_pred CCccCCcchhhHHHHhhhcCCcceecccc-------CCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHH
Confidence 33566666666666667777666554422 49999999999999999999999999999999999999999999
Q ss_pred HHHHHhc--CCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHh
Q 011959 125 GETMKKG--TSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK 201 (474)
Q Consensus 125 ~~~~~~~--~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~ 201 (474)
.+|+.+. +..++.++...+||+.|.+.+| +...++|+|||+|||++|+++||.|++.-+||.+.++|||.+..++.+
T Consensus 76 ~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~gl 155 (442)
T KOG1404|consen 76 VKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGL 155 (442)
T ss_pred HHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhccc
Confidence 9999774 3345678888999999999999 588999999999999999999999999999999999999999999999
Q ss_pred cCCCCccCCCCCC-CCCCCCCCCceEEccCCC----------HHHHHHHHhc-CCCCeEEEEEccccCCCCcccCCHHHH
Q 011959 202 AGSGVATLGLPDS-PGVPKGATYETLTAPFND----------VSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFL 269 (474)
Q Consensus 202 ~g~~~~~~~~~~~-~g~~~~~~~~~~~~~~~d----------~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l 269 (474)
++...++..+|.. .++.+...++.++.++.+ .+++++++.. .++.++++|+|++++.+|++.++++||
T Consensus 156 t~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYl 235 (442)
T KOG1404|consen 156 TGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYL 235 (442)
T ss_pred ccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHH
Confidence 9988777666554 366566666677777653 2556666543 456799999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCC
Q 011959 270 NAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 348 (474)
Q Consensus 270 ~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~ 348 (474)
+++.++|+|+|.++|.||||+|| |+|.+|.++..|+.|||+|++|++|+|+|+|+++.++||++.+.+ ...++.||+
T Consensus 236 ka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~--~~~~fnTyg 313 (442)
T KOG1404|consen 236 KAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQ--KSSHFNTYG 313 (442)
T ss_pred HHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHh--ccccccccC
Confidence 99999999999999999999999 999999999999999999999999999999999999999999985 334888999
Q ss_pred CChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHH
Q 011959 349 GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 428 (474)
Q Consensus 349 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 428 (474)
+||++|++++++|++++++++.++..+.+.+|+++|.++..+++++.+|||.|+|+++|+.++... .+.|......
T Consensus 314 gnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~----~~pp~~~~~~ 389 (442)
T KOG1404|consen 314 GNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSE----PKPPATAEGA 389 (442)
T ss_pred CCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCC----CCCcchHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999876432 2335556667
Q ss_pred HHHHHHHHCCeEecccCCc--ceEE--ecCCcHHHHHHHHHHH
Q 011959 429 RFYRGMLEEGVYFAPSQFE--AGFT--SLAHSSDDIQHTITAA 467 (474)
Q Consensus 429 ~~~~~l~~~Gv~v~~~~~~--~~~~--~~~~t~e~i~~~l~~l 467 (474)
.+.+.|.++|+++.-++.. .+|+ ++++|+||+|.+++.+
T Consensus 390 ~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 390 VIGEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 7899999999999666532 3455 7999999998888855
No 10
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=4.3e-69 Score=544.99 Aligned_cols=416 Identities=22% Similarity=0.315 Sum_probs=340.9
Q ss_pred CchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHH
Q 011959 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM 128 (474)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~ 128 (474)
++.+|.+++++.++++.... +.+.. ..|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~----~~~~~--~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~ 76 (451)
T PRK07678 3 KTKQTDELLAKDEQYVWHGM----KPYNP--NATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQL 76 (451)
T ss_pred cccCHHHHHHHhhcccCCCc----ccccc--CCCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHH
Confidence 45567788887666544322 11211 1379999999999999999999999999999999999999999999999
Q ss_pred HhcCCC--CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhc------CCcEEEEEeCCCCCCchhHHH
Q 011959 129 KKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLV 200 (474)
Q Consensus 129 ~~~~~~--~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~ 200 (474)
+++..+ .+.++...+|+++|++.+|..++++|+|||+||++.|+|+||.++ +|.+||.++++|||++.++++
T Consensus 77 ~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als 156 (451)
T PRK07678 77 KTLSYFPLTQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALA 156 (451)
T ss_pred HhcCccccccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhh
Confidence 986433 356788899999999999866799999999999999999999986 578999999999999999998
Q ss_pred hcCCCCccCCC-CCCCCCCCCCCCceEEccC------CC---HHHHHHHHh-cCCCCeEEEEEccccCCCCcccCCHHHH
Q 011959 201 KAGSGVATLGL-PDSPGVPKGATYETLTAPF------ND---VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFL 269 (474)
Q Consensus 201 ~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~------~d---~~~le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l 269 (474)
.++.......+ |..+++......+.+..++ +| ++.++++|+ ++++++++||+||+++++|.+.|+++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl 236 (451)
T PRK07678 157 ATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYM 236 (451)
T ss_pred cCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHH
Confidence 88764322211 2233332222223333333 22 334677776 4467899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCC---CCcccc
Q 011959 270 NAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQA 344 (474)
Q Consensus 270 ~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~---~~~~~~ 344 (474)
++|+++|++||++||+|||+||| |+|.+|+++++|+.||++|+||+++|| +|+|++++++++++.+... ..+.|+
T Consensus 237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~ 316 (451)
T PRK07678 237 KAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHV 316 (451)
T ss_pred HHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccC
Confidence 99999999999999999999999 999998999999999999999999998 6999999999999988642 124688
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccch
Q 011959 345 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSET 424 (474)
Q Consensus 345 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~ 424 (474)
+||++||++|++++++|++++++++++++++++++|+++|+++..+++.+.++++.|+|+++++..+... ....+.
T Consensus 317 ~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~----~~~~~~ 392 (451)
T PRK07678 317 NTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKET----KEPADN 392 (451)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcc----cCcCch
Confidence 9999999999999999999998999999999999999999988888999999999999999999753211 011133
Q ss_pred HHHHHHHHHHHHCCeEecccCC------cceEE--ecCCcHHHHHHHHHHHHHHHhhC
Q 011959 425 TKFARFYRGMLEEGVYFAPSQF------EAGFT--SLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 425 ~~~~~~~~~l~~~Gv~v~~~~~------~~~~~--~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
.....+...|+++||++.+.+. +.+++ ++++|++|||+++++|+++++++
T Consensus 393 ~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 393 DKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred HHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 4567889999999999976431 33454 68899999999999999999764
No 11
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-69 Score=544.95 Aligned_cols=421 Identities=19% Similarity=0.202 Sum_probs=337.9
Q ss_pred chhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHH
Q 011959 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 129 (474)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~ 129 (474)
+.+++++.++.+++++.+.... ..+......|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~ 80 (461)
T PRK07482 2 MQKIDELLAWDRDHFFHPSTHL-GDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAK 80 (461)
T ss_pred cccHHHHHHhhhhhccCCcccc-cccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHH
Confidence 4567788887776665443322 111111123899999999999999999999999999999999999999999999999
Q ss_pred hcCC----CCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhH
Q 011959 130 KGTS----FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPF 198 (474)
Q Consensus 130 ~~~~----~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~ 198 (474)
++.. .++.++...+|+++|++..| +.++++|+||||||++.|+|+||.+ ++|.+||.++++|||++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga 160 (461)
T PRK07482 81 ELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVT 160 (461)
T ss_pred hcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhh
Confidence 8642 24678999999999999998 5789999999999999999999976 45889999999999999998
Q ss_pred HHhcCCCCccCCC-CCCCCCCCCCCCceEEcc----------CCCHHHHHHHHh-cCCCCeEEEEEccccCCCCcccCCH
Q 011959 199 LVKAGSGVATLGL-PDSPGVPKGATYETLTAP----------FNDVSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKP 266 (474)
Q Consensus 199 ~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~----------~~d~~~le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (474)
++.++.......+ |...++........+..+ .++++++++++. ..++++++||+||+++++|.++|++
T Consensus 161 ~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~ 240 (461)
T PRK07482 161 GSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPA 240 (461)
T ss_pred hhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCH
Confidence 8887754322111 111221110001111111 014678888885 3456899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC----CC
Q 011959 267 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA----GP 340 (474)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~----~~ 340 (474)
+|+++|+++|++||++||+|||+||| |+|.+|+++++|+.||++|++|+++||+ |+|++++++++++.+... +.
T Consensus 241 ~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~ 320 (461)
T PRK07482 241 GYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGA 320 (461)
T ss_pred HHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCc
Confidence 99999999999999999999999999 9999999999999999999999999996 999999999999887531 23
Q ss_pred cccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCccccc
Q 011959 341 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 420 (474)
Q Consensus 341 ~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~ 420 (474)
..|++||++||++|++++++|+.++++++.+++++++++|+++|+++..+++.+.++++.|+|++++|.++.... ...
T Consensus 321 ~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~--~~~ 398 (461)
T PRK07482 321 IGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDR--TPF 398 (461)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcC--CCC
Confidence 468899999999999999999999999999999999999999999998899999999999999999997532110 000
Q ss_pred ccchHHHHHHHHHHHHCCeEeccc-CCcceE--EecCCcHHHHHHHHHHHHHHHhh
Q 011959 421 KSETTKFARFYRGMLEEGVYFAPS-QFEAGF--TSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 421 ~~~~~~~~~~~~~l~~~Gv~v~~~-~~~~~~--~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.+.......+...|+++||++.+. ..+.++ +++++|++||++++++|++++++
T Consensus 399 ~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 399 DPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred ChhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 011123467889999999998653 123444 37999999999999999999865
No 12
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=5.9e-70 Score=528.43 Aligned_cols=388 Identities=28% Similarity=0.336 Sum_probs=328.1
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCC-C-CC
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-S-IE 156 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~la~~l~~~~~-~-~~ 156 (474)
|.++++++|.|+||.|||+|||.+++||++++||+||+|.+|+++|+++... ++..+....+||++|++..| + .+
T Consensus 27 ~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~ 106 (449)
T COG0161 27 PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLD 106 (449)
T ss_pred ceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCcc
Confidence 7899999999999999999999999999999999999999999999998532 34456669999999999999 6 89
Q ss_pred eEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCC-CccCCC-CCCCCCCCCCCCceEEc
Q 011959 157 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSG-VATLGL-PDSPGVPKGATYETLTA 228 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~~-~~~~g~~~~~~~~~~~~ 228 (474)
+|+|++|||||+|.|||+|+.| ++|.++|....+|||.+.++++.+|.. .....+ +..++..+......+..
T Consensus 107 ~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~ 186 (449)
T COG0161 107 HVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRR 186 (449)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCccccc
Confidence 9999999999999999999887 346779999999999999999998832 221111 11222111111111111
Q ss_pred cC---------CCHHHHHHHHhcCC-CCeEEEEEccccCC-CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC
Q 011959 229 PF---------NDVSALENLFENNK-GEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 296 (474)
Q Consensus 229 ~~---------~d~~~le~~l~~~~-~~~a~vi~ep~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~ 296 (474)
+. ..+++||++|.+++ +++++||+||+.+. +|+++|+++||+++++||++||++||+|||.||| |+|.
T Consensus 187 ~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~ 266 (449)
T COG0161 187 GFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK 266 (449)
T ss_pred CCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch
Confidence 11 23677888888765 89999999998887 9999999999999999999999999999999999 9999
Q ss_pred CccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcC--CCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHH
Q 011959 297 GGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP--AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 373 (474)
Q Consensus 297 ~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~--~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~ 373 (474)
+|+++++|++||++|++|++++| +|+|+++.++++.+.+.. .+.++|+.||++||++|++|++.|++++++++.+++
T Consensus 267 ~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~ 346 (449)
T COG0161 267 MFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERV 346 (449)
T ss_pred hhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99999999999999999999999 599999999999999875 356789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCc-ceEEe
Q 011959 374 NKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFTS 452 (474)
Q Consensus 374 ~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~~~ 452 (474)
++.+.+|.++|++++.+++.+.+||+.|++.++++..+....... +.....++...++++|++++|.+.. .+.++
T Consensus 347 ~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f----~~~~~~~~~~~~~e~Gl~iRp~g~~i~~~PP 422 (449)
T COG0161 347 AEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPF----EARVGARVRAAALERGLLIRPLGDVIYLMPP 422 (449)
T ss_pred HHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccch----hhhHHHHHHHHHHHCCeEEeecCCEEEEcCC
Confidence 999999999999977778999999999999999998653211000 2344568889999999999999642 22347
Q ss_pred cCCcHHHHHHHHHHHHHHHhh
Q 011959 453 LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 453 ~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+++|++|||++++++.+++++
T Consensus 423 liit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 423 LIITREEIDELVDALREALDE 443 (449)
T ss_pred ccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999875
No 13
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.5e-68 Score=539.76 Aligned_cols=425 Identities=65% Similarity=1.083 Sum_probs=369.9
Q ss_pred chhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHH
Q 011959 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 129 (474)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~ 129 (474)
+++|++++|++++++|+|.+++++.+++++..|+++.+++|+|+||.||++||||.+++++.++||+||+|++++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~ 80 (426)
T PRK00062 1 MSKSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAE 80 (426)
T ss_pred CchhHHHHHHHHHhCCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHH
Confidence 35799999999999999999888888777667899999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccC
Q 011959 130 KGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL 209 (474)
Q Consensus 130 ~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~ 209 (474)
++..++.+++...+|+++|++.+|+.++++|++||+||++.|++++|.++++++||.++++|||++.+++..++......
T Consensus 81 ~~~~~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 160 (426)
T PRK00062 81 KGLSFGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATL 160 (426)
T ss_pred hCCcCCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCcccccc
Confidence 86655667888999999999998777899999999999999999999999999999999999999988887765432221
Q ss_pred CCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 210 GLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 210 ~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
..+...+.+.......+.++|+|++++++.++++++++++||+||+++++|.+.++++||++|+++|++||+++|+||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 240 (426)
T PRK00062 161 GLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVM 240 (426)
T ss_pred CCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeech
Confidence 22222232222223568889999999999997666789999999999999999999999999999999999999999999
Q ss_pred cCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCH
Q 011959 290 TGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (474)
Q Consensus 290 ~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (474)
+|||+|.++..+++++.||++++||++++|||+|++++++++++.+...+..++++|+++||++|++++++|+.++++++
T Consensus 241 ~G~r~g~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~ 320 (426)
T PRK00062 241 TGFRVALGGAQGYYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGF 320 (426)
T ss_pred hccccCCccHHHHhCCCcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchH
Confidence 99987878888889999999999999999999999999999999986444556778999999999999999999988889
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcce
Q 011959 370 YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG 449 (474)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 449 (474)
++++++++++++++|+++..+++++.++++.|+|+++++..++..++.....++......+.+.|+++||++.+.+++.+
T Consensus 321 ~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~~ 400 (426)
T PRK00062 321 YEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQFEAG 400 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCcCce
Confidence 99999999999999999888889888999999999999976443333333334555567899999999999998877778
Q ss_pred EEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 450 FTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 450 ~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
++++++|+++|++++++|+++++++
T Consensus 401 ~~~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 401 FVSAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred eeeccCCHHHHHHHHHHHHHHHHhh
Confidence 8899999999999999999998763
No 14
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-68 Score=538.55 Aligned_cols=392 Identities=25% Similarity=0.356 Sum_probs=328.5
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCC-CCe
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPS-IEM 157 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~-~~~ 157 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|++++.. ..+.++...+|+++|++..|+ .++
T Consensus 35 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 114 (451)
T PRK06062 35 NPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSK 114 (451)
T ss_pred CCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCE
Confidence 48999999999999999999999999999999999999999999999998643 345788899999999999984 789
Q ss_pred EEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC---CC--
Q 011959 158 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---ND-- 232 (474)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~---~d-- 232 (474)
|+|++||+||++.|+|+||.+++|.+||.++++|||++.++++.++........|..++++.......+..++ +|
T Consensus 115 v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 194 (451)
T PRK06062 115 VFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEE 194 (451)
T ss_pred EEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHH
Confidence 9999999999999999999999999999999999999999999887543221112222332221222333334 33
Q ss_pred -----HHHHHHHHhcC-CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCC
Q 011959 233 -----VSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV 305 (474)
Q Consensus 233 -----~~~le~~l~~~-~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~ 305 (474)
+++++++|+.+ ++++++||+||+++++|.+.|+++||++|+++|++||++||+|||++|| |+|.+|+++++|+
T Consensus 195 ~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv 274 (451)
T PRK06062 195 ECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV 274 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC
Confidence 67888888653 4689999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CCceeehhhhcCCCc-ceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHH-HHHHHH
Q 011959 306 TPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT-GELTQG 383 (474)
Q Consensus 306 ~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~-~~l~~~ 383 (474)
.||++||||++++|+ |+|++++++++++.+.. ..+.+++||++||++|++++++|++++++++++++++++ ++++++
T Consensus 275 ~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~-~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~ 353 (451)
T PRK06062 275 VPDLITFAKGVNSGYVPLGGVAISEAIAATFAD-RPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPG 353 (451)
T ss_pred CCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc-CCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 999999999999995 99999999999998863 234577899999999999999999998888999999999 699999
Q ss_pred HHHHhhhcCCeeEEeeeceeEEEEEecCCC-cCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHH
Q 011959 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPV-YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDI 460 (474)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i 460 (474)
|+++..+++.+.++++.|+|+++++..++. .+..+....+......+.+.|+++||++.+.+ +.+++ ++.+|++||
T Consensus 354 L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~-~~lrl~ppl~~t~~ei 432 (451)
T PRK06062 354 LRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNG-NRIHVVPPCTVTEDEV 432 (451)
T ss_pred HHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeecC-CEEEEECCccCCHHHH
Confidence 999988889889999999999999964321 11000000112345678899999999987643 34554 679999999
Q ss_pred HHHHHHHHHHHhhC
Q 011959 461 QHTITAAEKVLRQI 474 (474)
Q Consensus 461 ~~~l~~l~~~~~~~ 474 (474)
|+++++|+++++++
T Consensus 433 d~~~~~l~~~l~~~ 446 (451)
T PRK06062 433 REGLAILDAALAVA 446 (451)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 15
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-68 Score=538.25 Aligned_cols=390 Identities=22% Similarity=0.264 Sum_probs=322.9
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHhhCC-CC
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SI 155 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~----~~~~~~~~~~la~~l~~~~~-~~ 155 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|+++... +++.++...+|+++|++.+| +.
T Consensus 28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 107 (459)
T PRK05965 28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL 107 (459)
T ss_pred CCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc
Confidence 37899999999999999999999999999999999999999999999998542 24568888999999999998 67
Q ss_pred CeEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEc
Q 011959 156 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 228 (474)
Q Consensus 156 ~~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~ 228 (474)
++++|++||+||++.|||+||.+ ++|.+||.++++|||++.+++..++.......+ +..++.........+..
T Consensus 108 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (459)
T PRK05965 108 NHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRN 187 (459)
T ss_pred CEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCccccc
Confidence 89999999999999999999988 458899999999999999888887753322111 11111100000001111
Q ss_pred cC-CC--------HHHHHHHHhcCC-CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC
Q 011959 229 PF-ND--------VSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (474)
Q Consensus 229 ~~-~d--------~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (474)
++ +| +++++++++++. +++++||+||+++++|.+.|+++||++|+++|++||++||+|||+||| |+|.+
T Consensus 188 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~ 267 (459)
T PRK05965 188 PVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPL 267 (459)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchh
Confidence 11 23 367888887543 689999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC----CCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 298 GAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 298 ~~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
|+++++|+.|||+|+||+++||+ |+|++++++++++.+... ..+.+++||++||++|++++++|++++++++.++
T Consensus 268 ~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~ 347 (459)
T PRK05965 268 FACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLAN 347 (459)
T ss_pred hhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999999995 999999999999988632 1246889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceE--
Q 011959 373 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF-- 450 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~-- 450 (474)
+++++++|+++|+++. +++.+.++++.|+|++++|..+.... ....++......+.+.|+++||++.+.+...++
T Consensus 348 ~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~--~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~ 424 (459)
T PRK05965 348 GQKAGPRFAAGLDALR-AHPLVGDVRGRGLLGALELVADKATK--TPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFA 424 (459)
T ss_pred HHHHHHHHHHHHHhhc-cCCCEEEEeecceEEEEEEecccccc--CCCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEE
Confidence 9999999999999975 58889999999999999997532110 000112234567889999999999887644444
Q ss_pred EecCCcHHHHHHHHHHHHHHHhh
Q 011959 451 TSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 451 ~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+++++|++||++++++|++++++
T Consensus 425 PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 425 PALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999875
No 16
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-68 Score=537.73 Aligned_cols=402 Identities=25% Similarity=0.372 Sum_probs=334.5
Q ss_pred CchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHH
Q 011959 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM 128 (474)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~ 128 (474)
..+++.+++++.+++++.+..++ .|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+
T Consensus 15 ~~~~s~~~~~~~~~~~~~~~~~~---------~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~ 85 (443)
T PRK06058 15 PGPKSQALAERRAAAVAAGVGST---------LPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQV 85 (443)
T ss_pred CCccHHHHHHHHHHhhccccccC---------CCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHH
Confidence 33467778888778887765432 389999999999999999999999999999999999999999999999
Q ss_pred HhcCCC---CCCCHHHHHHHHHHHhhCCC--CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcC
Q 011959 129 KKGTSF---GAPCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG 203 (474)
Q Consensus 129 ~~~~~~---~~~~~~~~~la~~l~~~~~~--~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g 203 (474)
+++..+ ..+++...+|+++|++.+|+ .++++|++||+||++.|+|+||.++++++||.++++|||++.++++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~ 165 (443)
T PRK06058 86 ARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTA 165 (443)
T ss_pred HhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcC
Confidence 885422 24678889999999999984 3799999999999999999999999999999999999999999998876
Q ss_pred CCC-ccCCC-CCCCCCCCCCCCceEEccCCC---------------HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCH
Q 011959 204 SGV-ATLGL-PDSPGVPKGATYETLTAPFND---------------VSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (474)
Q Consensus 204 ~~~-~~~~~-~~~~g~~~~~~~~~~~~~~~d---------------~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (474)
... ....+ |..+++.. ..+.+++++ ++.+++.+ .++++++||+||+++++|.+.|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iAavi~EPi~g~gG~~~p~~ 239 (443)
T PRK06058 166 KSMPYKSGFGPFAPEVYR----APMSYPYRDPKGLATDGEEAAARAITVIEKQV--GADNLAAVIIEPIQGEGGFIVPAE 239 (443)
T ss_pred CCcccccccCCCCCCceE----cCCCcccccccccccchHHHHHHHHHHHHHhh--CCCceEEEEECCccCCCCCcCCCH
Confidence 421 11111 11111100 011122322 12222322 246899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCccccc
Q 011959 267 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG 345 (474)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~ 345 (474)
+||++|+++|++||++||+||||+|| |+|.+|+++++|+.||++|+||++++|+|+|++++++++++.+. ...+.+
T Consensus 240 ~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~---~~~~~~ 316 (443)
T PRK06058 240 GFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPH---PGGLGG 316 (443)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhcc---CCCCCC
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999886 345788
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchH
Q 011959 346 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 425 (474)
Q Consensus 346 t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 425 (474)
||++||++|++++++|+.++++++.+++++++++|+++|+++..+++++.++++.|+|+++++.++.. ..++..
T Consensus 317 T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~------~~~~~~ 390 (443)
T PRK06058 317 TYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGT------TEPDAE 390 (443)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCC------CCCcHH
Confidence 99999999999999999998899999999999999999999888889999999999999999975421 123445
Q ss_pred HHHHHHHHHHHCCeEecccCC--cceEE--ecCCcHHHHHHHHHHHHHHHhhC
Q 011959 426 KFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 426 ~~~~~~~~l~~~Gv~v~~~~~--~~~~~--~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
....+.+.|+++||++.+.+. +.+++ ++++|+++|++++++|+++++++
T Consensus 391 ~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 391 LTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 567788999999999987542 34555 79999999999999999999875
No 17
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-68 Score=498.92 Aligned_cols=410 Identities=45% Similarity=0.687 Sum_probs=353.7
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-
Q 011959 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG- 131 (474)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~- 131 (474)
+.+....+...++++.....|....+.++|+++++++|+++||.||++||||+++||+..+||+||+|.+++.+|+.+.
T Consensus 10 ~~~~~~~~~~~~~~i~~~~~~~~~t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~ 89 (433)
T KOG1401|consen 10 SEDASNAASVSMPGIVEEKTRIVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLG 89 (433)
T ss_pred CcccccchhhccccccccceEEeeecCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhhe
Confidence 4445555666778888777788888888899999999999999999999999999999999999999999999999985
Q ss_pred C-CCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHhHhhcCCcE------EEEEeCCCCCCchhHHHhc
Q 011959 132 T-SFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRER------IIKFEGCYHGHADPFLVKA 202 (474)
Q Consensus 132 ~-~~~~~~~~~~~la~~l~~~~~--~~~~v~~~~sGseA~~~al~~ar~~~~~~~------ii~~~~~yhg~~~~~~~~~ 202 (474)
. ..++......++++.+.+... +.++|+|+|||||||+.|||+||.++..+. +|.|+++|||.+.++++.+
T Consensus 90 hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~ 169 (433)
T KOG1401|consen 90 HSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVT 169 (433)
T ss_pred eccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhh
Confidence 2 233444447889999888774 689999999999999999999999976544 9999999999999999988
Q ss_pred CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCE
Q 011959 203 GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGAL 282 (474)
Q Consensus 203 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~l 282 (474)
+...+. .|+.+- ..++..+++||..+++++++.+.+++++||+||++|+||.+++.++|++.|+++|+++|++
T Consensus 170 ~~s~y~--~~~~p~-----~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl 242 (433)
T KOG1401|consen 170 GNSKYG--LPFDPI-----APDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVL 242 (433)
T ss_pred cccccC--CCCCCC-----CCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCce
Confidence 665443 233332 3358889999999999999999889999999999999999999999999999999999999
Q ss_pred EEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHH
Q 011959 283 LIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 361 (474)
Q Consensus 283 lI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal 361 (474)
||+|||+||| |.|..|++++++++|||+|++|.|+||+|+|++++++++++.+.+...++|++||++||++|.++..+|
T Consensus 243 ~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l 322 (433)
T KOG1401|consen 243 LIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVL 322 (433)
T ss_pred EEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHH
Confidence 9999999999 999999999999999999999999999999999999999999998777889999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEE-eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeE
Q 011959 362 KRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 440 (474)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 440 (474)
+.+.+++.++++.+.++.|++.|.+...+.+..... .+.|+++++++..+ +..+.+...........+...+++.|++
T Consensus 323 ~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p-~~~~~d~~~~~~ll~~~~~~~~~~~gv~ 401 (433)
T KOG1401|consen 323 DELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGP-VYKFADAAREQGLLILTLGKGLLEEGVR 401 (433)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeec-hhhhhhhhhhhhHHHHHHhcccccceEE
Confidence 999999999999999999999999998888766665 89999999998653 3333333333444555566677788999
Q ss_pred ecccCCcceEEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 441 FAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 441 v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
+.|. ..++..+|+|.++++++++.+++.++
T Consensus 402 i~P~----~~l~~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 402 IAPI----YLLTVEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred Eecc----ccccccCcHHHHHHHHHHHHHHHHHh
Confidence 9882 23456778999999999999998764
No 18
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-68 Score=536.14 Aligned_cols=383 Identities=25% Similarity=0.368 Sum_probs=320.0
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCCC-C-
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPS-I- 155 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~la~~l~~~~~~-~- 155 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|+++... .++.++...+|+++|.+..|. .
T Consensus 45 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~ 124 (464)
T PRK06938 45 IPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFA 124 (464)
T ss_pred CCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCccccc
Confidence 48999999999999999999999999999999999999999999999986321 245788899999999999873 2
Q ss_pred --CeEEEe-CCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEccCC
Q 011959 156 --EMVRFV-NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN 231 (474)
Q Consensus 156 --~~v~~~-~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ 231 (474)
++++|+ |||+||++.|+|+||.+++|.+||.++++|||++.++++.++.......+ +..+++ ..+.+|++
T Consensus 125 ~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~------~~~~~p~~ 198 (464)
T PRK06938 125 REAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGV------QFLPYPYD 198 (464)
T ss_pred ccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCc------EEeCCCcc
Confidence 477776 89999999999999999999999999999999999999887753222111 111111 12222322
Q ss_pred ---------------CHHHHHHHHhcC---CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-
Q 011959 232 ---------------DVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 292 (474)
Q Consensus 232 ---------------d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~- 292 (474)
+++.+++++++. ++++++||+||+++++|.++|+++||++|+++|++||++||+|||+|||
T Consensus 199 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfG 278 (464)
T PRK06938 199 YRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFG 278 (464)
T ss_pred ccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 267788888743 2479999999999999999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 293 RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 293 r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
|+|.+|+++++|+.||++|+||+++||+|+|++++++++ +.+. ...+++||++||++|++++++|++++++++.++
T Consensus 279 RtG~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~---~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~ 354 (464)
T PRK06938 279 RTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQ---PGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEH 354 (464)
T ss_pred cCcHHHHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccC---CCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999999999999885 6554 346889999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCC-CcCcccccccchHHHHHHHHHHHHCCeEecccC--Ccce
Q 011959 373 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAG 449 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~ 449 (474)
+++++++|+++|+++..+++++.+++|.|+|++++|.++. ..++......+......+.+.|+++|+++.+.+ .+.+
T Consensus 355 ~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l 434 (464)
T PRK06938 355 AAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVV 434 (464)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEE
Confidence 9999999999999998889999999999999999996532 111111111123445678899999999998754 2344
Q ss_pred E--EecCCcHHHHHHHHHHHHHHHhh
Q 011959 450 F--TSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 450 ~--~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+ +++++|++|+++++++|++++++
T Consensus 435 ~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 435 RFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHH
Confidence 4 37999999999999999999875
No 19
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-68 Score=534.75 Aligned_cols=373 Identities=27% Similarity=0.386 Sum_probs=327.5
Q ss_pred CCCeEEEeecc-CEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhhCC-CC
Q 011959 80 GQPIVFDSVKG-SHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVP-SI 155 (474)
Q Consensus 80 ~~p~~~~~~~G-~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~-~~ 155 (474)
.+|+++.+++| +|+||.|||+||||.+|+|+.++||+||+|++|+++|++++..+ +.+++...+|+++|++..| +.
T Consensus 62 ~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~ 141 (459)
T PRK11522 62 DYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKL 141 (459)
T ss_pred CCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCC
Confidence 35889999999 99999999999999999999999999999999999999986433 3568889999999999998 47
Q ss_pred CeEEEeCCHHHHHHHHHHHhHhhcC---CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCC
Q 011959 156 EMVRFVNSGTEACMGVLRLARAFTG---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (474)
Q Consensus 156 ~~v~~~~sGseA~~~al~~ar~~~~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 232 (474)
++++|+|||+||++.|+|+||.+++ |.+||.++++|||++.++++.++...... +..+.. ..+..+|+||
T Consensus 142 ~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~--~~~~~~-----~~~~~~~~~d 214 (459)
T PRK11522 142 KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRK--PFMPLL-----PGFRHVPFGN 214 (459)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCccccc--CCCCCC-----CCCcccCCCC
Confidence 8999999999999999999999985 67899999999999999999887643321 111121 2356789999
Q ss_pred HHHHHHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCc
Q 011959 233 VSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308 (474)
Q Consensus 233 ~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pd 308 (474)
.+++++.++. +++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+|+++++|+.||
T Consensus 215 ~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD 294 (459)
T PRK11522 215 IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPD 294 (459)
T ss_pred HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCC
Confidence 9999998863 34679999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred eeehhhhcCCC-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 011959 309 LTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 387 (474)
Q Consensus 309 i~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (474)
++||||++++| +|+|++++++++++.+.. .+..+++||++||++|++++++|+.++++++.+++++++++|+++|+++
T Consensus 295 ivt~gK~lggG~~Pigav~~~~~i~~~~~~-~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 373 (459)
T PRK11522 295 ILCLAKALGGGVMPIGATIATEEVFSVLFD-NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQL 373 (459)
T ss_pred EEEechhhhCCCccceeEEEcHHHHHHhcc-CCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 699999999999988752 2456889999999999999999999998899999999999999999999
Q ss_pred hhhcC-CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--CcceE--EecCCcHHHHHH
Q 011959 388 GKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGF--TSLAHSSDDIQH 462 (474)
Q Consensus 388 ~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~--~~~~~t~e~i~~ 462 (474)
..+++ ++.++++.|+|+++++.++ +....+.+.|+++||++.+.. ...++ +++++|++|||+
T Consensus 374 ~~~~~~~i~~VrG~Gl~~giel~~~-------------~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~ 440 (459)
T PRK11522 374 AREYPDLVQEARGKGMLMAIEFVDN-------------EIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQ 440 (459)
T ss_pred HHhCCCceeeEEeceeEEEEEecCc-------------hHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHH
Confidence 88887 7889999999999999642 224578899999999997653 23444 479999999999
Q ss_pred HHHHHHHHHhh
Q 011959 463 TITAAEKVLRQ 473 (474)
Q Consensus 463 ~l~~l~~~~~~ 473 (474)
++++|++++++
T Consensus 441 ~l~~l~~~l~~ 451 (459)
T PRK11522 441 VLKAARKALAA 451 (459)
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 20
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-67 Score=533.34 Aligned_cols=390 Identities=25% Similarity=0.302 Sum_probs=328.8
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHhhCC--C
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP--S 154 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~----~~~~~~~~~~la~~l~~~~~--~ 154 (474)
.|+++++++|+|+||.|||+||||.++++++++||+||+|.+|+++|++++.. .+..++...+|+++|++.+| +
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 103 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG 103 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC
Confidence 48999999999999999999999999999999999999999999999998542 24578899999999999984 4
Q ss_pred CCeEEEeCCHHHHHHHHHHHhHhhc------CCcEEEEEeCCCCCCchhHHHhcCCCCccCC-CCCCCCCCCCCCCceEE
Q 011959 155 IEMVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDSPGVPKGATYETLT 227 (474)
Q Consensus 155 ~~~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~ 227 (474)
.++++|++||+||++.|+|+||.++ +|.+||.++++|||++.+++..++....... .|..+++........+.
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYR 183 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccc
Confidence 6899999999999999999999985 6889999999999999999987765432211 13334444333334455
Q ss_pred ccCC--CHHHH--------HHHHh-cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccC
Q 011959 228 APFN--DVSAL--------ENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA 295 (474)
Q Consensus 228 ~~~~--d~~~l--------e~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g 295 (474)
+||| |.+.+ |++|. ++++++++||+||+++++|.+.|+++||++|+++|++||++||+|||+||| |+|
T Consensus 184 ~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG 263 (449)
T PRK07481 184 NPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG 263 (449)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc
Confidence 5676 55443 44444 345789999999999999999999999999999999999999999999999 999
Q ss_pred CCccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCC----CCcccccCCCCChHHHHHHHHHHHHhcCCCHH
Q 011959 296 YGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (474)
.+|+++++|+.||++|+||+++|| +|+|++++++++++.+... +...|++||++||++|++++++|+++++++++
T Consensus 264 ~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~ 343 (449)
T PRK07481 264 SWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLP 343 (449)
T ss_pred hhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 999999999999999999999999 5999999999999988632 23468899999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCC-cCcccccccchHHHHHHHHHHHHCCeEecccCCcce
Q 011959 371 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV-YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG 449 (474)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 449 (474)
+++++++++|++.|+++..+++++.++++.|+|++++|..+.. .+. ..+.......+.+.|+++||++.+.+. .+
T Consensus 344 ~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~Gvl~~~~g~-~i 419 (449)
T PRK07481 344 ANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREP---IDPSKGYANAVADVARENGVLVRPSGT-KI 419 (449)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCC---CCchhHHHHHHHHHHHhCCeEEEecCC-EE
Confidence 9999999999999999988889999999999999999964321 110 001123456788899999999988753 34
Q ss_pred EE--ecCCcHHHHHHHHHHHHHHHhhC
Q 011959 450 FT--SLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 450 ~~--~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
++ ++++|++|||+++++|+++++++
T Consensus 420 ~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 420 ILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 44 58899999999999999998764
No 21
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-67 Score=534.16 Aligned_cols=389 Identities=26% Similarity=0.395 Sum_probs=321.0
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCCCCC-
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPSIE- 156 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~la~~l~~~~~~~~- 156 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++.. ..++++...+|+++|.+.+|+.+
T Consensus 40 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~ 119 (459)
T PRK06931 40 LPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGK 119 (459)
T ss_pred CCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccc
Confidence 48999999999999999999999999999999999999999999999987432 22578889999999999997432
Q ss_pred ---eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEccCC-
Q 011959 157 ---MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN- 231 (474)
Q Consensus 157 ---~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~- 231 (474)
.++|+|||+||++.|||+||.+++|.+||.++++|||++.++++.++.......+ |..+++......+.+.+|++
T Consensus 120 ~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (459)
T PRK06931 120 EYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGI 199 (459)
T ss_pred cceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccC
Confidence 3466699999999999999999999999999999999999999887754322111 22333332223334444554
Q ss_pred ----CHHHH----HHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc
Q 011959 232 ----DVSAL----ENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299 (474)
Q Consensus 232 ----d~~~l----e~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~ 299 (474)
+.+.+ ++.+.+ .++++++||+||+++++|.+.|+++||++|+++|++||++||+|||+||| |+|.+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a 279 (459)
T PRK06931 200 GGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFA 279 (459)
T ss_pred CchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHH
Confidence 23333 344432 34579999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 011959 300 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 379 (474)
Q Consensus 300 ~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 379 (474)
++++|+.||++|+||+++||+|+|++++++++ +.+. ...+++||++||++|++++++|++++++++++++++++++
T Consensus 280 ~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~-~~~~---~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~ 355 (459)
T PRK06931 280 FEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEF-DAWQ---PGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEW 355 (459)
T ss_pred hhhcCCCCCEEEecccccCCcceeeeeeHHHH-hhcc---CCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999999999888774 6664 3458899999999999999999999989999999999999
Q ss_pred HHHHHHHHhhhcCCeeEEeeeceeEEEEEecCC-CcCcccccccchHHHHHHHHHHHHCCeEecccCC--cceE--EecC
Q 011959 380 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLA 454 (474)
Q Consensus 380 l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~--~~~~ 454 (474)
|+++|+++..+++++.+++|.|+|+++++.++. ..++......+......+.+.|+++||++.+.+. +.++ ++++
T Consensus 356 l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~ 435 (459)
T PRK06931 356 LKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLL 435 (459)
T ss_pred HHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCC
Confidence 999999998889999999999999999997532 1111111112334556788999999999976542 3344 5899
Q ss_pred CcHHHHHHHHHHHHHHHhh
Q 011959 455 HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 455 ~t~e~i~~~l~~l~~~~~~ 473 (474)
+|++|||+++++|++++++
T Consensus 436 it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 436 ITQAECEEFIDRFEQALLA 454 (459)
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999865
No 22
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-66 Score=526.59 Aligned_cols=396 Identities=22% Similarity=0.317 Sum_probs=330.8
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHh
Q 011959 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (474)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 130 (474)
+++++++++++++++++.... ..|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++
T Consensus 13 ~~s~~~~~~~~~~~~~~~~~~--------~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~ 84 (457)
T PRK05639 13 PKAKELIEREKRVLSPGIGVK--------LFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVAL 84 (457)
T ss_pred CCHHHHHHHHHHhhccccCcC--------CCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHh
Confidence 356678888878877664211 138999999999999999999999999999999999999999999999998
Q ss_pred cCC--CC-CCCHHHHHHHHHHHhhCCC-CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCC
Q 011959 131 GTS--FG-APCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV 206 (474)
Q Consensus 131 ~~~--~~-~~~~~~~~la~~l~~~~~~-~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~ 206 (474)
... .. .+++...+|+++|++..|. .++++|+|||+||++.|+|+||.+++|.+||.++++|||++.+++..++...
T Consensus 85 ~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~ 164 (457)
T PRK05639 85 IQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQS 164 (457)
T ss_pred ccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCc
Confidence 532 22 3467889999999999984 5899999999999999999999999999999999999999999998776421
Q ss_pred -ccCCC-CCCCCCCCCCCCceEEccCC-------------CH--------HHHHHHHhc---CCCCeEEEEEccccCCCC
Q 011959 207 -ATLGL-PDSPGVPKGATYETLTAPFN-------------DV--------SALENLFEN---NKGEIAAIILEPVVGNSG 260 (474)
Q Consensus 207 -~~~~~-~~~~g~~~~~~~~~~~~~~~-------------d~--------~~le~~l~~---~~~~~a~vi~ep~~~~~G 260 (474)
....+ |..+ ++..+|++ |. +.+++.+.. .++++++||+||+++++|
T Consensus 165 ~~~~~~~~~~~--------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG 236 (457)
T PRK05639 165 SQKRGFSPLMP--------NVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAG 236 (457)
T ss_pred ccccCCCCCCC--------CceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCC
Confidence 11111 1111 12333332 22 245555432 357899999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCC
Q 011959 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG 339 (474)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~ 339 (474)
.+.|+++||++|+++|++||++||+||||+|| |+|.+|+++++|+.||++||||+++||+|+|++++++++++...
T Consensus 237 ~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~~~~--- 313 (457)
T PRK05639 237 IVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMDLTS--- 313 (457)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHhhcC---
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999998432
Q ss_pred CcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccc
Q 011959 340 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 419 (474)
Q Consensus 340 ~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~ 419 (474)
..+.+|+++||++|++++++|+.++++++++++++++++|+++|+++..+++++.+++|.|+|+++++..+..
T Consensus 314 -~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~------ 386 (457)
T PRK05639 314 -GSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENG------ 386 (457)
T ss_pred -CCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCC------
Confidence 1245799999999999999999999999999999999999999999988899999999999999999964321
Q ss_pred cccchHHHHHHHHHHHHCCeEecccCC--cceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 420 KKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.++......+.+.|+++|+++.+.+. +.+++ ++++|++|+|+++++|++++++
T Consensus 387 -~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 387 -KPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred -CCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 13344557889999999999987642 44554 7999999999999999999864
No 23
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.4e-67 Score=529.48 Aligned_cols=383 Identities=22% Similarity=0.296 Sum_probs=321.8
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCCC-CC
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVPS-IE 156 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~la~~l~~~~~~-~~ 156 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++. ..++.++...+|+++|++..|+ .+
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~ 115 (453)
T PRK06943 36 PLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLG 115 (453)
T ss_pred CCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 3889999999999999999999999999999999999999999999999853 2346788999999999999874 57
Q ss_pred eEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEcc
Q 011959 157 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP 229 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~ 229 (474)
+++|++||+||++.|+|+||.+ ++|.+||.++++|||++.++++.++.......+ |...++......+....+
T Consensus 116 ~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (453)
T PRK06943 116 HAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGAR 195 (453)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccc
Confidence 9999999999999999999654 578999999999999999999988754332211 111111000000000001
Q ss_pred ---------CCCHHHHHHHHhcCCCCeEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc
Q 011959 230 ---------FNDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 298 (474)
Q Consensus 230 ---------~~d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~ 298 (474)
.+++++++++++++++++++||+|| +++++|.+.|+++||++|+++|++||++||+|||+||| |+|.+|
T Consensus 196 ~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f 275 (453)
T PRK06943 196 PGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF 275 (453)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh
Confidence 1346888888887778999999999 59999999999999999999999999999999999999 999999
Q ss_pred cccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCC---CCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHH
Q 011959 299 AQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 374 (474)
Q Consensus 299 ~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 374 (474)
+++++|+.||++|+||+++|| +|+|++++++++++.+... ..+.+++||++||++|++++++|++++++++.++++
T Consensus 276 a~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~ 355 (453)
T PRK06943 276 ACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNA 355 (453)
T ss_pred HHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999999999999 5999999999999988632 134588899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--e
Q 011959 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--S 452 (474)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~ 452 (474)
+++++|+++|+++. +++.+.++++.|+|+++++..+. .++......+.+.|+++||++.+.+ ..+++ +
T Consensus 356 ~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gvel~~~~--------~~~~~~~~~i~~~~~~~Gll~~~~g-~~l~~~Pp 425 (453)
T PRK06943 356 RKSARLRAALAPLA-AHPQVRHLRQRGTIFAFDVALDG--------DAARTFSRRFFEAALERELLLRPIG-TTVYLMPP 425 (453)
T ss_pred HHHHHHHHHHHHHh-cCCCEEeEeccccEEEEEEccCC--------CcchHHHHHHHHHHHHCCcEEEecC-CEEEEeCC
Confidence 99999999999984 57778899999999999997421 1122335678899999999998765 34554 5
Q ss_pred cCCcHHHHHHHHHHHHHHHhh
Q 011959 453 LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 453 ~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+++|++|||+++++|++++++
T Consensus 426 l~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 426 YVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred CcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999875
No 24
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=4.3e-67 Score=525.42 Aligned_cols=368 Identities=27% Similarity=0.392 Sum_probs=321.1
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCC-CCeE
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPS-IEMV 158 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~-~~~v 158 (474)
++++.+++|+|+||.|||+||||.+++++.++||+||+|++|+.+|+++..... ..++...+|+++|++.+|+ .+++
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v 137 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYS 137 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEE
Confidence 445677777999999999999999999999999999999999999999854332 4588899999999999984 5899
Q ss_pred EEeCCHHHHHHHHHHHhHhhc---CCcEEEEEeCCCCCCchhHHHhcCCCCccCC-CCCCCCCCCCCCCceEEccCCCHH
Q 011959 159 RFVNSGTEACMGVLRLARAFT---GRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDSPGVPKGATYETLTAPFNDVS 234 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~---~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~d~~ 234 (474)
+|+|||+||++.|+|+||.++ ++.+||.++++|||++.+++..++....... .|.. ..+..+|++|++
T Consensus 138 ~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~--------~~~~~~p~~d~~ 209 (442)
T TIGR03372 138 FFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLL--------PGFHHVAFGDIE 209 (442)
T ss_pred EEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCC--------CCCEEeCCCCHH
Confidence 999999999999999999996 7889999999999999999988875332211 1111 235778999999
Q ss_pred HHHHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee
Q 011959 235 ALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 310 (474)
Q Consensus 235 ~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~ 310 (474)
.+++.+++ +++++++||+||+++++|.+.|+++||++|+++|++||+++|+||||+|| |+|.+|+++++|+.||++
T Consensus 210 ~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv 289 (442)
T TIGR03372 210 AMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDIL 289 (442)
T ss_pred HHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCee
Confidence 98888753 45689999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred ehhhhcCCC-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh
Q 011959 311 TLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK 389 (474)
Q Consensus 311 t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 389 (474)
||||++++| +|+|++++++++++.+.. ....+++||++||++|++++++|+.++++++.+++++++++|+++|+++..
T Consensus 290 t~gK~lg~G~~Pigavv~~~~i~~~~~~-~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~ 368 (442)
T TIGR03372 290 CLAKALGGGVMPIGATIATEAVFSVLFD-NPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAA 368 (442)
T ss_pred eehhhhcCCcccceEEEecHHHHHhhhc-cCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 699999999999998842 245678999999999999999999999889999999999999999999988
Q ss_pred hcC-CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC--cceE--EecCCcHHHHHHHH
Q 011959 390 KAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLAHSSDDIQHTI 464 (474)
Q Consensus 390 ~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~--~~~~~t~e~i~~~l 464 (474)
+++ .+.++++.|+|+++++.++ .....+.+.|+++||++.+.+. +.++ +++++|++++|+++
T Consensus 369 ~~~~~i~~vRG~Gl~~giel~~~-------------~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~ 435 (442)
T TIGR03372 369 EYPDLIIEARGKGLLMAIEFRDN-------------EIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVI 435 (442)
T ss_pred hCCCceEEEecceEEEEEEeCCh-------------HHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHH
Confidence 888 7889999999999999642 2336788999999999976532 3454 47999999999999
Q ss_pred HHHHHHH
Q 011959 465 TAAEKVL 471 (474)
Q Consensus 465 ~~l~~~~ 471 (474)
++|++++
T Consensus 436 ~~l~~~~ 442 (442)
T TIGR03372 436 KAAKDAL 442 (442)
T ss_pred HHHHHhC
Confidence 9999864
No 25
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=8.4e-67 Score=528.98 Aligned_cols=416 Identities=23% Similarity=0.307 Sum_probs=336.2
Q ss_pred hHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc
Q 011959 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG 131 (474)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~ 131 (474)
.+.++.++.+++++.+.... +.+. ...|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l 88 (460)
T PRK06916 12 TYEELSEKNKAYVWHPFTQM-KDYL--EEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKI 88 (460)
T ss_pred ChHHHHHHHhhccccccccc-cccc--cCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhC
Confidence 44677777777665443311 1111 12489999999999999999999999999999999999999999999999984
Q ss_pred C---CCCCCCHHHHHHHHHHHhhCCC-CCeEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHh
Q 011959 132 T---SFGAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVK 201 (474)
Q Consensus 132 ~---~~~~~~~~~~~la~~l~~~~~~-~~~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~ 201 (474)
. .++..++...+|+++|++.+|. .++++|+|||+||++.|+|+||.+ ++|.+||.++++|||++.++++.
T Consensus 89 ~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~ 168 (460)
T PRK06916 89 AHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSV 168 (460)
T ss_pred CCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhc
Confidence 2 2345788899999999999984 689999999999999999999985 67899999999999999999988
Q ss_pred cCCCCccCCC-CCCCCCCCCCCCceEEccC---------CCHHHHHHHHhcCCCCeEEEEEcc-ccCCCCcccCCHHHHH
Q 011959 202 AGSGVATLGL-PDSPGVPKGATYETLTAPF---------NDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLN 270 (474)
Q Consensus 202 ~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~---------~d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~ 270 (474)
++.......+ |...++......+.+..++ ++++.++++++++++++++||+|| +++++|.+.|+++||+
T Consensus 169 s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~ 248 (460)
T PRK06916 169 GAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLK 248 (460)
T ss_pred cCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHH
Confidence 7754322111 1111111000011111111 146778888887778999999999 6999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCC----CCcccc
Q 011959 271 AIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQA 344 (474)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~----~~~~~~ 344 (474)
+|+++|++||++||+|||+||| |+|.+|+++++|+.||++|+||+++|| +|+|++++++++++.+... ....++
T Consensus 249 ~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~ 328 (460)
T PRK06916 249 GLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHG 328 (460)
T ss_pred HHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccC
Confidence 9999999999999999999999 999999999999999999999999999 5999999999999887531 235678
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccch
Q 011959 345 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSET 424 (474)
Q Consensus 345 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~ 424 (474)
+||++||++|++++++|+.+++++++++++++++++++.|+++. +++.+.++++.|+|+++++.++... ......+.
T Consensus 329 ~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Glm~giel~~~~~~--~~~~~~~~ 405 (460)
T PRK06916 329 HSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLF-ALKHVGDIRQLGLMVGIELVKNKET--KEPFEWTE 405 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh-cCCCeEEeecCCceeeEEeeccccc--ccCCCchh
Confidence 89999999999999999999989999999999999999999985 4788899999999999999754211 00011122
Q ss_pred HHHHHHHHHHHHCCeEecccCCcceE--EecCCcHHHHHHHHHHHHHHHhhC
Q 011959 425 TKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 425 ~~~~~~~~~l~~~Gv~v~~~~~~~~~--~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
.....+.+.|+++||++.+.+ ..++ +++++|++||++++++|+++++++
T Consensus 406 ~~~~~i~~~~~~~Gvl~~~~g-~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 406 RVGVQVCKRSRELGMLTRPLG-NTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred hHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 234678899999999998865 3343 379999999999999999998763
No 26
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.8e-66 Score=525.85 Aligned_cols=388 Identities=24% Similarity=0.317 Sum_probs=319.9
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCCC----
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVPS---- 154 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~la~~l~~~~~~---- 154 (474)
|+.+++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++.. .+++.++...+|+++|.+.+|.
T Consensus 47 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 126 (472)
T PRK08742 47 LVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGR 126 (472)
T ss_pred CeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccC
Confidence 578999999999999999999999999999999999999999999998642 2346788899999999999873
Q ss_pred --CCeEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCce
Q 011959 155 --IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYET 225 (474)
Q Consensus 155 --~~~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~ 225 (474)
.++|+|++||+||++.|+|+||.+ ++|.+||.++++|||++.++++.++.......+ |..+++......+.
T Consensus 127 ~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~ 206 (472)
T PRK08742 127 APLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDA 206 (472)
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCc
Confidence 579999999999999999999998 568899999999999999999987754322111 11111111101111
Q ss_pred EEccCC---------CHHHHHHHHhcCCCCeEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc
Q 011959 226 LTAPFN---------DVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294 (474)
Q Consensus 226 ~~~~~~---------d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~ 294 (474)
+..++. +++.+++++.++++++++||+|| +++++|.+.|+++||++|+++|++||++||+|||+||| |+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRt 286 (472)
T PRK08742 207 YLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRT 286 (472)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence 111111 35777888876667999999999 69999999999999999999999999999999999999 99
Q ss_pred CCCccccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC---CCcccccCCCCChHHHHHHHHHHHHhcCCCHH
Q 011959 295 AYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (474)
Q Consensus 295 g~~~~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (474)
|.+|+++++|+.||++|+||+++||+ |+|++++++++++.+... ..+.|++||++||++|++++++|++++++++.
T Consensus 287 G~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~ 366 (472)
T PRK08742 287 GTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVI 366 (472)
T ss_pred ccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHH
Confidence 99999999999999999999999995 999999999999987531 23468899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceE
Q 011959 371 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF 450 (474)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~ 450 (474)
+++++++++|++.++.+ .+++.+.++++.|+|++++|..+.... ....++......+.+.|+++||++.+.+ +.++
T Consensus 367 ~~~~~~g~~l~~~~~~~-~~~~~i~dvRG~Gl~~giel~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~vi~ 442 (472)
T PRK08742 367 ARNQPTAARMTQLAAQI-GEHPHVADVRQAGMVVAFELTRGGNKR--TPFPPAARVGLHAYRAALARGVVLRPLG-DVLY 442 (472)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCeeeEeccceEEEEEeccCcccc--ccCCchhHHHHHHHHHHHHCCeEEEecC-CEEE
Confidence 99999999999777664 668889999999999999997532110 0001122234677889999999998865 4555
Q ss_pred E--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 451 T--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 451 ~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+ ++++|++||++++++|++++++
T Consensus 443 ~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 443 WMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHH
Confidence 4 7999999999999999999875
No 27
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.9e-66 Score=525.99 Aligned_cols=389 Identities=19% Similarity=0.294 Sum_probs=324.1
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCC-CCCe
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIEM 157 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~la~~l~~~~~-~~~~ 157 (474)
|+++++++|+|+||.|||+||||.+++|+.++||+||+|.+|+++|++++. ..++.++...+|+++|++..| +.++
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 109 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSR 109 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCE
Confidence 568999999999999999999999999999999999999999999999853 235678899999999999988 5789
Q ss_pred EEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEc--
Q 011959 158 VRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA-- 228 (474)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~-- 228 (474)
|+|+|||+||++.|+|+||.+ ++|.+||.+.++|||++.++++.++.......+ |..+++......+.+..
T Consensus 110 v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 189 (466)
T PRK07030 110 CFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPE 189 (466)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcccccc
Confidence 999999999999999999887 578899999999999999999887754322111 11111111100111111
Q ss_pred -------cCCCHHHHHHHHhcCCCCeEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc
Q 011959 229 -------PFNDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299 (474)
Q Consensus 229 -------~~~d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~ 299 (474)
+.++++.+++++.++++++++||+|| +++++|.+.++++|+++|+++|++||++||+|||+||| |+|.+|+
T Consensus 190 ~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a 269 (466)
T PRK07030 190 GMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFA 269 (466)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchH
Confidence 12346778888887778999999999 79999999999999999999999999999999999999 9999999
Q ss_pred ccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC----CCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHH
Q 011959 300 QEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 374 (474)
Q Consensus 300 ~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 374 (474)
++++|+.||++|++|+++||+ |+|++++++++++.+... ....|++||++||++|++++++|++++++++.++++
T Consensus 270 ~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~ 349 (466)
T PRK07030 270 CEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNR 349 (466)
T ss_pred HHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999999999995 999999999999987521 234688999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceE--Ee
Q 011959 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TS 452 (474)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~--~~ 452 (474)
+++++|+++|+++. +++.+.++++.|+|+++++..++...- +. ..+......+.+.|+++|+++.+.+ ..++ ++
T Consensus 350 ~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~-~~-~~~~~~~~~i~~~~~~~Gvl~~~~g-~~i~~~Pp 425 (466)
T PRK07030 350 ALARRMAEATAHLA-DHPHVAEVRQTGMILAIEMVQDKASKT-PY-PWQERRGLKVYQHALERGALLRPLG-SVVYFLPP 425 (466)
T ss_pred HHHHHHHHHHHHHh-cCCCEEEeEeceeEEEEEeccCccccc-cC-cchhHHHHHHHHHHHHCCeEEEecC-CEEEEECC
Confidence 99999999999884 688899999999999999975432110 00 0122234578899999999998865 3444 37
Q ss_pred cCCcHHHHHHHHHHHHHHHhhC
Q 011959 453 LAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 453 ~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
+++|++||++++++|+++++++
T Consensus 426 l~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 426 YVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998763
No 28
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-66 Score=524.02 Aligned_cols=385 Identities=23% Similarity=0.309 Sum_probs=322.3
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CC-CCCCHHHHHHHHHHHhhCC-CCC
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SF-GAPCLLENVLAEMVISAVP-SIE 156 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~la~~l~~~~~-~~~ 156 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++. .. .+.++...+|+++|++..| +.+
T Consensus 12 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 91 (443)
T PRK07483 12 TLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLE 91 (443)
T ss_pred CCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 4899999999999999999999999999999999999999999999999853 22 2467888999999999987 578
Q ss_pred eEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEc-
Q 011959 157 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA- 228 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~- 228 (474)
+++|+|||+||++.|+|+||.+ ++|.+||.++++|||++.++++.++.......+ |..+++ ..+..
T Consensus 92 ~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~------~~~~~~ 165 (443)
T PRK07483 92 HVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEA------HHVSPC 165 (443)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCC------EEeCCC
Confidence 9999999999999999999998 678999999999999999999888754322111 111111 01111
Q ss_pred -cCCC--------------HHHHHHHHh-cCCCCeEEEEEccccC-CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011959 229 -PFND--------------VSALENLFE-NNKGEIAAIILEPVVG-NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291 (474)
Q Consensus 229 -~~~d--------------~~~le~~l~-~~~~~~a~vi~ep~~~-~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (474)
+|++ ++++++++. .+++++++||+||+++ ++|.+.|+++||++|+++|+|||++||+|||+||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG 245 (443)
T PRK07483 166 YAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCG 245 (443)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeC
Confidence 1232 256777664 3457899999999998 5899999999999999999999999999999999
Q ss_pred c-ccCCCccccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCCC-CcccccCCCCChHHHHHHHHHHHHhcCCC
Q 011959 292 F-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (474)
Q Consensus 292 ~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~~-~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (474)
| |+|.+|+++++|+.||++|+||+++||+ |+|++++++++++.+.... .+.|++||++||++|++++++|+++++++
T Consensus 246 fGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~ 325 (443)
T PRK07483 246 MGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDG 325 (443)
T ss_pred cccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 9 9999999999999999999999999996 9999999999999886421 24588999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC---
Q 011959 369 TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--- 445 (474)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--- 445 (474)
+.+++++++++|+++|+++..+++.+.+++|.|+|+++++.++.... ....++......+.+.|+++||++.+.+
T Consensus 326 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~ 403 (443)
T PRK07483 326 LLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATK--APFDPALKLHARIKREAMARGLMVYPMGGTI 403 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeeccccc--CCCCchhhHHHHHHHHHHHCCcEEEecCccc
Confidence 99999999999999999988889999999999999999997532110 0001122345678899999999997653
Q ss_pred ----CcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 446 ----FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 446 ----~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.+.+++ ++++|++|||+++++|++++++
T Consensus 404 ~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 404 DGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred cCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 134444 7999999999999999999875
No 29
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-66 Score=521.72 Aligned_cols=407 Identities=23% Similarity=0.334 Sum_probs=331.3
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHh
Q 011959 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (474)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 130 (474)
.+++++.++.++++..... ...+|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~--------~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~ 73 (445)
T PRK08593 2 SKAHQLIQEDEHYFAKSGR--------IKYYPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADK 73 (445)
T ss_pred chHHHHHHHHHHhhccccc--------cCCCCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHh
Confidence 3556677776665422110 01138999999999999999999999999999999999999999999999998
Q ss_pred cCCC---CCCCHHHHHHHHHHHhhCCCC--CeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCC
Q 011959 131 GTSF---GAPCLLENVLAEMVISAVPSI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG 205 (474)
Q Consensus 131 ~~~~---~~~~~~~~~la~~l~~~~~~~--~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~ 205 (474)
+..+ .+.++...+|+++|++.+|+. ++|+|+|||+||++.|+|+||.+++|.+||.++++|||++.++++.++..
T Consensus 74 ~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~ 153 (445)
T PRK08593 74 FIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGIS 153 (445)
T ss_pred ccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCC
Confidence 6433 246888999999999999843 79999999999999999999999999999999999999999999887742
Q ss_pred C-ccCCC-CCCCCCCCCCCCceEEcc--CCC-------HHHHHHHHhcC--CCCeEEEEEccccCCCCcccCCHHHHHHH
Q 011959 206 V-ATLGL-PDSPGVPKGATYETLTAP--FND-------VSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAI 272 (474)
Q Consensus 206 ~-~~~~~-~~~~g~~~~~~~~~~~~~--~~d-------~~~le~~l~~~--~~~~a~vi~ep~~~~~G~i~~~~~~l~~l 272 (474)
. ....+ |..+++......+....+ .++ ++++++++.++ ++++++||+||+++++|.+.|+++||++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l 233 (445)
T PRK08593 154 LNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEAL 233 (445)
T ss_pred cccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHH
Confidence 1 11111 212221100000011111 111 24555555432 46899999999999999999999999999
Q ss_pred HHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCCh
Q 011959 273 RRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 351 (474)
Q Consensus 273 ~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~ 351 (474)
+++|++||++||+||||+|| |+|.+++++++|+.||++|+||++++|+|+|++++++++++.+.. ..+.+|+++||
T Consensus 234 ~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~---~~~~~T~~~~p 310 (445)
T PRK08593 234 YKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEA---PAHLFTTGANP 310 (445)
T ss_pred HHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCcccEEEEEcHHHHhhhcc---CCCCCCCCCCH
Confidence 99999999999999999999 999988999999999999999999999999999999999998862 34567999999
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHH
Q 011959 352 LAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 431 (474)
Q Consensus 352 ~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (474)
++|++++++|+.++++++++++++++++|++.|+++..+++++.++++.|+|+++++..++.. ..++......+.
T Consensus 311 l~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~-----~~~~~~~~~~~~ 385 (445)
T PRK08593 311 VSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKL-----KTRDNEAALKIC 385 (445)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCc-----CCCcHHHHHHHH
Confidence 999999999999998899999999999999999999888999999999999999999753211 123445567889
Q ss_pred HHHHHCCeEecccCCcceE--EecCCcHHHHHHHHHHHHHHHhh
Q 011959 432 RGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 432 ~~l~~~Gv~v~~~~~~~~~--~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+.|+++||++.+.+.+.++ +++.+|++||++++++|++++++
T Consensus 386 ~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 386 NYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred HHHHHCCeEEeccCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 9999999999776545555 47999999999999999999865
No 30
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-66 Score=519.53 Aligned_cols=406 Identities=29% Similarity=0.421 Sum_probs=338.7
Q ss_pred CCchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHH
Q 011959 48 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 127 (474)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~ 127 (474)
+..++|++++++.+++++.+.. ..+|+++++++|+|+||.|||+||||.+++|+.++||+||+|.+|+.+|
T Consensus 12 ~~~~~s~~l~~~~~~~~~~~~~---------~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q 82 (441)
T PRK05769 12 LPGPKAREIIERDEKYLAQSTR---------RWYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQ 82 (441)
T ss_pred CCCccHHHHHHHHHHhhCcccc---------cCCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHH
Confidence 3345677788877777765421 1148999999999999999999999999999999999999999999999
Q ss_pred HHhcCCC---CCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhc
Q 011959 128 MKKGTSF---GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKA 202 (474)
Q Consensus 128 ~~~~~~~---~~~~~~~~~la~~l~~~~~--~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~ 202 (474)
++++... .+.++...+|+++|++..| ..++|+|+|||+||++.|+|+||.+++|.+||.++++|||++.++++.+
T Consensus 83 l~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t 162 (441)
T PRK05769 83 AEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLT 162 (441)
T ss_pred HHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhc
Confidence 9986433 2457889999999999997 3589999999999999999999999999999999999999999999887
Q ss_pred CCCC-ccCCC-CCCCCCCCCCCCceEEccCC--C--------HHHHHH-HHhc--CCCCeEEEEEccccCCCCcccCCHH
Q 011959 203 GSGV-ATLGL-PDSPGVPKGATYETLTAPFN--D--------VSALEN-LFEN--NKGEIAAIILEPVVGNSGFIAPKPD 267 (474)
Q Consensus 203 g~~~-~~~~~-~~~~g~~~~~~~~~~~~~~~--d--------~~~le~-~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~ 267 (474)
+... ....+ |..+++......+.+..|++ | ++.+++ ++++ +++++++||+||+++++|.+.|+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~ 242 (441)
T PRK05769 163 ASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKN 242 (441)
T ss_pred CCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHH
Confidence 5421 11111 33334433333344455554 1 344666 4432 3568999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccC
Q 011959 268 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGT 346 (474)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t 346 (474)
||++|+++|++||+++|+||||+|| |+|.+++++++|+.||++||||++++|+|+|++++++++++.+. ..+.+|
T Consensus 243 ~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G~p~gav~~~~~i~~~~~----~~~~~T 318 (441)
T PRK05769 243 FFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFLPP----GSHANT 318 (441)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCCcccEEEEEehhhhhcCC----CCCCCC
Confidence 9999999999999999999999999 99998899999999999999999999999999999999986432 357789
Q ss_pred CCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHH
Q 011959 347 LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 426 (474)
Q Consensus 347 ~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 426 (474)
|++||++|++++++|+++++ ++++++++++++|++.|+++..+++++.++++.|+|++++|.+++ ..++...
T Consensus 319 ~~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-------~~~~~~~ 390 (441)
T PRK05769 319 FGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR-------KEPDPKL 390 (441)
T ss_pred CCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC-------ccccHHH
Confidence 99999999999999999988 999999999999999999998888989999999999999996532 1233445
Q ss_pred HHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHHhhC
Q 011959 427 FARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 427 ~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
...+.+.|+++||++.+.+.+.+++ ++++|++|||+++++|+++++++
T Consensus 391 ~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 391 RDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5778899999999998876555555 68899999999999999998753
No 31
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-65 Score=518.64 Aligned_cols=419 Identities=21% Similarity=0.283 Sum_probs=337.8
Q ss_pred chhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHH
Q 011959 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 129 (474)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~ 129 (474)
..+|.++.++.+++++.++.+. ..+. ...|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~ 82 (460)
T PRK06541 6 VNSDTDLQALAKRHLWMHFTRH-GAYI--DAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAG 82 (460)
T ss_pred cccHHHHHHHhhcccccCccCc-cccc--cCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHh
Confidence 3456777777777777655433 1111 113788999999999999999999999999999999999999999999999
Q ss_pred hcC---CCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhh---c---CCcEEEEEeCCCCCCchhHH
Q 011959 130 KGT---SFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF---T---GRERIIKFEGCYHGHADPFL 199 (474)
Q Consensus 130 ~~~---~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~---~---~~~~ii~~~~~yhg~~~~~~ 199 (474)
+.. .+.+.++...+|+++|++..| +.++++|++||+||++.|+|+||.+ + +|.+||.++++|||++.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~ 162 (460)
T PRK06541 83 TLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGAL 162 (460)
T ss_pred hCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhh
Confidence 853 335678889999999999987 4789999999999999999999988 3 47899999999999999999
Q ss_pred HhcCCCCccCC-CCCCCCCCCCCCCceEEcc-CC-C--------HHHHHHHHhc-CCCCeEEEEEccccCCCCcccCCHH
Q 011959 200 VKAGSGVATLG-LPDSPGVPKGATYETLTAP-FN-D--------VSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPD 267 (474)
Q Consensus 200 ~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~-~~-d--------~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~ 267 (474)
+.++....... .|..+++......+.+..| ++ + ++.+++++++ +++++++||+||+++++|.+.++++
T Consensus 163 s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~ 242 (460)
T PRK06541 163 AITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPG 242 (460)
T ss_pred cCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHH
Confidence 88775432211 1223333222222333333 32 2 3678888864 3568999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC-CCcccc
Q 011959 268 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA-GPMYQA 344 (474)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~-~~~~~~ 344 (474)
||++|+++|++||++||+||||+|| |+|.+|+++++|+.||++||||++++|+ |+|++++++++++.+... ....+.
T Consensus 243 yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~ 322 (460)
T PRK06541 243 YFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHG 322 (460)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccC
Confidence 9999999999999999999999999 9999999999999999999999999997 999999999999988643 234567
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCc--Cccccccc
Q 011959 345 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY--NFEDAKKS 422 (474)
Q Consensus 345 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~--~~~~~~~~ 422 (474)
+|+++||+++++++++|+.++++++++++++++++|+++|+++.. ++++.++++.|+|++++|.++... ++... ..
T Consensus 323 ~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~-~~ 400 (460)
T PRK06541 323 YTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDD-ES 400 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEEEEEEecCcccccCCcch-hh
Confidence 899999999999999999998889999999999999999998865 788889999999999999753211 11000 00
Q ss_pred chHHHHHHHHHHHHCCeEeccc--CCcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 423 ETTKFARFYRGMLEEGVYFAPS--QFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 423 ~~~~~~~~~~~l~~~Gv~v~~~--~~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+......+.+.|+++||++.+. +.+.+++ ++++|++|||+++++|++++++
T Consensus 401 ~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 401 ERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred hhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1112236788999999999874 3344544 6889999999999999999865
No 32
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=8.9e-66 Score=524.13 Aligned_cols=389 Identities=24% Similarity=0.318 Sum_probs=318.6
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC----CCCCHHHHHHHHHHHhhCC--C
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF----GAPCLLENVLAEMVISAVP--S 154 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~----~~~~~~~~~la~~l~~~~~--~ 154 (474)
.|+++++++|+|+||.|||+||||.+++|+++|||+||+|++|+++|++++..+ +.+++...+|+++|.+.++ +
T Consensus 71 ~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 150 (504)
T PLN02760 71 EPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARK 150 (504)
T ss_pred CCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCC
Confidence 489999999999999999999999999999999999999999999999985422 3578889999999999864 3
Q ss_pred CCeEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEE
Q 011959 155 IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLT 227 (474)
Q Consensus 155 ~~~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~ 227 (474)
.++++|+|||+|||+.|||+||.+ +++.+||.++++|||++..++.++|.......+ +..+++.+......+.
T Consensus 151 ~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~ 230 (504)
T PLN02760 151 MGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWR 230 (504)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccc
Confidence 578999999999999999999876 357899999999999999888877753321111 1111111111111111
Q ss_pred c--cCCC--------HHHHHHHHh-cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccC
Q 011959 228 A--PFND--------VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA 295 (474)
Q Consensus 228 ~--~~~d--------~~~le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g 295 (474)
+ |..+ .++|++++. ++++++++||+||+++++|++.|+++|+++|+++|++||++||+|||+||| |+|
T Consensus 231 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG 310 (504)
T PLN02760 231 FHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLG 310 (504)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccc
Confidence 1 1111 245777664 445689999999999999999999999999999999999999999999999 999
Q ss_pred CCccccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC----CCcccccCCCCChHHHHHHHHHHHHhcCCCHH
Q 011959 296 YGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (474)
.+|+++++|+.||++||||++++|+ |+|++++++++++.+... ..+.+++||++||++|++++++|++++++++.
T Consensus 311 ~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~ 390 (504)
T PLN02760 311 TMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIP 390 (504)
T ss_pred hhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 9999999999999999999999985 999999999999988632 13458899999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceE
Q 011959 371 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF 450 (474)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~ 450 (474)
+++++++++|+++|+++ .+++++.+++|.|+|+++++.++.... ....++......+.+.|+++||++.+.+ ..++
T Consensus 391 ~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~--~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~lr 466 (504)
T PLN02760 391 EHVNKIAPRFQDGIKAF-SGSPIIGEIRGTGLILGTEFVDNKSPN--DPFPAEWGVGAYFGAECKKRGMLVRVAG-DNIM 466 (504)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCeeeEEeCceEEEEEEecCCccc--ccccchhHHHHHHHHHHHhCCcEEEecC-CEEE
Confidence 99999999999999997 678889999999999999997542110 0011122345678899999999998765 3455
Q ss_pred E--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 451 T--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 451 ~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+ ++++|++|||+++++|++++++
T Consensus 467 l~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 467 MSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHH
Confidence 5 5889999999999999999864
No 33
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=6.4e-66 Score=521.57 Aligned_cols=389 Identities=24% Similarity=0.357 Sum_probs=318.2
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCCCC--
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPSI-- 155 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~la~~l~~~~~~~-- 155 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|++++.. ..++++...+|+++|++.+|+.
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 100 (442)
T TIGR00709 21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKM 100 (442)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCC
Confidence 38899999999999999999999999999999999999999999999988532 2257888999999999999742
Q ss_pred -Ce-EEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEccCC-
Q 011959 156 -EM-VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN- 231 (474)
Q Consensus 156 -~~-v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~- 231 (474)
.+ ++|+|||+||++.|||+||.+++|.+||.++++|||++.++++.++......++ +..+++......+.+..+++
T Consensus 101 ~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (442)
T TIGR00709 101 DYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGI 180 (442)
T ss_pred CccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccC
Confidence 34 555699999999999999999999999999999999999999887743221111 11222221112223334443
Q ss_pred ----CH----HHHHHHHh---cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc
Q 011959 232 ----DV----SALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299 (474)
Q Consensus 232 ----d~----~~le~~l~---~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~ 299 (474)
+. +.+++.+. ..++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a 260 (442)
T TIGR00709 181 GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFA 260 (442)
T ss_pred CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhH
Confidence 12 22344443 234679999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 011959 300 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 379 (474)
Q Consensus 300 ~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 379 (474)
++++|+.||++|+||++++|+|+|+++++++ ++.+. ...+.+||++||++|++++++|+.++++++.+++++++++
T Consensus 261 ~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~-~~~~~---~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~ 336 (442)
T TIGR00709 261 FEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQ---PAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGER 336 (442)
T ss_pred HHHcCCCCcEEEEcccccCCcccEEEEEchH-HhccC---CCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999988 45554 3457789999999999999999999889999999999999
Q ss_pred HHHHHHHHhhhcCCeeEEeeeceeEEEEEecCC-CcCcccccccchHHHHHHHHHHHHCCeEecccC--Ccce--EEecC
Q 011959 380 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAG--FTSLA 454 (474)
Q Consensus 380 l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~--~~~~~ 454 (474)
|+++|+++..+++++.+++|.|+|++++|.++. ..+......++......+...|+++||++.+.+ .+.+ .++++
T Consensus 337 l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~ 416 (442)
T TIGR00709 337 ITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPIT 416 (442)
T ss_pred HHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCC
Confidence 999999998889999999999999999997532 122111112233456778899999999997754 2333 45899
Q ss_pred CcHHHHHHHHHHHHHHHhh
Q 011959 455 HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 455 ~t~e~i~~~l~~l~~~~~~ 473 (474)
+|++++++++++|++++++
T Consensus 417 it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 417 IDQEECEEGISRFKQAVEE 435 (442)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999865
No 34
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-65 Score=511.81 Aligned_cols=377 Identities=28% Similarity=0.390 Sum_probs=323.2
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHhhCCC--CC
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS--IE 156 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~la~~l~~~~~~--~~ 156 (474)
|+++++++|+|+||.|||+||||.+|+++.++||+||+|.+|+++|+++.... .++++...+|+++|++.+|+ .+
T Consensus 23 p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~ 102 (425)
T PRK07495 23 QIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAK 102 (425)
T ss_pred CeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCC
Confidence 88999999999999999999999999999999999999999999999985422 35678889999999999984 37
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCC-CccCCCCCCCCCCCCCCCceEEccCCC---
Q 011959 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFND--- 232 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~d--- 232 (474)
+++|+|||+||++.|+|+||.++++.+||.++++|||++.+++..++.. .....+ ... ..++..+|+++
T Consensus 103 ~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~ 175 (425)
T PRK07495 103 KTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF------GAM-MPDVYHVPFPVELH 175 (425)
T ss_pred EEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC------CCC-CCCeEEecCCcccc
Confidence 9999999999999999999999999999999999999999888877642 111111 110 12344555543
Q ss_pred -------HHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccc
Q 011959 233 -------VSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 302 (474)
Q Consensus 233 -------~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~ 302 (474)
++++++++++ +++++++||+||+++++|.+.++++|+++|+++|++||++||+||||+|| |+|.++++++
T Consensus 176 g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~ 255 (425)
T PRK07495 176 GVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEH 255 (425)
T ss_pred cccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecc
Confidence 5666877763 34689999999999999999999999999999999999999999999999 9998888999
Q ss_pred cCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 011959 303 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 382 (474)
Q Consensus 303 ~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 382 (474)
+|+.||++||||++++|+|+|++++++++++.+.. ..+.+||++||++|++++++|+.++++++.++++++++++++
T Consensus 256 ~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 332 (425)
T PRK07495 256 HEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGP---GGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQ 332 (425)
T ss_pred cCCCCCEEeehhhhcCCccceEEEEcHHHHhccCC---CCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998863 346789999999999999999999888999999999999999
Q ss_pred HHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC--cceEE--ecCCcHH
Q 011959 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSD 458 (474)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~--~~~~t~e 458 (474)
+|+++..+++.+.++++.|+|+++++.+... ..++......+.+.|+++|+++.+.+. +.+++ ++++|++
T Consensus 333 ~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~------~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~ 406 (425)
T PRK07495 333 RLASLRETVPEIADIRGPGFMNAVEFNDADS------GLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDD 406 (425)
T ss_pred HHHHHHhhCCCeeeeecCceEEEEEEecCCC------CCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHH
Confidence 9999988888889999999999999965321 123444567789999999999976542 44444 7999999
Q ss_pred HHHHHHHHHHHHHhhC
Q 011959 459 DIQHTITAAEKVLRQI 474 (474)
Q Consensus 459 ~i~~~l~~l~~~~~~~ 474 (474)
++|+++++|+++++++
T Consensus 407 ~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 407 VFAEALDILEASILEA 422 (425)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998753
No 35
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-65 Score=518.16 Aligned_cols=389 Identities=21% Similarity=0.298 Sum_probs=318.5
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC---CCC-CCCHHHHHHHHHHHhhCCC-C
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFG-APCLLENVLAEMVISAVPS-I 155 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~-~~~~~~~~la~~l~~~~~~-~ 155 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++.. .++ .+++...+|+++|.+..|+ .
T Consensus 33 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 112 (466)
T PRK07036 33 GSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL 112 (466)
T ss_pred CCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc
Confidence 4899999999999999999999999999999999999999999999998842 233 5788899999999999984 7
Q ss_pred CeEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEc
Q 011959 156 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 228 (474)
Q Consensus 156 ~~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~ 228 (474)
++|+|+|||+||++.|+|+||.+ ++|.+||.++++|||++.++++.++.......+ +...++......+.+..
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 192 (466)
T PRK07036 113 NHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRR 192 (466)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccccc
Confidence 89999999999999999999988 457899999999999999888877753322111 11111110000111111
Q ss_pred cCC---------CHHHHHHHHhc-CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC
Q 011959 229 PFN---------DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (474)
Q Consensus 229 ~~~---------d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (474)
+.+ .++.+++.+.. +++++++||+||+++++|.+.|+++|+++|+++|++||++||+|||+||| |+|.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 272 (466)
T PRK07036 193 PAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHF 272 (466)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchh
Confidence 111 13456666653 56789999999999999999999999999999999999999999999999 99988
Q ss_pred cccc-ccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC---C-CcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 298 GAQE-YFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA---G-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 298 ~~~~-~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~---~-~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
|+.+ ++|+.||++|+||+++||+ |+|++++++++++.+... . .+.+++||++||++|++++++|++++++++++
T Consensus 273 ~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~ 352 (466)
T PRK07036 273 FASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCE 352 (466)
T ss_pred hhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 8887 7999999999999999994 999999999999988632 1 24577899999999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE
Q 011959 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~ 451 (474)
++++++++|+++|+++ .+++++.++++.|+|++++|.++... .+....+......+.+.|+++||++.+.+ +.+++
T Consensus 353 ~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~~ve~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~~l 428 (466)
T PRK07036 353 HVREVGPYFEERLASL-RELPLVGDVRGDHLMACVECVADKGS--KALLPEDIAIGQRIDRHCQERGLLVRPLE-HLCVL 428 (466)
T ss_pred HHHHHHHHHHHHHHHh-ccCCCEEEEEeeceEEEEEEccCccc--cCCCCchhHHHHHHHHHHHHCCcEEeecC-CEEEE
Confidence 9999999999999876 56889999999999999999754321 01111233455678899999999998765 33444
Q ss_pred --ecCCcHHHHHHHHHHHHHHHhh
Q 011959 452 --SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 452 --~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
++++|++|||+++++|++++++
T Consensus 429 ~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 429 SPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHHH
Confidence 6899999999999999998865
No 36
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-66 Score=469.85 Aligned_cols=392 Identities=27% Similarity=0.366 Sum_probs=337.1
Q ss_pred CchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHH
Q 011959 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM 128 (474)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~ 128 (474)
....|++++++..++-....+ ..|+++.+++|+++||.+|++|+||.+++++.+.||+||.|.+++++|.
T Consensus 19 ~~~aS~~~~~~E~k~~ahnyh----------pLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~ 88 (427)
T KOG1402|consen 19 NTTASQQIMERENKYGAHNYH----------PLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQA 88 (427)
T ss_pred CccchhhhhchhhhcccccCC----------cCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHH
Confidence 344456677776665443322 2489999999999999999999999999999999999999999999999
Q ss_pred HhcCCC--CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhc--------CCcEEEEEeCCCCCCchhH
Q 011959 129 KKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT--------GRERIIKFEGCYHGHADPF 198 (474)
Q Consensus 129 ~~~~~~--~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~--------~~~~ii~~~~~yhg~~~~~ 198 (474)
++.+.. .+.++...++++.+.+++ +.++|+-+|+|.||+|.|+|+||.+. .+.+|+...++|||.+.++
T Consensus 89 ~kLtlssrafYnd~~~~f~~~vt~lf-~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~a 167 (427)
T KOG1402|consen 89 DKLTLSSRAFYNDVLGEFAEYVTKLF-GYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGA 167 (427)
T ss_pred hHhhhhhHHHhhhhHHHHHHHHHHhc-CcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeee
Confidence 985432 245777789999999999 67899999999999999999999652 3456777799999999999
Q ss_pred HHhcCCCCccCCC-CCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHH
Q 011959 199 LVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 277 (474)
Q Consensus 199 ~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~ 277 (474)
+++++..-....+ |..++ .+..+||+|.++|+.+|+. +.++++|+||+||+.|++.|+++||.++++||+
T Consensus 168 is~s~d~ds~~~fgp~~P~-------~~~~v~Y~d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCt 238 (427)
T KOG1402|consen 168 ISLSTDPDSWDGFGPFLPG-------VVDKVPYGDAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCT 238 (427)
T ss_pred EEecCCcchhhccCCCCCC-------cceeeccCCHHHHHHHhcC--CCeeEEEeeccccccceEeCCchhHHHHHHHHH
Confidence 9988774222111 33333 2678899999999999986 589999999999999999999999999999999
Q ss_pred HhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHH
Q 011959 278 ENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMT 355 (474)
Q Consensus 278 ~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~a 355 (474)
||++++|.||||||+ |+|++++++|..+.||++.|+|+|+|| +|++++++++++|-.+. +.-|++||++||++|+
T Consensus 239 kynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~---pgeHgsTyggNpLg~~ 315 (427)
T KOG1402|consen 239 KYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIK---PGEHGSTYGGNPLGCA 315 (427)
T ss_pred hhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccC---CCccccccCCChHHHH
Confidence 999999999999999 999999999999999999999999999 69999999999999887 5669999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHH
Q 011959 356 AGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 434 (474)
Q Consensus 356 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 434 (474)
+++++|+++.++++.++..+++..++.+|.++..+.+ ++.+|||+|++.++++...+. .......++-.|
T Consensus 316 vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~---------~~~~aw~~cl~l 386 (427)
T KOG1402|consen 316 VAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT---------SGQDAWDVCLAL 386 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc---------cchhHHHHHHcc
Confidence 9999999999999999999999999999999988776 567899999999999964321 123345677788
Q ss_pred HHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHHh
Q 011959 435 LEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 435 ~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.++|++..|.....+|+ ++.++++|+++.++++++.+.
T Consensus 387 k~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 387 KENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 89999999987666666 799999999999999998764
No 37
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-65 Score=511.23 Aligned_cols=394 Identities=28% Similarity=0.450 Sum_probs=334.0
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC
Q 011959 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT 132 (474)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~ 132 (474)
+.+++++.+++++.++.+. +|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~ 73 (421)
T PRK06777 3 NSELNQRRLEATPRGVGVM---------CDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFT 73 (421)
T ss_pred hHHHHHHHHHhcccccCcC---------CCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcc
Confidence 4567777778888776532 3799999999999999999999999999999999999999999999999864
Q ss_pred CCC---CCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCC-
Q 011959 133 SFG---APCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV- 206 (474)
Q Consensus 133 ~~~---~~~~~~~~la~~l~~~~~--~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~- 206 (474)
... .+++...+|+++|++..| +.++++|+|||+||++.|+|+||.+++|.+||.++++|||++.++++.++...
T Consensus 74 ~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~ 153 (421)
T PRK06777 74 HTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAP 153 (421)
T ss_pred cccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcc
Confidence 332 367788999999999987 36899999999999999999999999999999999999999999998876421
Q ss_pred ccCCC-CCCCCCCCCCCCceEEccCC----------CHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHHHHH
Q 011959 207 ATLGL-PDSPGVPKGATYETLTAPFN----------DVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIR 273 (474)
Q Consensus 207 ~~~~~-~~~~g~~~~~~~~~~~~~~~----------d~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~ 273 (474)
....+ |..+ .+..++++ +++.+++++++ +++++++||+||+++++|...++++|+++|+
T Consensus 154 ~~~~~~~~~~--------~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~ 225 (421)
T PRK06777 154 YKVGFGPFPG--------SIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALR 225 (421)
T ss_pred cccCCCCCCC--------CcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHH
Confidence 11111 1111 12333332 36778888864 4578999999999999999999999999999
Q ss_pred HHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChH
Q 011959 274 RITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPL 352 (474)
Q Consensus 274 ~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~ 352 (474)
++|++||++||+||||+|| |+|.+++++++++.||++|+||++++|+|+||+++++++++.+.. ..+.+||++||+
T Consensus 226 ~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~~~p~ 302 (421)
T PRK06777 226 TLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAP---GGLGGTYAGNPL 302 (421)
T ss_pred HHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCC---CCCCCCCCcCHH
Confidence 9999999999999999999 999888889999999999999999999999999999999998863 346789999999
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHH
Q 011959 353 AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 432 (474)
Q Consensus 353 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (474)
+|++++++|+.++++++++++++++++++++|+++..+++.+.++++.|+|+++++..+.. ..++.+....+.+
T Consensus 303 ~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~------~~~~~~~~~~l~~ 376 (421)
T PRK06777 303 AVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQT------GKPSPEFTRQYQR 376 (421)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCcc------CCccHHHHHHHHH
Confidence 9999999999998899999999999999999999988888899999999999999864211 1133345567788
Q ss_pred HHHHCCeEecccCC--cceEE--ecCCcHHHHHHHHHHHHHHHh
Q 011959 433 GMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 433 ~l~~~Gv~v~~~~~--~~~~~--~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.|+++||++.+++. +.+++ ++++|++++++++++|++++.
T Consensus 377 ~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 377 QALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred HHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 88999999988642 35555 578999999999999999875
No 38
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-65 Score=515.92 Aligned_cols=389 Identities=23% Similarity=0.290 Sum_probs=321.8
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHhhCCC-CCe
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS-IEM 157 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~la~~l~~~~~~-~~~ 157 (474)
| ++++++|+|+||.|||+||||.+++|+.++||+||+|.+|+++|++++... .+.++...+|+++|++.+|+ .++
T Consensus 15 p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 93 (447)
T PRK06917 15 P-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNW 93 (447)
T ss_pred C-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCE
Confidence 5 589999999999999999999999999999999999999999999985321 25688899999999999984 589
Q ss_pred EEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEE---
Q 011959 158 VRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLT--- 227 (474)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~--- 227 (474)
++|+|||+||++.|+|+||.+ ++|.+||.++++|||++.++++.++.......+ |...+++.........
T Consensus 94 v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 173 (447)
T PRK06917 94 SFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPV 173 (447)
T ss_pred EEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccccccc
Confidence 999999999999999999765 778999999999999999999887653221111 1111111100011111
Q ss_pred ------ccCCCHHHHHHHHhcCC-CCeEEEEEccccCC-CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc
Q 011959 228 ------APFNDVSALENLFENNK-GEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 298 (474)
Q Consensus 228 ------~~~~d~~~le~~l~~~~-~~~a~vi~ep~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~ 298 (474)
+.+++++.+++++++++ +++++||+||++++ +|.+.|+++|+++|+++|++||++||+|||++|| |+|.+|
T Consensus 174 ~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~ 253 (447)
T PRK06917 174 QKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMF 253 (447)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchh
Confidence 12335678888887653 57999999999985 6799999999999999999999999999999999 999999
Q ss_pred cccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC-CCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHH
Q 011959 299 AQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKI 376 (474)
Q Consensus 299 ~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~-~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~ 376 (474)
+++++|+.||++|+||++++|+ |+|++++++++++.+... ...++++||++||++|++++++|+.+++++++++++++
T Consensus 254 a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~ 333 (447)
T PRK06917 254 AMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEK 333 (447)
T ss_pred hHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 9999999999999999999996 999999999999988642 23457789999999999999999999888999999999
Q ss_pred HHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-------Ccce
Q 011959 377 TGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAG 449 (474)
Q Consensus 377 ~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~ 449 (474)
+++|++.|+++..+++++.++++.|+|++++|.+++.. .+...++......+.+.|+++||++.+.+ .+.+
T Consensus 334 g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i 411 (447)
T PRK06917 334 GEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKT--KQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAV 411 (447)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCc--CCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEE
Confidence 99999999999888999999999999999999754321 11111223456788899999999998753 2344
Q ss_pred EE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 450 FT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 450 ~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
++ ++++|++|||+++++|++++++
T Consensus 412 ~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 412 IIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred EEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 44 6899999999999999999875
No 39
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.8e-65 Score=514.37 Aligned_cols=381 Identities=22% Similarity=0.299 Sum_probs=319.5
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhhCCC-CCeE
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPS-IEMV 158 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~~-~~~v 158 (474)
|+++++++|+|+||.|||+||||.++ ++.++||+||+|++|+.+|+++.... .+.++...+|+++|++.+|+ .+++
T Consensus 55 ~~~i~~a~G~~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v 133 (459)
T PRK06082 55 LDVLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRV 133 (459)
T ss_pred CceEEeeeeeEEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEE
Confidence 78999999999999999999999854 78999999999999999999885322 35788999999999999984 5899
Q ss_pred EEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEccCCC-----
Q 011959 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFND----- 232 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~d----- 232 (474)
+|++||+||++.|+|+||.++++.+||.++++|||++.+++..++.......+ |..+++........+..|+++
T Consensus 134 ~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (459)
T PRK06082 134 LFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSD 213 (459)
T ss_pred EECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHH
Confidence 99999999999999999999999999999999999999998887754332211 222332222222233444554
Q ss_pred ---HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCc
Q 011959 233 ---VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308 (474)
Q Consensus 233 ---~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pd 308 (474)
++.++++++++ +++++||+||++++ |.+.|+++||++|+++|++||++||+|||++|| |+|.+|+++++|+.||
T Consensus 214 ~~~~~~l~~~i~~~-~~vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PD 291 (459)
T PRK06082 214 VHYADYLEYVIEKE-GGIGAFIAEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPD 291 (459)
T ss_pred HHHHHHHHHHHhcC-CCEEEEEECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCC
Confidence 35578888754 57999999999988 577899999999999999999999999999999 9999999999999999
Q ss_pred eeehhhhcCCC-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 011959 309 LTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 387 (474)
Q Consensus 309 i~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (474)
++|+||++++| +|+|++++++++++.+.. ...+ +||++||++|++++++|++++++++++++++++++|+++|+++
T Consensus 292 iv~~gKgl~gG~~P~~av~~~~~i~~~~~~--~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 368 (459)
T PRK06082 292 ILCIGKGLGGGLVPIAAMITKDKYNTAAQI--SLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEM 368 (459)
T ss_pred EEEecccccCCCCcceEEEEcHHHHhhccC--CCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 599999999998865531 2334 7999999999999999999988899999999999999999999
Q ss_pred hhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHH
Q 011959 388 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTIT 465 (474)
Q Consensus 388 ~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~ 465 (474)
..+++++.+++|.|+|++++|..+.. ...++......+...|+++||++.+.+.+.+++ ++++|+++||++++
T Consensus 369 ~~~~~~i~~vrG~Gl~~~ve~~~~~~-----~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~ 443 (459)
T PRK06082 369 KAKYPLIGDVRGIGLLWGVELVTDRH-----TKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALA 443 (459)
T ss_pred HhhCCCeeeeeeccceeEEEEccCcc-----ccCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHH
Confidence 88899999999999999999975321 112233445678889999999998865555555 58999999999999
Q ss_pred HHHHHHhh
Q 011959 466 AAEKVLRQ 473 (474)
Q Consensus 466 ~l~~~~~~ 473 (474)
++++++.+
T Consensus 444 ~l~~~l~~ 451 (459)
T PRK06082 444 ILEEAIAK 451 (459)
T ss_pred HHHHHHHH
Confidence 99999875
No 40
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=3.5e-65 Score=516.02 Aligned_cols=389 Identities=23% Similarity=0.289 Sum_probs=317.7
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHhhCC-CC
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SI 155 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~----~~~~~~~~~~la~~l~~~~~-~~ 155 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|++++.. +++.++...+|+++|++.+| +.
T Consensus 32 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 111 (456)
T PRK07480 32 GSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF 111 (456)
T ss_pred CCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc
Confidence 37899999999999999999999999999999999999999999999998532 24578999999999999998 47
Q ss_pred CeEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEE-
Q 011959 156 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLT- 227 (474)
Q Consensus 156 ~~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~- 227 (474)
++++|++||+||++.|+|+||.+ ++|.+||.++++|||++.++++.++........ +..+++........+.
T Consensus 112 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (456)
T PRK07480 112 NHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGE 191 (456)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCccccc
Confidence 89999999999999999999998 568899999999999999888887653221111 1111111111000111
Q ss_pred ------ccCCC--HHHHHHHH-hcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC
Q 011959 228 ------APFND--VSALENLF-ENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (474)
Q Consensus 228 ------~~~~d--~~~le~~l-~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (474)
.++++ ++.+++.+ ..+++++++||+||+++++|.+.|+++||++|+++|++||++||+|||+||| |+|.+
T Consensus 192 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 271 (456)
T PRK07480 192 GGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEW 271 (456)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcch
Confidence 11222 36676545 4455789999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhc-CCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHH-H
Q 011959 298 GAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVA-PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL-N 374 (474)
Q Consensus 298 ~~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~-~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~-~ 374 (474)
|+++++|+.||++||||+++||+ |+|++++++++++.+. ....+.+++||++||++|++++++|++++++++.+++ +
T Consensus 272 ~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~ 351 (456)
T PRK07480 272 FGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRD 351 (456)
T ss_pred hhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999999999999999999995 9999999999999883 2233468899999999999999999999989999999 6
Q ss_pred HHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceE--Ee
Q 011959 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TS 452 (474)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~--~~ 452 (474)
+++++|+++|+++ .+++++.+++|.|+|++++|.++.... .+.. ........+.+.|+++||++.+.+ +.++ ++
T Consensus 352 ~~g~~l~~~l~~l-~~~~~i~~vrG~Glm~gie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~Gll~~~~~-~~l~~~Pp 427 (456)
T PRK07480 352 DTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATR-ERFE-AGGGVGTICRDHCFANGLIMRAVG-DRMIISPP 427 (456)
T ss_pred HHHHHHHHHHHHh-hcCCCeeeEEeecceEEEEEecccccc-ccCc-chhhHHHHHHHHHHHCCcEEeecC-CEEEEECC
Confidence 9999999999995 578899999999999999997542110 0000 001223567788999999998754 3444 46
Q ss_pred cCCcHHHHHHHHHHHHHHHhh
Q 011959 453 LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 453 ~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+++|++|||+++++|++++++
T Consensus 428 l~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 428 LVITHAEIDELVEKARKALDA 448 (456)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 889999999999999999865
No 41
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=7.9e-65 Score=514.60 Aligned_cols=390 Identities=23% Similarity=0.263 Sum_probs=316.2
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHhhCCC-C
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVPS-I 155 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~----~~~~~~~~~~la~~l~~~~~~-~ 155 (474)
.|+++++++|+|+||.|||+||||.+++++.+|||+||+|++|+++|+++... ++..++...+|+++|++.+|+ .
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 115 (460)
T PRK12403 36 GPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY 115 (460)
T ss_pred CCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc
Confidence 38999999999999999999999999999999999999999999999998432 234678899999999999984 5
Q ss_pred CeEEEeCCHHHHHHHHHHHhHhhc---C---CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEE--
Q 011959 156 EMVRFVNSGTEACMGVLRLARAFT---G---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLT-- 227 (474)
Q Consensus 156 ~~v~~~~sGseA~~~al~~ar~~~---~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~-- 227 (474)
++++|+|||+|||+.|||+||.++ + +.+||.+.++|||++.+++..++........+..+++.+......+.
T Consensus 116 ~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (460)
T PRK12403 116 SHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANG 195 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccc
Confidence 899999999999999999999883 3 45678899999999999998887543221111111111100000111
Q ss_pred -----ccCCC--HHHHHHHHh-cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc
Q 011959 228 -----APFND--VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 298 (474)
Q Consensus 228 -----~~~~d--~~~le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~ 298 (474)
.++++ +++|++.+. ++++++++||+||+++++|.+.|+++||++|+++|++||++||+|||++|| |+|.+|
T Consensus 196 ~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~ 275 (460)
T PRK12403 196 GELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF 275 (460)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh
Confidence 11111 356766553 445689999999999999999999999999999999999999999999999 999999
Q ss_pred cccccCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCCC-CcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHH-H
Q 011959 299 AQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN-K 375 (474)
Q Consensus 299 ~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~~-~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~-~ 375 (474)
+++++|+.||++|+||++++|+ |+|++++++++++.+.... .+.+++||++||++|++++++|+++++++++++++ +
T Consensus 276 a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~ 355 (460)
T PRK12403 276 AHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDD 355 (460)
T ss_pred hhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 9999999999999999999995 9999999999999886322 33478899999999999999999999888999996 9
Q ss_pred HHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceE--Eec
Q 011959 376 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSL 453 (474)
Q Consensus 376 ~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~--~~~ 453 (474)
++++|++.|+++..+++++.++++.|+|++++|..+....... .........+...|+++|+++.+.+. .++ +++
T Consensus 356 ~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Gll~~~~~~-~~~l~Ppl 432 (460)
T PRK12403 356 TGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRF--ANENDLAWRCRTIGFEEGVIIRSTLG-RMIMAPAL 432 (460)
T ss_pred HHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccc--cchhHHHHHHHHHHHhCCEEEEecCC-EEEEECCC
Confidence 9999999999998889999999999999999997542211100 00112244577888999999986542 333 478
Q ss_pred CCcHHHHHHHHHHHHHHHhh
Q 011959 454 AHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 454 ~~t~e~i~~~l~~l~~~~~~ 473 (474)
++|++|+|+++++|++++++
T Consensus 433 ~it~~eid~~~~~l~~al~~ 452 (460)
T PRK12403 433 VAGRAEIDELVDKTRIAVDR 452 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999865
No 42
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.8e-65 Score=511.54 Aligned_cols=406 Identities=27% Similarity=0.382 Sum_probs=331.3
Q ss_pred hHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc
Q 011959 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG 131 (474)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~ 131 (474)
++.++.++.++++...... ...|+++++++|+|+||.|||+||||.+|+++.++||+||+|.+|+.+|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~--------~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~ 73 (443)
T PRK08360 2 KPLEIIERYSKVISPANRV--------TYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKL 73 (443)
T ss_pred CHHHHHHHHHHhccccccc--------ccCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhc
Confidence 3456666666665432110 01389999999999999999999999999999999999999999999999986
Q ss_pred CCCC---CCCHHHHHHHHHHHhhCCC-CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCC-
Q 011959 132 TSFG---APCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV- 206 (474)
Q Consensus 132 ~~~~---~~~~~~~~la~~l~~~~~~-~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~- 206 (474)
..+. ..++...+|+++|++..|. .++++|+|||+||++.|+|+||.+++|.+|+.+.++|||++.+++..++...
T Consensus 74 ~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~ 153 (443)
T PRK08360 74 IHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFP 153 (443)
T ss_pred cCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcc
Confidence 4332 3477889999999999984 5899999999999999999999999999999999999999999988876421
Q ss_pred ccCCCCCCCCCCCCCCCceEEccC---------CCHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHHHHHHH
Q 011959 207 ATLGLPDSPGVPKGATYETLTAPF---------NDVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI 275 (474)
Q Consensus 207 ~~~~~~~~~g~~~~~~~~~~~~~~---------~d~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l 275 (474)
....+...+++......+.+..++ ++++.+++++++ +++++++||+||+++++|.+.++++|+++|+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l 233 (443)
T PRK08360 154 VRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKI 233 (443)
T ss_pred cccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 111110011111000011111111 235567777764 346899999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHH
Q 011959 276 TKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAM 354 (474)
Q Consensus 276 ~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~ 354 (474)
|++||++||+||||+|| |+|.+++.+++++.||++||||++++|+|+||+++++++++.+. ...+.+|+++||++|
T Consensus 234 ~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~---~~~~~~T~~~~p~~~ 310 (443)
T PRK08360 234 LDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLP---PLAHAFTLSGNPVAS 310 (443)
T ss_pred HHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHHhhhc---CCCCCCCCCcCHHHH
Confidence 99999999999999999 99988888889999999999999999999999999999999886 344677999999999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHH
Q 011959 355 TAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 434 (474)
Q Consensus 355 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 434 (474)
++++++|+.+++++++++++++++++++.|+++..+++++.++++.|+|++++|.+++. .+.++......+.+.|
T Consensus 311 aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~-----~~~~~~~~~~~~~~~l 385 (443)
T PRK08360 311 AAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRE-----TKERAYEEAAKVVWRA 385 (443)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCc-----ccCccHHHHHHHHHHH
Confidence 99999999998889999999999999999999888889889999999999999975321 1113334456788999
Q ss_pred HHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 435 LEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 435 ~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+++|+++.+...+.+++ ++++|+++|++++++|++++++
T Consensus 386 ~~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 386 WELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred HHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999998765566666 8999999999999999999865
No 43
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=1.3e-64 Score=513.11 Aligned_cols=389 Identities=21% Similarity=0.238 Sum_probs=318.6
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC---CC-CCCCHHHHHHHHHHHhhCCC-C
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SF-GAPCLLENVLAEMVISAVPS-I 155 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~-~~~~~~~~~la~~l~~~~~~-~ 155 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|++++. .+ .+.++...+|+++|++.+|+ .
T Consensus 30 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 109 (460)
T PRK06105 30 GPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPM 109 (460)
T ss_pred CCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCC
Confidence 3899999999999999999999999999999999999999999999999853 22 24688889999999999984 6
Q ss_pred CeEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEc
Q 011959 156 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 228 (474)
Q Consensus 156 ~~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~ 228 (474)
++|+|+|||+||+++|+|+||.+ ++|.+||.++++|||++.+++..++.......+ +..+++......+.+.+
T Consensus 110 ~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~ 189 (460)
T PRK06105 110 SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRF 189 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccccc
Confidence 89999999999999999999866 468899999999999999888777643221111 11111111000011111
Q ss_pred c--C--------CCHHHHHHHHhc-CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC
Q 011959 229 P--F--------NDVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 296 (474)
Q Consensus 229 ~--~--------~d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~ 296 (474)
+ . .+++++|+++.. +++++++||+||+++++|.+.++++||++|+++|++||++||+||||||| |+|+
T Consensus 190 ~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~ 269 (460)
T PRK06105 190 GLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN 269 (460)
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch
Confidence 0 0 024667887753 45689999999999999999999999999999999999999999999999 9999
Q ss_pred CccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCC----CCcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 297 GGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 297 ~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
+|+++++|+.||++|+||+++|| +|+|++++++++++.+... +...|.+||++||++|++++++|++++++++++
T Consensus 270 ~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~ 349 (460)
T PRK06105 270 MFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVG 349 (460)
T ss_pred hhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999999999998 6999999999999988632 123478899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE
Q 011959 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~ 451 (474)
++++++++|+++|+++ .+++++.++++.|+|+++++..+.... .. ..+.......+.+.|+++||++.+.+ +.+++
T Consensus 350 ~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~-~~-~~~~~~~a~~i~~~~~~~Gvl~~~~g-~~i~l 425 (460)
T PRK06105 350 NAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATK-TP-FEPPGKVGARANAAAHEHGVISRAMG-DTLAF 425 (460)
T ss_pred HHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccC-CC-CCchhHHHHHHHHHHHHCCeEEEecC-CEEEE
Confidence 9999999999999998 778999999999999999996432110 00 00112334678889999999998864 34444
Q ss_pred --ecCCcHHHHHHHHHHHHHHHhh
Q 011959 452 --SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 452 --~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
++++|++|||+++++|++++++
T Consensus 426 ~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 426 CPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred ECCCccCHHHHHHHHHHHHHHHHH
Confidence 6889999999999999999875
No 44
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=1.9e-64 Score=512.98 Aligned_cols=408 Identities=27% Similarity=0.415 Sum_probs=334.8
Q ss_pred CchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHH
Q 011959 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM 128 (474)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~ 128 (474)
..++|++++++++++++.++.+. .|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+
T Consensus 13 ~~~~s~~~~~~~~~~~~~~~~~~---------~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~ 83 (451)
T PRK06918 13 PGPKAASLLERRQNIVPKGVSNG---------IPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQV 83 (451)
T ss_pred CCCCHHHHHHHHHHhhccccccC---------CCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHH
Confidence 34678899999999998876432 378999999999999999999999999999999999999999999999
Q ss_pred HhcCCCC---CCCHHHHHHHHHHHhhCCC-C-CeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcC
Q 011959 129 KKGTSFG---APCLLENVLAEMVISAVPS-I-EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG 203 (474)
Q Consensus 129 ~~~~~~~---~~~~~~~~la~~l~~~~~~-~-~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g 203 (474)
+++...+ +.++...+|+++|++..|+ . ++++|+|||+||++.|+|+||.+++|.+||.++++|||++.++++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~ 163 (451)
T PRK06918 84 DQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTS 163 (451)
T ss_pred HhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcC
Confidence 9864332 3578899999999999984 3 699999999999999999999999999999999999999999998776
Q ss_pred CC-CccCCC-CCCCCCCCCCCCceEEccCC-------C--HHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHH
Q 011959 204 SG-VATLGL-PDSPGVPKGATYETLTAPFN-------D--VSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (474)
Q Consensus 204 ~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~-------d--~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (474)
.. .....+ |..+++......+.+..+.+ + ++.+++++.. +++++++||+||+++++|.++|+++|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~ 243 (451)
T PRK06918 164 KVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQ 243 (451)
T ss_pred CCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHH
Confidence 42 111111 11111110000001111110 0 2345555431 3568999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCC
Q 011959 271 AIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 349 (474)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~ 349 (474)
+|+++|++||++||+||||+|| |+|.+++++++++.||+++|||++++|+|+||+++++++++.+. ...+.+|+++
T Consensus 244 ~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~---~~~~~~T~~g 320 (451)
T PRK06918 244 EVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESA---PGELGGTYAG 320 (451)
T ss_pred HHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccC---CCCcCcCCCc
Confidence 9999999999999999999999 99988888899999999999999999999999999999999886 3457789999
Q ss_pred ChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHH
Q 011959 350 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 429 (474)
Q Consensus 350 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 429 (474)
||++|+++.++|+.++++++.+++++++++++++|+++..+++.+.++++.|+|+++++..++. ...++......
T Consensus 321 ~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~-----~~~~~~~~~~~ 395 (451)
T PRK06918 321 SPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRK-----TKEPDKTLTAN 395 (451)
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCC-----cCCCcHHHHHH
Confidence 9999999999999998889999999999999999999877788888999999999999863321 11234455678
Q ss_pred HHHHHHHCCeEecccCC--cceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 430 FYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 430 ~~~~l~~~Gv~v~~~~~--~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+.+.|+++||++.+++. +.+++ ++++|+++|++++++|++++++
T Consensus 396 l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 396 ICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred HHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 88999999999988642 45565 5679999999999999999865
No 45
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=5.9e-64 Score=501.16 Aligned_cols=370 Identities=26% Similarity=0.367 Sum_probs=324.0
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++....+ ..++...+|+++|++..|..+++
T Consensus 22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~v 101 (408)
T PRK04612 22 RQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRFAEKV 101 (408)
T ss_pred CCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCCCCEE
Confidence 4889999999999999999999999999999999999999999999999864333 45788899999999998766899
Q ss_pred EEeCCHHHHHHHHHHHhHhhc-------CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC
Q 011959 159 RFVNSGTEACMGVLRLARAFT-------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~-------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 231 (474)
+|++||+||++.|+|+||.++ ++.+||.++++|||++.++++.++.......+.. ....+..+|++
T Consensus 102 ~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~-------~~~~~~~~~~~ 174 (408)
T PRK04612 102 FLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEP-------LPGGFRYVDFN 174 (408)
T ss_pred EEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCC-------CCCCceEcCCC
Confidence 999999999999999999984 3568999999999999999988775433222110 11235678899
Q ss_pred CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee
Q 011959 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 310 (474)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~ 310 (474)
|++.+++++. ++++++||+||+++++|.+.++++|+++|+++|++||++||+||||+|| |+|.+++..++++.||++
T Consensus 175 d~~~l~~~~~--~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~ 252 (408)
T PRK04612 175 DVEALEAAMA--GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIV 252 (408)
T ss_pred CHHHHHHhhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEE
Confidence 9999999886 3589999999999999999999999999999999999999999999999 999888777889999999
Q ss_pred ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh
Q 011959 311 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 390 (474)
Q Consensus 311 t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 390 (474)
||||++++|+|+|++++++++++.+.. ..+.+||++||++|+++.++|+.++++++.+++++++++++++|+++..+
T Consensus 253 t~~K~l~~G~piga~~~~~~~~~~~~~---~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~ 329 (408)
T PRK04612 253 TLAKALGGGFPIGAMLAGPKVAETMQF---GAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAE 329 (408)
T ss_pred EEcchhcCCCceEEEEECHHHHhhhcC---CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999888863 35778999999999999999999988999999999999999999999888
Q ss_pred cCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHH
Q 011959 391 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 468 (474)
Q Consensus 391 ~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~ 468 (474)
++++.+++|.|+|+++++..+ .......+.+.|+++||++.+.+.+.+++ ++.+|++||++++++|+
T Consensus 330 ~~~i~~vrg~Gl~~~i~~~~~-----------~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~ 398 (408)
T PRK04612 330 FGVFAQVRGRGLMLGAVLAPA-----------HAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLR 398 (408)
T ss_pred CCCeeeeeccceEEEEEecCc-----------hhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHH
Confidence 999999999999999999632 11234678889999999998876666666 68999999999999999
Q ss_pred HHHhh
Q 011959 469 KVLRQ 473 (474)
Q Consensus 469 ~~~~~ 473 (474)
+++++
T Consensus 399 ~~l~~ 403 (408)
T PRK04612 399 LALAD 403 (408)
T ss_pred HHHHH
Confidence 99865
No 46
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=8.4e-64 Score=503.52 Aligned_cols=374 Identities=26% Similarity=0.420 Sum_probs=320.9
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC--CCC
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP--SIE 156 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~la~~l~~~~~--~~~ 156 (474)
|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++..... ..++...+|+++|++..| +.+
T Consensus 23 ~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~ 102 (421)
T PRK09792 23 NFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA 102 (421)
T ss_pred CeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCc
Confidence 789999999999999999999999999999999999999999999999864332 367888999999999987 347
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCC-CccCCC-CCCCCCCCCCCCceEEccC----
Q 011959 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGL-PDSPGVPKGATYETLTAPF---- 230 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~~-~~~~g~~~~~~~~~~~~~~---- 230 (474)
+++|++||+||++.|+|+||.++++.+||.++++|||++.++++.++.. ....++ |... .+..+|+
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~--------~~~~v~~p~~~ 174 (421)
T PRK09792 103 KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPG--------SVYHVPYPSDL 174 (421)
T ss_pred eEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCC--------CcEEcCCCccc
Confidence 9999999999999999999999999999999999999999999887642 111111 1111 2333333
Q ss_pred ------CCHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcccc
Q 011959 231 ------NDVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE 301 (474)
Q Consensus 231 ------~d~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~ 301 (474)
++++.+++++++ +++++++||+||+++++|.+.++++|+++|+++|++||++||+|||++|| |+|.+++++
T Consensus 175 ~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~ 254 (421)
T PRK09792 175 HGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMD 254 (421)
T ss_pred ccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHH
Confidence 346888888874 34689999999999999999999999999999999999999999999999 999989999
Q ss_pred ccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 011959 302 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 381 (474)
Q Consensus 302 ~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 381 (474)
++++.||++||||++++|+|+||+++++++++.+.. ..+.+||++||++|++++++|+.++++++.+++++++++++
T Consensus 255 ~~~~~pDi~t~gK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~ 331 (421)
T PRK09792 255 HYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAP---GGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLK 331 (421)
T ss_pred hcCCCCcEEEeehhhcCCCceEEEEEcHHHHhccCC---CCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998863 34778999999999999999999988889999999999999
Q ss_pred HHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--CcceEE--ecCCcH
Q 011959 382 QGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSS 457 (474)
Q Consensus 382 ~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~~--~~~~t~ 457 (474)
+.|+++..+++.+.+++|.|+|++++|.+... ..++......+.+.|+++||++.+.+ .+.+++ ++++++
T Consensus 332 ~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~------~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~ 405 (421)
T PRK09792 332 NTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT------GEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPD 405 (421)
T ss_pred HHHHHHHHhCCCcceecccceEEEEEecCCcc------CCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCH
Confidence 99999988889888999999999999964321 12233456788999999999997543 234444 688999
Q ss_pred HHHHHHHHHHHHHHh
Q 011959 458 DDIQHTITAAEKVLR 472 (474)
Q Consensus 458 e~i~~~l~~l~~~~~ 472 (474)
++|++++++|+++++
T Consensus 406 ~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 406 AQFDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999885
No 47
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-64 Score=506.77 Aligned_cols=382 Identities=28% Similarity=0.375 Sum_probs=321.3
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHhhCC-CCCe
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEM 157 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~la~~l~~~~~-~~~~ 157 (474)
|+++++++|+|+||.|||+||||.+|+++++|||+||+|.+|+++|+++.... ...++...+|+++|++.+| +.++
T Consensus 26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~ 105 (433)
T PRK08117 26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDC 105 (433)
T ss_pred CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCE
Confidence 48999999999999999999999999999999999999999999999885322 2467889999999999996 5789
Q ss_pred EEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCC-CccCC-CCCCCCCCCCCCCce---------E
Q 011959 158 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLG-LPDSPGVPKGATYET---------L 226 (474)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~-~~~~~g~~~~~~~~~---------~ 226 (474)
++|+|||+|||+.|||+||.++++.+||.++++|||++.++++.++.. ..... .+..+++......+. .
T Consensus 106 v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (433)
T PRK08117 106 FFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPE 185 (433)
T ss_pred EEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchh
Confidence 999999999999999999999999999999999999999998776532 11111 121222110000000 1
Q ss_pred EccCCCHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcccccc
Q 011959 227 TAPFNDVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF 303 (474)
Q Consensus 227 ~~~~~d~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~ 303 (474)
...++|++++++++++ .++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+++.+++
T Consensus 186 ~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~ 265 (433)
T PRK08117 186 VCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTF 265 (433)
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhc
Confidence 1122467788888864 34689999999999999999999999999999999999999999999999 99988888899
Q ss_pred CCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011959 304 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 383 (474)
Q Consensus 304 g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~ 383 (474)
|+.||++||||++++|+|+|++++++++++.+. ...+.+||++||++|++++++|+.++++++++++++++++++++
T Consensus 266 gv~pDi~t~sK~lg~G~pigav~~~~~i~~~~~---~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~ 342 (433)
T PRK08117 266 GVVPDIMTIAKGIASGLPLSAVVASKELMEQWP---LGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALER 342 (433)
T ss_pred CCCCCEeehhhhccCCCcceeEEEcHHHHhhcc---CCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999885 34577899999999999999999998889999999999999999
Q ss_pred HHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC--cceEE--ecCCcHHH
Q 011959 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDD 459 (474)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~--~~~~t~e~ 459 (474)
|+++..+++.+.++++.|+|++++|.+++ ..++......+.+.|+++||++.+.+. ..+|+ ++.+|+++
T Consensus 343 L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~-------~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~ 415 (433)
T PRK08117 343 LEVLKEKHPVIGDVRGIGLMIGIEIVDPD-------GEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEE 415 (433)
T ss_pred HHHHHhcCCceeeeecCCcEEEEEEecCC-------CCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHH
Confidence 99988788888899999999999997542 113344556788999999999876542 45555 48999999
Q ss_pred HHHHHHHHHHHHhh
Q 011959 460 IQHTITAAEKVLRQ 473 (474)
Q Consensus 460 i~~~l~~l~~~~~~ 473 (474)
|++++++|++++++
T Consensus 416 i~~~~~~l~~~l~~ 429 (433)
T PRK08117 416 IDEGLDILDEALTE 429 (433)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 48
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.6e-64 Score=506.75 Aligned_cols=377 Identities=23% Similarity=0.313 Sum_probs=319.2
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCCe
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIEM 157 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~la~~l~~~~~-~~~~ 157 (474)
|+++++++|+|+||.|||+||||.+++|++++||+||+|.+|+++|+++... + ...++...+|+++|++..| +.++
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~ 105 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLEC 105 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCE
Confidence 5789999999999999999999999999999999999999999999998532 2 3478889999999999998 4789
Q ss_pred EEEeCCHHHHHHHHHHHhHhh-----cCCcEEEEEeCCCCCCchhHHHhcCCCC-ccCCC-CCCCCCCCCCCCc---eEE
Q 011959 158 VRFVNSGTEACMGVLRLARAF-----TGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYE---TLT 227 (474)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~-----~~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~-~~~~g~~~~~~~~---~~~ 227 (474)
++|++||+||++.|+|+||.+ ++|.+||.++++|||.+.++++.++... ....+ +..+++....... ...
T Consensus 106 v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 185 (428)
T PRK07986 106 VFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGE 185 (428)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchh
Confidence 999999999999999999998 6789999999999999999988766321 11111 1111110000000 001
Q ss_pred ccCCCHHHHHHHHhcCCCCeEEEEEccc-cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCC
Q 011959 228 APFNDVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV 305 (474)
Q Consensus 228 ~~~~d~~~le~~l~~~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~ 305 (474)
+++||++++++.++++++++++||+||+ ++++|.+.++++||++|+++|++||++||+||||+|| |+|.+|+++++|+
T Consensus 186 ~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv 265 (428)
T PRK07986 186 WDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI 265 (428)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC
Confidence 2357889999999876678999999996 8999999999999999999999999999999999999 9999999999999
Q ss_pred CCceeehhhhcCCC-cceEEEEecHHHHHhhcCCC--CcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 011959 306 TPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG--PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 382 (474)
Q Consensus 306 ~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~--~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 382 (474)
.||++||||+++|| +|+|++++++++++.+.... .+.+++||++||++|++++++|+.++++++++++++++++|++
T Consensus 266 ~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~ 345 (428)
T PRK07986 266 APDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLRE 345 (428)
T ss_pred CCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999 59999999999999986421 2457889999999999999999999988999999999999999
Q ss_pred HHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHH
Q 011959 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDI 460 (474)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i 460 (474)
.|+++. +++.+.++|+.|+|+++++..+. ....+.+.|+++||++.+.+ +.+++ ++++|++||
T Consensus 346 ~l~~l~-~~~~i~~vRg~Gl~~~ve~~~~~-------------~~~~~~~~l~~~Gl~~~~~g-~~i~~~Ppl~it~~ei 410 (428)
T PRK07986 346 ELAPLR-DAPMVADVRVLGAIGVVETTRPV-------------NMAALQRFFVEQGVWIRPFG-KLIYLMPPYIILPEQL 410 (428)
T ss_pred HHHHHh-cCCCEEeEeccceEEEEEeCCcc-------------cHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHH
Confidence 999875 47788899999999999985421 12468889999999998865 44555 799999999
Q ss_pred HHHHHHHHHHHhh
Q 011959 461 QHTITAAEKVLRQ 473 (474)
Q Consensus 461 ~~~l~~l~~~~~~ 473 (474)
++++++|++++++
T Consensus 411 ~~~~~~l~~~l~~ 423 (428)
T PRK07986 411 QRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999864
No 49
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=6.5e-64 Score=548.21 Aligned_cols=385 Identities=24% Similarity=0.298 Sum_probs=325.2
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHhhCC-CCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFGAPCLLENVLAEMVISAVP-SIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~la~~l~~~~~-~~~~v 158 (474)
.|+++++|+|+|+||.|||+||||.+++ .++||+||+|++|+++|++++ ....+.++...+|+++|++.+| +.+++
T Consensus 606 ~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v 683 (1013)
T PRK06148 606 DPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVA 683 (1013)
T ss_pred CCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEE
Confidence 4899999999999999999999999985 789999999999999999985 3445678899999999999998 46899
Q ss_pred EEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCC-CCCCCCCCCCceEEccCC--C---
Q 011959 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFN--D--- 232 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~--d--- 232 (474)
+|+|||+||++.|||+||.+|++.+||.++++|||++.+++..++........+. .+++......+.+..||+ +
T Consensus 684 ~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 763 (1013)
T PRK06148 684 FFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEH 763 (1013)
T ss_pred EEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhh
Confidence 9999999999999999999999999999999999999999887763211100011 111111111223455665 2
Q ss_pred ----HHHHHHHHh---cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC-Ccccccc
Q 011959 233 ----VSALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYF 303 (474)
Q Consensus 233 ----~~~le~~l~---~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~ 303 (474)
.+.+++.++ .+++++++||+||+++++|.+.|+++||++|+++|++||+++|+||||||| |+|. +|+++++
T Consensus 764 ~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~ 843 (1013)
T PRK06148 764 GRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQ 843 (1013)
T ss_pred HHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhc
Confidence 245666554 345689999999999999999999999999999999999999999999999 9996 8999999
Q ss_pred CCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011959 304 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 383 (474)
Q Consensus 304 g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~ 383 (474)
|+.|||+|+||++|||+|+|++++++++++.+... ..+++||++||++|++++++|++++++++++++++++++|+++
T Consensus 844 gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g--~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~ 921 (1013)
T PRK06148 844 GVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNG--MEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAG 921 (1013)
T ss_pred CCCcceeeecccccCCcceEEEEEcHHHHhhccCC--CccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988632 2367899999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC--cce--EEecCCcHHH
Q 011959 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAG--FTSLAHSSDD 459 (474)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~--~~~~~~t~e~ 459 (474)
|+++..+++++.+++|.|+|+++++..+.. ...++......+.+.|+++||++.+.+. +.+ .+++++|+++
T Consensus 922 L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~-----~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~ 996 (1013)
T PRK06148 922 LRELQDRFDIIGDVRGMGLFLGIELVTDRK-----TKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRAD 996 (1013)
T ss_pred HHHHHHhCCCceEEeeeceEEEEEecCCcc-----ccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHH
Confidence 999998999999999999999999975321 1234445567889999999999987653 333 3489999999
Q ss_pred HHHHHHHHHHHHhhC
Q 011959 460 IQHTITAAEKVLRQI 474 (474)
Q Consensus 460 i~~~l~~l~~~~~~~ 474 (474)
||+++++|+++++++
T Consensus 997 id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 997 ADHLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998763
No 50
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=1.4e-63 Score=499.99 Aligned_cols=368 Identities=29% Similarity=0.410 Sum_probs=323.4
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++.+++|+|+||.|||+||||.+++++++|||+||+|++|+.+|+++.. ..++.++...+|+++|++.. +.+++
T Consensus 17 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~-~~~~~ 95 (397)
T TIGR03246 17 APFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDAT-FADKV 95 (397)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhC-CCCEE
Confidence 4899999999999999999999999999999999999999999999998743 23356788899999999988 46799
Q ss_pred EEeCCHHHHHHHHHHHhHhhc------CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCC
Q 011959 159 RFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 232 (474)
+|++||+|||+.|+|+||.++ +|++||.++++|||++..++..++.......+ .+ ....+..+||||
T Consensus 96 ~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~d 168 (397)
T TIGR03246 96 FFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGF--AP-----LPGGIKHAPYND 168 (397)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCC--CC-----CCCceEEeCCCC
Confidence 999999999999999999885 78999999999999999888877653222111 01 112467889999
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceee
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t 311 (474)
++++++++. +++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+++.+++|+.||++|
T Consensus 169 ~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t 245 (397)
T TIGR03246 169 LAAAKALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILT 245 (397)
T ss_pred HHHHHHHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEE
Confidence 999999986 369999999999999999999999999999999999999999999999 9999888899999999999
Q ss_pred hhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 312 ~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
+||++++|+|+||+++++++++.+. ...+.+||++||+++++++++|+.++++++.+++++++++++++|+++..++
T Consensus 246 ~~K~lggG~pigav~~~~~i~~~~~---~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~ 322 (397)
T TIGR03246 246 SAKALGGGFPIGAMLTTTEIAAHLK---VGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARY 322 (397)
T ss_pred eehhhhCCcceeEEEEcHHHHHhcc---CCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999886 3446789999999999999999998878899999999999999999987778
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHH
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~ 469 (474)
+++.++++.|.++++++.+.. ......+++.|+++|+++.+.+.+.+|+ ++.+|+++|++++++|++
T Consensus 323 ~~~~~vrg~G~~~~i~~~~~~-----------~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~ 391 (397)
T TIGR03246 323 NVFSEIRGKGLLIGAVLTEAY-----------QGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFER 391 (397)
T ss_pred CCeEeeecCceEEEEEEcCch-----------hhHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 888899999999999985320 1234678899999999998876666776 799999999999999999
Q ss_pred HHhh
Q 011959 470 VLRQ 473 (474)
Q Consensus 470 ~~~~ 473 (474)
++.+
T Consensus 392 ~l~~ 395 (397)
T TIGR03246 392 AIEQ 395 (397)
T ss_pred HHHH
Confidence 9875
No 51
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=3.1e-63 Score=500.44 Aligned_cols=383 Identities=25% Similarity=0.348 Sum_probs=320.5
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCCC--C
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVPS--I 155 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~la~~l~~~~~~--~ 155 (474)
+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++.... .+++...+|+++|++..|+ .
T Consensus 15 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 94 (420)
T TIGR00700 15 LPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGP 94 (420)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCC
Confidence 4899999999999999999999999999999999999999999999999864322 4567789999999999973 4
Q ss_pred CeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCC-CccCCC-CCCCCCCCCCCCceE-------
Q 011959 156 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGL-PDSPGVPKGATYETL------- 226 (474)
Q Consensus 156 ~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~~-~~~~g~~~~~~~~~~------- 226 (474)
++++|++||+||++.|+|+||.+++|.+||.++++|||++.+++..++.. .....+ |..+++......+.+
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK 174 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 79999999999999999999999999999999999999999999877642 111111 111111100000000
Q ss_pred EccCC-CHHHHHHHHh--cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccc
Q 011959 227 TAPFN-DVSALENLFE--NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 302 (474)
Q Consensus 227 ~~~~~-d~~~le~~l~--~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~ 302 (474)
..+++ +++.+++++. .+++++++||+||+++++|.++++++|+++|+++|++||++||+||||+|| |+|.++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~ 254 (420)
T TIGR00700 175 QLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEH 254 (420)
T ss_pred chhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhh
Confidence 11122 2667887774 356789999999999999999999999999999999999999999999999 9998888899
Q ss_pred cCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 011959 303 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 382 (474)
Q Consensus 303 ~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 382 (474)
+++.||++||||++++|||+||+++++++++.+. ...+.+|+++||++|++++++|+.++++++.+++++.++++++
T Consensus 255 ~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~---~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~ 331 (420)
T TIGR00700 255 EGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPA---PGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTD 331 (420)
T ss_pred cCCCCCEEEeeccccCCcceEEEEecHHHHhhcC---CCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999886 3457789999999999999999999888999999999999999
Q ss_pred HHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--CcceEE--ecCCcHH
Q 011959 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSD 458 (474)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~~--~~~~t~e 458 (474)
+|+++..+++.+.++++.|+|+++++.+.. ...++......+.+.|+++||++.|++ .+.+++ +++++++
T Consensus 332 ~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~------~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~ 405 (420)
T TIGR00700 332 RLTTLKAVDPRIGDVRGLGAMIAVELVDPG------TTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDE 405 (420)
T ss_pred HHHHHHhhCCCEEEeeccceEEEEEEecCC------CCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHH
Confidence 999988888888899999999999996421 112344556788889999999999864 245565 4578999
Q ss_pred HHHHHHHHHHHHHh
Q 011959 459 DIQHTITAAEKVLR 472 (474)
Q Consensus 459 ~i~~~l~~l~~~~~ 472 (474)
+|++++++|+++++
T Consensus 406 ~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 406 LLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999875
No 52
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=3.1e-63 Score=500.45 Aligned_cols=384 Identities=25% Similarity=0.332 Sum_probs=317.7
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCC-CCC
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIE 156 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~la~~l~~~~~-~~~ 156 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|+++.. .++..++...+|+++|++.+| +.+
T Consensus 28 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 107 (442)
T PRK13360 28 APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLN 107 (442)
T ss_pred CCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCC
Confidence 4889999999999999999999999999999999999999999999998742 234568888999999999997 578
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhc------CCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCC-ceEEc
Q 011959 157 MVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATY-ETLTA 228 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~-~~~~~ 228 (474)
+|+|+|||+||++.|+|+||.++ +|.+||.+.++|||++.++++.++.......+ +..+++...... .....
T Consensus 108 ~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~ 187 (442)
T PRK13360 108 HVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARN 187 (442)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhcc
Confidence 99999999999999999999885 57899999999999999999888754322111 111111000000 00111
Q ss_pred cCC---------CHHHHHHHHhcC-CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC
Q 011959 229 PFN---------DVSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (474)
Q Consensus 229 ~~~---------d~~~le~~l~~~-~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (474)
++. ++++||++++.+ ++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+
T Consensus 188 ~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~ 267 (442)
T PRK13360 188 AFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAP 267 (442)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc
Confidence 111 256788888643 4689999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCCC----CcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 298 GAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG----PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 298 ~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~----~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
++++++|+.||++||||++++| +|+|++++++++++.+.... ..++.+||++||++|++++++|++++++++.++
T Consensus 268 ~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~ 347 (442)
T PRK13360 268 FAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTR 347 (442)
T ss_pred hhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999988 79999999999999875321 235778999999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE-
Q 011959 373 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 451 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~- 451 (474)
++++++++++.|+++. +++.+.++++.|++.++++..... .+......+.+.|+++||++.+.+ ..+++
T Consensus 348 ~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~~~~l~~~~~--------~~~~~~~~~~~~l~~~Gvl~~~~~-~~lr~~ 417 (442)
T PRK13360 348 AARLAPYWEDALHSLR-DAPHVIDIRNLGLVGAVELAPRDG--------KPGKRAYEVFLKCFEKGLMIRYTG-DILALS 417 (442)
T ss_pred HHHHHHHHHHHHHHhh-cCCCeeeeeccceEEEEEEecCCC--------CcchhHHHHHHHHHHCCcEEEecC-CEEEEe
Confidence 9999999999999874 477788999999999999964211 112234567888999999998765 34555
Q ss_pred -ecCCcHHHHHHHHHHHHHHHhhC
Q 011959 452 -SLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 452 -~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
++.+|++|||+++++|+++++++
T Consensus 418 Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 418 PPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999998764
No 53
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3e-63 Score=498.23 Aligned_cols=368 Identities=25% Similarity=0.351 Sum_probs=313.7
Q ss_pred eEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCCeE
Q 011959 83 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIEMV 158 (474)
Q Consensus 83 ~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~la~~l~~~~~-~~~~v 158 (474)
+++++++|+|+||.|||+||||.+++|+.++||+||+|.+|+++|+++... + ++.++...+|+++|++..| +.++|
T Consensus 28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v 107 (429)
T PRK06173 28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKI 107 (429)
T ss_pred ceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEE
Confidence 468999999999999999999999999999999999999999999998542 2 3578889999999999998 57899
Q ss_pred EEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCC-ccCCC-CCCCCCCCCCCCceEEccC
Q 011959 159 RFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAPF 230 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~-~~~~g~~~~~~~~~~~~~~ 230 (474)
+|++||+||++.|+|+||.+ ++|.+||.+.++|||.+.++++.++... ....+ +..+. +..+|+
T Consensus 108 ~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~--------~~~~~~ 179 (429)
T PRK06173 108 FFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPV--------QYFLPQ 179 (429)
T ss_pred EEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCC--------CeEeCC
Confidence 99999999999999999988 4688999999999999988887765311 11111 11111 111111
Q ss_pred -----------CCHHHHHHHHhcCCCCeEEEEEccc-cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC
Q 011959 231 -----------NDVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (474)
Q Consensus 231 -----------~d~~~le~~l~~~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (474)
++++.|++.++++++++++||+||+ ++++|.+.|+++|+++|+++|++||++||+||||+|| |+|.+
T Consensus 180 p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~ 259 (429)
T PRK06173 180 PSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKL 259 (429)
T ss_pred CCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcc
Confidence 1477788888766678999999997 9999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCC--CCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHH
Q 011959 298 GAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 374 (474)
Q Consensus 298 ~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~--~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 374 (474)
|+++++|+.||++||||+++|| +|++++++++++++.+... ....+++||++||++|++++++|+++++++++++++
T Consensus 260 ~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~ 339 (429)
T PRK06173 260 FALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQ 339 (429)
T ss_pred hHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999 5999999999999988531 124577899999999999999999998888999999
Q ss_pred HHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--e
Q 011959 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--S 452 (474)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~ 452 (474)
+++++|++.|+++ .+++.+.++++.|+|+++++.+.. ....+.+.|+++||++.+.+ +.+++ +
T Consensus 340 ~~g~~l~~~L~~~-~~~~~v~~vRg~Gl~~~iel~~~~-------------~~~~i~~~l~e~Gi~v~~~g-~~l~~~Pp 404 (429)
T PRK06173 340 RIEAQLKQELAPA-AEFDSVAEVRVLGAIGVVEMKEPV-------------NMATLQPRFVEHGIWVRPFG-KLVYIMPP 404 (429)
T ss_pred HHHHHHHHHHHHh-hcCCCeeeeeccceEEEEEeCCcc-------------cHHHHHHHHHHCCeEEEecC-CEEEEeCC
Confidence 9999999999976 456777889999999999995421 12568889999999998875 45544 7
Q ss_pred cCCcHHHHHHHHHHHHHHHhh
Q 011959 453 LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 453 ~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+++|++|+++++++|++++++
T Consensus 405 l~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 405 FIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred ccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999875
No 54
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=6.7e-63 Score=495.42 Aligned_cols=393 Identities=20% Similarity=0.214 Sum_probs=313.8
Q ss_pred CCchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHH
Q 011959 48 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 127 (474)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~ 127 (474)
...+++++++++++++++. +.+ .+|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|
T Consensus 17 ~~~~~s~~l~~~~~~~~~~------~~~----~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q 86 (464)
T TIGR00699 17 IPGPKSKAAMKQLNEVFDA------RAV----HFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSP 86 (464)
T ss_pred CCCccHHHHHHHHHhhhcc------cCc----ccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHH
Confidence 4467788999998877522 111 248999999999999999999999999999999999999999999985
Q ss_pred -HH-hcC-CCCCCCHHHHHHHHHHHh----hCC-CCCeEEEeCCHHHHHHHHHHHhHhhcC-------------------
Q 011959 128 -MK-KGT-SFGAPCLLENVLAEMVIS----AVP-SIEMVRFVNSGTEACMGVLRLARAFTG------------------- 180 (474)
Q Consensus 128 -~~-~~~-~~~~~~~~~~~la~~l~~----~~~-~~~~v~~~~sGseA~~~al~~ar~~~~------------------- 180 (474)
+. ... ...+.+....+|+++|.+ ..| +.++|+|+|||+||++.|||+||.+++
T Consensus 87 ~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~ 166 (464)
T TIGR00699 87 EMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCM 166 (464)
T ss_pred HHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccc
Confidence 33 322 223566677888888754 676 578999999999999999999987732
Q ss_pred --------CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCc-----------eEEccCCCHHHHHHHHh
Q 011959 181 --------RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYE-----------TLTAPFNDVSALENLFE 241 (474)
Q Consensus 181 --------~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~~d~~~le~~l~ 241 (474)
+.+||.++++|||++.++++.++........+....+....... ......++++.++++++
T Consensus 167 ~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~ 246 (464)
T TIGR00699 167 DNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIK 246 (464)
T ss_pred cccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHH
Confidence 23899999999999999999887532111011001110000000 00111235778889998
Q ss_pred cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCC--CceeehhhhcC-
Q 011959 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT--PDLTTLGKIIG- 317 (474)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~--pdi~t~sK~l~- 317 (474)
++++++++||+||+++++|.+.|+++||++|+++|++||++||+|||++|| |+|.+|+++++|+. ||++|+||+++
T Consensus 247 ~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~ 326 (464)
T TIGR00699 247 KWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQT 326 (464)
T ss_pred hcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhcc
Confidence 766789999999999999999999999999999999999999999999999 99999999999997 99999999996
Q ss_pred CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-CeeE
Q 011959 318 GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAIC 396 (474)
Q Consensus 318 ~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~ 396 (474)
+|+. +++ +. +.......+++||++||++|++++++|+.++++++.+++++++++|+++|+++..+++ .+.+
T Consensus 327 gG~~----~~~-~~---~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~ 398 (464)
T TIGR00699 327 AGYF----FHD-PA---FRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQN 398 (464)
T ss_pred CCcc----ccc-hh---ccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceee
Confidence 6753 233 22 2222245688999999999999999999999999999999999999999999988888 7889
Q ss_pred Ee--eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHH
Q 011959 397 GG--YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 397 v~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~ 471 (474)
++ +.|+|+++++.+ ......+.+.|+++|+++.+.+.+.+++ ++++|++|||+++++|++++
T Consensus 399 vRg~G~Glm~gie~~~-------------~~~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 399 LRGKGRGTFIAWDTPD-------------EAKRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred ecccCeEEEEEEecCC-------------HHHHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 99 999999999832 1234678899999999998876555555 79999999999999999864
No 55
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=6.3e-63 Score=498.19 Aligned_cols=398 Identities=30% Similarity=0.509 Sum_probs=330.8
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccC-CCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc
Q 011959 53 SEEAFNVAKELMPGGVNSPVRAFKSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG 131 (474)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~ 131 (474)
|.++++++++++|+|++++.|.+.++. ..|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++
T Consensus 1 s~~l~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~ 80 (431)
T PRK06209 1 SQLLQSRLHALIPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDG 80 (431)
T ss_pred CHHHHHHHHhhCCCCCCCCccccccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhC
Confidence 468999999999999998888775443 3589999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEE-eCCCCCCchhHHHhcCCCCccCC
Q 011959 132 TSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF-EGCYHGHADPFLVKAGSGVATLG 210 (474)
Q Consensus 132 ~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~-~~~yhg~~~~~~~~~g~~~~~~~ 210 (474)
..++.+...+.+|+++|.+.+|+.++++|+|||+||++.|+|+||.+++|.+|+.+ .++|||+..+....+
T Consensus 81 ~~~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~-------- 152 (431)
T PRK06209 81 CNFTRPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTT-------- 152 (431)
T ss_pred cCCCCCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccC--------
Confidence 76666777788999999999987789999999999999999999999999999999 678887543322110
Q ss_pred CCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011959 211 LPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (474)
Q Consensus 211 ~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (474)
+...+.+.........++|||+++|+++++++++++++||+||++++ .|+++||++|+++|++||++||+||||+
T Consensus 153 -~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~t 227 (431)
T PRK06209 153 -PMSAGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMIT 227 (431)
T ss_pred -CCCCCCChhHhccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 11112111112235678899999999999876678999999999876 7789999999999999999999999999
Q ss_pred CcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHh--hcC---CCCcccccCCCCChHHHHHHHHHHHHhc
Q 011959 291 GFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM--VAP---AGPMYQAGTLSGNPLAMTAGIHTLKRLK 365 (474)
Q Consensus 291 g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~--~~~---~~~~~~~~t~~~~~~~~aaa~aal~~~~ 365 (474)
||+.+..+..+++|+.||++|+||++|+|+|+|++++++++++. +.. .+.+.+.+|+++||++|++++++|++++
T Consensus 228 G~~~~~~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~ 307 (431)
T PRK06209 228 GFRWHMRGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYR 307 (431)
T ss_pred cCCcCcchhhHHhCCCcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHh
Confidence 99323344556789999999999999999999999999999987 321 1223477899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC
Q 011959 366 EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ 445 (474)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 445 (474)
+++++++++++++++++.|+++..++++..++++.|.++.+++...... ..+.......+.+.|+++|+++.
T Consensus 308 ~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gi~~p--- 379 (431)
T PRK06209 308 DEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGN-----GQPSQAFRTLFLQETIRRGVLMP--- 379 (431)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcc-----cCCcHHHHHHHHHHHHHCCcccc---
Confidence 8899999999999999999998888898888999999888887532110 11223334578889999999873
Q ss_pred CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 446 FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 446 ~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.++++..||++||++++++|++++++
T Consensus 380 --~l~is~~ht~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 380 --SLVVSYAHGDADIERTIDAVHGALGV 405 (431)
T ss_pred --cccccccCCHHHHHHHHHHHHHHHHH
Confidence 35677899999999999999998865
No 56
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=9.9e-63 Score=497.64 Aligned_cols=377 Identities=27% Similarity=0.383 Sum_probs=324.2
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCC
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIE 156 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~la~~l~~~~~-~~~ 156 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++.. + +++++...+|+++|++.+| +.+
T Consensus 24 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 103 (423)
T PRK05964 24 PPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLD 103 (423)
T ss_pred CCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 48999999999999999999999999999999999999999999999998542 2 4578889999999999998 578
Q ss_pred eEEEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC
Q 011959 157 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 230 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~ 230 (474)
+++|++||+||++.|+|+||.+ ++|.+||.++++|||++.+++..++....... ..+.. .....+.+|+
T Consensus 104 ~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~---~~~~~--~~~~~~~~~~ 178 (423)
T PRK05964 104 HVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHAL---YTPLL--FEQVTAPFPP 178 (423)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccccc---ccCcC--CCCEEeCCCc
Confidence 9999999999999999999988 68899999999999999999988765432211 11111 1123556666
Q ss_pred CC-----HHHHHHHHhcCCCCeEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcccccc
Q 011959 231 ND-----VSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF 303 (474)
Q Consensus 231 ~d-----~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~ 303 (474)
+| +++++++++++++++++||+|| +++++|.+.++++||++|+++|++||++||+||||+|| |+|.+++++++
T Consensus 179 ~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~ 258 (423)
T PRK05964 179 DGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQA 258 (423)
T ss_pred chhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhc
Confidence 77 8889999987777899999999 69999999999999999999999999999999999999 99988888999
Q ss_pred CCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCC---CCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 011959 304 GVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 379 (474)
Q Consensus 304 g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 379 (474)
|+.||++++||++++| +|+|++++++++++.+... ....+++||++||+++++++++|+.++++++.+++++++++
T Consensus 259 ~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~ 338 (423)
T PRK05964 259 GVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAG 338 (423)
T ss_pred CCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999988 7999999999999988531 23457789999999999999999999888899999999999
Q ss_pred HHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcH
Q 011959 380 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSS 457 (474)
Q Consensus 380 l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~ 457 (474)
+++.|+++. .++.+.++++.|+|+++++.+++. ......+.+.|+++||++.+.+ +.+++ ++.+|+
T Consensus 339 l~~~l~~l~-~~~~i~~vrg~Gl~~~i~l~~~~~----------~~~~~~l~~~l~~~Gv~v~~~~-~~lR~~p~l~~t~ 406 (423)
T PRK05964 339 LAEGLEPFR-DLPGVADVRVLGAIGAVELDRPVL----------ERDGPALRAFALERGVLLRPLG-NTIYLMPPYIITA 406 (423)
T ss_pred HHHHHHhhc-cCCCeEEeecccEEEEEEeccCcc----------hhHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCH
Confidence 999999873 466677899999999999964310 1234678899999999998865 45555 578999
Q ss_pred HHHHHHHHHHHHHHhhC
Q 011959 458 DDIQHTITAAEKVLRQI 474 (474)
Q Consensus 458 e~i~~~l~~l~~~~~~~ 474 (474)
+|||+++++|+++++++
T Consensus 407 edId~~v~~l~~al~~~ 423 (423)
T PRK05964 407 EELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999999875
No 57
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=9.9e-63 Score=497.25 Aligned_cols=384 Identities=27% Similarity=0.361 Sum_probs=316.6
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCC-CCC
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIE 156 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~la~~l~~~~~-~~~ 156 (474)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++.. .+.+.++...+|+++|++.+| +.+
T Consensus 31 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~ 110 (445)
T PRK09221 31 APRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLD 110 (445)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 4789999999999999999999999999999999999999999999998742 233568888999999999997 478
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhc------CCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCc-eEEc
Q 011959 157 MVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYE-TLTA 228 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~-~~~~ 228 (474)
+|+|++||+||++.|+|+||.++ ++.+||.+.++|||.+.++++.++.......+ +..+++....... ....
T Consensus 111 ~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (445)
T PRK09221 111 HVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPEN 190 (445)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCcccccc
Confidence 99999999999999999999885 47799999999999999999887653222111 1111111000000 0000
Q ss_pred cCC---------CHHHHHHHHhcC-CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC
Q 011959 229 PFN---------DVSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (474)
Q Consensus 229 ~~~---------d~~~le~~l~~~-~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (474)
++. .+++++++++.+ ++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+
T Consensus 191 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 270 (445)
T PRK09221 191 AFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAA 270 (445)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchh
Confidence 111 146788888754 3689999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCCC----CcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 298 GAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG----PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 298 ~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~----~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
++++++|+.||++|+||++++| +|+|++++++++++.+.... ...+.+||++||++|++++++|+.++++++.++
T Consensus 271 ~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~ 350 (445)
T PRK09221 271 FAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFER 350 (445)
T ss_pred hHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHH
Confidence 9999999999999999999988 79999999999999875311 234778999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE-
Q 011959 373 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 451 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~- 451 (474)
++++++++++.|+++ .+++.+.++++.|+|.++++..... .+......+.+.|+++||++.+.+ ..+++
T Consensus 351 ~~~~g~~l~~~l~~l-~~~~~v~~vrg~Gl~~~v~~~~~~~--------~~~~~~~~~~~~~~~~Gv~~~~~~-~~lr~~ 420 (445)
T PRK09221 351 AAELAPYFEDAVHSL-KGLPHVIDIRNIGLVAGIELAPRPG--------APGARGYEAFMKCFEKGLLVRYTG-DTIALS 420 (445)
T ss_pred HHHHHHHHHHHHHhh-ccCCCEEEEecCceEEEEEEecccc--------cccchHHHHHHHHHHCCeEEeecC-CEEEEE
Confidence 999999999999987 3577788999999999999964211 011223567889999999997754 34555
Q ss_pred -ecCCcHHHHHHHHHHHHHHHhhC
Q 011959 452 -SLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 452 -~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
++++|++|||+++++|+++++++
T Consensus 421 Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 421 PPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhh
Confidence 58999999999999999998764
No 58
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.2e-62 Score=493.75 Aligned_cols=369 Identities=24% Similarity=0.379 Sum_probs=313.7
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CC--CCCCCHHHHHHHHHHHhhC--C-C
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TS--FGAPCLLENVLAEMVISAV--P-S 154 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~--~~~~~~~~~~la~~l~~~~--~-~ 154 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++|+++. .. ....++...+|+++|++.. | +
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 96 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRG 96 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccC
Confidence 489999999999999999999999999999999999999999999999863 21 2235788899999999975 3 2
Q ss_pred C-CeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC--
Q 011959 155 I-EMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-- 230 (474)
Q Consensus 155 ~-~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-- 230 (474)
. ++++| +|||+||++.|+|+||.+++|.+||.++++|||++.++++.++.......+ +.+ ...+..+|+
T Consensus 97 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~----~~~---~~~~~~~p~~~ 169 (412)
T TIGR02407 97 LDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGA----GVP---LSNVSRMPYDG 169 (412)
T ss_pred CCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCC----CCC---CCCeEECCCCC
Confidence 3 35766 499999999999999999999999999999999999999988754322111 110 113455555
Q ss_pred ------CCHHHHHHHHhcCC---CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccc
Q 011959 231 ------NDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 300 (474)
Q Consensus 231 ------~d~~~le~~l~~~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~ 300 (474)
++++.+++++.+++ +++++||+||+++++|.+.++++||++|+++|++||++||+||||+|| |+|.++++
T Consensus 170 ~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~ 249 (412)
T TIGR02407 170 YLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSF 249 (412)
T ss_pred ccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHh
Confidence 35788899887543 578999999999999999999999999999999999999999999999 99999999
Q ss_pred cccCCCCceeehhhhcCC-CcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHH-hcCCCHHHHHHHHHH
Q 011959 301 EYFGVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-LKEPGTYEYLNKITG 378 (474)
Q Consensus 301 ~~~g~~pdi~t~sK~l~~-G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~-~~~~~~~~~~~~~~~ 378 (474)
+++++.||++++||++++ |+|+|++++++++ +.+. ...+.+||++||++|+++.++|+. ++++++.+++++.++
T Consensus 250 ~~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~---~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~ 325 (412)
T TIGR02407 250 EPAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWK---PGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSE 325 (412)
T ss_pred cccCCCCCEEEechhccCCccceeEEEEchhh-hccC---CCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 999999999999999998 9999999999886 5554 345788999999999999999995 777889999999999
Q ss_pred HHHHHHHHHhhhcC-CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC--cceE--Eec
Q 011959 379 ELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSL 453 (474)
Q Consensus 379 ~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~--~~~ 453 (474)
+++++|+++..+++ .+.++++.|+|+++++.+. .....+.+.|+++||++.+.+. +.++ +++
T Consensus 326 ~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~-------------~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l 392 (412)
T TIGR02407 326 IIQERLDRIVAEYPELIKQVRGRGLMQGIECGDG-------------DLAGKIAKAAFENGLIIETSGPNDEVIKLLPPL 392 (412)
T ss_pred HHHHHHHHHHhhCCCceEeeecceeEEEEEecCh-------------HHHHHHHHHHHHCCCEEeccCCCCCEEEEECCC
Confidence 99999999888787 6789999999999999531 2346788999999999987543 3445 479
Q ss_pred CCcHHHHHHHHHHHHHHHhh
Q 011959 454 AHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 454 ~~t~e~i~~~l~~l~~~~~~ 473 (474)
++|++|+++++++|++++++
T Consensus 393 ~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 393 TIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999864
No 59
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=7.3e-63 Score=494.89 Aligned_cols=375 Identities=20% Similarity=0.292 Sum_probs=310.7
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCC
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIE 156 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~la~~l~~~~~-~~~ 156 (474)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++... + +..++...+|+++|++..| +.+
T Consensus 22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 101 (422)
T PRK05630 22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLD 101 (422)
T ss_pred CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcC
Confidence 48999999999999999999999999999999999999999999999998532 2 3467888999999999987 478
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhc------CCcEEEEEeCCCCCCchhHHHhcCCCC-ccCCC-CCCCCCCCCCCCceEEc
Q 011959 157 MVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTA 228 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~-~~~~g~~~~~~~~~~~~ 228 (474)
+++|++||+||++.|+|+||.++ +|.+||.+.++|||.+.++++.++... ....+ |..++............
T Consensus 102 ~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 181 (422)
T PRK05630 102 HVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGS 181 (422)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCC
Confidence 99999999999999999999985 578999999999999999998766321 11000 11111100000000011
Q ss_pred cCCC----HHHHHHHHhcCCCCeEEEEEccc-cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccc
Q 011959 229 PFND----VSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 302 (474)
Q Consensus 229 ~~~d----~~~le~~l~~~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~ 302 (474)
++++ .+.+++++. +++++||+||+ ++.+|.+.|+++|+++|+++|++||++||+|||++|| |+|.++++++
T Consensus 182 ~~~~~~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~ 258 (422)
T PRK05630 182 SPQEISEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLA 258 (422)
T ss_pred ChHHHHHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHh
Confidence 1222 244555554 47999999996 9999999999999999999999999999999999999 9999999999
Q ss_pred cCCCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC---CCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 011959 303 FGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITG 378 (474)
Q Consensus 303 ~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~ 378 (474)
+|+.||++||||+++||+ |+|++++++++++.+... +.+.|++||++||++|++++++|+.+++++++++++++++
T Consensus 259 ~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~ 338 (422)
T PRK05630 259 AGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEA 338 (422)
T ss_pred cCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 999999999999999995 999999999999988531 2346789999999999999999999988899999999999
Q ss_pred HHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceE--EecCCc
Q 011959 379 ELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHS 456 (474)
Q Consensus 379 ~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~--~~~~~t 456 (474)
+|++.|+++. +++.+.++|+.|+|+++++.++. ....+.+.|+++|+++.+.+ +.++ +++++|
T Consensus 339 ~l~~~L~~l~-~~~~v~~vRg~Gl~~~ie~~~~~-------------~~~~~~~~~~~~Gl~~~~~g-~~l~~~PpL~it 403 (422)
T PRK05630 339 ELIAGLSPLA-HLPGVADVRVLGAIGVVEMEQPV-------------DMEEATQAAVDHGVWLRPFG-RLVYVMPPYITT 403 (422)
T ss_pred HHHHHHHHhh-cCCCeeeeeccccEEEEEECCcc-------------cHHHHHHHHHHCCeEEEecC-CEEEEECCccCC
Confidence 9999998764 47778899999999999996421 12467889999999998765 4445 479999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011959 457 SDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 457 ~e~i~~~l~~l~~~~~~ 473 (474)
++|||+++++|+++++.
T Consensus 404 ~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 404 SEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999864
No 60
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=9.9e-63 Score=483.01 Aligned_cols=350 Identities=27% Similarity=0.383 Sum_probs=304.9
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhhCCCCCeEE
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVR 159 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~~~~~v~ 159 (474)
|+.+.+++|+|+||.|||+||||.+++++.++||+||+|++|+++|+++.... .+.++...+|++++++.. +.++++
T Consensus 7 ~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~ 85 (364)
T PRK04013 7 RLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV-NYEYVY 85 (364)
T ss_pred CccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhc-CCCEEE
Confidence 88899999999999999999999999999999999999999999999985322 357888999999999988 568999
Q ss_pred EeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHH
Q 011959 160 FVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENL 239 (474)
Q Consensus 160 ~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~ 239 (474)
|+|||+||++.|+|+||.+++|++||.++++|||++.+++..++.......+ .+. ..++..+|+||++.+++.
T Consensus 86 ~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~--~p~-----~~~~~~~~~~d~~~l~~~ 158 (364)
T PRK04013 86 MGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDF--EPL-----VPGFKHIPFNDVEAAKEA 158 (364)
T ss_pred EeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCC--CCC-----CCCcEEecCCCHHHHHHH
Confidence 9999999999999999999999999999999999999998877653322111 111 124567889999999998
Q ss_pred HhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehhhhcCCC
Q 011959 240 FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGG 319 (474)
Q Consensus 240 l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G 319 (474)
+. +++++||+||+++++|.++++++||++|+++|++||++||+|||++|||+|.+|+++++++.||++|+||++++|
T Consensus 159 i~---~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~gK~lggG 235 (364)
T PRK04013 159 IT---KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMGKGIGNG 235 (364)
T ss_pred hc---CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEecccccCC
Confidence 86 479999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 320 ~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
+|+|+++.++++ . ...+++||++||++|++++++|+.++++++.+++++. |+++. .+.+.++||
T Consensus 236 ~P~~a~~~~~~~----~---~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~--~~~v~~vRG 299 (364)
T PRK04013 236 VPVSLTLTNFDV----E---RGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIK--GERVVTTRG 299 (364)
T ss_pred ceeEEEEecccc----c---CCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhc--cCcceeeee
Confidence 999999998775 2 2357889999999999999999999999999888764 23332 266889999
Q ss_pred eceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.|+|++++|..+ ...+.+.|+++|+++.+.+.+.+++ ++++|++++++++++|++++++
T Consensus 300 ~Gl~~gve~~~~---------------~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 300 RGLMIGIVLKKP---------------VGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred CcEEEEEEeCCc---------------HHHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 999999999531 2467889999999998876555554 7999999999999999999875
No 61
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=2.5e-62 Score=487.06 Aligned_cols=362 Identities=25% Similarity=0.393 Sum_probs=316.7
Q ss_pred EEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeEEEeC
Q 011959 85 FDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMVRFVN 162 (474)
Q Consensus 85 ~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~~v~~~~ 162 (474)
+++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++..++ +.++...+|+++|++.. +.++|+|++
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~f~~ 79 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASS-FADRVFFCN 79 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcC-CCCeEEEeC
Confidence 468999999999999999999999999999999999999999999864332 35788899999999987 467999999
Q ss_pred CHHHHHHHHHHHhHhhcC-------------CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEcc
Q 011959 163 SGTEACMGVLRLARAFTG-------------RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 229 (474)
Q Consensus 163 sGseA~~~al~~ar~~~~-------------~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~ 229 (474)
||+||++.|+|+||.+++ +.+||.++++|||++.+++..++...... +..+.. ..+..+|
T Consensus 80 sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~--~~~~~~-----~~~~~~~ 152 (382)
T PLN00144 80 SGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRT--PFEPLM-----PGVTFVE 152 (382)
T ss_pred CcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccc--cCCCCC-----CCeEEeC
Confidence 999999999999999875 47899999999999999998877543221 111222 2367789
Q ss_pred CCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCc
Q 011959 230 FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308 (474)
Q Consensus 230 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pd 308 (474)
+||++.|++.+.. +++++||+||+++++|.+.++.+|+++|+++|++||++||+||||+|| |+|.+++++++++.||
T Consensus 153 ~~d~~~l~~~~~~--~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD 230 (382)
T PLN00144 153 YGNLEAARKLIQK--GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD 230 (382)
T ss_pred CCCHHHHHHhcCC--CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC
Confidence 9999999998863 479999999999999999999999999999999999999999999999 9998888888999999
Q ss_pred eeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Q 011959 309 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 388 (474)
Q Consensus 309 i~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~ 388 (474)
++||||++++|+|+|++++++++++.+.. ..+.+||++||++|+++.++|+.++++++.++++++++++++.|+++.
T Consensus 231 i~t~sK~l~~G~pig~v~~~~~~~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~ 307 (382)
T PLN00144 231 IMTLAKPLAGGLPIGAVLVTEKVASAINP---GDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKL 307 (382)
T ss_pred EEEecccccCCcceEEEEEcHHHHhccCC---CCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998863 347789999999999999999999889999999999999999999988
Q ss_pred hhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-cceEE--ecCCcHHHHHHHHH
Q 011959 389 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFT--SLAHSSDDIQHTIT 465 (474)
Q Consensus 389 ~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~~~~--~~~~t~e~i~~~l~ 465 (474)
.+++.+.++++.|+|+|++|... ...+.+.++++||++.+.+. +.+++ ++++++++++++++
T Consensus 308 ~~~~~~~~vrg~G~~~~l~l~~~---------------~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~ 372 (382)
T PLN00144 308 GGNPHVKEVRGVGLLVGIQLDVP---------------AGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVE 372 (382)
T ss_pred hhCCCceeeecCceEEEEEecCc---------------cHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHH
Confidence 88888889999999999999311 14688899999999998753 45555 67799999999999
Q ss_pred HHHHHHhhC
Q 011959 466 AAEKVLRQI 474 (474)
Q Consensus 466 ~l~~~~~~~ 474 (474)
+|++++.++
T Consensus 373 ~l~~~l~~~ 381 (382)
T PLN00144 373 ILADCLPAL 381 (382)
T ss_pred HHHHHHHhc
Confidence 999998763
No 62
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=3.8e-62 Score=534.53 Aligned_cols=407 Identities=23% Similarity=0.291 Sum_probs=334.8
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHh
Q 011959 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (474)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 130 (474)
+++.+++++.+++++.+.... + ..|+++++++|+|+||.|||+||||.+++ .++||+||+|++|+.+|+.+
T Consensus 544 ~~~~~l~~~~~~~~~~~~~~~---~----~~p~~i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~ 614 (972)
T PRK06149 544 PDAAALLARRDASFARVQKHY---Y----ADPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSL 614 (972)
T ss_pred CCHHHHHHHHHHhhccchhhc---c----cCCCeEEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHh
Confidence 467789999888887665322 1 14789999999999999999999999986 58999999999999999988
Q ss_pred cCCCC-CCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCcc
Q 011959 131 GTSFG-APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT 208 (474)
Q Consensus 131 ~~~~~-~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~ 208 (474)
+...+ +..+...+|+++|++.+| +.++++|+|||+|||+.|||+||+++++.+||.++++|||++.+++..++.....
T Consensus 615 l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~ 694 (972)
T PRK06149 615 LNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADN 694 (972)
T ss_pred ccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCcccc
Confidence 54332 467788999999999998 5789999999999999999999999999999999999999999887765431100
Q ss_pred CCC--CCCCCCCCCCCCceEEccCC--C-----HHHHHHHHh---cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHH
Q 011959 209 LGL--PDSPGVPKGATYETLTAPFN--D-----VSALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (474)
Q Consensus 209 ~~~--~~~~g~~~~~~~~~~~~~~~--d-----~~~le~~l~---~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (474)
... +...++......+.+..+|+ + .+++++.++ ++++++++||+||+++++|.+.++++||++|+++|
T Consensus 695 ~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc 774 (972)
T PRK06149 695 PQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAV 774 (972)
T ss_pred ccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHH
Confidence 000 11111111112233343442 2 344444443 34568999999999999999999999999999999
Q ss_pred HHhCCEEEEeccccCc-ccCC-CccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHH
Q 011959 277 KENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAM 354 (474)
Q Consensus 277 ~~~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~ 354 (474)
++||+++|+||||||| |+|. +++++++|+.|||+|+||++|+|+|+|++++++++++.+... ..+++|+++||++|
T Consensus 775 ~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~--~~~~sT~~gnP~~~ 852 (972)
T PRK06149 775 RARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAE--GYFFSSTGGSPVSC 852 (972)
T ss_pred HHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHhhhccC--CcccCCCCCCHHHH
Confidence 9999999999999999 9997 668999999999999999999999999999999999988642 23457889999999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHH
Q 011959 355 TAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 434 (474)
Q Consensus 355 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 434 (474)
++++++|++++++++.+++++++++|+++|+++..+++++.+++|.|+|++++|..+.. ...++......+.+.|
T Consensus 853 aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~-----~~~~~~~~~~~i~~~l 927 (972)
T PRK06149 853 RIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQ-----TLEPATEETAAICDRL 927 (972)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcc-----cCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999988899999999999999999964321 1123445567899999
Q ss_pred HHCCeEecccCC--cceE--EecCCcHHHHHHHHHHHHHHHhh
Q 011959 435 LEEGVYFAPSQF--EAGF--TSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 435 ~~~Gv~v~~~~~--~~~~--~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+++||++.+.+. +.++ +++++|++++|+++++|++++++
T Consensus 928 ~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 928 LELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred HhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 999999998764 3455 47899999999999999999875
No 63
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=1.2e-61 Score=487.64 Aligned_cols=368 Identities=26% Similarity=0.361 Sum_probs=320.1
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++++++|+|+||.|||+||||.+++++++|||+||+|++|+.+|+++.. ..++.++...+|+++|++.. +.+++
T Consensus 21 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v 99 (406)
T PRK12381 21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDAT-FADRV 99 (406)
T ss_pred CCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhC-CCCeE
Confidence 4789999999999999999999999999999999999999999999998743 22345777899999999987 46899
Q ss_pred EEeCCHHHHHHHHHHHhHhhc------CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCC
Q 011959 159 RFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 232 (474)
+|++||+||++.|+|+||.++ ++.+|+.++++|||++..++..++.......+ ..+ ...+..+||||
T Consensus 100 ~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~d 172 (406)
T PRK12381 100 FFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDF---APL----PPDIRHAAYND 172 (406)
T ss_pred EEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCC---CCC----CCCeeEeCCCC
Confidence 999999999999999999885 78899999999999999888887753322111 111 12357789999
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceee
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t 311 (474)
++++++.+. +++++||+||+++++|.+.++++|+++|+++|++||++||+||||+|| |+|.+++++++++.||++|
T Consensus 173 ~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t 249 (406)
T PRK12381 173 LNSASALID---DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLT 249 (406)
T ss_pred HHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEE
Confidence 999999886 379999999999999999999999999999999999999999999999 9998888888999999999
Q ss_pred hhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 312 ~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
|||++++|+|+|++++++++++.+. ...+.+||++||++++++.++|+.+++++++++++++++++++.|+++..++
T Consensus 250 ~sK~l~gG~~ig~~~~~~~~~~~~~---~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~ 326 (406)
T PRK12381 250 TAKALGGGFPIGAMLTTEKCASVMT---VGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARY 326 (406)
T ss_pred ehhhhhCCCceEEEEEcHHHHhhcC---CCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999886 3456789999999999999999999888899999999999999999987777
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHH
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~ 469 (474)
+.+.++++.|+|+++++.++. ......+.+.|+++||++.+.+.+.+|+ ++.+|+++|++++++|++
T Consensus 327 ~~~~~vrg~Gl~~~~~l~~~~-----------~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~ 395 (406)
T PRK12381 327 GLFSEIRGLGLLIGCVLNAEY-----------AGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFAR 395 (406)
T ss_pred CCEEEEecCeEEEEEEecCch-----------hhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 878899999999999985320 1234678899999999998766566766 577999999999999999
Q ss_pred HHhh
Q 011959 470 VLRQ 473 (474)
Q Consensus 470 ~~~~ 473 (474)
++++
T Consensus 396 ~l~~ 399 (406)
T PRK12381 396 ACER 399 (406)
T ss_pred HHHH
Confidence 8865
No 64
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=8.1e-62 Score=490.13 Aligned_cols=369 Identities=25% Similarity=0.379 Sum_probs=310.4
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-C--CCCCCCHHHHHHHHHHHhhCC---C
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-T--SFGAPCLLENVLAEMVISAVP---S 154 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~--~~~~~~~~~~~la~~l~~~~~---~ 154 (474)
+|+++++|+|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++. . .....++...+|+++|++..+ +
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 100 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRG 100 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcC
Confidence 388999999999999999999999999999999999999999999999862 2 123457888999999999753 2
Q ss_pred CC-eEEEe-CCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC--
Q 011959 155 IE-MVRFV-NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-- 230 (474)
Q Consensus 155 ~~-~v~~~-~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-- 230 (474)
.+ +++|+ |||+||++.|+|+||.+++|.+||.++++|||++.++++.++........ +.+ ..++..+|+
T Consensus 101 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~----~~~---~~~~~~~p~~~ 173 (425)
T PRK09264 101 LDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGA----GVP---LNNVTRMPYDG 173 (425)
T ss_pred CCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCC----CCC---CCCeEEeCCCC
Confidence 33 67674 89999999999999999999999999999999999999988754322111 100 112444554
Q ss_pred ------CCHHHHHHHHhcCC---CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccc
Q 011959 231 ------NDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 300 (474)
Q Consensus 231 ------~d~~~le~~l~~~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~ 300 (474)
+|++++++++++++ +++++||+||+++++|++.++++||++|+++|++||++||+||||+|| |+|.++++
T Consensus 174 ~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~ 253 (425)
T PRK09264 174 YFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSF 253 (425)
T ss_pred ccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHH
Confidence 47888999987532 479999999999999999999999999999999999999999999999 99999899
Q ss_pred cccCCCCceeehhhhcCC-CcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHH-HHhcCCCHHHHHHHHHH
Q 011959 301 EYFGVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL-KRLKEPGTYEYLNKITG 378 (474)
Q Consensus 301 ~~~g~~pdi~t~sK~l~~-G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~~~~~~~ 378 (474)
+++++.||++||||++++ |+|+|++++++++. .+. ...+.+||++||+++++++++| +.++++++.++++++++
T Consensus 254 ~~~~v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~---~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~ 329 (425)
T PRK09264 254 ERAGITPDIVTLSKSISGYGLPMALVLIKPELD-VWK---PGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGE 329 (425)
T ss_pred hhcCCCCCEEEeccccCCCccceEEEEEchhhh-ccC---CCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999999999999997 99999999998873 443 3456789999999999999999 66666789999999999
Q ss_pred HHHHHHHHHhhhcCC-eeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC--cceEE--ec
Q 011959 379 ELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SL 453 (474)
Q Consensus 379 ~l~~~L~~~~~~~~~-~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~--~~ 453 (474)
+++++|+++..+++. ..++++.|+++++++.+ ......+.+.|+++||++.+.+. ..+++ ++
T Consensus 330 ~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~-------------~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l 396 (425)
T PRK09264 330 LVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD-------------GELAGKIAAEAFENGLIIETSGPEDEVVKLLPPL 396 (425)
T ss_pred HHHHHHHHHHHhCCCceecceecccEEEEEecC-------------hHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCC
Confidence 999999998777764 47899999999999853 13346788999999999987653 33444 67
Q ss_pred CCcHHHHHHHHHHHHHHHhh
Q 011959 454 AHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 454 ~~t~e~i~~~l~~l~~~~~~ 473 (474)
++|+++|++++++|++++++
T Consensus 397 ~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 397 TIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999998864
No 65
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=8.1e-62 Score=484.68 Aligned_cols=363 Identities=28% Similarity=0.440 Sum_probs=310.7
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++.+++|+|+||.|||+||||.++++++++||+||+|.+|+++|+++... ....++.+.+|+++|.+.. +.+++
T Consensus 18 ~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v 96 (395)
T PRK03715 18 PDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHS-CFDKV 96 (395)
T ss_pred CCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhcc-CCCEE
Confidence 47899999999999999999999999999999999999999999999987532 2246788999999998875 46899
Q ss_pred EEeCCHHHHHHHHHHHhHhhc-----CCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEccCCC
Q 011959 159 RFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFND 232 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~-----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~d 232 (474)
+|++||+|||+.|+++||.++ ++.+||.++++|||++..++..++.......+ |...+ +...+++|
T Consensus 97 ~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~--------~~~~~~~d 168 (395)
T PRK03715 97 FFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPG--------FPKAELND 168 (395)
T ss_pred EEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCC--------ceeeCCch
Confidence 999999999999999999873 67899999999999999999888754322111 11112 34457889
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceee
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t 311 (474)
++++++.+. +++++||+||+++++|.+.|+++|+++|+++|++||++||+||||+|| |+|.+|+++++|+.||++|
T Consensus 169 ~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t 245 (395)
T PRK03715 169 IASVEKLIT---DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMT 245 (395)
T ss_pred HHHHHHHcC---CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceee
Confidence 999999886 368999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 312 ~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
|||++++|+|+|+++++++++. +. +..+++||++||++|++++++|++++++++++++++++++|+++|+++..++
T Consensus 246 ~gK~lg~G~p~~av~~~~~i~~-~~---~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 321 (395)
T PRK03715 246 LGKGIGGGVPLAALLAKAEVAV-FE---AGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEER 321 (395)
T ss_pred ehhhhhCCcceEEEEEcccccc-cc---CCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999863 32 3357889999999999999999999889999999999999999999987777
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHC---CeEecccCCcceEE--ecCCcHHHHHHHHHH
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE---GVYFAPSQFEAGFT--SLAHSSDDIQHTITA 466 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~ 466 (474)
+ +.++++.|+|+++++.++ ....+.+.+.+. |+++.+...+.+|+ ++.+|++||++++++
T Consensus 322 ~-i~~vrG~Glm~~i~l~~~--------------~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~ 386 (395)
T PRK03715 322 G-LEGERGEGLLRALLLGKD--------------IGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAM 386 (395)
T ss_pred C-cCeEEcceeEEEEEecCc--------------hHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHH
Confidence 7 457999999999999542 012344444444 99997666566665 689999999999999
Q ss_pred HHHHHhhC
Q 011959 467 AEKVLRQI 474 (474)
Q Consensus 467 l~~~~~~~ 474 (474)
|+++++++
T Consensus 387 l~~~l~~~ 394 (395)
T PRK03715 387 LRSVLDKL 394 (395)
T ss_pred HHHHHHhh
Confidence 99998764
No 66
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=3.8e-61 Score=490.02 Aligned_cols=394 Identities=26% Similarity=0.394 Sum_probs=332.7
Q ss_pred chhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHH
Q 011959 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 129 (474)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~ 129 (474)
..+++++.+..+++...+.. ..|+++++++|+|+||.||++||||.+++++.++||+||+|++|+++|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~----------~~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~ 105 (474)
T PLN02624 36 SDSSAHLIELEEKYSAHNYH----------PIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAE 105 (474)
T ss_pred CcchHHHHHHHHHhhccccC----------CCCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHH
Confidence 33456777777776544221 24889999999999999999999999999999999999999999999999
Q ss_pred hcCCC--CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhc--------CCcEEEEEeCCCCCCchhHH
Q 011959 130 KGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT--------GRERIIKFEGCYHGHADPFL 199 (474)
Q Consensus 130 ~~~~~--~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~--------~~~~ii~~~~~yhg~~~~~~ 199 (474)
+.... .+.++...+|+++|++.+ +.++++|+|||+||++.|||+||.++ ++.+||.+.++|||++.+++
T Consensus 106 ~~~~~~~~~~~~~~~~la~~L~~~~-~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~ 184 (474)
T PLN02624 106 KLTLSSRAFYNDKFPEFAEYLTSMF-GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAI 184 (474)
T ss_pred hcCCcccccCCHHHHHHHHHHHhhc-CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHh
Confidence 85432 256788899999999988 47899999999999999999999863 34579999999999999999
Q ss_pred HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHh
Q 011959 200 VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 279 (474)
Q Consensus 200 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~ 279 (474)
+.++.......+ .+.. ..+..+||||++.++++++.+++++++||+||+++++|.+.|+++||++|+++|++|
T Consensus 185 s~~~~~~~~~~~--~~~~-----~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~ 257 (474)
T PLN02624 185 SMSCDNEATRGF--GPLL-----PGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKH 257 (474)
T ss_pred hcCCCccccccC--CCCC-----CCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 887653222111 1111 235677999999999999876678999999999999999999999999999999999
Q ss_pred CCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHH
Q 011959 280 GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAG 357 (474)
Q Consensus 280 g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa 357 (474)
|++||+||||+|| |+|.+++.+++++.||+++|||++++| +|+|++++++++++.+. +..+++||++||++++++
T Consensus 258 gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~---~~~~~~T~~g~pl~~aaa 334 (474)
T PLN02624 258 NVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIK---PGEHGSTFGGNPLASAVA 334 (474)
T ss_pred CCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhc---cCCcCCCCCCCHHHHHHH
Confidence 9999999999999 999888888899999999999999976 89999999999998876 345778999999999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHH
Q 011959 358 IHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 436 (474)
Q Consensus 358 ~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 436 (474)
.++|+.++++++.+++.+++++++++|+++..+++ .+.++++.|+|+++++..+. .+.....++++.|++
T Consensus 335 ~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~---------~~~~~a~~~~~~L~e 405 (474)
T PLN02624 335 MAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPK---------LGPVSAYDVCLKLKE 405 (474)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCC---------cChHHHHHHHHHHHh
Confidence 99999998888999999999999999999877777 46679999999999885321 012334678888999
Q ss_pred CCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 437 EGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 437 ~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+||++.|.+...+|+ ++.+|+++|++++++|+++++.
T Consensus 406 ~GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 406 RGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred CCeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 999999887666777 5799999999999999998753
No 67
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-61 Score=488.49 Aligned_cols=375 Identities=21% Similarity=0.295 Sum_probs=307.9
Q ss_pred eEEEeeccCEEEEc-CCCEEEeccCChhhccCCCCCHHHHH--HHHHHHHhcC-----CCCCCCHHHHHHHHHHHhhC-C
Q 011959 83 IVFDSVKGSHMWDI-DGNEYIDYVGSWGPAIIGHADDQVLA--ALGETMKKGT-----SFGAPCLLENVLAEMVISAV-P 153 (474)
Q Consensus 83 ~~~~~~~G~~~~d~-dG~~~iD~~~~~~~~~lG~~~p~v~~--a~~~~~~~~~-----~~~~~~~~~~~la~~l~~~~-~ 153 (474)
+++++++|+|+||. |||+||||.+++++.++||+||+|.+ |+++|+++.. ...+.++...+|+++|++.. |
T Consensus 28 ~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p 107 (443)
T PRK08297 28 LDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGD 107 (443)
T ss_pred eEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCC
Confidence 44899999999995 99999999999999999999999999 9999998632 22456788899999999987 4
Q ss_pred -CCCeEEEeCCHHHHHHHHHHHhHhhc------------CCcEEEEEeCCCCCCchhHHHhcCCCCc-cCCCCCC--CCC
Q 011959 154 -SIEMVRFVNSGTEACMGVLRLARAFT------------GRERIIKFEGCYHGHADPFLVKAGSGVA-TLGLPDS--PGV 217 (474)
Q Consensus 154 -~~~~v~~~~sGseA~~~al~~ar~~~------------~~~~ii~~~~~yhg~~~~~~~~~g~~~~-~~~~~~~--~g~ 217 (474)
+.++|+|+|||+||++.|+|+||.++ +|.+||.+.++|||+++++++.++.... ....+.. ..+
T Consensus 108 ~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK08297 108 PELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRI 187 (443)
T ss_pred CCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCcccc
Confidence 57899999999999999999998773 3578999999999999999998864221 1111111 001
Q ss_pred CCCC-C--------CceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011959 218 PKGA-T--------YETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (474)
Q Consensus 218 ~~~~-~--------~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (474)
+... . .+...+++++++++++++.++++++++||+||+++++|.+.|+++||++|+++|++||++||+|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV 267 (443)
T PRK08297 188 DNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEV 267 (443)
T ss_pred CCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 0000 0 001122334577788888877789999999999999999999999999999999999999999999
Q ss_pred ccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcC--CCCcccccCCCCChHHHHHHHHHHHHhc
Q 011959 289 MTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP--AGPMYQAGTLSGNPLAMTAGIHTLKRLK 365 (474)
Q Consensus 289 ~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~--~~~~~~~~t~~~~~~~~aaa~aal~~~~ 365 (474)
|||| |+|.+|+++++|+.||++||||+++ +|+++..+++.+.... .....+++||++||++|++++++|+.++
T Consensus 268 ~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 343 (443)
T PRK08297 268 QTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIE 343 (443)
T ss_pred hhccCccchHHHHHhcCCCCCEEEeccccc----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999999973 5666666665443211 0123578999999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhcCCee-EEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEeccc
Q 011959 366 EPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS 444 (474)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 444 (474)
++++++++++++++++++|+++..+++.+. ++++.|+|++++|.+ ......+.+.|+++||++.+.
T Consensus 344 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~-------------~~~~~~~~~~l~~~Gvl~~~~ 410 (443)
T PRK08297 344 EDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT-------------TADRDEVIRRLWEEGVLVLPC 410 (443)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC-------------HHHHHHHHHHHHHCCEEEecC
Confidence 899999999999999999999988888665 999999999999953 123467889999999999887
Q ss_pred CCcceEE--ecCCcHHHHHHHHHHHHHHHhhC
Q 011959 445 QFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 445 ~~~~~~~--~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
+...+++ ++++|+++||+++++|+++++++
T Consensus 411 ~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 411 GERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 6555555 79999999999999999998764
No 68
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=8.5e-60 Score=473.46 Aligned_cols=380 Identities=25% Similarity=0.355 Sum_probs=320.8
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHh
Q 011959 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (474)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 130 (474)
.++++++++.++++..... ..|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~----------~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~ 71 (396)
T PRK04073 2 TKSEKIIELTNHYGAHNYH----------PLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADK 71 (396)
T ss_pred chHHHHHHHHHHhcccccC----------CCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhh
Confidence 4567888877776543221 248899999999999999999999999999999999999999999999998
Q ss_pred cCCC--CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhh--------cCCcEEEEEeCCCCCCchhHHH
Q 011959 131 GTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLV 200 (474)
Q Consensus 131 ~~~~--~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~--------~~~~~ii~~~~~yhg~~~~~~~ 200 (474)
.... ...++...+|+++|++..+ .++++|++||+||++.||++||.+ +++++||.++++|||++..++.
T Consensus 72 ~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~ 150 (396)
T PRK04073 72 VTLTSRAFHSDQLGPWYEKVAKLTG-KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVS 150 (396)
T ss_pred ccccccccCCHHHHHHHHHHHhcCC-CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHh
Confidence 5322 3467788999999999874 579999999999999999999987 5788999999999999999988
Q ss_pred hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhC
Q 011959 201 KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG 280 (474)
Q Consensus 201 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g 280 (474)
.++.......+ .+. ...+..++++|++++++.+. +++++||+||++|++|.+.|+++|+++|+++|++||
T Consensus 151 ~~~~~~~~~~~--~~~-----~~~~~~~~~~d~~~l~~~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g 220 (396)
T PRK04073 151 LSSEEEYKRGF--GPM-----LPGIKKIPYGDLEALKAAIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEEN 220 (396)
T ss_pred hcCCcccccCC--CCC-----CCCceEeCCCCHHHHHHhcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 87753221111 111 12356788999999999886 368999999999999999999999999999999999
Q ss_pred CEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHH
Q 011959 281 ALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 358 (474)
Q Consensus 281 ~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~ 358 (474)
++||+||+|+|| ++|.+++.+++++.||+++|||++++| +|+|++++++++++.+. ...+..||++||+++++++
T Consensus 221 ~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~---~~~~~~t~~~~~~~~aaa~ 297 (396)
T PRK04073 221 VLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFT---PGSHGSTFGGNPLACAVSI 297 (396)
T ss_pred CEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhc---CCCCCCCCCCCHHHHHHHH
Confidence 999999999999 888877778889999999999999965 99999999999999886 3346779999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCC
Q 011959 359 HTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG 438 (474)
Q Consensus 359 aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 438 (474)
++|+.++++++.++++++++++.+.|+++. ++.+.++++.|+|+++++... ...+.+.|+++|
T Consensus 298 aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~--~~~i~~~~~~g~~~~~~~~~~---------------~~~~~~~l~~~G 360 (396)
T PRK04073 298 AALEVLEEEKLPERSLELGEYFKEQLKEID--NPMIKEVRGRGLFIGVELNEP---------------ARPYCEALKEEG 360 (396)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhhc--CCcccceecceEEEEEEecch---------------HHHHHHHHHHCC
Confidence 999998778899999999999999998862 344567889999999887421 257888899999
Q ss_pred eEecccCCcceEEe--cCCcHHHHHHHHHHHHHHH
Q 011959 439 VYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 439 v~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~~~~ 471 (474)
|++.+.+...+|++ +.+|+|++++++++|++++
T Consensus 361 v~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 361 LLCKETHETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred eEEecCCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 99987665667774 7999999999999999876
No 69
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=3.4e-59 Score=468.68 Aligned_cols=365 Identities=27% Similarity=0.402 Sum_probs=317.3
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++++++|+|+||.|||+||||.+|++++++||+||+|++|+++|++++...+ +.++...+|+++|++.. +.+++
T Consensus 13 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v 91 (389)
T PRK01278 13 ADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENS-FADKV 91 (389)
T ss_pred CCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhC-CCCEE
Confidence 4889999999999999999999999999999999999999999999998753322 45788899999999987 46799
Q ss_pred EEeCCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCC
Q 011959 159 RFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 232 (474)
+|++||+||++.|++++|.+ +++++||.++++|||++..++..++.......+. + ....+..++++|
T Consensus 92 ~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~d 164 (389)
T PRK01278 92 FFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFG--P-----LVPGFDQVPFGD 164 (389)
T ss_pred EEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCC--C-----CCCCceEeCCCC
Confidence 99999999999999999887 6678999999999999999988776533221110 0 112356678899
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceee
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t 311 (474)
++++++.++. ++++|++||+++++|.+.++++|+++|+++|++||++||+||||+|| |+|.+++.+++++.||++|
T Consensus 165 ~~~l~~~l~~---~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t 241 (389)
T PRK01278 165 IEALKAAITP---NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMA 241 (389)
T ss_pred HHHHHHhhCC---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEE
Confidence 9999999863 79999999999999988899999999999999999999999999999 8888778788899999999
Q ss_pred hhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 312 ~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
|||++++|+|+||+++++++++.+. ...+.+|+++||+++++++++|+.++++++.+++++++++++++|+++...+
T Consensus 242 ~sK~l~~G~~ig~~~~~~~~~~~~~---~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~ 318 (389)
T PRK01278 242 VAKGIGGGFPLGACLATEEAAKGMT---PGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRF 318 (389)
T ss_pred EehhccCCcceEEEEEcHHHHhccC---CCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999998886 3457789999999999999999998777889999999999999999987667
Q ss_pred C-CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEe--cCCcHHHHHHHHHHHH
Q 011959 392 G-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAE 468 (474)
Q Consensus 392 ~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~ 468 (474)
+ ++.++++.|.++++++..+ ..++++.|+++||++.|.+.+.+|++ +++++++|++++++|+
T Consensus 319 ~~~~~~v~g~G~~~~i~~~~~---------------~~~~~~~l~~~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~ 383 (389)
T PRK01278 319 PDVIEEVRGKGLLLGLKCVVP---------------NRDLVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALERLE 383 (389)
T ss_pred CCceeeEecccEEEEEEEecC---------------HHHHHHHHHHCCeEEeecCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 6 7778999999999887421 25788999999999999876777774 6799999999999999
Q ss_pred HHHhhC
Q 011959 469 KVLRQI 474 (474)
Q Consensus 469 ~~~~~~ 474 (474)
++++++
T Consensus 384 ~~l~~~ 389 (389)
T PRK01278 384 RAAESL 389 (389)
T ss_pred HHHHhC
Confidence 998764
No 70
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=2.6e-58 Score=463.76 Aligned_cols=368 Identities=28% Similarity=0.399 Sum_probs=317.0
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++.+++|+|+||.||++||||.+|+++++|||+||+|.+++.++++++...+ +.++...+|+++|++.. +.+++
T Consensus 22 ~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~ 100 (403)
T PRK05093 22 AEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT-FAERV 100 (403)
T ss_pred CCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC-CCCEE
Confidence 4889999999999999999999999999999999999999999999998743222 35667789999999987 56899
Q ss_pred EEeCCHHHHHHHHHHHhHhhc------CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCC
Q 011959 159 RFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 232 (474)
+|++||+|||+.|+++||.++ ++++||.++++|||++..++..++..... .++.. ...++..+++||
T Consensus 101 ~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~d 173 (403)
T PRK05093 101 FFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYS------DGFGP-KPADITHVPFND 173 (403)
T ss_pred EEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhh------hcCCC-CCCCcEEeCCCC
Confidence 999999999999999999885 68899999999999999887776542211 11111 122467889999
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceee
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t 311 (474)
++.+++.+. +++++||+||+++++|.+.++++|+++|+++|++||+++|+||||+|| ++|.+++.+++++.||+.+
T Consensus 174 ~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s 250 (403)
T PRK05093 174 LAAVKAVID---DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILT 250 (403)
T ss_pred HHHHHHHhc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEE
Confidence 999999886 368999999999999999999999999999999999999999999999 8887777778899999999
Q ss_pred hhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 312 ~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
|||++++|+|+||+++++++++.+. ...+..|++++|+.|+++.++|+.+.++++.++++++++++++.|+++..++
T Consensus 251 ~sK~l~~G~rig~vv~~~~i~~~l~---~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 327 (403)
T PRK05093 251 SAKALGGGFPIGAMLTTAEIASHFK---VGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKY 327 (403)
T ss_pred ecccccCCcceEEEEEcHHHHhhcC---CCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999886 3346678999999999999999998778899999999999999999987667
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHH
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~ 469 (474)
++...+++.|.++++++.... .....++++.|+++||++.+.+.+.+|+ ++.+++++|++++++|++
T Consensus 328 ~~~~~~~~~G~~~~~~l~~~~-----------~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~~ 396 (403)
T PRK05093 328 GVFSEIRGMGLLIGAELKPQY-----------KGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFEK 396 (403)
T ss_pred CCeEeEeeCceEEEEEecCcc-----------hhHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 777789999999999985310 1124678899999999999877667777 688899999999999999
Q ss_pred HHhh
Q 011959 470 VLRQ 473 (474)
Q Consensus 470 ~~~~ 473 (474)
++.+
T Consensus 397 ~l~~ 400 (403)
T PRK05093 397 AVAK 400 (403)
T ss_pred HHHH
Confidence 8865
No 71
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=6.5e-59 Score=468.99 Aligned_cols=372 Identities=21% Similarity=0.285 Sum_probs=300.4
Q ss_pred CeE--EEeeccCEEEEc-CCCEEEeccCChhhccCCCCCHHHH--HHHHHHHHhcC----C-CCCCCHHHHHHHHHHHhh
Q 011959 82 PIV--FDSVKGSHMWDI-DGNEYIDYVGSWGPAIIGHADDQVL--AALGETMKKGT----S-FGAPCLLENVLAEMVISA 151 (474)
Q Consensus 82 p~~--~~~~~G~~~~d~-dG~~~iD~~~~~~~~~lG~~~p~v~--~a~~~~~~~~~----~-~~~~~~~~~~la~~l~~~ 151 (474)
|++ +++++|+|+||. |||+||||.+++++.++||+||+|+ +|+.+|+++.. . ....++...+++++|.+.
T Consensus 18 p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 97 (431)
T TIGR03251 18 DLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARV 97 (431)
T ss_pred ceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHh
Confidence 444 699999999996 9999999999999999999999999 99999998752 1 134577778999999988
Q ss_pred C-C-CCCeEEEeCCHHHHHHHHHHHhHhhcC------------CcEEEEEeCCCCCCchhHHHhcCCCCcc-CCCCCCCC
Q 011959 152 V-P-SIEMVRFVNSGTEACMGVLRLARAFTG------------RERIIKFEGCYHGHADPFLVKAGSGVAT-LGLPDSPG 216 (474)
Q Consensus 152 ~-~-~~~~v~~~~sGseA~~~al~~ar~~~~------------~~~ii~~~~~yhg~~~~~~~~~g~~~~~-~~~~~~~g 216 (474)
. + +.++++|+|||+||++.|+|+||.+++ +.+||.++++|||++.++++.++..... ...|....
T Consensus 98 ~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~ 177 (431)
T TIGR03251 98 LGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDW 177 (431)
T ss_pred cCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCC
Confidence 6 3 578999999999999999999998863 4789999999999999999888753221 11111100
Q ss_pred --C--CCC---CC----CceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 217 --V--PKG---AT----YETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 217 --~--~~~---~~----~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
+ +.. .. .....+.+++++++++.+.++++++++||+||+++++|.+.++++||++|+++|++||++||+
T Consensus 178 ~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~ 257 (431)
T TIGR03251 178 PRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIF 257 (431)
T ss_pred ccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 0 000 00 001111234567778888777789999999999999999999999999999999999999999
Q ss_pred eccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhc--CCCCcccccCCCCChHHHHHHHHHHH
Q 011959 286 DEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVA--PAGPMYQAGTLSGNPLAMTAGIHTLK 362 (474)
Q Consensus 286 DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~--~~~~~~~~~t~~~~~~~~aaa~aal~ 362 (474)
||||+|| |+|.+|+++++|+.||++++||++ ++++++..+++.+... ......+.+||++||++|++++++|+
T Consensus 258 DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~----~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 333 (431)
T TIGR03251 258 DEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT----QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILE 333 (431)
T ss_pred ecchhccCccchHHHHHhcCCCCCEEEecccC----ccceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHH
Confidence 9999999 999999999999999999999997 4555555555433221 01123477899999999999999999
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEe
Q 011959 363 RLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYF 441 (474)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 441 (474)
.++++++.+++++++++++++|+++..+++ ++.++++.|+|+++++.. ......+.+.|+++||++
T Consensus 334 ~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~-------------~~~~~~~~~~l~~~Gvl~ 400 (431)
T TIGR03251 334 IIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS-------------TADRDEVIRQLYREGVLL 400 (431)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC-------------HHHHHHHHHHHHhCCeEE
Confidence 998888999999999999999999877888 888999999999999842 123457889999999999
Q ss_pred cccCCcceE--EecCCcHHHHHHHHHHHHHH
Q 011959 442 APSQFEAGF--TSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 442 ~~~~~~~~~--~~~~~t~e~i~~~l~~l~~~ 470 (474)
.+.+...++ +++.+|++|||+++++|+++
T Consensus 401 ~~~g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 401 LGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred ecCCCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 887655555 47999999999999999863
No 72
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=7.5e-60 Score=461.48 Aligned_cols=315 Identities=37% Similarity=0.593 Sum_probs=277.1
Q ss_pred EEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCC-CCCeEE
Q 011959 84 VFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVR 159 (474)
Q Consensus 84 ~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~la~~l~~~~~-~~~~v~ 159 (474)
++++++|+|+||.||++||||.+++++.++||+||+|.+++++++.+... ....++...+|+++|.+.+| +.++++
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~ 80 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVF 80 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceee
Confidence 58999999999999999999999999999999999999999999988643 34578889999999999998 688999
Q ss_pred EeCCHHHHHHHHHHHhH------hhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEccCCC
Q 011959 160 FVNSGTEACMGVLRLAR------AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFND 232 (474)
Q Consensus 160 ~~~sGseA~~~al~~ar------~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~d 232 (474)
|++||+||++.|||+|| ..++|.+|+.+.++|||.+.+++..++........ +. ...+..+|+++
T Consensus 81 f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~--------~~~~~~~p~~~ 152 (339)
T PF00202_consen 81 FANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPL--------YPGVVFVPFPD 152 (339)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSS--------STTEEEEETTC
T ss_pred eccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcccccccccc--------ccccccccCCc
Confidence 99999999999999999 88999999999999999999999987664333211 11 12357788887
Q ss_pred HHH----------HHHHHh-cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccc
Q 011959 233 VSA----------LENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 300 (474)
Q Consensus 233 ~~~----------le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~ 300 (474)
... +++.+. .+++++++||+||+++++|.+.++++||++|+++|+|||++||+|||+||| |+|++|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~ 232 (339)
T PF00202_consen 153 PAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFAS 232 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGH
T ss_pred cchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccce
Confidence 666 444333 335689999999999999999999999999999999999999999999999 99999999
Q ss_pred cccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 011959 301 EYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGEL 380 (474)
Q Consensus 301 ~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l 380 (474)
+++|+.||++|+||++++|+|+|++++++++++.+.. ..+.+||++||++|++++++|+.++++++.++++++++++
T Consensus 233 ~~~gv~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~---~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l 309 (339)
T PF00202_consen 233 EHYGVDPDIVTFGKGLGGGLPISAVLGSEEIMEAFQP---GSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERL 309 (339)
T ss_dssp HHHTSSSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCT---TSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred ecccccCcccccccchhhhhhcccccccchhhccccc---cccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998863 3388999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCeeEEeeeceeEEEEEe
Q 011959 381 TQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (474)
Q Consensus 381 ~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (474)
+++|+++..+++.+.++++.|+|++++|.
T Consensus 310 ~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 310 REGLRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred HHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 99999998888999999999999999985
No 73
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=1.4e-58 Score=465.62 Aligned_cols=377 Identities=23% Similarity=0.305 Sum_probs=313.4
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCCe
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIEM 157 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~la~~l~~~~~-~~~~ 157 (474)
++.+++++|+|+||.|||+||||.+++++.+|||+||+|++++++++++... + +..++...+++++|++..| +.++
T Consensus 28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~ 107 (427)
T TIGR00508 28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDC 107 (427)
T ss_pred CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCE
Confidence 4678999999999999999999999999999999999999999999998532 2 3467788999999999987 4689
Q ss_pred EEEeCCHHHHHHHHHHHhHhhc------CCcEEEEEeCCCCCCchhHHHhcCCCC-ccCCC-CCCCCCCCCCCC-ceEEc
Q 011959 158 VRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATY-ETLTA 228 (474)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~-~~~~g~~~~~~~-~~~~~ 228 (474)
++|++||+||++.|+|+||.++ ++.+||.++++|||++.++++.++... ....+ +..+........ ..+..
T Consensus 108 v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 187 (427)
T TIGR00508 108 VFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDE 187 (427)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccc
Confidence 9999999999999999999884 578999999999999999988776421 11000 111111000000 01112
Q ss_pred cC--CCHHHHHHHHhcCCCCeEEEEEccc-cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccC
Q 011959 229 PF--NDVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG 304 (474)
Q Consensus 229 ~~--~d~~~le~~l~~~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g 304 (474)
++ +|+++++++++++++++++||+||+ ++++|.+.++++||++|+++|++||++||+||||+|| |+|.+|+.++++
T Consensus 188 ~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~ 267 (427)
T TIGR00508 188 EWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAG 267 (427)
T ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcC
Confidence 22 3678889888876678999999997 8999999999999999999999999999999999999 999999999999
Q ss_pred CCCceeehhhhcCCCc-ceEEEEecHHHHHhhcCC--CCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 011959 305 VTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 381 (474)
Q Consensus 305 ~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~--~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 381 (474)
+.||++|+||+++||+ |++++++++++++.+... ....+.+||++||+++++++++|++++++++.+++++++++|+
T Consensus 268 v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 347 (427)
T TIGR00508 268 VVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLK 347 (427)
T ss_pred CCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999995 999999999999988642 1234778999999999999999999988899999999999999
Q ss_pred HHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHH
Q 011959 382 QGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDD 459 (474)
Q Consensus 382 ~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~ 459 (474)
++|+++. .++...++++.|+|+++++.++. ....+.+.|+++||++.+.+ ..+++ ++++|++|
T Consensus 348 ~~L~~l~-~~~~i~~vrg~G~~~~i~~~~~~-------------~~~~~~~~l~~~Gv~~~~~~-~~l~~~ppl~~t~~~ 412 (427)
T TIGR00508 348 RELSPLR-KNPVVKDVRVLGAIGVVEMYKPV-------------NVEELQKKFVEQGVWIRPFG-KLIYVMPPYIITTEQ 412 (427)
T ss_pred HHHHHhh-cCCCEEeEeccccEEEEEECCcc-------------CHHHHHHHHHHCCeEEEecC-CEEEEECCCCCCHHH
Confidence 9999874 35556789999999999995321 12568899999999998765 34555 68899999
Q ss_pred HHHHHHHHHHHHhh
Q 011959 460 IQHTITAAEKVLRQ 473 (474)
Q Consensus 460 i~~~l~~l~~~~~~ 473 (474)
||+++++|++++++
T Consensus 413 id~~~~~l~~~l~~ 426 (427)
T TIGR00508 413 LQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
No 74
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=1.3e-57 Score=481.31 Aligned_cols=412 Identities=19% Similarity=0.237 Sum_probs=320.0
Q ss_pred chhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccC----EEEEcCCC----EEEeccCChhhccCC-CCCHHH
Q 011959 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGS----HMWDIDGN----EYIDYVGSWGPAIIG-HADDQV 120 (474)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~----~~~d~dG~----~~iD~~~~~~~~~lG-~~~p~v 120 (474)
..+++++.+++++++....+ +.+.+. ...+.+|++++|. |++|.+|+ +|||++++||++++| |+||+|
T Consensus 311 ~~~~~~~~~~a~~~iw~Pft-q~~~~~--~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I 387 (817)
T PLN02974 311 LQRLQSMPKEAGEVLWWPFT-QHALVP--RDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPEL 387 (817)
T ss_pred hHHHHHHHHHHhhhccCCcc-cccccC--CCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHH
Confidence 34567788888887754332 111111 1137889999998 99999998 999999999999999 589999
Q ss_pred HHHHHHHHHhcCCC---CCCCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHhH-hhc---------------
Q 011959 121 LAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLAR-AFT--------------- 179 (474)
Q Consensus 121 ~~a~~~~~~~~~~~---~~~~~~~~~la~~l~~~~~-~-~~~v~~~~sGseA~~~al~~ar-~~~--------------- 179 (474)
.+|+++|+++..++ ++.++...+|+++|.+..+ + .++|+|++|||||+|.|||+|| .++
T Consensus 388 ~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~ 467 (817)
T PLN02974 388 ARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRG 467 (817)
T ss_pred HHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCccccccccc
Confidence 99999999985432 3578899999999999654 3 6899999999999999999995 352
Q ss_pred ---CCcEEEEEeCCCCCCchhHHHhcCCCCccCCC--CCC-CCCCCCCCCc--------eEEccCC--------------
Q 011959 180 ---GRERIIKFEGCYHGHADPFLVKAGSGVATLGL--PDS-PGVPKGATYE--------TLTAPFN-------------- 231 (474)
Q Consensus 180 ---~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~--~~~-~g~~~~~~~~--------~~~~~~~-------------- 231 (474)
+|.+||.++++|||.+.+++..++.......+ |.. +......... ...+|++
T Consensus 468 ~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 547 (817)
T PLN02974 468 GDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWES 547 (817)
T ss_pred ccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccccccccccc
Confidence 37789999999999999999998743221110 100 0000000000 0001110
Q ss_pred -----------------CHHHHHHHHhc-----CCCCeEEEEEccc-cCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011959 232 -----------------DVSALENLFEN-----NKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (474)
Q Consensus 232 -----------------d~~~le~~l~~-----~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (474)
..+.+++.|++ .++++++||+||+ ++.+|++.|+++|+++|+++|++||++||+|||
T Consensus 548 ~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV 627 (817)
T PLN02974 548 RDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEV 627 (817)
T ss_pred ccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeec
Confidence 02557777753 3568999999995 899999999999999999999999999999999
Q ss_pred ccCc-ccCCCccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCC---CCcccccCCCCChHHHHHHHHHHHH
Q 011959 289 MTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKR 363 (474)
Q Consensus 289 ~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~---~~~~~~~t~~~~~~~~aaa~aal~~ 363 (474)
+||| |+|.+|+++++|+.|||+|++|+++|| +|+|++++++++++.+... ..+.|++||++||++|++++++|++
T Consensus 628 ~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~ 707 (817)
T PLN02974 628 FTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQW 707 (817)
T ss_pred ccCCCcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999999 5999999999999998521 2456899999999999999999999
Q ss_pred hcCCCHHHHHHHH----HHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCc-CcccccccchHHHHHHHHHHH-HC
Q 011959 364 LKEPGTYEYLNKI----TGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY-NFEDAKKSETTKFARFYRGML-EE 437 (474)
Q Consensus 364 ~~~~~~~~~~~~~----~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~-~~ 437 (474)
++++++.+++.++ ++++.+.|.+.+.+++.+.++++.|+|++++|.++... .+ .......+.+.++ ++
T Consensus 708 ~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~------~~~~a~~v~~~~~~~~ 781 (817)
T PLN02974 708 YKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGY------SSLYARSVVRRLRRED 781 (817)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCccccc------chHHHHHHHHHHHHhC
Confidence 9887555555444 45556666444566889999999999999999764211 11 2234567888889 99
Q ss_pred CeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHH
Q 011959 438 GVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 438 Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~ 471 (474)
||++++.+ +.+++ ++.+++++++++++++.+.+
T Consensus 782 Gl~~r~~G-nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 782 GIYARPLG-NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CEEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 99999875 44443 78999999999999999876
No 75
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=3.2e-57 Score=457.74 Aligned_cols=400 Identities=28% Similarity=0.431 Sum_probs=328.8
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC
Q 011959 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT 132 (474)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~ 132 (474)
.+++.++++++.++++..+ +|+++++++|+|+||.||++||||.+++++.++||+||+|.+++.+++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~ 74 (425)
T PRK08088 4 NKSLMQRRSAAVPRGVGQI---------HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS 74 (425)
T ss_pred HHHHHHHHHHhhccccCCC---------CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCC
Confidence 4567777777777765432 3899999999999999999999999999999999999999999999999853
Q ss_pred CCC---CCCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCC-
Q 011959 133 SFG---APCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV- 206 (474)
Q Consensus 133 ~~~---~~~~~~~~la~~l~~~~~-~-~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~- 206 (474)
... ..++...+|+++|++..| + .++++|++||+||++.|+++||.++++.+||.++++|||.+.+++..++...
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~ 154 (425)
T PRK08088 75 HTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNP 154 (425)
T ss_pred CccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCc
Confidence 221 236677899999999886 3 3699999999999999999999999999999999999999999998776411
Q ss_pred ccCCC-CCCCCCCCCCCCceEEccCCC------HHHHHHHHh--cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHH
Q 011959 207 ATLGL-PDSPGVPKGATYETLTAPFND------VSALENLFE--NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 277 (474)
Q Consensus 207 ~~~~~-~~~~g~~~~~~~~~~~~~~~d------~~~le~~l~--~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~ 277 (474)
...++ +...++.. ..+..++++ ++.|+++++ .+++++++||+||+++++|.+.++++|+++|+++|+
T Consensus 155 ~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~ 230 (425)
T PRK08088 155 YSAGMGLMPGHVYR----ALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCD 230 (425)
T ss_pred cccCCCCCCCCcEE----cCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 11111 00111100 001111221 567888886 345689999999999999999999999999999999
Q ss_pred HhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHH
Q 011959 278 ENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTA 356 (474)
Q Consensus 278 ~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aa 356 (474)
+||++||+||+|+|| ++|.+++++++++.||+.+|||++++|+|+||+++++++++.+.. ..+.+|+++||+.|++
T Consensus 231 ~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~~a 307 (425)
T PRK08088 231 EHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAP---GGLGGTYAGNPIACAA 307 (425)
T ss_pred HcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCC---CCCCCCCCcCHHHHHH
Confidence 999999999999999 888777777889999999999999999999999999999998873 3467799999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHH
Q 011959 357 GIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 436 (474)
Q Consensus 357 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 436 (474)
+.++|+.++.+++++++++.++++++.|.++..+++.+..+++.|+|+|+++.++. +...|+......+.+.|++
T Consensus 308 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~-----~~~~p~~~~~~~l~~~~~~ 382 (425)
T PRK08088 308 ALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDG-----DHSKPNAKLTAQIVARARD 382 (425)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCC-----CCCCCCHHHHHHHHHHHHh
Confidence 99999998878999999999999999999988888888889999999999996432 1122445566789999999
Q ss_pred CCeEecccCC--cceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 437 EGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 437 ~Gv~v~~~~~--~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+||++.+.+. +.+++ ++.+|+++|++++++|++++.+
T Consensus 383 ~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 383 KGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 9998876542 45565 4578999999999999999875
No 76
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=9.8e-57 Score=452.39 Aligned_cols=364 Identities=28% Similarity=0.403 Sum_probs=313.2
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCC--CC
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPS--IE 156 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~--~~ 156 (474)
.|+++++++|+|+||.|||+||||.+++++++|||+||+|.+++.+++++... ..+++....+|+++|++.++. .+
T Consensus 25 ~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~ 104 (398)
T PRK03244 25 PPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGG 104 (398)
T ss_pred CCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCC
Confidence 37899999999999999999999999999999999999999999999987422 225677778999999999862 47
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHH
Q 011959 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 236 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l 236 (474)
+++|++||+||++.|+++++. +++++||.++++|||++..++...+.......+ .....++..+|++|++++
T Consensus 105 ~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d~~~l 176 (398)
T PRK03244 105 RVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPF-------EPLPGGVEHVPYGDVDAL 176 (398)
T ss_pred EEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCC-------CCCCCCceEeCCCCHHHH
Confidence 999999999999999999877 678899999999999999988776643221111 011224677888999999
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhh
Q 011959 237 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKI 315 (474)
Q Consensus 237 e~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~ 315 (474)
++.+. +++++|++||+++++|.+.|+++|+++|+++|++||++||+||+|+|| |+|.+++++++++.||++||||+
T Consensus 177 ~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~ 253 (398)
T PRK03244 177 AAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKG 253 (398)
T ss_pred HHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchh
Confidence 99885 378999999999999999999999999999999999999999999999 98887777888999999999999
Q ss_pred cCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCee
Q 011959 316 IGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI 395 (474)
Q Consensus 316 l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 395 (474)
+++|+|+|++++++++++.+. ...+.+||++||++|+++.++|+.++++++.++++++++++++.|+++ .++.+.
T Consensus 254 l~~G~~ig~~~~~~~~~~~~~---~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~ 328 (398)
T PRK03244 254 LGGGLPIGACLAFGPAADLLT---PGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL--GHPLVD 328 (398)
T ss_pred hhCCcccEEEEEcHHHHhhcc---CCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc--CCCcee
Confidence 999999999999999999886 344677999999999999999998888889999999999999999876 356667
Q ss_pred EEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 396 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 396 ~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
++++.|+++++++..+ ....+.+.|+++||++.+.+.+.+|+ ++.+|++||++++++|++++++
T Consensus 329 ~v~g~g~~~~i~~~~~--------------~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 329 HVRGRGLLLGIVLTAP--------------VAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred eEeeccEEEEEEEecc--------------HHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 8899999999998421 23578899999999998876566666 4779999999999999999875
Q ss_pred C
Q 011959 474 I 474 (474)
Q Consensus 474 ~ 474 (474)
+
T Consensus 395 ~ 395 (398)
T PRK03244 395 A 395 (398)
T ss_pred c
Confidence 3
No 77
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-56 Score=448.24 Aligned_cols=362 Identities=29% Similarity=0.410 Sum_probs=312.7
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~~~v 158 (474)
+|+++++++|+|+||.||++||||.+|+++.+|||+||+|++|+.+++++... ....++++.+|++++.+..+ .+++
T Consensus 11 ~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~ 89 (377)
T PRK02936 11 FPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSA-GDLV 89 (377)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCC-CCEE
Confidence 47899999999999999999999999999999999999999999999987422 22457888999999998774 5799
Q ss_pred EEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHH
Q 011959 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~ 238 (474)
+|++||++|++.|++++|.++++++||.++++|||++...+..++.......+ . ....++..+|+||++++++
T Consensus 90 ~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~d~~~l~~ 162 (377)
T PRK02936 90 FFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGF------G-PLLPGFTHVPFNDIKALKE 162 (377)
T ss_pred EEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccC------C-CCCCCceEeCCCCHHHHHH
Confidence 99999999999999999999999999999999999999888776542221111 0 0112356789999999999
Q ss_pred HHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcC
Q 011959 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG 317 (474)
Q Consensus 239 ~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~ 317 (474)
.+. +++++|++||+++++|.++++++|+++|+++|++||++||+||+|+|| ++|.++..+++++.||++||||+++
T Consensus 163 ~~~---~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~ 239 (377)
T PRK02936 163 VMN---EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLG 239 (377)
T ss_pred hcc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEccccc
Confidence 886 368999999999999999999999999999999999999999999999 8887777778899999999999999
Q ss_pred CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEE
Q 011959 318 GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (474)
Q Consensus 318 ~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (474)
+|+|+||+++++++++.+. ...+.+|+++||++++++.++|+.+.+++++++++++++++++.|++...+++.+..+
T Consensus 240 ~G~~ig~v~~~~~~~~~~~---~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 316 (377)
T PRK02936 240 NGIPVGAMIGKKELGTAFG---PGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNI 316 (377)
T ss_pred CCCccEEEEEcHHHHhhcc---CCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE
Confidence 9999999999999999886 3346678999999999999999998667899999999999999999876667777778
Q ss_pred eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEe--cCCcHHHHHHHHHHHHHHH
Q 011959 398 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 398 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~~~~ 471 (474)
++.|.++++++.++ ...+.+.|.++||++.+.+.+.+|++ +.++++++++++++|++++
T Consensus 317 ~~~g~~~~i~~~~~---------------~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 317 RGKGLMIGIECTEE---------------VAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred eecceEEEEEecch---------------HHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 88999999988531 35688899999999998876777875 7899999999999998764
No 78
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=1.8e-55 Score=443.10 Aligned_cols=386 Identities=23% Similarity=0.350 Sum_probs=321.1
Q ss_pred HHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC
Q 011959 54 EEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS 133 (474)
Q Consensus 54 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~ 133 (474)
++++++.+++...+.. ..|+++.+++|+|+||.||++||||.+++++.++||+||+|++|+.+++++...
T Consensus 2 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~ 71 (401)
T TIGR01885 2 EEAIERENKYGAHNYH----------PLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTL 71 (401)
T ss_pred hhHHHHHHHhhhcccC----------CCCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccc
Confidence 4566666665443321 237889999999999999999999999999999999999999999999987432
Q ss_pred CC--CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhh--------cCCcEEEEEeCCCCCCchhHHHhcC
Q 011959 134 FG--APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVKAG 203 (474)
Q Consensus 134 ~~--~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~--------~~~~~ii~~~~~yhg~~~~~~~~~g 203 (474)
.. ..++...+|+++|++.+ +.++++|++||++||+.|+++||.+ +++..|+.++++|||++...+..++
T Consensus 72 ~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~ 150 (401)
T TIGR01885 72 SSRAFYNDVFGEFAEYVTKLF-GYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMST 150 (401)
T ss_pred cccccCCHHHHHHHHHHHhhc-CCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcC
Confidence 22 35778899999999988 4689999999999999999999876 3578899999999999999888776
Q ss_pred CCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEE
Q 011959 204 SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL 283 (474)
Q Consensus 204 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~ll 283 (474)
.......+ .. ....+..++|+|+++|+++++++++++++||+||+++++|.+.|+++||++|+++|++||+++
T Consensus 151 ~~~~~~~~---~~----~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~ll 223 (401)
T TIGR01885 151 DPDSRTNF---GP----YVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLL 223 (401)
T ss_pred Cccccccc---CC----CCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 42221111 00 012357789999999999997666789999999999999999999999999999999999999
Q ss_pred EEeccccCc-ccCCCccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHH
Q 011959 284 IFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 361 (474)
Q Consensus 284 I~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal 361 (474)
|+||||+|| ++|.+++.+++++.||++++||++++| +|+|++++++++++.+.. ..+..|+++||++++++.++|
T Consensus 224 i~DEv~~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~---~~~~~t~~~~p~~~~aa~a~L 300 (401)
T TIGR01885 224 IADEIQTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKP---GEHGSTYGGNPLACAVAVAAL 300 (401)
T ss_pred EEechhhCCCccchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccC---CCCCCCCCCCHHHHHHHHHHH
Confidence 999999999 988877777889999999999999976 899999999999998863 335578999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEe
Q 011959 362 KRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYF 441 (474)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 441 (474)
+.++++++.++++++++++++.|+++. .+++.++++.|.|+.+++..+.. .....++.+.|.++||++
T Consensus 301 ~~i~~~~l~~~~~~~~~~~~~~L~~l~--~~~~~~~~g~g~~~~i~~~~~~~----------~~~~~~l~~~l~~~Gv~v 368 (401)
T TIGR01885 301 EVLEEEKLAENAEKLGEIFRDQLKKLP--KPIITEVRGRGLLNAIVIDESKT----------GRTAWDLCLKLKEKGLLA 368 (401)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHhcc--CCceeEEeecCeeEEEEeccCcc----------hhHHHHHHHHHHhCCEEE
Confidence 999877889999999999999999873 45667889999999998853210 123467889999999999
Q ss_pred cccCCcceEE--ecCCcHHHHHHHHHHHHHHHh
Q 011959 442 APSQFEAGFT--SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 442 ~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.+.+...+|+ ++.+|+++|++++++|+++++
T Consensus 369 ~~~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 369 KPTHGNIIRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred EecCCCEEEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 8877666777 478999999999999998763
No 79
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=2.9e-55 Score=444.54 Aligned_cols=394 Identities=35% Similarity=0.534 Sum_probs=332.1
Q ss_pred HHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCC
Q 011959 57 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA 136 (474)
Q Consensus 57 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~ 136 (474)
+++++++++.|++ . ...|+++.+++|+++||.||++||||.+|++++++||+||+|++++.+++.++..+..
T Consensus 2 ~~~~~~~~~~~~~-~-------~~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~ 73 (413)
T cd00610 2 FERDRKVLWHGYT-V-------RPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL 73 (413)
T ss_pred cchhhhhcccccc-C-------CCCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccC
Confidence 3566778888764 1 1258999999999999999999999999999999999999999999999987654433
Q ss_pred ---CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCC
Q 011959 137 ---PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (474)
Q Consensus 137 ---~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (474)
.++...+|++.+++.++ +.++++|++||++|++.|++++|.++++++|++++++|||++...+..++....
T Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~----- 148 (413)
T cd00610 74 GFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKY----- 148 (413)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccc-----
Confidence 47889999999999997 689999999999999999999998999999999999999999988887664211
Q ss_pred CCCCCCCCCCCceEEccCC-----------CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCC
Q 011959 213 DSPGVPKGATYETLTAPFN-----------DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 281 (474)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~-----------d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~ 281 (474)
.+.......++..+|++ |++.|++.++++++++++|++||+++++|.+.++++|+++|+++|++||+
T Consensus 149 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~ 226 (413)
T cd00610 149 --RGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGI 226 (413)
T ss_pred --cccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 11111222346778887 89999999987666899999999999999999999999999999999999
Q ss_pred EEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHH
Q 011959 282 LLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHT 360 (474)
Q Consensus 282 llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aa 360 (474)
+||+||+|+|| +.|..+..+++++.||++|+||++++|+|+||+++++++++.+. .....+.+|+++|+++++++.++
T Consensus 227 ~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~g~~~g~~~~~~~~~~~~~-~~~~~~~~t~~~~~~~~~a~~a~ 305 (413)
T cd00610 227 LLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFP-AGPGLHGGTFGGNPLACAAALAV 305 (413)
T ss_pred EEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccCccccEEEEEcHHHHHhhc-cCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999 88877778888999999999999999999999999999999871 12455667999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeE
Q 011959 361 LKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 440 (474)
Q Consensus 361 l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 440 (474)
|+.++++++.+++++++++++++|+++...++.+..+++.|.++++.+.+....+ .++......+.+.|+++||+
T Consensus 306 l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gv~ 380 (413)
T cd00610 306 LEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATK-----PPDKELAAKIIKAALERGLL 380 (413)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcC-----CcchHHHHHHHHHHHHCCeE
Confidence 9998878899999999999999999887656667778889999999986532111 12334557789999999999
Q ss_pred ecccCCcceEE--ecCCcHHHHHHHHHHHHHHH
Q 011959 441 FAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 441 v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~ 471 (474)
+.+.+...+|+ ++.+|+++|++++++|++++
T Consensus 381 v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 381 LRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EeecCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 99875455665 67889999999999998764
No 80
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.7e-54 Score=436.52 Aligned_cols=384 Identities=24% Similarity=0.330 Sum_probs=316.5
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHh
Q 011959 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (474)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 130 (474)
..+++++++-..+...+.. ..|+++.+++|+|+||.||++||||.+++++.++||+||+|.+|+.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~ 72 (401)
T PRK00854 3 NTSEDLIATEQRLGAHNYK----------PLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGR 72 (401)
T ss_pred CCCHHHHHHHhhhhhcccC----------CCCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhh
Confidence 3456677654443333221 237889999999999999999999999999999999999999999999998
Q ss_pred cCCC--CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhh--------cCCcEEEEEeCCCCCCchhHHH
Q 011959 131 GTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLV 200 (474)
Q Consensus 131 ~~~~--~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~--------~~~~~ii~~~~~yhg~~~~~~~ 200 (474)
.... ...++...+|+++|+++++ .++++|++||++|++.|++++|.+ +++++||+++.+|||++..++.
T Consensus 73 ~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~ 151 (401)
T PRK00854 73 LTLTSRAFRNDQLAPLYEELAALTG-SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVG 151 (401)
T ss_pred ccccccccCCHHHHHHHHHHHhhCC-CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHh
Confidence 5322 2456788899999999885 579999999999999999999876 3568999999999999988776
Q ss_pred hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhC
Q 011959 201 KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG 280 (474)
Q Consensus 201 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g 280 (474)
.++.......+ . ....++..+||+|++++++.+. +++++|++||++|++|.+.|+++||++|+++|++||
T Consensus 152 ~~~~~~~~~~~--~-----~~~~~~~~~~~~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~g 221 (401)
T PRK00854 152 FSTDPDARGGF--G-----PFTPGFRVVPFGDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANN 221 (401)
T ss_pred ccCCccccccC--C-----CCCCCeEEeCCCCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 65442211111 0 0112467789999999999886 368999999999999999999999999999999999
Q ss_pred CEEEEeccccCc-ccCCCccccccCCCCceeehhhhcCCC-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHH
Q 011959 281 ALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 358 (474)
Q Consensus 281 ~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~ 358 (474)
++||+||+|+|| ++|.++..+++|+.||++++||++++| +|+|++++++++++.+. ...+..|+++||+.+++++
T Consensus 222 i~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~---~~~~~~t~~~~~~~~aa~~ 298 (401)
T PRK00854 222 VTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLK---PGQHGSTFGGNPLACAVAR 298 (401)
T ss_pred CEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhccc---CCCCCCCCCcCHHHHHHHH
Confidence 999999999999 888766667889999999999999987 69999999999999876 3446678999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCC
Q 011959 359 HTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG 438 (474)
Q Consensus 359 aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 438 (474)
++|+.++++++.++++++++++++.|+++. .....++++.|.|+.+.+..+. .....+++.|+++|
T Consensus 299 a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~g~g~~~~i~~~~~~------------~~~~~~~~~L~~~G 364 (401)
T PRK00854 299 AALKVLTEEGMIENAAEMGAYFLEGLRSIR--SNIVREVRGRGLMLAVELEPEA------------GGARQYCEALKERG 364 (401)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHhhc--cCceEEEeccceEEEEEEecCc------------hhHHHHHHHHHHCC
Confidence 999998777899999999999999998863 2334567889999998875321 12367899999999
Q ss_pred eEecccCCcceEEe--cCCcHHHHHHHHHHHHHHHh
Q 011959 439 VYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 439 v~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~~~~~ 472 (474)
|++.+.+...+|++ +.+|+++|++++++|++++.
T Consensus 365 V~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 365 LLAKDTHDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred eEEecCCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 99987655677775 68999999999999999874
No 81
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-54 Score=435.30 Aligned_cols=365 Identities=28% Similarity=0.435 Sum_probs=314.8
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++++++|+|+||.|||+||||.++++++++||+||+|.+++.+++++... ..++++.+.+|++++++.. +.+++
T Consensus 21 ~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v 99 (396)
T PRK02627 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELS-GMDKV 99 (396)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhc-CCCEE
Confidence 48899999999999999999999999999999999999999999999987432 2357889999999999987 67899
Q ss_pred EEeCCHHHHHHHHHHHhHhhcCC-----cEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCH
Q 011959 159 RFVNSGTEACMGVLRLARAFTGR-----ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~-----~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~ 233 (474)
+|++||+||++.|+++++.++++ ++|+.++++|||++...+..++......... .....+..++++|+
T Consensus 100 ~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~ 172 (396)
T PRK02627 100 FFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFE-------PLVEGFIYVPFNDI 172 (396)
T ss_pred EECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCC-------CCCCCceEeCCCCH
Confidence 99999999999999999988876 8899999999999988888776532211110 01123567788999
Q ss_pred HHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeeh
Q 011959 234 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTL 312 (474)
Q Consensus 234 ~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~ 312 (474)
+++++.+. +++++|++||+++++|...++++++++|+++|++||++||+||+|+|| ++|.+++.+++++.||++||
T Consensus 173 ~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~ 249 (396)
T PRK02627 173 EALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTL 249 (396)
T ss_pred HHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEE
Confidence 99999885 478999999999999988888999999999999999999999999999 88877777788999999999
Q ss_pred hhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011959 313 GKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (474)
Q Consensus 313 sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (474)
||++++|+|+||+++++++++.+. ...+..|+++|+++++++.++|+.++++++.++++++++++++.|.++..+++
T Consensus 250 sK~~~~G~rig~~~~~~~~~~~~~---~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (396)
T PRK02627 250 AKGLGGGVPIGAVLAKEKVADVFT---PGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYP 326 (396)
T ss_pred cchhhCCcccEEEEEcHHHHhccC---CCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999998886 33466799999999999999999888788999999999999999999877777
Q ss_pred CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHH
Q 011959 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~ 470 (474)
....+++.|.++++++... ..++++.|+++||++.+.+.+.+|+ ++.++++++++++++|+++
T Consensus 327 ~~~~~~~~g~~~~i~~~~~---------------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 391 (396)
T PRK02627 327 GIKEVRGLGLMIGIELDRP---------------AAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEV 391 (396)
T ss_pred CeeeeccCcEEEEEEecCc---------------HHHHHHHHHHCCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHH
Confidence 6677888999999988211 2578899999999999877666777 4689999999999999999
Q ss_pred HhhC
Q 011959 471 LRQI 474 (474)
Q Consensus 471 ~~~~ 474 (474)
++++
T Consensus 392 l~~~ 395 (396)
T PRK02627 392 LKEL 395 (396)
T ss_pred HHhh
Confidence 8753
No 82
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=2.3e-53 Score=428.54 Aligned_cols=369 Identities=26% Similarity=0.378 Sum_probs=309.5
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|++++.+++++..... ..++...++++.+.+.. +.+++
T Consensus 13 ~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 91 (400)
T PTZ00125 13 LPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF-GYDKV 91 (400)
T ss_pred CCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC-CCCEE
Confidence 3788999999999999999999999999999999999999999999998743221 23566677777777665 67899
Q ss_pred EEeCCHHHHHHHHHHHhHhh--------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC
Q 011959 159 RFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 230 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~--------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~ 230 (474)
+|++||++|++.|++++|.+ +++++||.++++|||.+...+..++.......+ .+. ...+..+++
T Consensus 92 ~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~ 164 (400)
T PTZ00125 92 LPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF--GPF-----VPGFELVDY 164 (400)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC--CCC-----CCCceEeCC
Confidence 99999999999999998754 246889999999999999988877542211101 011 113566788
Q ss_pred CCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCce
Q 011959 231 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 309 (474)
Q Consensus 231 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi 309 (474)
+|+++|++.++ .+++++|++||+++++|.+.++++|+++|+++|++||++||+||+|+|| ++|.++..+++++.||+
T Consensus 165 ~d~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~ 242 (400)
T PTZ00125 165 NDVEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDI 242 (400)
T ss_pred CCHHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCE
Confidence 99999999996 2479999999999999999999999999999999999999999999999 88877777778999999
Q ss_pred eehhhhcCCCc-ceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Q 011959 310 TTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 388 (474)
Q Consensus 310 ~t~sK~l~~G~-~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~ 388 (474)
+++||++++|+ |+||+++++++++.+.. ..+..|++++|+.++++.++|+.++++++.+++++++++++++|+++.
T Consensus 243 ~~~sK~l~~g~~~ig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~ 319 (400)
T PTZ00125 243 VLLGKALSGGLYPISAVLANDDVMLVIKP---GEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELL 319 (400)
T ss_pred EEEcccccCCCcCcEEEEEcHHHHhhccC---CCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999875 99999999999998863 345678999999999999999998877899999999999999999886
Q ss_pred hhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEe--cCCcHHHHHHHHHH
Q 011959 389 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITA 466 (474)
Q Consensus 389 ~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t~e~i~~~l~~ 466 (474)
..++.+..+++.|.++++++..++ ......+.+.|+++||++.|.+.+.+|++ +.++++++++++++
T Consensus 320 ~~~~~~~~~~~~g~~~~v~~~~~~-----------~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~ 388 (400)
T PTZ00125 320 KKSPWVKEIRGKGLLNAIVFDHSD-----------GVNAWDLCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEI 388 (400)
T ss_pred hcCCCeEEEecccEEEEEEEccCc-----------chHHHHHHHHHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHHH
Confidence 666777778899999999885321 12346788999999999998876778885 77999999999999
Q ss_pred HHHHHhh
Q 011959 467 AEKVLRQ 473 (474)
Q Consensus 467 l~~~~~~ 473 (474)
|++++++
T Consensus 389 l~~~l~~ 395 (400)
T PTZ00125 389 IKKVLKS 395 (400)
T ss_pred HHHHHHH
Confidence 9998875
No 83
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=3.6e-55 Score=391.44 Aligned_cols=401 Identities=21% Similarity=0.334 Sum_probs=328.7
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC
Q 011959 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT 132 (474)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~ 132 (474)
.++.+++.++++.... ..|.+. +|+.+.|++|.|++|.+|++|||++++. ...||+||+|++|...|+...+
T Consensus 7 K~etlklRk~hIG~~C----q~Fy~s--DP~kivRaq~QYmfDE~g~~yLDCInNV--aHvghchp~VV~A~~kQmat~~ 78 (452)
T KOG1403|consen 7 KTETLKLRKQHIGQAC----QLFYRS--DPLKIVRAQGQYMFDEEGTRYLDCINNV--AHVGHCHPEVVRAGAKQMATIS 78 (452)
T ss_pred hHHHHhHHHhccCcce----eEEecC--CchhhehhccceeeccCcccHHHHhhhh--hhcccCCHHHHHHHHHHHhHhc
Confidence 3567777788775433 233322 4999999999999999999999999986 7889999999999999998743
Q ss_pred -CCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcC------CC
Q 011959 133 -SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG------SG 205 (474)
Q Consensus 133 -~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g------~~ 205 (474)
+..+.+....+.|+.|...+|+.+.++|+|||||||+.|||+||.++++.++|..+..|||+....+..+. .+
T Consensus 79 tN~RFlhd~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~ 158 (452)
T KOG1403|consen 79 TNNRFLHDELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGG 158 (452)
T ss_pred ccchhhHHHHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCC
Confidence 33345666688999999999999999999999999999999999999999999999999999877765542 22
Q ss_pred CccCCCCCCCCCCCCCCCceEEccCC-------C-----HHHHHHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHH
Q 011959 206 VATLGLPDSPGVPKGATYETLTAPFN-------D-----VSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (474)
Q Consensus 206 ~~~~~~~~~~g~~~~~~~~~~~~~~~-------d-----~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (474)
+....+ +--...+++++-.|. | .+.++++++. .+..++++|.|+.++-||.+.||.+|++
T Consensus 159 v~kpd~-----VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq 233 (452)
T KOG1403|consen 159 VAKPDY-----VHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQ 233 (452)
T ss_pred cCCCce-----eEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHH
Confidence 211111 000001112222221 1 3455666643 2346899999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCc-ccCC-CccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCC
Q 011959 271 AIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 348 (474)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~ 348 (474)
.+.+..+.+|-+.|.||||+|| |.|. .|+++.+++.|||+|++|.+|+|.|+++++.++++.+.+...+ +-.+.||+
T Consensus 234 ~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atg-v~YFNTyG 312 (452)
T KOG1403|consen 234 AVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATG-VEYFNTYG 312 (452)
T ss_pred HHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCCeeeEEeccHHHHHHhcccc-ceehhccC
Confidence 9999999999999999999999 9885 6788999999999999999999999999999999999997433 34567999
Q ss_pred CChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHH
Q 011959 349 GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 428 (474)
Q Consensus 349 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 428 (474)
+||++|+++++.++.++++++.++.++.+++|...|.++..++.+++++||.|+|+++++.++.. .+.|+...+.
T Consensus 313 GnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~-----tRtP~tk~A~ 387 (452)
T KOG1403|consen 313 GNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRK-----TRTPDTKEAH 387 (452)
T ss_pred CCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccc-----cCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987632 3457777778
Q ss_pred HHHHHHHHC-CeEecccCCcceE----EecCCcHHHHHHHHHHHHHHHh
Q 011959 429 RFYRGMLEE-GVYFAPSQFEAGF----TSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 429 ~~~~~l~~~-Gv~v~~~~~~~~~----~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.+..+|.+. ||++...|..... ++++.+++++++++..|++++.
T Consensus 388 ~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 388 WVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred HHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 888888865 7999887765443 3789999999999999999874
No 84
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.7e-53 Score=423.68 Aligned_cols=360 Identities=27% Similarity=0.352 Sum_probs=304.7
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++.+++|+|+||.||++||||.+++++.++|| ||+|++|+.+++++...+ ....+.+.++++.+... ....+
T Consensus 11 ~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~--~~~~~ 87 (375)
T PRK04260 11 AAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD--KDYLA 87 (375)
T ss_pred CCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcC--cCCEE
Confidence 37899999999999999999999999999999999 999999999999874222 23567778888877542 12367
Q ss_pred EEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHH
Q 011959 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~ 238 (474)
+|++||+||++.|++++|.++++++||.++++|||++...+..++.......+ ...+ ..+...++||++++++
T Consensus 88 ~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~dl~~l~~ 160 (375)
T PRK04260 88 FFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGF--GDGV-----PHFSYAIFNDLNSVKA 160 (375)
T ss_pred EEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCC--CCCC-----CCeEEeCCCCHHHHHH
Confidence 99999999999999999999999999999999999998888777653322111 1111 1133346789999999
Q ss_pred HHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcC
Q 011959 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG 317 (474)
Q Consensus 239 ~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~ 317 (474)
.+. +++++|++||+++++|.+.++++||++|+++|++||+++|+||+|+|| ++|.++..+++++.||++||||+++
T Consensus 161 ~l~---~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~ 237 (375)
T PRK04260 161 LVN---KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLA 237 (375)
T ss_pred hcC---CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEeccccc
Confidence 885 368999999999999999999999999999999999999999999999 8877767778899999999999999
Q ss_pred CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEE
Q 011959 318 GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (474)
Q Consensus 318 ~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (474)
+|+|+||+++++++++.+. ...+.+|+++||++++++.++|+.++.+++.++++++++++++.|.+++.+++.+..+
T Consensus 238 ~G~~ig~~~~~~~~~~~~~---~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (375)
T PRK04260 238 NGVPVGAMLAKSSLGGAFG---YGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV 314 (375)
T ss_pred CCcceEEEEEcHHHHhhcC---CCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE
Confidence 9999999999999998886 3346779999999999999999998878899999999999999999988777767788
Q ss_pred eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHH
Q 011959 398 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 398 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~ 471 (474)
++.|+++++++... ...+.+.|.++||++.+.+...+|+ ++.+|++++++++++|++++
T Consensus 315 ~~~g~~~~~~~~~~---------------~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 315 RGLGYMIGIETTAD---------------LSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred eccceEEEEEecCc---------------HHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 89999999998321 2578899999999998876566666 47889999999999998763
No 85
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=7.6e-49 Score=393.05 Aligned_cols=361 Identities=30% Similarity=0.441 Sum_probs=301.4
Q ss_pred CCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCCCCeE
Q 011959 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMV 158 (474)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~~~v 158 (474)
.|+++++++|+++||.||++||||.++++++++||+||.|.+++.+++++... ..++.+...+|++++++++ +.+++
T Consensus 9 ~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~~~ 87 (379)
T TIGR00707 9 LPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHS-GADRV 87 (379)
T ss_pred CCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC-CCCEE
Confidence 58999999999999999999999999999999999999999999999987421 2346788999999999999 56799
Q ss_pred EEeCCHHHHHHHHHHHhHhhcC-----CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCH
Q 011959 159 RFVNSGTEACMGVLRLARAFTG-----RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~-----~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~ 233 (474)
++++||++|++.++++++.+++ +++|++++++|||+...+...++....... .. ....+...+++||+
T Consensus 88 ~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~d~ 160 (379)
T TIGR00707 88 FFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKG-----FE--PLVPGFSYAPYNDI 160 (379)
T ss_pred EEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhcc-----CC--CCCCCceeeCCCCH
Confidence 9999999999999999887765 689999999999999888777654322100 00 11123456688899
Q ss_pred HHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeeh
Q 011959 234 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTL 312 (474)
Q Consensus 234 ~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~ 312 (474)
+++++.+.. ++++|+++|+++++|...++.+++++|.++|++||+++|+||+|+|| +.|.++..+.+++.||++||
T Consensus 161 ~~l~~~~~~---~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~ 237 (379)
T TIGR00707 161 ESLKKAIDD---ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITL 237 (379)
T ss_pred HHHHHHhhh---CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEE
Confidence 999998863 57899999998888887778888999999999999999999999999 77665555667889999999
Q ss_pred hhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011959 313 GKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (474)
Q Consensus 313 sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (474)
||++++|+|+||+++++++++.+.. ..+..+++.|+++++++.++|+.+++.++.+++++++++++++|+++....+
T Consensus 238 sK~~~~G~riG~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (379)
T TIGR00707 238 AKGLGGGVPIGATLAKEEVAEAFTP---GDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYP 314 (379)
T ss_pred cccccCCcccEEEEEcHHHHhhhcC---CCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999998873 3345678899999999999999887778899999999999999998765554
Q ss_pred CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEe--cCCcHHHHHHHHHHHHHH
Q 011959 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~~~ 470 (474)
. ..+++.|.++++.+..+ ..++.+.|.++||++.|.+.+.+|++ +.+|++++++++++|+++
T Consensus 315 ~-~~~~~~g~~~~~~~~~~---------------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 315 N-KEVRGKGLMLGIELEAP---------------CKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred C-CccccCceEEEEEecCc---------------HHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 3 34556788888887421 25788899999999999776677876 578999999999999876
Q ss_pred H
Q 011959 471 L 471 (474)
Q Consensus 471 ~ 471 (474)
+
T Consensus 379 ~ 379 (379)
T TIGR00707 379 I 379 (379)
T ss_pred C
Confidence 3
No 86
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-43 Score=321.40 Aligned_cols=395 Identities=19% Similarity=0.238 Sum_probs=313.8
Q ss_pred CCCchhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHH
Q 011959 47 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGE 126 (474)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~ 126 (474)
..+.++|+++.+...++...+ .++. +.-.++.-|.|++|+|||.+||..+..++.++|++||.+++++..
T Consensus 34 sIPGPks~~l~kel~~v~~t~---~v~F-------~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~ 103 (484)
T KOG1405|consen 34 SIPGPKSQELKKELDKVQDTE---AVHF-------FVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQ 103 (484)
T ss_pred cCCCchhHHHHHHHhHhhccc---ceEE-------ehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcC
Confidence 456789999998888776542 2222 344678999999999999999999999999999999999998764
Q ss_pred -HHHh-cC---CCC-C-CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhh--------------------
Q 011959 127 -TMKK-GT---SFG-A-PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-------------------- 178 (474)
Q Consensus 127 -~~~~-~~---~~~-~-~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~-------------------- 178 (474)
++.+ .. ..| + +.+..+.|.+.+....| +.++|++.-+|+.|||.|++.|..+
T Consensus 104 p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm 183 (484)
T KOG1405|consen 104 PQNATMLVNRPALGNFPPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCM 183 (484)
T ss_pred hHHHHHHhccccccCCChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHH
Confidence 2222 11 112 2 34555666666777778 7889999999999999999987433
Q ss_pred ------cCCcEEEEEeCCCCCCchhHHHhcCCC-CccCCCCCCCCCCCCCCCceEEccC------C------CHHHHHHH
Q 011959 179 ------TGRERIIKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPF------N------DVSALENL 239 (474)
Q Consensus 179 ------~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~------~------d~~~le~~ 239 (474)
++.-.|+.|.++|||.+.+.++.+.+. +..+..|..+.-... .+.+.+|. | .++++|++
T Consensus 184 ~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~--fP~ykYPLdenv~~N~ked~~Cl~~Ve~l 261 (484)
T KOG1405|consen 184 INQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAP--FPRYKYPLDENVAENKKEDQGCLAEVEDL 261 (484)
T ss_pred hcCCCCCCceeeeeeccccccccccccccccCccccccCCCCCCCCCCC--CccccCChhhhhhhhhhhhhhHHHHHHHH
Confidence 123359999999999999999888653 455555544432111 12333443 2 47889999
Q ss_pred HhcCC---CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCC--Cceeehh
Q 011959 240 FENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT--PDLTTLG 313 (474)
Q Consensus 240 l~~~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~--pdi~t~s 313 (474)
|.++. ..++++|+||+|++||....+++|+++|+++|+|||+.+|+||||||. -+|+.|+.+|+++. ||++|||
T Consensus 262 i~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFS 341 (484)
T KOG1405|consen 262 IVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFS 341 (484)
T ss_pred HHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehh
Confidence 98754 468999999999999999999999999999999999999999999999 89999999999885 7999999
Q ss_pred hhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011959 314 KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG- 392 (474)
Q Consensus 314 K~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~- 392 (474)
|-|-. .|++ -.+ .+++..++.++.||.+.|.-+....++++.+.++++.+++...+++|..+|.++..++|
T Consensus 342 KK~q~---gGff-h~~----~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~ 413 (484)
T KOG1405|consen 342 KKFQT---GGFF-HDE----EFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPG 413 (484)
T ss_pred hhhhc---Cccc-cCc----ccCCCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 99873 2333 232 34444566788999999999999999999999999999999999999999999999887
Q ss_pred CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHH
Q 011959 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~ 470 (474)
.+-..||+|.|+.+++..+ ...+.+...+.-+|+.+..++...+|+ ++..++.+.+-++++|++.
T Consensus 414 ~~~~~RGrGTF~a~d~ps~-------------~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~ 480 (484)
T KOG1405|consen 414 KINNLRGRGTFIAWDCPSG-------------SIRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKI 480 (484)
T ss_pred hhhcccccceEEEEeCCCh-------------HHHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHH
Confidence 4557899999999988543 344678889999999999988776655 7899999999999999999
Q ss_pred HhhC
Q 011959 471 LRQI 474 (474)
Q Consensus 471 ~~~~ 474 (474)
++.+
T Consensus 481 l~~l 484 (484)
T KOG1405|consen 481 LAGL 484 (484)
T ss_pred hccC
Confidence 8764
No 87
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=2.4e-39 Score=330.32 Aligned_cols=374 Identities=20% Similarity=0.301 Sum_probs=285.9
Q ss_pred hHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHh
Q 011959 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK 130 (474)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~ 130 (474)
..+|.-+..++|.|.....+...... ...+++++++|+++| .||++||||.++ +++|. +||+|++++.+++++
T Consensus 65 ~~~~~~~l~~~~~p~~l~~~~~~~~~--~~~~~~~~~~G~~i~-~~G~~~id~~s~---~~lgl~~~~~i~ea~~~al~~ 138 (481)
T PLN02822 65 TEKEIDELCDEWTPEPLIPPITEEMR--PEPPVLESAAGPHTI-INGKDVVNFASA---NYLGLIGNEKIKESCTSALEK 138 (481)
T ss_pred CHHHHHHHHhcCCCCCCCCCCchhcc--ccCCceecCCCCeEE-ECCceEEEeECC---CcCCCCCCHHHHHHHHHHHHH
Confidence 45678888899999887655432222 124578999999999 899999999998 77777 699999999999988
Q ss_pred -cCC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcC
Q 011959 131 -GTS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG 203 (474)
Q Consensus 131 -~~~------~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g 203 (474)
+.+ ++++.+...+|+++|+++++..+.++|++|++ ++..+++ ++++++++|++++.||+.....+.+.+
T Consensus 139 ~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~-a~~sai~---a~~~~gd~Ii~d~~~H~s~~~~~~ls~ 214 (481)
T PLN02822 139 YGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLS-TIFSVIP---AFCKKGDIIVADEGVHWGIQNGLYLSR 214 (481)
T ss_pred hCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHH-HHHHHHH---HhCCCCCEEEEeCCccHHHHHHHHHcC
Confidence 432 33567889999999999998677788876555 7888888 788899999999999987655554433
Q ss_pred CCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC------CCe-EEEEEccccCCCCcccCCHHHHHHHHHHH
Q 011959 204 SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK------GEI-AAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (474)
Q Consensus 204 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~------~~~-a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (474)
.+++.++|||.++++..+++.. +++ ++|++|++++++|.+.| +++|+++|
T Consensus 215 -------------------~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~ 271 (481)
T PLN02822 215 -------------------STIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLK 271 (481)
T ss_pred -------------------CeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHH
Confidence 2467889999999988776421 234 89999999999999999 99999999
Q ss_pred HHhCCEEEEecccc-C-c-ccCCCccccccCC---CCceee--hhhhcC-CCcceEEEEecHHHHHhhcCCCCcccccCC
Q 011959 277 KENGALLIFDEVMT-G-F-RLAYGGAQEYFGV---TPDLTT--LGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 347 (474)
Q Consensus 277 ~~~g~llI~DEv~~-g-~-r~g~~~~~~~~g~---~pdi~t--~sK~l~-~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~ 347 (474)
++||++||+||+|+ | + ++|. +..+++++ .+|+++ |||+++ .| ||+++++++++.++. ..+..+|
T Consensus 272 ~k~~~~LIvDEa~s~gvlG~~G~-G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~~---~~~~~~f 344 (481)
T PLN02822 272 EKYRFRVLLDESNSFGVLGKSGR-GLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQRL---SSSGYVF 344 (481)
T ss_pred HHcCCEEEEECCccccccCCCCC-ChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHHh---cCCceee
Confidence 99999999999996 2 2 3443 46788988 688875 889998 33 889999999998873 2345577
Q ss_pred CCC--hHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccch
Q 011959 348 SGN--PLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSET 424 (474)
Q Consensus 348 ~~~--~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~ 424 (474)
+++ |..++|++++|+.+++ ++++++++++++++++.|++.. ++.....+.+.++.+.+.+.. . ....+.
T Consensus 345 sa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~-~----~~~~~~ 416 (481)
T PLN02822 345 SASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKST-G----SAKEDL 416 (481)
T ss_pred ccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCc-c----cccchH
Confidence 665 8889999999998876 6788999999999999998752 222223345667777774210 0 001122
Q ss_pred HHHHHHHHHHH-HCCeEecccCC---------cceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 425 TKFARFYRGML-EEGVYFAPSQF---------EAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 425 ~~~~~~~~~l~-~~Gv~v~~~~~---------~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
....++++.|+ ++||++.+..+ +.+|+ +..+|++||++++++|++++++
T Consensus 417 ~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 417 SLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred HHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 34568899998 88999987532 23565 5779999999999999998865
No 88
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-37 Score=309.42 Aligned_cols=361 Identities=18% Similarity=0.261 Sum_probs=251.8
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCC-CCCHHHHHHHHHHHHh-
Q 011959 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIG-HADDQVLAALGETMKK- 130 (474)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG-~~~p~v~~a~~~~~~~- 130 (474)
.+....|+++.+. +.+.. ++.++.+.+++|+++||.||++||||.++ +++| |+||+|++|+.+++++
T Consensus 8 ~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~ 76 (402)
T PRK07505 8 NKKRINRAEKFWD-------AAYDE-GLNGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRT 76 (402)
T ss_pred HHHHHHhhHHHHH-------HHHhc-ccccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHh
Confidence 4455666665432 22211 22467899999999999999999999985 8999 9999999999999987
Q ss_pred c-CCCC-----CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHh--hc-CCcEEEEEeCCCCCCchhHHHh
Q 011959 131 G-TSFG-----APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA--FT-GRERIIKFEGCYHGHADPFLVK 201 (474)
Q Consensus 131 ~-~~~~-----~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~--~~-~~~~ii~~~~~yhg~~~~~~~~ 201 (474)
+ ..++ ...+...+++++|++.++. ++++++||++|++.++++++. ++ ++.++|+++++|||......
T Consensus 77 g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~-- 152 (402)
T PRK07505 77 GSLHLSSSRTRVRSQILKDLEEALSELFGA--SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILK-- 152 (402)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHhCC--CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhh--
Confidence 3 2221 2356788999999999854 778888999999999998653 24 56779999999998421110
Q ss_pred cCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCC
Q 011959 202 AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 281 (474)
Q Consensus 202 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~ 281 (474)
+ ... ...++..+|++|+++++++++.+ ..+++++||++++ |.+.+ +++|+++|++||+
T Consensus 153 -~-------------~~~-~~~~v~~~~~~d~~~l~~~~~~~--~~~~vl~~p~~~~-G~~~~----~~~i~~l~~~~~~ 210 (402)
T PRK07505 153 -G-------------ICA-DETEVETIDHNDLDALEDICKTN--KTVAYVADGVYSM-GGIAP----VKELLRLQEKYGL 210 (402)
T ss_pred -h-------------hhh-cCCeEEEeCCCCHHHHHHHHhcC--CCEEEEEeccccc-CCcCC----HHHHHHHHHHcCC
Confidence 0 000 01257788999999999988643 4688899998765 66777 8999999999999
Q ss_pred EEEEeccc--cCc-ccCCCccccccCC-CCcee----ehhhhcCCCcceEEEE-ecHHHHHhhcCCCCcccccCCCC--C
Q 011959 282 LLIFDEVM--TGF-RLAYGGAQEYFGV-TPDLT----TLGKIIGGGLPVGAYG-GRRDIMEMVAPAGPMYQAGTLSG--N 350 (474)
Q Consensus 282 llI~DEv~--~g~-r~g~~~~~~~~g~-~pdi~----t~sK~l~~G~~iG~~~-~~~~i~~~~~~~~~~~~~~t~~~--~ 350 (474)
+||+||+| ++| ++|.++..++++. .||.+ |+||+++++ .|+++ .++++++.+.. ..+..||++ +
T Consensus 211 ~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~---~~~~~t~~~~~~ 285 (402)
T PRK07505 211 FLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILR---YAGPLAFSQSLN 285 (402)
T ss_pred EEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHH---hCCCceeCCCCC
Confidence 99999998 567 7777666677887 67743 799999853 37765 47888888763 223445554 4
Q ss_pred hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHH
Q 011959 351 PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 430 (474)
Q Consensus 351 ~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 430 (474)
++++++++++++.+.++.+.+. .+++++.+..... . ....+++.+.++...... +.....++
T Consensus 286 ~~a~aa~~a~l~~~~~~~~~~~----~~~l~~~~~~~~~-~-~~~~~~g~~~~i~~~~~~------------~~~~~~~~ 347 (402)
T PRK07505 286 VAALGAILASAEIHLSEELDQL----QQKLQNNIALFDS-L-IPTEQSGSFLPIRLIYIG------------DEDTAIKA 347 (402)
T ss_pred HHHHHHHHHHHHHHhccCcHHH----HHHHHHHHHHHHH-H-HHhcCCCCCCCEEEEEeC------------CHHHHHHH
Confidence 5899999999987655444332 2333333322110 0 011124444443222111 11234678
Q ss_pred HHHHHHCCeEecccCC-------cceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 431 YRGMLEEGVYFAPSQF-------EAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 431 ~~~l~~~Gv~v~~~~~-------~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.+.|+++||++.+..+ ..+|++ +.+|+|++++++++|++++++
T Consensus 348 ~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 348 AKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred HHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 8999999999987521 346664 568999999999999998864
No 89
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=2.9e-35 Score=285.87 Aligned_cols=333 Identities=23% Similarity=0.319 Sum_probs=264.8
Q ss_pred EeeccCEEEEcCCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCCe
Q 011959 86 DSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEM 157 (474)
Q Consensus 86 ~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~-~~~~------~~~~~~~~~la~~l~~~~~~~~~ 157 (474)
.+..+..++ .+|++++||++| +|||. .||++++++.+.+++ +... .++.+...+|.++|++++ +.|.
T Consensus 27 ~~~~~~~~~-~~~~~~~nf~SN---dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~-g~e~ 101 (388)
T COG0156 27 DRRQGLAIR-ADGRKVLNFCSN---DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL-GAEA 101 (388)
T ss_pred cccCCccee-cCCceeEeeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh-CCCc
Confidence 334455554 669999999999 99999 599999999999988 4322 246788888999998888 7889
Q ss_pred EEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHH
Q 011959 158 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 237 (474)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le 237 (474)
+++.+||..||..++. ++.+++++|+.|.-.|.+....+.++ ..+++.++|||+++||
T Consensus 102 al~f~SGy~AN~~~i~---~l~~~~dli~~D~lnHASiidG~rls-------------------~a~~~~f~HnD~~~Le 159 (388)
T COG0156 102 ALLFSSGFVANLGLLS---ALLKKGDLIFSDELNHASIIDGIRLS-------------------RAEVRRFKHNDLDHLE 159 (388)
T ss_pred EEEEcccchhHHHHHH---HhcCCCcEEEEechhhhhHHHHHHhC-------------------CCcEEEecCCCHHHHH
Confidence 9999999999999999 78899999999999999765554433 3468899999999999
Q ss_pred HHHhcCC---CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCCCCc---e
Q 011959 238 NLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPD---L 309 (474)
Q Consensus 238 ~~l~~~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pd---i 309 (474)
++++++. .+.+.|++|.+++|.|++.| |++|.+||+||+++|++||+| .|+ .....+..+++|+.++ +
T Consensus 160 ~~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi 235 (388)
T COG0156 160 ALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDI 235 (388)
T ss_pred HHHHhhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceE
Confidence 9998632 14689999999999999999 999999999999999999999 677 5545667788888754 3
Q ss_pred e--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHH
Q 011959 310 T--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIID 386 (474)
Q Consensus 310 ~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~ 386 (474)
+ ||||+||+ --|++.+++.+++.+....+.+.++| +.+|..++++.++|+.+++ ++.+++++++..++++.+..
T Consensus 236 ~~gTlsKAlGs--~Gg~v~g~~~~~d~L~~~ar~~ifSt-alpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~ 312 (388)
T COG0156 236 IVGTLGKALGS--SGGYIAGSAALIDYLRNRARPFIFST-ALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKA 312 (388)
T ss_pred EEEEchhhhcc--cCceeeCcHHHHHHHHHhCCceeccC-CCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 3 89999995 14667899999999987667777755 7889999999999999987 78899999999999966654
Q ss_pred HhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcc-------eEE--ecCCcH
Q 011959 387 AGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------GFT--SLAHSS 457 (474)
Q Consensus 387 ~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~-------~~~--~~~~t~ 457 (474)
..... .+....++.+.+ .+...+.++...|+++||++.+..++. +|+ +..||+
T Consensus 313 ~~~~~-----~~s~s~I~pv~~-------------gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~ 374 (388)
T COG0156 313 LGLVL-----LPSESPIIPVIL-------------GDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTE 374 (388)
T ss_pred cCCcc-----CCCCCCeeeeEe-------------CCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCH
Confidence 32111 112222333333 345567888999999999998776554 344 688999
Q ss_pred HHHHHHHHHHHHH
Q 011959 458 DDIQHTITAAEKV 470 (474)
Q Consensus 458 e~i~~~l~~l~~~ 470 (474)
+||+.+++.|.++
T Consensus 375 ~~I~~l~~~l~~~ 387 (388)
T COG0156 375 EDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999875
No 90
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=5.4e-34 Score=287.53 Aligned_cols=326 Identities=19% Similarity=0.208 Sum_probs=246.2
Q ss_pred CCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhc-CCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 168 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~-~~~------~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~ 168 (474)
+|+++|+|+++ +|||. +||+|++++.+++++. ... .+..+...+|+++++++++ .+++++++||++|+
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g-~~~~~~~~SG~~An 118 (406)
T PRK13393 43 GPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG-KEAALLFTSGYVSN 118 (406)
T ss_pred CCccEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC-CCcEEEeCCcHHHH
Confidence 46899999999 99999 6999999999999873 211 1235578899999999985 57899999999999
Q ss_pred HHHHH-HhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC-CCC
Q 011959 169 MGVLR-LARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGE 246 (474)
Q Consensus 169 ~~al~-~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~ 246 (474)
+.+++ +++.. ++++|+++..||+.....+...+. ++..++++|++++++.++.. +++
T Consensus 119 ~~ai~~l~~~~--~g~~I~~~~~~H~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~ 177 (406)
T PRK13393 119 WAALSTLGSRL--PGCVILSDELNHASMIEGIRHSRA-------------------EKRIFRHNDPADLERKLSDLDPHR 177 (406)
T ss_pred HHHHHHhhcCC--CCCEEEEccchhHHHHHHHHHcCC-------------------eEEEeCCCCHHHHHHHHHhccCCC
Confidence 99999 43322 456889999999977666543322 24567888999999988754 235
Q ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--ccCCCccccccCCC--Ccee--ehhhhcCCC
Q 011959 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGVT--PDLT--TLGKIIGGG 319 (474)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~~--pdi~--t~sK~l~~G 319 (474)
+++|++|++++++|.+.| +++|+++|++||+++|+||+|+ |+ +.|..+ .+++++. +|++ ||||+++.
T Consensus 178 ~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~- 251 (406)
T PRK13393 178 PKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGV- 251 (406)
T ss_pred CEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcc-
Confidence 789999999999999999 9999999999999999999995 77 445433 3666665 5676 89999983
Q ss_pred cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEe
Q 011959 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGG 398 (474)
Q Consensus 320 ~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 398 (474)
..||+++++++++.+......+. .+.+.+|.+++++.++|+.+++. ...++++++++++++.|+++. +. .++
T Consensus 252 -~GG~~~~~~~~~~~l~~~~~~~~-~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~---~~~ 324 (406)
T PRK13393 252 -MGGYITGSAALCDFIRSFASGFI-FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAG--IP---HLP 324 (406)
T ss_pred -cCceeeCCHHHHHHHHHhCcCce-ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC--CC---cCC
Confidence 22788899999888864322222 35678899999999999987653 234566788888888887642 22 235
Q ss_pred eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHH-CCeEecccC-------CcceEE--ecCCcHHHHHHHHHHHH
Q 011959 399 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ-------FEAGFT--SLAHSSDDIQHTITAAE 468 (474)
Q Consensus 399 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~-------~~~~~~--~~~~t~e~i~~~l~~l~ 468 (474)
+.|.++.+.+.+ .....++.+.|++ +||++.+.. ...+|+ ++.+|++|+|+++++|+
T Consensus 325 ~~~~i~~v~~~~-------------~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~ 391 (406)
T PRK13393 325 NPSHIVPVMVGD-------------PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALS 391 (406)
T ss_pred CCCCeEEEEeCC-------------HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 677777765421 1234678888887 599987642 234666 57899999999999999
Q ss_pred HHHhh
Q 011959 469 KVLRQ 473 (474)
Q Consensus 469 ~~~~~ 473 (474)
+++++
T Consensus 392 ~~~~~ 396 (406)
T PRK13393 392 EIWAR 396 (406)
T ss_pred HHHHh
Confidence 98765
No 91
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=3.6e-34 Score=284.39 Aligned_cols=327 Identities=17% Similarity=0.176 Sum_probs=251.1
Q ss_pred CCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 168 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~-~~~~------~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~ 168 (474)
.++++|||+++ +|||. .||++++++.+.+++ +++. .+......+|.+.|++++ +.|.+++++||..||
T Consensus 100 ~~r~~l~FsSn---dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~-g~e~all~sSGy~AN 175 (476)
T PLN02955 100 RFKKLLLFSGN---DYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK-KKEDCLVCPTGFAAN 175 (476)
T ss_pred CCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH-CCCcEEEECChHHHH
Confidence 45789999999 99999 599999999999987 3322 235667778888888888 788999999999999
Q ss_pred HHHHHHhHh-----------hcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHH
Q 011959 169 MGVLRLARA-----------FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 237 (474)
Q Consensus 169 ~~al~~ar~-----------~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le 237 (474)
..++...-. ..+++.+|+.|...|.+....+.++.. ....+++.++|||+++|+
T Consensus 176 ~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~---------------~~~a~~~~f~HND~~~Le 240 (476)
T PLN02955 176 MAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAER---------------QGNVEVFVYRHCDMYHLN 240 (476)
T ss_pred HHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccc---------------cCCceEEEeCCCCHHHHH
Confidence 999984210 135677888899999876655543321 001247889999999999
Q ss_pred HHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc--ccCCCccccccCCCCce----ee
Q 011959 238 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF--RLAYGGAQEYFGVTPDL----TT 311 (474)
Q Consensus 238 ~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~--r~g~~~~~~~~g~~pdi----~t 311 (474)
+++++++++.+.|++|+++++.|.+.| |++|.++|++||++||+||+|+.+ .....+..+++|+.+|+ .|
T Consensus 241 ~~L~~~~~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~T 316 (476)
T PLN02955 241 SLLSSCKMKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGT 316 (476)
T ss_pred HHHHhCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEe
Confidence 999877666789999999999999999 999999999999999999999744 33336677889987765 48
Q ss_pred hhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhh
Q 011959 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKK 390 (474)
Q Consensus 312 ~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~ 390 (474)
|||++|. +.|++++++++++.++..++.+.++| +.+|..+++++++++.+.+ +..+++++++.+++++.+
T Consensus 317 LsKA~G~--~GGfi~gs~~~~~~l~~~~~~~ifSt-alpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~------ 387 (476)
T PLN02955 317 LSKAAGC--HGGFIACSKKWKQLIQSRGRSFIFST-AIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS------ 387 (476)
T ss_pred Cccchhc--cCceeecHHHHHHHHHHhCCCCeecc-cccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc------
Confidence 9999973 45778999999999986666677766 5667777788899998765 456677888888887631
Q ss_pred cCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcc-------eEE--ecCCcHHHHH
Q 011959 391 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------GFT--SLAHSSDDIQ 461 (474)
Q Consensus 391 ~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~-------~~~--~~~~t~e~i~ 461 (474)
+... ...++.+.+ ++......+.+.|+++||++.+..++. +|+ +..||++||+
T Consensus 388 -G~~~----~sPI~pI~i-------------g~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId 449 (476)
T PLN02955 388 -GVDI----SSPIISLVV-------------GNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVK 449 (476)
T ss_pred -CCCC----CCCEEEEEe-------------CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHH
Confidence 2111 133444444 344556788999999999998776543 454 5799999999
Q ss_pred HHHHHHHHHHhh
Q 011959 462 HTITAAEKVLRQ 473 (474)
Q Consensus 462 ~~l~~l~~~~~~ 473 (474)
+++++|.++.+.
T Consensus 450 ~lv~~L~~~~~~ 461 (476)
T PLN02955 450 KLITALSSCLDF 461 (476)
T ss_pred HHHHHHHHHHhh
Confidence 999999987653
No 92
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=1e-33 Score=285.38 Aligned_cols=328 Identities=21% Similarity=0.213 Sum_probs=244.0
Q ss_pred CCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhc-CC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 168 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~-~~------~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~ 168 (474)
+|+++++|.++ +|||. +||+|++|+.+++++. .. ..+..+...+|++.++++++ .+.+++++||++||
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g-~~~~l~~~sG~~an 118 (402)
T TIGR01821 43 GAKDVTVWCSN---DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG-KESALVFTSGYVAN 118 (402)
T ss_pred CCeeEEEeEcc---CcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC-CCeEEEECchHHHH
Confidence 46999999999 99999 5999999999999883 22 12356778899999999985 56789999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC-CCe
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEI 247 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~ 247 (474)
+.++++++.. .++++|+.+..||+.....+...+. ++..++++|+++++++++... +++
T Consensus 119 ~~ai~~l~~~-~~~~~v~~~~~~h~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~~ 178 (402)
T TIGR01821 119 DATLATLAKI-IPGCVIFSDELNHASMIEGIRHSGA-------------------EKFIFRHNDVAHLEKLLQSVDPNRP 178 (402)
T ss_pred HHHHHHhhCC-CCCCEEEEcchHhHHHHHHHHHcCC-------------------eEEEECCCCHHHHHHHHHhccCCCC
Confidence 9999975432 2467778888899866555443322 234567789999999987543 357
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--ccCCCccccccCC--CCcee--ehhhhcCCCc
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGGL 320 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~--~pdi~--t~sK~l~~G~ 320 (474)
++|++|++++++|.+.| +++|+++|++||++||+||+|+ |+ ..|. +..+++++ .+|++ ||||+++.
T Consensus 179 ~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~-g~~~~~~~~~~~div~~t~sKa~g~-- 251 (402)
T TIGR01821 179 KIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGG-GIAERDGLMHRIDIIEGTLAKAFGV-- 251 (402)
T ss_pred eEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCC-ccchhccCCCCCeEEEEechhhhcc--
Confidence 89999999999999998 9999999999999999999996 65 3333 23455665 36776 89999983
Q ss_pred ceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 321 ~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
..||+++++++++.+......+. .+.+.+|.++++++++|+.+++. .+.++++++++++++.|+++. +.+ +.+
T Consensus 252 ~GG~i~~~~~~~~~l~~~~~~~~-~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~---~~~ 325 (402)
T TIGR01821 252 VGGYIAASRKLIDAIRSYAPGFI-FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG--IPV---IPN 325 (402)
T ss_pred CCceeecCHHHHHHHHHhCcCce-ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC--CCc---CCC
Confidence 22788899999988864322222 35578999999999999988763 456667788888888887652 221 234
Q ss_pred eceeEEEEEecCCCcCcccccccchHHHHHHHHHHHH-CCeEecccC-------CcceEE--ecCCcHHHHHHHHHHHHH
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ-------FEAGFT--SLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~-------~~~~~~--~~~~t~e~i~~~l~~l~~ 469 (474)
.+.++.+.+.. .....++.+.|++ +||++.+.. ...+|+ ++.+|++|+++++++|++
T Consensus 326 ~~~i~~i~~~~-------------~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 326 PSHIVPVIIGD-------------AALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLL 392 (402)
T ss_pred CCCEEEEEeCC-------------HHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 56666665421 1234568888875 599987642 234555 468999999999999999
Q ss_pred HHhhC
Q 011959 470 VLRQI 474 (474)
Q Consensus 470 ~~~~~ 474 (474)
+++++
T Consensus 393 ~~~~~ 397 (402)
T TIGR01821 393 VWDRL 397 (402)
T ss_pred HHHHc
Confidence 88753
No 93
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=8.6e-33 Score=279.22 Aligned_cols=326 Identities=21% Similarity=0.224 Sum_probs=242.2
Q ss_pred CCEEEeccCChhhccCCCC-CHHHHHHHHHHHHhc-CC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHA-DDQVLAALGETMKKG-TS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACM 169 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~-~~------~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~ 169 (474)
|++++||+++ +|||++ ||+|++++.+++++. .. +.++.+...+|+++|+++++ .+..++++||++|++
T Consensus 45 ~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-~~~~~~~~sG~~an~ 120 (407)
T PRK09064 45 EREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-KEAALVFTSGYVSND 120 (407)
T ss_pred CceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-CCcEEEECcHHHHHH
Confidence 5899999999 999996 999999999999873 21 12356778999999999885 567888899999999
Q ss_pred HHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC-CCeE
Q 011959 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIA 248 (474)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~a 248 (474)
.++++++.. .++.+|+.+..+|+.....+...+. +...++++|+++++++++... ++++
T Consensus 121 ~ai~~l~~~-~~~~~i~~~~~~h~s~~~~~~~~~~-------------------~~~~~~~~d~~~le~~l~~~~~~~~~ 180 (407)
T PRK09064 121 ATLSTLAKL-IPDCVIFSDELNHASMIEGIRRSRC-------------------EKHIFRHNDVAHLEELLAAADPDRPK 180 (407)
T ss_pred HHHHHHhCC-CCCCEEEEeCcchHHHHHHHHHcCC-------------------cEEEECCCCHHHHHHHHHhccCCCCe
Confidence 999975433 3456777776667754433332221 245667889999999987542 4678
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--ccCCCccccccCC--CCcee--ehhhhcCCCcc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGGLP 321 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~--~pdi~--t~sK~l~~G~~ 321 (474)
+|++|++++++|.+.| +++|+++|++||++||+||+|+ |+ +.|..+ .++.++ .+|++ ||||++|. .
T Consensus 181 ~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~--~ 253 (407)
T PRK09064 181 LIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGV--M 253 (407)
T ss_pred EEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhc--c
Confidence 9999999999999998 9999999999999999999996 64 445433 456665 46777 89999973 2
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeee
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (474)
.||+++++++++.+......+. .+.+.+|.++++++++|+.+++. ...++++++++++++.|+++. +.+ +.+.
T Consensus 254 GG~~~~~~~~~~~l~~~~~~~~-~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~---~~~~ 327 (407)
T PRK09064 254 GGYIAGSAALVDAVRSYAPGFI-FTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAG--IPV---MPNE 327 (407)
T ss_pred CceEecCHHHHHHHHHhCcccc-ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC--CCC---CCCC
Confidence 3788899999988764322222 25578899999999999988763 346788889999999988752 221 2234
Q ss_pred ceeEEEEEecCCCcCcccccccchHHHHHHHHHHHH-CCeEecccCC-------cceEE--ecCCcHHHHHHHHHHHHHH
Q 011959 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~-------~~~~~--~~~~t~e~i~~~l~~l~~~ 470 (474)
+.++.+.+.+ .....++.+.|++ +||++.+..+ ..+|+ ++.+|++|+++++++|+++
T Consensus 328 ~~iv~i~~~~-------------~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 328 SHIVPVMVGD-------------PEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred CCEEEEEeCC-------------HHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5666555421 1234678888875 5999976422 34565 4778999999999999998
Q ss_pred Hhh
Q 011959 471 LRQ 473 (474)
Q Consensus 471 ~~~ 473 (474)
+++
T Consensus 395 ~~~ 397 (407)
T PRK09064 395 WAR 397 (407)
T ss_pred HHH
Confidence 865
No 94
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=9.4e-33 Score=275.86 Aligned_cols=330 Identities=16% Similarity=0.200 Sum_probs=236.7
Q ss_pred EeccCChhhccCCC-CCHHHHHHHHHHHHh-cCC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHH
Q 011959 102 IDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLR 173 (474)
Q Consensus 102 iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~-~~~------~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~ 173 (474)
|||.++ +|||. .||++++++.+++++ +.+ +++......+|.+++++++ +.+..++++||+.|+..++.
T Consensus 1 ~~f~s~---dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~-g~e~al~~~sG~~a~~~~i~ 76 (392)
T PLN03227 1 LNFATH---DFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL-GTESAILYSDGASTTSSTVA 76 (392)
T ss_pred CCCcCc---CccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh-CCCcEEEecCcHHHHHHHHH
Confidence 578888 99999 599999999999987 322 2223457788999999888 45678888889999998887
Q ss_pred HhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC----------
Q 011959 174 LARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---------- 243 (474)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~---------- 243 (474)
.+.++++.|+.+...|+.....+...+ ..+..++++|++++++.++..
T Consensus 77 ---~l~~~GD~Vl~~~~~h~s~~~~~~l~~-------------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~ 134 (392)
T PLN03227 77 ---AFAKRGDLLVVDRGVNEALLVGVSLSR-------------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKRK 134 (392)
T ss_pred ---HhCCCCCEEEEeccccHHHHHHHHHcC-------------------CeEEEeCCCCHHHHHHHHHHhhhhccccccc
Confidence 345555555555555554433322211 135667888888887765431
Q ss_pred -CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C-c-ccCCCccccccCCCC----ceeehh--
Q 011959 244 -KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G-F-RLAYGGAQEYFGVTP----DLTTLG-- 313 (474)
Q Consensus 244 -~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~-r~g~~~~~~~~g~~p----di~t~s-- 313 (474)
..+++.|++||+++++|.+.| +++|+++|++||++||+||+|+ | + ++|. +..+++|+.| |++++|
T Consensus 135 ~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~sls 209 (392)
T PLN03227 135 PTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLE 209 (392)
T ss_pred cCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeech
Confidence 135789999999999999999 9999999999999999999995 2 2 3444 6788999998 988654
Q ss_pred hhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCC--hHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhhh
Q 011959 314 KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN--PLAMTAGIHTLKR-LKEPGTYEYLNKITGELTQGIIDAGKK 390 (474)
Q Consensus 314 K~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~--~~~~aaa~aal~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~ 390 (474)
|++ |++.|++++++++++.++. ..+..+|+++ |+.+++++++++. ++++++++++++++++++++|++. .
T Consensus 210 k~~--g~~gg~v~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~--~ 282 (392)
T PLN03227 210 NAF--GSVGGMTVGSEEVVDHQRL---SGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS--S 282 (392)
T ss_pred hhh--hccCcEEecCHHHHHHHHH---hCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--C
Confidence 554 3456778899999887752 2345567765 7788888877755 444789999999999999999873 4
Q ss_pred cCCeeEEeee--------ceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-----------cceE-
Q 011959 391 AGHAICGGYI--------SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------EAGF- 450 (474)
Q Consensus 391 ~~~~~~v~~~--------g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----------~~~~- 450 (474)
++.+.++++. |+++++++.+.+... ...+......+.+.|+++|+++.+.+. ..+|
T Consensus 283 ~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~ 358 (392)
T PLN03227 283 HPYALKLRNRLVITSDPISPIIYLRLSDQEATR----RTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRV 358 (392)
T ss_pred CccccccccccccCCCCCCCEEEEEeCCHHHhh----hhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEE
Confidence 5556666653 557888884321100 001112346889999999999864321 1223
Q ss_pred -EecCCcHHHHHHHHHHHHHHHhh
Q 011959 451 -TSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 451 -~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
++..||+||||+++++|++++++
T Consensus 359 ~~~~~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 359 VANASHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred EecCCCCHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999875
No 95
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=8.8e-32 Score=270.21 Aligned_cols=336 Identities=21% Similarity=0.270 Sum_probs=245.1
Q ss_pred eEEEeeccCEEEEcCCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhcC-CC------CCCCHHHHHHHHHHHhhCCC
Q 011959 83 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGT-SF------GAPCLLENVLAEMVISAVPS 154 (474)
Q Consensus 83 ~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~-~~------~~~~~~~~~la~~l~~~~~~ 154 (474)
.++.+++|+++|+ +|++|||+.++ .++|| ++|+|++++.+++.+.. .. .+......+++++++++++
T Consensus 24 ~~~~~~~g~~~~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~- 98 (385)
T PRK05958 24 RPREGGAGRWLVV-DGRRMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG- 98 (385)
T ss_pred cccccCCCceeEe-CCceEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-
Confidence 3579999999997 99999999998 67898 78999999999997621 11 1346678899999999884
Q ss_pred CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHH
Q 011959 155 IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVS 234 (474)
Q Consensus 155 ~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~ 234 (474)
.+.++++++|++++..+++ .+.++++.|++...+|+.....+...|. ++..++.+|++
T Consensus 99 ~~~~i~~~~g~~~~~~~l~---~~~~~gd~V~~~~~~~~~~~~~~~~~g~-------------------~~~~~~~~d~~ 156 (385)
T PRK05958 99 AERALLFSSGYAANLAVLT---ALAGKGDLIVSDKLNHASLIDGARLSRA-------------------RVRRYPHNDVD 156 (385)
T ss_pred CCcEEEECcHHHHHHHHHH---HhCCCCCEEEEeCccCHHHHHHHHhcCC-------------------ceEEeCCCCHH
Confidence 5677888889999998877 4455555555666777766555444332 23445666899
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--ccCCCccccccC--CCCc-
Q 011959 235 ALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFG--VTPD- 308 (474)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g--~~pd- 308 (474)
++++.++..++++++++++++++++|.+.+ +++|+++|++||++||+||+|. |+ +.|... ...++ ..+|
T Consensus 157 ~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~~~ 231 (385)
T PRK05958 157 ALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGL-AAEAGLAGEPDV 231 (385)
T ss_pred HHHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCch-HHhhCCCCCCce
Confidence 999999754335788899999999998888 9999999999999999999995 43 233222 22222 3456
Q ss_pred --eeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHH
Q 011959 309 --LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGII 385 (474)
Q Consensus 309 --i~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~ 385 (474)
+.++||++++ +.||+++++++++.+......+ ..+.+.+++.++++.++|+.+++ +.+.+++.++++++.+.|+
T Consensus 232 i~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~ 308 (385)
T PRK05958 232 ILVGTLGKALGS--SGAAVLGSETLIDYLINRARPF-IFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLR 308 (385)
T ss_pred EEEEechhhccc--CCcEEEcCHHHHHHHHHhCccc-eecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 4589999974 3488899999988775322222 23446788888888899988766 3677888888899988888
Q ss_pred HHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-------CcceEEec--CCc
Q 011959 386 DAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTSL--AHS 456 (474)
Q Consensus 386 ~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~~~~--~~t 456 (474)
+.. +. .+++.|.++++.+.+ .....++.+.|.++||.+.+.. ...+|++. .++
T Consensus 309 ~~~----~~-~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~ 370 (385)
T PRK05958 309 ALG----FQ-LMDSQSAIQPLIVGD-------------NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHT 370 (385)
T ss_pred HcC----CC-cCCCCCCEEEEEeCC-------------HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCC
Confidence 752 21 134567777776631 1234578899999999997632 23567754 479
Q ss_pred HHHHHHHHHHHHHHH
Q 011959 457 SDDIQHTITAAEKVL 471 (474)
Q Consensus 457 ~e~i~~~l~~l~~~~ 471 (474)
++++++++++|++++
T Consensus 371 ~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 371 EADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998763
No 96
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-31 Score=267.69 Aligned_cols=331 Identities=18% Similarity=0.200 Sum_probs=237.3
Q ss_pred CCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CC------CCCCCHHHHHHHHHHHhhC
Q 011959 80 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TS------FGAPCLLENVLAEMVISAV 152 (474)
Q Consensus 80 ~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~------~~~~~~~~~~la~~l~~~~ 152 (474)
+.+++..++.|.++||.+||+||||. +||+|++++.+++++. .. +....+...+|.+.|++++
T Consensus 43 ~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~ 112 (407)
T PRK07179 43 GKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT 112 (407)
T ss_pred CceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh
Confidence 35888999999999999999999987 6899999999999762 11 1112356788889999888
Q ss_pred CCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCC
Q 011959 153 PSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (474)
Q Consensus 153 ~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 232 (474)
+.+.+++++||++|++.+++. +..+++.++.+...|......+...| .++..++++|
T Consensus 113 -g~~~~~~~~sG~~An~~~l~~---l~~~g~~v~~~~~~h~s~~~~~~~~g-------------------~~~~~~~~~d 169 (407)
T PRK07179 113 -GFESCLLCQSGWAANVGLLQT---IADPNTPVYIDFFAHMSLWEGVRAAG-------------------AQAHPFRHND 169 (407)
T ss_pred -CCCcEEEECCHHHHHHHHHHH---hCCCCCEEEEECCcCHHHHHHHHHCC-------------------CeEEEecCCC
Confidence 456789999999999999994 33333444445555543332222111 1345666789
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC-c--ccCCCccccccCCC--C
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG-F--RLAYGGAQEYFGVT--P 307 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g-~--r~g~~~~~~~~g~~--p 307 (474)
+++|++.++++ ++++|+++++++++|.+.| +++|+++|++||++||+||+|+. . ++|.. ....+++. +
T Consensus 170 ~~~l~~~l~~~--~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g-~~~~~~~~~~v 242 (407)
T PRK07179 170 VDHLRRQIERH--GPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAG-LVAELGLTSRV 242 (407)
T ss_pred HHHHHHHHHhc--CCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCc-hHHhcCCCCCC
Confidence 99999999743 4688999999999999999 99999999999999999999963 2 23322 24456664 3
Q ss_pred cee--ehhhhcCCCcceEEEEecHHHHHhhcCCCC-cccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHH
Q 011959 308 DLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGP-MYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQG 383 (474)
Q Consensus 308 di~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~-~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~ 383 (474)
|++ +++|++++ |+|++++++++++.+..... ..+.+| .++..++++.++++.+.+ +..+++++++++++++.
T Consensus 243 di~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~~~~t--~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~ 318 (407)
T PRK07179 243 HFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAIFSST--LLPHEIAGLEATLEVIESADDRRARLHANARFLREG 318 (407)
T ss_pred CEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCeeeCCC--CCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 775 58999975 79999999998887753221 122233 245556666778887765 45788899999999999
Q ss_pred HHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEec----cc---CCcceEEe--cC
Q 011959 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA----PS---QFEAGFTS--LA 454 (474)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~---~~~~~~~~--~~ 454 (474)
|+++ ++ .+.+.+.++++.+.. ......+.+.|.++||++. |. +...+|++ ..
T Consensus 319 L~~~----g~--~v~~~~~i~~l~~~~-------------~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~ 379 (407)
T PRK07179 319 LSEL----GY--NIRSESQIIALETGS-------------ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNAD 379 (407)
T ss_pred HHHc----CC--CCCCCCCEEEEEeCC-------------HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCC
Confidence 9875 22 223557777776532 1223567788999999733 32 12356664 56
Q ss_pred CcHHHHHHHHHHHHHHHhh
Q 011959 455 HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 455 ~t~e~i~~~l~~l~~~~~~ 473 (474)
+|++|+++++++|++++++
T Consensus 380 ~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 380 LTASDLDRVLEVCREARDE 398 (407)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 8999999999999998765
No 97
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=3.6e-31 Score=265.76 Aligned_cols=339 Identities=19% Similarity=0.263 Sum_probs=242.2
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhc-CC---C---CCCCHHHHHHHHHHHhhCC
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TS---F---GAPCLLENVLAEMVISAVP 153 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~-~~---~---~~~~~~~~~la~~l~~~~~ 153 (474)
|.++.+++|+|+| .||++||||.++ +++|| ++|.+++++.+++.+. .. + .+..+++.++++++++.++
T Consensus 17 ~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g 92 (385)
T TIGR01825 17 IRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK 92 (385)
T ss_pred ccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC
Confidence 7889999999999 999999999987 77999 7999999999998752 21 1 1346788999999998885
Q ss_pred CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCH
Q 011959 154 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (474)
Q Consensus 154 ~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~ 233 (474)
. +..++.+||++++..+++. +.+++++|+.+..+|+.....+...+. +...+++.|+
T Consensus 93 ~-~~~i~~~sG~~a~~~a~~~---~~~~gd~vi~~~~~~~~~~~~~~~~g~-------------------~~~~~~~~d~ 149 (385)
T TIGR01825 93 T-EAALVFQSGFNTNQGVLSA---LLRKGDIVLSDELNHASIIDGLRLTKA-------------------TKKIYKHADM 149 (385)
T ss_pred C-CcEEEECcHHHHHHHHHHH---hCCCCCEEEEEccccHHHHHHHHhcCC-------------------ceEEeCCCCH
Confidence 4 4556677889999988884 334444555666677655444433332 1223345588
Q ss_pred HHHHHHHhcCC-CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc---ccCCCccccccCCCCc-
Q 011959 234 SALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPD- 308 (474)
Q Consensus 234 ~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~---r~g~~~~~~~~g~~pd- 308 (474)
+++++.+++.. +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|..+ +.+. +...++++.+|
T Consensus 150 ~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~ 224 (385)
T TIGR01825 150 DDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGR-GTVHHFGLEDKV 224 (385)
T ss_pred HHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-ccHhhcCCCcCC
Confidence 99998887543 35789999999999999888 999999999999999999999543 2332 23344555444
Q ss_pred ---eeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHH
Q 011959 309 ---LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGI 384 (474)
Q Consensus 309 ---i~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L 384 (474)
+.+|||++++ +.||+++++++++.+......+.. +...++..++++.++|+.+.+ .+..+++.++++++.+.|
T Consensus 225 ~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L 301 (385)
T TIGR01825 225 DIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLF-STAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGL 301 (385)
T ss_pred cEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccc-cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 3589999963 458899999998888632221222 223567888888999987654 467888888899999988
Q ss_pred HHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEeccc-------CCcceEE--ecCC
Q 011959 385 IDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS-------QFEAGFT--SLAH 455 (474)
Q Consensus 385 ~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------~~~~~~~--~~~~ 455 (474)
+++. ..+ ....+.++.+.+.. ......+++.|+++||++.+. +...+|+ ++.+
T Consensus 302 ~~~g--~~~---~~~~~~~~~~~~~~-------------~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~ 363 (385)
T TIGR01825 302 GKLG--YDT---GGSETPITPVVIGD-------------EKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEH 363 (385)
T ss_pred HHcC--CCC---CCCCCCEEEEEECC-------------HHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCC
Confidence 7752 221 12233444444321 122357889999999998543 2234555 4689
Q ss_pred cHHHHHHHHHHHHHHHhh
Q 011959 456 SSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 456 t~e~i~~~l~~l~~~~~~ 473 (474)
+++++++++++|++++++
T Consensus 364 ~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 364 TKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998865
No 98
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=9.5e-31 Score=263.37 Aligned_cols=342 Identities=21% Similarity=0.271 Sum_probs=241.3
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCC-CHHHHHHHHHHHHh-cCCCC------CCCHHHHHHHHHHHhhCC
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHA-DDQVLAALGETMKK-GTSFG------APCLLENVLAEMVISAVP 153 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~-~p~v~~a~~~~~~~-~~~~~------~~~~~~~~la~~l~~~~~ 153 (474)
|.++.+++|.++++.+|++||||.++ ++||++ +|++++++.+++.+ +..++ +..+...+|.+.+++++
T Consensus 21 ~~~~~~~~~~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~- 96 (393)
T TIGR01822 21 ERIITSPQGADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFL- 96 (393)
T ss_pred ccccccCCCceEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh-
Confidence 66788999999999899999999999 899996 99999999999977 33221 22455678888888888
Q ss_pred CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCH
Q 011959 154 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (474)
Q Consensus 154 ~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~ 233 (474)
+.+.+++++||++|+..++.. ...+++.|++.++.| ......+...+. ..+.++++|+
T Consensus 97 g~~~~ii~~~~~~a~~~~~~~--l~~~gd~vi~~~~~~-~s~~~~~~~~~~-------------------~~~~~~~~d~ 154 (393)
T TIGR01822 97 GTEDTILYASCFDANGGLFET--LLGAEDAIISDALNH-ASIIDGVRLCKA-------------------KRYRYANNDM 154 (393)
T ss_pred CCCcEEEECchHHHHHHHHHH--hCCCCCEEEEecccc-HHHHHHHHhcCC-------------------ceEEeCCCCH
Confidence 456788889999999988773 233455666655444 433333222221 1234456799
Q ss_pred HHHHHHHhcC---CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCC--C
Q 011959 234 SALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGV--T 306 (474)
Q Consensus 234 ~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~--~ 306 (474)
++|++.+++. +.++++|+++++++++|.+.+ +++|.++|++||++||+||+| .|+ .....+..+..++ .
T Consensus 155 ~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~ 230 (393)
T TIGR01822 155 ADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGR 230 (393)
T ss_pred HHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCC
Confidence 9999988752 226788999999999999988 999999999999999999999 455 2211122334444 3
Q ss_pred Ccee--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHH
Q 011959 307 PDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQG 383 (474)
Q Consensus 307 pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~ 383 (474)
+|++ ++||+++ |+|+||+++++++++.+......+.. +.+.++..++++.++|+.++. ++..++++++.+++++.
T Consensus 231 ~di~~~s~sK~l~-g~r~G~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 308 (393)
T TIGR01822 231 VDIITGTLGKALG-GASGGFTTARKEVVELLRQRSRPYLF-SNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRER 308 (393)
T ss_pred CeEEEEEChHHhh-CCCcEEEEeCHHHHHHHHHhCcccee-cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 5666 7999987 57999999999999888642222211 223456667778888887754 56778888999999988
Q ss_pred HHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-------CcceEE--ecC
Q 011959 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFT--SLA 454 (474)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~~--~~~ 454 (474)
|++.. ..+ ..+.+.++.+.+. +.....++++.|+++||++.... ...+|+ +..
T Consensus 309 L~~~g--~~~---~~~~~~~~~i~~~-------------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~ 370 (393)
T TIGR01822 309 MEAAG--FDI---KPADHPIIPVMLY-------------DAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAA 370 (393)
T ss_pred HHHcC--CCC---CCCCCCEEEEEeC-------------CHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCC
Confidence 87642 111 1223444444432 11234678899999999987432 123454 578
Q ss_pred CcHHHHHHHHHHHHHHHhh
Q 011959 455 HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 455 ~t~e~i~~~l~~l~~~~~~ 473 (474)
+|++||++++++|++++++
T Consensus 371 ~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 371 HTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 8999999999999998765
No 99
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=9.5e-31 Score=263.81 Aligned_cols=341 Identities=23% Similarity=0.271 Sum_probs=240.0
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhc-CCC------CCCCHHHHHHHHHHHhhCC
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVP 153 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~-~~~------~~~~~~~~~la~~l~~~~~ 153 (474)
+..+++++|.++||.+|++||||.++ +++|+ .+|++.+++.+++.+. ..+ .+..+++.+++++++++++
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g 101 (397)
T PRK06939 25 ERVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG 101 (397)
T ss_pred cccccCCCCceEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC
Confidence 34678999999999999999999987 77899 6999999999998762 211 1345778899999999885
Q ss_pred CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCH
Q 011959 154 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (474)
Q Consensus 154 ~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~ 233 (474)
.. +.+++++|++++..+++. ....++.||+.++.|.+.. ..+...+. +++.++++|+
T Consensus 102 ~~-~~i~~tsG~~a~~~~~~~--l~~~gd~vi~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~~d~ 158 (397)
T PRK06939 102 TE-DAILYSSCFDANGGLFET--LLGKEDAIISDALNHASII-DGVRLCKA-------------------KRYRYANNDM 158 (397)
T ss_pred CC-cEEEEcChHHHHHHHHHH--hCCCCCEEEEEhhhhHHHH-HHHHhcCC-------------------ceEEeCCCCH
Confidence 43 445556679999999874 2344566777666665432 22222221 2344555689
Q ss_pred HHHHHHHhcC---CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc-c-cCCCccccccCC--
Q 011959 234 SALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGGAQEYFGV-- 305 (474)
Q Consensus 234 ~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~-r-~g~~~~~~~~g~-- 305 (474)
+++++.+++. ..++++|+++++++++|.+.+ +++|.++|++||++||+||+|. |+ . .+. +....+++
T Consensus 159 ~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~-~~~~~~~~~~ 233 (397)
T PRK06939 159 ADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGR-GTVEHFGVMD 233 (397)
T ss_pred HHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-CHHHHcCCCC
Confidence 9999888742 226788888889999998776 9999999999999999999994 55 2 222 23334455
Q ss_pred CCcee--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHH
Q 011959 306 TPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQ 382 (474)
Q Consensus 306 ~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~ 382 (474)
.+|++ ++||+++ |+|+||+++++++++.+......+.. +.+.++..++++.++++.+.+ +++.++++++.+++++
T Consensus 234 ~~~i~~~S~sK~~~-g~r~G~v~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~ 311 (397)
T PRK06939 234 RVDIITGTLGKALG-GASGGYTAGRKEVIDWLRQRSRPYLF-SNSLAPAIVAASIKVLELLEESDELRDRLWENARYFRE 311 (397)
T ss_pred CCcEEEEECHHHhC-ccCceEEEeCHHHHHHHHHhCccccc-cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 34666 8999996 45999999999999888642111111 223456667778888887755 4677888888888888
Q ss_pred HHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-------CcceEEe--c
Q 011959 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTS--L 453 (474)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~~~--~ 453 (474)
.|++.. ... ..+.+.++.+.+. +.....++++.|+++||.+.+.. ...+|++ .
T Consensus 312 ~L~~~~--~~~---~~~~~~~~~~~~~-------------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~ 373 (397)
T PRK06939 312 GMTAAG--FTL---GPGEHPIIPVMLG-------------DAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSA 373 (397)
T ss_pred HHHHcC--CCc---CCCCCCEEEEEEC-------------CHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECC
Confidence 887652 111 2234555544332 11234678999999999887532 1345654 5
Q ss_pred CCcHHHHHHHHHHHHHHHhh
Q 011959 454 AHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 454 ~~t~e~i~~~l~~l~~~~~~ 473 (474)
.++++++++++++|++++++
T Consensus 374 ~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 374 AHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 68999999999999999875
No 100
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=4e-30 Score=259.88 Aligned_cols=327 Identities=18% Similarity=0.217 Sum_probs=233.9
Q ss_pred CCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhc-CC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 168 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~-~~------~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~ 168 (474)
+|+++++|.++ +++|. +||+|++++.+++++. .. +....+...+|.++++++++ .+..++++||++|+
T Consensus 44 ~~~~~~~~~sn---~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-~~~~i~~~sG~~a~ 119 (410)
T PRK13392 44 GPRRVTIWCSN---DYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-KESALLFTSGYVSN 119 (410)
T ss_pred CCceEEEEECC---CccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-CCCEEEECcHHHHH
Confidence 57899999998 99999 5999999999999873 21 11234457899999999996 46677888899999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC-CCe
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEI 247 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~ 247 (474)
+.+++...... ++++|+.+..+|+.....+...|. ++..++++|.+++++.++... +++
T Consensus 120 ~~~i~~l~~~~-~g~~vi~~~~~h~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~t 179 (410)
T PRK13392 120 DAALSTLGKLL-PGCVILSDALNHASMIEGIRRSGA-------------------EKQVFRHNDLADLEEQLASVDPDRP 179 (410)
T ss_pred HHHHHHHhcCC-CCCEEEEehhhhHHHHHHHHHcCC-------------------eEEEEeCCCHHHHHHHHHhccCCCC
Confidence 99998431111 235666677788765444433332 234456778888888886532 467
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--ccCCCccccccCC--CCcee--ehhhhcCCCc
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGGL 320 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~--~pdi~--t~sK~l~~G~ 320 (474)
++|++++++|++|.+.+ +++|.++|++||++||+||+|+ |+ ..|.. ..++.++ .+|++ ||||++|.
T Consensus 180 ~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g-~~~~~~~~~~~div~~tlsK~~g~-- 252 (410)
T PRK13392 180 KLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGG-IAERDGLMDRIDMIQGTLAKAFGC-- 252 (410)
T ss_pred EEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCc-hhhhccCCCCCcEEEEEChHhhhc--
Confidence 89999999999999998 9999999999999999999996 65 33322 2344444 35666 89999983
Q ss_pred ceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 321 ~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
+.||+++++++++.++.....+.+ +.+.+|++++++.++|+.++. ....++++++.+++++.|+++. +.+ .++
T Consensus 253 ~GG~~~~~~~~~~~l~~~~~~~~~-s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~---~~~ 326 (410)
T PRK13392 253 LGGYIAASADLIDFVRSFAPGFIF-TTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG--IPV---MPS 326 (410)
T ss_pred ccchhhcCHHHHHHHHHhCcchhc-cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC--CCC---CCC
Confidence 237888899999977643333333 456678889999999998765 3455667888888888887652 221 134
Q ss_pred eceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccCC-------cceEEe--cCCcHHHHHHHHHHHHH
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-------EAGFTS--LAHSSDDIQHTITAAEK 469 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~-------~~~~~~--~~~t~e~i~~~l~~l~~ 469 (474)
.+.++.+.+. +.....++.+.|+ ++||++.+..+ ..+|++ +.+|++|+++++++|++
T Consensus 327 ~~~~~~i~~~-------------~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 327 PSHIVPVMVG-------------DPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred CCCEEEEEeC-------------CHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 5555555442 1123457888887 67999987532 345664 57999999999999999
Q ss_pred HHhh
Q 011959 470 VLRQ 473 (474)
Q Consensus 470 ~~~~ 473 (474)
++++
T Consensus 394 ~~~~ 397 (410)
T PRK13392 394 IWDR 397 (410)
T ss_pred HHHH
Confidence 8765
No 101
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.98 E-value=2.5e-30 Score=231.51 Aligned_cols=336 Identities=21% Similarity=0.258 Sum_probs=253.1
Q ss_pred CeEEEeeccCEEEEcCC--CEEEeccCChhhccCCC-CCHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhh
Q 011959 82 PIVFDSVKGSHMWDIDG--NEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISA 151 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG--~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~-~~~~------~~~~~~~~~la~~l~~~ 151 (474)
-.++.+.+|..+. ++| +++|+|++| ||||. +||+|++|-.+++++ +... .+.......|..+++++
T Consensus 49 erVi~s~q~p~i~-v~G~~k~ilnFcaN---nYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf 124 (417)
T KOG1359|consen 49 ERVITSRQGPTIQ-VKGSDKKILNFCAN---NYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF 124 (417)
T ss_pred eeEEeecccceEE-Eeccccceeeeccc---ccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH
Confidence 3578889999886 666 579999999 99999 699999999999987 3211 13577888999999988
Q ss_pred CCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC
Q 011959 152 VPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231 (474)
Q Consensus 152 ~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 231 (474)
+ +.|+.++.+|+..||..++. +...+.+-|..|.-.|.+....+.+. .++.+-
T Consensus 125 h-~rED~ilypscfdANag~fe---ail~pedAvfSDeLNhASIIdGirLc-----------------------kry~h~ 177 (417)
T KOG1359|consen 125 H-GREDTILYPSCFDANAGAFE---AILTPEDAVFSDELNHASIIDGIRLC-----------------------KRYRHV 177 (417)
T ss_pred h-CCCceEEeccccccchHHHH---HhcChhhhhhccccccchhhhhhHHH-----------------------hhhccc
Confidence 8 77889999999999999988 44455555666777787543322211 123344
Q ss_pred CHHHHHHHHhc-CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCC--C
Q 011959 232 DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGV--T 306 (474)
Q Consensus 232 d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~--~ 306 (474)
|+-+++..+.+ .+-+.++|+.+.++++.|.+.| |++|.+|++|||.+|++||.| ||| .....+..+.+|+ .
T Consensus 178 dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~ 253 (417)
T KOG1359|consen 178 DVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGD 253 (417)
T ss_pred hhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCc
Confidence 77777765553 2346889999999999999999 999999999999999999999 888 5545677788886 4
Q ss_pred Ccee--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHH
Q 011959 307 PDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQG 383 (474)
Q Consensus 307 pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~ 383 (474)
+|++ |+||++|| ---||..+++.+++.++...+.+.+++ +.+|.....+.++++.+.. .....+.+.+.+++++.
T Consensus 254 vdiinsTLgKAlGg-a~GGyttgp~~li~llrqr~RpylFSn-slppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~ 331 (417)
T KOG1359|consen 254 VDIINSTLGKALGG-ASGGYTTGPKPLISLLRQRSRPYLFSN-SLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREF 331 (417)
T ss_pred ceehhhhhhhhhcC-CCCCCccCChhHHHHHHhcCCceeecC-CCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 6666 89999983 246778999999999987666666654 5555555566667776544 67888889999999988
Q ss_pred HHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcc-------e--EEecC
Q 011959 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------G--FTSLA 454 (474)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~-------~--~~~~~ 454 (474)
++..+. .+... ..++.+....|...+..+.+.|+++|+++....++. + .++..
T Consensus 332 me~aGf-----------------tIsg~-~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAa 393 (417)
T KOG1359|consen 332 MEAAGF-----------------TISGA-SHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAA 393 (417)
T ss_pred HHhcCc-----------------eecCC-CCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehh
Confidence 876522 22111 123334445677888899999999999987765543 2 35899
Q ss_pred CcHHHHHHHHHHHHHHHh
Q 011959 455 HSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 455 ~t~e~i~~~l~~l~~~~~ 472 (474)
||+||||++++++.++.+
T Consensus 394 Ht~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 394 HTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred cCHHHHHHHHHHHHHHHH
Confidence 999999999999998865
No 102
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=8e-30 Score=253.27 Aligned_cols=334 Identities=18% Similarity=0.197 Sum_probs=236.9
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCCe-EEEeCCHHHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEM-VRFVNSGTEACMG 170 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~---~~~~~~~~la~~l~~~~~---~~~~-v~~~~sGseA~~~ 170 (474)
.++||+..| .+.-..++.+++++.+++..+. .|+ +..++++.+++++.++++ .++. |++|+|+++|+..
T Consensus 28 ~~vi~l~iG---~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIG---EPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCC---CCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 467888888 6655678999999999998763 332 345778888888888865 3444 9999999999999
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCC-CCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (474)
++.. ...++++||+.+|.|..+........|..+ ..+.... .++. -|+++|++.++. ++++
T Consensus 105 ~~~a--~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v-~v~l~~~~~~f~------------~d~~~l~~~i~~---ktk~ 166 (393)
T COG0436 105 AFLA--LLNPGDEVLIPDPGYPSYEAAVKLAGGKPV-PVPLDEEENGFK------------PDLEDLEAAITP---KTKA 166 (393)
T ss_pred HHHH--hcCCCCEEEEeCCCCcCHHHHHHhcCCEEE-EEeCCcCccCCc------------CCHHHHHhhcCc---cceE
Confidence 9984 345668899999999876544444434322 2111000 1110 189999999884 6889
Q ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC-C-ccccccCC---CCceeehhhhcC-CCcce
Q 011959 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-G-GAQEYFGV---TPDLTTLGKIIG-GGLPV 322 (474)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~-~~~~~~g~---~pdi~t~sK~l~-~G~~i 322 (474)
|+++.++|++|.+.++++ +++|.++|++||++||+||+|.+| ..+. + ...+..+. ..-+-+|||.++ .|||+
T Consensus 167 i~ln~P~NPTGav~~~~~-l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRv 245 (393)
T COG0436 167 IILNSPNNPTGAVYSKEE-LKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRI 245 (393)
T ss_pred EEEeCCCCCcCcCCCHHH-HHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccce
Confidence 999998899998887655 999999999999999999999999 7763 2 22222221 111237999999 89999
Q ss_pred EEEEec-HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEE
Q 011959 323 GAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (474)
Q Consensus 323 G~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (474)
||++++ +++++.+. ......+++.+.++|.++.++|+.-++ +...+.++++++.+.+.|.++. ++....
T Consensus 246 G~~v~~~~~l~~~~~---~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~---g~~~~~ 319 (393)
T COG0436 246 GWVVGPPEELIAALR---KLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIG---GLSVVK 319 (393)
T ss_pred eEeecChHHHHHHHH---HHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcC---Ceeecc
Confidence 999999 88888776 344566778999999999999985422 2233456666666666666542 133233
Q ss_pred eeecee-EEEEEecCCCcCcccccccchHHHHHHHHHHHH-CCeEecccC-------CcceEEecCCcHHHHHHHHHHHH
Q 011959 398 GYISGM-FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAE 468 (474)
Q Consensus 398 ~~~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~-------~~~~~~~~~~t~e~i~~~l~~l~ 468 (474)
...|.| ++..+... ....+|+..|++ .||.+.|+. .+++|+++..+++++++++++++
T Consensus 320 ~p~Ga~Y~~~~i~~~-------------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~ 386 (393)
T COG0436 320 PPEGAFYLFPKIPEL-------------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLA 386 (393)
T ss_pred CCCeeEEEEeecCCC-------------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHH
Confidence 244444 44444321 112577777775 589999862 24689999999999999999999
Q ss_pred HHHhh
Q 011959 469 KVLRQ 473 (474)
Q Consensus 469 ~~~~~ 473 (474)
++++.
T Consensus 387 ~~~~~ 391 (393)
T COG0436 387 RFLAE 391 (393)
T ss_pred HHHHh
Confidence 98865
No 103
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=5.2e-29 Score=247.76 Aligned_cols=332 Identities=20% Similarity=0.269 Sum_probs=232.4
Q ss_pred EEeeccCEEEEcCCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCC
Q 011959 85 FDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIE 156 (474)
Q Consensus 85 ~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~-~~~~------~~~~~~~~~la~~l~~~~~~~~ 156 (474)
++++.|.++. .+|++||||.+| +++|+ .+|++++++.+++.+ +..+ .+..+...++++.++++++ .+
T Consensus 3 ~~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-~~ 77 (360)
T TIGR00858 3 LDRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-TE 77 (360)
T ss_pred cccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-CC
Confidence 4688999997 899999999998 78996 789999999999876 2211 1224667888999998885 34
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHH
Q 011959 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 236 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l 236 (474)
..+++++|++++..+++. ...+++.|++ ...+|+.....+...|. ++..++..|++++
T Consensus 78 ~~i~~~~G~~~~~~~l~~--~~~~gd~v~~-~~~~~~~~~~~~~~~g~-------------------~~~~~~~~d~~~l 135 (360)
T TIGR00858 78 AALLFSSGYLANVGVISA--LVGKGDLILS-DALNHASLIDGCRLSGA-------------------RVRRYRHNDVEHL 135 (360)
T ss_pred CEEEECchHHHHHHHHHH--hCCCCCEEEE-EccccHHHHHHHHhcCC-------------------ceEEecCCCHHHH
Confidence 566667789998887773 2233445554 45555544444433332 2334455689999
Q ss_pred HHHHhcCC-CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccC-C-CccccccCCCCc-----
Q 011959 237 ENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-Y-GGAQEYFGVTPD----- 308 (474)
Q Consensus 237 e~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g-~-~~~~~~~g~~pd----- 308 (474)
++.++++. .++++|+++++++++|.+.+ +++|.++|++||++||+||+|+.+..+ . .....++++.++
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 211 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQ 211 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEE
Confidence 99987643 35788889999888998888 999999999999999999999633221 1 222344555544
Q ss_pred eeehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHH
Q 011959 309 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDA 387 (474)
Q Consensus 309 i~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~ 387 (474)
+.++||++++ +.||+++++++++.+......+ ..+.+.++..++++.++++.+.. +...++++++.+++.+.|+++
T Consensus 212 i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 212 VGTLSKALGS--YGAYVAGSQALIDYLINRARTL-IFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred EEechhhhhc--cCcEEEcCHHHHHHHHHhCccc-eecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 4589999985 3489999999988775322211 12334567778888889987654 457788888888898888764
Q ss_pred hhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-------CcceEEec--CCcHH
Q 011959 388 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTSL--AHSSD 458 (474)
Q Consensus 388 ~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~~~~--~~t~e 458 (474)
++. ..+..+.++++.+.. .....++.+.|+++||++.+.. ...+|+++ .++++
T Consensus 289 ----~~~-~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~ 350 (360)
T TIGR00858 289 ----GFT-LMPSCTPIVPVIIGD-------------NASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPG 350 (360)
T ss_pred ----CCc-cCCCCCCEEEEEeCC-------------HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHH
Confidence 221 123456777777632 1223578899999999997531 23567754 46999
Q ss_pred HHHHHHHHHH
Q 011959 459 DIQHTITAAE 468 (474)
Q Consensus 459 ~i~~~l~~l~ 468 (474)
++++++++|+
T Consensus 351 ~i~~~l~~l~ 360 (360)
T TIGR00858 351 DIDRLAEALK 360 (360)
T ss_pred HHHHHHHhhC
Confidence 9999999873
No 104
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.97 E-value=3.5e-29 Score=232.72 Aligned_cols=352 Identities=17% Similarity=0.187 Sum_probs=257.1
Q ss_pred ccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHh-cCCC------CCCCHHHH
Q 011959 71 PVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLEN 142 (474)
Q Consensus 71 ~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~-~~~~------~~~~~~~~ 142 (474)
.+|.|+.+++..-.+.-++-. -+...+++--++++ +|||+ .||+|.+|+.+.+++ |... .+++....
T Consensus 145 sYRvFk~vNRlA~~fP~A~~~--se~t~k~VtVWCSN---DYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv 219 (570)
T KOG1360|consen 145 SYRVFKNVNRLAKEFPLAHRY--SEATEKKVTVWCSN---DYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHV 219 (570)
T ss_pred hhHHHHHHhHhhhhccchhhc--cccccCceEEEecC---ccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhh
Confidence 468887765532111111110 01112344445777 89999 599999999999988 3322 24577778
Q ss_pred HHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHH-hHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCC
Q 011959 143 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRL-ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGA 221 (474)
Q Consensus 143 ~la~~l~~~~~~~~~v~~~~sGseA~~~al~~-ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~ 221 (474)
+|.+.|++++ ..+..++++|+.-||+..|-. ++.+ ++.+|..|...|.+....+.. .
T Consensus 220 ~LE~eLA~LH-qK~aALlFsSCfVANDstLftLak~l--pgcei~SD~gNHASMI~GIrn-------------------s 277 (570)
T KOG1360|consen 220 RLEAELADLH-QKEAALLFSSCFVANDSTLFTLAKKL--PGCEIFSDEGNHASMIQGIRN-------------------S 277 (570)
T ss_pred hHHHHHHHHh-cCcceeeeeeeeeccchHHHHHHHHC--CCcEEeccccchHHHHHHhhh-------------------c
Confidence 8888888888 677888888999999998873 2222 467788888999865544332 2
Q ss_pred CCceEEccCCCHHHHHHHHhcCC-CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCc
Q 011959 222 TYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGG 298 (474)
Q Consensus 222 ~~~~~~~~~~d~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~ 298 (474)
....+.|.|||++.|+++|+..+ ..++.|-+|.++++.|.+.| |++|+++++|||++-.+|||| .|+ .....+
T Consensus 278 ~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHAVGlYG~rGaG 353 (570)
T KOG1360|consen 278 RVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHAVGLYGPRGAG 353 (570)
T ss_pred CCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhhhccccCCCCC
Confidence 23467889999999999998754 35677888999999999999 999999999999999999999 677 444455
Q ss_pred cccccCCC--Ccee--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC---CCHHH
Q 011959 299 AQEYFGVT--PDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYE 371 (474)
Q Consensus 299 ~~~~~g~~--pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~ 371 (474)
..++-|+. .||+ |++|+||+ -.||+.++..+++.++...+.+.++| +.+|..++.|+++++++.. ..++.
T Consensus 354 vgerdGvm~kvDiIsGTLgKafGc--VGGYIAat~~LvDmiRSyAaGFIFTT-SLPP~vl~GAleaVr~lk~~eg~~lR~ 430 (570)
T KOG1360|consen 354 VGERDGVMHKVDIISGTLGKAFGC--VGGYIAATRKLVDMIRSYAAGFIFTT-SLPPMVLAGALEAVRILKSEEGRVLRR 430 (570)
T ss_pred ccccCCcchhhhhcccchhhhccc--ccceehhhhhHHHHHHHhcCceEEec-CCChHHHHhHHHHHHHHhhhhhHHHHH
Confidence 66777774 5777 79999996 23566788899999997777777754 8899999999999998875 34566
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccCCcc--
Q 011959 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQFEA-- 448 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~-- 448 (474)
..+++.+++++.|.+++ +|++ +..+.+.+.+..+......+.+.|+ ++||++....++.
T Consensus 431 ~hqrnv~~~kq~l~~~G--iPVi----------------~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~ 492 (570)
T KOG1360|consen 431 QHQRNVKYVKQLLMELG--IPVI----------------PNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVA 492 (570)
T ss_pred HHHHHHHHHHHHHHHcC--Cccc----------------CCCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCccc
Confidence 66777788888777652 2221 1123334444556677778888887 6799998766554
Q ss_pred -----eEE--ecCCcHHHHHHHHHHHHHHHhhC
Q 011959 449 -----GFT--SLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 449 -----~~~--~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
+|+ ...||++.++.+++.+..+++++
T Consensus 493 rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 493 RGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred ccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 355 46789999999999999998763
No 105
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=1.6e-27 Score=244.01 Aligned_cols=364 Identities=18% Similarity=0.216 Sum_probs=240.4
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEE----EEcCCCEEEeccCChhhccCCCC--CHHHHHHHHH
Q 011959 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHM----WDIDGNEYIDYVGSWGPAIIGHA--DDQVLAALGE 126 (474)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~----~d~dG~~~iD~~~~~~~~~lG~~--~p~v~~a~~~ 126 (474)
.+.++.|.++.+...+.+.. +.+--+++|....+- ...++++.|||.++ +|||.+ ++.+.+++.+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~---~YLgl~~~~~~~~~~~~~ 126 (489)
T PLN02483 56 IRRLYLRIQDCFNRPIASAP------DAWFDVVERVSNDNNKTLKRTTKTRRCLNLGSY---NYLGFAAADEYCTPRVIE 126 (489)
T ss_pred HHHhhhhcccccCCCCCCCC------CCeEEEEEeecCCCCceEEecCCCceEEEeecC---CccCcCCCCHHHHHHHHH
Confidence 45556666665554433210 111124555444331 22467899999999 999995 5778888888
Q ss_pred HHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHH
Q 011959 127 TMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL 199 (474)
Q Consensus 127 ~~~~-~~~~------~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~ 199 (474)
++++ +... .++.....+|.+.++++++ .+..+++++|+.++..++.. +.++++.|+.+...|......+
T Consensus 127 ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~~ai~~~~G~~an~~~i~a---l~~~Gd~Vi~d~~~h~s~~~~~ 202 (489)
T PLN02483 127 SLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KPAAIVFGMGYATNSTIIPA---LIGKGGLIISDSLNHNSIVNGA 202 (489)
T ss_pred HHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CCcEEEECCHHHHHHHHHHH---hCCCCCEEEEcchhhHHHHHHH
Confidence 8776 3211 2357788899999999885 45566667799999887773 4444444445555555443333
Q ss_pred HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC----------CCCeEEEEEccccCCCCcccCCHHHH
Q 011959 200 VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN----------KGEIAAIILEPVVGNSGFIAPKPDFL 269 (474)
Q Consensus 200 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~a~vi~ep~~~~~G~i~~~~~~l 269 (474)
...| .++..++++|++++++.+++. +....+|++|++.++.|.+.+ +
T Consensus 203 ~~~G-------------------a~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~----l 259 (489)
T PLN02483 203 RGSG-------------------ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK----L 259 (489)
T ss_pred HHcC-------------------CeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC----H
Confidence 3322 246677888999998877631 112358888999999999998 9
Q ss_pred HHHHHHHHHhCCEEEEecccc-Cc--ccCCCccccccCCCC---cee--ehhhhcCCCcceEEEEecHHHHHhhcCCCCc
Q 011959 270 NAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGVTP---DLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM 341 (474)
Q Consensus 270 ~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~~p---di~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~ 341 (474)
++|.++|++||++||+||+|+ |. ++| .+..+++++.| |++ ||||++|+ +.||+++++++++.+......
T Consensus 260 ~~I~~la~~~~~~livDEa~s~g~~G~~G-~g~~~~~~v~~~~~dI~~~SfSKs~g~--~GG~i~~~~~li~~l~~~~~~ 336 (489)
T PLN02483 260 PEIVAVCKKYKAYVYLDEAHSIGAVGKTG-RGVCELLGVDPADVDIMMGTFTKSFGS--CGGYIAGSKELIQYLKRTCPA 336 (489)
T ss_pred HHHHHHHHHcCCEEEEECcCccCccCCCC-CchHHhcCCCcccCcEEEEecchhccc--CceEEEcCHHHHHHHHHhCcc
Confidence 999999999999999999995 33 233 33456677654 565 89999984 348999999999998742211
Q ss_pred ccccCCCCChHHHHHHHHHHHHhcCC-------CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCc
Q 011959 342 YQAGTLSGNPLAMTAGIHTLKRLKEP-------GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY 414 (474)
Q Consensus 342 ~~~~t~~~~~~~~aaa~aal~~~~~~-------~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~ 414 (474)
..+ ..+.+|..++++.++|+.+..+ +.+++++++.+++++.|+++ ++.......+.++++.+..
T Consensus 337 ~~~-~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~----G~~v~~~~~sp~~~l~l~~---- 407 (489)
T PLN02483 337 HLY-ATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM----GFEVLGDNDSPVMPIMLYN---- 407 (489)
T ss_pred ccc-cCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC----CCcccCCCCCCEEEEEECC----
Confidence 111 2234667777788888876421 34567788888888888775 2211111223444554421
Q ss_pred CcccccccchHHHHHHHHHHHHCCeEecccCC-------cceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 415 NFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-------~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
......+.+.|+++||.+.+.++ ..+|+ +..+|+|+|++++++|+++++.
T Consensus 408 ---------~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 408 ---------PAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDL 466 (489)
T ss_pred ---------HHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 12345788999999999986543 23454 5678999999999999998764
No 106
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.96 E-value=2.2e-27 Score=222.03 Aligned_cols=348 Identities=15% Similarity=0.128 Sum_probs=249.3
Q ss_pred EeeccCEEEEcCC--CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-CCCCC-CHHHHHHHHHHHhhCC---CCCeE
Q 011959 86 DSVKGSHMWDIDG--NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGAP-CLLENVLAEMVISAVP---SIEMV 158 (474)
Q Consensus 86 ~~~~G~~~~d~dG--~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~-~~~~~~la~~l~~~~~---~~~~v 158 (474)
.++..+..||..+ ..+| -.|-+...-..+|+|++|+++.+++|. +|.+. .++..++.++..+++. ..+.+
T Consensus 10 r~~t~s~KWd~~~g~~Dvl---PmWVADMDf~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i 86 (388)
T COG1168 10 RLGTNSLKWDAHPGNEDVL---PMWVADMDFPTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWI 86 (388)
T ss_pred hcCCCceeccccCCCCCcc---eeeeecccCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceE
Confidence 3566777888765 3343 333335555589999999999999974 33333 4478899999999886 47899
Q ss_pred EEeCCHHHHHHHHHHHhHhhcC-CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHH
Q 011959 159 RFVNSGTEACMGVLRLARAFTG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 237 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~-~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le 237 (474)
+|+++.--++..+|+ .+|+ ++.|++..|.|+. ...+....|..+...++.... ..+.+ |+++||
T Consensus 87 ~~~p~VVpgi~~~I~---~~T~~gd~Vvi~tPvY~P-F~~~i~~n~R~~i~~pL~~~~--------~~y~i---D~~~LE 151 (388)
T COG1168 87 VFVPGVVPGISLAIR---ALTKPGDGVVIQTPVYPP-FYNAIKLNGRKVIENPLVEDD--------GRYEI---DFDALE 151 (388)
T ss_pred EEcCcchHhHHHHHH---HhCcCCCeeEecCCCchH-HHHHHhhcCcEEEeccccccC--------CcEEe---cHHHHH
Confidence 999999999999999 7776 5778888888877 344555566655443332211 12333 899999
Q ss_pred HHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccC-CCccccccCCCCc----ee-
Q 011959 238 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGGAQEYFGVTPD----LT- 310 (474)
Q Consensus 238 ~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g-~~~~~~~~g~~pd----i~- 310 (474)
+.+.+. +++++|++.++|++|.+...+| |.+|.+||.+||+++|+||+|..+ ..| ++..+. .+.++ .+
T Consensus 152 ~~~~~~--~vkl~iLCnPHNP~Grvwt~ee-L~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a--~ls~~~a~~~it 226 (388)
T COG1168 152 KAFVDE--RVKLFILCNPHNPTGRVWTKEE-LRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA--SLSERFADNSIT 226 (388)
T ss_pred HHHhcC--CccEEEEeCCCCCCCccccHHH-HHHHHHHHHHcCCEEEeecccccccccCCCccchh--hcChhhhcceEE
Confidence 999853 6778888888888998887666 999999999999999999999999 666 343332 22222 22
Q ss_pred --ehhhhcC-CCcceEEEE-ecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHH
Q 011959 311 --TLGKIIG-GGLPVGAYG-GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGI 384 (474)
Q Consensus 311 --t~sK~l~-~G~~iG~~~-~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L 384 (474)
+-||+|+ +|+.+++++ .++++.+.+.+ ++...+..+.|.+++.|..++++..+. +++.+.++.+.+++.+.|
T Consensus 227 ~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~--~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l 304 (388)
T COG1168 227 LTSASKTFNLAGLKCAYIIISNRELRAKFLK--RLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFL 304 (388)
T ss_pred EeeccccccchhhhheeEEecCHHHHHHHHH--HHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999 899999985 45566455442 222334557799999999999987766 788899999999999999
Q ss_pred HHHhhhcCCeeEEeeece-eEEEEEecCCCcCcccccccchHHHHHHHHHHHHC-CeEecc------cCCcceEEecCCc
Q 011959 385 IDAGKKAGHAICGGYISG-MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAP------SQFEAGFTSLAHS 456 (474)
Q Consensus 385 ~~~~~~~~~~~~v~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~------~~~~~~~~~~~~t 456 (474)
++.. |-+......|. ++|+++..-... + .++.+.|+++ +|.+.+ .+.+.+|++++.+
T Consensus 305 ~~~~---P~v~v~~p~gTYL~WLD~r~l~l~--------d----~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acp 369 (388)
T COG1168 305 NKHL---PGVKVTEPQGTYLAWLDCRELGLD--------D----SELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACP 369 (388)
T ss_pred HhhC---CCcEEecCCCceeeeeeccccCCC--------h----HHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCC
Confidence 8764 33333445555 566677542211 1 3455566644 555544 4556779999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011959 457 SDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 457 ~e~i~~~l~~l~~~~~~ 473 (474)
++-+++++++|..+++.
T Consensus 370 r~~L~eal~ri~~al~~ 386 (388)
T COG1168 370 RAILEEALERLKRALKK 386 (388)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998875
No 107
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=3.4e-27 Score=236.22 Aligned_cols=337 Identities=17% Similarity=0.146 Sum_probs=224.0
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCC-CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA-PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRL 174 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ 174 (474)
+++.+||+..+. +.+ ..+|.+.+++.+.+..+....+ ......+|.+.++++++ ..+++++++|+++|+..+++.
T Consensus 26 ~~~~~i~l~~~~--~~~-~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~ 102 (380)
T PRK06225 26 KDKEMIWMGQNT--NHL-GPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRA 102 (380)
T ss_pred hcCCeEEccCCC--CCC-CCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHH
Confidence 345678887663 444 4789999999999876422222 23345678888888776 567899999999999999984
Q ss_pred hHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC-CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEc
Q 011959 175 ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP-GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE 253 (474)
Q Consensus 175 ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~e 253 (474)
. ...++.|++.+++|+.. ...+...|..+..++..... +. .-|++++++.+.. ++++|++.
T Consensus 103 ~--~~~gd~vl~~~p~y~~~-~~~~~~~g~~~~~v~~~~~~~~~------------~~d~~~l~~~~~~---~~~~v~l~ 164 (380)
T PRK06225 103 F--LSPGDNAVTPDPGYLII-DNFASRFGAEVIEVPIYSEECNY------------KLTPELVKENMDE---NTRLIYLI 164 (380)
T ss_pred h--cCCCCEEEEcCCCCcch-HHHHHHhCceEEeeccccccCCc------------cCCHHHHHhhcCC---CceEEEEe
Confidence 2 23456788889888753 33444445433322211000 00 0178888887763 46666655
Q ss_pred cccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccc-cCCCCceeehhhhcC-CCcceEEEEecHHH
Q 011959 254 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEY-FGVTPDLTTLGKIIG-GGLPVGAYGGRRDI 331 (474)
Q Consensus 254 p~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~-~g~~pdi~t~sK~l~-~G~~iG~~~~~~~i 331 (474)
.++|++|.+.+.++ +++|.++|++||+++|+||+|.+|..+....... .....++.+|||.+| +|+|+||+++++++
T Consensus 165 ~p~NptG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l 243 (380)
T PRK06225 165 DPLNPLGSSYTEEE-IKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDL 243 (380)
T ss_pred CCCCCCCcCCCHHH-HHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHH
Confidence 55667888776554 9999999999999999999998772222111111 011223558999998 79999999999999
Q ss_pred HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc-CC-eeEEeeeceeEEEEEe
Q 011959 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GH-AICGGYISGMFGFFFT 409 (474)
Q Consensus 332 ~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~-~~~v~~~g~~~~i~~~ 409 (474)
++.+.. . ...+++.|.+++.++.++|+.. +++.+++++..+..++.+.+.+.++ +. ....+..|.++++.+.
T Consensus 244 ~~~~~~---~-~~~~~~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 317 (380)
T PRK06225 244 IEVVKS---I-VINDLGTNVIAQEAAIAGLKVK--DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDIS 317 (380)
T ss_pred HHHHHH---H-HhcccCCCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcc
Confidence 988763 1 2246778888988888887642 3444555444444344444433332 22 1223556788888774
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-------CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.... ...++.+.|.++||.+.++. ...+|+++..++|++++++++|++++++
T Consensus 318 ~~~~------------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 318 EAGI------------DPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVET 376 (380)
T ss_pred cccC------------CHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 3211 12568888889999998752 2367888888999999999999999875
No 108
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.2e-27 Score=238.56 Aligned_cols=320 Identities=15% Similarity=0.150 Sum_probs=215.9
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCCCCC----CHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFGAP----CLLENVLAEMVISAVP---SIEMVRFVNSGTEACMG 170 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~----~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~ 170 (474)
..+|+..|. ++++ .+|.+++++.+.+... ....|+ ..+++.+++++.+.++ ..++|++|+|+++++..
T Consensus 27 ~~i~l~~~~--~~~~-~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNE--NPYP-PSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 368888773 3444 7899999999887531 112233 2456666666655543 56899999999999999
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (474)
+++. ....++.|++.+++|+++...+ ...|..+.. .+...+. --|++++++.++++ ++++|
T Consensus 104 ~~~~--~~~~gd~v~v~~P~y~~~~~~~-~~~g~~~~~--~~~~~~~------------~~d~~~l~~~~~~~--~~~~i 164 (368)
T PRK03317 104 LLQA--FGGPGRTALGFVPSYSMHPIIA-RGTHTEWVE--GPRAADF------------TLDVDAAVAAIAEH--RPDVV 164 (368)
T ss_pred HHHH--hcCCCCEEEEeCCChHHHHHHH-HhcCCeeEE--cccCCCC------------CCCHHHHHHHHhcc--CCCEE
Confidence 9984 2244577888999998754332 233332222 1111110 01789999988753 34566
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEE
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAY 325 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~ 325 (474)
+++.++|++|.+.+ .+++.+||+.++++||+||+|.+| +.+.....+..+..|+++ ||||++| +|+|+||+
T Consensus 165 ~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~ 240 (368)
T PRK03317 165 FLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYL 240 (368)
T ss_pred EEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhh
Confidence 66667888999999 777888888889999999999988 555444444445556766 8999998 79999999
Q ss_pred EecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeE
Q 011959 326 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 404 (474)
Q Consensus 326 ~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~ 404 (474)
++++++++.+.... .+++.++++++++.++|+..+. .+..++++++.+.+.+.|++ +++. ...+.|.++
T Consensus 241 ~~~~~~~~~l~~~~-----~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~ 310 (368)
T PRK03317 241 AAAPAVVDALRLVR-----LPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRE----LGLR-VAPSDANFV 310 (368)
T ss_pred hCCHHHHHHHHhcC-----CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCE-eCCCCCcEE
Confidence 99999999887321 3677889999999998874322 22233344444444444443 3432 233445554
Q ss_pred EE-EEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-cceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 405 GF-FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 405 ~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.+ .+. ....+.+.|+++||++.+.+. +++|+++. +.+++++++++|+++++
T Consensus 311 ~~~~~~----------------~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~-~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 311 LFGRFA----------------DRHAVWQGLLDRGVLIRDVGIPGWLRVTIG-TPEENDAFLAALAEVLA 363 (368)
T ss_pred EEeccC----------------CHHHHHHHHHHCCEEEEeCCCCCeEEEecC-CHHHHHHHHHHHHHHHH
Confidence 43 221 125688899999999988654 46788765 77899999999998875
No 109
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=3.6e-27 Score=236.00 Aligned_cols=333 Identities=14% Similarity=0.091 Sum_probs=220.9
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CC-CeEEEeCCHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SI-EMVRFVNSGTEACMGV 171 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~---~~~~~~~~la~~l~~~~~---~~-~~v~~~~sGseA~~~a 171 (474)
..|+|..|. ..++ .++.+.+++.+.+... ..|+ +..+++.++++++.+.++ .. ++|++++|+++|+..+
T Consensus 21 ~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGE--PDFV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 367777764 2344 4677889888887653 2232 345778888888887643 24 4799999999999999
Q ss_pred HHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE
Q 011959 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (474)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (474)
++. ...+++.|++.+++|+.+.. .....|..+..++....... .-|++++++.+.. ++++++
T Consensus 98 ~~~--l~~~gd~vl~~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~~~~---~~~~v~ 159 (378)
T PRK07682 98 MRA--IINPGDEVLIVEPSFVSYAP-LVTLAGGVPVPVATTLENEF------------KVQPAQIEAAITA---KTKAIL 159 (378)
T ss_pred HHH--hCCCCCEEEEeCCCchhhHH-HHHHcCCEEEEeecCCccCC------------CCCHHHHHhhcCc---ccEEEE
Confidence 884 23456889999999986433 33333433222111100000 0178999988763 466666
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc-ccccCCCCc---eeehhhhcC-CCcceEEE
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFGVTPD---LTTLGKIIG-GGLPVGAY 325 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~~g~~pd---i~t~sK~l~-~G~~iG~~ 325 (474)
++.++|++|.+.+.++ +++|.++|++|+++||+||+|.+| ..+.... ....+..+. +.+|||.++ +|+|+||+
T Consensus 160 ~~~p~NPtG~~~s~~~-~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~ 238 (378)
T PRK07682 160 LCSPNNPTGAVLNKSE-LEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFI 238 (378)
T ss_pred EECCCCCcCcCcCHHH-HHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhh
Confidence 6656788888776554 999999999999999999999988 5443211 122222223 337999999 89999999
Q ss_pred EecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeecee
Q 011959 326 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 403 (474)
Q Consensus 326 ~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~ 403 (474)
++++++++.+.. .....+++.+++++.++.++|+.... ....+.++++.+.+.+.|++. ++....+..|.+
T Consensus 239 ~~~~~~i~~l~~---~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~p~g~~~ 311 (378)
T PRK07682 239 AAPVYFSEAMLK---IHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI----GLTCHVPGGAFY 311 (378)
T ss_pred hcCHHHHHHHHH---HHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC----CCccCCCCeeEE
Confidence 999999998863 22334566788899988888863211 233445556666666666553 332222334455
Q ss_pred EEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 404 FGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+|+.+..... ...++.+.++ ++||.+.|+. ..++|+++..+++++++++++|++++++
T Consensus 312 ~~~~~~~~~~------------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 312 AFPSISSTGL------------SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred EEEeccCCCC------------CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 5555532110 1256777776 6899998862 3468999888999999999999999875
No 110
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=1.4e-26 Score=233.52 Aligned_cols=333 Identities=17% Similarity=0.136 Sum_probs=223.8
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGV 171 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~~~a 171 (474)
..|||..|. +--..++.+.+++.+.+++. ..|+ +..++++.+++++.+.++ +.+ +|++|+|+++|+..+
T Consensus 55 ~~i~l~~G~---P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~ 131 (413)
T PLN00175 55 GAINLGQGF---PNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAAT 131 (413)
T ss_pred CeEecCCCC---CCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHH
Confidence 578888884 32224788999999888763 2333 234678888888877654 344 699999999999998
Q ss_pred HHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE
Q 011959 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (474)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (474)
++. ....++.|++.+++|..+. ..+...|..+..++.... +. .-|++.|++.+.. ++++|+
T Consensus 132 ~~~--l~~~gd~Vlv~~P~y~~~~-~~~~~~g~~~~~v~~~~~-~~------------~~~~~~l~~~~~~---~~k~i~ 192 (413)
T PLN00175 132 ILG--LINPGDEVILFAPFYDSYE-ATLSMAGAKIKTVTLRPP-DF------------AVPEDELKAAFTS---KTRAIL 192 (413)
T ss_pred HHH--hCCCCCEEEEeCCCchhHH-HHHHHcCCEEEEEECCcc-cC------------CCCHHHHHHhcCc---CceEEE
Confidence 884 2355688999998886643 333444443322211100 00 0178899888863 567788
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc-ccccCCCCce---eehhhhcC-CCcceEEE
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFGVTPDL---TTLGKIIG-GGLPVGAY 325 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~~g~~pdi---~t~sK~l~-~G~~iG~~ 325 (474)
+++++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+.... .+..+..+.+ .+|||.++ +|||+||+
T Consensus 193 i~~p~NPtG~~~s~~~-l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~ 271 (413)
T PLN00175 193 INTPHNPTGKMFTREE-LELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWA 271 (413)
T ss_pred ecCCCCCCCcCCCHHH-HHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeee
Confidence 8877888998876554 999999999999999999999887 4332211 1222222233 37999999 89999999
Q ss_pred EecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeecee
Q 011959 326 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 403 (474)
Q Consensus 326 ~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~ 403 (474)
++++++++.+.. .....+++.+++.+.++.++|+..+. ++..+.++++.+.+.+.|++ +++....+..|.+
T Consensus 272 v~~~~l~~~l~~---~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~g~~f 344 (413)
T PLN00175 272 IAPPHLTWGVRQ---AHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE----VGFKVYPSSGTYF 344 (413)
T ss_pred EeCHHHHHHHHH---HHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCeeEE
Confidence 999999988863 23334678889999999888863211 23444555555666665554 3433323334555
Q ss_pred EEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC---------CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 404 FGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~---------~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+++.+..... ....++++.|+ ++||.+.|+. .+.+|+++..+++++++++++|.+++++
T Consensus 345 ~~~~~~~~~~-----------~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 345 VMVDHTPFGF-----------ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLKR 413 (413)
T ss_pred EEEeccccCC-----------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHhC
Confidence 6666521110 01256778776 5699998862 2357888888999999999999998763
No 111
>PRK07324 transaminase; Validated
Probab=99.96 E-value=3.9e-27 Score=234.72 Aligned_cols=336 Identities=15% Similarity=0.121 Sum_probs=218.3
Q ss_pred EEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHH
Q 011959 94 WDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMG 170 (474)
Q Consensus 94 ~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~la~~l~~~~~--~~~~v~~~~sGseA~~~ 170 (474)
++..|..++++..+ .+.-..++.+ +++.+++.+. ..|+. .....+|.+.+++++. .+++|++|+|+++|+..
T Consensus 21 ~~~~~~~~~~~~~~---e~~~~~~~~~-~~~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~ 95 (373)
T PRK07324 21 YDIAESCIDSLTLE---ELLALAGKNP-EAFYQELGQKKLTYGW-IEGSPEFKEAVASLYQNVKPENILQTNGATGANFL 95 (373)
T ss_pred cccccCCCCCCcHH---HHHhccCcch-HHHHHHHhcCCccCCC-CCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHH
Confidence 55666667777666 4444456667 8888877763 33332 2223455555555443 46899999999999999
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (474)
++.. ....+++|++..++|.... ......|..+..++.....++ ..|++++++.+.. ++++|
T Consensus 96 ~~~~--l~~~gd~Vl~~~P~y~~~~-~~~~~~g~~v~~v~~~~~~~~------------~~d~~~l~~~~~~---~~kli 157 (373)
T PRK07324 96 VLYA--LVEPGDHVISVYPTYQQLY-DIPESLGAEVDYWQLKEENGW------------LPDLDELRRLVRP---NTKLI 157 (373)
T ss_pred HHHH--hCCCCCEEEEcCCCchhHH-HHHHHcCCEEEEEecccccCC------------CCCHHHHHHhCCC---CCcEE
Confidence 9984 2345678888888886643 333334433322111111111 0178888887753 56788
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCc---eeehhhhcC-CCcceEEE
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD---LTTLGKIIG-GGLPVGAY 325 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pd---i~t~sK~l~-~G~~iG~~ 325 (474)
+++.++|++|.+.+.++ +++|.++|++||++||+||+|.++ ..+... ......++ +.+|||.++ +|+|+||+
T Consensus 158 ~i~~p~NPtG~~~~~~~-l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~--s~~~~~~~~I~~~s~SK~~~~~G~RiG~i 234 (373)
T PRK07324 158 CINNANNPTGALMDRAY-LEEIVEIARSVDAYVLSDEVYRPLDEDGSTP--SIADLYEKGISTNSMSKTYSLPGIRVGWI 234 (373)
T ss_pred EEeCCCCCCCCCCCHHH-HHHHHHHHHHCCCEEEEEccccccccCCCCC--ChhhccCCEEEEecchhhcCCccceeEEE
Confidence 88877888998887555 999999999999999999999888 433211 11122223 337999999 89999999
Q ss_pred EecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeec-eeE
Q 011959 326 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS-GMF 404 (474)
Q Consensus 326 ~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g-~~~ 404 (474)
++++++++.+.. .....+++.+.+++.++..+|+.. +.+.++.++..+..++.|.+.+.+++....+.+.| .++
T Consensus 235 ~~~~~li~~~~~---~~~~~~~~~~~~~q~~a~~~l~~~--~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~ 309 (373)
T PRK07324 235 AANEEVIDILRK---YRDYTMICAGVFDDMLASLALEHR--DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTS 309 (373)
T ss_pred ecCHHHHHHHHH---HhCcEEecCChHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEE
Confidence 999999988873 334446677888888888877522 23334433333333344444444443333344444 445
Q ss_pred EEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
++.+... ....++++.|+ ++||.+.|+. .+++|+++..+++.+++++++|.+++++
T Consensus 310 ~i~~~~~-------------~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 310 FVKLDVD-------------MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred EEEeCCC-------------CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 5555321 01246777765 6799999974 2467899888999999999999998865
No 112
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.2e-26 Score=231.70 Aligned_cols=330 Identities=12% Similarity=0.096 Sum_probs=218.6
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCC----CCHHHHHHHHHHHhhCC---CC-CeEEEeCCHHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA----PCLLENVLAEMVISAVP---SI-EMVRFVNSGTEACM 169 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~----~~~~~~~la~~l~~~~~---~~-~~v~~~~sGseA~~ 169 (474)
|..++||..|. ..++ .++.+.+++.+.+.....+++ ..++++.+++++.+.++ .. ++|++|+|+++++.
T Consensus 31 ~~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 107 (399)
T PRK07681 31 GHKMIDLSIGN--PDMP-PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLV 107 (399)
T ss_pred CCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHH
Confidence 55678888773 2233 578899998887765333333 34677788888876543 45 78999999999999
Q ss_pred HHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEE
Q 011959 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (474)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (474)
.+++. ....++.|++.+++|.++... +...|..+..++.....++ . -|++++++.+.. ++++
T Consensus 108 ~~~~~--~~~~Gd~Vlv~~P~y~~~~~~-~~~~G~~~~~v~~~~~~~~---------~---~d~~~l~~~~~~---~~k~ 169 (399)
T PRK07681 108 HLPMV--YANPGDIILVPDPGYTAYETG-IQMAGATSYYMPLKKENDF---------L---PDLELIPEEIAD---KAKM 169 (399)
T ss_pred HHHHH--hCCCCCEEEECCCCccchHHH-HHhcCCEEEEEecCCCCCC---------c---CCHHHHHHhccc---cceE
Confidence 98874 234567889889999875443 3344443332221111111 0 178888877752 5677
Q ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-c-ccccCCC---CceeehhhhcC-CCcce
Q 011959 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-A-QEYFGVT---PDLTTLGKIIG-GGLPV 322 (474)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~-~~~~g~~---pdi~t~sK~l~-~G~~i 322 (474)
|+++.++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+... . .+..+.. ..+.+|||.++ +|+|+
T Consensus 170 v~l~~P~NPTG~~~s~~~-~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRi 248 (399)
T PRK07681 170 MILNFPGNPVPAMAHEDF-FKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRI 248 (399)
T ss_pred EEEeCCCCCcCcCCCHHH-HHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCcccee
Confidence 777755788998887666 999999999999999999999888 443211 1 1111111 12338999998 89999
Q ss_pred EEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeee
Q 011959 323 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (474)
Q Consensus 323 G~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (474)
||+++++++++.+.. ......++.+.+.+.++.++|+...+ +...+.++++.+.+.+.|++ +++....+..
T Consensus 249 G~~i~~~~l~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~~ 321 (399)
T PRK07681 249 GYMIGNEEIVRALTQ---FKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRT----FGWNVDKPAG 321 (399)
T ss_pred EEEecCHHHHHHHHH---HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCe
Confidence 999999999988863 22233567788888888888753211 12233344444444444443 4433223445
Q ss_pred ceeEEEEEecCCCcCcccccccchHHHHHHHHHHHH-CCeEecccC------CcceEEecCCcHHHHHHHHHHHHH
Q 011959 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
|.++|+.+... ....++.+.+++ +||.+.|+. .+++|+++..+++++++++++|.+
T Consensus 322 g~f~~~~l~~~-------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 322 SMFVWAEIPKG-------------WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred eeEEEEECCCC-------------CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 77888877421 112567788877 899998862 236789888899999999999987
No 113
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=1.2e-26 Score=235.85 Aligned_cols=324 Identities=13% Similarity=0.110 Sum_probs=213.1
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 176 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~---~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar 176 (474)
..+||..| ++.....|.+.+++.+.......|+. ..+++..+++++....+..++|++|+|+++|+..+++.
T Consensus 86 ~~i~L~~g---~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~-- 160 (431)
T PRK15481 86 PLHDLAGG---NPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCA-- 160 (431)
T ss_pred hhhhhhcC---CCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHH--
Confidence 45676666 33332346677777775544333432 24555666666554333346899999999999999984
Q ss_pred hhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcc-c
Q 011959 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP-V 255 (474)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep-~ 255 (474)
....++.|++.+|+|.++. ..+...|..+..++.. ..++ |++.|++.++. +++++++.| +
T Consensus 161 l~~pgd~Vlv~~P~y~~~~-~~~~~~g~~~~~v~~~-~~g~--------------~~~~l~~~~~~---~~k~i~~~p~p 221 (431)
T PRK15481 161 HLLPGDSVAVEDPCFLSSI-NMLRYAGFSASPVSVD-AEGM--------------QPEKLERALAQ---GARAVILTPRA 221 (431)
T ss_pred hCCCCCEEEEeCCCcHHHH-HHHHHcCCeEEeeccC-CCCC--------------CHHHHHHHHhc---CCCEEEECCCC
Confidence 2344678899999997753 3334445433332221 1121 78999998864 466777774 5
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcCCCcceEEEEecHH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIGGGLPVGAYGGRRD 330 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~~G~~iG~~~~~~~ 330 (474)
+|++|.+.+.++ +++|.++|++| +++||+||+|..| ..+....... ..+.++ ||||.+++|+|+||++++++
T Consensus 222 ~NPTG~~~s~~~-~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~--~~~~vi~~~SfSK~~~~GlRiG~~i~~~~ 298 (431)
T PRK15481 222 HNPTGCSLSARR-AAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQ--TTQRWALIRSVSKALGPDLRLAFVASDSA 298 (431)
T ss_pred CCCCCccCCHHH-HHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcC--CCCCEEEEeeeccccCCCceeEEEeCCHH
Confidence 667888887555 99999999999 9999999999887 4332111111 123333 79999999999999999999
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEE
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 406 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i 406 (474)
+++.+.. .....+++.|.+++.++.++|+.-.- ....+.++++.+.+.+.|++ +++....+..|+++|+
T Consensus 299 ~~~~~~~---~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~----~~~~~~~p~gg~f~~~ 371 (431)
T PRK15481 299 TSARLRL---RLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQ----YGIAIPSPGDGLNLWL 371 (431)
T ss_pred HHHHHHH---HHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHH----cCCccccCCCeEEEEE
Confidence 9888862 22223456788999999888863110 12233344444444444443 3443334667888888
Q ss_pred EEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-------cceEEecC-CcHHHHHHHHHHHHHHHh
Q 011959 407 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFTSLA-HSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-------~~~~~~~~-~t~e~i~~~l~~l~~~~~ 472 (474)
.+..+ ..++.+.|.++||.+.|+.. +++|+++. .+++++++++++|.+++.
T Consensus 372 ~l~~~---------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 372 PLDTD---------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred ECCCC---------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 77421 24677888899999998631 24788766 479999999999999875
No 114
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=3.1e-26 Score=228.15 Aligned_cols=317 Identities=18% Similarity=0.173 Sum_probs=218.7
Q ss_pred CCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhc--------CCCC------CCCHHHHHHHHHHHhhCCCCCeEEEeC
Q 011959 98 GNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG--------TSFG------APCLLENVLAEMVISAVPSIEMVRFVN 162 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--------~~~~------~~~~~~~~la~~l~~~~~~~~~v~~~~ 162 (474)
..+++||.++ +|||+ .+|.+.+++.+++.+. .+.+ +..+...++.+.++++++ .+.+++++
T Consensus 3 ~~~~~~~~s~---~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~-~~~~l~~~ 78 (370)
T PRK05937 3 ESLSIDFVTN---DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG-APEAFIVP 78 (370)
T ss_pred CCceEEeECC---CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC-CCeEEEEC
Confidence 3468999999 99999 4999999999988763 2211 145678899999999884 46778899
Q ss_pred CHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc
Q 011959 163 SGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (474)
Q Consensus 163 sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (474)
||+.|+...+. .+.+++++|+.+..+|++....+.... + ....++++|+++|+++++.
T Consensus 79 sG~~a~~~~~~---~~~~~~d~ii~d~~~H~sv~~~~~~~~------------~-------~~~~~~~~d~~~l~~~l~~ 136 (370)
T PRK05937 79 SGYMANLGLCA---HLSSVTDYVLWDEQVHISVVYSLSVIS------------G-------WHQSFRHNDLDHLESLLES 136 (370)
T ss_pred ChHHHHHHHHH---HhCCCCCEEEEEhhhhHHHHHHHHHcC------------C-------ceEEecCCCHHHHHHHHHh
Confidence 99999976544 455678899999999997766654321 1 1345678899999999975
Q ss_pred CC---CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--ccCCCccccccC---CCCceeehh
Q 011959 243 NK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFG---VTPDLTTLG 313 (474)
Q Consensus 243 ~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g---~~pdi~t~s 313 (474)
.. +++.+|+++++++++|.+.| +++|.++|++||++||+||+|+ |. ..+..+. ..++ +.+|+.|||
T Consensus 137 ~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~-~~~~~~~~~~~~~tls 211 (370)
T PRK05937 137 CRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFC-HSLGYENFYAVLVTYS 211 (370)
T ss_pred hhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchH-HhhCCCCCcEEEEech
Confidence 31 34567889999999999999 9999999999999999999995 53 4443221 2223 235678999
Q ss_pred hhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 314 KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP--GTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 314 K~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~--~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
|++|+ +.+++++.+++.+.+......+. .+.+.++++++++.++++.+.+. ...++++++.+++++.|...
T Consensus 212 K~~g~--~G~~vl~~~~~~~~~~~~~~~~~-~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~---- 284 (370)
T PRK05937 212 KALGS--MGAALLSSSEVKQDLMLNSPPLR-YSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA---- 284 (370)
T ss_pred hhhhc--CceEEEcCHHHHHHHHHhCCCCe-ecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC----
Confidence 99984 12445566766555442112222 23457888888888999888653 24455555555555544321
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC---CcceEEe--cCCcHHHHHHHHHH
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGFTS--LAHSSDDIQHTITA 466 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~~~~--~~~t~e~i~~~l~~ 466 (474)
. .+....+.+.. .....+.+.|.++||++.... .+.+|++ ..+|+||||++++.
T Consensus 285 ~-------~~~~~~i~~~~--------------~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~ 343 (370)
T PRK05937 285 A-------PGCVQPIFLPG--------------ISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSV 343 (370)
T ss_pred C-------CCCEEEEEeCC--------------hhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHH
Confidence 1 11111233311 112567888899999887432 2346765 56899999999999
Q ss_pred HHHHHhh
Q 011959 467 AEKVLRQ 473 (474)
Q Consensus 467 l~~~~~~ 473 (474)
|++++++
T Consensus 344 L~~~~~~ 350 (370)
T PRK05937 344 LATYLEK 350 (370)
T ss_pred HHHHHHH
Confidence 9998764
No 115
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.96 E-value=5.2e-26 Score=229.04 Aligned_cols=339 Identities=9% Similarity=0.111 Sum_probs=221.1
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHhhCC---CC-CeEEEeCCHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SI-EMVRFVNSGTEAC 168 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~---~~~~~~~~la~~l~~~~~---~~-~~v~~~~sGseA~ 168 (474)
++..+||..|.. +++ ..+|.+.+++.+.+.+. ..|+ +..++++.+++++.+.++ .. ++|++++|+++++
T Consensus 38 ~~~~i~l~~g~~-~~~-~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al 115 (405)
T PRK06207 38 PGRPVDFSHGDV-DAH-EPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGAL 115 (405)
T ss_pred CCCceecCCcCC-CCC-CCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 455667776632 222 25688999988887653 2232 245688899999988764 34 7899999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
..+++. ....++.|++.+++|.+... .+...|..+..++...... .+... -|+++|++.++. +++
T Consensus 116 ~~~~~~--l~~~Gd~Vlv~~P~y~~~~~-~~~~~g~~v~~v~~~~~~~------~~~~~---~d~~~l~~~~~~---~~k 180 (405)
T PRK06207 116 FLAVAA--TVARGDKVAIVQPDYFANRK-LVEFFEGEMVPVQLDYLSA------DKRAG---LDLDQLEEAFKA---GVR 180 (405)
T ss_pred HHHHHH--hcCCCCEEEEeCCCchhHHH-HHHHcCCEEEEEeccccCc------ccCCC---cCHHHHHHhhhh---cCe
Confidence 999984 23456789999999987543 3344444332221110000 00000 178999988864 356
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCC-ce---eehhhhcC-CCcc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTP-DL---TTLGKIIG-GGLP 321 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~p-di---~t~sK~l~-~G~~ 321 (474)
+|+++.++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+... ....+...+ .+ .+|||+++ +|+|
T Consensus 181 ~v~l~~P~NPTG~~~s~e~-l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlR 259 (405)
T PRK06207 181 VFLFSNPNNPAGVVYSAEE-IAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYR 259 (405)
T ss_pred EEEECCCCCCCCcCCCHHH-HHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccc
Confidence 6666666788999888666 999999999999999999999988 544321 111112222 22 37999999 8999
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhc-CCeeEEe
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKA-GHAICGG 398 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~v~ 398 (474)
+||+++++++++.+.. .......+.+.+.+.++.++|+.-.. ++..+.++++.+.+.+.|+ ++ ++....+
T Consensus 260 iG~ii~~~~l~~~~~~---~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~p 332 (405)
T PRK06207 260 LGVAFGSPAIIDRMEK---LQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLR----GVEGVFVRAP 332 (405)
T ss_pred eEEEEcCHHHHHHHHH---HHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh----cCCCceecCC
Confidence 9999999999888863 22222445566788888777752100 1223333333334444443 33 2322234
Q ss_pred eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 399 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 399 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
..|+++|+.+.... .....+.+.|+ ++||.+.|+. .+++|+++..+++++++++++|.+++
T Consensus 333 ~gg~fl~~~l~~~~------------~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l 400 (405)
T PRK06207 333 QAGSYLFPRLPRLA------------VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLI 400 (405)
T ss_pred CeeEEEEEeCcccC------------CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 46788888774211 01246788887 6899999863 24678998889999999999999988
Q ss_pred hh
Q 011959 472 RQ 473 (474)
Q Consensus 472 ~~ 473 (474)
++
T Consensus 401 ~~ 402 (405)
T PRK06207 401 ER 402 (405)
T ss_pred HH
Confidence 65
No 116
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=4.3e-26 Score=228.90 Aligned_cols=334 Identities=13% Similarity=0.099 Sum_probs=212.6
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 167 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA 167 (474)
+|+.++||..|. ..++ .++.+.+++.+.+.... .|+ +..++++++++++.+.++ +++ .|++|+|+++|
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGS--SDLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 356678888773 2333 47899999998876432 232 234677788888876543 456 69999999999
Q ss_pred HHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCe
Q 011959 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (474)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (474)
+..+++. ....++.|++.+++|.++...+ ...|..+..++.....++ ..|++++++.+.. ++
T Consensus 105 l~~~~~~--l~~~gd~Vlv~~P~y~~~~~~~-~~~g~~~~~v~~~~~~~~------------~~d~~~l~~~~~~---~~ 166 (388)
T PRK07366 105 TAHLPLA--VLNPGDFALLLDPGYPSHAGGV-YLAGGQIYPMPLRAENDF------------LPVFADIPTEVLA---QA 166 (388)
T ss_pred HHHHHHH--hCCCCCEEEEcCCCCcchHHHH-HhcCCEEEEEECCCccCC------------CCCHHHHHHhhcc---cc
Confidence 9999884 2345678999999998864333 334443322211100010 0167777665542 45
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCC---Cce---eehhhhcC-CC
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT---PDL---TTLGKIIG-GG 319 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~---pdi---~t~sK~l~-~G 319 (474)
++|++++++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+........... +.+ -+|||++| +|
T Consensus 167 k~i~l~~p~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 167 RLMVLSYPHNPTTAIAPLSF-FQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred eEEEEeCCCCCCCccCCHHH-HHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 67777777888999887666 999999999999999999999888 44321011111111 222 38999998 89
Q ss_pred cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEE
Q 011959 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (474)
Q Consensus 320 ~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (474)
+|+||+++++++++.+.... ....++..+..+.++++++...++ +..++.++++.+.+.+.|++ +++....
T Consensus 246 lRiG~~v~~~~li~~l~~~~---~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~----~~~~~~~ 318 (388)
T PRK07366 246 FRIGFAIGNAQLIQALRQVK---AVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQ----IGWPVPL 318 (388)
T ss_pred hhheehcCCHHHHHHHHHHH---hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccC
Confidence 99999999999998886321 111223333344555666532111 23344444444555544443 4443334
Q ss_pred eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHH
Q 011959 398 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 398 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
+..|+++|+.+.... + ....++++.++ ++||.+.|+. .+++|++++.+++++++++++|.++
T Consensus 319 p~~g~f~~~~~~~~~----------~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 319 PEATMYVWAKLPEPW----------Q-GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAF 387 (388)
T ss_pred CCeeEEEEEECCccc----------C-CCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 567888888774310 0 00245666664 6799999862 2467888888999999999999875
No 117
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.95 E-value=9.2e-26 Score=226.29 Aligned_cols=333 Identities=14% Similarity=0.107 Sum_probs=219.0
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVL 172 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al 172 (474)
.+|+|..|.. .++ .++.+.+++.+.+.... .|+ +..+++.++++++.+.++ ..+++++++|+++|+..++
T Consensus 25 ~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGES--DLP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 4678887742 232 47899999998887642 232 245778888888887654 4689999999999999999
Q ss_pred HHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEE
Q 011959 173 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 252 (474)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ 252 (474)
+. ....++.|++.+++|.... ..+...|..+..++...... .+. -|++++++.++. ++++|++
T Consensus 102 ~~--l~~~gd~vl~~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~--------~~~---~d~~~l~~~~~~---~~~~i~l 164 (382)
T PRK06108 102 QA--LVGPGDEVVAVTPLWPNLV-AAPKILGARVVCVPLDFGGG--------GWT---LDLDRLLAAITP---RTRALFI 164 (382)
T ss_pred HH--hcCCCCEEEEeCCCccchH-HHHHHCCCEEEEeeCCCCCC--------Ccc---CCHHHHHHhcCc---cceEEEE
Confidence 84 2334677888888886643 33333444332211110000 000 178899888753 4667777
Q ss_pred ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc-CCCc-c-ccccCCCCce---eehhhhcC-CCcceEE
Q 011959 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AYGG-A-QEYFGVTPDL---TTLGKIIG-GGLPVGA 324 (474)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~-g~~~-~-~~~~g~~pdi---~t~sK~l~-~G~~iG~ 324 (474)
+.++|++|.+.+ .+.+++|.++|++||++||+||+|.+| .. +... . ....+..+.+ .+|||.++ +|+|+||
T Consensus 165 ~~p~NPtG~~~~-~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 243 (382)
T PRK06108 165 NSPNNPTGWTAS-RDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGW 243 (382)
T ss_pred ECCCCCCCcccC-HHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceee
Confidence 667788898875 444999999999999999999999988 43 2111 1 1111112222 37999998 7999999
Q ss_pred EEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeece
Q 011959 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 402 (474)
Q Consensus 325 ~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~ 402 (474)
+++++++++.+.. .....+.+.+++.+.++.++|+...+ ++..++++++.+.+.+.|++.. ++....+..|.
T Consensus 244 ~~~~~~~~~~~~~---~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~p~~g~ 317 (382)
T PRK06108 244 LVAPPALGQVLEK---LIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALP---GVEVAKPDGAM 317 (382)
T ss_pred eeCCHHHHHHHHH---HHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC---CCcccCCCeeE
Confidence 9999999888763 22334566788899898888864211 2344455555555555554431 22222223455
Q ss_pred eEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
++++.+... ....++++.|+ ++||++.|+. ..++|+++..+++++++++++|.++++
T Consensus 318 ~~~~~l~~~-------------~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 318 YAFFRIPGV-------------TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred EEEEeCCCC-------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 667666321 01246777776 5799998752 346788887799999999999999875
No 118
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3e-26 Score=228.18 Aligned_cols=323 Identities=15% Similarity=0.136 Sum_probs=214.4
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhh
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 178 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~ 178 (474)
.+|++..|- +.+| .+|++++++.+.+.....|+.+ ...+|.+.++++++ ..++|++++|+++++..+++. ..
T Consensus 33 ~~~~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y~~~--~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~--~~ 105 (369)
T PRK08153 33 FRARIGANE--SGFG-PSPSVIAAMREAAAEIWKYGDP--ENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRL--YV 105 (369)
T ss_pred ceeEecCCC--CCCC-CCHHHHHHHHHHHHHhhcCCCC--ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHH--hc
Confidence 456887763 3444 6889999998877543334322 24577777777775 567999999999999998884 23
Q ss_pred cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCC
Q 011959 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (474)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (474)
..++.|++.+++|.+....+ ...|..+..+ |.... ..|++++++.+.. +++++|++..++|+
T Consensus 106 ~~gd~vlv~~p~y~~~~~~~-~~~g~~~~~v--p~~~~-------------~~~~~~l~~~~~~--~~~~~i~l~~P~NP 167 (369)
T PRK08153 106 EPGDPVVTSLGAYPTFNYHV-AGFGGRLVTV--PYRDD-------------REDLDALLDAARR--ENAPLVYLANPDNP 167 (369)
T ss_pred CCCCEEEECCCcchHHHHHH-HHcCCeEEEe--eCCCC-------------CCCHHHHHHHhcc--cCCcEEEEeCCCCC
Confidence 45677888888887754322 2223322211 11000 1167777665543 24566666555677
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHHHH
Q 011959 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIME 333 (474)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i~~ 333 (474)
+|.+.+.++ +.+|.++|+ ++++||+||+|..| ..+...... ...++++ ||||++| +|+|+||+++++++++
T Consensus 168 tG~~~~~~~-l~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~ 243 (369)
T PRK08153 168 MGSWHPAAD-IVAFIEALP-ETTLLVLDEAYCETAPAGAAPPID--TDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIK 243 (369)
T ss_pred CCCCCCHHH-HHHHHHhCC-CCcEEEEeCchhhhcCcccchhhh--hcCCCEEEEecchHhccCcchheeeeecCHHHHH
Confidence 899888665 777777776 49999999999888 443221111 1234433 8999999 8999999999999998
Q ss_pred hhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCC
Q 011959 334 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 413 (474)
Q Consensus 334 ~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~ 413 (474)
.+... ..+++.|++++.++.++|+ ++++.+++++..+..++.+.+.+...++. ..+..|.++++.+..
T Consensus 244 ~l~~~-----~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~~-~~p~~~~f~~~~~~~--- 311 (369)
T PRK08153 244 AFDKV-----RNHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGLT-PLPSATNFVAIDCGR--- 311 (369)
T ss_pred HHHHh-----hcCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCc-cCCCcCcEEEEECCC---
Confidence 88632 1346789999999998885 34455566666666666665555555542 235566676665521
Q ss_pred cCcccccccchHHHHHHHHHHHHCCeEec-ccC---CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 414 YNFEDAKKSETTKFARFYRGMLEEGVYFA-PSQ---FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~-~~~---~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+......+.+.|+++||.+. |+. ..++|+++. ++++++.++++|++++..
T Consensus 312 ---------~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~-~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 312 ---------DGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG-PDEELDLFAEALPEALEA 365 (369)
T ss_pred ---------CcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 11234678899999999995 432 246788866 789999999999998754
No 119
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.4e-26 Score=228.42 Aligned_cols=318 Identities=13% Similarity=0.100 Sum_probs=210.7
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhh
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 178 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~ 178 (474)
+++||.+|. +++| .+|.+.+++.+.++... .++.....+|.+.+++++. +.+++++++|+++++..+++. ..
T Consensus 30 ~~i~l~~n~--~~~~-~~~~v~~a~~~~~~~~~--~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~--~~ 102 (359)
T PRK03158 30 KIVKLASNE--NPYG-PSPKVKEAIAAHLDELA--LYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRA--LL 102 (359)
T ss_pred ceEEecCCC--CCCC-CCHHHHHHHHHHHHHhh--cCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHH--Hh
Confidence 688998875 4566 58899999998876532 2234445566666766665 568999999999999988873 22
Q ss_pred cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCC
Q 011959 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (474)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (474)
..++.|++.+++|+++... ....|..+...+.. .+ ..|++++++.+.. ++++++++.++|+
T Consensus 103 ~~gd~v~~~~p~y~~~~~~-~~~~g~~~~~~~~~--~~-------------~~d~~~l~~~~~~---~~~~v~i~~p~NP 163 (359)
T PRK03158 103 NPGTNTVMAEPTFSQYRHN-AIIEGAEVREVPLK--DG-------------GHDLEAMLKAIDE---QTKIVWICNPNNP 163 (359)
T ss_pred CCCCEEEEcCCCHHHHHHH-HHHcCCeEEEEecC--CC-------------CcCHHHHHHhcCC---CCCEEEEeCCCCC
Confidence 4567899999999875433 23334332221111 00 0178888877653 5667776667888
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC-CccccccCCCCce---eehhhhcC-CCcceEEEEecHHHH
Q 011959 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDL---TTLGKIIG-GGLPVGAYGGRRDIM 332 (474)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pdi---~t~sK~l~-~G~~iG~~~~~~~i~ 332 (474)
+|.+.+.++ +.++.+.|+ +|++||+||+|..| ..+. .......+..+.+ .||||.++ +|+|+||++++++++
T Consensus 164 tG~~~~~~~-l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~ 241 (359)
T PRK03158 164 TGTYVNHEE-LLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELI 241 (359)
T ss_pred CCCCCCHHH-HHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHH
Confidence 999998444 444444442 69999999999877 4321 1111111112222 38999999 899999999999999
Q ss_pred HhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCC
Q 011959 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (474)
Q Consensus 333 ~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (474)
+.+... ..+++.|++++.++.++|+ +.++.+++.+..+..++.+.+.+.++++. ..++.|.++++.+...
T Consensus 242 ~~~~~~-----~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~g~~i~~~~~~~- 311 (359)
T PRK03158 242 EKLNIA-----RPPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYGLF-YYPSQTNFIFVDTGRD- 311 (359)
T ss_pred HHHHHh-----cCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCe-eCCCcCcEEEEECCCC-
Confidence 888632 1246789999999988885 23344444444444444444444444432 3456688888765211
Q ss_pred CcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHH
Q 011959 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
..++.+.|+++||.+.++. .+++|+++. +.+++++++++|+++
T Consensus 312 --------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 312 --------------ANELFEALLKKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred --------------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 2568888899999999862 345777755 889999999999875
No 120
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=1.1e-25 Score=225.90 Aligned_cols=331 Identities=14% Similarity=0.128 Sum_probs=217.5
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMG 170 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~ 170 (474)
|.+++++..|.. .++ .++.+.+++.+.+... ..|+ +..++++.+++++.+.++ ..++|++|+|+++|+..
T Consensus 31 ~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGEP--DFT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 345677776642 223 4889999999988753 2232 235677788888766543 57899999999999999
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (474)
+++. ...+++.|++.+++|......+ ...|..+..++.....+. --|++.+++.+++ +++++
T Consensus 108 ~~~~--~~~~gd~vlv~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~------------~~d~~~l~~~~~~---~~~~i 169 (387)
T PRK08960 108 ASSL--LVDPGKHWLLADPGYPCNRHFL-RLVEGAAQLVPVGPDSRY------------QLTPALVERHWNA---DTVGA 169 (387)
T ss_pred HHHH--hcCCCCEEEEcCCCCcchHHHH-HhcCCeEEEEecCcccCC------------CCCHHHHHHHhCc---cceEE
Confidence 9984 2345678999999998765433 333443322221111010 0178899888764 34455
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEE
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAY 325 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~ 325 (474)
++..++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+.. .......++++ +|||.+| +|+|+||+
T Consensus 170 ~i~~p~NPtG~~~~~~~-~~~l~~~~~~~~~~li~De~Y~~~~~~~~~--~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~ 246 (387)
T PRK08960 170 LVASPANPTGTLLSRDE-LAALSQALRARGGHLVVDEIYHGLTYGVDA--ASVLEVDDDAFVLNSFSKYFGMTGWRLGWL 246 (387)
T ss_pred EEECCCCCCCcCcCHHH-HHHHHHHHHHcCCEEEEEccccccccCCCC--CChhhccCCEEEEeecccccCCcccEEEEE
Confidence 55445678898887666 999999999999999999999888 43221 12233445654 6999998 89999999
Q ss_pred EecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH----HHHHHHHHHHHHHHHHhhhcCCeeE-Eeee
Q 011959 326 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE----YLNKITGELTQGIIDAGKKAGHAIC-GGYI 400 (474)
Q Consensus 326 ~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~----~~~~~~~~l~~~L~~~~~~~~~~~~-v~~~ 400 (474)
++++++++.+.. .....+.+.+.+.+.++.++|+. ...++.+ .++++.+.+.+.|+ .+++... .+..
T Consensus 247 ~~~~~~~~~~~~---~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l~~~L~----~~~~~~~~~p~g 318 (387)
T PRK08960 247 VAPPAAVPELEK---LAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFLLPALR----ELGFGIAVEPQG 318 (387)
T ss_pred EcCHHHHHHHHH---HHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHHH----hcCCcCCcCCCe
Confidence 999999888763 22333456688888888888752 1122333 33344444444444 3443322 3445
Q ss_pred ceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC-------CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~-------~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
|.++++++.+.. .+ ..++++.|+ ++||.+.|+. .+++|+++..+.+.+.+++++|.++++
T Consensus 319 ~~f~~~~~~~~~---------~~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 319 AFYLYADISAFG---------GD---AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred eEEEEEeccccC---------CC---HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 677777764310 01 246777766 6799999861 236788888889999999999998775
No 121
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.7e-26 Score=229.22 Aligned_cols=321 Identities=13% Similarity=0.140 Sum_probs=220.7
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHh
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~a 175 (474)
+++.+||+..|. +++| .+|.+++++.+.+..... |+.....+|.+.++++++ ..++|++++|+++++..+++.
T Consensus 27 ~~~~~i~l~~ne--n~~~-~~~~v~~a~~~~~~~~~~--Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~- 100 (366)
T PRK01533 27 GDHSFVKLASNE--NPFG-CSPRVLDELQKSWLDHAL--YPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRA- 100 (366)
T ss_pred CCCceEEeCCCC--CCCC-CCHHHHHHHHHHHHhcCc--CCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-
Confidence 356789988875 5666 688999999887655332 344445567777777775 678999999999999999884
Q ss_pred HhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011959 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
....++.|++.+++|.++... ....|..+..++. ..+. -|++++++.+++ ++++++++.+
T Consensus 101 -l~~~gd~vlv~~P~y~~~~~~-~~~~g~~v~~v~~--~~~~-------------~d~~~l~~~~~~---~~~~v~i~~P 160 (366)
T PRK01533 101 -VLKAGDNIVTAGATFPQYRHH-AIIEGCEVKEVAL--NNGV-------------YDLDEISSVVDN---DTKIVWICNP 160 (366)
T ss_pred -hcCCCCEEEEcCCcHHHHHHH-HHHcCCEEEEeec--CCCC-------------cCHHHHHHHhCc---CCcEEEEeCC
Confidence 223457888889998775443 3344443322211 1110 178999888763 4556666666
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC-ccccccCCCCcee---ehhhhcC-CCcceEEEEecH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRR 329 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~ 329 (474)
+|++|.+.+.++ +++|.++|++++ ++|+||+|.+| ..+.. .......-.+.++ ||||.++ +|+|+||+++++
T Consensus 161 ~NPTG~~~~~~~-l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~ 238 (366)
T PRK01533 161 NNPTGTYVNDRK-LTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE 238 (366)
T ss_pred CCCCCCCcCHHH-HHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH
Confidence 788999888666 888999998876 57779999877 43211 1111122223333 7999999 899999999999
Q ss_pred HHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEe
Q 011959 330 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (474)
Q Consensus 330 ~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (474)
++++.+... ..+++.|.+++.++.++|+ +.++.+++++.....++.+.+.....++. ..++.|+|+++.+.
T Consensus 239 ~~~~~l~~~-----~~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~-~~~~~~nf~~~~~~ 309 (366)
T PRK01533 239 ELIEKLNVV-----RLPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIP-FYQSQTNFIFLPVE 309 (366)
T ss_pred HHHHHHHHh-----cCCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCc-cCCCcCcEEEEeCC
Confidence 999988732 1357889999999998884 34455455544444455555544444432 23557888888762
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
+ ...+.+.|+++||.+++. .+++|++ ..+.+++++++++|+++++
T Consensus 310 ~----------------~~~~~~~l~~~GI~Vr~~-~~~iRis-~~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 310 N----------------GGEIYEACAHAGFIIRPF-PNGVRIT-VGTREQNEGVISVLQQHFE 354 (366)
T ss_pred C----------------HHHHHHHHHHCCcEEccC-CCceEEe-CCCHHHHHHHHHHHHHHHH
Confidence 1 146889999999999985 3567777 4577999999999998874
No 122
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.2e-25 Score=224.63 Aligned_cols=343 Identities=15% Similarity=0.121 Sum_probs=219.3
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 167 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA 167 (474)
.|..++||..+ ++.+..++.+.+++.+.+... ..|+ +..+++..+++++.+.++ ..+ +|++|+|+++|
T Consensus 31 ~~~~~~~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMG---NPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCc---CCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 45668888877 555545677888877766542 2232 234678888888877653 455 79999999999
Q ss_pred HHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHH----HHHHHHhcC
Q 011959 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVS----ALENLFENN 243 (474)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~----~le~~l~~~ 243 (474)
+..+++. ...+++.|++.+++|.+.... ....|..+..++.....+. .+ |++ .++++++++
T Consensus 108 l~~~~~~--l~~~gd~Vlv~~P~y~~~~~~-~~~~g~~~~~v~~~~~~~~---------~~---d~~~l~~~l~~~~~~~ 172 (403)
T PRK08636 108 YVHLVQA--ITNPGDVAIVPDPAYPIHSQA-FILAGGNVHKMPLEYNEDF---------EL---DEDQFFENLEKALRES 172 (403)
T ss_pred HHHHHHH--hCCCCCEEEEcCCCCcchHHH-HHhcCCEEEEEeccccccC---------cc---ChhhhhhHHHHHHhhc
Confidence 9999984 234578888889999775433 3344443332221101100 01 444 567777655
Q ss_pred CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCc----eeehhhhcC
Q 011959 244 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPD----LTTLGKIIG 317 (474)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pd----i~t~sK~l~ 317 (474)
..++++++++.++|++|.+.+.++ +++|.++|++|+++||+||+|..| ..+... ....+.-.+| +.+|||.++
T Consensus 173 ~~~~~~i~~~~P~NPTG~~~s~~~-~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 251 (403)
T PRK08636 173 SPKPKYVVVNFPHNPTTATVEKSF-YERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYN 251 (403)
T ss_pred cCCceEEEEeCCCCCCCccCCHHH-HHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccC
Confidence 456777777766788999888777 999999999999999999999877 443211 1111111122 236999997
Q ss_pred -CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeE
Q 011959 318 -GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC 396 (474)
Q Consensus 318 -~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 396 (474)
+|+|+||+++++++++.+.. ......++.+.+.+.++..+++. .+.+++++++.....++.+.+.+.+.++...
T Consensus 252 ~~GlRiG~iv~~~~li~~~~~---~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (403)
T PRK08636 252 MAGWRVGFVVGNKKLVGALKK---IKSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRKRRDVLIESFANAGWELQ 326 (403)
T ss_pred CccceeeeeeCCHHHHHHHHH---HHHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 89999999999999988763 22222345566677766655542 1233333333333333333333333443333
Q ss_pred EeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHH
Q 011959 397 GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 397 v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
.+..|+++|+.+.+.. . .....++.+.++ ++||.+.|+. .+++|+++..+++++++++++|.+
T Consensus 327 ~p~~g~~~~~~l~~~~-~---------~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~ 396 (403)
T PRK08636 327 KPRASMFVWAKIPEPA-R---------HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKK 396 (403)
T ss_pred CCCcceEEEEECCCcc-C---------CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 3456788888774210 0 001246766655 6899998862 246789888899999999999999
Q ss_pred HHhh
Q 011959 470 VLRQ 473 (474)
Q Consensus 470 ~~~~ 473 (474)
+++.
T Consensus 397 ~l~~ 400 (403)
T PRK08636 397 FLKE 400 (403)
T ss_pred HHHh
Confidence 8864
No 123
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.95 E-value=1.4e-25 Score=225.76 Aligned_cols=331 Identities=12% Similarity=0.024 Sum_probs=217.3
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC----CC-CeEEEeCCHHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP----SI-EMVRFVNSGTEAC 168 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~la~~l~~~~~----~~-~~v~~~~sGseA~ 168 (474)
.|+++|||..|. ..++ .++.+.+++.+.+.....|+ +..+++..+++++.+.++ +. ++|++|+|+++++
T Consensus 27 ~~~~~i~l~~~~--p~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGE--PKHP-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCC--CCCC-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 477888988874 2333 47889999888765433343 235678888888877654 23 4899999999999
Q ss_pred HHHHHHhHhhcC---CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCC
Q 011959 169 MGVLRLARAFTG---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 245 (474)
Q Consensus 169 ~~al~~ar~~~~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 245 (474)
..+++. .... ++.|++.+++|.++... ....|..+..++.....++ . -|++++++.+.+
T Consensus 104 ~~~~~~--l~~~~~~gd~vlv~~P~y~~~~~~-~~~~g~~~~~vp~~~~~~~---------~---~d~~~l~~~~~~--- 165 (396)
T PRK09147 104 FAFAQT--VIDRDGPGPLVVCPNPFYQIYEGA-ALLAGAEPYFLNCDPANNF---------A---PDFDAVPAEVWA--- 165 (396)
T ss_pred HHHHHH--HcCCCCCCCEEEEcCCCccchHHH-HHhcCCEEEEeccCccccC---------c---cCHHHHHHHHhh---
Confidence 999984 2233 56788889999775433 3344443333222111110 0 178888877653
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC--Ccc-c---cccCC--CCcee---ehh
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGA-Q---EYFGV--TPDLT---TLG 313 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~--~~~-~---~~~g~--~pdi~---t~s 313 (474)
++++++++.++|++|.+.+.++ +++|.++|++|+++||+||+|..| ..+. ... . ...+. .+.++ +||
T Consensus 166 ~~k~i~l~nP~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 244 (396)
T PRK09147 166 RTQLLFVCSPGNPTGAVLPLDD-WKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLS 244 (396)
T ss_pred ccEEEEEcCCCCCcCccCCHHH-HHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccc
Confidence 4667777666788999887666 999999999999999999999877 4331 111 1 01111 12233 799
Q ss_pred hhcC-CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 314 KIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 314 K~l~-~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
|.++ +|+|+||+++++++++.+.. .....+++.+++.+.++.+++..-.. ....+.++++.+.+.+.|.+.
T Consensus 245 K~~~~~GlRiG~~~~~~~l~~~~~~---~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---- 317 (396)
T PRK09147 245 KRSNVPGLRSGFVAGDAALLKKFLL---YRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV---- 317 (396)
T ss_pred cccCCccceeeeecCCHHHHHHHHH---HhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 9987 79999999999999988763 22223456788888887777631100 122333444444444444432
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------------CcceEEecCCcHH
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------------FEAGFTSLAHSSD 458 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------------~~~~~~~~~~t~e 458 (474)
+....+..|.++|+.+... ..++++.|+ ++||.+.|+. .+++|++++.+++
T Consensus 318 -~~~~~p~~g~f~~~~~~~~---------------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~ 381 (396)
T PRK09147 318 -LDVQLPDAGFYLWAKVPGD---------------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLA 381 (396)
T ss_pred -cCCCCCCeeEEEEEECCCC---------------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHH
Confidence 2222355788888876310 146777776 6799998763 2357888888999
Q ss_pred HHHHHHHHHHHHHh
Q 011959 459 DIQHTITAAEKVLR 472 (474)
Q Consensus 459 ~i~~~l~~l~~~~~ 472 (474)
++++++++|.++++
T Consensus 382 ~l~~~l~rl~~~~~ 395 (396)
T PRK09147 382 ECVEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998874
No 124
>PRK09148 aminotransferase; Validated
Probab=99.95 E-value=1.4e-25 Score=226.02 Aligned_cols=338 Identities=14% Similarity=0.085 Sum_probs=219.5
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 167 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA 167 (474)
.|+.+|||..|. ..++ .++.+.+++.+.+... ..|. +..+++..+++++.+.++ ..+ +|++|+|++++
T Consensus 28 ~~~~~i~l~~~~--p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGN--PDLP-TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 466788888762 2233 3788888888876532 2232 234677888888876543 355 79999999999
Q ss_pred HHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCe
Q 011959 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (474)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (474)
+..+++. ....++.|++.+++|.++...+ ...|..+..++... .+ ++++++++.++.+.+++
T Consensus 105 l~~~~~~--l~~~gd~Vl~~~P~y~~~~~~~-~~~g~~v~~v~~~~-~~--------------~~~~~l~~~~~~~~~~~ 166 (405)
T PRK09148 105 FANMAQA--ITAPGDVILCPNPSYPIHAFGF-IMAGGVIRSVPAEP-DE--------------EFFPALERAVRHSIPKP 166 (405)
T ss_pred HHHHHHH--hcCCCCEEEEcCCCCcccHHHH-HhcCCEEEEEeCCC-CC--------------CCccCHHHHHhhccccc
Confidence 9999884 2345678999999998864433 23343222211100 00 02344556665443456
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCc----eeehhhhcC-CCc
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPD----LTTLGKIIG-GGL 320 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pd----i~t~sK~l~-~G~ 320 (474)
.+++++.++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+... ....+.-.++ +-+|||.++ +|+
T Consensus 167 ~~v~l~~P~NPtG~~~s~~~-l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl 245 (405)
T PRK09148 167 IALIVNYPSNPTAYVADLDF-YKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW 245 (405)
T ss_pred eEEEEeCCCCCCCcCCCHHH-HHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch
Confidence 77777766788998887666 999999999999999999999887 433221 1111111122 337999999 899
Q ss_pred ceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEe
Q 011959 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 398 (474)
Q Consensus 321 ~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 398 (474)
|+||+++++++++.+.. .....+++.+.+++.++.+.|+..++ +...+.++++.+.+.+.|++ +++....+
T Consensus 246 R~G~~v~~~~~i~~l~~---~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p 318 (405)
T PRK09148 246 RMGFAVGNERLIAALTR---VKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGR----AGWDIPPP 318 (405)
T ss_pred heeeeeCCHHHHHHHHH---HHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCccCCC
Confidence 99999999999988863 22333556678888888887752111 22344445555555555544 34332234
Q ss_pred eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 399 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 399 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
..|+++|+.+.... .. ....++.+.|+ ++||.+.|+. ..++|+++..+++++++++++|.+++
T Consensus 319 ~~g~f~~~~l~~~~-~~---------~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l 388 (405)
T PRK09148 319 AASMFAWAPIPEAF-RH---------LGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFL 388 (405)
T ss_pred CeeEEEEEECCCcc-CC---------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 56778888764210 00 01246777766 6899999862 24678888889999999999999887
Q ss_pred hh
Q 011959 472 RQ 473 (474)
Q Consensus 472 ~~ 473 (474)
++
T Consensus 389 ~~ 390 (405)
T PRK09148 389 SS 390 (405)
T ss_pred HH
Confidence 64
No 125
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=1.7e-25 Score=221.51 Aligned_cols=320 Identities=24% Similarity=0.299 Sum_probs=217.5
Q ss_pred CEEEeccCChhhccCCCC-CHHHHHHHHHHHHhcC-C------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHA-DDQVLAALGETMKKGT-S------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMG 170 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~-~------~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~ 170 (474)
++||.|+++ .+||++ ||+|++++++.+++.. . .....+...++.+.++++++ .+..+++++|++++..
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~iv~~sg~~a~~~ 76 (349)
T cd06454 1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHG-KEAALVFSSGYAANDG 76 (349)
T ss_pred CCceecccC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhC-CCCEEEeccHHHHHHH
Confidence 468999998 999996 9999999999998732 1 11356777899999999884 4567888899999998
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC--CCCeE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--KGEIA 248 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~a 248 (474)
+++.. ..+++.|++.+ .+|......+...|. ++..++..|.+++++++++. +++++
T Consensus 77 ~~~~~--~~~gd~Vl~~~-~~~~~~~~~~~~~g~-------------------~~~~~~~~~~~~le~~i~~~~~~~~~~ 134 (349)
T cd06454 77 VLSTL--AGKGDLIISDS-LNHASIIDGIRLSGA-------------------KKRIFKHNDMEDLEKLLREARRPYGKK 134 (349)
T ss_pred HHHHh--cCCCCEEEEeh-hhhHHHHHHHHHcCC-------------------ceEEecCCCHHHHHHHHHHhhccCCCe
Confidence 88732 23345566544 455544333333232 12233444788999988753 24678
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc-c-cCCCccccccC---CCCcee--ehhhhcCCCc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGGAQEYFG---VTPDLT--TLGKIIGGGL 320 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~-r-~g~~~~~~~~g---~~pdi~--t~sK~l~~G~ 320 (474)
+|+++++++++|...+ +++|.++|++||++||+||+|. |. . .+.. ...+. ...|++ +++|.+++
T Consensus 135 ~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~-- 206 (349)
T cd06454 135 LIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRG--VEEFGGLTDDVDIIMGTLGKAFGA-- 206 (349)
T ss_pred EEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEccccccccCCCCCC--hhhhccccccCcEEEeechhhhcc--
Confidence 8899999999998887 9999999999999999999995 43 2 1211 11111 134554 79999985
Q ss_pred ceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 321 ~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
+.|++++++++++.+......+. .+.+.++..++++.++|+.+.+ +...+++.++.+++++.|.+. ++.....+
T Consensus 207 ~gG~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~ 281 (349)
T cd06454 207 VGGYIAGSKELIDYLRSYARGFI-FSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL----GFPVGGSP 281 (349)
T ss_pred cCCEEECCHHHHHHHHHhchhhh-ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc----CCcccCCC
Confidence 55888999999887764222222 2335678888899999988765 556777788888888877664 22211111
Q ss_pred eceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-------CcceEEec--CCcHHHHHHHHHHHHHH
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTSL--AHSSDDIQHTITAAEKV 470 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~~~~--~~t~e~i~~~l~~l~~~ 470 (474)
.+.++.+.+. +.....++.+.|.++||.+.+.+ ...+|+++ ..+++++++++++|+++
T Consensus 282 ~~~~~~~~~~-------------~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 282 SHIIPPLIGD-------------DPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCcEEEEeCC-------------ChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 2222222211 11234678899999999987642 23567754 46999999999999864
No 126
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.4e-25 Score=223.98 Aligned_cols=343 Identities=14% Similarity=0.065 Sum_probs=215.4
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCC--CC--CCCHHHHHHHHHHHhhCC----CCC-eEEEeCCHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FG--APCLLENVLAEMVISAVP----SIE-MVRFVNSGTEA 167 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~--~~~~~~~~la~~l~~~~~----~~~-~v~~~~sGseA 167 (474)
.|++++|+..|. ..++ .+|.+.+++.+.+..... |. +...++..+++++.+.++ +.+ +|++|+|++++
T Consensus 42 ~~~~~i~L~~g~--p~~~-~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 42 PDMELIDMGVGE--PDEM-ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 455678888874 3444 577888888887654221 22 235667777777766543 244 79999999999
Q ss_pred HHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCe
Q 011959 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (474)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (474)
+..+++. ....++.|++.+++|.+... .+...|..+..++.....++ ..|++++++.+.. ++
T Consensus 119 l~~~~~~--~~~~gd~Vlv~~P~y~~~~~-~~~~~g~~v~~v~~~~~~~~------------~~d~~~l~~~~~~---~~ 180 (410)
T PRK06290 119 LAMLPSC--FINPGDVTLMTVPGYPVTGT-HTKYYGGEVYNLPLLEENNF------------LPDLDSIPKDIKE---KA 180 (410)
T ss_pred HHHHHHH--hCCCCCEEEEeCCCCccHHH-HHHHcCCEEEEEecCCCcCC------------cCCHHHHHHhhcc---cc
Confidence 9999884 23456788899999987533 33334443332221100010 0178888887753 56
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc-ccccCCC---CceeehhhhcC-CCcc
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFGVT---PDLTTLGKIIG-GGLP 321 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~~g~~---pdi~t~sK~l~-~G~~ 321 (474)
++|+++.++|++|.+.+.++ +++|.++|++||++||+||+|..+ ..+.... .+..+.. .-+.+|||.++ +|+|
T Consensus 181 k~i~l~nP~NPTG~v~s~e~-l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlR 259 (410)
T PRK06290 181 KLLYLNYPNNPTGAVATKEF-YEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWR 259 (410)
T ss_pred eEEEEECCCCCCCcCCCHHH-HHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhh
Confidence 77777755788999887666 999999999999999999999877 4332111 1111111 12237999997 8999
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeee
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (474)
+||+++++++++.+.. .......+.+.+++.++.++|+...- +...++++++.+.+.+.|++ +++....+..
T Consensus 260 iG~ii~~~~l~~~l~~---~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~g 332 (410)
T PRK06290 260 LAFVVGNELIVKAFAT---VKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNE----VGFKAEMPGG 332 (410)
T ss_pred eEeEEeCHHHHHHHHH---HHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHh----CCCeecCCCe
Confidence 9999999999988863 21222334455777777777753110 23344445555555555544 3433222334
Q ss_pred ceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCC-eEecccCC--cceEEecC---CcHHHHHHHHHHHHHHHhhC
Q 011959 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG-VYFAPSQF--EAGFTSLA---HSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~v~~~~~--~~~~~~~~---~t~e~i~~~l~~l~~~~~~~ 474 (474)
|.++|+.+.+...... ......++++.|+++| +++.|+.. .++|++++ .++|+.++++++|++.+.++
T Consensus 333 ~f~l~v~lp~~~~~~~------~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 333 TFYLYVKAPKGTKSGI------KFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred eeEEEEECCCccccCC------CCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 5555666643210000 0012357889999886 45555432 35788765 59999999999999998764
No 127
>PRK08068 transaminase; Reviewed
Probab=99.95 E-value=3e-25 Score=222.88 Aligned_cols=330 Identities=14% Similarity=0.094 Sum_probs=212.9
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEAC 168 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~ 168 (474)
|..+|||..+ ++....+|.+.+++.+.+.... .|+ +..+++.++++++.+.++ ..+ +|++|+|+++++
T Consensus 31 ~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l 107 (389)
T PRK08068 31 GHDVINLGQG---NPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGL 107 (389)
T ss_pred CCCeEEecCC---CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHH
Confidence 3456888777 5555567889999998876532 232 235677788887765543 355 799999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
..+++. ...+++.|++.+++|..+... +...|..+..++.....++. -|++++++.+.. +++
T Consensus 108 ~~~~~~--~~~~gd~vlv~~P~y~~~~~~-~~~~g~~~~~i~~~~~~~~~------------~d~~~l~~~~~~---~~~ 169 (389)
T PRK08068 108 VELPQC--LMNPGDTILVPDPGYPDYLSG-VALARAQFETMPLIAENNFL------------PDYTKIPEEVAE---KAK 169 (389)
T ss_pred HHHHHH--hCCCCCEEEEcCCCCcchHHH-HHhcCCEEEEeecccccCCC------------CCHHHHHHhccc---cce
Confidence 988773 234567789989999765433 33444433222211011110 167888877753 456
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccC-CC-ccccccCCCCc---eeehhhhcC-CCcc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YG-GAQEYFGVTPD---LTTLGKIIG-GGLP 321 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g-~~-~~~~~~g~~pd---i~t~sK~l~-~G~~ 321 (474)
+|++..++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+ .. ......+..+. +.+|||.+| +|+|
T Consensus 170 ~v~l~~P~NPTG~~~s~~~-~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlR 248 (389)
T PRK08068 170 LMYLNYPNNPTGAVATKAF-FEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWR 248 (389)
T ss_pred EEEEECCCCCCCCcCCHHH-HHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccce
Confidence 6666645788998887666 999999999999999999999777 443 11 11122222222 237999998 8999
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
+||+++++++++.+.... .....+.+++.+.++.+++....+ +.+++.++++.+.+.+.|++ +++.. .++
T Consensus 249 iG~~~~~~~l~~~l~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~----~g~~~-~~~ 320 (389)
T PRK08068 249 VAFAVGNESVIEAINLLQ---DHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACRE----IGWEV-DAP 320 (389)
T ss_pred eEeEecCHHHHHHHHHHH---hhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcc-cCC
Confidence 999999999998886321 111234445566666666642111 23455555555566665554 34322 233
Q ss_pred ec-eeEEEEEecCCCcCcccccccchHHHHHHHHHHHH-CCeEecccC------CcceEEecCCcHHHHHHHHHHHHHH
Q 011959 400 IS-GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 400 ~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
.| .++++.+... ....++.+.|++ +||++.|+. .+++|+++..+++.+.+++++|.++
T Consensus 321 ~g~~~~~v~~~~~-------------~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 321 KGSFFAWMPVPKG-------------YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred CeeEEEEEECCCC-------------CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 44 5567776421 012578888886 699998852 2467888888889999999988764
No 128
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.5e-25 Score=218.91 Aligned_cols=316 Identities=17% Similarity=0.172 Sum_probs=222.5
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHhHh
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARA 177 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~v~~~~sGseA~~~al~~ar~ 177 (474)
.++|+.+|. |++| .+|.+.+++.+.++....| |+....+|.+.+++++. ..+.|+.+||.+|.+...++. .
T Consensus 23 ~~i~LssNe--nP~g-p~~~~~~~~~~~~~~~~rY--Pd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~--~ 95 (356)
T COG0079 23 GIIKLSSNE--NPYG-PPPKVIEAIRAALDKLNRY--PDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRA--F 95 (356)
T ss_pred cceeecCCC--CCCC-CCHHHHHHHHHHHHhhccC--CCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHH--h
Confidence 688999887 8888 5699999999988754434 55567788888888875 357899999999999999984 2
Q ss_pred hcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC----CCHHHHHHHHhcCCCCeEEEEEc
Q 011959 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF----NDVSALENLFENNKGEIAAIILE 253 (474)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~----~d~~~le~~l~~~~~~~a~vi~e 253 (474)
..+++.|++..++|.-+...+. ..|.. ++.++. .|++.+.+.+.+ ++.+|++.
T Consensus 96 ~~~gd~vl~~~Ptf~~Y~~~a~-~~g~~-------------------~~~v~~~~~~~d~~~~~~~~~~---~~~lv~i~ 152 (356)
T COG0079 96 VEPGDTVLIPEPTFSMYEIAAQ-LAGAE-------------------VVKVPLKEFRLDLDAILAAIRD---KTKLVFLC 152 (356)
T ss_pred hcCCCEEEEcCCChHHHHHHHH-hcCCe-------------------EEEecccccccCHHHHHHhhhc---CCCEEEEe
Confidence 3345799999999866443332 22322 222222 267777777763 46677777
Q ss_pred cccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEec
Q 011959 254 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGR 328 (474)
Q Consensus 254 p~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~ 328 (474)
.++|++|...+.++ ++++.+.|.+ +.+||+||+|..| . ........-.++++ ||||++| +|+|+||++++
T Consensus 153 nPNNPTG~~~~~~~-l~~l~~~~~~-~~~vVvDEAY~eF~~---~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~ 227 (356)
T COG0079 153 NPNNPTGTLLPREE-LRALLEALPE-GGLVVIDEAYIEFSP---ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN 227 (356)
T ss_pred CCCCCCCCCCCHHH-HHHHHHhCCC-CcEEEEeCchhhcCC---chhhhhccCCCCEEEEEecHHhhhcchhceeeccCC
Confidence 66788898888666 7777777777 9999999999988 5 11122222233354 8999999 99999999999
Q ss_pred HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEE
Q 011959 329 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (474)
Q Consensus 329 ~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (474)
+++++.+.+ ....|+.|.++++++.++|+.- ++.+...+....-+++|.+.+.+.++....++.++|+.+.+
T Consensus 228 ~~~i~~l~~-----vr~p~~v~~~a~~aa~aal~~~---~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~~ 299 (356)
T COG0079 228 PELIAALNK-----VRPPFNVSSPALAAAIAALRDA---DYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRV 299 (356)
T ss_pred HHHHHHHHH-----hcCCCCCCHHHHHHHHHHcccH---HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEEC
Confidence 999999984 3357888999999999988643 34444444444444444444444442223455678877776
Q ss_pred ecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-----cceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----EAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.+ .. ...+.+.|+++||+++.... .++|++ ..|+|+.++++++|+++++.
T Consensus 300 ~~-------------~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRit-vgt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 300 PD-------------AE-AAALAEALLKKGILVRDCSSVGLLPGYLRIT-VGTPEENDRLLAALREVLKG 354 (356)
T ss_pred CC-------------cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE-eCCHHHHHHHHHHHHHHHhc
Confidence 42 12 35788999999999998743 245655 45777779999999998764
No 129
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.1e-25 Score=223.41 Aligned_cols=321 Identities=15% Similarity=0.116 Sum_probs=211.6
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHh
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~a 175 (474)
+|.+++||..|. ++++ .+|.+.+++.+.+.....| +.....+|.+.++++++ ..++|++|+|+++++..+++.
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y--~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~- 101 (357)
T PRK14809 28 DPDDLVKLSSNE--NPHG-PSPAAVEAIREAAERVHSY--PKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARA- 101 (357)
T ss_pred CccceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhcC--CCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-
Confidence 456799998874 4455 6788999998877653333 33334567777777776 678999999999999999884
Q ss_pred HhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011959 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
....++.|++.+++|..+.. .....|..+...+.+...++ . .|++++++.+. ++++|+++++
T Consensus 102 -~~~~gd~V~v~~P~y~~~~~-~~~~~g~~~~~~~l~~~~~~-----------~-~~~~~~~~~~~----~~k~i~l~~p 163 (357)
T PRK14809 102 -MLDPGDTVLVPDPGFAYYGM-SARYHHGEVREYPVSKADDF-----------E-QTADTVLDAYD----GERIVYLTSP 163 (357)
T ss_pred -hcCCCCEEEEeCCChHHHHH-HHHHcCCeEEEEecccCcCC-----------C-cCHHHHHHhhc----CCcEEEEeCC
Confidence 23456788888998864332 23333443322222111111 0 15666655432 3566777777
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCceeehhhhcC-CCcceEEEEecHHHH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIM 332 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pdi~t~sK~l~-~G~~iG~~~~~~~i~ 332 (474)
+|++|.+.+.++ +++|.++|++ +++||+||+|..| ..+... ..+..+-..-+.||||.++ +|+|+||++++++++
T Consensus 164 ~NPTG~~~s~~~-~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~ 241 (357)
T PRK14809 164 HNPTGSEIPLDE-VEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWA 241 (357)
T ss_pred CCCCCcCCCHHH-HHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHH
Confidence 788999998666 7777777764 7899999999888 433211 1111111122348999998 899999999999999
Q ss_pred HhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCC
Q 011959 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (474)
Q Consensus 333 ~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (474)
+.+... ..+++.+++++.++.++|+ ++++.++.++..+..++.+.+.+.... .+..|+++++.+.+
T Consensus 242 ~~~~~~-----~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~~-- 307 (357)
T PRK14809 242 DAYARV-----NTPFAASELACRAGLAALD---DDEHVERTVETARWAREYIREELDAPT----WESAGNFVLAEVGD-- 307 (357)
T ss_pred HHHHHh-----CCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCcc----CCCCCCEEEEECCC--
Confidence 988731 2356778888888888774 233444444444444444444333222 24678888876521
Q ss_pred CcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
..++.+.|.++||.+.++. .+++|+++. +++++++++++|+++++
T Consensus 308 --------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 308 --------------ASAVAEAAQERGVIVRDCTSFGLPECIRITCG-TREETERAVEVLNEVLA 356 (357)
T ss_pred --------------HHHHHHHHHHCCEEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHhc
Confidence 1467788889999999874 235788765 57899999999999875
No 130
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.95 E-value=2.6e-25 Score=223.22 Aligned_cols=337 Identities=14% Similarity=0.114 Sum_probs=222.7
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---C-CCeEEEeCCHHHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---S-IEMVRFVNSGTEACMG 170 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~---~~~~~~~~la~~l~~~~~---~-~~~v~~~~sGseA~~~ 170 (474)
+.+|||..|.. .++ .++.+.+++.+.+... ..|+ +..++++.+++++...++ . .++|++++|+++|+..
T Consensus 30 ~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGEP--DFT-TPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 45889888852 344 3678889988877653 2232 235677778887766543 2 3689999999999999
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (474)
+++. ...+++.|++.+++|.++. ......|..+..++.. ..+. . -|++.+++.+++.++++++|
T Consensus 107 ~~~~--~~~~gd~vl~~~p~y~~~~-~~~~~~g~~~~~~~~~-~~~~---------~---~d~~~l~~~~~~~~~~~~~i 170 (391)
T PRK07309 107 SLTA--ILEPGDKVLLPAPAYPGYE-PIVNLVGAEIVEIDTT-ENDF---------V---LTPEMLEKAILEQGDKLKAV 170 (391)
T ss_pred HHHH--hcCCCCEEEEeCCCCcchH-HHHHHcCCEEEEEecC-CcCC---------c---CCHHHHHHHhhccCCCeEEE
Confidence 9884 2345678899999998854 3344444433221110 0000 0 17899999887654467788
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC-ccccccCCCCce---eehhhhcC-CCcceEE
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDL---TTLGKIIG-GGLPVGA 324 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pdi---~t~sK~l~-~G~~iG~ 324 (474)
+++.++|++|.+.+..+ +++|.++|++||+++|+||+|..| ..+.. .....+. ..++ .+|||.++ +|+|+||
T Consensus 171 ~l~~P~NPtG~~~s~~~-~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~GlRvG~ 248 (391)
T PRK07309 171 ILNYPANPTGVTYSREQ-IKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGLSKSHAMTGWRIGL 248 (391)
T ss_pred EEECCCCCCCcCcCHHH-HHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecChhhccCccceeEE
Confidence 77756788898887666 999999999999999999999888 43422 1111111 1122 27999998 8999999
Q ss_pred EEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeece
Q 011959 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 402 (474)
Q Consensus 325 ~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~ 402 (474)
+++++++++.+.. .....+.+.+++++.++.+.|+.... ....++++++.+++.+.|++ +++....+..|.
T Consensus 249 ~v~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~p~gg~ 321 (391)
T PRK07309 249 IFAPAEFTAQLIK---SHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD----LGFKIIKPDGAF 321 (391)
T ss_pred EEeCHHHHHHHHH---HHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCeeE
Confidence 9999999988863 12223346688888888887763211 22344555555656655554 343333334455
Q ss_pred eEEEEEecCCCcCcccccccchHHHHHHHHH-HHHCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRG-MLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
++++.+.... .....++.+. +.++||.+.|+. .+++|+++..+.+++++++++|.++++++
T Consensus 322 ~~~~~l~~~~-----------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 322 YIFAKIPAGY-----------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEEEECCCCC-----------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 6666653210 0012456655 457899998763 24678888888999999999999998753
No 131
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.95 E-value=3.5e-25 Score=219.20 Aligned_cols=327 Identities=15% Similarity=0.110 Sum_probs=211.4
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGVL 172 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~---~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~~~al 172 (474)
+++||..+.. .++ .+|++.+++++.......|.. ..+++.++++++.+.++ +.+ +|++|+|+++|+..++
T Consensus 1 ~~~~~~~g~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 1 RLFDFGTGDP--KEP-TPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred CeEeccCCCC--CCC-CCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 3578887742 233 478899999887654333432 34777888888876643 355 8999999999999988
Q ss_pred HHhHhhcCC----cEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 173 RLARAFTGR----ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 173 ~~ar~~~~~----~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
. .+.+. +.|++.+++|.++...+ ...|..+..++.....++ . -|++++++.+.+ +++
T Consensus 78 ~---~~~~~g~~~d~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~---------~---~d~~~l~~~~~~---~~~ 138 (350)
T TIGR03537 78 L---VFIDPEEDRRRVIFGTPGYPVYERGA-LFAGGEPTAVKLKKEDGF---------L---LRLEKVEKSILE---ETK 138 (350)
T ss_pred H---HHcCCCCCCceEEEcCCCCcchHHHH-HhcCCEEEEcccCcccCC---------c---cCHHHHHHhhhh---ccE
Confidence 7 33332 58999999998755443 334443332221111111 0 178999888764 467
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceE
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVG 323 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG 323 (474)
++++++++|++|.+.+.++ +++|.++|++||+++|+||+|..+ ..+.......++. +.++ +|||.++ +|+|+|
T Consensus 139 ~i~i~~p~NPtG~~~~~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~g~~GlRiG 216 (350)
T TIGR03537 139 IVWINYPHNPTGATAPRSY-LKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGI-ENVLAFHSLSKRSGMTGYRSG 216 (350)
T ss_pred EEEEeCCCCCcCcccCHHH-HHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCc-CCEEEEeecccccCCccccce
Confidence 7777777888998887666 999999999999999999999766 3222211111121 2222 7999997 799999
Q ss_pred EEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeecee
Q 011959 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 403 (474)
Q Consensus 324 ~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~ 403 (474)
|+++++++++.+.. .....+.+.+++++.++.+++. ++++.++.++..+..++.+.+.+.++++....+..|.+
T Consensus 217 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~ 290 (350)
T TIGR03537 217 FVAGDEKLISFLRK---LRANFGVASPDFVQAAAKAAWS---DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFY 290 (350)
T ss_pred eeecCHHHHHHHHH---HHHhhccCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEE
Confidence 99999999888763 2122233455567777766654 23333333333333333333333334443233344556
Q ss_pred EEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------CcceEEecCCcHHHHHHHHHHHHH
Q 011959 404 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
+++.+... ....++++.|.++||++.++. .+++|+++..+++++++++++|++
T Consensus 291 ~~~~~~~~-------------~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 291 LWVKVPSG-------------IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred EEEECCCC-------------CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 77776421 112578889999999998753 245788877889999999998875
No 132
>PRK09082 methionine aminotransferase; Validated
Probab=99.95 E-value=2.4e-25 Score=223.29 Aligned_cols=330 Identities=15% Similarity=0.123 Sum_probs=217.0
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMG 170 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~~~ 170 (474)
+.++||..|. +-...++.+.+++.+.++.. ..|. +..+++.++++++.+.++ ..+ ++++++|+++|+..
T Consensus 30 ~~~i~l~~g~---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~ 106 (386)
T PRK09082 30 HGAINLSQGF---PDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA 106 (386)
T ss_pred CCEEEecCCC---CCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence 3568888873 22235788999998887653 2232 245678889998887764 233 79999999999999
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (474)
+++.. ...++.|++.+++|.+.. ..+...|..+..++... .+. .-|++++++.++. ++++|
T Consensus 107 ~~~~~--~~~gd~Vli~~p~y~~~~-~~~~~~g~~~~~~~~~~-~~~------------~~d~~~l~~~~~~---~~~~v 167 (386)
T PRK09082 107 AILAL--VRPGDEVIVFDPSYDSYA-PAIELAGGRAVRVALQP-PDF------------RVDWQRFAAAISP---RTRLI 167 (386)
T ss_pred HHHHH--cCCCCEEEEeCCCchhhH-HHHHHcCCEEEEEecCc-ccc------------cCCHHHHHHhcCc---cceEE
Confidence 99842 345678888888776643 33344444332221110 010 0178899888863 46777
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC--ccccccCCCCcee---ehhhhcC-CCcceE
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYFGVTPDLT---TLGKIIG-GGLPVG 323 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~--~~~~~~g~~pdi~---t~sK~l~-~G~~iG 323 (474)
+++.++|++|.+.+..+ +++|.++|++||+++|+||+|..+ ..+.. ......+....++ +|||.++ +|+|+|
T Consensus 168 ~l~~p~NPtG~~~~~~~-~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 246 (386)
T PRK09082 168 ILNTPHNPSGTVWSAAD-MRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVG 246 (386)
T ss_pred EEeCCCCCCCcCCCHHH-HHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhh
Confidence 77777788998887666 999999999999999999999877 43321 1122223323333 7999997 899999
Q ss_pred EEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeec
Q 011959 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (474)
Q Consensus 324 ~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (474)
|+++++++++.+.. ......++.+.+++.++.+.++...+ +.+.+.++++.+.+.+.|++ .++.......|
T Consensus 247 ~iv~~~~l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~g~ 319 (386)
T PRK09082 247 YCVAPAALSAEFRK---VHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN----SRFKLLPCEGT 319 (386)
T ss_pred hhhCCHHHHHHHHH---HHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCee
Confidence 99999999988873 22334567788888887776652111 22334445555555555554 33332223445
Q ss_pred eeEEEEEecCCCcCcccccccchHHHHHHHHHH-HHCCeEecccC--------CcceEEecCCcHHHHHHHHHHHHH
Q 011959 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~--------~~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
.++++.+.+-+ .....++++.| .++||.+.|+. .+++|+++..+++++++++++|.+
T Consensus 320 ~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 320 YFQLVDYSAIS-----------DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred EEEEEeccccC-----------CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 66777764210 00125677766 47799998863 135789888899999999999875
No 133
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=2.4e-25 Score=221.94 Aligned_cols=324 Identities=15% Similarity=0.166 Sum_probs=216.5
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHh
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~a 175 (474)
++++++||.++. +++| .+|.+++++.+.+.....| +.....+|.+.++++++ ..++|++++|+++++..+++.
T Consensus 30 ~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y--~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~- 103 (367)
T PRK02731 30 GIADIIKLASNE--NPLG-PSPKAIEAIRAAADELHRY--PDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARA- 103 (367)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHHHhhcCC--CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHH-
Confidence 677899999885 5677 5788999999987654333 32223567777777775 467899999999998887773
Q ss_pred HhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011959 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
....++.|++.+++|..+.. .....|..+...+. ... ..|++++++.++. ++++|+++.+
T Consensus 104 -l~~~gd~vl~~~p~y~~~~~-~~~~~g~~~~~~~~--~~~-------------~~~~~~l~~~~~~---~~~~v~l~~p 163 (367)
T PRK02731 104 -YLGPGDEVIYSEHGFAVYPI-AAQAVGAKPVEVPA--KDY-------------GHDLDAMLAAVTP---RTRLVFIANP 163 (367)
T ss_pred -hcCCCCEEEEecCCHHHHHH-HHHHcCCeEEEecc--cCC-------------CCCHHHHHHHhCC---CCcEEEEeCC
Confidence 23346788888888865432 23333433222111 000 1178999888862 5677777777
Q ss_pred cCCCCcccCCHHHHHHHHHHHHH--hCCEEEEeccccCc-ccCC-CccccccCCCCcee---ehhhhcC-CCcceEEEEe
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGG 327 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~--~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~ 327 (474)
+|++|.+.+ .+++.++|+. +|+++|+||+|.++ ..+. ......++..++++ +|||.+| +|+|+||+++
T Consensus 164 ~nptG~~~~----~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~ 239 (367)
T PRK02731 164 NNPTGTYLP----AEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA 239 (367)
T ss_pred CCCCCcCCC----HHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeC
Confidence 888999998 4455555554 49999999999877 4332 22223333334544 7999998 7999999999
Q ss_pred cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEE
Q 011959 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (474)
Q Consensus 328 ~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (474)
++++++.+.... .+++.+++++.++.+.|+ +.++.+++++..+..++.+.+.+.++++.. .++.|.++++.
T Consensus 240 ~~~~~~~l~~~~-----~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~g~~~~i~ 310 (367)
T PRK02731 240 PPEIIDALNRVR-----QPFNVNSLALAAAVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGLEY-IPSVGNFILVD 310 (367)
T ss_pred CHHHHHHHHHcc-----CCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCcc-CCCCceEEEEE
Confidence 999998887321 245668888888877775 233344444444444444444444444332 24568888887
Q ss_pred EecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+... ....++.+.|.++||++.++. .+.+|+++. +.+++++++++|+++++.
T Consensus 311 ~~~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 311 FDDG-------------KDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLAA 366 (367)
T ss_pred CCCC-------------CCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 6321 113578889999999998863 235788875 788999999999998763
No 134
>PLN02187 rooty/superroot1
Probab=99.95 E-value=5.6e-25 Score=224.23 Aligned_cols=343 Identities=11% Similarity=0.059 Sum_probs=213.0
Q ss_pred CCCEEEeccCChhhccC----CCCCHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHhhCC---CCCeEEEeCCH
Q 011959 97 DGNEYIDYVGSWGPAII----GHADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIEMVRFVNSG 164 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~l----G~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~~~sG 164 (474)
+++.+|++..| ++. -..++++.+++.+.+..+..+.| ..++++.+++++.+.++ .+++|++|+|+
T Consensus 64 ~~~~vi~l~~G---dp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~ 140 (462)
T PLN02187 64 VNKTILPLGHG---DPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGC 140 (462)
T ss_pred CCCCeEECCCC---CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCH
Confidence 35778888777 332 22467899999988876432222 23577778887776544 57899999999
Q ss_pred HHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC
Q 011959 165 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (474)
Q Consensus 165 seA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (474)
++|+..+++. ...+++.|++.+++|.++.. .....|..+..++.....+. . -|+++|+++++.+
T Consensus 141 ~~al~~~~~~--l~~pGd~Vlv~~P~y~~y~~-~~~~~g~~~~~~~l~~~~~~---------~---~d~~~l~~~~~~~- 204 (462)
T PLN02187 141 NQGIEIVFES--LARPNANILLPRPGFPHYDA-RAAYSGLEVRKFDLLPEKEW---------E---IDLEGIEAIADEN- 204 (462)
T ss_pred HHHHHHHHHH--hcCCCCEEEEeCCCCccHHH-HHHHcCCEEEEEeCccccCC---------c---cCHHHHHHhcCCC-
Confidence 9999999994 23456889999999987533 33444544332222100000 0 1789998887632
Q ss_pred CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCcee---ehhhhcC-C
Q 011959 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLT---TLGKIIG-G 318 (474)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pdi~---t~sK~l~-~ 318 (474)
..+.++++| +|++|.+.+.++ +++|.++|++||++||+||+|..| ..+..+ ....+.-...++ +|||.++ +
T Consensus 205 -~~~v~i~nP-~NPTG~v~s~e~-l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~p 281 (462)
T PLN02187 205 -TVAMVVINP-NNPCGNVYSHDH-LKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVP 281 (462)
T ss_pred -cEEEEEeCC-CCCCCCccCHHH-HHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCc
Confidence 334455555 578898887666 999999999999999999999987 444222 111121111232 7999988 8
Q ss_pred CcceEEEEec-H-HH---HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhh
Q 011959 319 GLPVGAYGGR-R-DI---MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKK 390 (474)
Q Consensus 319 G~~iG~~~~~-~-~i---~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 390 (474)
|||+||++++ + .+ ++.+........ .+.+.+.+++.++.++|+...+ +...+.++++.+.+.+.|++
T Consensus 282 GlRiG~~v~~~p~~~~~~~~~~~~~~~~~~-~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~---- 356 (462)
T PLN02187 282 GWKIGWIALNDPEGVFETTKVLQSIKQNLD-VTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD---- 356 (462)
T ss_pred cceeEEEEecCchhHHHHHHHHHHHHHhcc-ccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh----
Confidence 9999999873 3 22 223321111111 1224478889888888863111 22334444445555555543
Q ss_pred cCCeeE--EeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHHHHH
Q 011959 391 AGHAIC--GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTI 464 (474)
Q Consensus 391 ~~~~~~--v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l 464 (474)
++.... .+..|+++++.+.......+ . ...+.+.+.+.++||.+.|+. .+++|+++...++.+++++
T Consensus 357 ~~~~~~~~~P~gg~fl~~~l~~~~~~~~-----~--~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~al 429 (462)
T PLN02187 357 IPCVVCPKKPESCTYLLTKLELSLMDNI-----K--DDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDAL 429 (462)
T ss_pred CCCCcCCCCCCEeEEEEeecChhhCCCC-----C--CHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHHH
Confidence 332221 24456777776632100000 0 011233455678899999863 3468999998999999999
Q ss_pred HHHHHHHhh
Q 011959 465 TAAEKVLRQ 473 (474)
Q Consensus 465 ~~l~~~~~~ 473 (474)
++|.+++++
T Consensus 430 ~rL~~~l~~ 438 (462)
T PLN02187 430 ERLKGFCTR 438 (462)
T ss_pred HHHHHHHHH
Confidence 999998864
No 135
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.95 E-value=5.7e-25 Score=220.64 Aligned_cols=330 Identities=14% Similarity=0.094 Sum_probs=210.5
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEAC 168 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~ 168 (474)
|..++|+..| ++--..++.+.+++.+.+... ..|+ +..+++.++++++.+.++ +.+ .+++|+|+++++
T Consensus 30 ~~~~i~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i 106 (385)
T PRK09276 30 GVDVISLGIG---DPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI 106 (385)
T ss_pred CCCEEEecCC---CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 4456787777 322225788999999887652 2232 224677788888876543 344 588899999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
..+++. ....++.|++.+++|..+.. .....|..+..++.....++. -|++++++.+.. +++
T Consensus 107 ~~~~~~--~~~~gd~Vl~~~P~y~~~~~-~~~~~g~~~~~v~~~~~~g~~------------~d~~~l~~~~~~---~~~ 168 (385)
T PRK09276 107 AHIPLA--FVNPGDVVLVPDPGYPVYKI-GTIFAGGEPYFMPLKEENGFL------------PDLDAIPEDVAK---KAK 168 (385)
T ss_pred HHHHHH--hCCCCCEEEEcCCCCcChHH-HHHHcCCEEEEEecCCCCCCc------------CCHHHHHHhccc---cce
Confidence 999884 23456789999999977543 333444433322211111110 168888777652 567
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc--ccccc---CCCCceeehhhhcC-CCcc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG--AQEYF---GVTPDLTTLGKIIG-GGLP 321 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~--~~~~~---g~~pdi~t~sK~l~-~G~~ 321 (474)
+|++++++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+... ..+.. +....+.+|||.+| +|+|
T Consensus 169 ~v~l~~p~NPtG~~~~~~~-~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlR 247 (385)
T PRK09276 169 LMFINYPNNPTGAVADLEF-FEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWR 247 (385)
T ss_pred EEEEeCCCCCCCCCCCHHH-HHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchh
Confidence 7777766788998887666 999999999999999999999877 433211 11111 11223448999998 8999
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
+||+++++++++.+.... .....+.+++.+.++.++|+..+. +...+.++++.+.+.+.|++ .++....+.
T Consensus 248 iG~~i~~~~l~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~ 320 (385)
T PRK09276 248 IGFAVGNADLIAGLGKVK---SNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK----LGLEVEPPK 320 (385)
T ss_pred heeeeCCHHHHHHHHHHH---hhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCC
Confidence 999999999998886321 112334566777777777752111 22333444444555555544 343222223
Q ss_pred eceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHH
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
.|.++++.+... ....++.+.|+ ++||++.++. ..++|+++..+++++.+++++|.+
T Consensus 321 ~~~~~~v~~~~~-------------~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 321 ATFYVWAPVPKG-------------YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred cceEEEEECCCC-------------CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 455567766321 01256777776 5799999862 246789888889999999988864
No 136
>PRK08175 aminotransferase; Validated
Probab=99.95 E-value=7e-25 Score=220.53 Aligned_cols=336 Identities=16% Similarity=0.149 Sum_probs=220.3
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEAC 168 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~ 168 (474)
|++++||..+ ++.+..++.+.+++.+.+.... .|+ +..+++.++++++.+.++ ..+ ++++|+|+++++
T Consensus 28 ~~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMG---NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 4566788777 5666567778888887765422 232 234677888888876543 345 799999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
..+++. ....+++|++.+++|......+ ...|..+..++. ..+ ..+.++++++++...++++
T Consensus 105 ~~~~~~--~~~~gd~Vlv~~P~y~~~~~~~-~~~g~~~~~v~~--~~~-------------~~~~~~l~~~l~~~~~~~~ 166 (395)
T PRK08175 105 AHLMLA--TLDHGDTVLVPNPSYPIHIYGA-VIAGAQVRSVPL--VEG-------------VDFFNELERAIRESYPKPK 166 (395)
T ss_pred HHHHHH--hCCCCCEEEEcCCCCcchHHHH-HHcCCeEEEEec--ccC-------------CCcHHHHHHHHhhccCCce
Confidence 988774 2345678888888887654433 233332211111 000 0147888888875444677
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCC--CCc----eeehhhhcC-CCc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV--TPD----LTTLGKIIG-GGL 320 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~--~pd----i~t~sK~l~-~G~ 320 (474)
+|+++.++|++|.+.+.++ +++|.++|++||++||+||+|..+ ..+.... ....+ ..| +.+|||.+| +|+
T Consensus 167 ~v~i~~p~NPtG~~~~~~~-~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~pGl 244 (395)
T PRK08175 167 MMILGFPSNPTAQCVELEF-FEKVVALAKRYDVLVVHDLAYADIVYDGWKAP-SIMQVPGAKDVAVEFFTLSKSYNMAGW 244 (395)
T ss_pred EEEEeCCCCCCCCCCCHHH-HHHHHHHHHHcCcEEEEecchHhhccCCCCCc-chhcCCCcccCEEEEeeccccccCcch
Confidence 8887766788898887666 899999999999999999999877 4332111 11111 122 237999997 899
Q ss_pred ceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEe
Q 011959 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 398 (474)
Q Consensus 321 ~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 398 (474)
|+||+++++++++.+.+ ......++.+.+.+.++.++|+..+. +.+.+.++++.+.+.+.|++ +++....+
T Consensus 245 RiG~~~~~~~l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~p 317 (395)
T PRK08175 245 RIGFMVGNPELVSALAR---IKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE----AGWMVEMP 317 (395)
T ss_pred hheeeeCCHHHHHHHHH---HHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCC
Confidence 99999999999998763 22223456677788888777753211 22334444444555555544 34333334
Q ss_pred eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 399 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 399 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
..|+++++++.+.. . .....++++.++ ++||.+.|+. .+++|+++..+++.+.+++++|.+++
T Consensus 318 ~~g~~i~i~l~~~~-~---------~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 318 KASMYVWAKIPEPY-A---------AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMF 387 (395)
T ss_pred CEEEEEEEECCccc-C---------CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 56888888875321 0 001256777666 6799998862 23678888888999999999999988
Q ss_pred hh
Q 011959 472 RQ 473 (474)
Q Consensus 472 ~~ 473 (474)
++
T Consensus 388 ~~ 389 (395)
T PRK08175 388 RA 389 (395)
T ss_pred Hh
Confidence 65
No 137
>PRK12414 putative aminotransferase; Provisional
Probab=99.95 E-value=7.5e-25 Score=219.40 Aligned_cols=329 Identities=13% Similarity=0.122 Sum_probs=215.3
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC-C---CCeEEEeCCHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP-S---IEMVRFVNSGTEACMGV 171 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~---~~~~~~~~la~~l~~~~~-~---~~~v~~~~sGseA~~~a 171 (474)
.+|||..|. ..++ .++.+.+++.+.+... ..|+ +..++++++++++.++++ . .+++++++|+++++..+
T Consensus 30 ~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~ 106 (384)
T PRK12414 30 DALNLSQGA--PNFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA 106 (384)
T ss_pred CeEEcCCCC--CCCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH
Confidence 467888774 2333 4888999998877653 2332 235778889999888765 2 25799999999999999
Q ss_pred HHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE
Q 011959 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (474)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (474)
++. ...++++|++.+++|.++.. .....|..+..++... .+. . -|++.|++.++. ++++|+
T Consensus 107 ~~~--l~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~v~~~~-~~~---------~---~d~~~l~~~l~~---~~~~v~ 167 (384)
T PRK12414 107 ISA--LVHPGDEVIYFEPSFDSYAP-IVRLQGATPVAIKLSP-EDF---------R---VNWDEVAAAITP---RTRMII 167 (384)
T ss_pred HHH--hcCCCCEEEEeCCCccchHH-HHHHcCCEEEEEecCc-ccc---------c---cCHHHHHhhcCc---ccEEEE
Confidence 984 24566889999999876433 3333343322211110 010 0 178899888863 567777
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc--cccccCCCCcee---ehhhhcC-CCcceEE
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG--AQEYFGVTPDLT---TLGKIIG-GGLPVGA 324 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~--~~~~~g~~pdi~---t~sK~l~-~G~~iG~ 324 (474)
++.++|++|.+.+..+ +++|.++|++||+++|+||+|..| ..+... ...+.+....++ +|||.++ +|+|+||
T Consensus 168 i~~p~NPTG~~~s~~~-~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~ 246 (384)
T PRK12414 168 VNTPHNPSATVFSAAD-LARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGY 246 (384)
T ss_pred EcCCCCCCCcCCCHHH-HHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEE
Confidence 7777788998887555 999999999999999999999877 433211 111122222333 7999998 8999999
Q ss_pred EEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeecee
Q 011959 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 403 (474)
Q Consensus 325 ~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~ 403 (474)
+++++++++.+.. .....+++.+.+++.++.+.|+.-.. ....+.++++++.+.+.|++ +++....+..|.+
T Consensus 247 ~v~~~~l~~~l~~---~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~~~~gg~~ 319 (384)
T PRK12414 247 CLAPAELMDEIRK---VHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAG----SRFELLPSEGSFF 319 (384)
T ss_pred EecCHHHHHHHHH---HHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHh----CCCeecCCCcceE
Confidence 9999999888763 22334677788898888877752111 12344555555556555554 3432222334455
Q ss_pred EEEEEecCCCcCcccccccchHHHHHHH-HHHHHCCeEecccC--------CcceEEecCCcHHHHHHHHHHHHH
Q 011959 404 FGFFFTEGPVYNFEDAKKSETTKFARFY-RGMLEEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~~--------~~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
+++.+.... +.. ..++. +.|.++||.+.|+. .+++|+++..+++++++++++|.+
T Consensus 320 ~~~~~~~~~----------~~~-~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 320 MLARFRHFS----------DES-DSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred EEEcccccC----------CCC-HHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 555553210 000 13444 55668899998863 245889888899999999999864
No 138
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.95 E-value=7.7e-25 Score=219.41 Aligned_cols=331 Identities=18% Similarity=0.137 Sum_probs=215.4
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVL 172 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al 172 (474)
.++||..|. ..+. .++.+.+++.+.+... ..|+ +..++++.+++++.+.++ ..+++++|+|+++|+..++
T Consensus 30 ~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~ 106 (384)
T PRK06348 30 DIIDLSLGD--PDLI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLAL 106 (384)
T ss_pred CcEEcCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHH
Confidence 468888773 2233 4677877666655432 2333 234677788888876543 5789999999999999999
Q ss_pred HHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEE
Q 011959 173 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 252 (474)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ 252 (474)
+.. ..+++.|++.+++|.++...+. ..|..+..++.....+. . -|+++|++.++. ++++|++
T Consensus 107 ~~~--~~~gd~vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~---------~---~d~~~l~~~~~~---~~~~v~l 168 (384)
T PRK06348 107 QSI--LDPGDEVIIHEPYFTPYKDQIE-MVGGKPIILETYEEDGF---------Q---INVKKLEALITS---KTKAIIL 168 (384)
T ss_pred HHh--cCCCCEEEEeCCCCcchHHHHH-HcCCEEEEecCCcCcCC---------c---CCHHHHHHhhCc---CccEEEE
Confidence 842 3446788888888877544433 33432222111001111 0 178999988863 4566666
Q ss_pred ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccc-cccCCCCce---eehhhhcC-CCcceEEEE
Q 011959 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ-EYFGVTPDL---TTLGKIIG-GGLPVGAYG 326 (474)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~-~~~g~~pdi---~t~sK~l~-~G~~iG~~~ 326 (474)
+.++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+..... ...+..+.+ .+|||.++ +|+|+||++
T Consensus 169 ~~p~NPtG~~~s~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v 247 (384)
T PRK06348 169 NSPNNPTGAVFSKET-LEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVI 247 (384)
T ss_pred eCCCCCCCcCCCHHH-HHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeee
Confidence 666788898886555 999999999999999999999988 43321111 111222233 37999999 899999999
Q ss_pred ecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeE
Q 011959 327 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 404 (474)
Q Consensus 327 ~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~ 404 (474)
+++++++.+. ......+++.+++++.++..+|+..++ +.+.+.++++.+.+.+.|+++ . ++....+..|.++
T Consensus 248 ~~~~~~~~~~---~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~-~--~~~~~~p~gg~~~ 321 (384)
T PRK06348 248 APDYIIETAK---IINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESI-P--NLSLHPPKGSIYA 321 (384)
T ss_pred cCHHHHHHHH---HHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CceeccCCeeEEE
Confidence 9999988876 233344677889999998888863221 233444455555555555542 1 2222223345566
Q ss_pred EEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHH
Q 011959 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
|+.+..... ...++++.|+ ++||.+.|+. ...+|+++..+++++++++++|.+.
T Consensus 322 ~~~~~~~~~------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 322 FINIKKTGL------------SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEecccCCC------------CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 777642110 1256777776 5699998763 2467888888999999999999764
No 139
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.95 E-value=8.5e-25 Score=219.22 Aligned_cols=330 Identities=14% Similarity=0.109 Sum_probs=212.4
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCCCC---CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFGA---PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEAC 168 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~---~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~ 168 (474)
|..++||..|. ..++ .++.+.+++.+.+... ..|+. ..+++.++++++.+.++ ..+ .|++|+|+++++
T Consensus 28 ~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l 104 (383)
T TIGR03540 28 GVDVISLGIGD--PDLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGI 104 (383)
T ss_pred CCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHH
Confidence 44667777773 2333 4788999998877642 22322 24677888888876543 334 689999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
..+++. ....++.|++.+++|.++... ....|..+..++.....++ . -|++++++.+.. +++
T Consensus 105 ~~~~~~--~~~~gd~vlv~~P~y~~~~~~-~~~~G~~v~~v~~~~~~g~---------~---~d~~~l~~~~~~---~~~ 166 (383)
T TIGR03540 105 AHIPLA--FVNPGDIVLVPDPGYPVYRIG-TLFAGGEPYEMPLKEENGF---------L---PDFDAIPEDIAK---KAK 166 (383)
T ss_pred HHHHHH--hCCCCCEEEEeCCCCcchHHH-HHhcCCEEEEEecCcccCC---------c---cCHHHHHhhccc---cce
Confidence 999984 234567889989999875443 3344443332221111111 0 178888877753 567
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC-cc-ccccCC---CCceeehhhhcC-CCcc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GA-QEYFGV---TPDLTTLGKIIG-GGLP 321 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~-~~~~g~---~pdi~t~sK~l~-~G~~ 321 (474)
+|+++.++|++|.+.+.++ +++|.++|++||++||+||+|..+ ..+.. .. ....+. ...+.+|||.+| +|+|
T Consensus 167 ~v~i~~P~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlR 245 (383)
T TIGR03540 167 LMFINYPNNPTGAVAPLKF-FKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWR 245 (383)
T ss_pred EEEEeCCCCCcCccCCHHH-HHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccce
Confidence 7777755788998887666 999999999999999999999877 43321 11 111111 122348999998 8999
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
+||+++++++++.+... ......+.+.+.+.++.++|+...+ ++..+.++++.+.+.+.|++ +++....+.
T Consensus 246 iG~~i~~~~l~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~ 318 (383)
T TIGR03540 246 IGMAVGNADLIAGLGKV---KTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKK----IGIDVEKPK 318 (383)
T ss_pred eeEEeCCHHHHHHHHHH---HHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEecCCC
Confidence 99999999998887631 1122334566777777777753211 22333444444555555543 443332333
Q ss_pred eceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHH
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
.|.++++.+.+. ....++.+.|+ ++||.+.++. .+.+|+++..+++++++++++|.+
T Consensus 319 ~~~~~~~~l~~~-------------~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 319 ATFYVWVPVPEG-------------YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred cceEEEEECCCC-------------CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 455677776421 11256777775 6799999862 246889888899999999988864
No 140
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.95 E-value=3.5e-25 Score=217.12 Aligned_cols=301 Identities=13% Similarity=0.141 Sum_probs=206.7
Q ss_pred ccCCC-CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcC-CcEEEEE
Q 011959 111 AIIGH-ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG-RERIIKF 187 (474)
Q Consensus 111 ~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~-~~~ii~~ 187 (474)
+|||. .||+|+++..+.+++. +++.++..+|.++++++++ ..+.+++++||++|+..++. ++.+ ++.|++.
T Consensus 28 ~ylgl~~~~~~~~~~~~~~~~~---~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~---al~~~gd~Vli~ 101 (346)
T TIGR03576 28 DLTGLAGGFKIDEEDLELLETY---VGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATIL---ALEPPGRKVVHY 101 (346)
T ss_pred ccccCCCChhHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHH---HhCCCCCEEEEC
Confidence 77888 5999999999998873 4577899999999999996 45899999999999999998 4544 4566653
Q ss_pred --eCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCC
Q 011959 188 --EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 265 (474)
Q Consensus 188 --~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~ 265 (474)
+..+|......+...|.. . +.++|+++++. . +++++|++++ .+++|.+.+.
T Consensus 102 ~~d~p~~~s~~~~~~l~ga~-------------------~--~~~~~l~~l~~----~-~~~~lIiitg-~s~~G~v~~~ 154 (346)
T TIGR03576 102 LPEKPAHPSIPRSCKLAGAE-------------------Y--FESDELSELKK----I-DGTSLVVITG-STMDLKVVSE 154 (346)
T ss_pred CCCCCCchhHHHHHHHcCCE-------------------E--eccCCHHHHhh----C-cCceEEEEEC-CCCCCcccCH
Confidence 335666655555444431 1 12346665432 1 2456777776 4778888765
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCc--c-cCCCccccccCCCCcee--ehhhhcCCCcceEEEEecHHHHHhhcCCCC
Q 011959 266 PDFLNAIRRITKENGALLIFDEVMTGF--R-LAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 340 (474)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~--r-~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~ 340 (474)
++ |++|.++|++||++||+||+|..+ . .+. +....++ +|++ ||||++ +|+|+||+++++++++.+.+...
T Consensus 155 ~~-L~~i~~la~~~~~~livDEAy~~~~~~~~~~-~~~~~~~--~divv~s~SKal-aG~r~G~v~~~~~li~~l~~~~~ 229 (346)
T TIGR03576 155 ED-LKRVIKQAKSKEAIVLVDDASGARVRRLYGQ-PPALDLG--ADLVVTSTDKLM-DGPRGGLLAGRKELVDKIKSVGE 229 (346)
T ss_pred HH-HHHHHHHHHHcCCEEEEECCccccccccCCC-CCHHHcC--CcEEEeccchhc-cccceEEEEeCHHHHHHHHHhhc
Confidence 55 999999999999999999999543 1 122 1222333 4544 799966 47899999999999998875332
Q ss_pred cccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCccccc
Q 011959 341 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 420 (474)
Q Consensus 341 ~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~ 420 (474)
.+ .++.+++.++++.++|+.+..+...+.++++.+.+++.+++ ..+. +..++|+++.+...
T Consensus 230 ~~---~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~----~~~~---~~~~~f~~~~~~~~--------- 290 (346)
T TIGR03576 230 QF---GLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK----LNVE---RTPTGFVIKGVEEE--------- 290 (346)
T ss_pred Cc---ccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----CCCC---cCCCeEEEEeCCCC---------
Confidence 22 33468889999999998654344566666776666666653 2221 22344656554210
Q ss_pred ccchHHHHHHHHHHHHCCeEecccC-----CcceEEecCCcHH---HHHHHHHHHHHHHh
Q 011959 421 KSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSD---DIQHTITAAEKVLR 472 (474)
Q Consensus 421 ~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~~~~~~t~e---~i~~~l~~l~~~~~ 472 (474)
+ ..+.+.+.|.++||++.|+. .+++|+++...++ +++.++++|++.++
T Consensus 291 --~--~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 291 --K--LIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSLK 346 (346)
T ss_pred --C--HHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhccC
Confidence 0 11344566678899999853 3467888887766 89999999988653
No 141
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.94 E-value=2.2e-25 Score=231.10 Aligned_cols=341 Identities=11% Similarity=0.061 Sum_probs=212.1
Q ss_pred cCCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHH
Q 011959 96 IDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVP---SIEMVRFVNSGTEAC 168 (474)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~ 168 (474)
..|+.+|+|..|-. +++|. .++++++++.+.+.....|+. ..++++++++++..... ..++|++++|+++++
T Consensus 143 ~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal 221 (517)
T PRK13355 143 AAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELI 221 (517)
T ss_pred HcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHH
Confidence 35778899988722 34565 478899999888765443432 24566777777655432 468999999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
..+++. ....++.|++.+++|..+...+ ...|..+..+......++ .-|++++++.+.. +++
T Consensus 222 ~~~~~~--l~~~Gd~Vli~~P~y~~y~~~~-~~~g~~~v~~~~~~~~~~------------~~d~~~l~~~~~~---~~k 283 (517)
T PRK13355 222 NLSMSA--LLDDGDEVLIPSPDYPLWTACV-NLAGGTAVHYRCDEQSEW------------YPDIDDIRSKITS---RTK 283 (517)
T ss_pred HHHHHH--hCCCCCEEEEcCCCCcCHHHHH-HHCCCEEEEeecCcccCC------------CCCHHHHHHhcCc---Cce
Confidence 999984 2345688999999998765433 333433222111100010 0178999988763 456
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCce-----eehhhhcC-CCcc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL-----TTLGKIIG-GGLP 321 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi-----~t~sK~l~-~G~~ 321 (474)
+|++..++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+.... ......+|+ -+|||.++ +|||
T Consensus 284 ~i~i~nP~NPTG~v~~~~~-l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~-s~~~~~~~~~vi~~~S~SK~~~~~G~R 361 (517)
T PRK13355 284 AIVIINPNNPTGALYPREV-LQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT-SIASLAPDLFCVTFSGLSKSHMIAGYR 361 (517)
T ss_pred EEEEECCCCCCCcCcCHHH-HHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc-cHHHhCCCCeEEEEecchhhccCcccc
Confidence 6655555788998887555 999999999999999999999888 5442211 111122442 26899997 7999
Q ss_pred eEEEEe--cHHH----HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHH---HHHHHHHHHHHHHHHHhhhc
Q 011959 322 VGAYGG--RRDI----MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYE---YLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 322 iG~~~~--~~~i----~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~---~~~~~~~~l~~~L~~~~~~~ 391 (474)
+||+++ ++++ ++.+.. .....++.|.+++.++.++|+.... +++.+ ++.++++++.+.|+ +.
T Consensus 362 iG~~i~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~ 433 (517)
T PRK13355 362 IGWMILSGNKRIAKDYIEGLNM----LANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALN----AI 433 (517)
T ss_pred eEEEEeeCchhhHHHHHHHHHH----HhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHh----cC
Confidence 999984 4543 333321 1112345678888888888852111 12222 22233344444443 33
Q ss_pred CCeeEEeeecee-EEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------CcceEEecCCcHHHHHHHH
Q 011959 392 GHAICGGYISGM-FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTI 464 (474)
Q Consensus 392 ~~~~~v~~~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l 464 (474)
+......+.|.| +++.+..... +. .+ ....+.+.|.++||.+.|+. .+++|+++..++++|++++
T Consensus 434 ~g~~~~~p~g~fy~~~~l~~~~~-~~-----~~--~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~ 505 (517)
T PRK13355 434 PGISAVKPKAAFYIFPKIDVKKF-NI-----HD--DEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAM 505 (517)
T ss_pred CCcccCCCCeeeEEEeecCcccC-CC-----CC--HHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHH
Confidence 222233445555 4445532100 00 01 11234456678899998862 3467899989999999999
Q ss_pred HHHHHHHhh
Q 011959 465 TAAEKVLRQ 473 (474)
Q Consensus 465 ~~l~~~~~~ 473 (474)
++|.++++.
T Consensus 506 ~rl~~~~~~ 514 (517)
T PRK13355 506 DRLADFFSY 514 (517)
T ss_pred HHHHHHHHH
Confidence 999998864
No 142
>PRK06855 aminotransferase; Validated
Probab=99.94 E-value=1.1e-24 Score=220.96 Aligned_cols=351 Identities=17% Similarity=0.138 Sum_probs=207.3
Q ss_pred CCEEEeccCChhhccC--CC-CCHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHH
Q 011959 98 GNEYIDYVGSWGPAII--GH-ADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTE 166 (474)
Q Consensus 98 G~~~iD~~~~~~~~~l--G~-~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGse 166 (474)
|+.++++..| ++. +. .++.+.+++.+.+.+.. .|+ +..++++.+++++.+.++ .+++|++|+|+++
T Consensus 31 g~~~~~~~~G---~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~ 107 (433)
T PRK06855 31 GVKITWENIG---DPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGD 107 (433)
T ss_pred cccccccccC---CCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHH
Confidence 3344555444 332 33 57788888888775432 222 245778888888877643 5689999999999
Q ss_pred HHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCC
Q 011959 167 ACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGE 246 (474)
Q Consensus 167 A~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 246 (474)
|+..++. ....++.|++.+++|+++........|..+..++.....++ .-|+++|++.++.++ +
T Consensus 108 al~~~~~---l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~------------~~d~~~l~~~~~~~~-~ 171 (433)
T PRK06855 108 AIAKIYG---LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNW------------YPDLDDLENKVKYNP-S 171 (433)
T ss_pred HHHHHHH---hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCC------------CCCHHHHHHHHhcCC-C
Confidence 9988875 34567889999999998543222222322221111100111 017899999987532 3
Q ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-c-ccccC--CCCceeehhhhcC-CCc
Q 011959 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-A-QEYFG--VTPDLTTLGKIIG-GGL 320 (474)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~-~~~~g--~~pdi~t~sK~l~-~G~ 320 (474)
++++++..++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+... . .+... ...-+.+|||.++ +||
T Consensus 172 ~~~i~l~~P~NPTG~~~s~~~-~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGl 250 (433)
T PRK06855 172 IAGILLINPDNPTGAVYPKEI-LREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGS 250 (433)
T ss_pred ceEEEEECCCCCCCcCCCHHH-HHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcc
Confidence 455554445788898887666 999999999999999999999988 544221 1 11111 0111237999998 899
Q ss_pred ceEEEEec-----H---HHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc-
Q 011959 321 PVGAYGGR-----R---DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA- 391 (474)
Q Consensus 321 ~iG~~~~~-----~---~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~- 391 (474)
|+||++++ + ++++.+.. ... ...+.+.+++.++.++|+.-.-+++.+++++..+.-++.+.+.+.++
T Consensus 251 RiG~ii~p~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~ 326 (433)
T PRK06855 251 RCGWIEVYNADKDEVFKKYINSILN---AKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVP 326 (433)
T ss_pred eEEEEEEeCCchhhHHHHHHHHHHH---hhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999872 2 23343321 111 23456788888888777521102223222222222223333333333
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccccc---cch------------HHHHHHH-HHHHHCCeEecccCC-----cceE
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKK---SET------------TKFARFY-RGMLEEGVYFAPSQF-----EAGF 450 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~---~~~------------~~~~~~~-~~l~~~Gv~v~~~~~-----~~~~ 450 (474)
++....+..|.++|+.+.+..... ..... ++. ....+++ ..+.++||.+.|+.. ..+|
T Consensus 327 ~~~~~~p~gg~~~w~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~R 405 (433)
T PRK06855 327 GLKVNRTNGAFYMTVVFEDGVLNN-KQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFR 405 (433)
T ss_pred CeeccCCCeeEEEeeccccccccc-cccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceE
Confidence 222223445677787774320000 00000 000 0123455 445678999998731 2578
Q ss_pred EecCC-cHHHHHHHHHHHHHHHhh
Q 011959 451 TSLAH-SSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 451 ~~~~~-t~e~i~~~l~~l~~~~~~ 473 (474)
++++. ++++|++++++|.+++++
T Consensus 406 ls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 406 VTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EEECCCcHHHHHHHHHHHHHHHHH
Confidence 88774 999999999999998865
No 143
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=7.4e-25 Score=220.14 Aligned_cols=339 Identities=14% Similarity=0.066 Sum_probs=216.6
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGV 171 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~a 171 (474)
..+|||..|. ..++ .++.+.+++.+.+.... .|+ +..++++++++++.+.++ ..+++++++|+++|+..+
T Consensus 33 ~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (391)
T PRK08361 33 ENVISLGIGE--PDFD-TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLA 109 (391)
T ss_pred cCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHH
Confidence 3568887774 2333 36889999888776532 232 234667777777765543 468999999999999999
Q ss_pred HHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE
Q 011959 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (474)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (474)
++. ....++.|++.+++|.+.. ..+...|..+..++.....+. ..|++++++.++. ++++++
T Consensus 110 ~~~--l~~~g~~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~------------~~d~~~l~~~i~~---~~~~v~ 171 (391)
T PRK08361 110 FES--LLEEGDEVIIPDPAFVCYV-EDAKIAEAKPIRIPLREENEF------------QPDPDELLELITK---RTRMIV 171 (391)
T ss_pred HHH--hcCCCCEEEEcCCCCcccH-HHHHHcCCEEEEEecCCccCC------------CCCHHHHHHhccc---ccEEEE
Confidence 884 2345677888888887753 334444443332221110000 0178999888864 456666
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC-ccccccCCCCce--eehhhhcC-CCcceEEEE
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDL--TTLGKIIG-GGLPVGAYG 326 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pdi--~t~sK~l~-~G~~iG~~~ 326 (474)
++.++|++|.+.+.++ +++|.++|++|+++||+||+|..| ..+.. .....+....++ .+|||.++ +|+|+||++
T Consensus 172 i~~p~NPtG~~~~~~~-~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~ 250 (391)
T PRK08361 172 INYPNNPTGATLDKEV-AKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVI 250 (391)
T ss_pred EeCCCCCCCcCcCHHH-HHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhc
Confidence 6666788998887655 899999999999999999999877 43321 111111111223 37999999 899999999
Q ss_pred ecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc-CCeeEEeeeceeEE
Q 011959 327 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFG 405 (474)
Q Consensus 327 ~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~v~~~g~~~~ 405 (474)
+++++++.+.. .....+++.+.+.+.++..+|+.....+..+++++..+..++.+.+.+..+ ++....+..|.++|
T Consensus 251 ~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~ 327 (391)
T PRK08361 251 APEQVIKDMIK---LHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVF 327 (391)
T ss_pred cCHHHHHHHHH---HHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEE
Confidence 99999887752 222234566778888887777532112233444333333333333333333 22222233455677
Q ss_pred EEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 406 FFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 406 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
+.+..... ...++.+.|+ ++||.+.|+. ..++|+++..+++++++++++|.++++++
T Consensus 328 ~~l~~~~~------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~~ 391 (391)
T PRK08361 328 ANIDETGM------------SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEEL 391 (391)
T ss_pred EECCCCCC------------CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhcC
Confidence 77642110 1246777776 5799998863 24678888889999999999999998764
No 144
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=5.3e-25 Score=219.03 Aligned_cols=320 Identities=15% Similarity=0.082 Sum_probs=210.5
Q ss_pred cCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEE-eCCHHHHHHHHHH
Q 011959 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRF-VNSGTEACMGVLR 173 (474)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~-~~sGseA~~~al~ 173 (474)
.+++++|||..|. +++| .+|.+++++.+.+.....| +.....+|.+.++++++ ..+++++ ++|.++++..+++
T Consensus 31 ~~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~y--~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~ 105 (361)
T PRK00950 31 IDPESIIKLGSNE--NPLG-PSPKAVEAIEKELSKIHRY--PEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMR 105 (361)
T ss_pred CCccceEEccCCC--CCCC-CCHHHHHHHHHHHHhhcCC--CCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHH
Confidence 4567899998874 4566 6889999998877653333 33334677777877775 4678888 6777788888887
Q ss_pred HhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEc
Q 011959 174 LARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE 253 (474)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~e 253 (474)
. ...+++.|++.+++|..+.. .....|..+...+.....+ .|++++++.+.. ++++++++
T Consensus 106 ~--~~~~gd~vlv~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~--------------~~~~~l~~~~~~---~~~~v~~~ 165 (361)
T PRK00950 106 T--FIDPGDEVIIPTPTFSYYEI-SAKAHGAKPVYAKREEDFS--------------LDVDSVLNAITE---KTKVIFLC 165 (361)
T ss_pred H--hcCCCCEEEEcCCChHHHHH-HHHHcCCEEEEeecCCCCC--------------cCHHHHHHHhcc---CCCEEEEe
Confidence 4 23445778888888765432 3333344332211110001 178889887753 45666666
Q ss_pred cccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCcc-ccccCCCCceeehhhhcC-CCcceEEEEecHHH
Q 011959 254 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGA-QEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDI 331 (474)
Q Consensus 254 p~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~-~~~~g~~pdi~t~sK~l~-~G~~iG~~~~~~~i 331 (474)
.++|++|.+.+ .+++.++|+++|+++|+||+|.+|....... ...++-...+.+|||.+| +|+|+||+++++++
T Consensus 166 ~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~ 241 (361)
T PRK00950 166 TPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWL 241 (361)
T ss_pred CCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHH
Confidence 66788999999 7789999999999999999998773111111 111111112238999998 89999999999999
Q ss_pred HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecC
Q 011959 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 411 (474)
Q Consensus 332 ~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~ 411 (474)
++.+... ..+++.++++++++.++|+ +.+++++..+..+..++.|.+.+. + ...+..|.++++.+...
T Consensus 242 ~~~~~~~-----~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~---~-~~~~~~~~~i~~~~~~~ 309 (361)
T PRK00950 242 IDYYMRA-----KTPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP---F-KVYPSEANFVLVDVTPM 309 (361)
T ss_pred HHHHHHh-----cCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC---e-eECCCcceEEEEECCCC
Confidence 9887632 2245567888888777774 334444444444444544444322 1 11234567777776210
Q ss_pred CCcCcccccccchHHHHHHHHHHHHCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 412 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
...++++.|.++||++.++. ...+|+++. +.+++++++++|++++
T Consensus 310 --------------~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 310 --------------TAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred --------------CHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 12578889999999998742 235788876 7789999999999876
No 145
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=218.03 Aligned_cols=331 Identities=14% Similarity=0.100 Sum_probs=213.9
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCCCC---CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFGA---PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEAC 168 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~---~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~ 168 (474)
|+.++||..+ ++.+..++.+.+++.+.+... ..|+. ..+++.++++++.+.++ ..+ .+++|+|+++|+
T Consensus 34 g~~~i~l~~g---~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al 110 (394)
T PRK05942 34 GLDLIDLGMG---NPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL 110 (394)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH
Confidence 4567888877 555555677888887777542 22321 24678888888876643 355 588999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
..++.. ....++.|++.+++|.+..... ...|..+..++.....++ . -|++++++.+.. +++
T Consensus 111 ~~~~~~--~~~~gd~Vlv~~P~y~~~~~~~-~~~g~~~~~v~~~~~~~~---------~---~d~~~l~~~~~~---~~k 172 (394)
T PRK05942 111 THLALA--YVNPGDVVLVPSPAYPAHFRGP-LIAGAQIYPIILKPENDW---------L---IDLSSIPEEVAQ---QAK 172 (394)
T ss_pred HHHHHH--hCCCCCEEEEcCCCCcchHHHH-HHcCCEEEEeecCCccCC---------c---cCHHHHHHhccc---cce
Confidence 999884 2455678999999998754433 333433222111100010 0 178888887752 567
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC-ccc-ccc---CCCCceeehhhhcC-CCcc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ-EYF---GVTPDLTTLGKIIG-GGLP 321 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~-~~~---g~~pdi~t~sK~l~-~G~~ 321 (474)
+|++..++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+.. ... +.. +....+.+|||.++ +|+|
T Consensus 173 ~i~l~~P~NPtG~~~s~~~-~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlR 251 (394)
T PRK05942 173 ILYFNYPSNPTTATAPREF-FEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWR 251 (394)
T ss_pred EEEEcCCCCCCCCcCCHHH-HHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhh
Confidence 7777766788998887666 999999999999999999999877 43321 111 111 11223447999997 8999
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
+||+++++++++.+.. ......++.+.+++.++.++|+..++ ++..++++++.+++.+.|++ .++....+.
T Consensus 252 iG~i~~~~~l~~~l~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~ 324 (394)
T PRK05942 252 VGFVVGNRHIIQGLRT---LKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE----LGWNIPPTK 324 (394)
T ss_pred eeeeecCHHHHHHHHH---HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCC
Confidence 9999999999998873 22222456677788888888863221 23444455555555555543 343322233
Q ss_pred eceeEEEEEecCCCcCcccccccchHHHHHHHHH-HHHCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHH
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG-MLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
.|.++|+.+.... + ..++... +.++||.+.++. .+++|+++..+.+.+.+++++|.++
T Consensus 325 ~~~f~~~~~~~~~----------~---~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 325 ATMYLWVPCPVGM----------G---STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred eeeEEEEECCCCC----------C---HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 4557777764210 0 1345544 457899998752 2467888877778888888887664
No 146
>PRK07683 aminotransferase A; Validated
Probab=99.94 E-value=3.5e-24 Score=214.83 Aligned_cols=333 Identities=15% Similarity=0.098 Sum_probs=214.9
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMG 170 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~~~ 170 (474)
..++||..+. +.-..++.+.+++.+.++.. ..|+ +..+++.++++++.+.++ +.+ +|++|+|+++|+..
T Consensus 28 ~~~i~l~~~~---p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQ---PDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCC---CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 4567887773 22224688999999988753 2232 245777888888876543 456 89999999999999
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (474)
+++. ....++.|++..++|.++... ....|..+..++.. ..++ . -|.+++++.+.. +++++
T Consensus 105 ~~~~--l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~~~~~-~~~~-----------~-~~~~~l~~~~~~---~~~~i 165 (387)
T PRK07683 105 AFRT--ILEPGTEVILPAPIYPGYEPI-IRLCGAKPVFIDTR-STGF-----------R-LTAEALENAITE---KTRCV 165 (387)
T ss_pred HHHH--hCCCCCEEEEcCCCccchHHH-HHHcCCEEEEeecC-cccC-----------C-CCHHHHHHhcCc---CceEE
Confidence 9885 234567888888888875433 33344433221110 0111 0 167888887763 45667
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCce---eehhhhcC-CCcceEE
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDL---TTLGKIIG-GGLPVGA 324 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pdi---~t~sK~l~-~G~~iG~ 324 (474)
++..++|++|.+.+..+ +++|.++|+++|++||+||+|..+ ..+... ..++.+...++ .+|||.++ +|+|+||
T Consensus 166 ~i~~p~NPtG~~~s~~~-~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~ 244 (387)
T PRK07683 166 VLPYPSNPTGVTLSKEE-LQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGF 244 (387)
T ss_pred EEeCCCCCCCcCCCHHH-HHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEE
Confidence 77666788998887666 999999999999999999999877 433221 12221222222 37999999 8999999
Q ss_pred EEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeece
Q 011959 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 402 (474)
Q Consensus 325 ~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~ 402 (474)
+++++++++.+.. .......+.+.+++.++.+.|+.... +..+++++++.+.+.+.|.+ .++....+..|.
T Consensus 245 i~~~~~l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~ 317 (387)
T PRK07683 245 LFAPSYLAKHILK---VHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS----MGLDVEKPTGAF 317 (387)
T ss_pred EEcCHHHHHHHHH---HHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCeeE
Confidence 9999999888763 11222344567788888777753211 22334444555555555544 343322333455
Q ss_pred eEEEEEecCCCcCcccccccchHHHHHHHHH-HHHCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRG-MLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+++..+..... ...++... +.++||.+.|+. .+++|+++..+++++.+++++|.+++++
T Consensus 318 ~~~~~~~~~~~------------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 318 YLFPSIGHFTM------------SSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred EEEEecccCCC------------CHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 55555432110 01345544 567899998863 2467899888999999999999998764
No 147
>PRK05839 hypothetical protein; Provisional
Probab=99.94 E-value=6.6e-25 Score=218.93 Aligned_cols=325 Identities=11% Similarity=0.043 Sum_probs=210.4
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGV 171 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~a 171 (474)
|+.++||..|. .+++ .++.+.+++.+.......|. +..++++++++++.++++ ..++|++|+|+++|+..+
T Consensus 23 ~~~~i~l~~~~--p~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~ 99 (374)
T PRK05839 23 EYKGLDLTIGE--PQFE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNF 99 (374)
T ss_pred CCCeEEcCCCC--CCCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHH
Confidence 78899998875 3345 46888888887664433343 235778888988888754 578999999999999888
Q ss_pred HHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE
Q 011959 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (474)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (474)
++....-.+++.|++..++|..+...+ ...|..+..++.....++ .. |++.. .++ ++++|+
T Consensus 100 ~~~~~~~~~gd~vlv~~P~y~~~~~~~-~~~g~~v~~v~~~~~~~~---------~~---d~~~~--~~~----~~k~v~ 160 (374)
T PRK05839 100 PQFVLFDKQNPTIAYPNPFYQIYEGAA-IASRAKVLLMPLTKENDF---------TP---SLNEK--ELQ----EVDLVI 160 (374)
T ss_pred HHHHhcCCCCCEEEECCCCchhhHHHH-HhcCCEEEEeecccccCC---------cC---Ccchh--hhc----cccEEE
Confidence 773211134577888888887754443 344443333222111111 00 22221 222 466777
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc-cccc---C--CCCcee---ehhhhcC-CCc
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYF---G--VTPDLT---TLGKIIG-GGL 320 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~~---g--~~pdi~---t~sK~l~-~G~ 320 (474)
+..++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+.... .... + ..++++ +|||.++ +|+
T Consensus 161 i~nP~NPTG~~~s~~~-l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl 239 (374)
T PRK05839 161 LNSPNNPTGRTLSLEE-LIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGL 239 (374)
T ss_pred EeCCCCCcCcccCHHH-HHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccc
Confidence 7666788998887666 999999999999999999999877 3222111 1100 0 112333 7999987 899
Q ss_pred ceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeee
Q 011959 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (474)
Q Consensus 321 ~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (474)
|+||+++++++++.+.. ......++.+.+.+.++.+++. ++++.+++++..+..++.+.+.+ +.. .+..
T Consensus 240 RiG~ii~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l---~~~--~p~g 308 (374)
T PRK05839 240 RSGFIAGDASILKKYKA---YRTYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLAREIL---GIT--IPPA 308 (374)
T ss_pred eeEEEecCHHHHHHHHH---HHhhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHhc---CCC--CCCe
Confidence 99999999999888763 2122234567777777776663 23444443333333333333322 221 4556
Q ss_pred ceeEEEEEecCCCcCcccccccchHHHHHHHHHHHH-CCeEecccC--------CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~--------~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
|.++|+.+.+ ..++.+.|++ +||.+.|+. .+++|+++..+++++++++++|.+++
T Consensus 309 g~fi~~~~~~----------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l 372 (374)
T PRK05839 309 TFYVWLPVDN----------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYL 372 (374)
T ss_pred eEEEEEeCCC----------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 7788877631 1467788875 899999852 24688988889999999999999887
Q ss_pred h
Q 011959 472 R 472 (474)
Q Consensus 472 ~ 472 (474)
+
T Consensus 373 ~ 373 (374)
T PRK05839 373 E 373 (374)
T ss_pred h
Confidence 5
No 148
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=219.28 Aligned_cols=338 Identities=14% Similarity=0.123 Sum_probs=216.5
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCCC---CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFGA---PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGV 171 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~a 171 (474)
..++||..+. +-...++.+.+++.+.+... ..|+. ...++.++++++.+.++ ..+++++++|+++|+..+
T Consensus 31 ~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 107 (393)
T PRK05764 31 RDVISLGAGE---PDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNA 107 (393)
T ss_pred CCEEEeCCCC---CCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHH
Confidence 3577888874 32335789999999888653 22322 34667777777766543 357899999999999999
Q ss_pred HHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE
Q 011959 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (474)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (474)
++. ....++.|++.+++|.++.. .....|..+..++.....++ .-|++.+++.++. ++++|+
T Consensus 108 ~~~--~~~~gd~vl~~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~l~~---~~~~v~ 169 (393)
T PRK05764 108 FMA--LLDPGDEVIIPAPYWVSYPE-MVKLAGGVPVFVPTGEENGF------------KLTVEQLEAAITP---KTKALI 169 (393)
T ss_pred HHH--hcCCCCEEEecCCCCcchHH-HHHHcCCEEEEEecCcccCC------------cCCHHHHHHhhCc---cceEEE
Confidence 884 23456788888888876433 33333443322111100010 0168899888853 456666
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC-ccc-cc-cCCCCc---eeehhhhcC-CCcceE
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ-EY-FGVTPD---LTTLGKIIG-GGLPVG 323 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~-~~-~g~~pd---i~t~sK~l~-~G~~iG 323 (474)
+..++|++|.+.+.++ +++|.++|++||+++|+||+|..+ ..+.. ... +. .+.... +.+|||.++ .|+|+|
T Consensus 170 ~~~p~NPtG~~~~~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG 248 (393)
T PRK05764 170 LNSPSNPTGAVYSPEE-LEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLG 248 (393)
T ss_pred EECCCCCCCcccCHHH-HHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeE
Confidence 6666777898877665 999999999999999999999877 43321 111 11 122222 236999999 899999
Q ss_pred EEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhc-CCeeEEeee
Q 011959 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYI 400 (474)
Q Consensus 324 ~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~v~~~ 400 (474)
|+++++++++.+.. .....+.+.+++++.++.+.|+...+ +.+.++++++.+.+++.|++ + ++....+..
T Consensus 249 ~i~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~g 321 (393)
T PRK05764 249 YAAGPKELIKAMSK---LQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNE----IPGLECPKPEG 321 (393)
T ss_pred EEecCHHHHHHHHH---HHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhh----CCCCcccCCCc
Confidence 99999999988863 22223456788888888888752111 23334444444555555543 3 322222333
Q ss_pred ceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
|.++++.+...... ......++.+.++ ++||.+.++. .+.+|+++.++++++++++++|.+++++
T Consensus 322 ~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 322 AFYVFPNVSKLLGK--------SITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERFLES 391 (393)
T ss_pred ceEEEEeccccccc--------ccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 45666666431100 0001246777765 5799998863 2467999989999999999999999875
No 149
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.94 E-value=1.5e-24 Score=218.71 Aligned_cols=341 Identities=13% Similarity=0.075 Sum_probs=215.2
Q ss_pred CCEEEeccCChhhc--cCCCCCHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHH
Q 011959 98 GNEYIDYVGSWGPA--IIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP--SIEMVRFVNSGTEAC 168 (474)
Q Consensus 98 G~~~iD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~--~~~~v~~~~sGseA~ 168 (474)
|+.+++|..|...+ .++ .++.+.+++.+.+.... .|+ +..++++++++++..... ..++|++++|+++|+
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 35678888773211 122 57889999988876532 232 223556667766654311 467899999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
..+++.. ...++.|++.+++|..+. ......|..+...+....... . -|++.+++.++. +++
T Consensus 109 ~~~~~~l--~~~gd~v~i~~P~y~~~~-~~~~~~g~~v~~~~~~~~~~~---------~---~d~~~l~~~~~~---~~~ 170 (401)
T TIGR01264 109 EMCIAAL--ANAGQNILVPRPGFPLYE-TLAESMGIEVKLYNLLPDKSW---------E---IDLKQLESLIDE---KTA 170 (401)
T ss_pred HHHHHHh--CCCCCEEEEeCCCChhHH-HHHHHcCCEEEEeecCCccCC---------C---CCHHHHHHHhcc---Cce
Confidence 9999842 235678898899887643 333444443322211100000 0 178899888764 356
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCc--e---eehhhhcC-CCcc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD--L---TTLGKIIG-GGLP 321 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pd--i---~t~sK~l~-~G~~ 321 (474)
+|++..++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+..+. ......++ + -+|||.++ +|+|
T Consensus 171 ~v~~~~p~NPtG~~~~~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~~GlR 248 (401)
T TIGR01264 171 ALIVNNPSNPCGSVFSRQH-LEEILAVAERQCLPIIADEIYGDMVFSGATFE-PLASLSSTVPILSCGGLAKRWLVPGWR 248 (401)
T ss_pred EEEEcCCCCCCCCCCCHHH-HHHHHHHHHHCCCEEEEEhhhhhhccCCcccc-cHHHcCCCCcEEEEccCcccCCCccce
Confidence 6677666778898877655 999999999999999999999988 5442211 11122222 3 27999977 7999
Q ss_pred eEEEEecH------HHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011959 322 VGAYGGRR------DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG 392 (474)
Q Consensus 322 iG~~~~~~------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (474)
+||+++++ ++++.+.. ... ..++.+++++.++.+.|+...+ +...+.++++.+.+.+.|+++ . +
T Consensus 249 iG~iv~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~--~ 321 (401)
T TIGR01264 249 LGWIIIHDRRGILRDIRDGLVK---LSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAV-P--G 321 (401)
T ss_pred EEEEEecCcchhHHHHHHHHHH---Hhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhC-C--C
Confidence 99998863 34444431 111 2356688899988888863111 223344444445555555442 0 2
Q ss_pred CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC----CcceEEecCCcHHHHHHHHHHH
Q 011959 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAA 467 (474)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l 467 (474)
+....+..|+++++.+..... ++.....++.+.|+ ++||++.|+. .+++|+++..+++++++++++|
T Consensus 322 ~~~~~p~~g~f~~~~~~~~~~--------~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl 393 (401)
T TIGR01264 322 LRPVMPSGAMYMMVGIEMEHF--------PEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRI 393 (401)
T ss_pred CcccCCCeeeEEEEEeccccc--------CCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHH
Confidence 222345678888888743100 00011246777776 7899998863 2467888888899999999999
Q ss_pred HHHHhhC
Q 011959 468 EKVLRQI 474 (474)
Q Consensus 468 ~~~~~~~ 474 (474)
.++++++
T Consensus 394 ~~~~~~~ 400 (401)
T TIGR01264 394 QEFCERH 400 (401)
T ss_pred HHHHhcc
Confidence 9998764
No 150
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=1.7e-24 Score=217.64 Aligned_cols=330 Identities=13% Similarity=0.036 Sum_probs=214.9
Q ss_pred cCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC-----CC-CeEEEeCCHHH
Q 011959 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP-----SI-EMVRFVNSGTE 166 (474)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~la~~l~~~~~-----~~-~~v~~~~sGse 166 (474)
..|+.++||..|. ..++ .++.+++++.+.+.....|+ +..+++.++++++.+.++ +. ++|++|+|+++
T Consensus 25 ~~~~~~i~l~~~~--p~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~ 101 (393)
T TIGR03538 25 PASKPPIALSIGE--PKHP-TPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE 101 (393)
T ss_pred hcCCCeEEecCCC--CCCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH
Confidence 4577788888874 2333 57889999998776433343 235678888888877643 34 47999999999
Q ss_pred HHHHHHHHhHhhcCCc--EEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC
Q 011959 167 ACMGVLRLARAFTGRE--RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (474)
Q Consensus 167 A~~~al~~ar~~~~~~--~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (474)
++..+++.. ...++ .|++.+++|.++.. .....|..+..++.....++. -|++++++.+.+
T Consensus 102 al~~~~~~l--~~~gd~~~vlv~~P~y~~~~~-~~~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~~-- 164 (393)
T TIGR03538 102 ALFAFAQAV--INPGQAPLVVMPNPFYQIYEG-AALLAGAEPYFLNCTAENGFL------------PDFDAVPESVWR-- 164 (393)
T ss_pred HHHHHHHHH--cCCCCcceEEecCCCCcchHH-HHHhcCCeEEEeeccccCCCC------------CCHHHHHHHHhh--
Confidence 999999842 22333 37777888877543 333444433322211111110 178888887753
Q ss_pred CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC--Ccc----ccccCC--CCcee---eh
Q 011959 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGA----QEYFGV--TPDLT---TL 312 (474)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~--~~~----~~~~g~--~pdi~---t~ 312 (474)
++++|+++.++|++|.+.+.++ +++|.++|++|+++||+||+|..+ ..+. ... ....+. .+.++ +|
T Consensus 165 -~~k~i~l~~p~NPtG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 242 (393)
T TIGR03538 165 -RCQLLFVCSPGNPTGAVLSLDT-LKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSL 242 (393)
T ss_pred -cceEEEEeCCCCCcCcccCHHH-HHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecc
Confidence 4677777666788998887665 999999999999999999999877 4321 111 111111 12333 79
Q ss_pred hhhcC-CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhh
Q 011959 313 GKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKK 390 (474)
Q Consensus 313 sK~l~-~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~ 390 (474)
||.++ +|+|+||+++++++++.+.. .....+++.+++.+.++.+++..-+. ....+.++++.+.+.+.|++.
T Consensus 243 SK~~~~~GlRvG~~i~~~~l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--- 316 (393)
T TIGR03538 243 SKRSNLPGLRSGFVAGDAEILKAFLR---YRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--- 316 (393)
T ss_pred hhhcCCcccceEEEecCHHHHHHHHH---HHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 99987 79999999999999888763 22223456788888888777642100 223334444455555555442
Q ss_pred cCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------------CcceEEecCCcH
Q 011959 391 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------------FEAGFTSLAHSS 457 (474)
Q Consensus 391 ~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------------~~~~~~~~~~t~ 457 (474)
+....+..|.++|+.+.. + ..++.+.|+ ++||.+.|+. .+++|+++..++
T Consensus 317 --~~~~~p~gg~f~~~~~~~------------~---~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~ 379 (393)
T TIGR03538 317 --LDLELPDAGFYLWPKVPG------------D---DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPL 379 (393)
T ss_pred --CcccCCCeeEEEEEECCC------------C---HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCH
Confidence 122235567788887631 0 146777776 5799997763 235788888899
Q ss_pred HHHHHHHHHHHHH
Q 011959 458 DDIQHTITAAEKV 470 (474)
Q Consensus 458 e~i~~~l~~l~~~ 470 (474)
+++++++++|.++
T Consensus 380 ~~l~~~l~~l~~~ 392 (393)
T TIGR03538 380 EECVEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 151
>PRK08363 alanine aminotransferase; Validated
Probab=99.94 E-value=1.4e-24 Score=218.57 Aligned_cols=342 Identities=14% Similarity=0.050 Sum_probs=212.9
Q ss_pred CCEEEeccCChhhc-cCCCCCHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHH
Q 011959 98 GNEYIDYVGSWGPA-IIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 169 (474)
Q Consensus 98 G~~~iD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~-~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~ 169 (474)
|..+||+..|.... .++ .++.+.+++.+.+.... .|+ +..++++.+++++...++ +.++|++++|+++|+.
T Consensus 29 ~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 107 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQ 107 (398)
T ss_pred CCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 66889998884321 233 58899999998876532 232 234566777777665543 4679999999999999
Q ss_pred HHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEE
Q 011959 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (474)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (474)
.+++. ....++.|++.+++|.++...+ ...|............++ . -|++.+++.+.. ++++
T Consensus 108 ~~~~~--~~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~v~~~~~~~~~~---------~---~d~~~l~~~~~~---~~~~ 169 (398)
T PRK08363 108 LIFGA--LLDPGDEILIPGPSYPPYTGLV-KFYGGVPVEYRTIEEEGW---------Q---PDIDDIRKKITE---KTKA 169 (398)
T ss_pred HHHHH--hCCCCCEEEEcCCCCcchHHHH-HHcCCEEEEeccccccCC---------c---CCHHHHHhhCCc---ceEE
Confidence 99984 2445678888888887764433 333322111100000111 0 178888887753 4566
Q ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEE
Q 011959 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGA 324 (474)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~ 324 (474)
|++..++|++|.+.+.++ +++|.++|++||++||+||+|..+ ..+.......+.-..+++ +|||.++ +|+|+||
T Consensus 170 v~l~~p~NPtG~~~~~~~-~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ 248 (398)
T PRK08363 170 IAVINPNNPTGALYEKKT-LKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGY 248 (398)
T ss_pred EEEECCCCCCCcCcCHHH-HHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEE
Confidence 666666778898887666 999999999999999999999877 433221111111122333 7999976 8999999
Q ss_pred EEe--cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeee
Q 011959 325 YGG--RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (474)
Q Consensus 325 ~~~--~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (474)
+++ ++++++.+..........+++.+.+++.++.++|+...+ .+..++++++.+.+.+.|++ ++.....++.
T Consensus 249 ~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~ 324 (398)
T PRK08363 249 IYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNE----IPGISTTKPQ 324 (398)
T ss_pred EEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhc----CCCCEecCCC
Confidence 986 666665554210011112456788888888888853111 23334444555555555443 3222223344
Q ss_pred cee-EEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 401 SGM-FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 401 g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
|.+ +++.+..... .+ ....+.+.|.++||.+.|+. ..++|+++..+++++++++++|.+++++
T Consensus 325 g~~~~~~~l~~~~~--------~~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 325 GAFYIFPRIEEGPW--------KD--DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred eEEEEEEEeccCCC--------CC--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 444 4445532100 00 11233455678999998863 2357888888999999999999998764
No 152
>PLN02656 tyrosine transaminase
Probab=99.94 E-value=4.6e-24 Score=215.32 Aligned_cols=340 Identities=15% Similarity=0.084 Sum_probs=216.0
Q ss_pred CCCEEEeccCChhhccC----CCCCHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCH
Q 011959 97 DGNEYIDYVGSWGPAII----GHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSG 164 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~l----G~~~p~v~~a~~~~~~~~--~~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sG 164 (474)
.|+.+|+|..| ++. -..++.+++++.+.+... ..|+ +..++++++++++...++ ..++|++++|+
T Consensus 29 ~~~~~i~l~~G---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~ 105 (409)
T PLN02656 29 NGKRVISLGMG---DPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGC 105 (409)
T ss_pred cCCeeeecCCC---CCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCCh
Confidence 57788999888 443 346899999999988763 2332 234677778888776543 46799999999
Q ss_pred HHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC
Q 011959 165 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (474)
Q Consensus 165 seA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (474)
++|+..++... ...++.|++.+++|..+ .......|..+..++.....+. . -|++++++.++.
T Consensus 106 ~~al~~~~~~l--~~~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~i~~~~~~~~---------~---~d~~~l~~~~~~-- 168 (409)
T PLN02656 106 TQAIDVALSML--ARPGANILLPRPGFPIY-ELCAAFRHLEVRYVDLLPEKGW---------E---VDLDAVEALADQ-- 168 (409)
T ss_pred HHHHHHHHHHH--hCCCCeEEEeCCCCCcH-HHHHHHcCCEEEEEeCCCcCCC---------C---CCHHHHHHHhcc--
Confidence 99999999842 34567888888888654 3333334443322221101111 0 178899888763
Q ss_pred CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCce---eehhhhcC-C
Q 011959 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDL---TTLGKIIG-G 318 (474)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pdi---~t~sK~l~-~ 318 (474)
+++++++..++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+..+ ....++-...+ -+|||.++ +
T Consensus 169 -~~~~v~l~~P~NPtG~~~s~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~p 246 (409)
T PLN02656 169 -NTVALVIINPGNPCGNVYSYQH-LKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVP 246 (409)
T ss_pred -CceEEEEECCCCCCCCCCCHHH-HHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCc
Confidence 3444444444677888876555 999999999999999999999988 544321 11112211223 37999977 8
Q ss_pred CcceEEEEec--------HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHH
Q 011959 319 GLPVGAYGGR--------RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDA 387 (474)
Q Consensus 319 G~~iG~~~~~--------~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~ 387 (474)
|||+||++++ +++++.+.. ... ...+.+.+++.++.++|+...+ ....+.++++.+.+.+.|++
T Consensus 247 GlRiG~~i~~~~~~~~~~~~~~~~~~~---~~~-~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~- 321 (409)
T PLN02656 247 GWRLGWFVTTDPSGSFRDPKIVERIKK---YFD-ILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE- 321 (409)
T ss_pred ceeEEEEEEeCcccccccHHHHHHHHH---HHh-hhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 9999999983 577777752 111 1234678889998888863111 22333444444444444443
Q ss_pred hhhcCCee--EEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHH
Q 011959 388 GKKAGHAI--CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQ 461 (474)
Q Consensus 388 ~~~~~~~~--~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~ 461 (474)
++... ..+..|+++|+.+........ . .....+.+.|.++||.+.|+. .+++|+++..++++++
T Consensus 322 ---~~~~~~~~~p~gg~~~w~~l~~~~~~~~-----~--~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~ 391 (409)
T PLN02656 322 ---IPCITCPHKPEGSMAVMVKLNLSLLEDI-----S--DDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLE 391 (409)
T ss_pred ---CCCCcCCcCCCeEEEEEEecchhhcCCC-----C--CHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHH
Confidence 33211 123456777777642100000 0 011234567778999999873 2468898888999999
Q ss_pred HHHHHHHHHHhh
Q 011959 462 HTITAAEKVLRQ 473 (474)
Q Consensus 462 ~~l~~l~~~~~~ 473 (474)
+++++|++++..
T Consensus 392 eal~rl~~~~~~ 403 (409)
T PLN02656 392 EALGRIKSFYLR 403 (409)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 153
>PRK08912 hypothetical protein; Provisional
Probab=99.94 E-value=2.7e-24 Score=215.80 Aligned_cols=333 Identities=17% Similarity=0.172 Sum_probs=216.7
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCCC---CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFGA---PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGV 171 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~---~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~~~a 171 (474)
..+||..|... ++ .++.+.+++.+.+... ..|+. ..++++.+++++.+.++ .++ +|++|+|+++|+..+
T Consensus 27 ~~i~l~~g~p~--~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 103 (387)
T PRK08912 27 GAINLGQGFPD--DP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAA 103 (387)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHH
Confidence 56888888532 23 4788888888877543 22322 34677888888876543 456 899999999999988
Q ss_pred HHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCC-CCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEE
Q 011959 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (474)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (474)
+.. ...+++.|++.+++|..+.. .+...|..+..++... ..++ |++++++.+.. +++++
T Consensus 104 ~~~--~~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~~--------------~~~~l~~~~~~---~~~~v 163 (387)
T PRK08912 104 LLA--LVEPGDEVVLFQPLYDAYLP-LIRRAGGVPRLVRLEPPHWRL--------------PRAALAAAFSP---RTKAV 163 (387)
T ss_pred HHH--hcCCCCEEEEeCCCchhhHH-HHHHcCCEEEEEecCcccCcC--------------CHHHHHHHhCc---cceEE
Confidence 884 23456788888888876543 3344444332221110 0011 78899888753 45666
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc--cccccCCCCc-e--eehhhhcC-CCcceE
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG--AQEYFGVTPD-L--TTLGKIIG-GGLPVG 323 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~--~~~~~g~~pd-i--~t~sK~l~-~G~~iG 323 (474)
++..++|++|.+.+.++ +++|.++|++|+++||+||+|..| ..+..+ ..+..+.... + .+|||.++ +|+|+|
T Consensus 164 ~l~~p~NPtG~~~s~~~-~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 242 (387)
T PRK08912 164 LLNNPLNPAGKVFPREE-LALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVG 242 (387)
T ss_pred EEeCCCCCcCcccCHHH-HHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeE
Confidence 66666788998887666 999999999999999999999877 433211 1122222222 2 37999999 899999
Q ss_pred EEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeec
Q 011959 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (474)
Q Consensus 324 ~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (474)
|+++++++++.+.. .....+++.++..+.++.++|....+ +++.++++++.+.+.+.|++ +++....+..|
T Consensus 243 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~g~ 315 (387)
T PRK08912 243 FVCAAPPLLRVLAK---AHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRR----IGFPVLPSQGT 315 (387)
T ss_pred EEecCHHHHHHHHH---HHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCcc
Confidence 99999999988763 22223456677777777777642111 23445555555555555554 34322222345
Q ss_pred eeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC--------CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~--------~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.++++.+..... .....++++.|+ ++||++.|+. .+++|+++..+++++++++++|.++++
T Consensus 316 ~~l~~~l~~~~~----------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 316 YFLTVDLAPLGL----------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARR 385 (387)
T ss_pred eEEEecccccCC----------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 566766643100 011256777776 5799998852 246789888899999999999999876
Q ss_pred h
Q 011959 473 Q 473 (474)
Q Consensus 473 ~ 473 (474)
+
T Consensus 386 ~ 386 (387)
T PRK08912 386 R 386 (387)
T ss_pred c
Confidence 4
No 154
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=3.3e-24 Score=216.23 Aligned_cols=341 Identities=13% Similarity=0.093 Sum_probs=214.7
Q ss_pred EcCCCEEEeccCChhhccC--C--CCCHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeC
Q 011959 95 DIDGNEYIDYVGSWGPAII--G--HADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIEMVRFVN 162 (474)
Q Consensus 95 d~dG~~~iD~~~~~~~~~l--G--~~~p~v~~a~~~~~~~~--~~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~ 162 (474)
..+|+.+|+|..| ++. + -.+|.+.+++.+.+.+. ..|+ +..++++.+++++.+.++ ..++|++|+
T Consensus 28 ~~~~~~~i~l~~G---~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~ 104 (409)
T PLN00143 28 EDDHRLAISFGFG---DPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTL 104 (409)
T ss_pred cCCCCceeeCCCC---CCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEec
Confidence 3457788898888 443 2 26888999999988753 2232 345678888888876643 568999999
Q ss_pred CHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc
Q 011959 163 SGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (474)
Q Consensus 163 sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (474)
|+++++..+++. ....++.|++.+++|+++.. .....|..+...+.....++ . -|+++|+++++.
T Consensus 105 G~~~al~~~~~~--l~~~gd~v~v~~P~y~~~~~-~~~~~g~~~~~~~~~~~~~~---------~---~d~~~l~~~~~~ 169 (409)
T PLN00143 105 GCKHAAEIIIKV--LARPEANILLPRPGFPDVET-YAIFHHLEIRHFDLLPEKGW---------E---VDLDAVEAIADE 169 (409)
T ss_pred ChHHHHHHHHHH--HcCCCCEEEEcCCCCcCHHH-HHHHcCCEEEEEeccCCCCC---------c---CCHHHHHHhccc
Confidence 999999999984 23456789999999987543 33333433222111000111 0 178999888753
Q ss_pred CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCcee---ehhhhcC
Q 011959 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLT---TLGKIIG 317 (474)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pdi~---t~sK~l~ 317 (474)
+ ..+.++++| +|++|.+.+.++ +++|.++|++|+++||+||+|.+| ..+..+ ....+.-.+.++ +|||.++
T Consensus 170 ~--~~~~~~~nP-~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~ 245 (409)
T PLN00143 170 N--TIAMVIINP-GNPCGSVYSYEH-LNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWM 245 (409)
T ss_pred C--CEEEEEECC-CCCCCCccCHHH-HHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcC
Confidence 2 344555555 678898887666 999999999999999999999988 544221 112222122233 7999977
Q ss_pred -CCcceEEEEe--cHHHH------HhhcCCCCcccccCCCCChHHHHHHHHHHHHh-cC--CCHHHHHHHHHHHHHHHHH
Q 011959 318 -GGLPVGAYGG--RRDIM------EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-KE--PGTYEYLNKITGELTQGII 385 (474)
Q Consensus 318 -~G~~iG~~~~--~~~i~------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~-~~--~~~~~~~~~~~~~l~~~L~ 385 (474)
+|+|+||+++ ++.++ +.+. .......+ .+.+++.++.++|+.. .. ++..++++++.+.+.+.|.
T Consensus 246 ~pGlRvG~~v~~~p~~~~~~~~~~~~~~---~~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~ 321 (409)
T PLN00143 246 IPGWGLGWLVTCDPSGLLQICEIADSIK---KALNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLK 321 (409)
T ss_pred CCccceEEEEeeCchhhhhhHHHHHHHH---HHHhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7999999988 33332 2222 11111222 4678888888777521 00 2334444444444444444
Q ss_pred HHhhhcCCee--EEeeeceeEEEEEecCCCcCcccccccchHHHHHHH-HHHHHCCeEecccC----CcceEEecCCcHH
Q 011959 386 DAGKKAGHAI--CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY-RGMLEEGVYFAPSQ----FEAGFTSLAHSSD 458 (474)
Q Consensus 386 ~~~~~~~~~~--~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~~----~~~~~~~~~~t~e 458 (474)
+ .+... ..+..|+++|+.+...... +.....++. +.+.++||.+.|+. .+++|+++..+++
T Consensus 322 ~----~~~~~~~~~p~gg~f~w~~l~~~~~~--------~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~ 389 (409)
T PLN00143 322 E----IPCIMCPQKAEGAFFALVKLNLLLLE--------DIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQS 389 (409)
T ss_pred c----CCCCCCCCCCCeeEEEEEecchhhcC--------CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHH
Confidence 3 33221 2234677888877421000 000113444 45578899999874 3468999888999
Q ss_pred HHHHHHHHHHHHHhh
Q 011959 459 DIQHTITAAEKVLRQ 473 (474)
Q Consensus 459 ~i~~~l~~l~~~~~~ 473 (474)
++++++++|.+++++
T Consensus 390 ~l~~al~rl~~~l~~ 404 (409)
T PLN00143 390 SLEDGLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998864
No 155
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=3e-24 Score=217.42 Aligned_cols=340 Identities=14% Similarity=0.082 Sum_probs=211.0
Q ss_pred CCEEEeccCChhhccCC--CCCHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHH
Q 011959 98 GNEYIDYVGSWGPAIIG--HADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEA 167 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA 167 (474)
|+.+|++..|-. ..++ -.++++.+++.+.+..+. .|+ +..+++..+++++.+.++ ..++|++|+|+++|
T Consensus 51 ~~~~i~l~~G~P-~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~a 129 (430)
T PLN00145 51 PRPVLPLGHGDP-SAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQA 129 (430)
T ss_pred CCCeeeCCCCCC-CCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHH
Confidence 677888887722 1122 247899999999887642 232 234667777777766543 46899999999999
Q ss_pred HHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCe
Q 011959 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (474)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (474)
+..+++.. ..+++.|++.+++|..+.. .....|..+..+++....++ . -|+++++++++. ++
T Consensus 130 l~l~~~~l--~~~Gd~Vlv~~P~y~~y~~-~~~~~g~~~~~~~~~~~~~~---------~---~d~~~l~~~~~~---~~ 191 (430)
T PLN00145 130 IEIIMSVL--AQPGANILLPRPGYPLYEA-RAVFSGLEVRHFDLLPERGW---------E---VDLEGVEALADE---NT 191 (430)
T ss_pred HHHHHHHh--cCCCCEEEEcCCCCccHHH-HHHHcCCEEEEeeCCcccCC---------c---CCHHHHHHHhCc---Cc
Confidence 99999842 2456789999999887543 33333443322221111110 0 188999988864 34
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCcee---ehhhhcC-CCcc
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLT---TLGKIIG-GGLP 321 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pdi~---t~sK~l~-~G~~ 321 (474)
+++++..++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+..+ ....++-...++ +|||.++ +|||
T Consensus 192 ~~i~i~~P~NPtG~v~~~~~-l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~R 270 (430)
T PLN00145 192 VAMVIINPNNPCGSVYSYEH-LAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWR 270 (430)
T ss_pred eEEEEeCCCCCCCCCCCHHH-HHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCee
Confidence 44554444678898887666 999999999999999999999887 443221 111122122233 7999977 8999
Q ss_pred eEEEEe--cHHHHH------hhcCCCCcccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhh
Q 011959 322 VGAYGG--RRDIME------MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKK 390 (474)
Q Consensus 322 iG~~~~--~~~i~~------~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 390 (474)
+||+++ ++.+++ .+. .. .....+.+.+.+.++..+|+.-.+ ++.++.++++.+.+.+.|++
T Consensus 271 lG~iv~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~---- 342 (430)
T PLN00145 271 LGWIATCDPNGILKETKVVDSIR---NY-LNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKE---- 342 (430)
T ss_pred EEEEEEecchhhhhhhHHHHHHH---HH-hcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 999986 444433 222 11 112224567888888887763111 22333444444444444433
Q ss_pred cCCee-E-EeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC----CcceEEecCCcHHHHHHH
Q 011959 391 AGHAI-C-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHT 463 (474)
Q Consensus 391 ~~~~~-~-v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~ 463 (474)
++... . .+..|+++++.+....... .....+++..++ ++||++.|+. .+++|+++..++++++++
T Consensus 343 ~~g~~~~~~P~ga~y~~v~l~~~~~~~--------~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~a 414 (430)
T PLN00145 343 IKCITCPHKPEGSMFVMVKLDLSCLSG--------IKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDG 414 (430)
T ss_pred CCCCCCCcCCCeeeEEEeccChhhcCC--------CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHH
Confidence 32222 2 2455666777663210000 001245665554 6799999863 346789888899999999
Q ss_pred HHHHHHHHhh
Q 011959 464 ITAAEKVLRQ 473 (474)
Q Consensus 464 l~~l~~~~~~ 473 (474)
+++|.+++.+
T Consensus 415 l~rl~~~~~~ 424 (430)
T PLN00145 415 LERLKSFCLR 424 (430)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 156
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.2e-24 Score=217.03 Aligned_cols=328 Identities=13% Similarity=0.127 Sum_probs=211.9
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhc---CCCC--CCCHHHHHHHHHHHhhC-----CCCCeEEEeCCHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG---TSFG--APCLLENVLAEMVISAV-----PSIEMVRFVNSGTEAC 168 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~--~~~~~~~~la~~l~~~~-----~~~~~v~~~~sGseA~ 168 (474)
..++|+..|. ++++ .+|.+++++.+.+..+ ..|. +..+++.++++++.+.+ -..++|++|+|+++++
T Consensus 28 ~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al 104 (374)
T PRK02610 28 IQLDRLDTNE--FPYD-LPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELI 104 (374)
T ss_pred cceeEecCCC--CCCC-CCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHH
Confidence 4588888874 3333 6789999999877653 1221 12345566666665442 1467899999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCC-CCCCCCCCCCceEEccCCCHHHHHHHHhcC-CCC
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENN-KGE 246 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~ 246 (474)
..++... ...+.+.|++.+++|.++. ......|..+..++... ..++ |+++|++.+++. ..+
T Consensus 105 ~~~~~~~-~~~g~~~Vlv~~P~y~~~~-~~~~~~g~~~~~~~~~~~~~~~--------------d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 105 RSLLIAT-CLGGEGSILVAEPTFSMYG-ILAQTLGIPVVRVGRDPETFEI--------------DLAAAQSAIEQTQNPP 168 (374)
T ss_pred HHHHHHH-cCCCCCeEEEcCCChHHHH-HHHHHcCCEEEEecCCcccCCC--------------CHHHHHHHHHhhcCCC
Confidence 8777631 2233347999999997754 33344454433222110 0111 789999888641 125
Q ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCce---eehhhhcC-CCcc
Q 011959 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL---TTLGKIIG-GGLP 321 (474)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi---~t~sK~l~-~G~~ 321 (474)
+++|++.+++|++|.+.+.++ +++|.++| ++++||+||+|..| ..... ....-.+++ -+|||.+| +|+|
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~~-l~~l~~~~--~~~~iI~De~Y~~~~~~~~~---~~~~~~~~~ivi~SfSK~~g~~GlR 242 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAAE-LEWLRSLP--EDILVVIDEAYFEFSQTTLV---GELAQHPNWVILRTFSKAFRLAAHR 242 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHHH-HHHHHhcc--CCcEEEEeccccccCccchH---HHHhcCCCEEEEEecchhccCcccc
Confidence 777777677888999988766 88888877 49999999999877 32111 111112333 37999997 8999
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeec
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (474)
+||+++++++++.+.... ..++.+.+++.++.++|+.. +.+.+++++..+. ++.+.+.+..++.....+..|
T Consensus 243 iG~~v~~~~l~~~l~~~~-----~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~~g 314 (374)
T PRK02610 243 VGYAIGHPELIAVLEKVR-----LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQE-RDRLYQALQELPQLRVWPSAA 314 (374)
T ss_pred eeeeecCHHHHHHHHHhc-----CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHH-HHHHHHHHHhCCCcEeCCCcc
Confidence 999999999998887421 23566888888888777532 2333333333322 333333333332222235667
Q ss_pred eeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
.++++.+... .....+++.|.++||.+.+. .+++|+++.. .+++++++++|+++++.+
T Consensus 315 ~f~~~~l~~~-------------~~~~~~~~~l~~~gi~v~~~-~~~lRls~~~-~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 315 NFLYLRLSQD-------------AALAALHQALKAQGTLVRHT-GGGLRITIGT-PEENQRTLERLQAALTQL 372 (374)
T ss_pred eEEEEeCCCC-------------CCHHHHHHHHHHCCEEEEeC-CCeEEEeCCC-HHHHHHHHHHHHHHHhhc
Confidence 7888776421 11256788889999999864 3568898775 567899999999988754
No 157
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.94 E-value=4.2e-24 Score=215.92 Aligned_cols=351 Identities=12% Similarity=0.029 Sum_probs=221.9
Q ss_pred CEEEEcCCCEEEeccCChhhcc-CCCCCHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHhhC--------C-CC
Q 011959 91 SHMWDIDGNEYIDYVGSWGPAI-IGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAV--------P-SI 155 (474)
Q Consensus 91 ~~~~d~dG~~~iD~~~~~~~~~-lG~~~p~v~~a~~~~~~~~--~~~~---~~~~~~~~la~~l~~~~--------~-~~ 155 (474)
.++.+..|+.+|||..|..... .=..++.+.+++.+.+... ..|+ +..++++.+++++.+.+ . +.
T Consensus 25 ~~~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 25 NAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred hhccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 3455568888999998843211 0125788999998887652 2333 23567778888877542 1 46
Q ss_pred CeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHH
Q 011959 156 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSA 235 (474)
Q Consensus 156 ~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 235 (474)
+++++|+|+++++..+++. ....++.|++.+++|..+.. .....|..+..++...... + --|+++
T Consensus 105 ~~i~it~G~~~al~~~~~~--~~~~gd~vlv~~P~y~~~~~-~~~~~g~~~~~i~~~~~~~---------~---~~d~~~ 169 (412)
T PTZ00433 105 DNVVLCSGVSHAILMALTA--LCDEGDNILVPAPGFPHYET-VCKAYGIEMRFYNCRPEKD---------W---EADLDE 169 (412)
T ss_pred hhEEEeCChHHHHHHHHHH--hcCCCCEEEEccCCcccHHH-HHHHcCCEEEEEecCcccc---------C---cCCHHH
Confidence 8999999999999999984 23456788888888877533 3333443322211110000 0 017888
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccC-CCCcee--
Q 011959 236 LENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFG-VTPDLT-- 310 (474)
Q Consensus 236 le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g-~~pdi~-- 310 (474)
|++.++. ++++|++..++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+..+ ....+. -.+-++
T Consensus 170 l~~~~~~---~~~~i~~~~p~NPtG~~~s~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 245 (412)
T PTZ00433 170 IRRLVDD---RTKALIMTNPSNPCGSNFSRKH-VEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILG 245 (412)
T ss_pred HHHHhcc---CceEEEEeCCCCCCCcccCHHH-HHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEc
Confidence 9887763 4566667666788998887666 999999999999999999999988 443221 111111 111222
Q ss_pred ehhhhcC-CCcceEEEEe------cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011959 311 TLGKIIG-GGLPVGAYGG------RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 383 (474)
Q Consensus 311 t~sK~l~-~G~~iG~~~~------~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~ 383 (474)
+|||.++ +|+|+||+++ .+++++.+.. . ...+++.+++.+.++.++|+.- .+.+.+++++..+.-++.
T Consensus 246 SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~---~-~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~ 320 (412)
T PTZ00433 246 GTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKR---L-GMLVCGPCSVVQAALGEALLNT-PQEHLEQIVAKLEEGAMV 320 (412)
T ss_pred cchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHH---H-hhccCCCChHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHH
Confidence 7999996 8999999986 2457666652 1 1123567889998888887631 123333333333333333
Q ss_pred HHHHhhhc-CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC----CcceEEecCCcH
Q 011959 384 IIDAGKKA-GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSS 457 (474)
Q Consensus 384 L~~~~~~~-~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~~t~ 457 (474)
+.+.+.++ ++....+..|+++++.+......+ .....++++.|+ ++||.+.++. .+++|+++...+
T Consensus 321 l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~--------~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~ 392 (412)
T PTZ00433 321 LYNHIGECIGLSPTMPRGSMFLMSRLDLEKFRD--------IKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPV 392 (412)
T ss_pred HHHHHhcCCCCcccCCCeeEEEEEEechhhcCC--------CCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCH
Confidence 33333332 222223445777887774211000 001256788887 5799999874 246788888889
Q ss_pred HHHHHHHHHHHHHHhh
Q 011959 458 DDIQHTITAAEKVLRQ 473 (474)
Q Consensus 458 e~i~~~l~~l~~~~~~ 473 (474)
+++++++++|.++++.
T Consensus 393 e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 393 EVLREAVERIKAFCER 408 (412)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 158
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=1.4e-24 Score=215.23 Aligned_cols=324 Identities=15% Similarity=0.163 Sum_probs=208.9
Q ss_pred cCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHH
Q 011959 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRL 174 (474)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ 174 (474)
.++++++||..|. +++| .++.+++++.+.+.....| +.....+|.+.++++++ +.++|++++|+++++..+++.
T Consensus 17 ~~~~~~i~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~y--~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~ 91 (356)
T PRK08056 17 ISPDQLLDFSANI--NPLG-MPVSLKRAIIDNLDCAERY--PDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSG 91 (356)
T ss_pred CChhhEEEecccc--CCCC-CCHHHHHHHHHHHHhcccC--cCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHH
Confidence 4567789998764 5666 6788999998877654333 33345778788888776 678999999999999998884
Q ss_pred hHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcc
Q 011959 175 ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 254 (474)
Q Consensus 175 ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep 254 (474)
+.+ +++++.+++|..+.. .....|..+..++.....++ . .| +++++.+. +++++|++..
T Consensus 92 ---l~~-g~viv~~P~y~~~~~-~~~~~g~~~~~v~~~~~~~~-----------~-~~-~~~~~~~~---~~~k~v~l~~ 150 (356)
T PRK08056 92 ---LKP-RRAMIVTPGFAEYRR-ALQQVGCEIRRYSLREADGW-----------Q-LT-DAILEALT---PDLDCLFLCT 150 (356)
T ss_pred ---hCC-CCEEEeCCCcHHHHH-HHHHcCCeEEEEecccccCC-----------C-cc-HHHHHhcc---CCCCEEEEeC
Confidence 334 357888888866432 33444443332211111111 0 02 23444443 3566777766
Q ss_pred ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCc---eeehhhhcC-CCcceEEEEe-c
Q 011959 255 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD---LTTLGKIIG-GGLPVGAYGG-R 328 (474)
Q Consensus 255 ~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pd---i~t~sK~l~-~G~~iG~~~~-~ 328 (474)
++|++|.+.+. +.+++|.++|++||++||+||+|.+| ..+.... ..+...+. +.+|||.++ +|+|+||+++ +
T Consensus 151 p~NPTG~~~~~-~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~ 228 (356)
T PRK08056 151 PNNPTGLLPER-QLLQAIAERCKSLNIALILDEAFIDFIPDETGFI-PQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD 228 (356)
T ss_pred CcCCCCCCCCH-HHHHHHHHHHHhcCCEEEEecchhccCCcchHHH-HHhccCCCEEEEEechhhccCcchhheeeecCC
Confidence 77888987654 44999999999999999999999888 4332111 11111123 237999999 8999999987 4
Q ss_pred HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEE
Q 011959 329 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (474)
Q Consensus 329 ~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (474)
+++++.+... ...++.+.+++.++.++++.-.. ....+.++++.+++.+.|++ .+.....+..|.++++.
T Consensus 229 ~~~~~~l~~~-----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~~~~~~~~ 299 (356)
T PRK08056 229 DAAVARMRRQ-----QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCA----LPLLTVWPGRANYLFLR 299 (356)
T ss_pred HHHHHHHHHh-----CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEEcCCCCcEEEEE
Confidence 6777777531 23456677777777777641000 22334455555555555543 32122234567777776
Q ss_pred EecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC------cceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
+..+ ..++++.|+++||.+.++.. +++|+++. ++++.+.+++.|+++++
T Consensus 300 ~~~~---------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 300 CERP---------------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR-SAAENERLLAALRNVLT 354 (356)
T ss_pred cCCC---------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc-CHHHHHHHHHHHHHHHc
Confidence 5321 14688899999999987631 35677754 67999999999998764
No 159
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.8e-24 Score=215.66 Aligned_cols=344 Identities=11% Similarity=0.074 Sum_probs=218.1
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMG 170 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~ 170 (474)
|.+++|+..|.. .++ .+|.+.+++.+.+.+.. .|+ +..++++++++++.+.++ ..++|++++|+++|+..
T Consensus 32 ~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 32 GRSIVDLTVGEP--DFD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred cCCEEEcCCCCC--CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 345677777742 222 47889999999887532 232 234788899998887764 46789999999999999
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (474)
+++. ....++.|++.+++|.++.... ...+.....+..+...++ . -|++++++.+.. ++++|
T Consensus 109 ~~~~--~~~~gd~vl~~~p~y~~y~~~~-~~~~~~~~~v~~~~~~~~-----------~-~~~~~l~~~~~~---~~~~v 170 (402)
T PRK06107 109 ALMA--TLEAGDEVIIPAPYWVSYPDMV-LANDGTPVIVACPEEQGF-----------K-LTPEALEAAITP---RTRWL 170 (402)
T ss_pred HHHH--hcCCCCEEEEecCCCcCHHHHH-HHcCCEEEEecCCcccCC-----------C-CCHHHHHhhcCc---CceEE
Confidence 9873 2345677888888777754333 333322211111111111 0 167888887753 45666
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCc-ccCCCcc-c-cc-cCCCCcee---ehhhhcC-CCcc
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGF-RLAYGGA-Q-EY-FGVTPDLT---TLGKIIG-GGLP 321 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~-r~g~~~~-~-~~-~g~~pdi~---t~sK~l~-~G~~ 321 (474)
++..++|++|.+.+.++ +++|.++|++| ++++|+||+|..+ ..+..+. . .. .+....++ +|||.++ +|+|
T Consensus 171 ~l~~p~NPtG~~~s~~~-~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 249 (402)
T PRK06107 171 ILNAPSNPTGAVYSRAE-LRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWR 249 (402)
T ss_pred EEECCCCCCCcCcCHHH-HHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccc
Confidence 66555778898887666 99999999998 9999999999877 4332111 1 11 11122333 6899998 8999
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
+||+++++++++.+.. .....+++.+.+++.++..+|+.-.. ....+.++++.+.+.+.|++. -++....+.
T Consensus 250 iG~~~~~~~~~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~g~~~~~p~ 323 (402)
T PRK06107 250 IGYAAGPADLIAAINK---LQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI---PGLSCLVPD 323 (402)
T ss_pred eeeeecCHHHHHHHHH---HHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC---CCCcccCCC
Confidence 9999999999988873 33334567788899998888852111 222334444455555555432 022222234
Q ss_pred eceeEEEEEecCCCcCcccccccch---HHHHHHHHHH-HHCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSET---TKFARFYRGM-LEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~l-~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
.|.++|+.+..-. ....+.. .....+.+.+ .++||.+.|+. .+++|+++..++|++++++++|.+.+
T Consensus 324 gg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l 398 (402)
T PRK06107 324 GAFYLYVNCAGLI-----GKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAV 398 (402)
T ss_pred cceEEeeeccccc-----ccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 4666676652100 0000100 0123455545 57899999873 24689998899999999999999998
Q ss_pred hhC
Q 011959 472 RQI 474 (474)
Q Consensus 472 ~~~ 474 (474)
+++
T Consensus 399 ~~~ 401 (402)
T PRK06107 399 AAL 401 (402)
T ss_pred Hhc
Confidence 764
No 160
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.94 E-value=1.8e-25 Score=211.31 Aligned_cols=330 Identities=19% Similarity=0.157 Sum_probs=221.0
Q ss_pred CCHHHHHHHHHHHHhc-C----CCCCCCHHHHHHHHHHHhhCC----CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEE
Q 011959 116 ADDQVLAALGETMKKG-T----SFGAPCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 186 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~-~----~~~~~~~~~~~la~~l~~~~~----~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~ 186 (474)
.+..|.+++++.+... . ...+..++...|++++.+.++ ..++|++|+|+.+|+..++.. .+..++.||+
T Consensus 45 ~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~--l~~~GDeVii 122 (420)
T KOG0257|consen 45 PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLG--LLNPGDEVIV 122 (420)
T ss_pred CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHH--HcCCCCEEEE
Confidence 4566888888887663 2 112467888899999998665 356899999999999988884 4567899999
Q ss_pred EeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEc-cCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCC
Q 011959 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTA-PFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 265 (474)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~ 265 (474)
++|.|..+.....-..|.++....-+ ..| ++..- -..|.+.||..+.+ ++++|+++.++|++|.+.+.
T Consensus 123 ~eP~fd~Y~~~~~maG~tpv~v~~~~-~~g-------~~~s~~~~~D~~~le~~~t~---kTk~Ii~ntPhNPtGkvfsR 191 (420)
T KOG0257|consen 123 FEPFFDCYIPQVVMAGGTPVFVPLKP-KEG-------NVSSSDWTLDPEELESKITE---KTKAIILNTPHNPTGKVFSR 191 (420)
T ss_pred ecCcchhhhhHHhhcCCcceeecccc-ccc-------cccCccccCChHHHHhhccC---CccEEEEeCCCCCcCcccCH
Confidence 99999998777766666544321111 011 00100 12389999999984 68899999999999999887
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCc-ccCC-C--ccccccCC---CCceeehhhhcC-CCcceEEEEecHHHHHhhcC
Q 011959 266 PDFLNAIRRITKENGALLIFDEVMTGF-RLAY-G--GAQEYFGV---TPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAP 337 (474)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~--~~~~~~g~---~pdi~t~sK~l~-~G~~iG~~~~~~~i~~~~~~ 337 (474)
++ |++|++||++||+++|+||||--+ ..+. + ++.. -|+ ...+.++||+++ .|||+||+++++.++....
T Consensus 192 ee-Le~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~asl-Pgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~- 268 (420)
T KOG0257|consen 192 EE-LERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASL-PGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALF- 268 (420)
T ss_pred HH-HHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecC-CchhheEEEeccccceeeeeeeeeeeeechHHhhhhHH-
Confidence 77 999999999999999999999766 5553 1 2211 222 333447999999 7999999999888888776
Q ss_pred CCCcccccCCCCChHHHHHHHHHHHHhc---C-------CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEE
Q 011959 338 AGPMYQAGTLSGNPLAMTAGIHTLKRLK---E-------PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (474)
Q Consensus 338 ~~~~~~~~t~~~~~~~~aaa~aal~~~~---~-------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (474)
.......+..+...+.|..+++..-. + .++...++++++.+.+.|.++ ++....+..+.+++.+
T Consensus 269 --~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l----g~~v~~p~gayyl~ad 342 (420)
T KOG0257|consen 269 --PVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL----GLKVTGPEGAYYLWAD 342 (420)
T ss_pred --HHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCceEEEEe
Confidence 33344455556566666666654322 1 125566777777777777765 4444455667778888
Q ss_pred EecC-CCcCcccccccchHHHHHHHHHHH-HCCeEecccCC-----------cceEEecCCcHHHHHHHHHHHHH
Q 011959 408 FTEG-PVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-----------EAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 408 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~-----------~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
|... +...+... .+....-.+.+.+. +.|+.+.|... ..+++.++.+++-++.++++|++
T Consensus 343 fs~~~~~~~~~~~--~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 343 FSLAKSWPFFEEI--LEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLKK 415 (420)
T ss_pred ccccccCCcchhh--ccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 8611 11000000 00001134566666 55887766531 12355678888999999998873
No 161
>PRK07777 aminotransferase; Validated
Probab=99.94 E-value=5e-24 Score=213.89 Aligned_cols=334 Identities=16% Similarity=0.148 Sum_probs=214.8
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGV 171 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~---~~~~~~~~la~~l~~~~~---~~~-~v~~~~sGseA~~~a 171 (474)
.++||..|.... ..++.+.+++.+.+.... .|. +..++++.+++++.+.++ ..+ +|++|+||++|+..+
T Consensus 25 ~~i~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 101 (387)
T PRK07777 25 GAVNLGQGFPDE---DGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA 101 (387)
T ss_pred CeEEccCCCCCC---CCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 468888875321 235778888887776532 232 234667777777766654 234 799999999999998
Q ss_pred HHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE
Q 011959 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (474)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (474)
+.. ...+++.|++..++|++.. ..+...|..+...+...... .+. -|++++++.+.. ++++|+
T Consensus 102 ~~~--~~~~gd~vli~~p~y~~~~-~~~~~~g~~~~~~~~~~~~~--------~~~---~d~~~l~~~~~~---~~~~v~ 164 (387)
T PRK07777 102 VLG--LVEPGDEVLLIEPYYDSYA-AVIAMAGAHRVPVPLVPDGR--------GFA---LDLDALRAAVTP---RTRALI 164 (387)
T ss_pred HHH--hcCCCCEEEEeCCCchhhH-HHHHHCCCEEEEeecCCccC--------CCc---CCHHHHHHhcCc---ccEEEE
Confidence 873 2345678888888887754 34444444322211110000 000 178899888763 467777
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC-cccccc-CCCCc---eeehhhhcC-CCcceEE
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-GVTPD---LTTLGKIIG-GGLPVGA 324 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~-g~~pd---i~t~sK~l~-~G~~iG~ 324 (474)
+++++|++|.+.+.++ +++|.++|++|+++||+||+|.++ ..+.. .....+ +...+ +.+|||.++ +|+|+||
T Consensus 165 l~~p~NPtG~~~~~~~-~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 243 (387)
T PRK07777 165 VNSPHNPTGTVLTAAE-LAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGW 243 (387)
T ss_pred EcCCCCCCCccCCHHH-HHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEE
Confidence 8777888998886554 999999999999999999999877 43321 111111 21112 237999999 8999999
Q ss_pred EEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeece
Q 011959 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 402 (474)
Q Consensus 325 ~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~ 402 (474)
+++++++++.+.. .....+++.+.+.+.++..+++..+. ..+.+.++++.+.+.+.|++. ++....+..|.
T Consensus 244 ~~~~~~l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~g~~ 316 (387)
T PRK07777 244 ACGPAPLIAAVRA---AKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA----GFEVHDSAGTY 316 (387)
T ss_pred EecCHHHHHHHHH---HHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC----CCCccCCCcce
Confidence 9999999887763 22333555666677676666653211 234455666666666666553 32222233455
Q ss_pred eEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC---------CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~---------~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
++++.+..... ....++++.|+ ++||.+.|+. .+.+|+++..+++++++++++|.++..
T Consensus 317 ~~~~~~~~~~~-----------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 317 FLCADPRPLGY-----------DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRG 385 (387)
T ss_pred EEEecccccCC-----------CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 56666532110 01257888887 5799998763 235789888899999999999998754
No 162
>PRK09105 putative aminotransferase; Provisional
Probab=99.94 E-value=1.4e-24 Score=215.85 Aligned_cols=318 Identities=17% Similarity=0.170 Sum_probs=205.0
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHh
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~ 177 (474)
+.++++..|. ++++ .+|.+++++.+.+.....| +.....+|.+.++++++ ..++|++++|+++++..+++. .
T Consensus 43 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y--~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~--l 115 (370)
T PRK09105 43 EGAVFLNANE--CPLG-PSPAARDAAARSAALSGRY--DLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLA--F 115 (370)
T ss_pred CCcEEecCCC--CCCC-CCHHHHHHHHHHHHHhcCC--CCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHH--H
Confidence 4456666663 3454 6889999998877654334 33336788888888876 678999999999999999984 2
Q ss_pred hcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccC
Q 011959 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (474)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (474)
...+++|++.+++|.++.. .....|..+..++. ..+. ..|++++++.. ++++++++..++|
T Consensus 116 ~~~gd~Vli~~P~y~~~~~-~~~~~g~~~~~v~~--~~~~------------~~d~~~l~~~~----~~~~~v~l~nP~N 176 (370)
T PRK09105 116 TSPTAGLVTADPTYEAGWR-AADAQGAPVAKVPL--RADG------------AHDVKAMLAAD----PNAGLIYICNPNN 176 (370)
T ss_pred cCCCCEEEEeCCChHHHHH-HHHHcCCeEEEecC--CCCC------------CCCHHHHHhcC----CCCCEEEEeCCCC
Confidence 3456789998988876533 33444443332211 1110 01677776542 2455666655678
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHHHH
Q 011959 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIME 333 (474)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i~~ 333 (474)
++|.+.+.++ ++++.+.|+ ++++||+||+|..|... ....+..+..++++ +|||.+| .|+|+||+++++++++
T Consensus 177 PTG~~~~~~~-l~~l~~~~~-~~~~lIvDEaY~~f~~~-~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~ 253 (370)
T PRK09105 177 PTGTVTPRAD-IEWLLANKP-AGSVLLVDEAYIHFSDA-PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLA 253 (370)
T ss_pred CCCcCcCHHH-HHHHHHhCC-CCcEEEEECchHHhccC-cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHH
Confidence 8999887555 777777654 59999999999766211 11122222234544 7999998 8999999999999999
Q ss_pred hhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCC
Q 011959 334 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (474)
Q Consensus 334 ~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (474)
.+.. . ..++.+.+++.++.++|+..+- +...++++++.+++.+.|++ +++. ..++.|.++.+.+..
T Consensus 254 ~l~~---~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~-~~~~~~~f~~~~~~~-- 320 (370)
T PRK09105 254 KLAR---F---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKK----KGYK-CTPSQANCFMVDVKR-- 320 (370)
T ss_pred HHHh---c---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCC-cCCCCCcEEEEeCCC--
Confidence 8873 2 2345677777887777753110 22334444445555555544 3432 234567776654421
Q ss_pred CcCcccccccchHHHHHHHHHHHHCCeEeccc---CCcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---QFEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---~~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
...++++.|+++||.+... ..+++|+++. +++++++++++|+++++
T Consensus 321 -------------~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~-~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 321 -------------PAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG-SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred -------------CHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHhh
Confidence 0257889999999998422 1346788866 67889999999988763
No 163
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=2.9e-24 Score=212.68 Aligned_cols=320 Identities=16% Similarity=0.173 Sum_probs=207.2
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHh
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~ 177 (474)
..++||..|. +.++. ++.+.+++.+.+.....| +.....+|.+.++++++ ..++|++++|+++++..+++.
T Consensus 19 ~~~~~l~~~~--~~~~~-p~~~~~a~~~~~~~~~~Y--~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~--- 90 (354)
T PRK06358 19 NMILDFSANI--NPLGV-PESLKQAITENLDKLVEY--PDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKV--- 90 (354)
T ss_pred cceEEecCCC--CCCCC-CHHHHHHHHHHHHhhhcC--CCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH---
Confidence 3478987764 45553 789999999887654434 33334677777777775 678999999999999999884
Q ss_pred hcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccC
Q 011959 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (474)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (474)
+ .++.|++.+++|+.+...+ ...|..+...+.....++ .. | +++.+.+.. +++++++..++|
T Consensus 91 ~-~~~~v~i~~P~y~~~~~~~-~~~g~~~~~~~~~~~~~~-----------~~-d-~~~~~~~~~---~~~~v~~~~P~N 152 (354)
T PRK06358 91 T-KPKKVLILAPTFAEYERAL-KAFDAEIEYAELTEETNF-----------AA-N-EIVLEEIKE---EIDLVFLCNPNN 152 (354)
T ss_pred h-CCCcEEEecCChHHHHHHH-HHcCCeeEEEeCccccCC-----------Cc-c-HHHHHhhcc---CCCEEEEeCCCC
Confidence 4 3468999999998754333 333433222111000010 01 4 344444432 355554444478
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCcee---ehhhhcC-CCcceEEEEe-cHH
Q 011959 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLT---TLGKIIG-GGLPVGAYGG-RRD 330 (474)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~-~~~ 330 (474)
++|.+.+.++ +++|.++|++|+++||+||+|..| ..+... .....+..++++ +|||.++ +|+|+||+++ ++.
T Consensus 153 PtG~~~~~~~-~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~ 231 (354)
T PRK06358 153 PTGQLISKEE-MKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKN 231 (354)
T ss_pred CCCCccCHHH-HHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHH
Confidence 8898887666 999999999999999999999988 443211 111222223443 7999999 9999999987 467
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEe
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (474)
+++.+... . ..++.+.+++.++.++|+.-.. ....+.++++.+.+.+.|++ ++.....++.|.++++.+.
T Consensus 232 ~~~~~~~~---~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~g~f~~~~~~ 302 (354)
T PRK06358 232 LAEKLLQM---R--EPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSE----FKGIKVYKPSVNFIFFKLE 302 (354)
T ss_pred HHHHHHHh---C--CCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEEcCCcceEEEEEcC
Confidence 87777632 1 2466788888888888742110 22334444455555555543 3222223456778777663
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC------cceEEecCCcHHHHHHHHHHHHHHH
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
+ ..++.+.|+++||.+.++.. +++|++ ..++++.++++++|++++
T Consensus 303 ~----------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls-~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 303 K----------------PIDLRKELLKKGILIRSCSNYRGLDENYYRVA-VKSREDNKKLLKALEVIL 353 (354)
T ss_pred c----------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE-eCCHHHHHHHHHHHHHHh
Confidence 2 14788899999999998631 246666 457788999999998875
No 164
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=5.2e-24 Score=213.73 Aligned_cols=330 Identities=13% Similarity=0.071 Sum_probs=215.5
Q ss_pred EEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---C-CCeEEEeCCHHHHHHHH
Q 011959 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---S-IEMVRFVNSGTEACMGV 171 (474)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~-~~~v~~~~sGseA~~~a 171 (474)
++|+..|. ..+. .++.+.+|+.+.+.... .|. +..+++.++++++++.++ . .+.+++++|+++++..+
T Consensus 29 ~~~l~~g~--~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 29 TISLGQGV--VSYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA 105 (389)
T ss_pred eEEccCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence 56776663 2233 57889999988776432 222 235778889999988765 2 56899999999999988
Q ss_pred HHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE
Q 011959 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (474)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (474)
++.. ..+++.|++.+++|..+.. .....|..+..++.....+ -|++++++.++. ++++|+
T Consensus 106 ~~~~--~~~gd~Vlv~~P~y~~~~~-~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~~i~~---~~klv~ 165 (389)
T PRK05957 106 ILAI--TDPGDEIILNTPYYFNHEM-AITMAGCQPILVPTDDNYQ--------------LQPEAIEQAITP---KTRAIV 165 (389)
T ss_pred HHHh--cCCCCEEEEeCCCCcCHHH-HHHhcCCEEEEeecCCCCC--------------cCHHHHHHhcCc---CceEEE
Confidence 8742 3456778888888866432 3333343322211110001 178999988863 567777
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC-cc-ccccCCCCc---eeehhhhcC-CCcceEE
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GA-QEYFGVTPD---LTTLGKIIG-GGLPVGA 324 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~-~~~~g~~pd---i~t~sK~l~-~G~~iG~ 324 (474)
+..++|++|.+.+..+ +++|.++|++||++||+||+|.+| ..+.. .. ....+.... +.+|||.++ +|+|+||
T Consensus 166 ~~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 244 (389)
T PRK05957 166 TISPNNPTGVVYPEAL-LRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGY 244 (389)
T ss_pred EeCCCCCCCcCcCHHH-HHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEE
Confidence 7777888999888666 999999999999999999999888 43321 11 111122222 347999998 8999999
Q ss_pred EEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCC-eeEEeeec
Q 011959 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGH-AICGGYIS 401 (474)
Q Consensus 325 ~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~v~~~g 401 (474)
+++++++++.+.. .......+.+.+++.++..+|+.-.. ++..+.++++.+.+.+.|+++. +. ....+..|
T Consensus 245 ~~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---~~~~~~~~~gg 318 (389)
T PRK05957 245 MVIPIHLLEAIKK---IQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQ---DRCTLHPANGA 318 (389)
T ss_pred EecCHHHHHHHHH---HHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcC---CCccccCCCee
Confidence 9999999988873 22222345566788887777752110 2233444555555555554421 11 11223346
Q ss_pred eeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecC-CcHHHHHHHHHHHHHHHhh
Q 011959 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~-~t~e~i~~~l~~l~~~~~~ 473 (474)
.++|+.+... ....++++.|+ ++||.+.|+. .+++|+++. .+++++++++++|.+.+++
T Consensus 319 ~~~~~~~~~~-------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 319 FYCFLKVNTD-------------LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred EEEEEeCCCC-------------CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 6677776321 11256788887 5899999873 235788875 5899999999999998865
No 165
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=5.7e-24 Score=210.52 Aligned_cols=317 Identities=15% Similarity=0.135 Sum_probs=210.2
Q ss_pred EEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhc
Q 011959 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT 179 (474)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~ 179 (474)
.+||..|. +.++ .++.+++++.+.+.......++.....+|.+.++++++ ..++|++++|+++++..+++. ...
T Consensus 24 ~~~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~--l~~ 98 (351)
T PRK14807 24 KYKMDANE--TPFE-LPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLA--FIN 98 (351)
T ss_pred eeEccCCC--CCCC-CCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHH--hcC
Confidence 36666663 3333 57899999988776432223333335678888888776 568999999999999998884 234
Q ss_pred CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCC
Q 011959 180 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 259 (474)
Q Consensus 180 ~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~ 259 (474)
.++.|++.+++|.++ .......|..+..++.....+ -|++++++.++.+ ++++|+++.++|++
T Consensus 99 ~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~~~~~~--~~k~v~l~~p~NPt 161 (351)
T PRK14807 99 KGDVVIYPHPSFAMY-SVYSKIAGAVEIPVKLKEDYT--------------YDVGSFIKVIEKY--QPKLVFLCNPNNPT 161 (351)
T ss_pred CCCEEEEeCCChHHH-HHHHHHcCCeEEEeecCCCCC--------------CCHHHHHHHhhcc--CCCEEEEeCCCCCC
Confidence 567899999998753 333344454333221110001 1789999888642 56777777778889
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHHHHhh
Q 011959 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIMEMV 335 (474)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i~~~~ 335 (474)
|.+.+ .+++.++|++++.++|+||+|.+|. +... .......++++ +|||.++ +|+|+||+++++++++.+
T Consensus 162 G~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~-~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~ 235 (351)
T PRK14807 162 GSVIE----REDIIKIIEKSRGIVVVDEAYFEFY-GNTI-VDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYL 235 (351)
T ss_pred CCCCC----HHHHHHHHHhCCCEEEEeCcchhhc-ccch-HHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHH
Confidence 99999 7778888889889999999998772 1111 11111123333 7999998 899999999999999988
Q ss_pred cCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcC
Q 011959 336 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 415 (474)
Q Consensus 336 ~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~ 415 (474)
.... ..++.+++++.++.+.|+...-++..++++++.+.+.+.|+++ .++. ..++.|.++++.+.+
T Consensus 236 ~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~---~g~~-~~~~~~~~~~i~~~~----- 301 (351)
T PRK14807 236 NLVK-----SPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKI---PGIK-VYPSKTNFILVKFKD----- 301 (351)
T ss_pred HHcc-----CCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC---CCcE-ECcCCccEEEEEcCC-----
Confidence 7321 1345678888888888763111333444555555555555432 1222 234567777776631
Q ss_pred cccccccchHHHHHHHHHHHHCCeEecccC-----CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 416 FEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
...+.+.|+++||.+.+.. .+++|+++. +.++.+++++.|++++
T Consensus 302 -----------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 302 -----------ADYVYQGLLERGILVRDFSKVEGLEGALRITVS-SCEANDYLINGLKELL 350 (351)
T ss_pred -----------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC-CHHHHHHHHHHHHHhh
Confidence 2567888999999997653 245788765 5678899999998764
No 166
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.6e-24 Score=213.85 Aligned_cols=319 Identities=16% Similarity=0.083 Sum_probs=209.0
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHh
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~a 175 (474)
.+..+|||..|. ++++ .+|.+++++.+. .....| +.....+|.+.+++++. ..++|++++|+++++..+++.
T Consensus 50 ~~~~~i~l~~n~--~p~~-~~~~v~~a~~~~-~~~~~Y--p~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~- 122 (380)
T PLN03026 50 KPEDIVKLDANE--NPYG-PPPEVLEALGNM-KFPYVY--PDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRC- 122 (380)
T ss_pred CccceEEccCCC--CCCC-CCHHHHHHHHhh-HhhccC--CCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHH-
Confidence 466889998874 4555 678898888652 222223 33335678888888776 578999999999999999874
Q ss_pred HhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011959 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
....++.|++.+++|..+. ......|..+..++.....+ .|++++++.++. +++++|+++++
T Consensus 123 -~~~~gd~Vlv~~P~y~~y~-~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~~~~~--~~~~~v~l~~P 184 (380)
T PLN03026 123 -VLDPGDKIIDCPPTFGMYV-FDAAVNGAEVIKVPRTPDFS--------------LDVPRIVEAVET--HKPKLLFLTSP 184 (380)
T ss_pred -hcCCCCEEEEcCCChHHHH-HHHHHcCCEEEEeecCCCCC--------------cCHHHHHHHHhc--cCCcEEEEeCC
Confidence 2345578898898886432 22333444332221110001 178999888842 25677777777
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRD 330 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~ 330 (474)
+|++|.+.+ .+++.++++.. ++||+||+|..| ..+... ....-.++++ ||||.+| +|+|+||++++++
T Consensus 185 ~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~--~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~ 257 (380)
T PLN03026 185 NNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRM--KWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLS 257 (380)
T ss_pred CCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchH--HHHHhCCCEEEEecchHhhcCccccceeeecCHH
Confidence 888999998 56666777654 899999999887 433211 1111123333 7999999 8999999999999
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEe
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (474)
+++.+.... ..++.+.+++.++.++|+..+. ++..+.++++++++.+.|++ ++.....+..|+++++.+.
T Consensus 258 ~i~~l~~~~-----~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~~~f~~~~~~ 328 (380)
T PLN03026 258 IIEYLWRAK-----QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKE----VPFLEPYPSDANFILCRVT 328 (380)
T ss_pred HHHHHHHhc-----CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCCeECCCCCeEEEEECC
Confidence 998886321 2466788888888888853111 23344455555555555554 3322223556778777764
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHH
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
.. ....++.+.|+++||.+.++. .+++|+++. +.++++++++.|+++
T Consensus 329 ~~-------------~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~-~~~~~~~l~~al~~~ 379 (380)
T PLN03026 329 SG-------------RDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG-KPEHTDALMEALKQL 379 (380)
T ss_pred CC-------------CCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC-CHHHHHHHHHHHHHh
Confidence 21 012568888999999998753 245788866 677888998888764
No 167
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.94 E-value=4.9e-24 Score=212.22 Aligned_cols=315 Identities=14% Similarity=0.085 Sum_probs=203.5
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC----CCCeEEEeCCHHHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMG 170 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~la~~l~~~~~----~~~~v~~~~sGseA~~~ 170 (474)
+..++||..+ ++....++.+.+++.+.... ..|+ +..++++.+++++.+.++ ..++|++|+|+++++..
T Consensus 26 ~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~ 101 (364)
T PRK07865 26 PDGIVDLSVG---TPVDPVPPVIQEALAAAADA-PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW 101 (364)
T ss_pred CCCEEEcCCC---CCCCCCCHHHHHHHHHHHhh-CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHH
Confidence 3456788777 44444578888988775533 2333 234778889998887643 36799999999999988
Q ss_pred HHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEE
Q 011959 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (474)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (474)
++.+. ....++.|++.+++|.+..... ...|.. +..+ +++++++. .++++|
T Consensus 102 ~~~~l-~~~~gd~Vl~~~p~y~~~~~~~-~~~g~~-------------------~~~~--~~~~~l~~------~~~~~v 152 (364)
T PRK07865 102 LPTLL-GLGPGDVVVIPELAYPTYEVGA-RLAGAT-------------------VVRA--DSLTELGP------QRPALI 152 (364)
T ss_pred HHHHH-cCCCCCEEEECCCCcccHHHHH-HhcCCE-------------------EEec--CChhhCCc------ccceEE
Confidence 76631 1245678888888887643322 222221 2222 23333322 256788
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc-ccc--cCCC-Cce---eehhhhcC-CCcc
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEY--FGVT-PDL---TTLGKIIG-GGLP 321 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~--~g~~-pdi---~t~sK~l~-~G~~ 321 (474)
++++++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+.... ... .+.. +.+ .+|||.++ +|+|
T Consensus 153 ~~~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 231 (364)
T PRK07865 153 WLNSPSNPTGRVLGVDH-LRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYR 231 (364)
T ss_pred EEcCCCCCCCccCCHHH-HHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCcee
Confidence 88777888999988666 999999999999999999999877 4332211 111 0111 222 27999997 8999
Q ss_pred eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeee
Q 011959 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (474)
+||+++++++++.+.. ......++.+++.+.++.++|+..+. +..++.++++.+.+.+.|++ +++....+..
T Consensus 232 iG~i~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~ 304 (364)
T PRK07865 232 AGFVAGDPALVAELLE---VRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEA----AGFRVDHSEA 304 (364)
T ss_pred eEEEecCHHHHHHHHH---HHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCc
Confidence 9999999999888763 22223456688888887777642110 22333444444444444443 4433222334
Q ss_pred ceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------CcceEEecCCcHHHHHHHHHHHH
Q 011959 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAE 468 (474)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~ 468 (474)
|.++++.+... ...+.+.|.++||++.|+. .+++|+++..+++++++++++|.
T Consensus 305 ~~~~~~~~~~~---------------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 305 GLYLWATRGED---------------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred cEEEEEeCCCC---------------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 55666654211 1456788889999998853 23578888778999999999885
No 168
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.93 E-value=1.2e-24 Score=218.82 Aligned_cols=332 Identities=14% Similarity=0.100 Sum_probs=206.5
Q ss_pred EEEeccCChhhccCCCCC--HHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCCeE--EEeCCHHHH
Q 011959 100 EYIDYVGSWGPAIIGHAD--DQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIEMV--RFVNSGTEA 167 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v--~~~~sGseA 167 (474)
..|||..|...++-++.+ +.+.+++.+.++... .|+ +..++++++++++.+... ..+++ ++|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 457888875433433333 678888877765422 232 345677778877765542 35666 999999999
Q ss_pred HHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC--CCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCC
Q 011959 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL--PDSPGVPKGATYETLTAPFNDVSALENLFENNKG 245 (474)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~--~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 245 (474)
+..++++......++.|++.+++|.++.. .+...|..+..++. +...++ |++.+++.+++.+.
T Consensus 107 l~~~~~~l~~~~pGd~Vlv~~P~y~~~~~-~~~~~g~~~v~v~~~~~~~~~~--------------d~~~l~~~~~~~~~ 171 (396)
T PRK09257 107 LRVGADFLKRAFPDAKVWVSDPTWPNHRA-IFEAAGLEVKTYPYYDAATKGL--------------DFDAMLADLSQAPA 171 (396)
T ss_pred HHHHHHHHHHhCCCCeEEECCCCcccHHH-HHHHcCCcEEEEeccccccCcc--------------CHHHHHHHHHhCCC
Confidence 99998743223567889999999988643 34444544333221 111111 78999998875433
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc-CC-Cccc-cccCCCCce---eehhhhcC-
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AY-GGAQ-EYFGVTPDL---TTLGKIIG- 317 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~-g~-~~~~-~~~g~~pdi---~t~sK~l~- 317 (474)
+..++++...+|++|.+.+.++ +++|.++|++||++||+||+|.+| .. +. .... ...+..+++ .+|||.++
T Consensus 172 ~~~~~i~~~p~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~ 250 (396)
T PRK09257 172 GDVVLLHGCCHNPTGADLTPEQ-WDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGL 250 (396)
T ss_pred CCEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCcc
Confidence 4556666777888998887666 999999999999999999999887 32 11 1111 111122233 37999999
Q ss_pred CCcceEEEEe---cHHH----HHhhcCCCCcccccCCCCChHHHHHHHHHHHHh------cC--CCHHHHHHHHHHHHHH
Q 011959 318 GGLPVGAYGG---RRDI----MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL------KE--PGTYEYLNKITGELTQ 382 (474)
Q Consensus 318 ~G~~iG~~~~---~~~i----~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~------~~--~~~~~~~~~~~~~l~~ 382 (474)
+|||+||+++ +++. ++.+. ........+.+++.+.++.+.|+.- .+ ++.+++++++++.+.+
T Consensus 251 ~GlRiG~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~ 327 (396)
T PRK09257 251 YGERVGALSVVAEDAEEADRVLSQLK---ATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVE 327 (396)
T ss_pred ccccceeEEEEeCCHHHHHHHHHHHH---HHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999973 4443 33332 1112223345677777777666421 01 2344555555555666
Q ss_pred HHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEecC-CcHHHHH
Q 011959 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQ 461 (474)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~-~t~e~i~ 461 (474)
.|++......+....+..|.++|+.+.. ..+.+.+.++||++.|.+ |+++. .++++|+
T Consensus 328 ~L~~~~~~~~~~~~~p~gg~~~w~~l~~-----------------~~~~~l~~~~~V~~~p~~----ri~~~~~~~~~i~ 386 (396)
T PRK09257 328 ALKAKGPSRDFDFIARQRGMFSYSGLTP-----------------EQVDRLREEFGVYAVGSG----RINVAGLNESNID 386 (396)
T ss_pred HHHhcCCCCCcccccccceEEEecCCCH-----------------HHHHHHHHcCCEEEcCCC----eEEEeeCCHHHHH
Confidence 6655421101222234456667765521 233444467799998853 77765 8999999
Q ss_pred HHHHHHHHHH
Q 011959 462 HTITAAEKVL 471 (474)
Q Consensus 462 ~~l~~l~~~~ 471 (474)
+++++|.+++
T Consensus 387 ~~~~~i~~~~ 396 (396)
T PRK09257 387 YVAEAIAAVL 396 (396)
T ss_pred HHHHHHHhhC
Confidence 9999998763
No 169
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.93 E-value=4.5e-24 Score=211.09 Aligned_cols=314 Identities=17% Similarity=0.171 Sum_probs=207.7
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHh
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~ 177 (474)
.++|||..|. +.++ .+|++++++.+++.....|+.+. ..++.+.++++++ ..+++++++|+++++..+++..
T Consensus 19 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y~~~~--~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l-- 91 (346)
T TIGR01141 19 KEVIKLNSNE--NPFG-PPPKAKEALRAEADKLHRYPDPD--PAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF-- 91 (346)
T ss_pred CceEEccCCC--CCCC-CCHHHHHHHHHhHHHhhcCCCCC--HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh--
Confidence 4799999873 3444 58899999999876544443322 2567777777775 5678999999999998888742
Q ss_pred hcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccC
Q 011959 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (474)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (474)
...+++|++.+++|..+ .......|..+...+... .+ ..|++.+++.+. +++++|+++.++|
T Consensus 92 ~~~gd~v~~~~p~y~~~-~~~~~~~g~~~~~~~~~~-~~-------------~~d~~~l~~~~~---~~~~~v~l~~p~N 153 (346)
T TIGR01141 92 LEPGDAVLVPPPTYSMY-EISAKIHGAEVVKVPLDE-DG-------------QLDLEDILVAID---DKPKLVFLCSPNN 153 (346)
T ss_pred cCCCCEEEEcCCCHHHH-HHHHHHcCCeEEEeccCC-CC-------------CCCHHHHHHhcC---CCCCEEEEeCCCC
Confidence 24567888888887532 222233343332211110 01 127899988764 3577788777788
Q ss_pred CCCcccCCHHHHHHHHHHHHHh--CCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHH
Q 011959 258 NSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRD 330 (474)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~ 330 (474)
++|.+.+ ++++.++|+.+ |+++|+||+|.+| ..+... ......++++ ++||.++ +|+|+||++++++
T Consensus 154 ptG~~~~----~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~ 227 (346)
T TIGR01141 154 PTGNLLS----RSDIEAVLERTPEDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAE 227 (346)
T ss_pred CCCCCCC----HHHHHHHHHhCCCCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEehhhHhhhchhhhceeeecCHH
Confidence 8999998 55566666555 9999999999877 332111 1122223433 7999997 7999999999999
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEe
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (474)
+++.+... ..+++.+++++.++.++++.... ....++++++.+++++.|++. . ++. ..+..|.++++++.
T Consensus 228 ~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~-~~~~~g~~~~~~~~ 298 (346)
T TIGR01141 228 IIDALNKV-----RAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL-P--GLE-VYPSDANFVLIRFP 298 (346)
T ss_pred HHHHHHhc-----cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc-C--CCE-ECCCcCCEEEEecC
Confidence 99888732 12466788898888877754321 234455555555555555543 1 222 23445777777763
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----CcceEEecCCcHHHHHHHHHHHH
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTITAAE 468 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~~~~~~t~e~i~~~l~~l~ 468 (474)
. ...++.+.|.++||++.++. ...+|+++. ++++++++++.|+
T Consensus 299 ~---------------~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 299 R---------------DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred C---------------CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHhC
Confidence 2 12578889999999998864 246788865 8899999998763
No 170
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.93 E-value=9.8e-24 Score=214.40 Aligned_cols=337 Identities=18% Similarity=0.184 Sum_probs=228.6
Q ss_pred cCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-----CCC---CCCCHHHHHHHHHHHhhCC---CCCeEEEeCCH
Q 011959 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-----TSF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSG 164 (474)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-----~~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~sG 164 (474)
.+....+||..++. .+--.......+++.+.+... ..+ .+..+++..+++++....+ .+++|++|+|.
T Consensus 86 ~~~~~~i~f~~g~p-~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 86 EDDPSVIDFAGGLP-DPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred cCCCceecCCCCCC-CcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCH
Confidence 34467889998863 221124556666666655431 111 1345677788888874433 56799999999
Q ss_pred HHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC
Q 011959 165 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (474)
Q Consensus 165 seA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (474)
.+|++.++++ ....++.|++-+++|++. ...+...|..+..++.. ..|+ |+++||+.++++
T Consensus 165 q~al~l~~~~--l~~pGd~v~vE~PtY~~~-~~~~~~~g~~~~~vp~d-~~G~--------------~~e~le~~~~~~- 225 (459)
T COG1167 165 QQALDLLLRL--LLDPGDTVLVEDPTYPGA-LQALEALGARVIPVPVD-EDGI--------------DPEALEEALAQW- 225 (459)
T ss_pred HHHHHHHHHH--hCCCCCEEEEcCCCcHHH-HHHHHHcCCcEEecCCC-CCCC--------------CHHHHHHHHhhc-
Confidence 9999999984 233467777778899984 44444445544332221 3343 899999999875
Q ss_pred CCeEEEEEcccc-CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc----cccccCCCCceeehhhhcCC
Q 011959 245 GEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG----AQEYFGVTPDLTTLGKIIGG 318 (474)
Q Consensus 245 ~~~a~vi~ep~~-~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~----~~~~~g~~pdi~t~sK~l~~ 318 (474)
+++++.+.|.+ |++|.+++.+. .++|.++|++||+++|.||+|..| ..+..- +.+..+-...+.||||.+.+
T Consensus 226 -~~k~~y~~P~~qNPtG~tms~~r-R~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~P 303 (459)
T COG1167 226 -KPKAVYVTPTFQNPTGVTMSLER-RKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAP 303 (459)
T ss_pred -CCcEEEECCCCCCCCCCccCHHH-HHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhccc
Confidence 68899999955 66899888777 999999999999999999999888 443322 11111223335589999999
Q ss_pred CcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH---HHHHHhhhcC---
Q 011959 319 GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ---GIIDAGKKAG--- 392 (474)
Q Consensus 319 G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~---~L~~~~~~~~--- 392 (474)
|+|+||+++++++++.+. ...+..+.+.+.+.+.+...-+. +..+.+++++.++.+++ .+.+.+.++.
T Consensus 304 glRlG~vv~p~~~~~~~~---~~k~~~~~~~s~~~Q~~la~~l~---~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~ 377 (459)
T COG1167 304 GLRLGYVVAPPELIEKLL---RLKQAADLGPSSLSQAALAAFLL---SGHYDRHLRRLRREYARRRDALLEALAEYLPEL 377 (459)
T ss_pred ccceeeeeCCHHHHHHHH---HHHHHhcCCCChHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999887 34455677778888777766665 22333343333333333 3333333332
Q ss_pred CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC---------CcceEEecCC-cHHHHHH
Q 011959 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---------FEAGFTSLAH-SSDDIQH 462 (474)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------~~~~~~~~~~-t~e~i~~ 462 (474)
..+..+..|+++|+.+... ....++.+.++++||.+.+.+ .+.+++++.. +++++++
T Consensus 378 ~~~~~p~gG~flwl~l~~~-------------~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~ 444 (459)
T COG1167 378 ATWTRPEGGLFLWLELPEG-------------IDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEE 444 (459)
T ss_pred eeeecCCceEEEEEEcCCC-------------CCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHH
Confidence 2334555688999988543 123678899999999998832 1246776544 7999999
Q ss_pred HHHHHHHHHhh
Q 011959 463 TITAAEKVLRQ 473 (474)
Q Consensus 463 ~l~~l~~~~~~ 473 (474)
++++|.+++++
T Consensus 445 gi~~l~~~~~~ 455 (459)
T COG1167 445 GIKRLAALLRE 455 (459)
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 171
>PRK07550 hypothetical protein; Provisional
Probab=99.93 E-value=7.7e-24 Score=212.48 Aligned_cols=332 Identities=16% Similarity=0.119 Sum_probs=212.3
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 169 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~ 169 (474)
|..++||.++.. .+. .++.+.+++.+.+.... .|+ +..+++..+++++.+.++ ..++|++++|+++|+.
T Consensus 28 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 104 (386)
T PRK07550 28 DGPLIDLSQAVP--GYP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFW 104 (386)
T ss_pred CCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 445688888742 222 47788888888765321 232 345677888888877653 4689999999999999
Q ss_pred HHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEE
Q 011959 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (474)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (474)
.+++.. ...++.|++.+++|.++.. .+...|..+..++.....+. ..|++++++.++. ++++
T Consensus 105 ~~~~~l--~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~v~~~~~~~~------------~~~~~~l~~~~~~---~~~~ 166 (386)
T PRK07550 105 AAMVTL--AGAGDEVILPLPWYFNHKM-WLDMLGIRPVYLPCDEGPGL------------LPDPAAAEALITP---RTRA 166 (386)
T ss_pred HHHHHh--cCCCCEEEEcCCCCcchHH-HHHhcCCEEEEEecCCCcCC------------CCCHHHHHHHhcc---cCcE
Confidence 998842 3456778888888866533 33344443322211100111 0178889998874 3455
Q ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC-Cc-cccccCCCCc---eeehhhhcC-CCcce
Q 011959 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GG-AQEYFGVTPD---LTTLGKIIG-GGLPV 322 (474)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~-~~~~~g~~pd---i~t~sK~l~-~G~~i 322 (474)
|++..++|++|.+.+.+ .+++|.++|++||++||+||+|.+| ..+. .. .....+...+ +.+|||.++ +|+|+
T Consensus 167 v~~~~P~NPtG~~~~~~-~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~Ri 245 (386)
T PRK07550 167 IALVTPNNPTGVVYPPE-LLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRV 245 (386)
T ss_pred EEEeCCCCCCCcccCHH-HHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccce
Confidence 45444557788877644 4999999999999999999999887 3221 11 1111111222 348999999 89999
Q ss_pred EEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeee
Q 011959 323 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (474)
Q Consensus 323 G~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (474)
||+++++++++.+.. .....+.+.+.+++.++...++.+++ +...+.++++.+.+.+.|.+. .++ ...+..
T Consensus 246 G~i~~~~~~~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~-~~~~~g 318 (386)
T PRK07550 246 GAVVASPARIAEIEK---FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL---PGW-ELLASG 318 (386)
T ss_pred EeeecCHHHHHHHHH---HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC---CCc-eeCCCc
Confidence 999999999887763 22333556678888888877754322 233444555555555555543 122 112334
Q ss_pred ceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecC-CcHHHHHHHHHHHHHH
Q 011959 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKV 470 (474)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~-~t~e~i~~~l~~l~~~ 470 (474)
|.++|+.+.... ....++++.|+ ++||.+.|+. ...+|+++. .+++++++++++|.++
T Consensus 319 ~~~~~~~~~~~~------------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 319 AYFAYVRHPFPD------------RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred eEEEEecCCCCC------------CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 566676653211 11256777765 6799998852 346788876 4799999999999875
No 172
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.93 E-value=7.7e-24 Score=217.79 Aligned_cols=331 Identities=12% Similarity=0.052 Sum_probs=203.2
Q ss_pred CHHHHHHHHHHHHhc----CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHhHhh-cCCcEEE
Q 011959 117 DDQVLAALGETMKKG----TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAF-TGRERII 185 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~----~~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al~~ar~~-~~~~~ii 185 (474)
+..+++++.+.++.. ..|+ +..++++++++++.+..+ ..++|++|+|+++|+..+++. .. ..++.|+
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~--l~~~~gD~Vl 167 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQL--LIGDPSDGVM 167 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHH--hccCCCCEEE
Confidence 457778777666542 1122 235678888888876543 578999999999999999984 22 3567899
Q ss_pred EEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC---CCCeEEEEEccccCCCCcc
Q 011959 186 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFI 262 (474)
Q Consensus 186 ~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i 262 (474)
+.+++|.++... +...|..+..++.....++ . -|+++|++.++.. ..+++++++..++|++|.+
T Consensus 168 v~~P~y~~y~~~-~~~~g~~~v~v~~~~~~~~---------~---~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~ 234 (481)
T PTZ00377 168 IPIPQYPLYSAA-ITLLGGKQVPYYLDEEKGW---------S---LDQEELEEAYEQAVRNGITPRALVVINPGNPTGQV 234 (481)
T ss_pred ECCCCchhHHHH-HHHcCCEEEEEEeccccCC---------C---CCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcC
Confidence 989999875433 3334433322211111111 0 1789999988631 1256665555557889988
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccC-CCc-cc-cc-cCCCC------cee---ehhhhc-C-CCcceEEEE
Q 011959 263 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGG-AQ-EY-FGVTP------DLT---TLGKII-G-GGLPVGAYG 326 (474)
Q Consensus 263 ~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g-~~~-~~-~~-~g~~p------di~---t~sK~l-~-~G~~iG~~~ 326 (474)
.+.++ +++|.++|++||++||+||+|..+ ..+ ..+ .. .. .++.+ .++ +|||++ + +|||+||++
T Consensus 235 ~s~e~-~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~ 313 (481)
T PTZ00377 235 LTRDV-MEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFE 313 (481)
T ss_pred CCHHH-HHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEE
Confidence 87666 999999999999999999999877 432 221 11 10 11211 233 699985 6 799999998
Q ss_pred e---cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-C----CHHHH-------HHHHHHHHHHHHHHHhhhc
Q 011959 327 G---RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-P----GTYEY-------LNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 327 ~---~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~----~~~~~-------~~~~~~~l~~~L~~~~~~~ 391 (474)
+ ++++++.+... . ...++.|++++.++.++|+.... + .+.++ ++++.+.+.+.|+++ .
T Consensus 314 ~~~~p~~li~~l~~~---~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~---~ 386 (481)
T PTZ00377 314 LTNIPPEVREQIYKL---A-SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKI---E 386 (481)
T ss_pred EeCCCHHHHHHHHHH---h-heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 6 89998888632 1 22346788999999888853211 1 12222 334444444444432 1
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccc--cccchHHHHHH-HHHHHHCCeEecccC-------CcceEEecCCcHHHHH
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDA--KKSETTKFARF-YRGMLEEGVYFAPSQ-------FEAGFTSLAHSSDDIQ 461 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~-~~~l~~~Gv~v~~~~-------~~~~~~~~~~t~e~i~ 461 (474)
++....+..|+++|+.+..+. ..... ...... ...+ .+.|.++||.+.|+. .+++|+++..++++++
T Consensus 387 g~~~~~p~gg~fl~~~~~l~~--~~~~~~~~~~~~~-~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~ 463 (481)
T PTZ00377 387 GVSCQPVEGAMYAFPRIELPE--KAIQEAKERGLAP-DVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIE 463 (481)
T ss_pred CcEeecCCeeEEEEeeccCch--hhHHHHHhcCCCc-HHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHH
Confidence 333223334566665543110 00000 000000 1223 455567899998863 1358898888889999
Q ss_pred HHHHHHHHHHhh
Q 011959 462 HTITAAEKVLRQ 473 (474)
Q Consensus 462 ~~l~~l~~~~~~ 473 (474)
+++++|.+++++
T Consensus 464 ~~l~rl~~~~~~ 475 (481)
T PTZ00377 464 EMVKKIKEFHES 475 (481)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 173
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.93 E-value=5e-24 Score=208.95 Aligned_cols=302 Identities=15% Similarity=0.097 Sum_probs=199.6
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhh
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 178 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~ 178 (474)
.++||+.+|. +++|...+.+.+ ..+.. | +... .+|.+.+++++ +.++|++++|+++++..++. .
T Consensus 20 ~~~i~l~~ne--~p~~~~~~~~~~---~~~~~---y--p~~~-~~Lr~~ia~~~-~~~~I~it~Gs~~al~~~~~---~- 83 (330)
T PRK05664 20 ADWLDLSTGI--APWPWPVPAIPA---DAWAR---L--PETD-DGLEAAARAYY-GAPQLLPVAGSQAAIQALPR---L- 83 (330)
T ss_pred HHheeecCCc--CCCCCCCcccCH---HHHHh---C--CCCh-HHHHHHHHHHh-CCCCEEECcCHHHHHHHHHH---c-
Confidence 3578888887 777876444432 22222 2 2222 56777777777 57899999999999988764 2
Q ss_pred cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCC
Q 011959 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (474)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (474)
..++.|++.+|+|.+....+ ...|. +++.+| ++++++.+++ ....++++| +|+
T Consensus 84 ~~gd~v~v~~P~y~~~~~~~-~~~g~-------------------~~~~v~---~~~~~~~~~~---~~~v~l~nP-~NP 136 (330)
T PRK05664 84 RAPGRVGVLSPCYAEHAHAW-RRAGH-------------------QVRELD---EAEVEAALDS---LDVLVVVNP-NNP 136 (330)
T ss_pred cCCCEEEEcCCChHHHHHHH-HHcCC-------------------eEEEec---hhhHhhhhcC---CCEEEEeCC-cCC
Confidence 35678999999998754332 22232 234443 3456666542 224566666 478
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHHHH
Q 011959 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIME 333 (474)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i~~ 333 (474)
+|.+.+.++ +++|.++|+++|++||+||+|.++ ...... . +.-.++++ ||||++| +|+|+||+++++++++
T Consensus 137 TG~~~s~~~-l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~--~-~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~ 212 (330)
T PRK05664 137 TGRRFDPAR-LLAWHARLAARGGWLVVDEAFMDNTPQHSLA--A-CAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLR 212 (330)
T ss_pred CCCccCHHH-HHHHHHHHHhcCCEEEEECCcccCCCccccc--c-cccCCCEEEEeeccccccCCCcceEEEEeCHHHHH
Confidence 898887666 999999999999999999999877 322111 1 11123433 7999999 8999999999999999
Q ss_pred hhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCC
Q 011959 334 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (474)
Q Consensus 334 ~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (474)
.+... ..+++.+.+++.++.++|+.... +..++.++++.+++.+.|++ +++.. ..+.+.++++.+.
T Consensus 213 ~~~~~-----~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~-~~~~~~f~~~~~~--- 279 (330)
T PRK05664 213 ALAEL-----LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRR----HGLTP-AGGCALFQWVRTE--- 279 (330)
T ss_pred HHHHh-----cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH----CCCcc-cCCcceEEEEecC---
Confidence 88732 12456678888888888863211 33445555555555555554 33321 1222345555431
Q ss_pred CcCcccccccchHHHHHHHHHHHHCCeEecccC-CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+ ...+.+.|.++||.+...+ .+++|+++..++++++++++.|+++.++
T Consensus 280 ----------~---~~~~~~~l~~~gi~v~~f~~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 280 ----------D---AAALHEFLARRGILTRLFEQPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred ----------C---HHHHHHHHHHCCeEEEECCCCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 1 2578888999999998653 3467888877888999999999887654
No 174
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=2.1e-24 Score=211.87 Aligned_cols=295 Identities=16% Similarity=0.147 Sum_probs=191.7
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhh
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 178 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~ 178 (474)
++|||..|. |+++ ...... .||.....+|.+.+++++. ..++|++++|+++++..++++ .
T Consensus 17 ~~i~l~~Ne--np~~------------~~~~~~--~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~---~ 77 (332)
T PRK06425 17 RIIDFSANI--NDFM------------DIGDIS--IYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY---I 77 (332)
T ss_pred CEEEecccc--CCCc------------Chhhcc--cCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH---h
Confidence 578888886 5553 011122 2466667889999998886 578999999999999998863 3
Q ss_pred cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC----CHHHHHHHHhcCCCCeEEEEEcc
Q 011959 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN----DVSALENLFENNKGEIAAIILEP 254 (474)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~----d~~~le~~l~~~~~~~a~vi~ep 254 (474)
++++|++.+|+|..+...+ ...|..+ ..+|.+ |.+.+ +.. ++++|+++.
T Consensus 78 -~~~~vv~~~P~y~~y~~~~-~~~G~~v-------------------~~vp~~~~~~~~~~l----~~~--~~k~v~l~n 130 (332)
T PRK06425 78 -NVGNIIIVEPNFNEYKGYA-FTHGIRI-------------------SALPFNLINNNPEIL----NNY--NFDLIFIVS 130 (332)
T ss_pred -CCCcEEEeCCChHHHHHHH-HHcCCeE-------------------EEEeCCcccCcHHHH----hhc--CCCEEEEeC
Confidence 3356888899987754433 3334322 222221 33333 222 455666666
Q ss_pred ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecH
Q 011959 255 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRR 329 (474)
Q Consensus 255 ~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~ 329 (474)
++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+........+-.++++ ||||+++ +|+|+||+++++
T Consensus 131 P~NPTG~~~s~~~-~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~ 209 (332)
T PRK06425 131 PDNPLGNLISRDS-LLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD 209 (332)
T ss_pred CCCCcCCccCHHH-HHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH
Confidence 6788998887666 999999999999999999999988 433211111122223443 7999999 999999999999
Q ss_pred HHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEE
Q 011959 330 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFG 405 (474)
Q Consensus 330 ~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~ 405 (474)
++++.+... ...++.+.+++.+ +..... +...+.++++++++.+.|++ +++....++.|++++
T Consensus 210 ~li~~l~~~-----~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~~~~~g~f~~ 276 (332)
T PRK06425 210 YNMKISRKI-----TEPWSVCDPAIDF----IRSIDLDYVAKHSLDIMENERSYLINNLEA----MGFRAAGDPSANFIT 276 (332)
T ss_pred HHHHHHHHc-----CCCCccCHHHHHH----HHHhhhHHHHHHHHHHHHHHHHHHHHHHHH----CCCEECCCCCceEEE
Confidence 999988731 1233444443322 221111 23344455555555555554 343222245688888
Q ss_pred EEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC------cceEEecCCcHHHHHHHHHHHHHHH
Q 011959 406 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 406 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
+.+.+ ..++.+.|+++||.+.++.. +++|+++. +.+++++++++|++++
T Consensus 277 ~~~~~----------------~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 277 FMIPD----------------AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR-RRSFNIKLVNALRNFL 331 (332)
T ss_pred EEcCC----------------HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence 87631 25788899999999988631 35677755 6789999999999875
No 175
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=6.5e-24 Score=210.56 Aligned_cols=319 Identities=16% Similarity=0.117 Sum_probs=203.7
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 176 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar 176 (474)
++.+|||..|. ++++ .+|.+.+++.+.+.... ..|+.....+|.+.+++++. ..++|++|+|+++++..+++.
T Consensus 23 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~-~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~-- 96 (353)
T PRK05387 23 LAKLIKLNTNE--NPYP-PSPKVLEAIRAALGDDL-RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLA-- 96 (353)
T ss_pred ccceeeccCCC--CCCC-CCHHHHHHHHHHhhhhh-hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHH--
Confidence 35688998885 3444 47899999998776422 12233333677777777775 578999999999999999984
Q ss_pred hhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcccc
Q 011959 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (474)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (474)
....++.|++.+++|..+ .......|..+..++.....+ -|++++++ ..++|++..++
T Consensus 97 l~~~gd~vlv~~P~y~~~-~~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~-------~~~~v~~~~P~ 154 (353)
T PRK05387 97 FFNHDRPLLFPDITYSFY-PVYAGLYGIPYEEIPLDDDFS--------------IDVEDYLR-------PNGGIIFPNPN 154 (353)
T ss_pred hcCCCCEEEEeCCCHHHH-HHHHHHcCCEEEEeecCCCCC--------------CCHHHHHh-------cCCEEEEeCCC
Confidence 234567788888888543 333344444332221110000 16777652 12445555557
Q ss_pred CCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCcccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHH
Q 011959 257 GNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDI 331 (474)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i 331 (474)
|++|.+.+ .+++.+|++++ ++++|+||+|..|..... ....+..++++ +|||.++ +|+|+||+++++++
T Consensus 155 NPtG~~~~----~~~~~~l~~~~~~~~livDe~y~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~ 228 (353)
T PRK05387 155 APTGIALP----LAEIERILAANPDSVVVIDEAYVDFGGESA--IPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPEL 228 (353)
T ss_pred CCCCCCCC----HHHHHHHHHhCCCcEEEEeCcccccCCcch--HHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHH
Confidence 88999998 45555556554 999999999987621111 11111123332 7999999 89999999999999
Q ss_pred HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEec
Q 011959 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (474)
Q Consensus 332 ~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (474)
++.+..... ...+++.+.+++.++.++|+..+. ++..++++++.+++.+.|++ +++. ..+..|.++++.+..
T Consensus 229 ~~~l~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~~~~~~~ 301 (353)
T PRK05387 229 IEALNRVKN--SFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEA----LGFE-VLPSKANFVFARHPS 301 (353)
T ss_pred HHHHHHhhc--cCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCe-ECCCcCcEEEEECCC
Confidence 988863211 123566788888888887752111 33445555555666666554 3432 234456666665421
Q ss_pred CCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
. ...++.+.|.++||.+.+.+ ...+|+++. +++++++++++|++++.
T Consensus 302 ~--------------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 302 H--------------DAAELAAKLRERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred C--------------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 1 12578888999999986553 235788765 77999999999999875
No 176
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.93 E-value=8.3e-24 Score=209.83 Aligned_cols=315 Identities=15% Similarity=0.100 Sum_probs=205.7
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC----CCCeEEEeCCHHHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP----SIEMVRFVNSGTEACM 169 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~la~~l~~~~~----~~~~v~~~~sGseA~~ 169 (474)
++..++|+.++ ++....+|.+.+++.+.... ..|. +..+++.++++++.++++ ..++|++|+|+++++.
T Consensus 19 ~~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~ 94 (357)
T TIGR03539 19 HPDGIVDLSVG---TPVDPVPPLIRAALAAAADA-PGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVA 94 (357)
T ss_pred CCCCeEEccCC---CCCCCCCHHHHHHHHHHHhh-CCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHH
Confidence 44567888887 44444578899988776543 2232 345778889988877643 3589999999999999
Q ss_pred HHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEE
Q 011959 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (474)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (474)
.++++. ....++.|++.+++|.+.... +...|.. ++.+ ++++.++ . +++++
T Consensus 95 ~~~~~l-~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~-------------------~~~v--~~~~~l~----~--~~~~~ 145 (357)
T TIGR03539 95 WLPTLL-GLGPGDTVVIPELAYPTYEVG-ALLAGAT-------------------PVAA--DDPTELD----P--VGPDL 145 (357)
T ss_pred HHHHHH-cCCCCCEEEECCCCcHHHHHH-HHhcCCE-------------------Eecc--CChhhcC----c--cCccE
Confidence 887731 124567888889999765433 2222321 1111 2333332 1 35788
Q ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc-ccc--cCC-CCc-ee--ehhhhcC-CCc
Q 011959 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEY--FGV-TPD-LT--TLGKIIG-GGL 320 (474)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~--~g~-~pd-i~--t~sK~l~-~G~ 320 (474)
|+++.++|++|.+.+.++ +++|.++|++||+++|+||+|.+| ..+.... ... .+. ... ++ +|||.++ +|+
T Consensus 146 v~~~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~ 224 (357)
T TIGR03539 146 IWLNSPGNPTGRVLSVDE-LRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGY 224 (357)
T ss_pred EEEeCCCCCcCccCCHHH-HHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCce
Confidence 888888888999887766 999999999999999999999877 4332211 110 011 112 22 7999996 899
Q ss_pred ceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee
Q 011959 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (474)
Q Consensus 321 ~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (474)
|+||+++++++++.+.. ......++.+.+++.++.++|+.... ......++++.+.+.+.|++ .++....+.
T Consensus 225 R~G~~i~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~----~g~~~~~p~ 297 (357)
T TIGR03539 225 RAGFVAGDPALVAELLT---VRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEK----AGFRIDHSE 297 (357)
T ss_pred eEEEEecCHHHHHHHHH---HHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCCCcCCC
Confidence 99999999999888763 22223456788888888777742110 22334444555555555544 343222233
Q ss_pred eceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------CcceEEecCCcHHHHHHHHHHH
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAA 467 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l 467 (474)
.|.++++.+.. ....+.+.|.++||.+.|+. .+++|+++..+++++++++++|
T Consensus 298 ~~~~~~~~~~~---------------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 298 AGLYLWATRGE---------------DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred ccEEEEEECCC---------------CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 45555555421 12467788889999998863 2467888888899999999876
No 177
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=3.6e-24 Score=210.44 Aligned_cols=301 Identities=16% Similarity=0.080 Sum_probs=199.4
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHhH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLAR 176 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~v~~~~sGseA~~~al~~ar 176 (474)
.+++||.+|. |++|.+.+.+.. ..+.. ||... .+|.+.++++++ ..++|+++||++|++....+
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~~~-----Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~--- 89 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAWRR-----LPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA--- 89 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHHHh-----CCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH---
Confidence 4689999997 888876333321 22222 35544 789999999886 24799999999999986544
Q ss_pred hhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcccc
Q 011959 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (474)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (474)
.+ ++++|++.+++|.++...+ ...|. +++.++.++ +.+ .+. -..+++++| +
T Consensus 90 ~~-~~g~v~v~~P~y~~y~~~~-~~~g~-------------------~~~~v~~~~-~~~----~~~--~~~v~l~nP-n 140 (339)
T PRK06959 90 LL-PRGRVGIAPLAYSEYAPAF-ARHGH-------------------RVVPLDEAA-DTL----PAA--LTHLIVVNP-N 140 (339)
T ss_pred hc-CCCeEEEcCCCcHHHHHHH-HHCCC-------------------EEEeecccc-hhc----ccc--CCEEEEeCC-C
Confidence 33 3456888889987754333 22232 123333322 222 111 124566666 5
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHH
Q 011959 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDI 331 (474)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i 331 (474)
|++|.+.+.++ +++|.+.|.++++++|+||+|..| ..... ....+ .++++ ||||.+| +|+|+||+++++++
T Consensus 141 NPTG~~~s~~~-l~~l~~~~~~~~~~vI~DEay~~~~~~~s~--~~~~~-~~~vi~l~SfSK~~gl~GlRiGy~v~~~~l 216 (339)
T PRK06959 141 NPTAERLPAAR-LLRWHAQLAARGGTLIVDEAFADTLPAASL--AAHTD-RPGLVVLRSVGKFFGLAGVRAGFVLAAPAL 216 (339)
T ss_pred CCCCCCCCHHH-HHHHHHHHHHcCCEEEEECCCccCCCcccc--hhccC-CCCEEEEecChhhcCCcchheEEEecCHHH
Confidence 78898887666 888888899999999999999887 32111 11111 23433 8999999 89999999999999
Q ss_pred HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEec
Q 011959 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (474)
Q Consensus 332 ~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (474)
++.+... ...++.|.+++.++.++|+.-.- +...+.++++++++.+.|+++ ++. +...++++++.+.+
T Consensus 217 i~~l~~~-----~~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~--~~~~~~f~~~~~~~ 285 (339)
T PRK06959 217 LAALRDA-----LGAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH----GFA--VHATPLFSWTDDPR 285 (339)
T ss_pred HHHHHHh-----cCCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CCC--ccCcceEEEEeCCC
Confidence 9988742 13566788899998888852111 334455555555566665553 322 12345566665421
Q ss_pred CCCcCcccccccchHHHHHHHHHHHHCCeEecccC-CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
..++.+.|.++||+++..+ .+++|+++..+++++++++++|+++++.
T Consensus 286 ----------------~~~l~~~l~~~GI~vr~~~~~~~lRisi~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 286 ----------------AAALHAALARRGIWTRYFAPPPSVRFGLPADEAEWQRLEDALAECVPT 333 (339)
T ss_pred ----------------HHHHHHHHHhCCeEEEECCCCCeEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 2578899999999998753 3467888877899999999999988764
No 178
>PRK03321 putative aminotransferase; Provisional
Probab=99.93 E-value=3.2e-24 Score=212.59 Aligned_cols=319 Identities=17% Similarity=0.167 Sum_probs=209.7
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhh
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 178 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~ 178 (474)
.+|||..+. ..+| .++.+.+++.+.+.....| +.....++.+.+++++. ..++|++++|.++++..+++. ..
T Consensus 23 ~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y--~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~--~~ 95 (352)
T PRK03321 23 GAIKLSSNE--TPFG-PLPSVRAAIARAAAGVNRY--PDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQA--TA 95 (352)
T ss_pred cceeccCCC--CCCC-CCHHHHHHHHHHHHhcCcC--CCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHH--hc
Confidence 378888774 3344 4678999998877653333 34445667777777765 567899999888888888773 23
Q ss_pred cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCC
Q 011959 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (474)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (474)
..++.|++..++|..+ .......|..+..++.....+ .|++.+++.++. ++++|+++.++|+
T Consensus 96 ~~gd~Vli~~p~y~~~-~~~~~~~g~~~~~v~~~~~~~--------------~~~~~l~~~~~~---~~~~v~l~~p~NP 157 (352)
T PRK03321 96 GPGDEVIFAWRSFEAY-PILVQVAGATPVQVPLTPDHT--------------HDLDAMAAAITD---RTRLIFVCNPNNP 157 (352)
T ss_pred CCCCEEEeCCCCHHHH-HHHHHHcCCEEEEccCCCCCC--------------CCHHHHHHhhcc---CCCEEEEeCCCCC
Confidence 4567788877777432 223333343322211110011 178899888863 4567777677788
Q ss_pred CCcccCCHHHHHHHHHHHHH--hCCEEEEeccccCc-ccCCC-ccccccCCCCcee---ehhhhcC-CCcceEEEEecHH
Q 011959 259 SGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRD 330 (474)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~--~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~ 330 (474)
+|.+.+ .+++.++|++ +++++|+||+|.+| ..+.. .....+...++++ +|||.++ +|+|+||++++++
T Consensus 158 tG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~ 233 (352)
T PRK03321 158 TGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPE 233 (352)
T ss_pred cCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHH
Confidence 999998 5666677666 69999999999888 54321 1122222334554 7999999 8999999999999
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEe
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (474)
+++.+.. . ..+++.+++++.++.++|+.... .+..+++.+..+.+.+.|++ .++. ..+..|+++++.+.
T Consensus 234 ~~~~~~~---~--~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~-~~~~~g~~i~i~l~ 303 (352)
T PRK03321 234 VIAALRK---V--AVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRA----AGWT-VPPSQANFVWLPLG 303 (352)
T ss_pred HHHHHHH---h--cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCc-cCCCCCCEEEEeCC
Confidence 9998873 1 24577889999988888853221 12222233333444444443 3332 12345778777763
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.. ...+.+.|.++||.+.+.+...+|+++ .+.+++++++++|++++.-
T Consensus 304 ~~---------------~~~~~~~l~~~gI~v~~~~~~~iRi~~-~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 304 ER---------------TADFAAAAAEAGVVVRPFAGEGVRVTI-GAPEENDAFLRAARAWRAG 351 (352)
T ss_pred CC---------------HHHHHHHHHHCCEEEEccCCCcEEEee-CCHHHHHHHHHHHHHHhcc
Confidence 11 257888899999999987655688875 5889999999999998754
No 179
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=6.8e-24 Score=210.59 Aligned_cols=319 Identities=14% Similarity=0.102 Sum_probs=207.4
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHh
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLA 175 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~-~~~v~~~~sGseA~~~al~~a 175 (474)
++.++|+..|. ++++ .+|.+++++.+.+......+|+.....+|.+.+++++. . .++|++++|+++++..+++.
T Consensus 25 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~- 100 (356)
T PRK04870 25 ATGMVKLDAME--NPYR-LPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALA- 100 (356)
T ss_pred CCCceeCcCCC--CCCC-CCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHH-
Confidence 46788887773 4444 68899999999886532223333334667777777765 2 24899999999999998884
Q ss_pred HhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011959 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
....++.|++.+++|.++. ......|..+..++.....+ -|++++++.++.+ ++++|++..+
T Consensus 101 -~~~~gd~vlv~~P~y~~~~-~~~~~~g~~~~~i~~~~~~~--------------~d~~~l~~~~~~~--~~~~v~l~~p 162 (356)
T PRK04870 101 -CAKPGATVLAPEPGFVMYR-MSAKLAGLEFVGVPLTADFT--------------LDLPAMLAAIAEH--RPALVFLAYP 162 (356)
T ss_pred -hcCCCCEEEECCCCHHHHH-HHHHHcCCEEEEecCCCCCC--------------CCHHHHHHHhhcC--CCCEEEEcCC
Confidence 2345678898898887643 33344454333222111011 1789999988643 5667777666
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCce---eehhhhcC-CCcceEEEEecHHH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL---TTLGKIIG-GGLPVGAYGGRRDI 331 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi---~t~sK~l~-~G~~iG~~~~~~~i 331 (474)
+|++|.+.+.++ +++|.++| ++++|+||+|..|...... ....-.+++ .+||| ++ +|+|+||+++++++
T Consensus 163 ~NPtG~~~~~~~-~~~i~~~~---~~~ii~De~y~~~~~~~~~--~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~ 235 (356)
T PRK04870 163 NNPTGNLFDDAD-VERIIEAA---PGLVVVDEAYQPFAGDSWL--PRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAW 235 (356)
T ss_pred CCCCCCCCCHHH-HHHHHHHC---CCEEEEECCchhhcCcchH--HHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHH
Confidence 788999988554 66666666 7899999999877211111 111111233 37999 77 79999999999999
Q ss_pred HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEec
Q 011959 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (474)
Q Consensus 332 ~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (474)
++.+.... ..++.+.+++.++..+++..+. ++..++++++.+.+.+.|+++ .++ ...+..|.++++.+.+
T Consensus 236 i~~~~~~~-----~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~-~~~~~~~~~~~~~~~~ 306 (356)
T PRK04870 236 IAELDKVR-----PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAAL---PGV-TVFPSAANFILVRVPD 306 (356)
T ss_pred HHHHHHcc-----CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---CCc-EECCCCCeEEEEECCC
Confidence 98886321 2356677888887777753211 334455555556666555542 122 2234567777776531
Q ss_pred CCCcCcccccccchHHHHHHHHHHHHCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
...+.+.|.++||.+.++. .+++|+++. +.+++++++++|++++
T Consensus 307 ----------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 307 ----------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG-TPEENAQFLAALKAAL 356 (356)
T ss_pred ----------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHhC
Confidence 1467788899999998752 235677766 6899999999998763
No 180
>PLN02672 methionine S-methyltransferase
Probab=99.93 E-value=2.6e-23 Score=223.79 Aligned_cols=351 Identities=11% Similarity=0.062 Sum_probs=216.8
Q ss_pred EEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CC---CeEEEeCCHHHH
Q 011959 92 HMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SI---EMVRFVNSGTEA 167 (474)
Q Consensus 92 ~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~---~~v~~~~sGseA 167 (474)
++.+.+|..+|++..|- +.++ .+|.+++++.+.+.+...+.+..+++.+++++++++++ .. ++|++++|.+++
T Consensus 690 ~~~~~~g~~vI~LsinE--~d~p-pPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el 766 (1082)
T PLN02672 690 SVSGSQESSLIHMDVDE--SFLP-VPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL 766 (1082)
T ss_pred CCcccCCCCEEEEeCCC--CCCC-CCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence 34556788899998884 3444 78999999998876643322345678999999999875 22 489999988888
Q ss_pred HHHHHHHhHhhc-CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCC
Q 011959 168 CMGVLRLARAFT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGE 246 (474)
Q Consensus 168 ~~~al~~ar~~~-~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 246 (474)
+..+++ ++. +++.|++.+|+|..+. ......|..+..++.....++. -|++.|++.++.. ..
T Consensus 767 L~lll~---aLl~pGD~VLVp~PtY~~Y~-~~a~~~Ga~vv~Vpl~~e~gf~------------lD~d~Le~al~~~-~~ 829 (1082)
T PLN02672 767 FNKLVL---CCVQEGGTLCFPAGSNGTYV-SAAKFLKANFRRIPTKSSDGFK------------LTAKTLASTLETV-KK 829 (1082)
T ss_pred HHHHHH---HHcCCCCEEEEeCCChHHHH-HHHHHcCCEEEEEecccccCCC------------CCHHHHHHHhccC-CC
Confidence 888887 444 4578888888887744 4444445544332221111210 1788999988642 12
Q ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc---cc-c---cc-CCCC--cee---eh
Q 011959 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG---AQ-E---YF-GVTP--DLT---TL 312 (474)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~---~~-~---~~-g~~p--di~---t~ 312 (474)
..+++++|++|++|.+.+.++ +++|.++|++||++||+||+|.++ ..+... .. + .+ ...+ .++ +|
T Consensus 830 ~~I~L~nPnhNPTG~v~S~ee-Le~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~Sf 908 (1082)
T PLN02672 830 PWVYISGPTINPTGLLYSNSE-IEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGL 908 (1082)
T ss_pred CEEEEECcCCCCcCccCCHHH-HHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCc
Confidence 456777787688998887666 999999999999999999999988 544221 00 0 11 1112 232 79
Q ss_pred hhhcC-CCcceEEEEecH-HHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHH
Q 011959 313 GKIIG-GGLPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG-------TYEYLNKITGELTQG 383 (474)
Q Consensus 313 sK~l~-~G~~iG~~~~~~-~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~-------~~~~~~~~~~~l~~~ 383 (474)
||.++ +|||+||+++++ ++++.+..... ....+..+.+++.+++++++. +..+ ..+.++++.+++.+.
T Consensus 909 SKkf~lpGLRIGylIap~~eLi~~l~~~~~--~s~~~~~~q~Aaaaalall~~-~~~~~~~~l~e~r~~Lk~rRd~L~e~ 985 (1082)
T PLN02672 909 STELLSGGHEFGFLALNDSVLIDAFHSAPG--LSRPHSTLKYTIKKLLGLKNQ-KSSDLLDGVAEQKKILKSRAERLKET 985 (1082)
T ss_pred HHhhccHHHHheeEEeCCHHHHHHHHHhhh--hcCCCcHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 799999999864 58888763110 111112223333333333310 1122 233344555555555
Q ss_pred HHHHhhhcCCeeEEeee-ceeEEEEEecCCCcCcccccccc-----hHHHHHHHHHHHHC-CeEecccCC----cceEEe
Q 011959 384 IIDAGKKAGHAICGGYI-SGMFGFFFTEGPVYNFEDAKKSE-----TTKFARFYRGMLEE-GVYFAPSQF----EAGFTS 452 (474)
Q Consensus 384 L~~~~~~~~~~~~v~~~-g~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~-Gv~v~~~~~----~~~~~~ 452 (474)
|++ +++. ..++. |.++|+.+..-.... .....++ .....++++.|+++ ||.+.|+.. +++|++
T Consensus 986 L~~----~Gi~-v~~PeGGFfLwl~l~~~l~~~-~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIs 1059 (1082)
T PLN02672 986 LEA----CGWD-VLEPQGGISMVAKPSAYLGKT-VKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFS 1059 (1082)
T ss_pred HHH----CCCe-EecCCcEEEEEEEcccccccc-ccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEE
Confidence 544 4443 33444 445555432100000 0000000 01235788888865 999998732 467899
Q ss_pred cCCcHHHHHHHHHHHHHHHh
Q 011959 453 LAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 453 ~~~t~e~i~~~l~~l~~~~~ 472 (474)
++.+++++++++++|+++.+
T Consensus 1060 fa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1060 FALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred ecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999998754
No 181
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.93 E-value=6.4e-24 Score=208.27 Aligned_cols=301 Identities=18% Similarity=0.169 Sum_probs=198.1
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHh
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~ 177 (474)
.+.+||..|+ +.++. | ..+.. ......| ++....+|.++++++++ ..+++++++|+++++..+.+ .
T Consensus 17 ~~~~~~~~~~--~~~~~--~-~~~~~---~~~~~~y--~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~---~ 83 (330)
T TIGR01140 17 EDWLDFSTGI--NPLGP--P-VPPIP---ASAWARY--PDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPR---L 83 (330)
T ss_pred hheeEccccC--CCCCC--C-hhhcc---hHHHhhC--CCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHH---H
Confidence 3568888886 55543 2 22221 1111223 32224778888888776 46899999999999988665 3
Q ss_pred hcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccC
Q 011959 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (474)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (474)
+.++ +|++.+++|+.+... +...|. ++..++ |++.+++.++ ++++|+++.++|
T Consensus 84 l~~g-~vl~~~p~y~~~~~~-~~~~g~-------------------~~~~~~--d~~~l~~~~~----~~~~v~i~~p~N 136 (330)
T TIGR01140 84 LAPG-RVLVLAPTYSEYARA-WRAAGH-------------------EVVELP--DLDRLPAALE----ELDVLVLCNPNN 136 (330)
T ss_pred hCCC-eEEEeCCCcHHHHHH-HHHcCC-------------------EEEEeC--CHHHHHhhcc----cCCEEEEeCCCC
Confidence 4444 788889998875332 222222 234444 8899988874 234555555567
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHHH
Q 011959 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIM 332 (474)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i~ 332 (474)
++|.+.+.++ +++|.++|++||+++|+||+|.+| ..... ....+..++++ +|||.+| +|+|+||++++++++
T Consensus 137 PtG~~~~~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~ 213 (330)
T TIGR01140 137 PTGRLIPPET-LLALAARLRARGGWLVVDEAFIDFTPDASL--APQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALL 213 (330)
T ss_pred CCCCCCCHHH-HHHHHHHhHhcCCEEEEECcccccCCccch--hhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHH
Confidence 8888876555 999999999999999999999887 32111 11112123333 8999999 899999999999999
Q ss_pred HhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCC
Q 011959 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (474)
Q Consensus 333 ~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (474)
+.+... ...++.++++++++.+.++ +.++.++.+++.+..++.+.+.+.+++.....++.|.|+|+.+..
T Consensus 214 ~~l~~~-----~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~~-- 283 (330)
T TIGR01140 214 ARLREA-----LGPWTVNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTPD-- 283 (330)
T ss_pred HHHHhc-----CCCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcCC--
Confidence 988742 2245677888888777775 334444455555555555555555555333345567777776531
Q ss_pred CcCcccccccchHHHHHHHHHHHHCCeEecccCC------cceEEecCCcHHHHHHHHHHH
Q 011959 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAA 467 (474)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------~~~~~~~~~t~e~i~~~l~~l 467 (474)
..++++.|+++||++.|+.. +++|+++....++ ++++++|
T Consensus 284 --------------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 284 --------------AAALHEALARRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred --------------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 15788999999999998632 3578887766666 8877766
No 182
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.93 E-value=5.6e-23 Score=207.17 Aligned_cols=332 Identities=16% Similarity=0.161 Sum_probs=209.3
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhC-C-CCCeEEEeCCHHHHHHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAV-P-SIEMVRFVNSGTEACMGVLR 173 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~la~~l~~~~-~-~~~~v~~~~sGseA~~~al~ 173 (474)
..++||..|. ..++ .++.+.+++.+.......|+ +..+++.++++++...- + +.++|++++|+++|+..+++
T Consensus 30 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~ 106 (397)
T PRK07568 30 IKVYHLNIGQ--PDIK-TPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMM 106 (397)
T ss_pred CCEEEecCCC--CCCC-CCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHH
Confidence 3466776663 2222 36888888877654333332 23456667777665321 1 46799999999999999988
Q ss_pred HhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEc
Q 011959 174 LARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE 253 (474)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~e 253 (474)
.. ...++.|++.+++|.... ......|..+..++.....++ ...+++.+++.++. ++++|++.
T Consensus 107 ~l--~~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~v~~~~~~g~-----------~~~~~~~l~~~~~~---~~~~v~i~ 169 (397)
T PRK07568 107 AI--CDPGDEILVPEPFYANYN-GFATSAGVKIVPVTTKIEEGF-----------HLPSKEEIEKLITP---KTKAILIS 169 (397)
T ss_pred Hh--cCCCCEEEEecCCCccHH-HHHHHcCCEEEEeecCcccCC-----------CCCCHHHHHHhcCc---cceEEEEE
Confidence 42 345678888888876543 333344443322211101111 01257888888753 45667665
Q ss_pred cccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC--ccccccCCCCcee---ehhhhcC-CCcceEEEE
Q 011959 254 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYFGVTPDLT---TLGKIIG-GGLPVGAYG 326 (474)
Q Consensus 254 p~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~--~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~ 326 (474)
.++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+.. ......+..++++ +|||.++ +|+|+||++
T Consensus 170 ~p~NPtG~~~~~~~-~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~ 248 (397)
T PRK07568 170 NPGNPTGVVYTKEE-LEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI 248 (397)
T ss_pred CCCCCCCccCCHHH-HHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEe
Confidence 55678898877666 999999999999999999999988 55432 1112222233443 7999999 699999998
Q ss_pred ec-HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEe-eece
Q 011959 327 GR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISG 402 (474)
Q Consensus 327 ~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~ 402 (474)
++ +++++.+.. ... .+++.+.+.+.++.++|+..++ +.+.+.++++.+.+.+.|++ ++...... ..|.
T Consensus 249 ~~~~~~~~~~~~---~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g~~ 320 (397)
T PRK07568 249 SKNKELIAAAMK---LCQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNK----IPGVVCEKPKGAF 320 (397)
T ss_pred cCCHHHHHHHHH---Hhh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecCCCcce
Confidence 74 678876642 111 2457788888888887753211 22344445555555555543 32222233 3445
Q ss_pred eEEEEEecCCCcCcccccccchHHHHHHHHHHHH------CCeEecccC---------CcceEEecCCcHHHHHHHHHHH
Q 011959 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE------EGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAA 467 (474)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~Gv~v~~~~---------~~~~~~~~~~t~e~i~~~l~~l 467 (474)
++++.+... ...++.+.|++ +||.+.|+. .+++|+++..+++++++++++|
T Consensus 321 ~~~~~l~~~--------------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l 386 (397)
T PRK07568 321 YIIAKLPVD--------------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEIL 386 (397)
T ss_pred EEEEecCCC--------------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHH
Confidence 567666321 12456666664 599998852 1367888888899999999999
Q ss_pred HHHHhh
Q 011959 468 EKVLRQ 473 (474)
Q Consensus 468 ~~~~~~ 473 (474)
.+++++
T Consensus 387 ~~~l~~ 392 (397)
T PRK07568 387 KEALEK 392 (397)
T ss_pred HHHHHH
Confidence 998865
No 183
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.93 E-value=6.9e-24 Score=214.24 Aligned_cols=337 Identities=16% Similarity=0.131 Sum_probs=203.7
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc------CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG------TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGT 165 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~------~~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGs 165 (474)
|..++|+..|. ..++ .+|.+.+++.+.+.+. ..|+ +..+++..+++++.+..+ .+++|++|+|+.
T Consensus 33 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGD--VTQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcC--CCCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 55677887773 2333 5788999999887652 1232 234567777777655443 578999999999
Q ss_pred HHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCC-CccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC
Q 011959 166 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (474)
Q Consensus 166 eA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (474)
+++...+. .+.+++.|++.+|+|.++...+. ..|.. +.. + .+. ..+++.++.+.-+.++.-+.+
T Consensus 110 ~al~~l~~---~~~~gd~V~v~~P~Y~~~~~~~~-~~g~~~~~~---~--~~~----~~~~~~v~~~~~~~~~~d~~~-- 174 (409)
T PRK07590 110 CDTGNILD---IFGPDNTIAVTDPVYPVYVDTNV-MAGRTGEAN---E--DGR----YSGIVYLPCTAENNFVPELPE-- 174 (409)
T ss_pred HHHHHHHH---hcCCCCEEEEeCCCCcchHHHHH-HcCCccccc---c--ccc----ccceeEeecccccCCcccCcc--
Confidence 99987544 45567889999999988654333 33321 100 0 000 001222222100001000111
Q ss_pred CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC-cccccc-CCCCc---eeehhhhcC-
Q 011959 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-GVTPD---LTTLGKIIG- 317 (474)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~-g~~pd---i~t~sK~l~- 317 (474)
.++++|++..++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+.. -....+ +.... +-||||.++
T Consensus 175 ~~~k~i~l~nP~NPTG~~~s~~~-~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 253 (409)
T PRK07590 175 EKVDIIYLCFPNNPTGTVLTKEQ-LKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGF 253 (409)
T ss_pred cCceEEEEeCCCCCcCCcCCHHH-HHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCC
Confidence 25666766666788999887666 999999999999999999999888 44321 111111 11112 237999998
Q ss_pred CCcceEEEEecHHHHHhhcCCC--------CcccccCC-CCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHH
Q 011959 318 GGLPVGAYGGRRDIMEMVAPAG--------PMYQAGTL-SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGII 385 (474)
Q Consensus 318 ~G~~iG~~~~~~~i~~~~~~~~--------~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~ 385 (474)
+|+|+||+++++++++.+.... ......++ +.+.+++.++.++++.-.. +.+.+.++++.+.+.+.|+
T Consensus 254 pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~ 333 (409)
T PRK07590 254 TGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLE 333 (409)
T ss_pred cCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999887331000 00111222 4677888888777642100 2233444445555555554
Q ss_pred HHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHH
Q 011959 386 DAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSD 458 (474)
Q Consensus 386 ~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e 458 (474)
+ +++....+..|+++|+.+... ....++++.++ ++||++.|+. .+++|+++..+++
T Consensus 334 ~----~~~~~~~~~g~~f~wi~~~~~-------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~ 396 (409)
T PRK07590 334 S----AGFEVYGGVNAPYIWVKTPDG-------------MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRE 396 (409)
T ss_pred h----cCCceecCCcceEEEEECCCC-------------CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHH
Confidence 4 343222223567888877431 01245677776 5699998863 2357888777999
Q ss_pred HHHHHHHHHHHH
Q 011959 459 DIQHTITAAEKV 470 (474)
Q Consensus 459 ~i~~~l~~l~~~ 470 (474)
++++++++|.++
T Consensus 397 ~l~~~l~rl~~~ 408 (409)
T PRK07590 397 NVLEAMERIKKA 408 (409)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 184
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=5.3e-24 Score=209.03 Aligned_cols=319 Identities=11% Similarity=0.092 Sum_probs=204.0
Q ss_pred eeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC----CCCeEEEeC
Q 011959 87 SVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP----SIEMVRFVN 162 (474)
Q Consensus 87 ~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~~v~~~~ 162 (474)
+++|.+-+...|+..||+..|- +.++ .+|.+++++.+.+.......|+.....+|.+.+++++. +.++|++|+
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~--~~~~-~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~ 83 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNE--NPFP-FPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGN 83 (335)
T ss_pred hhccCcCCCCCCCceeEecCCC--CCCC-CCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcC
Confidence 4566666667888999998874 4555 68899999988775422111222234455555555543 478999999
Q ss_pred CHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc
Q 011959 163 SGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (474)
Q Consensus 163 sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (474)
|+++++..+++. + +.|++.+++|.++... ....|..+..+ |..... .++.. .+.
T Consensus 84 Ga~~~i~~~~~~---~---d~v~v~~P~y~~~~~~-~~~~g~~~~~v--~~~~~~--------------~~~~~--~~~- 137 (335)
T PRK14808 84 GADEIIYVMMLM---F---DRSVFFPPTYSCYRIF-AKAVGAKFLEV--PLTKDL--------------RIPEV--NVG- 137 (335)
T ss_pred CHHHHHHHHHHH---h---CcEEECCCCHHHHHHH-HHHcCCeEEEe--cCCCcC--------------CCChh--Hcc-
Confidence 999999999983 4 5688889998875433 33334333221 111110 01111 122
Q ss_pred CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCce---eehhhhcC-C
Q 011959 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL---TTLGKIIG-G 318 (474)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi---~t~sK~l~-~ 318 (474)
..+++++..++|++|.+.+ .+++.+|+ +++++||+||+|..|...... ......+++ .+|||+++ +
T Consensus 138 ---~~~~i~i~nP~NPTG~~~s----~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~--~~~~~~~~vi~~~S~SK~~~l~ 207 (335)
T PRK14808 138 ---EGDVVFIPNPNNPTGHVFE----REEIERIL-KTGAFVALDEAYYEFHGESYV--DLLKKYENLAVIRTFSKAFSLA 207 (335)
T ss_pred ---CCCEEEEeCCCCCCCCCcC----HHHHHHHH-hcCCEEEEECchhhhcCCchH--HHHHhCCCEEEEEechhhccCc
Confidence 3466777777788999988 44455556 589999999999877211111 111112233 37999999 8
Q ss_pred CcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEE
Q 011959 319 GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (474)
Q Consensus 319 G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (474)
|+|+||+++++++++.+.... .+++.+.+++.++.++++..+. .+..+.+.++.+++.+.|++ .++. ..
T Consensus 208 GlRvG~~v~~~~~~~~l~~~~-----~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~-~~ 277 (335)
T PRK14808 208 AQRIGYVVSSEKFIDAYNRVR-----LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALRE----MGYR-IT 277 (335)
T ss_pred ccceEEEEeCHHHHHHHHHhc-----CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCE-EC
Confidence 999999999999999886321 2466788888888888763211 22233444444445544443 3432 23
Q ss_pred eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHH
Q 011959 398 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 398 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
++.|.|+++.+... ....+.+.|.++||++.... ..+|+++ .+.++.+++++.|+++
T Consensus 278 ~~~g~f~~~~l~~~--------------~~~~~~~~l~~~Gi~V~~~~-~~~Risi-~~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 278 DSRGNFVFIFMEKE--------------EKERLLEHLRAKNIAVRSFR-EGVRITI-GKREENDMILKELEVF 334 (335)
T ss_pred CCCCeEEEEeCCCc--------------cHHHHHHHHHHCCeEEEECC-CCeEEec-CCHHHHHHHHHHHHhh
Confidence 56788888876421 12568889999999998653 5678874 4578999999998753
No 185
>PRK07337 aminotransferase; Validated
Probab=99.93 E-value=3.4e-23 Score=207.96 Aligned_cols=333 Identities=12% Similarity=0.101 Sum_probs=213.6
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVL 172 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al 172 (474)
.++||..+. ..++ .+|.+.+++.+.+... ..|+ +..+++..+++++.+.++ ..+++++|+|+++|+..++
T Consensus 31 ~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~ 107 (388)
T PRK07337 31 DIIHMGIGE--PDFT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLAC 107 (388)
T ss_pred CEEEeCCcC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHH
Confidence 456776663 1222 4788999998887643 2332 234677888888876543 4678999999999999888
Q ss_pred HHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEE
Q 011959 173 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 252 (474)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ 252 (474)
.. ....++.|++.+++|.+....+ ...|..+..++.....+ +. -|++++++.+.. ++++|++
T Consensus 108 ~~--l~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~---------~~---~~~~~l~~~~~~---~~~~v~l 169 (388)
T PRK07337 108 LA--LVERGDEVLMPDPSYPCNRHFV-AAAEGRPVLVPSGPAER---------FQ---LTAADVEAAWGE---RTRGVLL 169 (388)
T ss_pred HH--hcCCCCEEEEeCCCchhhHHHH-HHcCCEEEEeecCCccC---------Cc---CCHHHHHhhcCc---cceEEEE
Confidence 84 2345678999899988754333 33333222211110000 00 168888887753 4566666
Q ss_pred ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEe
Q 011959 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGG 327 (474)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~ 327 (474)
..++|++|.+.+.++ +++|.++|++||+++|+||+|.+| ..+... ......++++ +|||.++ +|+|+||+++
T Consensus 170 ~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~--~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~ 246 (388)
T PRK07337 170 ASPSNPTGTSIAPDE-LRRIVEAVRARGGFTIVDEIYQGLSYDAAPV--SALSLGDDVITINSFSKYFNMTGWRLGWLVV 246 (388)
T ss_pred ECCCCCCCcCcCHHH-HHHHHHHHHHCCCEEEEeccccccccCCCCc--ChhhccCCEEEEEechhhcCCchhheeeeec
Confidence 556778898887666 999999999999999999999877 433211 1122334543 7999997 8999999999
Q ss_pred cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhc--C-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeE-Eeeecee
Q 011959 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--E-PGTYEYLNKITGELTQGIIDAGKKAGHAIC-GGYISGM 403 (474)
Q Consensus 328 ~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~--~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-v~~~g~~ 403 (474)
++++++.+.. .......+.+.+++.++.++++.-. . ....+.++++.+++.+.|++ .++... .+..|++
T Consensus 247 ~~~l~~~l~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~~~p~~g~f 319 (388)
T PRK07337 247 PEALVGTFEK---LAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES----LGFKVPVMPDGAFY 319 (388)
T ss_pred CHHHHHHHHH---HHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCeeEE
Confidence 9999888763 2222234567888888777764210 0 12233444445555555544 333222 3456788
Q ss_pred EEEEEecCCCcCcccccccchHHHHHHHHHH-HHCCeEecccC-------CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 404 FGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~-------~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
+|+.+.... .++.....++++.+ .++||.+.|+. .+++|+++..+++++++++++|.+++
T Consensus 320 ~~~~~~~~~--------~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 320 VYADCRGVA--------HPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred EEEeccccc--------CCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 888875310 00111124666664 47899998752 24678888888999999999998875
No 186
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-23 Score=208.84 Aligned_cols=321 Identities=15% Similarity=0.147 Sum_probs=205.3
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 176 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar 176 (474)
+..+|||..|. ++++ .++.+.+++.+.......|+.+.. .+|.+.++++++ ..++|++++|+++++..+++.
T Consensus 35 ~~~~i~l~~~~--~~~~-~~~~~~~al~~~~~~~~~Y~~~~g--~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~-- 107 (371)
T PRK05166 35 VPRIAKLGSNE--NPLG-PSPAVRRAFADIAELLRLYPDPQG--RALREAIAARTGVPADRIILGNGSEDLIAVICRA-- 107 (371)
T ss_pred CcceEEcCCCC--CCCC-CCHHHHHHHHHHHHHhhcCCCCcH--HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHH--
Confidence 44689998875 4565 678899998876544333432222 367777777775 567999999999999988874
Q ss_pred hhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcccc
Q 011959 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (474)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (474)
....++.|++.+++|.... ......|..+..++.....++ |++++++.++. ++++|++..++
T Consensus 108 ~~~~gd~vli~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~~--------------~~~~l~~~~~~---~~~~v~l~~p~ 169 (371)
T PRK05166 108 VLRPGDRVVTLYPSFPLHE-DYPTMMGARVERVTVTPDLGF--------------DLDALCAAVAR---APRMLMFSNPS 169 (371)
T ss_pred hcCCCCEEEEcCCChHHHH-HHHHHcCCeEEEeecCCCCCC--------------CHHHHHHhhhc---CCCEEEEeCCC
Confidence 2345677888888887643 233333433322111100111 78999888864 34566666667
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC-Ccccccc-CCCCcee---ehhhhcC-CCcceEEEEe-c
Q 011959 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYF-GVTPDLT---TLGKIIG-GGLPVGAYGG-R 328 (474)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~-g~~pdi~---t~sK~l~-~G~~iG~~~~-~ 328 (474)
|++|.+.+.++ +++|.++|++ +++||+||+|..| ..+. ......+ ...++++ ||||.++ +|+|+||+++ +
T Consensus 170 NPtG~~~~~~~-~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~ 247 (371)
T PRK05166 170 NPVGSWLTADQ-LARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD 247 (371)
T ss_pred CCCCCCCCHHH-HHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC
Confidence 88999887555 7777777764 8899999999877 3221 1111111 1222333 7999999 9999999764 7
Q ss_pred HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEE
Q 011959 329 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (474)
Q Consensus 329 ~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (474)
+++++.+... ...++.|.+++.++.++|..-.. ++.++.++++.+++.+.|++ +++. ..++.|.++++.
T Consensus 248 ~~l~~~~~~~-----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~-~~p~~g~fl~~~ 317 (371)
T PRK05166 248 PELVGLLDRV-----RTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAE----MGYR-IAPSRANFLFFD 317 (371)
T ss_pred HHHHHHHHHh-----ccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CcCe-eCCCcCCEEEEe
Confidence 8888877631 12456788888888877752110 22333444444555555544 3432 245567887776
Q ss_pred EecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
+..+ ..++.+.|+++||.+.|+. .+++|+++. +.++.+++++.|++++
T Consensus 318 ~~~~---------------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~-~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 318 ARRP---------------ASAVAEALLRQGVIVKPWKQPGFETFIRVSIG-SPEENDHFVAALDKVL 369 (371)
T ss_pred CCCC---------------HHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHh
Confidence 4211 2568889999999998863 235677766 4666788888887664
No 187
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.93 E-value=2.6e-23 Score=212.39 Aligned_cols=305 Identities=15% Similarity=0.130 Sum_probs=191.3
Q ss_pred CCHHHHHHHHHHHhhCC-----CCCeEEEeCCHHHHHHHHHHHhHhh-cCCcEEEEEeCCCCCCchhHHHhcCCCCccCC
Q 011959 137 PCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAF-TGRERIIKFEGCYHGHADPFLVKAGSGVATLG 210 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~-----~~~~v~~~~sGseA~~~al~~ar~~-~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~ 210 (474)
..+++.++++++.+.++ ..++|++|+|+++++..++. .+ ..++.|++.+|+|.+....+....|..+..++
T Consensus 88 ~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~---~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~ 164 (468)
T PLN02450 88 LPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMF---CLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIH 164 (468)
T ss_pred hHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHH---HhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEe
Confidence 45778888888876532 46789999999999999988 44 44677888888887754433323343332221
Q ss_pred CCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC---CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 011959 211 LPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287 (474)
Q Consensus 211 ~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DE 287 (474)
.....++ . -|++.+++.+++. +.++++|++..++|++|.+.+.++ +++|.++|++||++||+||
T Consensus 165 ~~~~~~~-----------~-~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~-l~~ll~~a~~~~~~iI~DE 231 (468)
T PLN02450 165 CSSSNGF-----------Q-ITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTE-LNLLVDFITAKNIHLISDE 231 (468)
T ss_pred cCCccCC-----------c-CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHH-HHHHHHHHHHCCcEEEEEc
Confidence 1101111 0 1678888877641 235676666666778898877665 9999999999999999999
Q ss_pred cccCc-ccCCCcc--cccc------C--CCCce---eehhhhcC-CCcceEEEEecHH-HHHhhcCCCCcccccCCCCCh
Q 011959 288 VMTGF-RLAYGGA--QEYF------G--VTPDL---TTLGKIIG-GGLPVGAYGGRRD-IMEMVAPAGPMYQAGTLSGNP 351 (474)
Q Consensus 288 v~~g~-r~g~~~~--~~~~------g--~~pdi---~t~sK~l~-~G~~iG~~~~~~~-i~~~~~~~~~~~~~~t~~~~~ 351 (474)
+|.++ ..+..+. .+.. + ....+ -+|||.++ +|+|+||++++++ +++.+.. ... ....+.
T Consensus 232 ~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~---~~~--~~~~s~ 306 (468)
T PLN02450 232 IYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATK---MSS--FGLVSS 306 (468)
T ss_pred cccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHH---Hhh--cCCCCH
Confidence 99877 4442221 1111 1 11223 37999998 8999999999754 5665542 111 123577
Q ss_pred HHHHHHHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHH
Q 011959 352 LAMTAGIHTLKRLKE-----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 426 (474)
Q Consensus 352 ~~~aaa~aal~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 426 (474)
+++.++.+.|+.-.- .+.+++++++.+.+.+.|+ ++++....+..|+++|+.+...- . ......
T Consensus 307 ~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~----~~gi~~~~~~~g~flwi~l~~~~-~------~~~~~~ 375 (468)
T PLN02450 307 QTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLE----AAGIKCLKSNAGLFCWVDMRHLL-K------SNTFEA 375 (468)
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH----HcCCcccCCCceEEEEEEchHhc-C------cCCchH
Confidence 888887777742110 1122333333344444443 44543333445668888774210 0 001112
Q ss_pred HHHHHHHHH-HCCeEecccC------CcceEEecC-CcHHHHHHHHHHHHHHHhh
Q 011959 427 FARFYRGML-EEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 427 ~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~-~t~e~i~~~l~~l~~~~~~ 473 (474)
..++.+.++ ++||.+.|+. .+++|++++ .+++++++++++|++++++
T Consensus 376 ~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 376 EMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVES 430 (468)
T ss_pred HHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 234566665 5799999873 246889888 4899999999999998864
No 188
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=4.3e-23 Score=205.05 Aligned_cols=319 Identities=15% Similarity=0.117 Sum_probs=198.9
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHh
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~ 177 (474)
..++||..+. ++++ .++.+.+++.+.+.....|+.+ ...+|.+.++++++ +.++|++++|+++++..+++ .
T Consensus 22 ~~~i~l~~~~--n~~~-~~~~~~~a~~~~~~~~~~Y~~~--~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~---~ 93 (360)
T PRK07392 22 DAILDFSASI--NPLG-PPESVIAAIQSALSALRHYPDP--DYRELRLALAQHHQLPPEWILPGNGAAELLTWAGR---E 93 (360)
T ss_pred ccEEEeCCcC--CCCC-CCHHHHHHHHHHHHHhhcCCCc--CHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHH---H
Confidence 3678888664 5555 6789999998877654334322 23466677776665 67899999999999999888 4
Q ss_pred hcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccC
Q 011959 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (474)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (474)
+.+++.|++.+++|.++.. .+...|..+..++.....+.. ....+++.+++.. . ..+++++..++|
T Consensus 94 l~~g~~vlv~~P~y~~~~~-~~~~~g~~~~~v~~~~~~~~~---------~~~~~~~~~~~~~---~-~~~~~~l~nP~N 159 (360)
T PRK07392 94 LAQLRAVYLITPAFGDYRR-ALRAFGATVKELPLPLDQPSP---------GLTLRLQTLPPQL---T-PNDGLLLNNPHN 159 (360)
T ss_pred hCCCCeEEEECCCcHHHHH-HHHHcCCeEEEEecccccCCc---------ccccCHHHHHHhc---c-CCCEEEEeCCCC
Confidence 4456789999999987543 333445433322211111100 0001455544332 2 345666666688
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc-ccccCCCCcee---ehhhhcC-CCcceEEEEecHHH
Q 011959 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDI 331 (474)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i 331 (474)
++|.+.+ .++|.++++++++ +|+||+|.+| ..+.... ....+..+.++ +|||.++ +|+|+||+++++++
T Consensus 160 PTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~ 234 (360)
T PRK07392 160 PTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDR 234 (360)
T ss_pred CCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHH
Confidence 8999998 5678888999985 6669999988 5442111 11122223333 7999999 99999999999999
Q ss_pred HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH----HHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEE
Q 011959 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE----YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (474)
Q Consensus 332 ~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~----~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (474)
++.+... . ..++.+.+++.++.++|+. ..+.+ .++++.+++.+.|+ +++.....++.|.++++.
T Consensus 235 ~~~~~~~---~--~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~~~~~fl~~~ 302 (360)
T PRK07392 235 LQRWQQW---R--DPWPVNGLAAAAAIAALAD---RDFQQQTWAWLPPAREALFQGLA----SLPGLTPLPSAANFLLVQ 302 (360)
T ss_pred HHHHHhh---C--CCCCCCHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHH----hCCCcEECCCCCCEEEEE
Confidence 8887631 1 2467788999998888752 23333 34444444444443 332222234567777766
Q ss_pred EecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 408 FTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
+.. ...++.+.++ ++||.+.|+. .+++|+++... ++.+++.+.|+++++
T Consensus 303 ~~~---------------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~-~~~~~l~~al~~~~~ 358 (360)
T PRK07392 303 SQG---------------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTE-AENQRLLEALAAILA 358 (360)
T ss_pred cCC---------------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHhh
Confidence 531 1246777654 6799998873 13567776653 444566666665543
No 189
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.93 E-value=8.7e-24 Score=213.07 Aligned_cols=334 Identities=13% Similarity=0.102 Sum_probs=205.5
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHH----Hhc--CCCC---CCCHHHHHHHHHHHhhCC---CCCeEE--EeCCH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETM----KKG--TSFG---APCLLENVLAEMVISAVP---SIEMVR--FVNSG 164 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~----~~~--~~~~---~~~~~~~~la~~l~~~~~---~~~~v~--~~~sG 164 (474)
...+|+..|.....- .++.+.+++.+++ ... ..|+ +..++++++++++.+... ..++|+ .+++|
T Consensus 29 ~~~i~l~~g~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~ 106 (404)
T PTZ00376 29 PSKVNLGIGAYRDEN--GKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSG 106 (404)
T ss_pred cccEecccceeECCC--CCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCc
Confidence 456788777321111 2223344444443 211 2232 235677777777755432 456888 48899
Q ss_pred HHHHHHHHHHhHhhc-CCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-C-CCCCCCCCCCCceEEccCCCHHHHHHHHh
Q 011959 165 TEACMGVLRLARAFT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-P-DSPGVPKGATYETLTAPFNDVSALENLFE 241 (474)
Q Consensus 165 seA~~~al~~ar~~~-~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~d~~~le~~l~ 241 (474)
++|+..++.+.+.+. .++.|++.+++|+++.. .+...|..+..++. + ...++ |++.+++.++
T Consensus 107 ~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~-~~~~~G~~~~~v~l~~~~~~~~--------------d~~~l~~~~~ 171 (404)
T PTZ00376 107 TGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN-IFKSAGLNVKEYRYYDPKTKGL--------------DFDGMLEDLR 171 (404)
T ss_pred chHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH-HHHHcCCceeeccccCcccCCc--------------CHHHHHHHHH
Confidence 999999887654554 56789999999988644 44455554433222 0 01111 7899999887
Q ss_pred cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC---Cccccc-cCCCCce---eehh
Q 011959 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY---GGAQEY-FGVTPDL---TTLG 313 (474)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~---~~~~~~-~g~~pdi---~t~s 313 (474)
+..++.+++++..++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+. ...... ....+++ .+||
T Consensus 172 ~~~~~~~~~~~~~p~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfS 250 (404)
T PTZ00376 172 TAPNGSVVLLHACAHNPTGVDPTEEQ-WKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFS 250 (404)
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 54334567777778888999887666 999999999999999999999888 4321 101111 1111233 3799
Q ss_pred hhcC-CCcceEEE---EecHHHHHhhcCC-CCcccccCC-CCChHHHHHHHHHHHHhc---C-----CCHHHHHHHHHHH
Q 011959 314 KIIG-GGLPVGAY---GGRRDIMEMVAPA-GPMYQAGTL-SGNPLAMTAGIHTLKRLK---E-----PGTYEYLNKITGE 379 (474)
Q Consensus 314 K~l~-~G~~iG~~---~~~~~i~~~~~~~-~~~~~~~t~-~~~~~~~aaa~aal~~~~---~-----~~~~~~~~~~~~~ 379 (474)
|.++ +|||+||+ ++++++++.+... ... ...++ +.+++++.++.++|+.-. + .+.+++++++++.
T Consensus 251 K~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~ 329 (404)
T PTZ00376 251 KNMGLYGERIGALHIVCANKEEAANVLSQLKLI-IRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQL 329 (404)
T ss_pred CcccccccccceEEEEeCCHHHHHHHHHHHHHH-HhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 89999998 5788765544210 011 11233 346678888887774211 0 1223445566666
Q ss_pred HHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHC-CeEecccCCcceEEecC-CcH
Q 011959 380 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFEAGFTSLA-HSS 457 (474)
Q Consensus 380 l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~~~~~-~t~ 457 (474)
+.+.|++.....++....+..|.++|+.+. .++++.|+++ ||++.|++ |++++ .+.
T Consensus 330 l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~------------------~~~~~~L~~~~~v~v~p~~----Ris~~~~~~ 387 (404)
T PTZ00376 330 LYDELKALGSPGDWEHIINQIGMFSFTGLT------------------KEQVERLIEKYHIYLLDNG----RISVAGLTS 387 (404)
T ss_pred HHHHHHhcCCCCcccccccCceEEEecCCC------------------HHHHHHHHHhCCEeecCCC----eEEEeccCH
Confidence 666665542110111112334555555441 3577778866 99999874 78775 899
Q ss_pred HHHHHHHHHHHHHHhh
Q 011959 458 DDIQHTITAAEKVLRQ 473 (474)
Q Consensus 458 e~i~~~l~~l~~~~~~ 473 (474)
++++.++++|++++.-
T Consensus 388 ~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 388 KNVDYVAEAIHDVVRN 403 (404)
T ss_pred HhHHHHHHHHHHHHhc
Confidence 9999999999998753
No 190
>PRK09265 aminotransferase AlaT; Validated
Probab=99.93 E-value=2.9e-23 Score=209.47 Aligned_cols=340 Identities=13% Similarity=0.075 Sum_probs=210.1
Q ss_pred CCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHhhC--C-CCCeEEEeCCHHHHHH
Q 011959 97 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAV--P-SIEMVRFVNSGTEACM 169 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~---~~~~~~~la~~l~~~~--~-~~~~v~~~~sGseA~~ 169 (474)
.|+.++||..|.. +++++ .++++.+++.+.+.....|+. ..++++.+++++.... + ..++|++++|+++++.
T Consensus 31 ~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~ 109 (404)
T PRK09265 31 EGHKILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIV 109 (404)
T ss_pred cCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHH
Confidence 4557788877632 33454 578899988887654333432 2345666666664332 2 4678999999999999
Q ss_pred HHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEE
Q 011959 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (474)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (474)
.+++. ...+++.|++.+++|..+...+ ...|..+.........++ .-|++++++.+.. ++++
T Consensus 110 ~~~~~--~~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~v~~~~~~~~~~------------~~d~~~l~~~~~~---~~~~ 171 (404)
T PRK09265 110 MAMQA--LLNNGDEVLVPAPDYPLWTAAV-SLSGGKPVHYLCDEEAGW------------FPDLDDIRSKITP---RTKA 171 (404)
T ss_pred HHHHH--hCCCCCEEEEeCCCCcChHHHH-HHcCCEEEEEecccccCC------------CCCHHHHHHhccc---cceE
Confidence 99884 2345678999888887654433 333332221111000010 0178889888753 4566
Q ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCc--e---eehhhhcC-CCcce
Q 011959 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD--L---TTLGKIIG-GGLPV 322 (474)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pd--i---~t~sK~l~-~G~~i 322 (474)
|++..++|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+.... ......++ + -+|||.++ +|+|+
T Consensus 172 v~l~~P~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~vi~~~S~SK~~~~pGlRi 249 (404)
T PRK09265 172 IVIINPNNPTGAVYSKEL-LEEIVEIARQHNLIIFADEIYDKILYDGAVHI-SIASLAPDLLCVTFNGLSKAYRVAGFRV 249 (404)
T ss_pred EEEECCCCCCCcCCCHHH-HHHHHHHHHHCCCEEEEehhhhhccCCCCCcC-CHHHcCCCceEEEEecchhhccCcccce
Confidence 665555778998887666 999999999999999999999887 4432111 11111222 2 26999996 79999
Q ss_pred EEEEe--cHH----HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHH---HHHHHHHHHHHHHHHHHhhhc-
Q 011959 323 GAYGG--RRD----IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTY---EYLNKITGELTQGIIDAGKKA- 391 (474)
Q Consensus 323 G~~~~--~~~----i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~---~~~~~~~~~l~~~L~~~~~~~- 391 (474)
||+++ +++ +++.+.. ....+++.|.+++.++.++|+..+. +.+. +++.++.+.+.+.|++ +
T Consensus 250 G~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~ 321 (404)
T PRK09265 250 GWMVLSGPKKHAKGYIEGLDM----LASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNA----IP 321 (404)
T ss_pred EEEEEeCchHHHHHHHHHHHH----HhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence 99985 444 3333321 1123456788888888888742111 1121 2334444444444443 3
Q ss_pred CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------CcceEEecCCcHHHHHHHHH
Q 011959 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTIT 465 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~ 465 (474)
++....+..|+++|+.+..... +.....+.+.+.+.++||.+.|+. ..++|+++..++++++++++
T Consensus 322 ~~~~~~p~~g~~l~~~~~~~~~--------~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~ 393 (404)
T PRK09265 322 GVSCVKPKGALYAFPKLDPKVY--------PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIG 393 (404)
T ss_pred CCcccCCCcceEEEEEeccccc--------CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHH
Confidence 2222334457777777743110 000112356678889999998863 23578888889999999999
Q ss_pred HHHHHHhh
Q 011959 466 AAEKVLRQ 473 (474)
Q Consensus 466 ~l~~~~~~ 473 (474)
+|.++++.
T Consensus 394 rl~~~l~~ 401 (404)
T PRK09265 394 RIGRFLSG 401 (404)
T ss_pred HHHHHHHH
Confidence 99998864
No 191
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.93 E-value=3e-23 Score=209.15 Aligned_cols=342 Identities=13% Similarity=0.067 Sum_probs=213.0
Q ss_pred CCCEEEeccCChhhc-cCCCCCHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHH
Q 011959 97 DGNEYIDYVGSWGPA-IIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEA 167 (474)
Q Consensus 97 dG~~~iD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA 167 (474)
.|..++|+..|.... +.-..++.+++++.+.+.... .|+ +..+++..+++.+....+ ..+++++++|+++|
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a 108 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence 466788888874321 112257899999998886532 232 123455666666654322 35789999999999
Q ss_pred HHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCe
Q 011959 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (474)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (474)
+..+++.. ...++.|++.+++|..+.. .....|..+...+.....+. . -|++.+++.+.. ++
T Consensus 109 l~~~~~~l--~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~---------~---~d~~~l~~~~~~---~~ 170 (403)
T TIGR01265 109 IEICIEAL--ANPGANILVPRPGFPLYDT-RAAFSGLEVRLYDLLPEKDW---------E---IDLDGLEALADE---KT 170 (403)
T ss_pred HHHHHHHh--CCCCCEEEEeCCCchhHHH-HHHHcCCEEEEecCCcccCC---------c---cCHHHHHHHhCc---Cc
Confidence 99999952 2456778888888765433 23333433322111100010 0 178999888753 45
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-cccccCCCCcee---ehhhhcC-CCcc
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLT---TLGKIIG-GGLP 321 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pdi~---t~sK~l~-~G~~ 321 (474)
+++++..++|++|.+.+.++ +++|.++|++||+++|+||+|.+| ..+..+ ....+.-.++++ +|||.++ +|+|
T Consensus 171 ~~v~i~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 249 (403)
T TIGR01265 171 VAIVVINPSNPCGSVFSRDH-LQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWR 249 (403)
T ss_pred cEEEEecCCCCCCCCCCHHH-HHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcce
Confidence 66666666778898877666 999999999999999999999988 544221 111111112233 7999976 7999
Q ss_pred eEEEEec--HH-----HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 322 VGAYGGR--RD-----IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 322 iG~~~~~--~~-----i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
+||++++ ++ +++.+.. . ...+++.+.+++.++.++|+...+ ...++.++++.+.+.+.|++ +
T Consensus 250 iG~~v~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 321 (403)
T TIGR01265 250 LGWIIIHDPHGIFRDTVLQGLKN---L-LQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKD----I 321 (403)
T ss_pred EEEEEEeCchhhhHHHHHHHHHH---H-hhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc----C
Confidence 9999873 22 3333321 1 112456688888888888863111 22334444444555555443 3
Q ss_pred -CCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHH-HHCCeEecccC----CcceEEecCCcHHHHHHHHH
Q 011959 392 -GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTIT 465 (474)
Q Consensus 392 -~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~ 465 (474)
++....+..|+++|+.+...... +.....++.+.+ .++||.+.|+. .+++|+++...++.++++++
T Consensus 322 ~~~~~~~p~~g~f~~~~~~~~~~~--------~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~ 393 (403)
T TIGR01265 322 PGLVCPKPEGAMYLMVKLELELFP--------EIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACS 393 (403)
T ss_pred CCceecCCCceeEEEEeccccccC--------CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHH
Confidence 22222355688888887532100 000124566665 47899999874 24678888888999999999
Q ss_pred HHHHHHhh
Q 011959 466 AAEKVLRQ 473 (474)
Q Consensus 466 ~l~~~~~~ 473 (474)
+|.+++++
T Consensus 394 ~l~~~~~~ 401 (403)
T TIGR01265 394 RIKEFCER 401 (403)
T ss_pred HHHHHHHh
Confidence 99998865
No 192
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.93 E-value=2.1e-23 Score=207.71 Aligned_cols=320 Identities=16% Similarity=0.205 Sum_probs=204.0
Q ss_pred EEEeccCChhhccCC-CCCHHHHHHHHHHHH---h-cCCCCC-CCHHHHHHHHHHHhhCC-------CCC-eEEEeCCHH
Q 011959 100 EYIDYVGSWGPAIIG-HADDQVLAALGETMK---K-GTSFGA-PCLLENVLAEMVISAVP-------SIE-MVRFVNSGT 165 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG-~~~p~v~~a~~~~~~---~-~~~~~~-~~~~~~~la~~l~~~~~-------~~~-~v~~~~sGs 165 (474)
++|||.+| ++.+ .++|.+.+++.+..+ . ...++| +.....+|.+.+++++. +.+ .+++++|..
T Consensus 2 ~~I~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSN---APLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQ 78 (363)
T ss_dssp TEEESSSS---STSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHH
T ss_pred CEEEEECC---CCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccc
Confidence 57888888 4444 356666666555443 1 222222 23334444444444442 356 677777656
Q ss_pred HHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEcc-------CCCHHHHHH
Q 011959 166 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP-------FNDVSALEN 238 (474)
Q Consensus 166 eA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~d~~~le~ 238 (474)
+++..++.+.+ ..+++.|++.+++|.+. ...+...|.. ++.++ +.|+++|++
T Consensus 79 ~~~~~~~~~~~-~~~~~~vlv~~P~y~~~-~~~~~~~g~~-------------------~~~~~~~~~~~~~~d~~~l~~ 137 (363)
T PF00155_consen 79 AALFLLLRLLK-INPGDTVLVPDPCYPSY-IEAARLLGAE-------------------VIPVPLDSENDFHLDPEALEE 137 (363)
T ss_dssp HHHHHHHHHHH-SSTTSEEEEEESSSTHH-HHHHHHTTSE-------------------EEEEEEEETTTTEETHHHHHH
T ss_pred cchhhhhhccc-ccccccceecCCccccc-cccccccCce-------------------eeecccccccccccccccccc
Confidence 66655555321 34667888888888774 3333344432 33333 348999999
Q ss_pred HHhcCC-C--CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccC-CCc-c-ccccCCCCcee--
Q 011959 239 LFENNK-G--EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-YGG-A-QEYFGVTPDLT-- 310 (474)
Q Consensus 239 ~l~~~~-~--~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g-~~~-~-~~~~g~~pdi~-- 310 (474)
.+++.+ + ++.+|+++.++|++|...+.++ +++|.++|++||++||+||+|.++..+ ..+ . .....-.++++
T Consensus 138 ~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~-l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~ 216 (363)
T PF00155_consen 138 ALDELPSKGPRPKAVLICNPNNPTGSVLSLEE-LRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVV 216 (363)
T ss_dssp HHHTSHTTTETEEEEEEESSBTTTTBB--HHH-HHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEE
T ss_pred ccccccccccccceeeeccccccccccccccc-ccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceee
Confidence 998642 2 3567777777888999887666 999999999999999999999888333 211 1 22223334433
Q ss_pred -ehhhhcC-CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-----CCHHHHHHHHHHHHHHH
Q 011959 311 -TLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-----PGTYEYLNKITGELTQG 383 (474)
Q Consensus 311 -t~sK~l~-~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-----~~~~~~~~~~~~~l~~~ 383 (474)
+|||.+| .|+|+||+++++++++.++. ... .+..+.+.+.++.+.+..... +...++++++.+++.+.
T Consensus 217 ~S~SK~~g~~GlRvG~i~~~~~~~~~l~~---~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~ 291 (363)
T PF00155_consen 217 GSLSKSFGLPGLRVGYIVAPPELIERLRR---FQR--SGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREA 291 (363)
T ss_dssp EESTTTTTSGGGTEEEEEEEHHHHHHHHH---HHH--HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccccccccccccccchhhhhhhhhh---ccc--cccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHH
Confidence 7999999 79999999999999998873 222 233377777777777654331 33445555555555555
Q ss_pred HHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHC-CeEecccCC----cceEEec-CCcH
Q 011959 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF----EAGFTSL-AHSS 457 (474)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~----~~~~~~~-~~t~ 457 (474)
|++. ++.......|.++++.+.. ....++.+.|+++ ||.+.|+.. ..+|+++ .+++
T Consensus 292 L~~~----~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~ 353 (363)
T PF00155_consen 292 LEEI----GITVLPPEAGFFLWVRLDP--------------NDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSE 353 (363)
T ss_dssp HHHT----TSEEEHHSBSSEEEEEESH--------------HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCH
T ss_pred HHHh----hhheeeccCccEEEEEccc--------------chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCH
Confidence 5443 5444434456666655532 1346788889988 999998642 3678888 8999
Q ss_pred HHHHHHHHHH
Q 011959 458 DDIQHTITAA 467 (474)
Q Consensus 458 e~i~~~l~~l 467 (474)
+++++++++|
T Consensus 354 e~~~~~~~~l 363 (363)
T PF00155_consen 354 EDLEEALERL 363 (363)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhC
Confidence 9999999986
No 193
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.93 E-value=2.7e-23 Score=210.69 Aligned_cols=334 Identities=14% Similarity=0.153 Sum_probs=206.5
Q ss_pred EEEeccCChhhccCCCCC--HHHHHHHHHHHHhc------CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHH
Q 011959 100 EYIDYVGSWGPAIIGHAD--DQVLAALGETMKKG------TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGT 165 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~------~~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGs 165 (474)
..|||..| ++.-... +.+.+++.+.+... ..|+ +..++++.+++++.+.++ .+++|++|+|++
T Consensus 31 ~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGG---NPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCC---CCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 35787776 3321222 35667776665431 1233 234778888888876543 568999999999
Q ss_pred HHHHHHHHHhHhhc------CCcEEEE-EeCCCCCCchhHHHhc---CCCCccCCCCCCCCCCCCCCCceEEccC-CCHH
Q 011959 166 EACMGVLRLARAFT------GRERIIK-FEGCYHGHADPFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPF-NDVS 234 (474)
Q Consensus 166 eA~~~al~~ar~~~------~~~~ii~-~~~~yhg~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~d~~ 234 (474)
+|+..++++ +. .++.|++ .+++|+++...+.... +.+....+.+. + .+.+ -|++
T Consensus 108 ~al~~~~~~---l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~d~~ 172 (416)
T PRK09440 108 SAFFYLFNL---FAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPE----------G--QFKYHVDFE 172 (416)
T ss_pred HHHHHHHHH---HhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccc----------c--ccccCCCHH
Confidence 999999884 33 2467888 6999988654322111 00000000000 0 0011 1677
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCc-cccccCCCCce---e
Q 011959 235 ALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG-AQEYFGVTPDL---T 310 (474)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~-~~~~~g~~pdi---~ 310 (474)
.|+ +. .+++++++.+++|++|.+.+.++ +++|.++|++|+++||+||+|..+.....+ .... ...+.+ .
T Consensus 173 ~l~--~~---~~~~~i~l~~P~NPTG~~~s~~~-~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~-~~~~~vI~~~ 245 (416)
T PRK09440 173 HLH--ID---EDTGAICVSRPTNPTGNVLTDEE-LEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATP-LWNPNIILCM 245 (416)
T ss_pred Hcc--cC---CCceEEEEecCCCCCCccCCHHH-HHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCc-cccCCeEEEe
Confidence 776 22 25667777666788999987666 999999999999999999999643211111 0000 112233 3
Q ss_pred ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCC-----CHHHHHHHHHHHHHHHHH
Q 011959 311 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-----GTYEYLNKITGELTQGII 385 (474)
Q Consensus 311 t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~-----~~~~~~~~~~~~l~~~L~ 385 (474)
+|||...+|+|+||+++++++++.+.. .......+.+.+++.++.++|+.-.-. .+...++++.+.+++.|.
T Consensus 246 SfSK~~~pGlRiG~~i~~~~l~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~ 322 (416)
T PRK09440 246 SLSKLGLPGVRCGIVIADEEIIEALSN---MNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLR 322 (416)
T ss_pred cccccCCCcceEEEEeCCHHHHHHHHH---HHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799974489999999999999988863 222223466888998888887521100 122333444455555555
Q ss_pred HHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-------------cceEEe
Q 011959 386 DAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------------EAGFTS 452 (474)
Q Consensus 386 ~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-------------~~~~~~ 452 (474)
+.+...++....+..|.++|+.+..... ...++.+.|.++||.+.|+.. +++|++
T Consensus 323 ~~l~~~~~~~~~p~gg~fiw~~~~~~~~------------~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis 390 (416)
T PRK09440 323 RYLPDEPCLIHKPEGAIFLWLWFKDLPI------------TTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMN 390 (416)
T ss_pred HhcccCCeEEecCCCceEEEEECCCCCC------------CHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEE
Confidence 5433222222233457888887743110 124677788899999988521 257888
Q ss_pred cCCcHHHHHHHHHHHHHHHhh
Q 011959 453 LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 453 ~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+..+++++++++++|.+++++
T Consensus 391 ~~~~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 391 YVQDDEEIEKGIAILAEEVEK 411 (416)
T ss_pred ecCCHHHHHHHHHHHHHHHHH
Confidence 877999999999999998864
No 194
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.9e-23 Score=205.39 Aligned_cols=309 Identities=15% Similarity=0.137 Sum_probs=197.9
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHh
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~a 175 (474)
.|..++||..|. ++++ .+|.+.+++.+.+.......|+.....+|.+.+++++. +.++|++++|+++++..+++
T Consensus 16 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~-- 90 (337)
T PRK03967 16 EGNYRIWLDKNE--NPFD-LPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVK-- 90 (337)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH--
Confidence 345678888774 4554 57889999998875422223344445667777777765 67899999999999988777
Q ss_pred HhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011959 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
.+ .++.|++.+++|..+. ......|..+..++.....+ -|++.+++.+. +++++++..+
T Consensus 91 -~~-~gd~V~v~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~~~~----~~~~v~~~~P 149 (337)
T PRK03967 91 -LF-EGKHIVITPPTFGMYS-FYAKLNGIPVIDVPLKEDFT--------------IDGERIAEKAK----NASAVFICSP 149 (337)
T ss_pred -Hh-CCCeEEEeCCChHHHH-HHHHHcCCeEEEeecCCCCC--------------cCHHHHHHhcc----CCCEEEEeCC
Confidence 34 4678999999986532 23334444332221110001 16788877643 3445555555
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDI 331 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i 331 (474)
+|++|.+.+ .++|.++++ +++++|+||+|.+|..... .......++++ +|||.++ +|+|+||+++++++
T Consensus 150 ~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~~~~--~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~ 222 (337)
T PRK03967 150 NNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSGKSL--IGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEI 222 (337)
T ss_pred CCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcccch--HHHHhhCCCEEEEecchHhhcchhhhheeeecCHHH
Confidence 788999988 566777774 7999999999988721111 11112223443 7999999 89999999999999
Q ss_pred HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEec
Q 011959 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (474)
Q Consensus 332 ~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (474)
++.+.... ..++.+.+++.++.++|+..+. .+.++.+.+.++.+.+.|.+ +. .++.|.++++.+
T Consensus 223 i~~~~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~----~~~~~~~~~~~~-- 287 (337)
T PRK03967 223 IDALYRIK-----PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGE----YA----YPSDANFLLLKL-- 287 (337)
T ss_pred HHHHHhhc-----CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcc----Cc----CCCCCcEEEEhH--
Confidence 98887421 2456688898888888753211 12222333333334433332 21 235566666543
Q ss_pred CCCcCcccccccchHHHHHHHHHHHHCCeEecccC---CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.+.+.|+++||.+.+.. .+++|+++. +.++.+++++.|+++..
T Consensus 288 ------------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~-~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 ------------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG-KREENDEFIKALKEIKE 333 (337)
T ss_pred ------------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHH
Confidence 25688889999997642 235777755 56788888888887764
No 195
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=8.6e-23 Score=209.29 Aligned_cols=307 Identities=13% Similarity=0.078 Sum_probs=192.3
Q ss_pred CCHHHHHHHHHHHhhCC-----CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC
Q 011959 137 PCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 211 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~-----~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~ 211 (474)
..+++.++++++.+.++ ++++|++|+|+++|++.+++. ....++.|++.+|+|.+.........|..+..++.
T Consensus 96 ~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~--l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~ 173 (496)
T PLN02376 96 LKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFC--LADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPC 173 (496)
T ss_pred cHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHH--hCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeC
Confidence 46788889998887542 568999999999999999983 23445778888888888544332234544333222
Q ss_pred CCCCCCCCCCCCceEEccCCCHHHHHHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011959 212 PDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (474)
Q Consensus 212 ~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (474)
....+. . -|++++++.+++ ...++++|++..++|++|.+.+.++ +++|.++|++||++||+||+
T Consensus 174 ~~~~~~---------~---~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~-l~~L~~~a~~~~i~lI~DEi 240 (496)
T PLN02376 174 SSSDNF---------K---LTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDT-LTNLVRFVTRKNIHLVVDEI 240 (496)
T ss_pred CCCccC---------c---CCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHH-HHHHHHHHHHcCCEEEEEcC
Confidence 100110 0 067888765432 1236777777777788999887666 99999999999999999999
Q ss_pred ccCc-ccCCCcc--ccc---cC---CCCc----eeehhhhcC-CCcceEEEEe-cHHHHHhhcCCCCcccccCCCCChHH
Q 011959 289 MTGF-RLAYGGA--QEY---FG---VTPD----LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLA 353 (474)
Q Consensus 289 ~~g~-r~g~~~~--~~~---~g---~~pd----i~t~sK~l~-~G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~ 353 (474)
|..+ ..+..+. .+. ++ ..++ +.+|||.|+ +|+|+||+++ ++.+.+.+.. .. .....+.++
T Consensus 241 Y~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~---~~--~~~~vs~~~ 315 (496)
T PLN02376 241 YAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARK---MS--SFGLVSSQT 315 (496)
T ss_pred ccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHH---Hh--hcCCCCHHH
Confidence 9887 4442221 111 11 1233 237999998 8999999998 4566665542 11 112356777
Q ss_pred HHHHHHHHHHhcCCCHH-HHH---HHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHH
Q 011959 354 MTAGIHTLKRLKEPGTY-EYL---NKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 429 (474)
Q Consensus 354 ~aaa~aal~~~~~~~~~-~~~---~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 429 (474)
+.++.+.|+ +.++. +.+ ++..+..++.+.+.+.+.++....+..|+++|+.+...-.. ....+...+
T Consensus 316 Q~a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~------~~~~~~e~~ 386 (496)
T PLN02376 316 QLMLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRD------RNSFESEIE 386 (496)
T ss_pred HHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhcc------CCchhHHHH
Confidence 777776664 33332 222 22222222333333333444333345678888887431000 001112246
Q ss_pred HHHHHHH-CCeEecccC------CcceEEecC-CcHHHHHHHHHHHHHHHh
Q 011959 430 FYRGMLE-EGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 430 ~~~~l~~-~Gv~v~~~~------~~~~~~~~~-~t~e~i~~~l~~l~~~~~ 472 (474)
+++.+++ .||.+.|+. .+++|+++. .+++++++++++|.+++.
T Consensus 387 l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 387 LWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred HHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 7777776 599999873 236788887 588999999999999875
No 196
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.3e-22 Score=202.19 Aligned_cols=329 Identities=14% Similarity=0.111 Sum_probs=212.9
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhc----CCC---CCCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG----TSF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEAC 168 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~----~~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~ 168 (474)
...+||..+ ++-...++.+.+++.+.+... ..| .+..+++..+++++...+. .++++++++|+++++
T Consensus 33 ~~~~~l~~g---~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al 109 (394)
T PRK06836 33 DNVFDFSLG---NPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGAL 109 (394)
T ss_pred CCeEEecCc---CCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHH
Confidence 356788776 332235788999888776542 112 1234666777777766542 468899999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCC-CCCCCCCCCceEEccCCCHHHHHHHHhcCCCCe
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (474)
..+++.. ...++.|++.+++|.++.. .+...|..+..++.... .++ |++++++.++. ++
T Consensus 110 ~~~~~~l--~~~gd~Vli~~p~~~~~~~-~~~~~g~~v~~v~~~~~~~~~--------------d~~~l~~~~~~---~~ 169 (394)
T PRK06836 110 NVALKAI--LNPGDEVIVFAPYFVEYRF-YVDNHGGKLVVVPTDTDTFQP--------------DLDALEAAITP---KT 169 (394)
T ss_pred HHHHHHh--cCCCCEEEEcCCCCccHHH-HHHHcCCEEEEEecCCccCcC--------------CHHHHHhhcCc---Cc
Confidence 9998842 3455778888888877543 33334443332221110 011 78999998863 56
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHH------hCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKE------NGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG 317 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~------~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~ 317 (474)
++|++..++|++|.+.+.++ +++|.++|++ ||+++|+||+|.+| ..+.... ......++++ +|||.++
T Consensus 170 ~~v~~~~p~NPtG~~~~~~~-~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~ 247 (394)
T PRK06836 170 KAVIINSPNNPTGVVYSEET-LKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP-YIFKYYDNSIVVYSFSKSLS 247 (394)
T ss_pred eEEEEeCCCCCCCcCCCHHH-HHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC-ChHHccCcEEEEecchhhcc
Confidence 77777777888999888777 9999999999 89999999999888 4332111 1111122333 7999999
Q ss_pred -CCcceEEEEecHHHHHh---hcCCCCcc-cccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011959 318 -GGLPVGAYGGRRDIMEM---VAPAGPMY-QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (474)
Q Consensus 318 -~G~~iG~~~~~~~i~~~---~~~~~~~~-~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (474)
+|+|+||+++++++.+. +....... ..+..+.+++.+.++...++ +....+.++++.+.+.+.|++ ++
T Consensus 248 ~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~r~~l~~~L~~----~g 320 (394)
T PRK06836 248 LPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD---ATVDVSIYKRNRDLLYDGLTE----LG 320 (394)
T ss_pred CcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHh----CC
Confidence 89999999998876432 11000000 11123556777777665553 222344556666666666654 34
Q ss_pred CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHHHHHHHHH
Q 011959 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAE 468 (474)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~ 468 (474)
+....+..|.++++.+... ...++++.|.++||.+.|+. .+++|+++..+++++++++++|+
T Consensus 321 ~~~~~~~gg~~~~~~~~~~--------------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~ 386 (394)
T PRK06836 321 FECVKPQGAFYLFPKSPEE--------------DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFE 386 (394)
T ss_pred CEeecCCceEEEEEeCCCC--------------CHHHHHHHHHhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 3322333456666654221 12466788889999999873 24678888889999999999999
Q ss_pred HHHhh
Q 011959 469 KVLRQ 473 (474)
Q Consensus 469 ~~~~~ 473 (474)
+++++
T Consensus 387 ~~l~~ 391 (394)
T PRK06836 387 KLAKE 391 (394)
T ss_pred HHHHH
Confidence 99875
No 197
>PRK08354 putative aminotransferase; Provisional
Probab=99.92 E-value=1.3e-22 Score=197.40 Aligned_cols=298 Identities=16% Similarity=0.094 Sum_probs=191.8
Q ss_pred CCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhH
Q 011959 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 176 (474)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar 176 (474)
+...+|||..|. ++++ +|.+.+++.+.+.....| +. ...|.++++++++ ++|++|+|+++|+..++.
T Consensus 6 ~~~~~i~l~~~~--np~~--p~~~~~a~~~~~~~~~~y--p~--~~~l~~~ia~~~~--~~I~vt~G~~~al~~~~~--- 72 (311)
T PRK08354 6 REEGLIDFSASV--NPYP--PEWLDEMFERAKEISGRY--TY--YEWLEEEFSKLFG--EPIVITAGITEALYLIGI--- 72 (311)
T ss_pred CccceeEecCCC--CCCC--CHHHHHHHHHHHHHhhcC--CC--hHHHHHHHHHHHC--CCEEECCCHHHHHHHHHH---
Confidence 445689998874 5654 688999998876543323 32 3557777777764 579999999999988775
Q ss_pred hhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcccc
Q 011959 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (474)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (474)
.+.+++.|++.+++|.++...+ ...|..+ ..++ .|++.+++.+++ ....++++| +
T Consensus 73 ~~~~gd~vlv~~P~y~~~~~~~-~~~g~~~-------------------~~~~-~d~~~l~~~~~~---~~~vi~~~P-~ 127 (311)
T PRK08354 73 LALRDRKVIIPRHTYGEYERVA-RFFAARI-------------------IKGP-NDPEKLEELVER---NSVVFFCNP-N 127 (311)
T ss_pred hhCCCCeEEEeCCCcHHHHHHH-HHcCCEE-------------------eecC-CCHHHHHHhhcC---CCEEEEecC-C
Confidence 3346788999999998754433 3333322 1112 278888887762 234555566 6
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehhhhcC-CCcceEEEEecHHHHHh
Q 011959 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEM 334 (474)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~sK~l~-~G~~iG~~~~~~~i~~~ 334 (474)
|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+.. .. .....-+-+|||+++ +|+|+||+++ +.+.
T Consensus 128 NPTG~~~~~~~-l~~l~~~a~~~~~~li~De~y~~f~~~~~~--~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~ 200 (311)
T PRK08354 128 NPDGKFYNFKE-LKPLLDAVEDRNALLILDEAFIDFVKKPES--PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEEA 200 (311)
T ss_pred CCCCCccCHHH-HHHHHHHhhhcCcEEEEeCcchhccccccc--cC-CCcEEEEeccHhhcCCccceeeeeee---hHHH
Confidence 78898887666 999999999999999999999988 43321 11 111111237999999 9999999988 4444
Q ss_pred hcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCc
Q 011959 335 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY 414 (474)
Q Consensus 335 ~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~ 414 (474)
++... ..+..+.++++++.+.++ + ..++++++.+.+++..+.+..... .++.|.++.+.+.+
T Consensus 201 l~~~~-----~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~~~---- 262 (311)
T PRK08354 201 FRSVR-----MPWSIGSTGYAFLEFLIE----D-DFEHLRKTMPLIWREKERFEKALY----VKSDANFFIKDVGD---- 262 (311)
T ss_pred HHHcC-----CCccCCHHHHHHHHHHHH----h-HHHHHHHHHHHHHHHHHHHHHhcC----CCCCCcEEEEECCC----
Confidence 44211 134455555555554443 2 234555555555555544322111 24567776654321
Q ss_pred CcccccccchHHHHHHHHHHHHCCeEecccCC----cceEEecCCcHHHHHHHHHHHHHH
Q 011959 415 NFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
..++++.|.++||.+.++.. +++|+++. +.++.+++++.|+++
T Consensus 263 ------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 309 (311)
T PRK08354 263 ------------AEKFVEFLKRNGILVRDCTSFGLPGYIRFSVR-DREENEKLIRALREW 309 (311)
T ss_pred ------------HHHHHHHHHHCCeEEEecccCCCCCeEEEEeC-CHHHHHHHHHHHHHh
Confidence 14678889999999998742 45677665 445677777777764
No 198
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=1.4e-22 Score=205.42 Aligned_cols=346 Identities=12% Similarity=0.113 Sum_probs=212.3
Q ss_pred EEEcC--CCEEEeccCChhhccCCCCCHHHHHHHHHHHHh-------------cCC---CCCCCHHHHHHHHHHHhhCC-
Q 011959 93 MWDID--GNEYIDYVGSWGPAIIGHADDQVLAALGETMKK-------------GTS---FGAPCLLENVLAEMVISAVP- 153 (474)
Q Consensus 93 ~~d~d--G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~-------------~~~---~~~~~~~~~~la~~l~~~~~- 153 (474)
.||.+ -+-||++...- |.| .+..+.+.+++..+. ... +.+...++.++|+.+.++++
T Consensus 39 ~~~~~~np~g~i~l~~ae--N~l--~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~ 114 (447)
T PLN02607 39 PYDESHNPSGVIQMGLAE--NQV--SFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGG 114 (447)
T ss_pred CCCcccCCCceEEEechh--hhh--hHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCC
Confidence 35543 33477765442 323 456677666664320 011 12346788889999887642
Q ss_pred ----CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEcc
Q 011959 154 ----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 229 (474)
Q Consensus 154 ----~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~ 229 (474)
.+++|++|+|+++|++.++.. ....++.|++..|.|.+.........|..+..+......++ .
T Consensus 115 ~~~v~p~~Ivit~G~t~al~~l~~~--l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f-----------~ 181 (447)
T PLN02607 115 KARFDPDRIVLTAGATAANELLTFI--LADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNF-----------Q 181 (447)
T ss_pred CCCcCHHHeEEcCChHHHHHHHHHH--hCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCC-----------c
Confidence 467999999999999998773 23456778888888877644332233433322211101111 0
Q ss_pred CCCHHHHHHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc--ccc-
Q 011959 230 FNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA--QEY- 302 (474)
Q Consensus 230 ~~d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~--~~~- 302 (474)
-|++++++.+++ .+.+++++++..++|++|.+.+.++ +++|.++|++|++.||+||+|.++ ..+..+. .+.
T Consensus 182 -~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~-l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~ 259 (447)
T PLN02607 182 -VTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSV-LEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIV 259 (447)
T ss_pred -CCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHH-HHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHH
Confidence 178899888764 2236777777666788898887655 999999999999999999999875 3322221 111
Q ss_pred --cCC-C-Cc-e---eehhhhcC-CCcceEEEEe-cHHHHHhhcCCCCcccccCC-CCChHHHHHHHHHHHHhcCCCHH-
Q 011959 303 --FGV-T-PD-L---TTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTL-SGNPLAMTAGIHTLKRLKEPGTY- 370 (474)
Q Consensus 303 --~g~-~-pd-i---~t~sK~l~-~G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~-~~~~~~~aaa~aal~~~~~~~~~- 370 (474)
.+. . ++ + .+|||.|| +|+|+||+++ ++++++.+.. . ..+ ..+.+++.++.+.|+ ++++.
T Consensus 260 ~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~---~---~~~~~~s~~~q~~~~~~L~---d~~~~~ 330 (447)
T PLN02607 260 EARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR---M---SSFTLVSSQTQHLLASMLS---DEEFTE 330 (447)
T ss_pred hhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHH---H---hhcCCCCHHHHHHHHHHhC---CchhHH
Confidence 111 1 22 2 27999999 8999999987 6777776652 1 122 346667766666554 33333
Q ss_pred HHHHHHHHHHHH---HHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHH-CCeEecccC-
Q 011959 371 EYLNKITGELTQ---GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ- 445 (474)
Q Consensus 371 ~~~~~~~~~l~~---~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~- 445 (474)
+.+.++.+++++ .+.+.+.++++....+..|+++|+.+.... ..+..+...++++.+++ +||.+.|+.
T Consensus 331 ~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~-------~~~~~~~e~~l~~~ll~~~gV~v~pG~~ 403 (447)
T PLN02607 331 NYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLL-------ETPTREGELALWDSILREVKLNISPGSS 403 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhh-------cCCCchhHHHHHHHHHHhCCEEEcCccc
Confidence 233333333322 233333344544333456888898874310 00111122456766665 699999873
Q ss_pred -----CcceEEecCC-cHHHHHHHHHHHHHHHhh
Q 011959 446 -----FEAGFTSLAH-SSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 446 -----~~~~~~~~~~-t~e~i~~~l~~l~~~~~~ 473 (474)
.+++|+++.. +++++++++++|.+++++
T Consensus 404 f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 404 CHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 2467888885 899999999999998853
No 199
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.92 E-value=1.8e-22 Score=201.20 Aligned_cols=294 Identities=12% Similarity=0.117 Sum_probs=184.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCC
Q 011959 140 LENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK 219 (474)
Q Consensus 140 ~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~ 219 (474)
...++.+.+++++ +.+.+++++||++++..++... ...++.|++....++... ..+...|..
T Consensus 52 ~~~~~~e~lA~~~-g~~~~~i~~g~~~a~~~~~~~l--~~~gd~Vl~~~~~h~s~~-~~~~~~g~~-------------- 113 (370)
T TIGR02539 52 PIHDFLEDLAEFL-GMDEARVTHGAREGKFAVMHAL--CKEGDWVVLDGLAHYTSY-VAAERAGLN-------------- 113 (370)
T ss_pred HHHHHHHHHHHHh-CCCceEEECChHHHHHHHHHHh--hCCCCEEEECCcccHHHH-HHHHHcCCE--------------
Confidence 4567777788887 5677888999999999998842 233455555444544433 333333332
Q ss_pred CCCCceEEccCC-------CHHHHHHHHhcC----CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011959 220 GATYETLTAPFN-------DVSALENLFENN----KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (474)
Q Consensus 220 ~~~~~~~~~~~~-------d~~~le~~l~~~----~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (474)
+..+|++ |+++|++.++.. .+++++|+++.+++++|.+.+ +++|.++|++||++||+||+
T Consensus 114 -----~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea 184 (370)
T TIGR02539 114 -----VKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCA 184 (370)
T ss_pred -----EEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECc
Confidence 3333332 899999988642 125678888888888999988 99999999999999999999
Q ss_pred ccCcccCCCccccccCCCCcee--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCC-----CCChHHHHHHHHHH
Q 011959 289 MTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL-----SGNPLAMTAGIHTL 361 (474)
Q Consensus 289 ~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~-----~~~~~~~aaa~aal 361 (474)
|.....+. .. ....+|++ |++|++++|.|+||+++++++++.+......+...+. .....++.++.+++
T Consensus 185 ~~~g~~~~--~~--~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 260 (370)
T TIGR02539 185 YTVGRMPV--SA--KEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASF 260 (370)
T ss_pred cccCCcCC--CH--HHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHH
Confidence 96211110 11 11235654 7999999777899999999999988753322111110 11223555666667
Q ss_pred HHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCee--EEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCC
Q 011959 362 KRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG 438 (474)
Q Consensus 362 ~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 438 (474)
+...+ -....+..++.++++++|+++ ++.. ..+....++.+.+.... .....+......+.+.|.++|
T Consensus 261 ~~~~~~l~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~s~t~~v~~~~~~~~-----~~~~~~~~~~~~~~~~L~e~G 331 (370)
T TIGR02539 261 PHVVERVKRWDEEVKKTRWFVAELEDI----GFIQLGQKPKEHDLVKFETPGFH-----EIAQKHKRRGYFLYEELKKRG 331 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC----CcEEEccCCCcCceEEEECCchh-----HHhhhhccccHHHHHHHHhCC
Confidence 64322 111223334456788888765 3221 11234555554432100 000011122356889999999
Q ss_pred eE-ecccCCcceEEe-cCCcHHHHHHHHHHHHHHHhh
Q 011959 439 VY-FAPSQFEAGFTS-LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 439 v~-v~~~~~~~~~~~-~~~t~e~i~~~l~~l~~~~~~ 473 (474)
|+ +.++....+|++ ..+|++|+++++++|++++++
T Consensus 332 I~~ir~~~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 332 IHGIRSGQTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred CccccCCcceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 98 776544567776 568999999999999998875
No 200
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.92 E-value=1.8e-22 Score=203.53 Aligned_cols=335 Identities=15% Similarity=0.119 Sum_probs=199.7
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc------CCCC---CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG------TSFG---APCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 168 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~------~~~~---~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~ 168 (474)
|..++|+..|. ..++ .+|.+.+++.+.+.+. ..|+ +...+++++++.+.+..-..++|++|+|+++++
T Consensus 32 ~~~~i~l~~~~--~~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGD--TTQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 46678888773 2233 4788999998887653 1122 223555666665432112578999999999999
Q ss_pred HHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCC-CCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCe
Q 011959 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGS-GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (474)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~-~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (474)
..... .+.+++.|++.+|+|.++...+. ..|. ++.. ..+. ...+..++.+.-+.+..-+.+. .++
T Consensus 109 ~~l~~---l~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~~-----~~~~----~~~~~~v~~~~~~~~~~~~~~~-~~~ 174 (402)
T TIGR03542 109 FRLQS---LFGSDNTVAVQDPVYPAYVDSNV-MAGRAGVLD-----DDGR----YSKITYLPCTKENNFIPDLPEE-PKI 174 (402)
T ss_pred HHHHH---hcCCCCEEEEeCCCCcchHHHHH-HcCCccccc-----cccc----cceEEEeecchhhCCCCCcccc-CCc
Confidence 87544 34566789999999988654443 3332 1110 0000 0022333321100110001111 256
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC-Ccc-ccccCCC---CceeehhhhcC-CCc
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGA-QEYFGVT---PDLTTLGKIIG-GGL 320 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~-~~~~g~~---pdi~t~sK~l~-~G~ 320 (474)
++|++..++|++|.+.+.++ +++|.++|++||++||+||+|..| ..+. ... ....+.. ..+.+|||.+| +|+
T Consensus 175 ~~i~l~nP~NPTG~~~s~~~-~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGl 253 (402)
T TIGR03542 175 DIIYLCSPNNPTGTVLTKEQ-LKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGV 253 (402)
T ss_pred eEEEEeCCCCCCCccCCHHH-HHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCc
Confidence 77777677788998887666 999999999999999999999988 4332 111 1111111 12337999998 899
Q ss_pred ceEEEEecHHHH--------HhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhh
Q 011959 321 PVGAYGGRRDIM--------EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGK 389 (474)
Q Consensus 321 ~iG~~~~~~~i~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 389 (474)
|+||++++++++ ..+.. .......+.+.+++.++.+.++.-.. .+..+.++++.+.+.+.|++
T Consensus 254 RiG~~i~~~~l~~~~~~~~~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~--- 327 (402)
T TIGR03542 254 RLGWTVVPKELTYADGHSVIQDWER---RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA--- 327 (402)
T ss_pred ceEEEEecHHHhhcchhhHHHHHHH---HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh---
Confidence 999999998876 22210 01111224577888777666642110 11233344444555555544
Q ss_pred hcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC------CcceEEecCCcHHHHHH
Q 011959 390 KAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQH 462 (474)
Q Consensus 390 ~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~e~i~~ 462 (474)
+++....+..|.++++.+... ....++.+.|+ ++||.+.|+. .+++|+++..+++++++
T Consensus 328 -~~~~~~~~~~~~f~~v~l~~~-------------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~ 393 (402)
T TIGR03542 328 -AGFKVYGGEHAPYLWVKTPEG-------------ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVE 393 (402)
T ss_pred -cCceecCCCceeEEEEECCCC-------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHH
Confidence 333222223567888877421 01246777777 5699998863 24578887779999999
Q ss_pred HHHHHHHH
Q 011959 463 TITAAEKV 470 (474)
Q Consensus 463 ~l~~l~~~ 470 (474)
++++|+++
T Consensus 394 ~l~~l~~~ 401 (402)
T TIGR03542 394 ACERIKEA 401 (402)
T ss_pred HHHHHHhh
Confidence 99999875
No 201
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.7e-23 Score=206.94 Aligned_cols=305 Identities=13% Similarity=0.117 Sum_probs=198.3
Q ss_pred EEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhc
Q 011959 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT 179 (474)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~ 179 (474)
.+|+.+|. +++|. ++.+. .... ..||.....+|+++++++++ ..++|++++|++|++..+++. +.
T Consensus 30 ~~~l~~Ne--np~~~-~~~~~------~~~~--~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~---~~ 95 (351)
T PRK01688 30 DVWLNANE--YPTAV-EFQLT------QQTL--NRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRA---FC 95 (351)
T ss_pred ceEecCCC--CCCCC-Chhhc------cccc--ccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHH---hc
Confidence 57887775 66763 34321 1112 22455556789999998887 678999999999999999984 43
Q ss_pred C--CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccC
Q 011959 180 G--RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (474)
Q Consensus 180 ~--~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (474)
+ ++.|++.+++|..+. ......|..+..++...... -|++++++.+. ++++|++..++|
T Consensus 96 ~~g~~~vli~~P~y~~y~-~~~~~~G~~~~~v~~~~~~~--------------~d~~~l~~~~~----~~~lv~l~nPnN 156 (351)
T PRK01688 96 EPGKDAILYCPPTYGMYS-VSAETIGVEIRTVPTLDNWQ--------------LDLPAIADNLD----GVKVVYVCSPNN 156 (351)
T ss_pred CCCCCEEEEcCCCHHHHH-HHHHHcCCEEEEeecCCCCC--------------CCHHHHHHhcc----CCcEEEEeCCCC
Confidence 3 367888889886543 33334444333221110001 17888887763 456666666678
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHHH
Q 011959 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIM 332 (474)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i~ 332 (474)
++|.+.+.++ +++|.+.|++ +++||+||+|..| .... ........++++ ||||++| +|+|+||++++++++
T Consensus 157 PTG~~~~~~~-l~~l~~~~~~-~~~vivDEay~~f~~~~s--~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i 232 (351)
T PRK01688 157 PTGNLINPQD-LRTLLELTRG-KAIVVADEAYIEFCPQAS--LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVI 232 (351)
T ss_pred CCCCCCCHHH-HHHHHHhCCC-CcEEEEECchhhcCCCCC--hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHH
Confidence 8999887655 7778777776 6899999999887 3211 112222234544 7999999 899999999999999
Q ss_pred HhhcCCCCcccccCCCCChHHHHHHHHHHHHh--cC-CCHHHHHHHHHHHHHHHHHHHhhhcCCe-eEEeeeceeEEEEE
Q 011959 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE-PGTYEYLNKITGELTQGIIDAGKKAGHA-ICGGYISGMFGFFF 408 (474)
Q Consensus 333 ~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~--~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~v~~~g~~~~i~~ 408 (474)
+.+.+. ...++.|.+++.++.++|+.. +. .+..+.+.+.++++.+.|++ ++.. ...++.++++++.+
T Consensus 233 ~~l~~~-----~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~ps~~nfi~~~~ 303 (351)
T PRK01688 233 NLLLKV-----IAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKE----IPCVEQVFDSETNYILARF 303 (351)
T ss_pred HHHHhc-----cCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHh----CCCCCeECCCCCcEEEEEc
Confidence 888742 124567777787877777521 00 22233444444555555543 3222 23355677777665
Q ss_pred ecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----CcceEEecCCcHHHHHHHHHHHH
Q 011959 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTITAAE 468 (474)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~~~~~~t~e~i~~~l~~l~ 468 (474)
.+ ..++.+.|+++||++++.+ .+++|+++. +++++++++++|+
T Consensus 304 ~~----------------~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~-~~~e~~~l~~al~ 351 (351)
T PRK01688 304 TA----------------SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG-TREECQRVIDALR 351 (351)
T ss_pred CC----------------HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC-CHHHHHHHHHhhC
Confidence 21 2578889999999998643 245788755 7899999998873
No 202
>PRK07908 hypothetical protein; Provisional
Probab=99.91 E-value=3.8e-22 Score=197.45 Aligned_cols=312 Identities=13% Similarity=0.132 Sum_probs=197.3
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 176 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar 176 (474)
+..++||..|. ++++ .++.+++++.+.+.....|.. .....+|.+.++++++ ..++|++|+|+++++..+++
T Consensus 21 ~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--- 93 (349)
T PRK07908 21 GPGLLDFAVNV--RHDT-PPEWLRERLAARLGDLAAYPS-TEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--- 93 (349)
T ss_pred CCCeEEecCCC--CCCC-CCHHHHHHHHHHhhHhhcCCC-ccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh---
Confidence 56899998873 3344 688899999998765433321 2234566666666665 67899999999999998877
Q ss_pred hhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcccc
Q 011959 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (474)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (474)
+ .++++++..++|.... ..+...|..+..++.....++ |++.+ + ++++++++..++
T Consensus 94 -l-~~~~viv~~P~y~~~~-~~~~~~G~~i~~v~~~~~~~~--------------d~~~l----~---~~~~~i~l~np~ 149 (349)
T PRK07908 94 -L-RPRRAAVVHPSFTEPE-AALRAAGIPVHRVVLDPPFRL--------------DPAAV----P---DDADLVVIGNPT 149 (349)
T ss_pred -c-CCCeEEEeCCCChHHH-HHHHHcCCEEEeeccCcccCc--------------ChhHh----c---cCCCEEEEcCCC
Confidence 2 2367777888886643 333344543322211100010 44433 2 245677776667
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHHH
Q 011959 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIM 332 (474)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i~ 332 (474)
|++|.+.+ .++|.++|++ +.++|+||+|..|..+........+. ++++ +|||.++ +|+|+||++++++++
T Consensus 150 NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~-~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~ 223 (349)
T PRK07908 150 NPTSVLHP----AEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDL-PGVLVLRSLTKTWSLAGLRVGYALGAPDVL 223 (349)
T ss_pred CCCCCCcC----HHHHHHHHhc-CCEEEEECcchhhccCCccccccccC-CCEEEEeecccccCCccceeeeeecCHHHH
Confidence 88999998 5567888864 78888999998762222111111121 2333 7999999 899999999999999
Q ss_pred HhhcCCCCcccccCCCCChHHHHHHHHHHHHhc-C--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEe
Q 011959 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-E--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (474)
Q Consensus 333 ~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (474)
+.+.+.. . .+..+++.++++.+.++... + ++..++++++++++.+.|++ +++....+..|+++++.+.
T Consensus 224 ~~~~~~~---~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~~~~~~~~ 294 (349)
T PRK07908 224 ARLTRGR---A--HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA----VGARVVDPAAAPFVLVRVP 294 (349)
T ss_pred HHHHhcC---C--CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh----CCcEeccCCCceEEEEECC
Confidence 9887421 1 24455666665554443100 0 22334444445555555543 3433333356888887763
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
+ ...+.+.|.++||.+.++. .+++|+++ .+++++++++++|++++.
T Consensus 295 ~----------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~-~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 295 D----------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV-RPRAEVPVLVQALAEILK 346 (349)
T ss_pred c----------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe-CCCccHHHHHHHHHHHHh
Confidence 2 1467788889999998752 24678887 478899999999998765
No 203
>PLN02721 threonine aldolase
Probab=99.91 E-value=3.4e-22 Score=198.32 Aligned_cols=331 Identities=17% Similarity=0.162 Sum_probs=198.3
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHH-HHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhh
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGET-MKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 178 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~ 178 (474)
+++||.++.+. ..+|.+.+++.+. ... ..+ ++.+...+|.+.+++++ +.+.++++++|++++..++... .
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~~~~~-~~~-~~~~~~~~l~~~la~~~-~~~~~~~~~~Gs~a~~~~l~~~--~ 76 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANAEVDD-DVL-GYDPTALRLEEEMAKIF-GKEAALFVPSGTMGNLISVLVH--C 76 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhccCCC-ccc-CCCHHHHHHHHHHHHHh-CCceeEEecCccHHHHHHHHHH--c
Confidence 46788888533 3689999998764 221 122 23444678888888888 4566889999999998888742 2
Q ss_pred c-CCcEEEEEeCCCCCCchh--HHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC----CCCeEEEE
Q 011959 179 T-GRERIIKFEGCYHGHADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN----KGEIAAII 251 (474)
Q Consensus 179 ~-~~~~ii~~~~~yhg~~~~--~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~----~~~~a~vi 251 (474)
. +++.|++.+++|...... .....|..+..+ +..+.. ..|++++++.+++. .+++++|+
T Consensus 77 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v--~~~~~~------------~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 77 DVRGSEVILGDNSHIHLYENGGISTLGGVHPRTV--KNNEDG------------TMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred cCCCCeEEEcCccceehhcccchhhhcCceeEec--CCCcCC------------CcCHHHHHHHHHhccCCCCCcceEEE
Confidence 2 567888888876433321 222223222111 110000 01799999998742 13678899
Q ss_pred EccccCC-CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC-CccccccCCCCc--eeehhhhcCCCcceEE-E
Q 011959 252 LEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPD--LTTLGKIIGGGLPVGA-Y 325 (474)
Q Consensus 252 ~ep~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pd--i~t~sK~l~~G~~iG~-~ 325 (474)
+++++++ +|.+. +.+.+++|.++|++||++||+||+|. + .... ...........| ++++||++++ |+|+ +
T Consensus 143 l~~~~~np~G~~~-~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~--~~G~~~ 218 (353)
T PLN02721 143 LENTHANCGGRCL-SVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKAADSVSVCLSKGLGA--PVGSVI 218 (353)
T ss_pred EeccccccCCccc-cHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhhCCEEEEecccccCC--ceeeEE
Confidence 9887766 55555 45559999999999999999999984 2 1000 001111111233 4579999974 5776 5
Q ss_pred EecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCee-EEeeeceeE
Q 011959 326 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMF 404 (474)
Q Consensus 326 ~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~v~~~g~~~ 404 (474)
++++++++.+......... +.......+++++.+++.. .+..++..++.+++.+.|+++. ++.. ..+..+.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~ 292 (353)
T PLN02721 219 VGSKSFIRKAKRLRKTLGG-GMRQVGVLAAAALVALQEN--VPKLEDDHKKAKLLAEGLNQIK---GLRVNVAAVETNIV 292 (353)
T ss_pred ecCHHHHHhHHHHHHhcCC-CeehhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCC---CcEEecCCccceEE
Confidence 7888888776421111111 1111122233344444322 1123334455666777666531 2211 112345666
Q ss_pred EEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEe--cCCcHHHHHHHHHHHHHHHhhC
Q 011959 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
++.+.... ......+++.|.++||.+.+.+...+|++ +.++++++++++++|++++..+
T Consensus 293 ~~~~~~~~-----------~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (353)
T PLN02721 293 YFDITDGS-----------RITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAALTL 353 (353)
T ss_pred EEEccCCc-----------cccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhhcC
Confidence 77663210 01235789999999999999877777775 4679999999999999987643
No 204
>PLN02231 alanine transaminase
Probab=99.91 E-value=2.9e-22 Score=206.58 Aligned_cols=332 Identities=14% Similarity=0.152 Sum_probs=203.0
Q ss_pred CHHHHHHHHHHHHh--cC---CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHhHhh-cCCcEE
Q 011959 117 DDQVLAALGETMKK--GT---SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAF-TGRERI 184 (474)
Q Consensus 117 ~p~v~~a~~~~~~~--~~---~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al~~ar~~-~~~~~i 184 (474)
+.++++.+.+.+.. +. .|+ +..++++.+++++.++.+ ..++|++|+|+++|+..++++. . ..++.|
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l--~~~~gd~V 219 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--IRSEKDGI 219 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHh--ccCCCCEE
Confidence 45677777776664 21 122 245678888888877643 5789999999999999999942 2 246889
Q ss_pred EEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC---CCeEEEEEccccCCCCc
Q 011959 185 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSGF 261 (474)
Q Consensus 185 i~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~G~ 261 (474)
++..|+|.++. ..+...|..+..+++....++ . -|+++|++.+++.. .+++++++..++|++|.
T Consensus 220 li~~P~Y~~y~-~~~~~~g~~~v~~~l~~~~~~---------~---~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~ 286 (534)
T PLN02231 220 LCPIPQYPLYS-ASIALHGGTLVPYYLDEATGW---------G---LEISELKKQLEDARSKGITVRALVVINPGNPTGQ 286 (534)
T ss_pred EEeCCCChhHH-HHHHHcCCEEEEEecCcccCC---------C---CCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCc
Confidence 99999998754 333444443322211100000 0 17899999886421 14666665555778998
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc-CCCc-cccc----cCC---CCcee---ehhhhc-C-CCcceEEEE
Q 011959 262 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AYGG-AQEY----FGV---TPDLT---TLGKII-G-GGLPVGAYG 326 (474)
Q Consensus 262 i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~-g~~~-~~~~----~g~---~pdi~---t~sK~l-~-~G~~iG~~~ 326 (474)
+.+.++ +++|.++|++||++||+||+|..+ .. +..+ .... .|. ...++ +|||++ + +|+|+||++
T Consensus 287 vls~e~-l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~ 365 (534)
T PLN02231 287 VLAEEN-QRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 365 (534)
T ss_pred CCCHHH-HHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEE
Confidence 887666 999999999999999999999888 53 3222 1111 111 12244 799987 5 799999997
Q ss_pred e---cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhc--C----------CCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 327 G---RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--E----------PGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 327 ~---~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~--~----------~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
+ ++++++.+.+. .. .+.+.+.+++.++..+++--. + +.+.+.++++.+.+.+.|+++
T Consensus 366 ~~~~~~~l~~~l~k~---~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~---- 437 (534)
T PLN02231 366 VTGFTSDVREQIYKV---AS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL---- 437 (534)
T ss_pred EecCCHHHHHHHHHH---Hh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 5 68888887632 11 234556777777776663210 0 123345555566666655543
Q ss_pred CCeeEEeeeceeEEE-EEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccCC-------cceEEecCCcHHHHHH
Q 011959 392 GHAICGGYISGMFGF-FFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-------EAGFTSLAHSSDDIQH 462 (474)
Q Consensus 392 ~~~~~v~~~g~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~-------~~~~~~~~~t~e~i~~ 462 (474)
+.....++.|.|+.+ .+.-+. ................++..|+ +.||.+.|+.. .++|+++..+++++++
T Consensus 438 ~gi~~~~p~Ggfylw~~l~lp~-~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~e 516 (534)
T PLN02231 438 EGVTCNKAEGAMYLFPRIHLPQ-KAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPA 516 (534)
T ss_pred CCceecCCCeeeEEeccccCcH-HHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHH
Confidence 222334455555444 332100 0000000000000123556565 56999998731 2478888889999999
Q ss_pred HHHHHHHHHhh
Q 011959 463 TITAAEKVLRQ 473 (474)
Q Consensus 463 ~l~~l~~~~~~ 473 (474)
++++|.+++++
T Consensus 517 al~RL~~~~~~ 527 (534)
T PLN02231 517 IVSRLTEFHKS 527 (534)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 205
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=2.3e-22 Score=202.78 Aligned_cols=320 Identities=14% Similarity=0.128 Sum_probs=204.3
Q ss_pred CChhhccCCCCCHHHHHHHHHHHHhc-CCCC--------CCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHh
Q 011959 106 GSWGPAIIGHADDQVLAALGETMKKG-TSFG--------APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (474)
Q Consensus 106 ~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~--------~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~a 175 (474)
.+++....||++|++++++..+. .. +.|. +..+++.+++++++++++ +.+.+.++++|+++.+.++..+
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~ 101 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAA 101 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHH
Confidence 34444678999999988877766 32 1222 123567889999999885 3447888887887777777765
Q ss_pred HhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC-----CHHHHHHHHhcCCCCeEEE
Q 011959 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGEIAAI 250 (474)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~a~v 250 (474)
+...++++.|++...+|+.+...+...+... + .++..++++ |++++++.+. +++++|
T Consensus 102 ~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~---------g------~~~~~v~~~~~~~~d~~~l~~~i~---~~t~~v 163 (398)
T cd00613 102 IRAYHKRNKVLVPDSAHPTNPAVARTRGEPL---------G------IEVVEVPSDEGGTVDLEALKEEVS---EEVAAL 163 (398)
T ss_pred HhcccCCCEEEEcCccCcchHHHHHHhcccC---------C------cEEEEeccCCCCCcCHHHHHHhcC---CCeEEE
Confidence 5443234455566778888877776655210 0 012222221 6888888875 368899
Q ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee--ehhhhcC----CCcceE
Q 011959 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIG----GGLPVG 323 (474)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~----~G~~iG 323 (474)
++++++ ++|.+. +++++|+++|++||++||+|++|... .... ...+ .+|++ +++|.+. ||+++|
T Consensus 164 iv~~~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~~~~~---~~~~--~~d~~~~s~~K~~~p~g~Ggp~~g 234 (398)
T cd00613 164 MVQYPN-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLKP---PGEY--GADIVVGNLQKTGVPHGGGGPGAG 234 (398)
T ss_pred EEECCC-CCceec---chHHHHHHHHHhcCCEEEEEeccccccCCCC---hHHc--CCCEEEeeccccCCCCCCCCCcee
Confidence 998865 678774 34799999999999999999998522 1111 1122 36766 5788773 368899
Q ss_pred EEEecHHHHHhhcCCC-----------C---------------cccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHH
Q 011959 324 AYGGRRDIMEMVAPAG-----------P---------------MYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLN 374 (474)
Q Consensus 324 ~~~~~~~i~~~~~~~~-----------~---------------~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~ 374 (474)
+++.++++++.+.... . .....+++++++.++++.++++.+.+ +++.++++
T Consensus 235 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~ 314 (398)
T cd00613 235 FFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAH 314 (398)
T ss_pred EEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 9999988887653210 0 01123456677777777777776654 34567888
Q ss_pred HHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEeccc---CCcceEE
Q 011959 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---QFEAGFT 451 (474)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---~~~~~~~ 451 (474)
+++++++++|+++.... ... ......+.+.+.. .......++++.|+++||++... +...+|+
T Consensus 315 ~~~~~l~~~L~~~~~~~-~~~--~~~~~~v~~~~~~-----------~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRi 380 (398)
T cd00613 315 LNANYLAKRLKEVGGVL-PFN--GPFFHEFVLRLPP-----------LYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMI 380 (398)
T ss_pred HHHHHHHHHHHhcCCcc-cCC--CCeeEEEEEEcCC-----------cchHHHHHHHHhhhhcCccccccccCCCCeEEE
Confidence 88888888888753221 010 0111112333211 00123467889999999987653 3345665
Q ss_pred --ecCCcHHHHHHHHHHH
Q 011959 452 --SLAHSSDDIQHTITAA 467 (474)
Q Consensus 452 --~~~~t~e~i~~~l~~l 467 (474)
+..+|+||||+++++|
T Consensus 381 s~~~~~t~edid~~~~~L 398 (398)
T cd00613 381 EPTETETKEELDALLEAL 398 (398)
T ss_pred EcCCCCCHHHHHHHHHhC
Confidence 5788999999999864
No 206
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=3.3e-22 Score=197.80 Aligned_cols=314 Identities=18% Similarity=0.180 Sum_probs=201.2
Q ss_pred CCHHHHHHHHHHHHhc---CCC---CCCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEE
Q 011959 116 ADDQVLAALGETMKKG---TSF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 186 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~---~~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~ 186 (474)
.+|.+++++.+ .... ..+ ....+++..+++.+...++ ..+.+++++||++++..+++.. ...+++|++
T Consensus 12 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~--~~~g~~vl~ 88 (350)
T cd00609 12 PPPEVLEALAA-AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRAL--LNPGDEVLV 88 (350)
T ss_pred CCHHHHHHHHH-HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh--CCCCCEEEE
Confidence 46666666554 1111 111 2345677788888877653 3678999999999999999853 234577777
Q ss_pred EeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCH
Q 011959 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (474)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (474)
.+++|++.. ..+...+..+..++....... ..+.+.+++.. .+++++|+++++++++|.+.+.+
T Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~~~---~~~~~~v~i~~~~~~tG~~~~~~ 152 (350)
T cd00609 89 PDPTYPGYE-AAARLAGAEVVPVPLDEEGGF------------LLDLELLEAAK---TPKTKLLYLNNPNNPTGAVLSEE 152 (350)
T ss_pred cCCCchhHH-HHHHHCCCEEEEEecccccCC------------ccCHHHHHhhc---CccceEEEEECCCCCCCcccCHH
Confidence 777776643 333333322211111100000 00113444433 24789999999888899877644
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc----cccccCCCCceeehhhhcC-CCcceEEEEecH-HHHHhhcCCC
Q 011959 267 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGG----AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRR-DIMEMVAPAG 339 (474)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~----~~~~~g~~pdi~t~sK~l~-~G~~iG~~~~~~-~i~~~~~~~~ 339 (474)
.+.+|.++|++||+++|+||+|+++ ..+... .....+....+.+++|.++ +|+++|++++++ ++++.+..
T Consensus 153 -~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~-- 229 (350)
T cd00609 153 -ELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKK-- 229 (350)
T ss_pred -HHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHH--
Confidence 4999999999999999999999877 443321 1111222222347999999 889999999999 78888863
Q ss_pred CcccccCCCCChHHHHHHHHHHHHhc-C-CCHHHHHHHHHHHHHHHHHHHhhhcCCee-EEeeeceeEEEEEecCCCcCc
Q 011959 340 PMYQAGTLSGNPLAMTAGIHTLKRLK-E-PGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNF 416 (474)
Q Consensus 340 ~~~~~~t~~~~~~~~aaa~aal~~~~-~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~v~~~g~~~~i~~~~~~~~~~ 416 (474)
.....+++.+..++.++..+|+... . +...++++++.+++++.|++.. ... .....|.++++.+...
T Consensus 230 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~g~~~~~~~~~~----- 299 (350)
T cd00609 230 -LLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELG----PLVVVKPSGGFFLWLDLPEG----- 299 (350)
T ss_pred -HHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcC----CccccCCCccEEEEEecCCC-----
Confidence 2233456778888888888887652 1 4455666666666766666542 221 3445677777766321
Q ss_pred ccccccchHHHHHHHHHHHHCCeEeccc------CCcceEEecCCcHHHHHHHHHHHHH
Q 011959 417 EDAKKSETTKFARFYRGMLEEGVYFAPS------QFEAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 417 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~------~~~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
.....+.+.|.++||.+.+. ....+|+++...++|+++++++|++
T Consensus 300 --------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~~ 350 (350)
T cd00609 300 --------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLAE 350 (350)
T ss_pred --------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhhC
Confidence 11245666777889999876 3346788665559999999998863
No 207
>PLN02397 aspartate transaminase
Probab=99.91 E-value=7.5e-22 Score=199.64 Aligned_cols=297 Identities=16% Similarity=0.113 Sum_probs=175.6
Q ss_pred CHHHHHHHHHHHhhCCC---CCeEEE--eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-
Q 011959 138 CLLENVLAEMVISAVPS---IEMVRF--VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL- 211 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~---~~~v~~--~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~- 211 (474)
.++++++++++.+.... .+.|.. +.+|+.+....+.+...+.+++.|++.+|+|.++. ..+...|..+..+++
T Consensus 94 ~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~-~~~~~~g~~~~~v~l~ 172 (423)
T PLN02397 94 AEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHH-NIFRDAGVPVRTYRYY 172 (423)
T ss_pred HHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHH-HHHHHcCCeEEEeecc
Confidence 46667777766544321 133321 33444443333333223446788999999987754 333344443322211
Q ss_pred C-CCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011959 212 P-DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (474)
Q Consensus 212 ~-~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (474)
+ ...+ .|++.+++.++...+++.++++...+|++|.+.+.++ +++|.++|++||++||+||+|.
T Consensus 173 ~~~~~~--------------~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~-l~~i~~~a~~~~~~vI~De~Y~ 237 (423)
T PLN02397 173 DPKTRG--------------LDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQ-WEQISDLIKSKNHLPFFDSAYQ 237 (423)
T ss_pred cCcCCc--------------cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhCCcEEEEecccC
Confidence 0 0011 1788888877654345677777778888998887665 9999999999999999999999
Q ss_pred Cc-ccCC--C-cccccc-CCCCcee---ehhhhcC-CCcceEEEE---ecHHHHHhhcC-CCCcccccCCCCChHHHHHH
Q 011959 291 GF-RLAY--G-GAQEYF-GVTPDLT---TLGKIIG-GGLPVGAYG---GRRDIMEMVAP-AGPMYQAGTLSGNPLAMTAG 357 (474)
Q Consensus 291 g~-r~g~--~-~~~~~~-g~~pdi~---t~sK~l~-~G~~iG~~~---~~~~i~~~~~~-~~~~~~~~t~~~~~~~~aaa 357 (474)
+| ..+. . .....+ ....+++ +|||+++ .|||+||++ .++++++.+.. ..........+.+.+++.++
T Consensus 238 ~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 317 (423)
T PLN02397 238 GFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIV 317 (423)
T ss_pred CccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHH
Confidence 88 4321 1 111111 1112233 7999999 799999984 35665443221 00111122334566777777
Q ss_pred HHHHHHhc-------C-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHH
Q 011959 358 IHTLKRLK-------E-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 429 (474)
Q Consensus 358 ~aal~~~~-------~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 429 (474)
.++|+.-. . +++++.++++++.+.+.|+++....++....+..|.++|+.+. .+
T Consensus 318 ~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~------------------~~ 379 (423)
T PLN02397 318 ATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLN------------------KE 379 (423)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCC------------------HH
Confidence 76664210 0 2344566666677777776652111122223444555555441 24
Q ss_pred HHHHHH-HCCeEecccCCcceEEecC-CcHHHHHHHHHHHHHHHh
Q 011959 430 FYRGML-EEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 430 ~~~~l~-~~Gv~v~~~~~~~~~~~~~-~t~e~i~~~l~~l~~~~~ 472 (474)
+++.|+ ++||++.+.+ |++++ .+++.+++++++|++++.
T Consensus 380 ~~~~Ll~~~~V~v~~~~----Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 380 QVDRMTKEYHIYMTRDG----RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHhCCEEECCCC----eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 667776 5699997543 88775 899999999999999875
No 208
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.90 E-value=4.8e-22 Score=196.03 Aligned_cols=319 Identities=19% Similarity=0.155 Sum_probs=199.7
Q ss_pred eccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCc
Q 011959 103 DYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 182 (474)
Q Consensus 103 D~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~ 182 (474)
||.+. +++| .+|.+++++.+.+.... ..++.....++.+.++++++ .+.++++++|++|+..+++.. ..+++
T Consensus 1 ~~~~~---~~~~-~~~~v~~a~~~~~~~~~-~~~~~~~~~~l~~~~a~~~g-~~~~~~~~~gt~a~~~~~~~l--~~~gd 72 (338)
T cd06502 1 DFRSD---TVTG-PTPEMLEAMAAANVGDD-VYGEDPTTAKLEARAAELFG-KEAALFVPSGTAANQLALAAH--TQPGG 72 (338)
T ss_pred Ccccc---cCCC-CCHHHHHHHHhcccCCc-ccCCCHHHHHHHHHHHHHhC-CCeEEEecCchHHHHHHHHHh--cCCCC
Confidence 67777 8888 88999999988654322 22456778899999999885 678999999999999999842 33445
Q ss_pred EEEEEeCCCCCCch-h--HHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC----CCeEEEEEccc
Q 011959 183 RIIKFEGCYHGHAD-P--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK----GEIAAIILEPV 255 (474)
Q Consensus 183 ~ii~~~~~yhg~~~-~--~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~----~~~a~vi~ep~ 255 (474)
.|++. ..+|.... . .....|..+..++. ..+ ..|+++++++++++. +++++|+++++
T Consensus 73 ~v~~~-~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~-------------~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 73 SVICH-ETAHIYTDEAGAPEFLSGVKLLPVPG--ENG-------------KLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred eEEEe-cCcceeeecCCcHHHHcCceEEeecC--CCC-------------cCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 56654 44444322 1 11223332222111 000 128999999987521 25677777766
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc---ccCCCccccccCCCCcee--ehhhhcCCCcceEEE-EecH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRR 329 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~---r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~-~~~~ 329 (474)
+|+| .+.+ .+.+++|.++|++||++||+||+|..+ ..+. ....+...+|++ +++|+++. +.|++ ++++
T Consensus 137 ~n~g-~~~~-~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~--~~g~~~~~~~ 210 (338)
T cd06502 137 TEGG-TVYP-LDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA--PVGAVVVGNR 210 (338)
T ss_pred cCCc-cccC-HHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC--ccceEEECCH
Confidence 6654 4444 444999999999999999999998422 1121 112222245554 78999973 33554 6788
Q ss_pred HHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEe
Q 011959 330 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (474)
Q Consensus 330 ~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (474)
++++.+..... ..+++++.+++.+++++++|+.-...+..+++.++.+++.+.|+++. .. .....+.++.+.+.
T Consensus 211 ~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~-~~~~~~~~~~v~~~ 284 (338)
T cd06502 211 DFIARARRRRK-QAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELG----GL-ESEVQTNIVLLDPV 284 (338)
T ss_pred HHHHHHHHHHH-HhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC----CC-cccccCCeEEEecC
Confidence 88888763211 12245566777888887777531113445677777778888777642 21 11234455555432
Q ss_pred cCCCcCcccccccchHHHHHHHHHHH---HCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHH
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGML---EEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~ 469 (474)
. .......+.+.+. ++|+++.+.+...+|+ ++.+|++|++++++++++
T Consensus 285 ~------------~~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 285 E------------ANAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred C------------ccHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 1 1122334444443 7899998775566776 466799999999999875
No 209
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=4.5e-22 Score=197.69 Aligned_cols=285 Identities=12% Similarity=0.108 Sum_probs=183.4
Q ss_pred HHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcC-C-cEEEEEeCCCCCCchhHHHhcCCCCccCCCC-CCCC
Q 011959 141 ENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG-R-ERIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSPG 216 (474)
Q Consensus 141 ~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~-~-~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~-~~~g 216 (474)
..+|.+.++++++ ..++|++++|+++++..+++ .+.. + +.|++.+++| +.........|..+..++.. ...+
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~---~~~~~g~~~vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~ 136 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVR---ALCVPGRDAVLVTPPVF-GMYAVCARLQNAPLVEVPLVDGADG 136 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHH---HhcCCCCCeEEEcCCCh-HHHHHHHHHcCCEEEEEecCCCccC
Confidence 4667777777765 57899999999999999998 4433 3 5677666665 33333333444433322211 0111
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA 295 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g 295 (474)
+. .|++++++.+.. +++++|++..++|++|.+.+.++ +++|.++|+ ++++||+||+|..| ...
T Consensus 137 ~~------------~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~-~~~l~~~~~-~~~~iI~Deay~~f~~~~ 200 (364)
T PRK04781 137 FH------------ADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQ-IERALQALQ-GKALVVVDEAYGEFSDVP 200 (364)
T ss_pred CC------------cCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHH-HHHHHHhCC-CCcEEEEeCcchhhcCCc
Confidence 10 167776554432 25677777777788999998555 666766664 47999999999888 321
Q ss_pred CCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhc--C-CC
Q 011959 296 YGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--E-PG 368 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~--~-~~ 368 (474)
.. ....+..++++ ||||++| +|+|+||+++++++++.+.+. ...++.+.+++.++.++|+.-. . .+
T Consensus 201 ~~--~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~-----~~~~~~~~~~~~~a~~~l~~~~~~~~~~ 273 (364)
T PRK04781 201 SA--VGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRC-----QAPYPVPTPCAALAEQALSAPALAVTAR 273 (364)
T ss_pred ch--HHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhc-----cCCCCCCHHHHHHHHHHHhcccHHHHHH
Confidence 11 11222334444 7999999 899999999999999988742 2346678888888887775311 0 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC---
Q 011959 369 TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--- 445 (474)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--- 445 (474)
..+.++++++.+.+.|+++ . ++....+..|+++++.+.+ ..++.+.|.++||.+.++.
T Consensus 274 ~~~~~~~~r~~l~~~L~~~-~--~~~~~~p~~g~f~~~~~~~----------------~~~~~~~l~~~gI~v~~~~~~~ 334 (364)
T PRK04781 274 RVAEVRAERERLHAALAQL-P--GVRRVYPSQGNFLLVRFDD----------------AEAAFQALLAAGVVVRDQRAAP 334 (364)
T ss_pred HHHHHHHHHHHHHHHHHhC-C--CCCeECCCCCcEEEEEcCC----------------HHHHHHHHHHCCeEEeeCCCCC
Confidence 2333444445555555432 0 2222346678888887631 1467888899999998863
Q ss_pred --CcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 446 --FEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 446 --~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.+++|+++. +.++.++++++|+++..
T Consensus 335 ~~~~~~Ris~~-~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 335 RLSDALRITLG-TPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCCCeEEEeCC-CHHHHHHHHHHHHHHHh
Confidence 235677765 67899999999988654
No 210
>PRK10534 L-threonine aldolase; Provisional
Probab=99.90 E-value=9.4e-22 Score=193.47 Aligned_cols=320 Identities=17% Similarity=0.139 Sum_probs=196.0
Q ss_pred EEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcC
Q 011959 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 180 (474)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~ 180 (474)
+|||.++ .+-| .+|.+++++.+.......| ++.....+|.+.+++++ +.+.+++++||++++..++.. ....
T Consensus 1 ~~~~~~~---~~~~-p~~~~~~a~~~~~~~~~~Y-~~~~~~~~L~~~la~~~-g~~~~~v~~~g~~a~~~~l~~--~~~~ 72 (333)
T PRK10534 1 MIDLRSD---TVTR-PSRAMLEAMMAAPVGDDVY-GDDPTVNALQDYAAELS-GKEAALFLPTGTQANLVALLS--HCER 72 (333)
T ss_pred Ccccccc---cCCC-CCHHHHHHHHhccCCCccc-CCCHHHHHHHHHHHHHh-CCCeEEEeCchHHHHHHHHHH--hcCC
Confidence 3789988 5555 8899999998755443322 36777889999999888 566678999999999888874 2334
Q ss_pred CcEEEEEeCCCCCCchh-HHHhcC-CCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC---CCeEEEEEccc
Q 011959 181 RERIIKFEGCYHGHADP-FLVKAG-SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPV 255 (474)
Q Consensus 181 ~~~ii~~~~~yhg~~~~-~~~~~g-~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~ 255 (474)
+++|++..++|...... .....+ ..... .+.... + ..|+++|++.+..+. .++++|+++.+
T Consensus 73 gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----------~-~~d~~~l~~~i~~~~~~~~~~~lv~l~np 138 (333)
T PRK10534 73 GEEYIVGQAAHNYLYEAGGAAVLGSIQPQP--IDAAAD-----------G-TLPLDKVAAKIKPDDIHFARTRLLSLENT 138 (333)
T ss_pred CCeeEEechhhhhHhcCCchHHhcCceEEe--ecCCCC-----------C-CCCHHHHHHhhcccCcCcccceEEEEecC
Confidence 56677655544221111 011111 11111 010000 0 117899988885321 13566776643
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCC-CccccccCCCCc--eeehhhhcCCCcceE-EEEecHH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPD--LTTLGKIIGGGLPVG-AYGGRRD 330 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pd--i~t~sK~l~~G~~iG-~~~~~~~ 330 (474)
+ +|.+.+.++ +++|.++|++||++||+||+|. | .... ...........| +++|||+++. ++| |++++++
T Consensus 139 ~--~G~v~~~~~-l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~--~~G~~~~~~~~ 212 (333)
T PRK10534 139 H--NGKVLPREY-LKQAWEFTRERNLALHVDGARI-FNAVVAYGCELKEITQYCDSFTICLSKGLGT--PVGSLLVGNRD 212 (333)
T ss_pred C--CCeecCHHH-HHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCHHHHHhcCCEEEEEeEcCCCC--cccceEEcCHH
Confidence 2 488887666 8999999999999999999986 3 2110 001111111123 4589998863 588 5788999
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEec
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (474)
+++.+...... ....++.+.++++++.++|+.. .+.+++..+.++++.+.|+++ ++. ..++.++|+++.+..
T Consensus 213 ~i~~~~~~~~~-~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~~----g~~-~~~~~~nfv~~~~~~ 284 (333)
T PRK10534 213 YIKRARRWRKM-TGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLREA----GAD-VMRQDTNMLFVRVGE 284 (333)
T ss_pred HHHHHHHHHHH-hCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhC----CCc-cCCCCceEEEEECCc
Confidence 99888631111 1112233456677777777532 233344444556777777664 322 123457777766531
Q ss_pred CCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHHh
Q 011959 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.....+.+.|.++||++.++. .+++ ++.+|+|++++++++|++++.
T Consensus 285 --------------~~~~~~~~~l~~~gi~v~~~~--~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 285 --------------EQAAALGEYMRERNVLINASP--IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred --------------hhHHHHHHHHHHcCeeecCCc--eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 112567888999999998864 3455 345899999999999998764
No 211
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3e-22 Score=203.75 Aligned_cols=335 Identities=16% Similarity=0.129 Sum_probs=189.5
Q ss_pred CCCC-CHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhh-C-C---C--CCeEEEeCCHHHHHHHHHHHhH---hh
Q 011959 113 IGHA-DDQVLAALGETMKKGTSFG---APCLLENVLAEMVISA-V-P---S--IEMVRFVNSGTEACMGVLRLAR---AF 178 (474)
Q Consensus 113 lG~~-~p~v~~a~~~~~~~~~~~~---~~~~~~~~la~~l~~~-~-~---~--~~~v~~~~sGseA~~~al~~ar---~~ 178 (474)
.+.. ++.|.+ +.+.+. +..|. +..++++++++.+.+. . . . .++|++|+|+++|+..++.... ..
T Consensus 110 p~~~~~~~v~e-~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll 187 (527)
T PRK09275 110 LGFDADEFVYE-LVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLL 187 (527)
T ss_pred CCCCCCHHHHH-HHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcC
Confidence 3444 445556 555553 33343 2346677777755432 1 1 1 3489999999999999987321 24
Q ss_pred cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCC--CCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcccc
Q 011959 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD--SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (474)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~--~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (474)
..+++|++.+|+|..+.... ...+.+...+.++. ..++ . -|++++++++. +++++|+++.++
T Consensus 188 ~pGD~Vlv~~P~y~~Y~~~~-~l~g~~~~~v~v~~~~~~~f-----------~-~d~~~l~~~~~---~~tkai~l~nP~ 251 (527)
T PRK09275 188 KAGDKIALMTPIFTPYLEIP-ELPRYDLEVVHINADEENEW-----------Q-YPDSELEKLRD---PSIKALFLVNPS 251 (527)
T ss_pred CCCCEEEEeCCChHHHHHHH-HHcCCCeEEEEeecCcccCC-----------C-CCHHHHHhhcC---CCCCEEEEeCCc
Confidence 56789999999998854332 23332221111111 0111 0 16888888765 356777776667
Q ss_pred CCCCcccCCHHHHHHHHHHHHH--hCCEEEEeccccCcccCCCccccccCCCC-ce---eehhhhcC-CCcceEEEEecH
Q 011959 257 GNSGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGFRLAYGGAQEYFGVTP-DL---TTLGKIIG-GGLPVGAYGGRR 329 (474)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~--~g~llI~DEv~~g~r~g~~~~~~~~g~~p-di---~t~sK~l~-~G~~iG~~~~~~ 329 (474)
|++|.+.+.++ +++|.++|++ +|++||+||+|..|....... ....| .+ .+|||.++ +|||+||+++++
T Consensus 252 NPTG~v~s~e~-l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~---~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~ 327 (527)
T PRK09275 252 NPPSVAMSDES-LEKIADIVNEKRPDLMIITDDVYGTFVDDFRSL---FAVLPYNTILVYSFSKYFGATGWRLGVIALHE 327 (527)
T ss_pred CCcCCCCCHHH-HHHHHHHHHhcCCCcEEEECCCChhhcccccCH---HHhCCCCEEEEeehhhhccCcHhHHhhhhcCc
Confidence 88898887665 9999999965 499999999998772111111 11123 22 37999998 899999999987
Q ss_pred H-----HHHhh-----------------------------cCCCCcccccCCCCChHHHHH-HHHHH-HHhcC-CCHHHH
Q 011959 330 D-----IMEMV-----------------------------APAGPMYQAGTLSGNPLAMTA-GIHTL-KRLKE-PGTYEY 372 (474)
Q Consensus 330 ~-----i~~~~-----------------------------~~~~~~~~~~t~~~~~~~~aa-a~aal-~~~~~-~~~~~~ 372 (474)
+ +++.+ .....+....|.+.+.+.|.+ ++.++ ..++. +.+.+.
T Consensus 328 ~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~ 407 (527)
T PRK09275 328 DNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKA 407 (527)
T ss_pred hhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHH
Confidence 6 33322 000122334566777777665 32111 11222 222222
Q ss_pred HHHHHHHHHHHHHHHhhhcCCee--EEeeeceeEEEEEecCC----CcCcccccccchHHHHHHHHHHH-HCCeEecccC
Q 011959 373 LNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGP----VYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ 445 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~--~v~~~g~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~ 445 (474)
+.+.++++...+....+... ..+..+.++++++..-. ...+...... .....+|+..|+ +.||.+.|+.
T Consensus 408 ---~~~~~~~Rr~~l~~~Lg~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~-~~~~~~f~~~Ll~e~gV~v~PG~ 483 (527)
T PRK09275 408 ---MKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKK-NYSPVDLLFRLAEETGVVLLPGG 483 (527)
T ss_pred ---HHHHHHHHHHHHHHHcCCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhc-cCCHHHHHHHHHhcCCEEEeCch
Confidence 22223222222222223221 22344555555553210 0011110000 001245666666 5699998873
Q ss_pred -----CcceEEecC-CcHHHHHHHHHHHHHHHhh
Q 011959 446 -----FEAGFTSLA-HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 446 -----~~~~~~~~~-~t~e~i~~~l~~l~~~~~~ 473 (474)
.+++|++++ .+++++.++.++|.+++++
T Consensus 484 ~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 484 GFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred hhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 236899987 6889999999999998864
No 212
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=8.6e-22 Score=195.18 Aligned_cols=309 Identities=14% Similarity=0.126 Sum_probs=191.4
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 176 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar 176 (474)
+...+|+..|- +++|.. +.+ .+.....| +.....+|.+.++++++ ..++|++++|+++++..+++.
T Consensus 30 ~~~~~~l~~ne--~~~~~~-~~~------~~~~~~~Y--p~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~-- 96 (354)
T PRK04635 30 GRGDIWINANE--SPFNNE-YKL------DLARLNRY--PECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRA-- 96 (354)
T ss_pred CCCcEEeeCCC--CCCCCC-hhh------hhHHhccC--CCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHH--
Confidence 34557877775 555533 322 11122223 33335777777877776 678999999999999999984
Q ss_pred hhc-CC-cEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcc
Q 011959 177 AFT-GR-ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 254 (474)
Q Consensus 177 ~~~-~~-~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep 254 (474)
+. .+ +.|++.+++|..+.. .....|..+..++...... -|++.+++ + +++++|+++.
T Consensus 97 -~~~~g~d~vlv~~P~y~~y~~-~~~~~g~~v~~v~~~~~~~--------------~~~~~l~~-~----~~~~li~i~n 155 (354)
T PRK04635 97 -FCEPGQDSIACFGPTYGMYAI-SAETFNVGVKALPLTADYQ--------------LPLDYIEQ-L----DGAKLVFICN 155 (354)
T ss_pred -hcCCCCCeEEEcCCChHHHHH-HHHHcCCEEEEEecCCCCC--------------CCHHHHHh-c----cCCCEEEEeC
Confidence 43 33 678988888876433 2333444333221110000 15676653 2 2567777777
Q ss_pred ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHH
Q 011959 255 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRD 330 (474)
Q Consensus 255 ~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~ 330 (474)
++|++|.+.+.++ +++|.+.|+ +++||+||+|..|.... .........++++ ||||.++ +|+|+||++++++
T Consensus 156 P~NPTG~~~~~~~-l~~l~~~~~--~~~vivDeay~~~~~~~-s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~ 231 (354)
T PRK04635 156 PNNPTGTVIDRAD-IEQLIEMTP--DAIVVVDEAYIEFCPEY-SVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEE 231 (354)
T ss_pred CCCCCCccCCHHH-HHHHHHhCC--CcEEEEeCchHhhccCc-chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHH
Confidence 7888999998444 555555544 59999999998773211 1111112224433 7999999 8999999999999
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhc--C-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEE
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--E-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~--~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (474)
+++.+... ...++.+.+.+.++.++|+... . .+..+.++++++.+.+.|++ ++.....++.|.++++.
T Consensus 232 ~~~~l~~~-----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~g~f~~~~ 302 (354)
T PRK04635 232 LIEILMRV-----IAPYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSM----YGGAKVLEGNGNYVLAK 302 (354)
T ss_pred HHHHHHhh-----cCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh----CCCceECCCCCcEEEEE
Confidence 99887631 1245667777777777775210 0 12233344445555555544 33122234567777776
Q ss_pred EecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHH
Q 011959 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
+.+ ..++.+.|.++||.+.... .+.+|+++. +++++++++++|++-
T Consensus 303 ~~~----------------~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~-~~e~~~~l~~al~~~ 352 (354)
T PRK04635 303 FDD----------------VDAVFKALWDAGIVARAYKDPRLANCIRFSFS-NRAETDKLIGLIRNQ 352 (354)
T ss_pred CCC----------------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHh
Confidence 531 1467788889999987653 245788864 789999999999763
No 213
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.89 E-value=5.9e-21 Score=190.70 Aligned_cols=314 Identities=18% Similarity=0.150 Sum_probs=198.7
Q ss_pred CCCCHHHHHHHHHHHHhcC--C--CCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhc--CCcEEEE
Q 011959 114 GHADDQVLAALGETMKKGT--S--FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT--GRERIIK 186 (474)
Q Consensus 114 G~~~p~v~~a~~~~~~~~~--~--~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~--~~~~ii~ 186 (474)
.+.+|.+++++.+++.... . +........++++++++.++ ..+.+++++||++|+..+++.++... ++++||+
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~ 109 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVV 109 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEe
Confidence 3478999999999887521 1 11123444788999999886 34468899999999999998765542 3567877
Q ss_pred EeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCH
Q 011959 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (474)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (474)
.+..+..+ .......|..+..++... .+ ..|+++|++.++. ++++|++...++++|.+.|
T Consensus 110 ~~~~h~s~-~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~-- 169 (371)
T PRK13520 110 PESAHFSF-DKAADMLGVELRRAPLDD-DY-------------RVDVKAVEDLIDD---NTIGIVGIAGTTELGQVDP-- 169 (371)
T ss_pred cCcchHHH-HHHHHHcCceEEEecCCC-CC-------------cCCHHHHHHHHhh---CCEEEEEEcCCcCCcccCC--
Confidence 77655442 222223333222211110 00 1279999999974 3455554445567899998
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-c-cCCC---ccccccCCCCceee--hhhhcCCCcceEEEEe-cHHHHHhhcCC
Q 011959 267 DFLNAIRRITKENGALLIFDEVMTGF-R-LAYG---GAQEYFGVTPDLTT--LGKIIGGGLPVGAYGG-RRDIMEMVAPA 338 (474)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r-~g~~---~~~~~~g~~pdi~t--~sK~l~~G~~iG~~~~-~~~i~~~~~~~ 338 (474)
+++|.++|++||+++|+||+|+++ . .... +..... ..|.++ ..|...+|+|+|+++. ++++++.+...
T Consensus 170 --l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~--~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~ 245 (371)
T PRK13520 170 --IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP--GVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVD 245 (371)
T ss_pred --HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCC--CCceEEECCccccCccCCceEEEEcCHHHHHhhccc
Confidence 999999999999999999999765 2 1111 111112 235444 3464446789998864 66677766421
Q ss_pred CCcc-------cccCCCCChHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEE
Q 011959 339 GPMY-------QAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (474)
Q Consensus 339 ~~~~-------~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (474)
.+.. ..+|. ++..++++.++|+.+.++ +..++..++.+++++.|+++ ++.........++.+.+
T Consensus 246 ~~~~~~~~~~~~~gt~--~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v~~~~ 319 (371)
T PRK13520 246 TPYLTSKKQATLTGTR--SGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER----GFEPVIEPVLNIVAFDD 319 (371)
T ss_pred CccccCCCCcceEeec--cChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCceEEEEec
Confidence 1111 11222 345577778888876543 36677777777777777654 32211223344555443
Q ss_pred ecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-cceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
. ...++.+.|.++||.+.+... ..+|++ ..+|++|++++++.|++++++
T Consensus 320 ~----------------~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 320 P----------------NPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred C----------------CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhhC
Confidence 2 125788899999999987643 346764 457999999999999988753
No 214
>PRK08637 hypothetical protein; Provisional
Probab=99.89 E-value=6e-21 Score=191.49 Aligned_cols=304 Identities=13% Similarity=0.095 Sum_probs=191.8
Q ss_pred CCHHHHHHHHHHHhhCC--C---CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCC
Q 011959 137 PCLLENVLAEMVISAVP--S---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 211 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~--~---~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~ 211 (474)
..+++..+++++.+..+ . .+++++|+|+++++..+++. ....++.|++.+|+|..+........|..+..++.
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~--l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~ 123 (388)
T PRK08637 46 IPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADL--FVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPI 123 (388)
T ss_pred CHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHH--hcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecc
Confidence 34666777777665432 1 25789999999999999884 22346788888999877654333344554433222
Q ss_pred C-CCCCCCCCCCCceEEccCCCHHHHHHHHhc-CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHH-----hCCEEE
Q 011959 212 P-DSPGVPKGATYETLTAPFNDVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-----NGALLI 284 (474)
Q Consensus 212 ~-~~~g~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~-----~g~llI 284 (474)
. ...++ |++++++.++. ..+...++++..++|++|.+.+.++ +++|.++|++ |+++||
T Consensus 124 ~~~~~~~--------------d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~-~~~l~~~~~~~~~~~~~~~iI 188 (388)
T PRK08637 124 FDEDGGF--------------DTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKE-ATAIVEAIKELADAGTKVVAV 188 (388)
T ss_pred cCCCCcC--------------CHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHH-HHHHHHHHHHHHhcCCcEEEE
Confidence 1 11122 78999888862 1123445555556788998887666 9999999886 999999
Q ss_pred EeccccCc-ccCCCcc--c-cccCCCCce--e---ehhhhcC-CCcceEEEEe------cHHHHHhhcCCC-CcccccCC
Q 011959 285 FDEVMTGF-RLAYGGA--Q-EYFGVTPDL--T---TLGKIIG-GGLPVGAYGG------RRDIMEMVAPAG-PMYQAGTL 347 (474)
Q Consensus 285 ~DEv~~g~-r~g~~~~--~-~~~g~~pdi--~---t~sK~l~-~G~~iG~~~~------~~~i~~~~~~~~-~~~~~~t~ 347 (474)
+||+|.+| ..+.... . ...+...++ + ++||.++ +|+|+||++. ++++++.+.... .......+
T Consensus 189 ~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 268 (388)
T PRK08637 189 VDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNIS 268 (388)
T ss_pred ecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccC
Confidence 99999988 5543211 1 112223342 2 6999877 7999999974 367777664210 01111234
Q ss_pred CCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH---HHHhhhc----CCeeEEeeeceeEEEEEecCCCcCccccc
Q 011959 348 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI---IDAGKKA----GHAICGGYISGMFGFFFTEGPVYNFEDAK 420 (474)
Q Consensus 348 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L---~~~~~~~----~~~~~v~~~g~~~~i~~~~~~~~~~~~~~ 420 (474)
+.|.+++.++.+.|+ ++.+.+++++....++++. .+.+..+ ++....+..|.++|+.+..
T Consensus 269 ~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~---------- 335 (388)
T PRK08637 269 NGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG---------- 335 (388)
T ss_pred CCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh----------
Confidence 678889998888774 3344444444443343332 2222222 1222223456677776631
Q ss_pred ccchHHHHHHHHHHH-HCCeEecccCCcceEEecC-CcHHHHHHHHHHHHHHHhhC
Q 011959 421 KSETTKFARFYRGML-EEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 421 ~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~-~t~e~i~~~l~~l~~~~~~~ 474 (474)
....++.+.|+ ++||.+.+.+...+|+++. .+++++++++++|.++++.+
T Consensus 336 ----~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 336 ----VDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ----HHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 12357888886 5799887665567888764 58999999999999998764
No 215
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.89 E-value=1.3e-20 Score=188.77 Aligned_cols=332 Identities=12% Similarity=0.057 Sum_probs=202.5
Q ss_pred ccCCCCCHHHHHHHHHHHHhcCC--C---C---CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCc
Q 011959 111 AIIGHADDQVLAALGETMKKGTS--F---G---APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 182 (474)
Q Consensus 111 ~~lG~~~p~v~~a~~~~~~~~~~--~---~---~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~ 182 (474)
.-+|..++.+++|+.+....... . . ...+...++.+.+++++ +.+.++|++||++|+..+++.. ..+++
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~-g~~~~~~~~g~t~a~~~al~~l--~~~gd 103 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL-GMDEARVTHGAREGKFAVMHSL--CKKGD 103 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHh--cCCCC
Confidence 45777899999999998743111 0 1 12345688888888888 5678999999999999999842 23455
Q ss_pred EEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC----CCCeEEEEEccccCC
Q 011959 183 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN----KGEIAAIILEPVVGN 258 (474)
Q Consensus 183 ~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~----~~~~a~vi~ep~~~~ 258 (474)
+|++...++.+ ....+...|..+..++....++. ..|++++++.++++ .+++++|+++.++++
T Consensus 104 ~Vlv~~~~h~s-~~~~~~~~G~~~~~v~~~~~~~~------------~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~ 170 (387)
T PRK09331 104 YVVLDGLAHYT-SYVAAERAGLNVREVPKTGYPEY------------KITPEAYAEKIEEVKEETGKPPALALLTHVDGN 170 (387)
T ss_pred EEEECCCchHH-HHHHHHHcCCEEEEEeCccCcCC------------CcCHHHHHHHHHHhhhccCCCCEEEEEECCCCC
Confidence 66665444433 33334444443322211000000 12799999988743 236788999888888
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcC
Q 011959 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 337 (474)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~ 337 (474)
+|.+.+ +++|.++|++||++||+|++|+ |.. ......+|+...+.+++|+++++.++|++++++++++.+..
T Consensus 171 tG~~~~----l~~I~~la~~~g~~livD~a~~~g~~---~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~ 243 (387)
T PRK09331 171 YGNLAD----AKKVAKVAHEYGIPFLLNGAYTVGRM---PVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFR 243 (387)
T ss_pred Cccccc----HHHHHHHHHHcCCEEEEECCcccCCc---CCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhccc
Confidence 999988 9999999999999999999995 210 11222345443445789999977799999999998888754
Q ss_pred CCCcccc-----cCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEE--eeeceeEEEEEe
Q 011959 338 AGPMYQA-----GTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICG--GYISGMFGFFFT 409 (474)
Q Consensus 338 ~~~~~~~-----~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v--~~~g~~~~i~~~ 409 (474)
..+.+.. ...+.++....+++++++.+.+ .+.+++..++.+++++.|.++. ++.... .....+..++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~---g~~~~~~~~~~~~i~~~~~~ 320 (387)
T PRK09331 244 TSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIE---GFKQLGEKPRNHDLMKFETP 320 (387)
T ss_pred ccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CEEEeccCcCcCCeEEEeCC
Confidence 3221110 0111233344555566655443 2344555667777777776641 111110 112223323221
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCc-ceEE-ecCCcHHHHHHHHHHHHHHHhh
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE-AGFT-SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~~-~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
. . .............+.+.|.++||+..+.+.. .+++ +..+|++++++++++|++++++
T Consensus 321 ~--~---~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 321 S--F---DEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred c--h---hHHhhhccccchhHHHHHHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 0 0 0000001112356888999999985433333 3444 4568999999999999998765
No 216
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.89 E-value=4.5e-20 Score=186.00 Aligned_cols=327 Identities=15% Similarity=0.151 Sum_probs=203.4
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CC-CCCC------CHHHHHHHHHHHhhCC-C-CCeEEEeCCHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TS-FGAP------CLLENVLAEMVISAVP-S-IEMVRFVNSGTE 166 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~-~~~~------~~~~~~la~~l~~~~~-~-~~~v~~~~sGse 166 (474)
+..|+|..+. |..++.|++++.+.+... .. .+.. .+...++.+.++++++ . .+.|+|++|+++
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 4467775543 446789999998887542 11 1111 1334567788888876 2 578999999999
Q ss_pred HHHHHHHHhH--hhcCCcEEEEEeCCCCCCchhHH---HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHh
Q 011959 167 ACMGVLRLAR--AFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 241 (474)
Q Consensus 167 A~~~al~~ar--~~~~~~~ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~ 241 (474)
++..++.... ....+++||+.++.|++...... ...|..+..++... .+ .-|++++++.++
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~-------------~~~~~~l~~~i~ 155 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA-DL-------------LPDIRQLPELLT 155 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC-CC-------------CcCHHHHHHHhc
Confidence 9999988431 12456788888888877433222 22333222211110 00 017899998886
Q ss_pred cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehh--hhcCCC
Q 011959 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGG 319 (474)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~s--K~l~~G 319 (474)
. ++++|++..+++++|.+.+ +++|.++|++||+++|+|++|..... .. +.....+|+.++| |.+|.
T Consensus 156 ~---~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~~~~--~~--~~~~~~~d~~~~s~~K~~gp- 223 (398)
T TIGR03392 156 P---RTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQGVVHG--PP--DVQALDIDFYAFSGHKLYGP- 223 (398)
T ss_pred c---CceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhhcCCC--CC--ChhhcCCCEEEEecccccCC-
Confidence 3 5778888888888999998 99999999999999999999952211 11 1112346887777 97763
Q ss_pred cceEEEEecHHHHHhhcCCCCc------------------ccccCCCCChHHHHHHHHHHHHhcCC---CHHHHHHHHHH
Q 011959 320 LPVGAYGGRRDIMEMVAPAGPM------------------YQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITG 378 (474)
Q Consensus 320 ~~iG~~~~~~~i~~~~~~~~~~------------------~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~ 378 (474)
..+|++++++++++.+.+.... ..+-.-+.|..++.+..++++.+.+. ...++..++.+
T Consensus 224 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~ 303 (398)
T TIGR03392 224 TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLAD 303 (398)
T ss_pred CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 2389999999988777531100 00001133455677777888876553 33344444555
Q ss_pred HHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------------C
Q 011959 379 ELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------F 446 (474)
Q Consensus 379 ~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------------~ 446 (474)
++++.|.++. ++.........++.+.+... ....+.+.|.++||.+.++. .
T Consensus 304 ~l~~~l~~l~---g~~~~~~~~~~i~~~~~~~~--------------~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~ 366 (398)
T TIGR03392 304 LAEERLAQLP---GFRSFRCPGSSLLAFDFAGV--------------HHSDLAALLAESGIALRAGQHCAQPLMAALGVS 366 (398)
T ss_pred HHHHHHhcCC---CeEEeCCCCCcEEEEEeCCc--------------CHHHHHHHHHhCCEEEecCccchHHHHHHhCCC
Confidence 5555554321 22111112234445444211 12467788889999998653 2
Q ss_pred cceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 447 EAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 447 ~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
..+|++ ...|++|++++++.|++++++
T Consensus 367 ~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 367 GTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred CEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 357775 457999999999999998865
No 217
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.89 E-value=8.5e-22 Score=200.18 Aligned_cols=340 Identities=14% Similarity=0.112 Sum_probs=187.4
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCCCCC---CHHHHHHH-HHHHhhCC----CCC--eEEEeCCHHHHHHHHHHHhH---hh
Q 011959 112 IIGHADDQVLAALGETMKKGTSFGAP---CLLENVLA-EMVISAVP----SIE--MVRFVNSGTEACMGVLRLAR---AF 178 (474)
Q Consensus 112 ~lG~~~p~v~~a~~~~~~~~~~~~~~---~~~~~~la-~~l~~~~~----~~~--~v~~~~sGseA~~~al~~ar---~~ 178 (474)
..+..+|++++++.+.+. +..|..+ .++.++++ +.+.+.+. ..+ +|++|+|+++|+..++.... ..
T Consensus 103 ~p~~~~~~~~~~~~~~~~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll 181 (521)
T TIGR03801 103 QLGFDPDAFLYEMCDGII-GDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELL 181 (521)
T ss_pred CCCCCCCHHHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcC
Confidence 345556677777777653 2234222 23444555 34444322 223 89999999999999887421 23
Q ss_pred cCCcEEEEEeCCCCCCchhHHHhc--CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcccc
Q 011959 179 TGRERIIKFEGCYHGHADPFLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (474)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~--g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (474)
.++++|++.+|+|..+.... ... |..+..++.....+ .....+.+ |.+++++++. +++++|+++.++
T Consensus 182 ~pGD~Vlv~~P~y~~y~~~~-~l~~~g~~vv~i~~~~~~~------~g~~~~~~-d~~~l~~~~~---~~~kai~l~nP~ 250 (521)
T TIGR03801 182 KKGDKIALMTPIFTPYLEIP-ELPRYDFEVVRIKADEMTE------DGTHTWQY-PDKELEKLRD---PSIKALFVVNPS 250 (521)
T ss_pred CCCCEEEEeCCCcHHHHHHH-HHhcCCcEEEEeecccccc------cccccCCC-CHHHHHHhcC---CCCcEEEEeCCC
Confidence 45788999999998754332 232 22222211110000 00000111 6788887664 256777765556
Q ss_pred CCCCcccCCHHHHHHHHHHHHHh--CCEEEEeccccCcccCCCccccccCCCC-ce---eehhhhcC-CCcceEEEEecH
Q 011959 257 GNSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGFRLAYGGAQEYFGVTP-DL---TTLGKIIG-GGLPVGAYGGRR 329 (474)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~r~g~~~~~~~~g~~p-di---~t~sK~l~-~G~~iG~~~~~~ 329 (474)
|++|.+.+.++ +++|.++|++| +++||+||+|..|...... .....| .+ .+|||.++ +|||+||+++++
T Consensus 251 NPTG~vls~e~-l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s---l~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~ 326 (521)
T TIGR03801 251 NPPSVAMSDES-IEKIVDIVANDRPDLMILTDDVYGTFVDDFRS---LFAELPYNTIGVYSFSKYFGATGWRLGTIALHK 326 (521)
T ss_pred CCCCCCCCHHH-HHHHHHHHHhcCCCeEEEECCCchhhcccccc---hhhhCCCCEEEEEcchhhccCchhhhhhhhcCc
Confidence 88888887666 99999999987 9999999999877211111 111223 22 37999998 899999998875
Q ss_pred H-H----H--------HhhcC---------------------CCCcccccCCCCChHHHH-----HHHHHHHHhcCCCHH
Q 011959 330 D-I----M--------EMVAP---------------------AGPMYQAGTLSGNPLAMT-----AGIHTLKRLKEPGTY 370 (474)
Q Consensus 330 ~-i----~--------~~~~~---------------------~~~~~~~~t~~~~~~~~a-----aa~aal~~~~~~~~~ 370 (474)
+ + + +.+.+ ........|.+.+.+.|. ++.+.++. .+.+.
T Consensus 327 ~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~--~~~y~ 404 (521)
T TIGR03801 327 DNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK--ENAYK 404 (521)
T ss_pred hHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc--chhHH
Confidence 4 2 2 11110 001223345555555554 23333321 12333
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCee--EEeeeceeEEEEEecCCC----cCcccccccchHHHHHHHHHHH-HCCeEecc
Q 011959 371 EYLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGPV----YNFEDAKKSETTKFARFYRGML-EEGVYFAP 443 (474)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~~~~~~--~v~~~g~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~ 443 (474)
+..+ +.++++...+....++.. ..+..|.++++++..-.. ..|........ ...+++..|+ +.||.+.|
T Consensus 405 ~~~~---~~~~~R~~~l~~~Lg~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~-~~~~~~~~L~~e~gV~v~P 480 (521)
T TIGR03801 405 AETK---DICRRREKLLFRGLGLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNY-SPVDVLFRLAEETGIVLLP 480 (521)
T ss_pred HHHH---HHHHHHHHHHHHhcCCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccC-CHHHHHHHHHHhCCEEEeC
Confidence 3322 223222222222223221 223445666666642100 01111100000 1245666666 66999998
Q ss_pred cC-----CcceEEecC-CcHHHHHHHHHHHHHHHhh
Q 011959 444 SQ-----FEAGFTSLA-HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 444 ~~-----~~~~~~~~~-~t~e~i~~~l~~l~~~~~~ 473 (474)
+. .+++|++++ .+++++.++.++|.+++++
T Consensus 481 G~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 481 GGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred chhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 73 235889887 7999999999999998864
No 218
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.89 E-value=2.7e-20 Score=184.79 Aligned_cols=318 Identities=17% Similarity=0.194 Sum_probs=200.0
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CC--CeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCC
Q 011959 116 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~--~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (474)
.+|.|.+++........ ....+...++.+.++++++ .. ..++++.||+++++.++.. ...+++++|+.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~--~~~~~~~vi~~~~~~~ 85 (355)
T TIGR03301 10 TSATVRDAMLVDWCHWD--SEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGS--LVPRDGKLLVLINGAY 85 (355)
T ss_pred CCHHHHHHhhhhccCCC--HHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHh--ccCCCCeEEEECCCch
Confidence 35777777766322110 0113667788888888875 22 2678899999999999985 2345678888888877
Q ss_pred CCch-hHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHH
Q 011959 193 GHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 271 (474)
Q Consensus 193 g~~~-~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~ 271 (474)
+... ......|..+..++.+... ..|++++++.+++++ ++..+++..+++.+|.+.+ +++
T Consensus 86 ~~~~~~~a~~~g~~~~~i~~~~~~--------------~~d~~~l~~~l~~~~-~~~~v~~~~~~~~~G~~~~----~~~ 146 (355)
T TIGR03301 86 GERLAKICEYLGIPHTDLNFSEYE--------------PPDLNRIEEALAADP-DITHVATVHHETTTGILNP----LEA 146 (355)
T ss_pred hhHHHHHHHHcCCceEEEecCCCC--------------CCCHHHHHHHHHhCC-CceEEEEEecCCcccchhH----HHH
Confidence 7532 2222334332221111101 117999999997643 4555555555566888888 899
Q ss_pred HHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCcc---------
Q 011959 272 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY--------- 342 (474)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~--------- 342 (474)
|.++|++||+++|+|++++ +. +..+....+++..-+.+++|+++++..+|++++++++++.+......+
T Consensus 147 i~~l~~~~~~~livD~~~s-~g-~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (355)
T TIGR03301 147 IAKVARSHGAVLIVDAMSS-FG-AIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWA 224 (355)
T ss_pred HHHHHHHcCCEEEEEeccc-cC-CcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHH
Confidence 9999999999999999885 21 112222333333333479999875555899999999988876211110
Q ss_pred -----cccCCCCChHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCeeE-EeeeceeEEEEEecCC
Q 011959 343 -----QAGTLSGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAIC-GGYISGMFGFFFTEGP 412 (474)
Q Consensus 343 -----~~~t~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-v~~~g~~~~i~~~~~~ 412 (474)
....++.+..++.++.++++.+.++ +..++++++.+++++.|++...+ +... ....+.++++.+...+
T Consensus 225 ~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~--~~~~~~~~~~~~~~~~~~~~~ 302 (355)
T TIGR03301 225 YMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQ--PLLPERWQSPIIVSFLYPDDP 302 (355)
T ss_pred HhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCe--eecCCCCCCCcEEEEECCCCC
Confidence 0123456777778888888876543 34556677777777777654211 1111 1123444555543210
Q ss_pred CcCcccccccchHHHHHHHHHHHHCCeEecccCC---cceEEec--CCcHHHHHHHHHHHHHHH
Q 011959 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---EAGFTSL--AHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~~~~--~~t~e~i~~~l~~l~~~~ 471 (474)
.....++.+.|.++||.+.++.. +.+|++. .+++++++++++.|++++
T Consensus 303 -----------~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 303 -----------DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred -----------cchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 01235788999999999988742 4678853 459999999999998763
No 219
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=3.1e-20 Score=172.96 Aligned_cols=321 Identities=15% Similarity=0.130 Sum_probs=201.8
Q ss_pred CCHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEE
Q 011959 116 ADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 187 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~ 187 (474)
..++..+|+.+++..+...+| ....+.++|+.+.+..+ ..++|++|.|.++|++.++.. ....+..|++.
T Consensus 79 ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~--LA~p~aNILlP 156 (447)
T KOG0259|consen 79 TSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISS--LANPGANILLP 156 (447)
T ss_pred CCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHH--hcCCCCceecC
Confidence 578899999999988654433 34567788888777666 478999999999999999984 23456788888
Q ss_pred eCCCCCCchhHHHhcCCCCccCCC-CCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCH
Q 011959 188 EGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (474)
Q Consensus 188 ~~~yhg~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (474)
.|+|.-+ +....-.+..+....+ |.. -+.+ |++.+|.++.++ .++.||++|. |+.|.+. +.
T Consensus 157 rPGfp~Y-~~~a~~~~lEVR~ydlLPe~----------~weI---DL~~veal~DEN--T~AivviNP~-NPcGnVy-s~ 218 (447)
T KOG0259|consen 157 RPGFPLY-DTRAIYSGLEVRYYDLLPEK----------DWEI---DLDGVEALADEN--TVAIVVINPN-NPCGNVY-SE 218 (447)
T ss_pred CCCCchH-HHhhhhcCceeEeecccCcc----------ccee---chHHHHHhhccC--eeEEEEeCCC-CCCcccc-cH
Confidence 8888542 2222222333322211 111 1112 899999999864 4555555655 4555555 45
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-ccCCCc-ccccc-CCCCcee--ehhhhcC-CCcceEEEEecHH--------HH
Q 011959 267 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYF-GVTPDLT--TLGKIIG-GGLPVGAYGGRRD--------IM 332 (474)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~-g~~pdi~--t~sK~l~-~G~~iG~~~~~~~--------i~ 332 (474)
+-|++|.++|+|+|+++|.||||..+ ..+..| ....| .+.|-++ .+||..- .|||+||++.... ++
T Consensus 219 ~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~ 298 (447)
T KOG0259|consen 219 DHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVV 298 (447)
T ss_pred HHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHH
Confidence 56999999999999999999999877 555443 33333 3456444 4789766 8999999976432 22
Q ss_pred HhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH----HHHHHHHHHHHHHHHhhhcCCee-EEeeeceeEEE-
Q 011959 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY----LNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGF- 406 (474)
Q Consensus 333 ~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----~~~~~~~l~~~L~~~~~~~~~~~-~v~~~g~~~~i- 406 (474)
+.+. .+. .-+.+.+.+.|+|.-.-|+.-. +++.++ ++.+.+...++|. +.|... .+++.|.|+.+
T Consensus 299 q~~~---~~~-~~~~~p~TiiQ~AlP~IL~kTp-~efF~k~~~~lk~na~l~y~~Lk----~IP~l~cp~kPeg~mylmv 369 (447)
T KOG0259|consen 299 QGIK---NFL-DIIPGPATIIQGALPDILEKTP-EEFFDKKLSFLKSNADLCYSRLK----DIPCLTCPVKPEGCMYLMV 369 (447)
T ss_pred HHHH---HHH-hccCCccHhHHHHhHHHHHhCh-HHHHHHHHHHHHhhHHHHHHHHh----cCCCcccCcCCCcceEEEe
Confidence 3332 111 1233445555555444444221 333333 3344444444444 445443 56777776543
Q ss_pred EEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC----CcceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 407 FFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.+.-. .+ ++-..-..|++.|. |+.+++-|+. .+++|+.++...+.+++++++|+++..+
T Consensus 370 ~l~~s---~~-----~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 370 KLNLS---LF-----PDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred ccchh---hh-----ccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHHHHHHHh
Confidence 33211 11 11122245666665 7789988873 4578999999999999999999998754
No 220
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=2.4e-21 Score=183.85 Aligned_cols=326 Identities=20% Similarity=0.228 Sum_probs=222.4
Q ss_pred cCCCE--EEeccCChhhccCCC--CCHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCH
Q 011959 96 IDGNE--YIDYVGSWGPAIIGH--ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSG 164 (474)
Q Consensus 96 ~dG~~--~iD~~~~~~~~~lG~--~~p~v~~a~~~~~~~-~~~~------~~~~~~~~~la~~l~~~~~~~~~v~~~~sG 164 (474)
..|++ .|++.+- |+||. ++-...++..+.+++ +... -+..+...++.+.++++. +.+..+..+-|
T Consensus 131 ~tG~~~~~lNlgSY---NYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~-g~e~a~vF~mG 206 (519)
T KOG1357|consen 131 YTGTRSRCLNLGSY---NYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFL-GVEDAIVFSMG 206 (519)
T ss_pred eccceeeeeeeccc---ccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhc-CCcceEEEecc
Confidence 34554 4555444 88887 344444455555554 2111 135677788888888888 55666666668
Q ss_pred HHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc--
Q 011959 165 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN-- 242 (474)
Q Consensus 165 seA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~-- 242 (474)
...|...+. .+.++...|+.+.-.|++..... +..++++..+.|||+++||++|++
T Consensus 207 f~TNs~~~p---~l~~~gsLIiSDelNHaSi~~Ga-------------------RLSgAtiRVfkHNdm~~LEr~Lrd~I 264 (519)
T KOG1357|consen 207 FATNSMNIP---SLLGKGSLIISDELNHASLITGA-------------------RLSGATTRVFRHNDMQGLERLLRDAI 264 (519)
T ss_pred ccccccCcc---eeecCCcceeeccccchheeccc-------------------cccCceEEEEecCCHHHHHHHHHHHH
Confidence 888877777 66788888888888998643222 344557889999999999999974
Q ss_pred -------C-CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCCCC---ce
Q 011959 243 -------N-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTP---DL 309 (474)
Q Consensus 243 -------~-~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~p---di 309 (474)
+ +.+...|++|.+.++.|.+.. |.++.++++||.++|+.||+| .|. .....+..+++|+.| ||
T Consensus 265 ~~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDI 340 (519)
T KOG1357|consen 265 VYGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDI 340 (519)
T ss_pred hcCCCCcCCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhhee
Confidence 2 335568888999999999999 888999999999999999999 455 344567888999876 44
Q ss_pred e--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-------CCHHHHHHHHHHHH
Q 011959 310 T--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-------PGTYEYLNKITGEL 380 (474)
Q Consensus 310 ~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-------~~~~~~~~~~~~~l 380 (474)
+ ||.|+++++ -|++.+++++++.++.........| +.+|+.+.-.+..++.+.- ....+++.++..++
T Consensus 341 mMGtftKSfga~--GGyiagsk~lid~lrt~s~~~~yat-~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yf 417 (519)
T KOG1357|consen 341 MMGTFTKSFGAA--GGYIAGSKELIDYLRTPSPSALYAT-SLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYF 417 (519)
T ss_pred ecceehhhcccc--cceecCcHHHHhhhccCCCceeecc-cCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHH
Confidence 4 899999952 5777899999999985433323333 3455566666777887753 24566777788888
Q ss_pred HHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcc---------eEE
Q 011959 381 TQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA---------GFT 451 (474)
Q Consensus 381 ~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~---------~~~ 451 (474)
+..|+..+ |.+..+..++..+...-...+...+.+.|+++++-+...+++. +++
T Consensus 418 r~~l~~~g-----------------fivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~ 480 (519)
T KOG1357|consen 418 RWELQKMG-----------------FIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCL 480 (519)
T ss_pred HHhhhcCc-----------------EEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhh
Confidence 88777642 2222111111111111122334578889999977665555442 345
Q ss_pred ecCCcHHHHHHHHHHHHHHH
Q 011959 452 SLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 452 ~~~~t~e~i~~~l~~l~~~~ 471 (474)
+..||.|+++++++.++++-
T Consensus 481 Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 481 SASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred cccccHHHHHHHHHHHhhhc
Confidence 78999999999999998764
No 221
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.88 E-value=4e-20 Score=187.51 Aligned_cols=333 Identities=14% Similarity=0.042 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhH
Q 011959 119 QVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF 198 (474)
Q Consensus 119 ~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~ 198 (474)
.+.+++.+++..+...+.......+|.+.+++++ +.+.+++++||++|+..+++ ++.++++||..++.|..+ ...
T Consensus 58 a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~-~~~~vv~t~ggt~A~~~~~~---all~pGDVii~~p~~~~~-~~~ 132 (460)
T PRK13238 58 AMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIF-GYPYTIPTHQGRAAEQILFP---VLIKKGDVVPSNYHFDTT-RAH 132 (460)
T ss_pred hhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHh-CCCcEEECCCHHHHHHHHHH---HhCCCCCEEccCCcccch-HHH
Confidence 5788888887665432233444566667777766 56789999999999999987 344444477766655543 344
Q ss_pred HHhcCCCCccCCCCCCCCCCCCCCCceEEccC-CCHHHHHHHHhcCC-CCeEEEEEccccCCCCcccCCHHHHHHHHHHH
Q 011959 199 LVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (474)
Q Consensus 199 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~d~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (474)
+...|..+...+....... . . ...+.. -|++.|++.+.+++ +++++|+++.++|++|..+.+.+.+++|+++|
T Consensus 133 i~~~G~~~v~v~~~~~~~~-~--~--~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia 207 (460)
T PRK13238 133 IELNGATAVDLVIDEALDT-G--S--RHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIA 207 (460)
T ss_pred HHHcCCEEEEEeccccccc-c--c--cccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHH
Confidence 4444543322211100000 0 0 000111 18999999998543 46899999888887664444455599999999
Q ss_pred HHhCCEEEEeccccC--c-cc-----CCCc-ccc-c---cCCCCceeehh--hhcCCCcceEEE-Eec-HHHHHhhcCCC
Q 011959 277 KENGALLIFDEVMTG--F-RL-----AYGG-AQE-Y---FGVTPDLTTLG--KIIGGGLPVGAY-GGR-RDIMEMVAPAG 339 (474)
Q Consensus 277 ~~~g~llI~DEv~~g--~-r~-----g~~~-~~~-~---~g~~pdi~t~s--K~l~~G~~iG~~-~~~-~~i~~~~~~~~ 339 (474)
++||++||+|+++.. . .. +... ... . .+-..|+.++| |.+.+ +.|++ +++ +++++.++...
T Consensus 208 ~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~--~~GG~i~~~d~~l~~~~~~~~ 285 (460)
T PRK13238 208 KKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMV--NIGGLLCFRDEDLFTECRTLC 285 (460)
T ss_pred HHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCC--cceeEEEcChHHHHHHhhhcc
Confidence 999999999997741 1 11 1000 000 0 00113444433 21111 33444 556 57888776432
Q ss_pred Cccc-ccCCCCChHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcc
Q 011959 340 PMYQ-AGTLSGNPLA-MTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 417 (474)
Q Consensus 340 ~~~~-~~t~~~~~~~-~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~ 417 (474)
...+ ..|+++++.. ++|...+|+...+++..+...++.++|.+.|++. ++....+..|.++.+++..- .
T Consensus 286 ~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~----G~~~~~p~Gg~~v~~d~~~~-----~ 356 (460)
T PRK13238 286 ILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA----GVPIQTPAGGHAVFVDAGKF-----L 356 (460)
T ss_pred cccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC----CCCeEccCCceEEEEEchhc-----C
Confidence 2222 3488887666 4444446665444566666666678888888763 44444445565555555321 0
Q ss_pred cccccchHHHHHHHHHHH-HCCeEecccC-----------------CcceEEecCC---cHHHHHHHHHHHHHHHh
Q 011959 418 DAKKSETTKFARFYRGML-EEGVYFAPSQ-----------------FEAGFTSLAH---SSDDIQHTITAAEKVLR 472 (474)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~-----------------~~~~~~~~~~---t~e~i~~~l~~l~~~~~ 472 (474)
+...........++..|+ +.||.+.|.+ ...+|+.+.- |++++|.+.++|+++.+
T Consensus 357 ~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 357 PHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred CCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 000000001245665555 6799887753 1345665545 99999999999998764
No 222
>PLN02368 alanine transaminase
Probab=99.88 E-value=3.3e-21 Score=192.94 Aligned_cols=245 Identities=16% Similarity=0.151 Sum_probs=160.3
Q ss_pred CHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHhHhh-cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCC
Q 011959 138 CLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAF-TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 213 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al~~ar~~-~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~ 213 (474)
.++++++++++.+.++ ..++|++|+|+++++..+++. .. ..++.|++.+++|..+... +...|..+..++...
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~--l~~~pGd~Vli~~P~Y~~y~~~-~~~~g~~~v~v~~~~ 186 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNA--VIRGEKDGVLVPVPQYPLYSAT-ISLLGGTLVPYYLEE 186 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHH--HcCCCCCEEEEeCCCCccHHHH-HHHcCCEEEEEeccc
Confidence 4778888888877654 568999999999999999884 22 3578899999999886543 334444332222111
Q ss_pred CCCCCCCCCCceEEccCCCHHHHHHHHhcC---CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011959 214 SPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (474)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (474)
..++ . -|+++|++.++.. ..+++++++..++|++|.+.+.++ +++|.++|++||++||+||+|.
T Consensus 187 ~~~~---------~---~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~-l~~l~~~a~~~~~~II~DE~Y~ 253 (407)
T PLN02368 187 SENW---------G---LDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEAN-LREILKFCYQERLVLLGDEVYQ 253 (407)
T ss_pred ccCC---------C---CCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHH-HHHHHHHHHHcCCEEEEEcccc
Confidence 1010 0 1789999988632 114665565555788998887666 9999999999999999999998
Q ss_pred Cc-ccCC-Cc-c-cccc-CC------CCcee---ehhhhc-C-CCcceEEEE---ecHHHHHhhcCCCCcccccCCCCCh
Q 011959 291 GF-RLAY-GG-A-QEYF-GV------TPDLT---TLGKII-G-GGLPVGAYG---GRRDIMEMVAPAGPMYQAGTLSGNP 351 (474)
Q Consensus 291 g~-r~g~-~~-~-~~~~-g~------~pdi~---t~sK~l-~-~G~~iG~~~---~~~~i~~~~~~~~~~~~~~t~~~~~ 351 (474)
.| ..+. .+ . .+.. ++ .+.++ +|||++ + +|||+||++ +++++++.+.. . ...+++.|.
T Consensus 254 ~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~---~-~~~~~~~~~ 329 (407)
T PLN02368 254 QNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYK---V-ASIALSPNV 329 (407)
T ss_pred ccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHH---H-hcccCCCCc
Confidence 88 5442 21 1 1111 11 12333 689999 5 899999998 58889888873 2 123567888
Q ss_pred HHHHHHHHHHHHhc-----------C-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEE
Q 011959 352 LAMTAGIHTLKRLK-----------E-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 406 (474)
Q Consensus 352 ~~~aaa~aal~~~~-----------~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i 406 (474)
+++.++.++|+.-+ + ..+.+.++++++.+.+.|+++ +........|.|+.+
T Consensus 330 ~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~----~g~~~~~P~Gafy~~ 392 (407)
T PLN02368 330 SGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC----KNVVCNFTEGAMYSF 392 (407)
T ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCeEeCCCCeeeEec
Confidence 99999998885321 0 123445555666666666543 223334455555443
No 223
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.88 E-value=2e-19 Score=181.44 Aligned_cols=326 Identities=15% Similarity=0.163 Sum_probs=204.3
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC---CC------CCHHHHHHHHHHHhhCC--CCCeEEEeCCHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GA------PCLLENVLAEMVISAVP--SIEMVRFVNSGTE 166 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~------~~~~~~~la~~l~~~~~--~~~~v~~~~sGse 166 (474)
+.-|+|-.+. |..++.+.+++.+.+...... +. ..+...++.+.++++++ ..+.|+|++|+++
T Consensus 19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 3467775543 446789999998888652111 11 12345677788888886 3578999999999
Q ss_pred HHHHHHHHhH--hhcCCcEEEEEeCCCCCCchhHH---HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHh
Q 011959 167 ACMGVLRLAR--AFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 241 (474)
Q Consensus 167 A~~~al~~ar--~~~~~~~ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~ 241 (474)
++..+++... ...++++||+.++.|++...... ...|..+..++... .+ ..|++++++.++
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~-------------~~d~~~l~~~i~ 158 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA-DR-------------LPDVDLLPELIT 158 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC-CC-------------cCCHHHHHHhcC
Confidence 9999988431 12456789998888877432222 22343322211110 00 117899999886
Q ss_pred cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCCCccccccCCCCceee--hhhhcCC
Q 011959 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTT--LGKIIGG 318 (474)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pdi~t--~sK~l~~ 318 (474)
. ++++|++..+++++|.+.| +++|.++|++||+++|+|++|. |.. ..... ...+|+++ ++|.+|.
T Consensus 159 ~---~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~~g~~---~~~~~--~~~~d~~~~s~~K~~gp 226 (401)
T PRK10874 159 P---RTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQGAVHF---PADVQ--ALDIDFYAFSGHKLYGP 226 (401)
T ss_pred c---CcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcccccc---cCCch--hcCCCEEEEecccccCC
Confidence 3 5778888888889999998 9999999999999999999995 211 11112 23467664 5597762
Q ss_pred CcceEEEEecHHHHHhhcCCC---Cc---------------ccccCCCCChHHHHHHHHHHHHhcCC---CHHHHHHHHH
Q 011959 319 GLPVGAYGGRRDIMEMVAPAG---PM---------------YQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKIT 377 (474)
Q Consensus 319 G~~iG~~~~~~~i~~~~~~~~---~~---------------~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~ 377 (474)
..+|++++++++++.+.+.. .. ..+...+.|..++.+..++++.+.+. ...++.+++.
T Consensus 227 -~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~ 305 (401)
T PRK10874 227 -TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLA 305 (401)
T ss_pred -CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 13799999999888765310 00 00011133556777777778776543 2344555555
Q ss_pred HHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------------
Q 011959 378 GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------ 445 (474)
Q Consensus 378 ~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------------ 445 (474)
+++++.|+++. ++.......+.++.+.+... ...++.+.|.++||.+.++.
T Consensus 306 ~~l~~~l~~~~---g~~~~~~~~~~i~~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~ 368 (401)
T PRK10874 306 TLAEDALAKLP---GFRSFRCQDSSLLAFDFAGV--------------HHSDLVTLLAEYGIALRAGQHCAQPLLAALGV 368 (401)
T ss_pred HHHHHHHhcCC---CEEEeCCCCCcEEEEEECCc--------------CHHHHHHHHHHCCcEEeccccchHHHHHHhCC
Confidence 55555554421 22111122344555554210 12567788889999988743
Q ss_pred CcceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 446 FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 446 ~~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
...+|++ ...|++|++++++.|+++++.
T Consensus 369 ~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 369 TGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred CCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 2356775 345999999999999998765
No 224
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=1.8e-20 Score=174.93 Aligned_cols=378 Identities=19% Similarity=0.224 Sum_probs=256.0
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeeccCEEEEcCCCEEEeccCChhhccCCC-CCHHHHHHHHHHHHhc
Q 011959 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG 131 (474)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~ 131 (474)
.++.-+...+|.|...-.+.-.-.+. ..+.+++..-+..++ +||+.+++|.+. |+||. .++++.+.+...+.+.
T Consensus 50 ~~eideLiedw~PEPLV~~~~~~~~~-~~~~v~e~~~~~~~~-i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~lrky 124 (467)
T KOG1358|consen 50 EQEIDELIEDWEPEPLVPPVPEDHPV-LNTPVLESVMLPHVT-IDGKDVLNFASA---NFLGLIENEEIKEEASFTLRKY 124 (467)
T ss_pred HHHHHHHHhcCCCCCCCCCCcccccc-cCCcccccccCCceE-ecCceeecccch---hhhhhcccHHHHHHHHHHHHHh
Confidence 46677777888888765543211111 124557777788777 999999999998 99998 5999999999999882
Q ss_pred -C------CCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCC
Q 011959 132 -T------SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGS 204 (474)
Q Consensus 132 -~------~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~ 204 (474)
. +|.+..+...+|.+.+++.+ +.+..++.+-|..++..++. +++++++||..+..-+-.....+.
T Consensus 125 GvGsCGPrGFYGt~DvHldlE~~iakF~-G~E~aivYs~gF~ti~S~ip---afsKrGDIi~~de~~nfaIq~Glq---- 196 (467)
T KOG1358|consen 125 GVGSCGPRGFYGTIDVHLDLEKRIAKFM-GTEDAIVYSYGFSTIESAIP---AFSKRGDIIFVDEAVNFAIQKGLQ---- 196 (467)
T ss_pred CCCCcCCCcccccceeecccHHHHHHhh-CCcceeeeccccchhhhcch---hhhccCcEEEEehhhhHHHHHHHh----
Confidence 2 23344555566667777666 55555555668999999999 899999999987654332211111
Q ss_pred CCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC-------C---CeEEEEEccccCCCCcccCCHHHHHHHHH
Q 011959 205 GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-------G---EIAAIILEPVVGNSGFIAPKPDFLNAIRR 274 (474)
Q Consensus 205 ~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~-------~---~~a~vi~ep~~~~~G~i~~~~~~l~~l~~ 274 (474)
.....+..|.|||++++|+++.+.. . ..+-|++|..+.|+|.+.| +++|.+
T Consensus 197 ---------------lSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~ 257 (467)
T KOG1358|consen 197 ---------------LSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVK 257 (467)
T ss_pred ---------------hhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHH
Confidence 1233578899999999998876421 1 1457888999999999999 999999
Q ss_pred HHHHhCCEEEEeccc-cCc-ccCCCccccccCCCC---ceee--hhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCC
Q 011959 275 ITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTP---DLTT--LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 347 (474)
Q Consensus 275 l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~p---di~t--~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~ 347 (474)
+..||...+|.||.+ .|. ...+.+..+|+++.+ |+++ ++-++++| -|+++|+.-+.++-+-.+..+.+ +-
T Consensus 258 lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~--GgFc~G~~~i~~hQrLSg~~Y~f-SA 334 (467)
T KOG1358|consen 258 LKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASG--GGFCAGKSFIADHQRLSGSGYCF-SA 334 (467)
T ss_pred HHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccccc--CceeecceeeEeeeeccccceee-ec
Confidence 999999999999999 455 322356779999863 5665 44566632 45667765555443322333333 34
Q ss_pred CCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHH
Q 011959 348 SGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 426 (474)
Q Consensus 348 ~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 426 (474)
+.+|....||..++.++++ ++..+.++.....+...|+.. .++...-.....++.+.+.....+ ...+...
T Consensus 335 slPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~---s~~~v~~~~~SPi~hl~l~~~~~s-----~e~e~~l 406 (467)
T KOG1358|consen 335 SLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSN---SGFIVSGSPESPIIHLQLERSYGS-----REKEEKL 406 (467)
T ss_pred cCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcC---CceEEecCcCCceeeeeecccccc-----hHHHHHH
Confidence 6788888999999998877 677778888777777777652 122222222344444444332110 0112344
Q ss_pred HHHHHHHHHHCCeEecccC----------CcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 427 FARFYRGMLEEGVYFAPSQ----------FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 427 ~~~~~~~l~~~Gv~v~~~~----------~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.+++++.++.+|+++.... .+.+++ +..+++|||+++.+.++++...
T Consensus 407 L~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 407 LEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred HHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 5778888887798876542 123444 6788999999999999987654
No 225
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.87 E-value=3e-20 Score=184.52 Aligned_cols=313 Identities=16% Similarity=0.151 Sum_probs=196.1
Q ss_pred CCHHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHhhCCC-C-CeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCC
Q 011959 116 ADDQVLAALGETMKKGTSFGA--PCLLENVLAEMVISAVPS-I-EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 191 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~~-~-~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (474)
.+++|.+++.+.+.. +.+ ..+...++.+.+++.++. . +.+++++||++|+..+++.. ...++.|++.++++
T Consensus 10 ~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~--~~~g~~vl~~~~~~ 84 (356)
T cd06451 10 VPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL--LEPGDKVLVGVNGV 84 (356)
T ss_pred CCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh--CCCCCEEEEecCCc
Confidence 467777777544321 222 234467888889888862 3 45789999999999999842 34567788877766
Q ss_pred CCCc-hhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHH
Q 011959 192 HGHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (474)
Q Consensus 192 hg~~-~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (474)
++.. .......|..+...+.... ...|++++++.++++ ++++|++..+++++|.+.+ ++
T Consensus 85 ~~~~~~~~~~~~g~~~~~v~~~~~--------------~~~~~~~l~~~i~~~--~~~~v~i~~~~~~~G~~~~----~~ 144 (356)
T cd06451 85 FGDRWADMAERYGADVDVVEKPWG--------------EAVSPEEIAEALEQH--DIKAVTLTHNETSTGVLNP----LE 144 (356)
T ss_pred hhHHHHHHHHHhCCCeEEeecCCC--------------CCCCHHHHHHHHhcc--CCCEEEEeccCCCcccccC----HH
Confidence 6532 2223333433222111000 012799999998742 5677777777788999988 99
Q ss_pred HHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhcCCCcceEEEEecHHHHHhhcC--CCCcc----
Q 011959 271 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAP--AGPMY---- 342 (474)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~--~~~~~---- 342 (474)
+|.++|++||+++|+|++|. +. +.......++ .|++ +++|.++++.++|+++.++++++.+.. .....
T Consensus 145 ~i~~~a~~~~~~li~D~~~~-~g-~~~~~~~~~~--~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 220 (356)
T cd06451 145 GIGALAKKHDALLIVDAVSS-LG-GEPFRMDEWG--VDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDL 220 (356)
T ss_pred HHHHHHHhcCCEEEEeeehh-cc-CccccccccC--ccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecH
Confidence 99999999999999999984 20 0111122223 4555 568999976679999999998877652 10000
Q ss_pred -------c---ccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee-eceeEEEEE
Q 011959 343 -------Q---AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFGFFF 408 (474)
Q Consensus 343 -------~---~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~~~~i~~ 408 (474)
. ....+.++..+.++.++++.+.. +...++.+++.+++++.|++... .+...... .+.++++.+
T Consensus 221 ~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~--~~~~~~~~~~~~~~~~~~ 298 (356)
T cd06451 221 LLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGL--KLLAKPELRSPTVTAVLV 298 (356)
T ss_pred HHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC--eeccCcccCCCceEEEEC
Confidence 0 11223455556777788877654 34566777777778887776421 11111111 122223332
Q ss_pred ecCCCcCcccccccchHHHHHHHHHHHHC-CeEecccC----CcceEEec--CCcHHHHHHHHHHHHHHHh
Q 011959 409 TEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ----FEAGFTSL--AHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~----~~~~~~~~--~~t~e~i~~~l~~l~~~~~ 472 (474)
.. ......+++.|.++ ||.+.++. ...+|+++ .+|+||+++++++|+++++
T Consensus 299 ~~-------------~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 299 PE-------------GVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CC-------------CCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 11 11235788999998 99998653 23567754 5799999999999998864
No 226
>PRK02948 cysteine desulfurase; Provisional
Probab=99.86 E-value=2.3e-19 Score=179.85 Aligned_cols=314 Identities=16% Similarity=0.116 Sum_probs=194.1
Q ss_pred CCCCHHHHHHHHHHHHhc-CCCC-C------CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHh-hcCCcE
Q 011959 114 GHADDQVLAALGETMKKG-TSFG-A------PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-FTGRER 183 (474)
Q Consensus 114 G~~~p~v~~a~~~~~~~~-~~~~-~------~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~-~~~~~~ 183 (474)
|..++.+++++.+.++.. ...+ . ......++.+.++++++ ..+.|+|++|+++++..+++.... +.++++
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~ 89 (381)
T PRK02948 10 TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKK 89 (381)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCC
Confidence 446899999999888652 1111 1 12445677888888886 567899999999999999875421 223334
Q ss_pred EEEEeCCCCCCchhHH---HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCC
Q 011959 184 IIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 260 (474)
Q Consensus 184 ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (474)
.|+.....|....... ...|..+..++.. ..+ ..|++++++.+++ ++++|+++.+++++|
T Consensus 90 ~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~-~~~-------------~~d~~~l~~~l~~---~~~lv~~~~~~n~tG 152 (381)
T PRK02948 90 HIITTPMEHASIHSYFQSLESQGYTVTEIPVD-KSG-------------LIRLVDLERAITP---DTVLASIQHANSEIG 152 (381)
T ss_pred EEEECCcccHHHHHHHHHHHhCCCEEEEEeeC-CCC-------------CCCHHHHHHhcCC---CCEEEEEECCcCCcE
Confidence 4555555555433332 2223222211110 001 1278999988863 567888888899999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee--ehhhhcC-CCcceEEEEecHHH-HHhh
Q 011959 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIG-GGLPVGAYGGRRDI-MEMV 335 (474)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~-~G~~iG~~~~~~~i-~~~~ 335 (474)
.+.| +++|.++|++||+++|+|++|. | .. ......++ .|++ +++|.+| .| +|+++.++++ +..+
T Consensus 153 ~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~--~~~~~~~~--~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~ 221 (381)
T PRK02948 153 TIQP----IAEIGALLKKYNVLFHSDCVQT-FGKL--PIDVFEMG--IDSLSVSAHKIYGPKG--VGAVYINPQVRWKPV 221 (381)
T ss_pred eehh----HHHHHHHHHHcCCEEEEEChhh-cccc--ccCcccCC--CCEEEecHHhcCCCCc--EEEEEEcCCCCCCCc
Confidence 9998 8999999999999999998884 3 11 11122233 4554 7899887 34 8998888764 1111
Q ss_pred cCCC-CcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee-----eceeEEEE
Q 011959 336 APAG-PMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-----ISGMFGFF 407 (474)
Q Consensus 336 ~~~~-~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-----~g~~~~i~ 407 (474)
.... .......++.|.++++++.++++.+.+ ++..++++++.+++++.|+++ ++.....+ ...++.+.
T Consensus 222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~v~~~~~~~~~~~~i~~~~ 297 (381)
T PRK02948 222 FPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL----PLPIEVEGHSTSCLPHIIGVT 297 (381)
T ss_pred ccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEeCCCccCcCCEEEEE
Confidence 1000 000112346788888999999887633 455667777777777777654 22111111 11122222
Q ss_pred EecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----------------------CcceEEe--cCCcHHHHHH
Q 011959 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------------FEAGFTS--LAHSSDDIQH 462 (474)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------------~~~~~~~--~~~t~e~i~~ 462 (474)
+.. ....++...|.++||.+..+. ...+|++ ..+|++|+|+
T Consensus 298 ~~~--------------~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~ 363 (381)
T PRK02948 298 IKG--------------IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDT 363 (381)
T ss_pred eCC--------------CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHH
Confidence 211 012456667788999998532 1356776 4469999999
Q ss_pred HHHHHHHHHhh
Q 011959 463 TITAAEKVLRQ 473 (474)
Q Consensus 463 ~l~~l~~~~~~ 473 (474)
+++.|++++++
T Consensus 364 l~~~l~~~~~~ 374 (381)
T PRK02948 364 TIHALETIGNQ 374 (381)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 227
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.86 E-value=4.4e-19 Score=176.62 Aligned_cols=316 Identities=16% Similarity=0.158 Sum_probs=196.5
Q ss_pred CHHHHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHhhCCC-C--CeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCC
Q 011959 117 DDQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVPS-I--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~~-~--~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (474)
++.|.+++.+... +.+ ...+...++.+.++++++. . +.+++++||+++++.++.. ....++++|+..+++|
T Consensus 15 ~~~v~~~~~~~~~---~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~--l~~~~~~vlv~~~~~~ 89 (363)
T TIGR02326 15 SRTVKEAMLFDWC---TWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGS--AVPKDGKLLVVINGAY 89 (363)
T ss_pred CHHHHHHhCCCCC---CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHh--cCCCCCeEEEEeCChh
Confidence 4556555544331 111 1234456677788887762 2 3699999999999999984 2345677888777777
Q ss_pred CCch-hHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHH
Q 011959 193 GHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 271 (474)
Q Consensus 193 g~~~-~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~ 271 (474)
+... ......|..+..++.+.... -|+++++++++.++ +++.|.+..+.+++|.+.| +++
T Consensus 90 ~~~~~~~a~~~g~~~~~v~~~~~~~--------------~d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~----i~~ 150 (363)
T TIGR02326 90 GARIVQIAEYLGIPHHVVDTGEVEP--------------PDVVEVEAILAADP-AITHIALVHCETTTGILNP----IEA 150 (363)
T ss_pred hHHHHHHHHHcCCceEEEeCCCCCC--------------CCHHHHHHHHhhCC-CccEEEEEeecCCccccCc----HHH
Confidence 7542 22233343332221111111 17999999987643 4556666666788999999 999
Q ss_pred HHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhcCCCcceEEEEecHHHHHhhcCCCCc-c------
Q 011959 272 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM-Y------ 342 (474)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~-~------ 342 (474)
|.++|++||+++|+|++|+ +. +.......+ .+|++ +++|+++++..+|+++++++.++.+...... .
T Consensus 151 I~~l~~~~g~~livD~~~~-~g-~~~~~~~~~--~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 226 (363)
T TIGR02326 151 VAKLAHRHGKVTIVDAMSS-FG-GIPIDIAEL--HIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQ 226 (363)
T ss_pred HHHHHHHcCCEEEEEcccc-cc-Ccccchhhc--CccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHH
Confidence 9999999999999999885 31 112222223 35655 6889997655689999999888765421110 0
Q ss_pred --------cccCCCCChHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEec
Q 011959 343 --------QAGTLSGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (474)
Q Consensus 343 --------~~~t~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (474)
....|+.++..+.+..++++.+.++ +..++++++.+++++.|+++.......... ..+.+.++.+..
T Consensus 227 ~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~~~~ 305 (363)
T TIGR02326 227 WRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEI-QSPIITSFYSPE 305 (363)
T ss_pred HHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccc-CCceEEEEECCC
Confidence 0123456777777777888776443 355667777777777776642111000001 122334444422
Q ss_pred CCCcCcccccccchHHHHHHHHHHHHCCeEecccC---CcceEEe--cCCcHHHHHHHHHHHHHHHh
Q 011959 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGFTS--LAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~~~~--~~~t~e~i~~~l~~l~~~~~ 472 (474)
.+ ......+.+.|.++||.+.++. ...+|++ ..++.+++++++++|++++.
T Consensus 306 ~~-----------~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 306 DP-----------DYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CC-----------CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 10 0112467888999999998774 2457875 34699999999999998864
No 228
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.86 E-value=3.2e-19 Score=178.65 Aligned_cols=322 Identities=18% Similarity=0.145 Sum_probs=192.2
Q ss_pred EEeccCChhhccCCCCCHHHHHHHHHHHHhcCCC--CCC------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHH
Q 011959 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAP------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGV 171 (474)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~------~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~a 171 (474)
|+|..+. +..++.|++++.+.+.....+ ... .+...++.+++++.++ ..++++|++||++++..+
T Consensus 2 yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~a 75 (379)
T TIGR03402 2 YLDNNAT------TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTA 75 (379)
T ss_pred cCCCcCC------CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHH
Confidence 5665443 335789999999987642111 111 2335577788888886 567899999999999999
Q ss_pred HHHhHhh-cCCcEEEEEeCCCCCCchhHH--HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 172 LRLARAF-TGRERIIKFEGCYHGHADPFL--VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 172 l~~ar~~-~~~~~ii~~~~~yhg~~~~~~--~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
++..... .+++.||+....|++...... ...|..+..++.. ..+ .-|++++++.+++ +++
T Consensus 76 l~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~-~~g-------------~~~~~~l~~~i~~---~~~ 138 (379)
T TIGR03402 76 IKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVD-EEG-------------RLDLEELRAAITD---DTA 138 (379)
T ss_pred HHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccC-CCC-------------cCCHHHHHHhcCC---CcE
Confidence 9864322 344556555555544322211 1123322221111 011 0178999998863 568
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehh--hhcCCCcceEEEE
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYG 326 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~s--K~l~~G~~iG~~~ 326 (474)
+|+++.+++++|.+.| +++|.++|++||+++|+|++|+ + |. ...+......|++++| | +.|...+|++.
T Consensus 139 lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~--g~-~~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~ 209 (379)
T TIGR03402 139 LVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-V--GK-IPIDLKEMNIDMLSLSGHK-LHGPKGVGALY 209 (379)
T ss_pred EEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-c--cc-cccCcccCCCCEEEEcHHH-cCCCCceEEEE
Confidence 8888888889999999 8899999999999999999995 1 11 1112223456888777 9 44333488887
Q ss_pred ecHHHHHhhcCCCC--c--ccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCe-eEEe-
Q 011959 327 GRRDIMEMVAPAGP--M--YQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHA-ICGG- 398 (474)
Q Consensus 327 ~~~~i~~~~~~~~~--~--~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~v~- 398 (474)
.+++.. +.+... . ......+.|..+..+..++++.+.+ +...++.+++.+++++.|.+ ..+.. ....
T Consensus 210 v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~---~~~~~~~~~~~ 284 (379)
T TIGR03402 210 IRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA---RIPDARLNGDP 284 (379)
T ss_pred ECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh---hCCCEEEeCCC
Confidence 776541 221100 0 0011223466667777777877654 33334555555555555543 12211 1100
Q ss_pred --eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----------------------CcceEEe-
Q 011959 399 --YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------------FEAGFTS- 452 (474)
Q Consensus 399 --~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------------~~~~~~~- 452 (474)
..+..+.+.+... + ..++...|.++||.+..+. ...+|++
T Consensus 285 ~~~~~~~~~~~~~~~-----------~---~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~ 350 (379)
T TIGR03402 285 TKRLPNTVNISFEYI-----------E---GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSL 350 (379)
T ss_pred ccCCCCEEEEEecCC-----------C---HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEc
Confidence 0112222222211 1 2467778888899987642 1346775
Q ss_pred -cCCcHHHHHHHHHHHHHHHhh
Q 011959 453 -LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 453 -~~~t~e~i~~~l~~l~~~~~~ 473 (474)
...|++|||++++.|++++++
T Consensus 351 ~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 351 SRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 456999999999999988764
No 229
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.85 E-value=1.8e-18 Score=172.93 Aligned_cols=314 Identities=15% Similarity=0.140 Sum_probs=193.5
Q ss_pred CCCCCHHHHHHHHHHHHhcCC---CCC------CCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHhHhh-cC
Q 011959 113 IGHADDQVLAALGETMKKGTS---FGA------PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAF-TG 180 (474)
Q Consensus 113 lG~~~p~v~~a~~~~~~~~~~---~~~------~~~~~~~la~~l~~~~~-~-~~~v~~~~sGseA~~~al~~ar~~-~~ 180 (474)
.|..++.+++++.+.+..... .+. ......++.+.++++++ . .+.+++++|+++++..+++..... .+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~ 87 (373)
T cd06453 8 TSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKP 87 (373)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCC
Confidence 355689999999988755311 111 12334567788888875 3 568999999999999999853211 14
Q ss_pred CcEEEEEeCCCCCCchhHHH---hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccC
Q 011959 181 RERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (474)
Q Consensus 181 ~~~ii~~~~~yhg~~~~~~~---~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (474)
+++|++.++.|.+....... ..|..+..++... .+ .-|++++++.+.+ ++++|++..+++
T Consensus 88 g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~l~~---~~~~v~~~~~~~ 150 (373)
T cd06453 88 GDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD-DG-------------QLDLEALEKLLTE---RTKLVAVTHVSN 150 (373)
T ss_pred CCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC-CC-------------CcCHHHHHHHhcC---CceEEEEeCccc
Confidence 56788777666553222111 2232222111110 00 0178999998864 578888888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehh--hhcCCCcceEEEEecHHHHHhh
Q 011959 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMV 335 (474)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~s--K~l~~G~~iG~~~~~~~i~~~~ 335 (474)
++|.+.+ +++|.++|++||++||+|++|+.... ........+|++++| |.+++ .++|++++++++++.+
T Consensus 151 ~tG~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~~~~ 221 (373)
T cd06453 151 VLGTINP----VKEIGEIAHEAGVPVLVDGAQSAGHM----PVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELLEEM 221 (373)
T ss_pred ccCCcCC----HHHHHHHHHHcCCEEEEEhhhhcCce----eeeccccCCCEEEeccccccCC-CCcEEEEEchHHhhcC
Confidence 8999998 89999999999999999999952111 111112356888776 99986 6689999999988877
Q ss_pred cCCCCcc------------------cccCCCCChHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHhhhcCCe
Q 011959 336 APAGPMY------------------QAGTLSGNPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHA 394 (474)
Q Consensus 336 ~~~~~~~------------------~~~t~~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (474)
.+..... .+...+.|..++.+..++++.+.+.+ ..++.+++.+++++.|+++. ...+.
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~-~~~~~ 300 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIP-GVRVY 300 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC-CeEEe
Confidence 6321000 00111234445555566777766533 44555555566666555431 01111
Q ss_pred eEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------------CcceEEec--CCcHHHH
Q 011959 395 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------FEAGFTSL--AHSSDDI 460 (474)
Q Consensus 395 ~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------------~~~~~~~~--~~t~e~i 460 (474)
......+.++.+.+... ...++.+.|.++||.+.++. ...+|+++ .+|++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~--------------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di 366 (373)
T cd06453 301 GDAEDRAGVVSFNLEGI--------------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEI 366 (373)
T ss_pred CCccccCCeEEEEECCc--------------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHH
Confidence 11122355666655321 12578889899999987543 23567764 4699999
Q ss_pred HHHHHHH
Q 011959 461 QHTITAA 467 (474)
Q Consensus 461 ~~~l~~l 467 (474)
|++++.|
T Consensus 367 ~~~~~~l 373 (373)
T cd06453 367 DALVEAL 373 (373)
T ss_pred HHHHhhC
Confidence 9999864
No 230
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.85 E-value=2.1e-18 Score=173.93 Aligned_cols=323 Identities=13% Similarity=0.143 Sum_probs=193.2
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-CC--CCC-----CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SF--GAP-----CLLENVLAEMVISAVP-SIEMVRFVNSGTEACM 169 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~--~~~-----~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~ 169 (474)
..|+|..+. |..++.+++++.+.+.... .. .++ .+...++.+.++++++ ..+.+++++|+++++.
T Consensus 18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 367775443 3468999999999886521 11 121 2345788888888886 3457999999999988
Q ss_pred HHHHHhHh-hcCCcEEEEEeCCCCCCchhH---HHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCC
Q 011959 170 GVLRLARA-FTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 245 (474)
Q Consensus 170 ~al~~ar~-~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 245 (474)
.++..... ..++++|++.++.|++..... ....|..+..++.....+ ..|++++++.+..
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~-------------~~~~~~l~~~i~~--- 155 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATG-------------ELHPDDLASLLSP--- 155 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCC-------------CcCHHHHHHhcCC---
Confidence 77764322 334577887776666543322 122343322211110001 0178899988863
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhcCCCcceE
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVG 323 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG 323 (474)
++++|+++.+++++|.+.+ +++|.++|++||+++|+||+|.. ... ..... ...+|++ +++|.+| +|+|
T Consensus 156 ~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~-~~~-~~~~~--~~~~d~~~~s~~K~~g--~~~G 225 (397)
T TIGR01976 156 RTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHYA-PHG-LIDVQ--ATGADFLTCSAYKFFG--PHMG 225 (397)
T ss_pred CceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhhc-ccc-CCCHH--HcCCCEEEEechhhcC--CceE
Confidence 5788888888899999988 99999999999999999999941 111 11112 2245655 6889884 5799
Q ss_pred EEEecHHHHHhhcCCCCccccc-------CCCCChHHHHHHHHHHHHhcCCC-------------HHHHHHHHHHHHHHH
Q 011959 324 AYGGRRDIMEMVAPAGPMYQAG-------TLSGNPLAMTAGIHTLKRLKEPG-------------TYEYLNKITGELTQG 383 (474)
Q Consensus 324 ~~~~~~~i~~~~~~~~~~~~~~-------t~~~~~~~~aaa~aal~~~~~~~-------------~~~~~~~~~~~l~~~ 383 (474)
++++++++++.+.+....+... ..+.|...+++..++++.+.+.+ ..+.+.++...+.+.
T Consensus 226 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (397)
T TIGR01976 226 ILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEY 305 (397)
T ss_pred EEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999988776421111111 11234445555556676654321 123333333334444
Q ss_pred HHHHhhhcC-CeeEE----eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEeccc--------------
Q 011959 384 IIDAGKKAG-HAICG----GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS-------------- 444 (474)
Q Consensus 384 L~~~~~~~~-~~~~v----~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------------- 444 (474)
|.+.+.+.+ +.... ...+.++.+.+.. ....++.+.|.++||++..+
T Consensus 306 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~ 371 (397)
T TIGR01976 306 LLVGLSDLPGVTLYGVARLAARVPTVSFTVHG--------------LPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLN 371 (397)
T ss_pred HHHHHhcCCCEEEeCCCCccCCCceEEEEeCC--------------cCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCC
Confidence 433332333 11111 1134444444321 11256888899999999754
Q ss_pred -CCcceEEe--cCCcHHHHHHHHHHH
Q 011959 445 -QFEAGFTS--LAHSSDDIQHTITAA 467 (474)
Q Consensus 445 -~~~~~~~~--~~~t~e~i~~~l~~l 467 (474)
....+|++ ..+|++|++++++.|
T Consensus 372 ~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 372 DEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 12246764 567999999999864
No 231
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.85 E-value=9.9e-19 Score=173.87 Aligned_cols=328 Identities=13% Similarity=0.079 Sum_probs=190.8
Q ss_pred cCCCCCHHHHHHHHHHHHhc--CC--CCC----CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcE
Q 011959 112 IIGHADDQVLAALGETMKKG--TS--FGA----PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 183 (474)
Q Consensus 112 ~lG~~~p~v~~a~~~~~~~~--~~--~~~----~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ 183 (474)
.-|+..|.+++++.+.-... .+ .+. ..+...++.+.+++++ +.+++++++|+++++..+++. ...++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~~i~~~~g~t~al~~~l~~--~~~~gd~ 85 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL-GMDEARVTPGAREGKFAVMHS--LCEKGDW 85 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc-CCceEEEeCCHHHHHHHHHHH--hcCCCCE
Confidence 34566888888888876331 11 111 1345678888888888 458999999999999999984 2334566
Q ss_pred EEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC----CCeEEEEEccccCCC
Q 011959 184 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK----GEIAAIILEPVVGNS 259 (474)
Q Consensus 184 ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~----~~~a~vi~ep~~~~~ 259 (474)
|++...+|++.. ..+...|..+..++...... + .-|++++++.+++.. .++++|+++.+++++
T Consensus 86 Vl~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~---------~---~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~t 152 (361)
T cd06452 86 VVVDGLAHYTSY-VAAERAGLNVREVPNTGHPE---------Y---HITPEGYAEVIEEVKDEFGKPPALALLTHVDGNY 152 (361)
T ss_pred EEEcCCcchHHH-HHHHhcCCEEEEEecCCCCC---------c---ccCHHHHHHHHHHHhhccCCCceEEEEECCCCCC
Confidence 776655555533 33333444332221110000 0 117899998886421 257788887777888
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCC
Q 011959 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG 339 (474)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~ 339 (474)
|.+.+ +++|.++|++||+++|+||+|..-. ..+....++....+.+++|++++|.|+|++++++++++.+....
T Consensus 153 G~~~~----~~~i~~~~~~~~~~vivD~a~~~g~--~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~ 226 (361)
T cd06452 153 GNLHD----AKKIAKVCHEYGVPLLLNGAYTVGR--MPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTS 226 (361)
T ss_pred eeecc----HHHHHHHHHHcCCeEEEECCcccCC--cCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccc
Confidence 98877 9999999999999999999995111 01222233443334478999987779999999999998886432
Q ss_pred Ccc-------cccCCCCChHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCeeE--EeeeceeEEEEEe
Q 011959 340 PMY-------QAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAIC--GGYISGMFGFFFT 409 (474)
Q Consensus 340 ~~~-------~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--v~~~g~~~~i~~~ 409 (474)
..+ .+++ .++..+.++.++++.+.+ -..+.+..++.+++++.|+++. ++... ..+...++.+...
T Consensus 227 ~~~~~~~~~~~~~~--~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~---g~~v~~~~~~~~n~~~~~~~ 301 (361)
T cd06452 227 QMFKIKEVELLGCT--LRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIE---GIKQLGEKPKNHDLMFFETP 301 (361)
T ss_pred cccccceeeeeccc--cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEECCCCCCCceEEEEcC
Confidence 211 1111 122334455555654322 1122222233456666665431 21110 0122333333321
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-cceEEe-cCCcHHHHHHHHHHHHHHH
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTS-LAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~~~~~-~~~t~e~i~~~l~~l~~~~ 471 (474)
.+............++.+.|+++||++...+. ..+|+. ..+++|+++.++++|+++.
T Consensus 302 -----~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 302 -----SFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred -----CcchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 00000000001123588999999999654333 234553 3579999999999998764
No 232
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.85 E-value=1.1e-18 Score=174.43 Aligned_cols=311 Identities=16% Similarity=0.151 Sum_probs=191.9
Q ss_pred CCHHHHHHHHHHHHhc--CC--CCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhh----cCCcEEEE
Q 011959 116 ADDQVLAALGETMKKG--TS--FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF----TGRERIIK 186 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~--~~--~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~----~~~~~ii~ 186 (474)
.+|.+.+++.+.+... .. +........++.++++++++ ..+.+++++||++++..++..++.. .+++.|++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~ 111 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIV 111 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 6778888887765442 11 11223556888999999886 3457889999999999998765432 23357777
Q ss_pred EeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCH
Q 011959 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (474)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (474)
.+++|+.+ .......|..+..++... .+ ..|++++++.++++ ..+.+++.| ++++|.+.+
T Consensus 112 ~~~~h~~~-~~~~~~~G~~~~~v~~~~-~~-------------~~d~~~l~~~l~~~--~~~vv~~~~-~~~tG~~~~-- 171 (373)
T TIGR03812 112 PESAHFSF-EKAAEMLGLELRYAPLDE-DY-------------TVDVKDVEDLIDDN--TIGIVGIAG-TTELGQIDD-- 171 (373)
T ss_pred CCcchHHH-HHHHHHcCCeEEEEeeCC-CC-------------CcCHHHHHHHHhhC--cEEEEEECC-CCCCCccCC--
Confidence 76666543 223333343222211110 00 12799999988743 345566665 567899888
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-cc-CCCc-cccccC---CCCceee--hhhhcCCCcceEEEE-ecHHHHHhhcC
Q 011959 267 DFLNAIRRITKENGALLIFDEVMTGF-RL-AYGG-AQEYFG---VTPDLTT--LGKIIGGGLPVGAYG-GRRDIMEMVAP 337 (474)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r~-g~~~-~~~~~g---~~pdi~t--~sK~l~~G~~iG~~~-~~~~i~~~~~~ 337 (474)
+++|.++|++||+++|+|++|.++ .. ..++ ...... ...|.++ ..|...+++|.|+++ .++++++.+..
T Consensus 172 --~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~ 249 (373)
T TIGR03812 172 --IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSV 249 (373)
T ss_pred --HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhcc
Confidence 999999999999999999999755 21 1110 000111 1235444 347433567888764 67888777642
Q ss_pred CCCcccccC------CCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEE
Q 011959 338 AGPMYQAGT------LSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (474)
Q Consensus 338 ~~~~~~~~t------~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (474)
..+ +.... .+.++..++++.++|+.+.+ ++..+++.++.+++++.|+++ +......+...++.+.+
T Consensus 250 ~~~-~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v~~~~ 324 (373)
T TIGR03812 250 DAP-YLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI----GFEPVIEPVLNIVAFEV 324 (373)
T ss_pred cCc-ccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEcCCCceEEEEEe
Confidence 212 11111 13345677788888887754 346777888888888888764 22211222333433333
Q ss_pred ecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-CcceEEe--cCCcHHHHHHHHHHHHH
Q 011959 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTS--LAHSSDDIQHTITAAEK 469 (474)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~~~--~~~t~e~i~~~l~~l~~ 469 (474)
. + ...+.+.|.++||++.... ...+|++ ..+|++|+++++++|++
T Consensus 325 ~-------------~---~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 325 D-------------D---PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred C-------------C---HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 1 1 1468888999999998763 3456774 55899999999999975
No 233
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.85 E-value=8.2e-19 Score=168.10 Aligned_cols=323 Identities=19% Similarity=0.185 Sum_probs=202.7
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCC----------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAP----------CLLENVLAEMVISAVP-SIEMVRFVNSGTEAC 168 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~----------~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~ 168 (474)
-|+|..+. .+ -+|+|++++...+... ||.| ....++-.+.+++..+ .+++|+||++|||++
T Consensus 3 iYlD~~AT---Tp---~~~~v~~~m~~~~~~~--fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsn 74 (386)
T COG1104 3 IYLDNAAT---TP---VDPEVLEAMLPYLTEV--FGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESN 74 (386)
T ss_pred cccccccc---CC---CCHHHHHHHHHHHHhh--cCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHH
Confidence 47887765 22 4799999999998763 2222 2334455666777776 568999999999999
Q ss_pred HHHHHHh-Hhhc---CCcEEEEEeCCCCCCchhHHHhc---CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHh
Q 011959 169 MGVLRLA-RAFT---GRERIIKFEGCYHGHADPFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 241 (474)
Q Consensus 169 ~~al~~a-r~~~---~~~~ii~~~~~yhg~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~ 241 (474)
..||+-+ .++. +++.||+ ...=|-.....+... |..+-.++ +...|.. |+++|+++|+
T Consensus 75 NlaI~g~~~a~~~~~~~~HIIt-s~iEH~aVl~~~~~Le~~g~~Vtyl~-V~~~G~v-------------~~e~L~~al~ 139 (386)
T COG1104 75 NLAIKGAALAYRNAQKGKHIIT-SAIEHPAVLNTCRYLERQGFEVTYLP-VDSNGLV-------------DLEQLEEALR 139 (386)
T ss_pred HHHHHhhHHhhhcccCCCeEEE-cccccHHHHHHHHHHHhcCCeEEEeC-CCCCCeE-------------cHHHHHHhcC
Confidence 9999953 2222 2345554 445555444433322 32222211 1222321 8999999998
Q ss_pred cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehh--hhcCCC
Q 011959 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGG 319 (474)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~s--K~l~~G 319 (474)
+++.+|.+.-+||+.|.+.| +++|.++|+++|+++++|-||. .|+ ...+......|+++|| |-.| .
T Consensus 140 ---~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa---~Gk-ipi~~~~~~vD~ls~SaHK~~G-p 207 (386)
T COG1104 140 ---PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA---VGK-IPIDLEELGVDLLSFSAHKFGG-P 207 (386)
T ss_pred ---CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh---cCc-eeccccccCcceEEeehhhccC-C
Confidence 46899999999999999999 9999999999999999999996 232 1122222236899887 4443 2
Q ss_pred cceEEEEecHHHH-HhhcCC---CCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011959 320 LPVGAYGGRRDIM-EMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGH 393 (474)
Q Consensus 320 ~~iG~~~~~~~i~-~~~~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~ 393 (474)
=.+|+++.++.+. +.+... .+....+| .|..+.++..+|+++..+ +....++.+++++|.+.|.+.....-+
T Consensus 208 kGiGaLyv~~~~~~~p~i~GGgQE~g~RsGT--env~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~ 285 (386)
T COG1104 208 KGIGALYVRPGVRLEPLIHGGGQERGLRSGT--ENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYL 285 (386)
T ss_pred CceEEEEECCCCccCceeccCcCCCCCCCCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 2499998766542 111111 01122233 355666666677776544 566777778888888888765322111
Q ss_pred eeE-EeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-----------------------cce
Q 011959 394 AIC-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAG 449 (474)
Q Consensus 394 ~~~-v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----------------------~~~ 449 (474)
... .......+.+.|..- ..+.+...|-.+||.+..+.. ..+
T Consensus 286 ~g~~~~rlP~~~~~~f~gv--------------~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~si 351 (386)
T COG1104 286 NGDDEPRLPNILNFSFPGV--------------EGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSI 351 (386)
T ss_pred cCCcccCCCCeEEEEeCCC--------------cHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccE
Confidence 111 122333444444321 124556666677999876531 124
Q ss_pred EEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 450 FTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 450 ~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
|++ ...|++|+|.+++.|.+++++
T Consensus 352 R~S~g~~tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 352 RFSLGRFTTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 665 455999999999999999875
No 234
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.85 E-value=1.9e-18 Score=172.45 Aligned_cols=317 Identities=17% Similarity=0.165 Sum_probs=195.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCC---CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCC
Q 011959 116 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~---~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (474)
..+.+.+++.+... .......+...++.+.+++.++. .+.+++++||+++++.++... ...++++++.+.+|+
T Consensus 16 ~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l--~~~~~~vlv~~~~~~ 91 (368)
T PRK13479 16 TSRTVREAMLRDWG--SWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL--VPRDGKVLVPDNGAY 91 (368)
T ss_pred CCHHHHHHhCCCCC--CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc--cCCCCeEEEEeCCch
Confidence 46677777655431 11101224567888888888763 245889999999999999852 345678888887777
Q ss_pred CCch-hHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHH
Q 011959 193 GHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 271 (474)
Q Consensus 193 g~~~-~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~ 271 (474)
+... ......|..+..++..... ..|++++++.+++++ ++++|.+..+++++|.+.| +++
T Consensus 92 ~~~~~~~~~~~g~~~~~i~~~~~~--------------~~d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~----~~~ 152 (368)
T PRK13479 92 GARIAQIAEYLGIAHVVLDTGEDE--------------PPDAAEVEAALAADP-RITHVALVHCETTTGILNP----LDE 152 (368)
T ss_pred HHHHHHHHHHcCCcEEEEECCCCC--------------CCCHHHHHHHHHhCC-CCcEEEEEcccCccccccC----HHH
Confidence 6532 2223334433222111100 127999999887542 4566667677778999998 899
Q ss_pred HHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcc-------
Q 011959 272 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY------- 342 (474)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~------- 342 (474)
|.++|+++|+++|+|++|. |. ....... ...+|++ +++|++.+...+|++++++++++.+......+
T Consensus 153 i~~l~~~~~~~livDa~~~-~g-~~~~~~~--~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 228 (368)
T PRK13479 153 IAAVAKRHGKRLIVDAMSS-FG-AIPIDIA--ELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQ 228 (368)
T ss_pred HHHHHHHcCCEEEEEcccc-cC-Ccccccc--ccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHH
Confidence 9999999999999997773 31 1111122 2235654 68898865444799999999888776421110
Q ss_pred -------cccCCCCChHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEe---eeceeEEEEE
Q 011959 343 -------QAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFFF 408 (474)
Q Consensus 343 -------~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~---~~g~~~~i~~ 408 (474)
....|+.|...+.+..++++.+.+ ++..+++.++.+++++.|+++ ++..... .......+.+
T Consensus 229 ~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~ 304 (368)
T PRK13479 229 WAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL----GFEPLLDAEIQSPIIVTFHA 304 (368)
T ss_pred HhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc----CCcccCCchhcCceEEEEEC
Confidence 111245666677777777876644 234455666666666666554 3211101 1111222222
Q ss_pred ecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC---cceEEec--CCcHHHHHHHHHHHHHHHhhC
Q 011959 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---EAGFTSL--AHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~~~~--~~t~e~i~~~l~~l~~~~~~~ 474 (474)
...+ .....++.+.|.++||.+.++.. ..+|++. ..+++|++++++.|+++++++
T Consensus 305 ~~~~-----------~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 305 PADP-----------AYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CCCC-----------CcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1110 01125788899999999987632 3578854 349999999999999998753
No 235
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.84 E-value=2.8e-18 Score=173.30 Aligned_cols=326 Identities=17% Similarity=0.178 Sum_probs=201.0
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCC-CCC------CHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSF-GAP------CLLENVLAEMVISAVP-S-IEMVRFVNSGTEAC 168 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~-~~~------~~~~~~la~~l~~~~~-~-~~~v~~~~sGseA~ 168 (474)
.|+|..+. |..++.+.+++.+.+... ... +.. .....++.+.++++++ . .+.+++++|+++++
T Consensus 20 ~yld~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAAT------SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI 93 (403)
T ss_pred EEEeCccc------cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence 57775433 446788999998877642 111 111 1234577788888876 3 46899999999999
Q ss_pred HHHHHHhH--hhcCCcEEEEEeCCCCCCchhHH---HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC
Q 011959 169 MGVLRLAR--AFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 243 (474)
Q Consensus 169 ~~al~~ar--~~~~~~~ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~ 243 (474)
..+++... ....++.|++.+..|++...... ...|..+..++.. ..+ .-|++++++.+.+
T Consensus 94 ~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~-~~~-------------~~~~~~l~~~i~~- 158 (403)
T TIGR01979 94 NLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD-DDG-------------TLDLDDLEKLLTE- 158 (403)
T ss_pred HHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC-CCC-------------CCCHHHHHHHhcc-
Confidence 98887431 13446677777766665432221 1223322211111 001 0178899888863
Q ss_pred CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhcCCCcc
Q 011959 244 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLP 321 (474)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~ 321 (474)
++++|++..+++++|.+.| +++|.++|++||+++|+|++|.... ....... ..+|++ +++|.+|+ ..
T Consensus 159 --~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~g~--~~~~~~~--~~~d~~~~s~~K~~gp-~G 227 (403)
T TIGR01979 159 --KTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQAVPH--MPVDVQA--LDCDFYVFSGHKMYGP-TG 227 (403)
T ss_pred --CCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhhcCc--cccCccc--cCCCEEEEecccccCC-CC
Confidence 5788888888888999999 9999999999999999999995210 0111122 245665 67898762 23
Q ss_pred eEEEEecHHHHHhhcCCCCc------------------ccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHH
Q 011959 322 VGAYGGRRDIMEMVAPAGPM------------------YQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGEL 380 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~------------------~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l 380 (474)
+|++++++++++.+.+.... ..+..-+.+...+.+..++++.+.+ +...++..++.+++
T Consensus 228 ~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l 307 (403)
T TIGR01979 228 IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYA 307 (403)
T ss_pred ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 89999999887766421000 0000113455566777778877654 34556666666666
Q ss_pred HHHHHHHhhhcCCeeEEe----eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----------
Q 011959 381 TQGIIDAGKKAGHAICGG----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------- 445 (474)
Q Consensus 381 ~~~L~~~~~~~~~~~~v~----~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------- 445 (474)
++.|+++. ++....+ ..+.++.+.+... ...++.+.|.++||.+..+.
T Consensus 308 ~~~l~~~~---g~~~~~~~~~~~~~~~v~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~ 370 (403)
T TIGR01979 308 LERLGEIP---GLRIYGPRDAEDRGGIISFNVEGV--------------HPHDVGTILDEEGIAVRSGHHCAQPLMRRFG 370 (403)
T ss_pred HHHHhcCC---CEEEeCCCCccccCceEEEEeCCc--------------CHHHHHHHHhhCCEEEcchhhhhHHHHHHhC
Confidence 66665431 1111111 1255666655321 12457778889999987542
Q ss_pred -CcceEEec--CCcHHHHHHHHHHHHHHHhhC
Q 011959 446 -FEAGFTSL--AHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 446 -~~~~~~~~--~~t~e~i~~~l~~l~~~~~~~ 474 (474)
...+|+++ ..|++|+++++++|+++++.+
T Consensus 371 ~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 371 VPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 23467754 459999999999999987753
No 236
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.84 E-value=1.2e-17 Score=168.64 Aligned_cols=326 Identities=15% Similarity=0.157 Sum_probs=203.6
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--C-CCCC------CHHHHHHHHHHHhhCC--CCCeEEEeCCHHH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--S-FGAP------CLLENVLAEMVISAVP--SIEMVRFVNSGTE 166 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~-~~~~------~~~~~~la~~l~~~~~--~~~~v~~~~sGse 166 (474)
+..|+|..+. +..++.|++++.+.+.... . .+.. .+...++.+.++++++ ..++|+|++|+++
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 3468886654 3357889999998886521 1 1111 2345577788888885 3579999999999
Q ss_pred HHHHHHHHhH--hhcCCcEEEEEeCCCCCCchhHHH---hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHh
Q 011959 167 ACMGVLRLAR--AFTGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 241 (474)
Q Consensus 167 A~~~al~~ar--~~~~~~~ii~~~~~yhg~~~~~~~---~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~ 241 (474)
++..+++... ...++++||+.+..||+....... ..|..+..++... .+ ..|+++|++.++
T Consensus 97 ~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~-------------~~d~~~l~~~i~ 162 (406)
T PRK09295 97 GINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP-DG-------------TLQLETLPALFD 162 (406)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CC-------------CCCHHHHHHhcC
Confidence 9998887421 224457888888777765433222 1233222211110 01 017899998886
Q ss_pred cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceee--hhhhcCCC
Q 011959 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTT--LGKIIGGG 319 (474)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t--~sK~l~~G 319 (474)
. ++++|++..+++++|.+.| +++|.++|++||+++|+|++|.-... ..... ...+|+++ ++|.+|+
T Consensus 163 ~---~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~~g~~--~~~~~--~~~~D~~~~s~~K~~gp- 230 (406)
T PRK09295 163 E---RTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQAVMHH--PVDVQ--ALDCDFYVFSGHKLYGP- 230 (406)
T ss_pred C---CcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccccCcc--ccCch--hcCCCEEEeehhhccCC-
Confidence 3 5788888888889999999 99999999999999999999952111 11122 23457664 5697662
Q ss_pred cceEEEEecHHHHHhhcCCCC---c----------------ccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHH
Q 011959 320 LPVGAYGGRRDIMEMVAPAGP---M----------------YQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKIT 377 (474)
Q Consensus 320 ~~iG~~~~~~~i~~~~~~~~~---~----------------~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~ 377 (474)
-.+|++++++++++.+.+... . ..+.+-+.|..++.+..++++.+.+ +...++.+++.
T Consensus 231 ~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 310 (406)
T PRK09295 231 TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLM 310 (406)
T ss_pred CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 238999999998776542100 0 0011124567778888888988765 34455566666
Q ss_pred HHHHHHHHHHhhhcCCeeEEe-eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----------
Q 011959 378 GELTQGIIDAGKKAGHAICGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------- 445 (474)
Q Consensus 378 ~~l~~~L~~~~~~~~~~~~v~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------- 445 (474)
+++++.|.++. ++....+ ....++.+.+... ...++.+.|.++||.++.+.
T Consensus 311 ~~l~~~l~~~~---~~~~~~~~~~~~iv~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~ 373 (406)
T PRK09295 311 HYALSQLESVP---DLTLYGPQNRLGVIAFNLGKH--------------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYN 373 (406)
T ss_pred HHHHHHHhcCC---CEEEeCCCCCceEEEEEECCc--------------CHHHHHHHHHhCCeEEeccccchHHHHHHHC
Confidence 66666665431 1111111 1234445444211 12456777888999986542
Q ss_pred -CcceEEe--cCCcHHHHHHHHHHHHHHHh
Q 011959 446 -FEAGFTS--LAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 446 -~~~~~~~--~~~t~e~i~~~l~~l~~~~~ 472 (474)
...+|++ ...|++|||++++.|+++..
T Consensus 374 ~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 374 VPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 1246775 45699999999999988754
No 237
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.83 E-value=1.8e-18 Score=173.98 Aligned_cols=318 Identities=14% Similarity=0.089 Sum_probs=199.4
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCC
Q 011959 117 DDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 194 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~-~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~ 194 (474)
+++|++++.+..... ......+...+++++++++++ . .+.+++++||+++++.++.. .+.++++|++.+.+|++.
T Consensus 21 ~~~V~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~--~~~~Gd~Vlv~~~~~~~~ 97 (401)
T PLN02409 21 PERVLRAMNRPNEDH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTN--TLSPGDKVVSFRIGQFSL 97 (401)
T ss_pred CHHHHHHhcCCCCCC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHh--cCCCCCEEEEeCCCchhH
Confidence 566666664432110 001124567788888888876 2 35789999999999999874 345678899998777764
Q ss_pred chhH-HHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC-CCeEEEEEccccCCCCcccCCHHHHHHH
Q 011959 195 ADPF-LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAI 272 (474)
Q Consensus 195 ~~~~-~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l 272 (474)
.... +...|..+..++.+...+ -|++++++.++.++ +++++|++..+.+.+|.+.| +++|
T Consensus 98 ~~~~~~~~~g~~v~~v~~~~~~~--------------~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~----~~~i 159 (401)
T PLN02409 98 LWIDQMQRLNFDVDVVESPWGQG--------------ADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND----LAGV 159 (401)
T ss_pred HHHHHHHHcCCceEEEECCCCCC--------------CCHHHHHHHHhhCcCCCccEEEEEeecccccccCC----HHHH
Confidence 3211 222343332221111111 17899999998532 26788888888888999999 8888
Q ss_pred HHH--HHHhCCEEEEeccccCcccCC-CccccccCCCCcee--ehhhhcCCCcceEEEEecHHHHHhhcCCCC--ccc--
Q 011959 273 RRI--TKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGP--MYQ-- 343 (474)
Q Consensus 273 ~~l--~~~~g~llI~DEv~~g~r~g~-~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~--~~~-- 343 (474)
.++ |++||+++|+|++++ + |. ....+.++ .|++ +.+|+|+++.++|+++.++++++.+.+... .+.
T Consensus 160 ~~l~~~~~~g~~~vvD~v~s-~--g~~~id~~~~~--~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
T PLN02409 160 RKLLDCAQHPALLLVDGVSS-I--GALDFRMDEWG--VDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDW 234 (401)
T ss_pred HHHHhhhccCcEEEEEcccc-c--CCccccccccC--ccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCH
Confidence 888 999999999999996 2 11 11122233 4555 578999866679999999999888764211 110
Q ss_pred --------cc---CCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEe
Q 011959 344 --------AG---TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (474)
Q Consensus 344 --------~~---t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (474)
.+ .++.|...+.+..++++.+.+ +...++.+++.+++++.|+++..+.-....-...+.+.++.+.
T Consensus 235 ~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p 314 (401)
T PLN02409 235 ADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVP 314 (401)
T ss_pred HHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCC
Confidence 11 234555667777888887654 4566677777777777776542111000000011223334332
Q ss_pred cCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC----CcceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
. .....++.+.|. ++||.+.++. ...+|++ ...+++++..++++|++++.+
T Consensus 315 ~-------------~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 315 E-------------GIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred C-------------CCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 111245666665 6699998763 2346774 455999999999999999875
No 238
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=2.2e-18 Score=161.69 Aligned_cols=323 Identities=21% Similarity=0.219 Sum_probs=199.3
Q ss_pred EeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCC
Q 011959 102 IDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR 181 (474)
Q Consensus 102 iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~ 181 (474)
+||.|. +.-| .+|++++++.++-..+..-++.++...++.+++++.+ +.+.++|++|||.||..+|. .++++
T Consensus 2 ~~f~SD---n~~g-~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~-g~~a~~Fv~sGT~aN~lal~---~~~~~ 73 (342)
T COG2008 2 IDFRSD---NVAG-PTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELF-GKEAALFVPSGTQANQLALA---AHCQP 73 (342)
T ss_pred CccccC---ccCC-CCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHh-CCceEEEecCccHHHHHHHH---HhcCC
Confidence 466665 3333 7999999998876443333446777888999999988 55999999999999999999 66677
Q ss_pred cEEEEEeCCCCCCchhH--HHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc---CCCCeEEEEEcccc
Q 011959 182 ERIIKFEGCYHGHADPF--LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVV 256 (474)
Q Consensus 182 ~~ii~~~~~yhg~~~~~--~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~ 256 (474)
...++....-|-..+.+ ....+.+......+...|.. ++++++..+.. +...+..+++|...
T Consensus 74 ~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gkl-------------t~e~v~~~i~~~d~~~~~~~~~~~e~~~ 140 (342)
T COG2008 74 GESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKL-------------TPEDVEAAIRPDDIHHAPTPLAVLENTA 140 (342)
T ss_pred CCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCc-------------CHHHHHHhhcCCCcccCCCceEEEeecc
Confidence 77777766666554322 22222111111111122221 79999987773 12245666666666
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC--c-ccCCCccccccCCCCcee--ehhhhcCCCcceEEE-EecHH
Q 011959 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG--F-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRRD 330 (474)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g--~-r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~-~~~~~ 330 (474)
+++|.+.|.++ |++|.++|++||+.|.+|-+.-. . -.+ -....+.-..|++ ++||.+ |+|+|++ +++++
T Consensus 141 te~GtVy~l~e-l~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v~~~~tK~g--~~~~gAiv~gn~~ 215 (342)
T COG2008 141 TEGGTVYPLDE-LEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSVSFCLTKGG--GAPVGAIVFGNRD 215 (342)
T ss_pred CCCceecCHHH-HHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEEEEecccCC--cceeeeEEEcCHH
Confidence 68888877666 99999999999999999965521 1 111 1111222234666 456654 5689998 78888
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHH----HHHHHHHHHHHHHhhhcCCeeEEeeeceeEEE
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN----KITGELTQGIIDAGKKAGHAICGGYISGMFGF 406 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~----~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i 406 (474)
+++.++...+. .++-++..-+..++++.+|+ +++..... ++.++|.+.|+.. .+.....+...+++.+
T Consensus 216 ~~~~a~~~rK~-~Ggl~~k~r~laA~~~~~l~----~~~~~~~~~Han~mA~~La~~~~~~---~G~~~~~~~~tN~vf~ 287 (342)
T COG2008 216 FAKRARRWRKR-AGGLMRKARFLAAQGLYALE----DDVWRLAADHANAMAARLAEGLEAK---PGVKLAFPVETNMVFV 287 (342)
T ss_pred HHHHHHHHHHH-hcccHhhhhHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHhhhhc---CCceeccCCcccEEEE
Confidence 88777632222 23334444555566666664 33332222 3355555555532 2333333455666666
Q ss_pred EEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHHH
Q 011959 407 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~~ 471 (474)
.+.+. ..........+..+|+++.+.+ ..+|+ +...|+++++++++.+++++
T Consensus 288 ~l~~~------------~i~~l~~~~~~~~~~~~~~~~~-~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 288 RLPES------------AIEALRLAGALFYRGVLIGAHG-EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ECChH------------HHHHHHhhchhheeeeeccCCC-ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 55321 0112334455667788877765 33444 78999999999999998764
No 239
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.83 E-value=2e-17 Score=163.87 Aligned_cols=320 Identities=13% Similarity=0.105 Sum_probs=192.5
Q ss_pred EEEeccCChhhccCCCC--CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHh
Q 011959 100 EYIDYVGSWGPAIIGHA--DDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA 177 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~ 177 (474)
.+|+..+-+ .+||-+ +++|++++.+.++. +....++..++++++++++ +.+++++++|+++|+..+++..
T Consensus 9 ~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~a~~~-g~~~~~~~~g~t~al~~al~al-- 80 (363)
T TIGR01437 9 KVINASGKM--TILGVSTVSDEVADAQKRGAQN---YFEIKELVNKTGEYIANLL-GVEDAVIVSSASAGIAQSVAAV-- 80 (363)
T ss_pred eEEECCcEe--ecCCCCCCCHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHhh-CCCeEEEEcCHHHHHHHHHHHH--
Confidence 455544433 567764 89999999998765 3345677889999999988 5678999999999999999853
Q ss_pred hcCCc---------------EEEEEeCCCCCCc---hhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHH
Q 011959 178 FTGRE---------------RIIKFEGCYHGHA---DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENL 239 (474)
Q Consensus 178 ~~~~~---------------~ii~~~~~yhg~~---~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~ 239 (474)
..+++ +||+..+.|+.+. ...+...|..+...+. . ..-|++++++.
T Consensus 81 ~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~---~-------------~~~d~~~le~a 144 (363)
T TIGR01437 81 ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY---A-------------NECSAEQLEAA 144 (363)
T ss_pred hcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC---C-------------CCCCHHHHHHh
Confidence 22333 7777665554321 2233333432211110 0 01289999999
Q ss_pred HhcCCCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhc
Q 011959 240 FENNKGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKII 316 (474)
Q Consensus 240 l~~~~~~~a~vi-~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l 316 (474)
+.. ++++++ +++.++.+|.+.+ +++|.++|++||++||+|++|. +. ......+| .|++ +.+|.+
T Consensus 145 i~~---~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~~---~~~~~~~g--~D~~~~S~~K~l 211 (363)
T TIGR01437 145 ITE---KTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-ED---LQKYYRLG--ADLVIYSGAKAI 211 (363)
T ss_pred cCh---hceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-Cc---hHHHHHcC--CCEEEEeCCccc
Confidence 974 445555 5555566787888 8899999999999999999996 20 00011123 3666 567988
Q ss_pred CCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCe
Q 011959 317 GGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHA 394 (474)
Q Consensus 317 ~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (474)
+ |++.|++++++++++.+...... ....+......+++..++++.+.+ .+..+...++.++++++|.++. ++.
T Consensus 212 ~-gp~~G~l~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~---g~~ 286 (363)
T TIGR01437 212 E-GPTSGLVLGKKKYIEWVKLQSKG-IGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLK---GVS 286 (363)
T ss_pred C-CCceEEEEEcHHHHHHHHhccCC-CcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCC---CeE
Confidence 5 56799999998888776421100 001111122334455556665543 4455555566667777776641 111
Q ss_pred eEE--eeece---eEEEEEecCCCcCcccccccchHHHHHHHHHHHHCC--eEeccc--CCcceEEe-cCCcHHHHHHHH
Q 011959 395 ICG--GYISG---MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG--VYFAPS--QFEAGFTS-LAHSSDDIQHTI 464 (474)
Q Consensus 395 ~~v--~~~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~v~~~--~~~~~~~~-~~~t~e~i~~~l 464 (474)
... ...+. ...+.|.... ......++.+.|.++| |+.++. ....+++. .+.+++|++.++
T Consensus 287 ~~~~~~~~~~~~~~~~v~~~~~~----------~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~~~~~e~~~~~ 356 (363)
T TIGR01437 287 ASIVQDEAGRDIARAEIRFDESE----------LGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRSVTGGQLDIIV 356 (363)
T ss_pred EEEecCCCCCcCceEEEEEeccC----------CCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeecCCHHHHHHHH
Confidence 111 11111 1122222100 0112367888888777 777642 22345552 356799999999
Q ss_pred HHHHHHH
Q 011959 465 TAAEKVL 471 (474)
Q Consensus 465 ~~l~~~~ 471 (474)
++|++++
T Consensus 357 ~~l~~~~ 363 (363)
T TIGR01437 357 ERIREIV 363 (363)
T ss_pred HHHHHhC
Confidence 9998763
No 240
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.82 E-value=1.4e-17 Score=168.21 Aligned_cols=321 Identities=16% Similarity=0.050 Sum_probs=187.1
Q ss_pred CCCCCHHHHHHHHHHHHhc---C--CC-C---CCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcCCc
Q 011959 113 IGHADDQVLAALGETMKKG---T--SF-G---APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRE 182 (474)
Q Consensus 113 lG~~~p~v~~a~~~~~~~~---~--~~-~---~~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~~~ 182 (474)
.|..++.+.+++.+.++.. . .+ . .......++ +.+ +.++ ..++|+|++|+|+++..+++....-.+++
T Consensus 36 ~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~ 113 (406)
T TIGR01814 36 LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKR 113 (406)
T ss_pred cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCc
Confidence 3445788999998776541 1 11 1 111222333 334 5554 46789999999999999988421111123
Q ss_pred EEEEEeCCCCCCchhHHH----hcCCCCcc--CCCCC-CCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011959 183 RIIKFEGCYHGHADPFLV----KAGSGVAT--LGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 183 ~ii~~~~~yhg~~~~~~~----~~g~~~~~--~~~~~-~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
.+|+.+..-|......+. ..|..+.. ...+. ..+ .-|++++++.++...+++++|+++.+
T Consensus 114 ~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g-------------~~~~~~l~~~~~~~~~~t~lv~~~~v 180 (406)
T TIGR01814 114 YKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEE-------------TLRLEDILDTIEKNGDDIAVILLSGV 180 (406)
T ss_pred cEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCC-------------ccCHHHHHHHHHhcCCCeEEEEEecc
Confidence 344455444443322221 12322100 00000 000 01688888888654457899999999
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC-CccccccCCCCceeehhhhcCCCcceEEEEecHHHHHh
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM 334 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~-~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~ 334 (474)
++++|.+.| +++|.++|++||+++|+|++|+. |. ....+.+|++..+.+..|.+.+|.. |+++..++..+.
T Consensus 181 ~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~~---G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~ 252 (406)
T TIGR01814 181 QYYTGQLFD----MAAITRAAHAKGALVGFDLAHAV---GNVPLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHT 252 (406)
T ss_pred ccccceecC----HHHHHHHHHHcCCEEEEEccccc---CCcccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhh
Confidence 999999999 99999999999999999999961 21 2222334444444467799976543 544444333333
Q ss_pred hcCCCCcccc----------c----------CCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhc
Q 011959 335 VAPAGPMYQA----------G----------TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA 391 (474)
Q Consensus 335 ~~~~~~~~~~----------~----------t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (474)
+.+....+.+ . ..+.|..++++..++|+.+.+ +...++.+++.+++++.|+++....
T Consensus 253 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~ 332 (406)
T TIGR01814 253 ERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGP 332 (406)
T ss_pred cCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 3321000000 0 112455677777789998865 4455666667777777666531100
Q ss_pred C-Cee----EEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEec---CCcHHHHHHH
Q 011959 392 G-HAI----CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSL---AHSSDDIQHT 463 (474)
Q Consensus 392 ~-~~~----~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~---~~t~e~i~~~ 463 (474)
+ +.. +....+.++.+.+. . ....+.+.|.++||++.......+|+++ ..|++||+++
T Consensus 333 ~~~~i~~~~~~~~r~~~v~~~~~-~--------------~~~~~~~~L~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l 397 (406)
T TIGR01814 333 PVLTIITPRDHAQRGCQLSLTHP-V--------------PGKAVFQALIKRGVIGDKREPSVIRVAPVPLYNTFVDVYDA 397 (406)
T ss_pred CceEEeCCCChhhcCCeEEEEec-C--------------CHHHHHHHHHHCCEEEeccCCCeEEEechhccCCHHHHHHH
Confidence 1 111 11123445555442 0 1256788888999988755445678864 4599999999
Q ss_pred HHHHHHHH
Q 011959 464 ITAAEKVL 471 (474)
Q Consensus 464 l~~l~~~~ 471 (474)
+++|++++
T Consensus 398 ~~~l~~~~ 405 (406)
T TIGR01814 398 VNVLEEIL 405 (406)
T ss_pred HHHHHHHh
Confidence 99998875
No 241
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.82 E-value=9.4e-18 Score=169.46 Aligned_cols=326 Identities=16% Similarity=0.146 Sum_probs=184.4
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHH-hc-C-----C-CCCC---CHHHHHHHHHHHhhCCCCCeEEEeCCHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMK-KG-T-----S-FGAP---CLLENVLAEMVISAVPSIEMVRFVNSGTEA 167 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~-~~-~-----~-~~~~---~~~~~~la~~l~~~~~~~~~v~~~~sGseA 167 (474)
++.|++..+- ++ -+|.|++++.+.+. +. . . ++.. ..++...++.+++.++.....++.+||++|
T Consensus 19 ~~~~~~~~~~--~~---~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a 93 (402)
T cd00378 19 RETLELIASE--NF---TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQA 93 (402)
T ss_pred HhCeeeeccC--Cc---CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHH
Confidence 3456665442 33 38999999987653 21 1 1 1111 122223445566777522223444579999
Q ss_pred HHHHHHHhHhhcCCcEEEEEeCCCCCCchhH----HHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC
Q 011959 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPF----LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 243 (474)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~----~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~ 243 (474)
+..+++.. ...+++|++.++.|.+..... +...|..+.....+..+ +.. .-|++++++.+...
T Consensus 94 ~~~~l~~l--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~---~id~~~l~~~i~~~ 160 (402)
T cd00378 94 NLAVYFAL--LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDP--------ETG---LIDYDALEKMALEF 160 (402)
T ss_pred HHHHHHHh--cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCc--------ccC---CcCHHHHHHHHHhC
Confidence 99999842 345677888888876543211 11122111111110000 000 01899999988643
Q ss_pred CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCCCCcee--ehhhhcCCC
Q 011959 244 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGG 319 (474)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~~G 319 (474)
++++|++.+.. .|...+ +++|.++|++||++||+||+| .|+ ..|... . .+. ..|++ +++|++ +|
T Consensus 161 --~~~~v~~~~~~--~~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~-~-~~~-~~dv~~~s~sK~l-~G 228 (402)
T cd00378 161 --KPKLIVAGASA--YPRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFP-N-PLP-GADVVTTTTHKTL-RG 228 (402)
T ss_pred --CCCEEEecCcc--cCCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCC-C-ccc-CCcEEEeccccCC-CC
Confidence 35556654332 234445 999999999999999999997 666 333211 1 111 34654 689999 67
Q ss_pred cceEEEEecH-HHHHhhcCCCCcccccCCCC-ChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCe
Q 011959 320 LPVGAYGGRR-DIMEMVAPAGPMYQAGTLSG-NPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHA 394 (474)
Q Consensus 320 ~~iG~~~~~~-~i~~~~~~~~~~~~~~t~~~-~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (474)
+|.||+++++ ++++.+...... +.++. ++..++++..++..... ++..+++.++.+++++.|.+. ++.
T Consensus 229 ~~gg~i~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~ 301 (402)
T cd00378 229 PRGGLILTRKGELAKKINSAVFP---GLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER----GFK 301 (402)
T ss_pred CCceEEEeccHHHHHHHHHHhCc---cccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC----CCe
Confidence 8999998877 888877532111 11222 22333333334443322 455667777777777777664 322
Q ss_pred eE-EeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----------CcceEEec------CCcH
Q 011959 395 IC-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------FEAGFTSL------AHSS 457 (474)
Q Consensus 395 ~~-v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------~~~~~~~~------~~t~ 457 (474)
.. .+..+.++++.+..... ....+.+.|.++||.+.+.. ...+|++. .+++
T Consensus 302 ~~~~~~~~~~v~v~~~~~~~------------~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~ 369 (402)
T cd00378 302 VVSGGTDNHLVLVDLRPKGI------------TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGE 369 (402)
T ss_pred EeecCCCCeEEEEeCCccCC------------CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCH
Confidence 21 12346677776642110 11356667788899996431 23456632 4579
Q ss_pred HHHHHHHHHHHHHHhh
Q 011959 458 DDIQHTITAAEKVLRQ 473 (474)
Q Consensus 458 e~i~~~l~~l~~~~~~ 473 (474)
+|++++++.|.+++++
T Consensus 370 ~di~~~~~~l~~~~~~ 385 (402)
T cd00378 370 EEMEEIADFIARALKD 385 (402)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998753
No 242
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.82 E-value=3.5e-18 Score=170.97 Aligned_cols=351 Identities=14% Similarity=0.051 Sum_probs=191.6
Q ss_pred cCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHh
Q 011959 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLA 175 (474)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~a 175 (474)
..|..||||.+-.++ ..+.++..+++..+...+.......+|.+.+++++ +.+.+++++||++|+..+++
T Consensus 17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~-g~~~vv~t~~Gt~Al~la~~-- 86 (431)
T cd00617 17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLF-GFKHIIPTHQGRGAENILFS-- 86 (431)
T ss_pred CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHH-CCCeEEEcCCHHHHHHHHHH--
Confidence 346678898876432 45666666666554322223334456666677666 67899999999999999998
Q ss_pred HhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC-CHHHHHHHHhcC-CCCeEEEEEc
Q 011959 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENN-KGEIAAIILE 253 (474)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-d~~~le~~l~~~-~~~~a~vi~e 253 (474)
++.+++++|..++.|..+ .......|..+.......... + .....+.+| |+++|++.+++. .+++++|+++
T Consensus 87 -al~~pGD~V~~~~~f~~~-~~~i~~~Ga~pv~v~i~~~~~-~----~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~ 159 (431)
T cd00617 87 -ILLKPGRTVPSNMHFDTT-RGHIEANGAVPVDLVIDEAHD-A----QELIPFKGNIDVAKLEKLIDEVGAENIPYIVLT 159 (431)
T ss_pred -HhCCCCCEEccCCcccch-HHHHHhCCCEeEEEecccccc-c----ccccCCCCCcCHHHHHHHhCcccCCCccEEEEE
Confidence 445555555555555443 334444444322211110000 0 000011122 899999999854 2457788887
Q ss_pred cccCCC-CcccCCHHHHHHHHHHHHHhCCEEEEecccc-C---c---ccCCCccccccCCCCceeehhhhcC-CCcc---
Q 011959 254 PVVGNS-GFIAPKPDFLNAIRRITKENGALLIFDEVMT-G---F---RLAYGGAQEYFGVTPDLTTLGKIIG-GGLP--- 321 (474)
Q Consensus 254 p~~~~~-G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g---~---r~g~~~~~~~~g~~pdi~t~sK~l~-~G~~--- 321 (474)
..+|.+ |...+ .+.+++|+++|++||++||.|+++. + | |.+.........+...+.++||++. +|++
T Consensus 160 ~p~N~~gG~~~s-~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~ 238 (431)
T cd00617 160 ITNNTAGGQPVS-MANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGL 238 (431)
T ss_pred CCcCCCCCccCC-HHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCC
Confidence 666654 66554 5559999999999999999999974 1 1 1110000000011112234555555 4444
Q ss_pred ---eEEEEecH-HHHHhhcCCCC-cccccCCCCChHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCee
Q 011959 322 ---VGAYGGRR-DIMEMVAPAGP-MYQAGTLSGNPLAMTAGIH-TLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI 395 (474)
Q Consensus 322 ---iG~~~~~~-~i~~~~~~~~~-~~~~~t~~~~~~~~aaa~a-al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 395 (474)
.|++++++ ++++.++.... .....++++...-+.++++ +|+...+.+..++..++.+++.+.|++. +++.
T Consensus 239 ~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~----G~~v 314 (431)
T cd00617 239 VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDEA----GVPI 314 (431)
T ss_pred CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC----CCCc
Confidence 45778876 58887763211 1112233333223333333 6654322333444444557777777665 4444
Q ss_pred EEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccC-----------------CcceEE---ecC
Q 011959 396 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ-----------------FEAGFT---SLA 454 (474)
Q Consensus 396 ~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~-----------------~~~~~~---~~~ 454 (474)
..+..|.+++++...- .+...++.-....|+..|+ +.||.+...| ...+|+ .-.
T Consensus 315 ~~P~Ggh~v~~d~~~~-----~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~ 389 (431)
T cd00617 315 VEPAGGHAVFIDAREF-----LPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRV 389 (431)
T ss_pred cCCCcceEEEEEhHHh-----cCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccc
Confidence 4455666666665321 0000011112355664444 6678754211 123455 246
Q ss_pred CcHHHHHHHHHHHHHHHhh
Q 011959 455 HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 455 ~t~e~i~~~l~~l~~~~~~ 473 (474)
.|.+++|.+.+.+.+++++
T Consensus 390 ~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 390 YTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cCHHHHHHHHHHHHHHHhh
Confidence 7999999999999988753
No 243
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.82 E-value=1.3e-17 Score=156.98 Aligned_cols=306 Identities=14% Similarity=0.095 Sum_probs=194.2
Q ss_pred CCCHHHHHHHHHHHhhCC-----CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCC
Q 011959 136 APCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG 210 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~-----~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~ 210 (474)
+....++++|+.+...-. ++++++++++++.|+++..-. ...+++..++..|.|.|.....---+|..+.++.
T Consensus 122 Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fc--LadpgdafLvPtPyY~gfdrdl~~rTgveivpv~ 199 (471)
T KOG0256|consen 122 GLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFC--LADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVH 199 (471)
T ss_pred CchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHH--hcCCCceeeecCCCCCcccccceeccCceEEEEE
Confidence 456677777777776543 578999999999999987763 2345677777777777764333333343333222
Q ss_pred CCCCCCCCCCCCCceEEccCCCHHHHHHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 011959 211 LPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287 (474)
Q Consensus 211 ~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DE 287 (474)
.....++ .+ +.++||+++.+ .+.+++.||+..++|+-|.+.++++ |..+.+++.++++-||+||
T Consensus 200 c~Ss~~f---------~i---tv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~-L~~ll~Fa~~kniHvI~DE 266 (471)
T KOG0256|consen 200 CSSSNGF---------QI---TVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEE-LISLLNFASRKNIHVISDE 266 (471)
T ss_pred eecCCCc---------cc---cHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHH-HHHHHHHHhhcceEEEeeh
Confidence 2111111 00 68888887764 2347888888777788888887777 9999999999999999999
Q ss_pred cccCc-ccCCCc--ccccc---CCCCce----eehhhhcC-CCcceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHH
Q 011959 288 VMTGF-RLAYGG--AQEYF---GVTPDL----TTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMT 355 (474)
Q Consensus 288 v~~g~-r~g~~~--~~~~~---g~~pdi----~t~sK~l~-~G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~a 355 (474)
||+|- .....| ..+.. ...+|. .++||-|| +|+|+|.+.. ++++.....+ +..+ ...++..|.
T Consensus 267 Iya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~k---mssf--~~vSs~tQ~ 341 (471)
T KOG0256|consen 267 IYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATK---MSSF--GLVSSQTQY 341 (471)
T ss_pred hhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHH---Hhhc--cCCcHHHHH
Confidence 99765 332222 11111 124553 37999999 8999999955 6667777663 2222 234556666
Q ss_pred HHHHHHHH---hcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHH
Q 011959 356 AGIHTLKR---LKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 430 (474)
Q Consensus 356 aa~aal~~---~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 430 (474)
-....|.. .+. .+...+++.+.+++.++|++ .+++.--.+.|+|+|+++..--.+ ...+.--++
T Consensus 342 ~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~----lgI~cl~s~AGlF~wvDlr~lL~s-------~tfe~El~L 410 (471)
T KOG0256|consen 342 LLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKA----LGIPCLKSNAGLFCWVDLRKLLTS-------LTFEGELEL 410 (471)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHh----cCCceeecCCeeEEEEEhHHhcCc-------CChHHHHHH
Confidence 55554432 000 22334444555555555554 466767788899999998542100 011112356
Q ss_pred HHHHHHC-CeEecccC------CcceEEecCCc-HHHHHHHHHHHHHHHh
Q 011959 431 YRGMLEE-GVYFAPSQ------FEAGFTSLAHS-SDDIQHTITAAEKVLR 472 (474)
Q Consensus 431 ~~~l~~~-Gv~v~~~~------~~~~~~~~~~t-~e~i~~~l~~l~~~~~ 472 (474)
++.++++ ++.+.|+. ++++|++++.. ++.++-++++|..++.
T Consensus 411 w~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 411 WERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 6777776 99999984 34678876554 4555559999988764
No 244
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.82 E-value=1.7e-17 Score=168.60 Aligned_cols=327 Identities=16% Similarity=0.124 Sum_probs=200.9
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-C-CCCC-------CHHHHHHHHHHHhhCCC--CCeEEEeCCHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-S-FGAP-------CLLENVLAEMVISAVPS--IEMVRFVNSGTEA 167 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~-~~~~-------~~~~~~la~~l~~~~~~--~~~v~~~~sGseA 167 (474)
..|+|..+. |..++.|++++.+.+.... . .... .+...++.+.++++++. .++|+|++|++++
T Consensus 33 ~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 106 (424)
T PLN02855 33 LVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEA 106 (424)
T ss_pred eEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHH
Confidence 357775332 4467889999988776521 1 1111 12245777888888862 4689999999999
Q ss_pred HHHHHHHh-H-hhcCCcEEEEEeCCCCCCchhHHH---hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc
Q 011959 168 CMGVLRLA-R-AFTGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (474)
Q Consensus 168 ~~~al~~a-r-~~~~~~~ii~~~~~yhg~~~~~~~---~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (474)
+..+++.. . .+..+++|++.+..|++....... ..|..+..++...... .|++++++.++.
T Consensus 107 l~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~--------------~~~~~l~~~i~~ 172 (424)
T PLN02855 107 INLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEV--------------LDVEQLKELLSE 172 (424)
T ss_pred HHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCC--------------cCHHHHHHHhcc
Confidence 99988732 1 234467788877776654332221 2233222211110000 178999998863
Q ss_pred CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCCCccccccCCCCcee--ehhhhcCCC
Q 011959 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLT--TLGKIIGGG 319 (474)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G 319 (474)
++++|++..+++++|.+.| +++|.++|++||+++|+|++|. |.. ..... ...+|++ +++|.+| .
T Consensus 173 ---~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~~g~~---~~~~~--~~~~d~~~~s~~K~~g-p 239 (424)
T PLN02855 173 ---KTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQSVPHM---PVDVQ--TLGADFLVASSHKMCG-P 239 (424)
T ss_pred ---CceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhhcCCc---CCCch--hcCCCEEEeecccccC-C
Confidence 6788888888899999999 8999999999999999999994 211 11122 2235765 6889554 2
Q ss_pred cceEEEEecHHHHHhhcCCCCc-------c-----------cccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHH
Q 011959 320 LPVGAYGGRRDIMEMVAPAGPM-------Y-----------QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITG 378 (474)
Q Consensus 320 ~~iG~~~~~~~i~~~~~~~~~~-------~-----------~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~ 378 (474)
..+|++++++++++.+.+.... + .+...+.+..+.++..++++.+.+ +...++..++.+
T Consensus 240 ~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 319 (424)
T PLN02855 240 TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGT 319 (424)
T ss_pred CccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 2489999999988776531000 0 001112345566666677877654 344555666666
Q ss_pred HHHHHHHHHhhhcCCeeE----EeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHC-CeEecccC--------
Q 011959 379 ELTQGIIDAGKKAGHAIC----GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ-------- 445 (474)
Q Consensus 379 ~l~~~L~~~~~~~~~~~~----v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~-------- 445 (474)
++++.|+++. ...+... ....+.++.+.+... ...++.+.|.++ ||.+..+.
T Consensus 320 ~l~~~L~~~~-g~~i~~~~~~~~~~r~~~v~~~~~~~--------------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~ 384 (424)
T PLN02855 320 YLYEKLSSVP-GVRIYGPKPSEGVGRAALCAFNVEGI--------------HPTDLSTFLDQQHGVAIRSGHHCAQPLHR 384 (424)
T ss_pred HHHHHHhcCC-CEEEeCCCcccccCcccEEEEEECCc--------------CHHHHHHHhcccCCEEEechhhhhHHHHH
Confidence 6666665431 1111100 012244555554211 124677888777 99987542
Q ss_pred ----CcceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 446 ----FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 446 ----~~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
...+|++ ...|++|++++++.|+++++.
T Consensus 385 ~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 385 YLGVNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred HhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 1246765 567999999999999998764
No 245
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=3.1e-17 Score=163.07 Aligned_cols=325 Identities=22% Similarity=0.245 Sum_probs=214.9
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhc---CCCCC------CCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG---TSFGA------PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEAC 168 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~~------~~~~~~~la~~l~~~~~-~-~~~v~~~~sGseA~ 168 (474)
.|+|..++ +..+..|++++.+..... .+.+. .....++..+.++++.+ . .+.|+||.+.|+|+
T Consensus 24 vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~al 97 (405)
T COG0520 24 VYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEAL 97 (405)
T ss_pred EEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHH
Confidence 57776654 236889999999987652 11121 13456677888888886 4 48899999999999
Q ss_pred HHHHHHh-HhhcCCcEEEEEeCCCCCCchhHHHhc---CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC
Q 011959 169 MGVLRLA-RAFTGRERIIKFEGCYHGHADPFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (474)
Q Consensus 169 ~~al~~a-r~~~~~~~ii~~~~~yhg~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (474)
..+.... +....+++||+.+--+|.......... |..+...+.. ..+.. +++++++++.
T Consensus 98 n~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~-~~g~~-------------~~~~~~~~i~--- 160 (405)
T COG0520 98 NLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD-DDGLL-------------DLDALEKLIT--- 160 (405)
T ss_pred HHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC-CCCCc-------------CHHHHHHhcC---
Confidence 9988832 224556889998888888776665544 3222221111 11211 6888888776
Q ss_pred CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehh--hhcCCCcce
Q 011959 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPV 322 (474)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~s--K~l~~G~~i 322 (474)
+++++|.+..+.|.+|.+.| +++|.++|+++|+++++|-+|+- + ....+.-....|.+.|| |.+.|.-.+
T Consensus 161 ~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~~---~-h~~idv~~l~~Df~afsgHKwl~gP~Gi 232 (405)
T COG0520 161 PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQAA---G-HLPIDVQELGCDFLAFSGHKWLLGPTGI 232 (405)
T ss_pred CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECcccc---C-ccCCCchhcCCCEEEEcccccccCCCce
Confidence 47899999999999999999 99999999999999999999951 1 11122223356777665 867654459
Q ss_pred EEEEecHHHHHhhcCCC---Ccc------cccCC----------CCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHH
Q 011959 323 GAYGGRRDIMEMVAPAG---PMY------QAGTL----------SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGEL 380 (474)
Q Consensus 323 G~~~~~~~i~~~~~~~~---~~~------~~~t~----------~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l 380 (474)
|.+.+++++++.+.+.. ... ...++ +.|..+..+..++++.+++ +...++.+++.+++
T Consensus 233 GvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~ 312 (405)
T COG0520 233 GVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYL 312 (405)
T ss_pred EEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999998875310 000 00111 2244555555677777765 44556666666666
Q ss_pred HHHHHHHhhhcCCeeEEe---eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcc---------
Q 011959 381 TQGIIDAGKKAGHAICGG---YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA--------- 448 (474)
Q Consensus 381 ~~~L~~~~~~~~~~~~v~---~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~--------- 448 (474)
.++|.++. ++....+ ..+.++.|.+.... ..++...|.++||.++.+..+.
T Consensus 313 ~~~L~~~~---~v~i~g~~~~~r~~~vsF~v~~~~--------------~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~ 375 (405)
T COG0520 313 LEGLSELP---GVEIYGPPDADRGGIVSFNVKGIH--------------PHDVATLLDEKGIAVRAGHHCAQPLHRLLGV 375 (405)
T ss_pred HHHHhcCC---CeEEecCCcccCceEEEEEeCCCC--------------HHHHHHHHHhCCeEEEeccccccHHHHhcCC
Confidence 66666541 1222222 24666666664321 2578899999998888764322
Q ss_pred ---eEEe--cCCcHHHHHHHHHHHHHHHh
Q 011959 449 ---GFTS--LAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 449 ---~~~~--~~~t~e~i~~~l~~l~~~~~ 472 (474)
+|++ +..|+||||++++.|+++.+
T Consensus 376 ~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 376 DATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 5664 66799999999999998753
No 246
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.81 E-value=3.5e-17 Score=165.93 Aligned_cols=318 Identities=15% Similarity=0.126 Sum_probs=183.3
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCCCC-----CCHHHHHH----HHHHHhhCCC-CCeEEEeCCHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFGA-----PCLLENVL----AEMVISAVPS-IEMVRFVNSGTE 166 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~-----~~~~~~~l----a~~l~~~~~~-~~~v~~~~sGse 166 (474)
+.+|++.++- ++ .+|+|++++.+.+... ..... ......++ .+.+++.++. ...+ +++||++
T Consensus 25 ~~~~~l~~~~--n~---~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i-~~~sgt~ 98 (416)
T PRK00011 25 EEHIELIASE--NF---VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANV-QPHSGSQ 98 (416)
T ss_pred hcCeeeeccc--Cc---CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceee-ecCCchH
Confidence 4557777662 22 5899999987765321 11110 11222233 3467777752 2334 4467999
Q ss_pred HHHHHHHHhHhhcCCcEEEEEeCCCCCCchhH--HHhcCCCCccCCCCCCCCCCCCCCCceEEcc------CCCHHHHHH
Q 011959 167 ACMGVLRLARAFTGRERIIKFEGCYHGHADPF--LVKAGSGVATLGLPDSPGVPKGATYETLTAP------FNDVSALEN 238 (474)
Q Consensus 167 A~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~--~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~------~~d~~~le~ 238 (474)
|+..+++.. ..+++.|++..++|.+..... ....+.+. ++..++ ..|++++++
T Consensus 99 al~~~l~~l--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~d~~~l~~ 159 (416)
T PRK00011 99 ANAAVYFAL--LKPGDTILGMDLAHGGHLTHGSPVNFSGKLY-----------------NVVSYGVDEETGLIDYDEVEK 159 (416)
T ss_pred HHHHHHHHh--cCCCCEEEEeccccCCcccccccccccccee-----------------eEeecCcCcccCCcCHHHHHH
Confidence 999988842 345677888877775532111 11111110 111111 128999999
Q ss_pred HHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCCCCcee--ehhh
Q 011959 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGK 314 (474)
Q Consensus 239 ~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pdi~--t~sK 314 (474)
.++++ ++++|++.. ++.|...+ +++|.++|++||+++|+||+| .|+ ..|.. . ...+ ..|++ +++|
T Consensus 160 ~i~~~--~~k~v~~~~--~~~~~~~~----~~~I~~la~~~~~~livD~a~~~g~~~~g~~-~-~~~~-~~di~~~S~~K 228 (416)
T PRK00011 160 LALEH--KPKLIIAGA--SAYSRPID----FKRFREIADEVGAYLMVDMAHIAGLVAAGVH-P-SPVP-HADVVTTTTHK 228 (416)
T ss_pred HHHhc--CCCEEEECC--CcCCCccC----HHHHHHHHHHcCCEEEEECcchhcccccCcc-C-CCCC-CCcEEEecCCc
Confidence 98743 456666642 22344556 899999999999999999998 454 32211 0 1112 34655 6899
Q ss_pred hcCCCcceEEEEec-HHHHHhhcCCCCcccccCCCC-ChHHHHHHHHH-HHHhcC--CCHHHHHHHHHHHHHHHHHHHhh
Q 011959 315 IIGGGLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSG-NPLAMTAGIHT-LKRLKE--PGTYEYLNKITGELTQGIIDAGK 389 (474)
Q Consensus 315 ~l~~G~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~-~~~~~aaa~aa-l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~ 389 (474)
++ +|++.|+++++ +++++.+...... +.++. ....+++...+ ++.+++ ++..++++++.+++++.|++.
T Consensus 229 ~l-~g~~gg~i~~~~~~~~~~l~~~~~~---~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 302 (416)
T PRK00011 229 TL-RGPRGGLILTNDEELAKKINSAVFP---GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-- 302 (416)
T ss_pred CC-CCCCceEEEeCCHHHHHHHHHHhCc---cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--
Confidence 98 46889999885 6888877632111 11222 22233333333 343332 456777888888888888764
Q ss_pred hcCCeeEE-eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----------CcceEEe------
Q 011959 390 KAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------FEAGFTS------ 452 (474)
Q Consensus 390 ~~~~~~~v-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------~~~~~~~------ 452 (474)
++.... .....++++.+.+.. .....+.+.|.++||.+.... ...+|+.
T Consensus 303 --g~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~ 368 (416)
T PRK00011 303 --GFRVVSGGTDNHLVLVDLRSKG------------LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITT 368 (416)
T ss_pred --CCeeeecCCCCeEEEEeCcccC------------CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhh
Confidence 321111 122355566553210 012467788889999987321 1235552
Q ss_pred cCCcHHHHHHHHHHHHHHHh
Q 011959 453 LAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 453 ~~~t~e~i~~~l~~l~~~~~ 472 (474)
..+|++|++++++.|++++.
T Consensus 369 ~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 369 RGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred cCcCHHHHHHHHHHHHHHHh
Confidence 25689999999999998865
No 247
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=4.9e-18 Score=153.31 Aligned_cols=328 Identities=17% Similarity=0.165 Sum_probs=204.9
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhc
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT 179 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~ 179 (474)
..+|+-|- .+--+..++++++.++......|| .++...+|.++.++.+ +.|..+|++||+.+|..+++. ...
T Consensus 22 ~~vDLRSD----TvT~PTdeMr~am~eA~vgDdVyG-eD~tt~rLE~~vA~l~-GKEAgLFv~SGTmgNllaIm~--Hc~ 93 (384)
T KOG1368|consen 22 RSVDLRSD----TVTVPTDEMRRAMAEASVGDDVYG-EDPTTNRLEQRVAELF-GKEAGLFVPSGTMGNLLAIMV--HCH 93 (384)
T ss_pred eccccccc----cccCChHHHHHHHhhcccCccccc-CCccHHHHHHHHHHHh-CccceeeecccccccHHHHHH--Hhc
Confidence 34566554 333356788898888764434454 3344466777777777 889999999999999999995 333
Q ss_pred CC-cEEEEEeCC-CCCCchhHHHh-cCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC-----CCCeEEEE
Q 011959 180 GR-ERIIKFEGC-YHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-----KGEIAAII 251 (474)
Q Consensus 180 ~~-~~ii~~~~~-yhg~~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~-----~~~~a~vi 251 (474)
.+ ..||+=+.+ -|-|-.+.++. +|..+.++. +...+ +-|++++|+.+... .+.+++|.
T Consensus 94 ~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~-~e~dg-------------tm~ledIe~~ir~~~GD~H~p~T~LIc 159 (384)
T KOG1368|consen 94 QRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVK-NENDG-------------TMDLEDIEAAIRVPKGDCHMPPTKLIC 159 (384)
T ss_pred CCCceEEeccchheeehhccChhhhccceeEeee-eCCCC-------------eeeHHHHHHhhcCCCCCccCCCceEEE
Confidence 33 444443322 22222222221 111110000 11111 11799999998742 23578999
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc--ccCCCccccccCCCCce--eehhhhcCCCcceEEE-E
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF--RLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAY-G 326 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~--r~g~~~~~~~~g~~pdi--~t~sK~l~~G~~iG~~-~ 326 (474)
+|..++++|....|-||+.++.+||++||+-|..|-+.. | -....-....+.-..|- +||||++|+ |+|-+ +
T Consensus 160 lENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasgV~vk~i~~~fDSVsiCLSKglgA--PVGSViV 236 (384)
T KOG1368|consen 160 LENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASGVPVKKICSAFDSVSICLSKGLGA--PVGSVIV 236 (384)
T ss_pred eeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcCCCHHHHHHhhhhhhhhhhccCCC--CcccEEE
Confidence 999888877666677889999999999999999996653 1 00111111222223343 489999986 78877 8
Q ss_pred ecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEe-eeceeEE
Q 011959 327 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFG 405 (474)
Q Consensus 327 ~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~~~ 405 (474)
|++++++..+..++. .++-+...-+.++|++.+|+. ....+.+-.++...+.+.++... .+...++ -..+|..
T Consensus 237 G~k~FI~kA~~~RKa-lGGGmRQsGvLaaaaLval~~--~~~~L~~dHk~A~~lAe~~~~~~---~i~v~v~a~etNiv~ 310 (384)
T KOG1368|consen 237 GSKDFIDKARHFRKA-LGGGMRQSGVLAAAALVALDE--NVPLLRADHKRAKELAEYINTPE---EIRVEVPAVETNIVN 310 (384)
T ss_pred ccHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHhcccc---ceeeecchhhcceee
Confidence 899988766522122 333445566777777777753 23355556666666666665321 1444555 4566666
Q ss_pred EEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHHHH
Q 011959 406 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 406 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~ 470 (474)
+++.... ...+.+++.+.++||++.++.....|+ ...+|+++++.++..+.+.
T Consensus 311 ~~l~q~~------------~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 311 MVLCQAR------------LTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred eeccccc------------CCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHHH
Confidence 6664432 224788999999999998875444555 5677999999999999543
No 248
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.79 E-value=1.3e-16 Score=160.07 Aligned_cols=321 Identities=16% Similarity=0.141 Sum_probs=183.3
Q ss_pred EEeccCChhhccCCCCCHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHh---hCC--CCCeEEEeCCHHHHHHH
Q 011959 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVIS---AVP--SIEMVRFVNSGTEACMG 170 (474)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~---~~~~~~~~la~~l~~---~~~--~~~~v~~~~sGseA~~~ 170 (474)
|+|..+. ...++.|++++.+.+... ...+ ++......+.+.+.+ ..+ ..++|+|++|++|++..
T Consensus 2 yld~aa~------~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNAT------TMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCC------CCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 5665544 225789999999988752 1111 111222333333332 332 35799999999999999
Q ss_pred HHHHhHh--h-cC-CcEEEEEeCCCCCCchhH--HHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC
Q 011959 171 VLRLARA--F-TG-RERIIKFEGCYHGHADPF--LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (474)
Q Consensus 171 al~~ar~--~-~~-~~~ii~~~~~yhg~~~~~--~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (474)
+++.... + .+ +++|++....|+...... +...|..+..++... .+. -|++++++.++.
T Consensus 76 ~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~-~g~-------------~d~~~l~~~i~~-- 139 (382)
T TIGR03403 76 VLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE-QGT-------------ITAEQVREAITE-- 139 (382)
T ss_pred HHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC-CCC-------------CCHHHHHHhccc--
Confidence 9985321 1 23 455666654443322221 112233222211110 010 178889888863
Q ss_pred CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehh--hhcCCCcce
Q 011959 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPV 322 (474)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~s--K~l~~G~~i 322 (474)
++++|++..++|++|.+.| +++|.++|++||+++|+|++|. + |. ...+......|++++| |.+|+ ..+
T Consensus 140 -~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~--g~-~~~~~~~~~~D~~~~s~~K~~gp-~G~ 209 (382)
T TIGR03403 140 -KTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-I--GK-IPVDVQKAGVDFLSFSAHKFHGP-KGV 209 (382)
T ss_pred -CCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-c--CC-CccCccccCCCEEEEcchhhCCC-Cce
Confidence 4678888888889999999 8899999999999999999985 1 11 0111112346777655 97652 127
Q ss_pred EEEEecHHHHHhhcCC----CCcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeE
Q 011959 323 GAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAIC 396 (474)
Q Consensus 323 G~~~~~~~i~~~~~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 396 (474)
|++..+++. .+.+. .........+.|..++.++.++++.+.+ +...+++++..++++++|.+ .+.+..
T Consensus 210 g~l~vr~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~----~~~~~~ 283 (382)
T TIGR03403 210 GGLYIRKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLE----LPDVFV 283 (382)
T ss_pred EEEEECCCC--CCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc----CCCEEE
Confidence 888776653 11110 0000011345677777777888876654 23334455555555555543 221111
Q ss_pred Eee----eceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----------------------Ccce
Q 011959 397 GGY----ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------------FEAG 449 (474)
Q Consensus 397 v~~----~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------------~~~~ 449 (474)
+.+ .+.++.+.+... ....+...|.++||.++.+. ...+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~i 349 (382)
T TIGR03403 284 VGDREHRVPNTILISIKGV--------------EGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAI 349 (382)
T ss_pred ECCCCCCcCCEEEEEeCCC--------------CHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeE
Confidence 111 123434443210 12456667888999998531 1236
Q ss_pred EEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 450 FTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 450 ~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
|++ ...|++|||++++.|++++++
T Consensus 350 R~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 350 RLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 765 566999999999999988764
No 249
>PLN02242 methionine gamma-lyase
Probab=99.79 E-value=9.3e-18 Score=168.56 Aligned_cols=243 Identities=15% Similarity=0.122 Sum_probs=159.1
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++...+|.+++++++ +.+.+++++||++|+..++.. ....++.|++.++.|.+. ...+....
T Consensus 74 ~~Pt~~~LE~~lA~l~-g~~~~l~~~sG~~Ai~~al~a--l~~~GD~Vl~~~~~Y~~~-~~~~~~~~------------- 136 (418)
T PLN02242 74 FNPTVLNLGRQMAALE-GTEAAYCTASGMSAISSVLLQ--LCSSGGHVVASNTLYGGT-HALLAHFL------------- 136 (418)
T ss_pred CChhHHHHHHHHHHHh-CCCeEEEEccHHHHHHHHHHH--HhCCCCEEEEcCCcHHHH-HHHHHHhh-------------
Confidence 5677889999999888 667888999999999999984 234567787777766443 22221100
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
.+..+.++..++..|+++++++++.+ ++++|++|.++|++|.+.+ +++|.++|++||++||+||+|+.+...
T Consensus 137 -~~~~G~~~~~~d~~d~e~l~~~i~~~--~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~~~~- 208 (418)
T PLN02242 137 -PRKCNITTTFVDITDLEAVKKAVVPG--KTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPMVLS- 208 (418)
T ss_pred -hhccCceEEEcCCCCHHHHHHhcCcC--CCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCccCCC-
Confidence 00111234445556899999988632 4789999999999999987 999999999999999999999644211
Q ss_pred CccccccCCCCceeehhhhcCC-Ccc-eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHHHH
Q 011959 297 GGAQEYFGVTPDLTTLGKIIGG-GLP-VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYL 373 (474)
Q Consensus 297 ~~~~~~~g~~pdi~t~sK~l~~-G~~-iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~ 373 (474)
...+|...-+.++||.+++ |++ .||+++++++++.+....... ...++.++..+.|++.++. +.. +..+++.
T Consensus 209 ---~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~-~~~~g~~~~~~~A~l~~~~-l~tl~~r~~~~ 283 (418)
T PLN02242 209 ---PARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA-LMLLGPTMNPKVAFELSER-LPHLSLRMKEH 283 (418)
T ss_pred ---HHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh-hhccCCCCCHHHHHHHHcC-CCcHHHHHHHH
Confidence 1122332223379999984 676 588899999888876321110 1122334445555554432 222 3455677
Q ss_pred HHHHHHHHHHHHHHhhhcCCee------------EE---eeeceeEEEEEe
Q 011959 374 NKITGELTQGIIDAGKKAGHAI------------CG---GYISGMFGFFFT 409 (474)
Q Consensus 374 ~~~~~~l~~~L~~~~~~~~~~~------------~v---~~~g~~~~i~~~ 409 (474)
.++.+++.+.|++...+.-.+. .. .+.|.|+.|++.
T Consensus 284 ~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~ 334 (418)
T PLN02242 284 CRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD 334 (418)
T ss_pred HHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC
Confidence 8888888888887631110010 11 256888899884
No 250
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.79 E-value=6.3e-17 Score=163.20 Aligned_cols=255 Identities=16% Similarity=0.122 Sum_probs=154.8
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC--CCC-CC------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG-AP------CLLENVLAEMVISAVP-SIEMVRFVNSGTEAC 168 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~-~~------~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~ 168 (474)
+.|+|..+. +..++.|++++.+.+.... ... .+ .+...++.+.++++++ +.+.++|++|+++++
T Consensus 4 ~~yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAAT------TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcC------CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 468887654 2358999999988875421 111 11 1335567778888886 467899999999999
Q ss_pred HHHHHHhHh-hc-CCcEEEEEeCCCCCCchhHHH---hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC
Q 011959 169 MGVLRLARA-FT-GRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 243 (474)
Q Consensus 169 ~~al~~ar~-~~-~~~~ii~~~~~yhg~~~~~~~---~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~ 243 (474)
+.+++.... .. +++.||+... .|........ ..|..+..++.. ..+ ..|++++++.+++
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~-~h~s~~~~~~~~~~~g~~v~~v~~~-~~~-------------~~d~~~l~~~l~~- 141 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKT-EHKAVLDTCRYLEREGFEVTYLPPK-SNG-------------LIDLEELKAAIRD- 141 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCC-ccHHHHHHHHHHHhcCCEEEEEccC-CCC-------------cCCHHHHHHhcCC-
Confidence 999875432 22 3455655544 4544332221 123222221111 001 0178999988863
Q ss_pred CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehh--hhcCCCcc
Q 011959 244 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLP 321 (474)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~s--K~l~~G~~ 321 (474)
++++|++..+++++|.+.| +++|.++|++||+++|+|++|+ + |.. ..+..+..+|++++| |.+| ...
T Consensus 142 --~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~--g~~-~~~~~~~~~D~~~~s~~K~~g-p~G 210 (402)
T TIGR02006 142 --DTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-V--GKI-PINVNELKVDLMSISGHKIYG-PKG 210 (402)
T ss_pred --CCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-c--CCc-ccCccccCCCEEEEehhhhcC-CCc
Confidence 5688888889899999998 9999999999999999999995 1 111 112223467888777 9765 233
Q ss_pred eEEEEecHHHHHhhcCCCCc----ccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH
Q 011959 322 VGAYGGRRDIMEMVAPAGPM----YQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIID 386 (474)
Q Consensus 322 iG~~~~~~~i~~~~~~~~~~----~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 386 (474)
+|+++.+++....+.+.... ......+.+...+.+..++++.+++ +...++.+++.+++++.|.+
T Consensus 211 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 281 (402)
T TIGR02006 211 IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKS 281 (402)
T ss_pred eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 99998887654433321000 0011123455556666688887654 23344455555555555543
No 251
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.79 E-value=2.3e-17 Score=163.13 Aligned_cols=278 Identities=17% Similarity=0.113 Sum_probs=168.5
Q ss_pred CCHHHHHHHHHHHhhCCC---CCeEEEeCCHHHHHHHHHHHhHhh-----------cCCcEEEEEeCCCCCCchhHHHhc
Q 011959 137 PCLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAF-----------TGRERIIKFEGCYHGHADPFLVKA 202 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~---~~~v~~~~sGseA~~~al~~ar~~-----------~~~~~ii~~~~~yhg~~~~~~~~~ 202 (474)
..+++++++++++++++. .+.++|++||++|+..+++.++.. .+.+.+|+.....|..........
T Consensus 36 ~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~ 115 (345)
T cd06450 36 ATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYL 115 (345)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHH
Confidence 357788888999888752 247999999999999999977542 122456666666776554444444
Q ss_pred CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHh
Q 011959 203 GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 279 (474)
Q Consensus 203 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~ 279 (474)
|..+..++.... + .-|+++|++.+++ .+.++++|++...++++|.+.+ +++|.++|++|
T Consensus 116 g~~~~~v~~~~~-~-------------~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~ 177 (345)
T cd06450 116 DVKVRLVPVDED-G-------------RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKY 177 (345)
T ss_pred hcCeEEeeeCCC-C-------------CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHh
Confidence 443322211100 1 1189999998874 1224566666666677898877 99999999999
Q ss_pred CCEEEEeccccCc-ccCCCccccccCC-CCcee--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHH
Q 011959 280 GALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMT 355 (474)
Q Consensus 280 g~llI~DEv~~g~-r~g~~~~~~~~g~-~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~a 355 (474)
|++||+|++|.++ ...........+. ..|.+ +++|.+++++++|+++.+ .+++.
T Consensus 178 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------~~~~~ 235 (345)
T cd06450 178 DLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------ALKLW 235 (345)
T ss_pred CCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH----------------------HHHHH
Confidence 9999999999755 2211100000111 24543 688988877778877554 22333
Q ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHH
Q 011959 356 AGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 432 (474)
Q Consensus 356 aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (474)
+ +++.+.. ++..++..++.+++.+.|.++. ++.......+.++.+.+.... + ......++.+
T Consensus 236 ~---~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~iv~f~~~~~~--~-------~~~~~~~i~~ 300 (345)
T cd06450 236 A---TLRRFGRDGYGEHIDRIVDLAKYLAELIRADP---GFELLGEPNLSLVCFRLKPSV--K-------LDELNYDLSD 300 (345)
T ss_pred H---HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCceeEEEEEECCcc--h-------hhHHHHHHHH
Confidence 3 3333332 4455666667777777666531 111111223445555543210 0 0122357888
Q ss_pred HHHHCCeEecccC----CcceEEec--CC-cHHHHHHHHHHHHH
Q 011959 433 GMLEEGVYFAPSQ----FEAGFTSL--AH-SSDDIQHTITAAEK 469 (474)
Q Consensus 433 ~l~~~Gv~v~~~~----~~~~~~~~--~~-t~e~i~~~l~~l~~ 469 (474)
.|.++|+++.+.. ...+|++. .+ |++|++++++.|++
T Consensus 301 ~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 301 RLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 8999965544321 23567753 34 99999999999876
No 252
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.78 E-value=1.5e-17 Score=165.56 Aligned_cols=237 Identities=19% Similarity=0.162 Sum_probs=161.4
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++...+|.++++++. +.+.+++++||++|+..+++.. ...++.|++....|++..........
T Consensus 38 ~~p~~~~le~~la~l~-g~~~a~~~~sG~~Ai~~~l~~l--~~~gd~Vl~~~~~y~~~~~~~~~~~~------------- 101 (369)
T cd00614 38 GNPTVDALEKKLAALE-GGEAALAFSSGMAAISTVLLAL--LKAGDHVVASDDLYGGTYRLFERLLP------------- 101 (369)
T ss_pred CChhHHHHHHHHHHHH-CCCCEEEEcCHHHHHHHHHHHH--cCCCCEEEECCCCcchHHHHHHHHHh-------------
Confidence 5667788888888887 4578889999999999999842 34567788877777774322111100
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
..+.++..++.+|++++++.++. ++++|++|+++|++|.+.+ +++|.++|++||++||+|++|.....
T Consensus 102 ---~~g~~~~~v~~~d~~~l~~~i~~---~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~~~-- 169 (369)
T cd00614 102 ---KLGIEVTFVDPDDPEALEAAIKP---ETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATPYL-- 169 (369)
T ss_pred ---hcCeEEEEeCCCCHHHHHHhcCC---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcchhc--
Confidence 01123566677789999998863 5789999999999999998 99999999999999999999952211
Q ss_pred CccccccCCCCcee--ehhhhcCC-C-cceEEEEecH-HHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~~~-~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
...+....|++ +++|.++| | .+.|++++++ ++++.++.. ........+|..+++++..|+.+ +...+
T Consensus 170 ---~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~---~~~~g~~~~p~~a~~~l~~l~tl--~~r~~ 241 (369)
T cd00614 170 ---QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFL---RLALGTILSPFDAWLLLRGLKTL--PLRME 241 (369)
T ss_pred ---CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHH---HHhhCCCCCHHHHHHHHcCCCCH--HHHHH
Confidence 11122345666 79999985 4 7899999987 888777632 11123356777777665555432 34567
Q ss_pred HHHHHHHHHHHHHHHHhh--h--cCC-ee---------EEeeeceeEEEEEe
Q 011959 372 YLNKITGELTQGIIDAGK--K--AGH-AI---------CGGYISGMFGFFFT 409 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~--~--~~~-~~---------~v~~~g~~~~i~~~ 409 (474)
+..++.+++.+.|++... + +|. .. ...+.|.++.|++.
T Consensus 242 ~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 242 RHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 777788888888775421 0 110 00 12356888888875
No 253
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.78 E-value=1.2e-16 Score=159.82 Aligned_cols=311 Identities=16% Similarity=0.122 Sum_probs=188.3
Q ss_pred CCHHHHHHHHHHHHhcC---CCC-CC-----CHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEE
Q 011959 116 ADDQVLAALGETMKKGT---SFG-AP-----CLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 184 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~---~~~-~~-----~~~~~~la~~l~~~~~--~~~~v~~~~sGseA~~~al~~ar~~~~~~~i 184 (474)
.++.+.+++.+.+++.. .++ +. .....++.+.++++++ ..++|++++|+++++..++.. ....++.|
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~--~~~~gd~v 89 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG--LLKEGDHV 89 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh--ccCCCCEE
Confidence 46789999998887631 121 22 1445678888888885 234899999999999999874 23456677
Q ss_pred EEEeCCCCCCchhHH---HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCc
Q 011959 185 IKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 261 (474)
Q Consensus 185 i~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~ 261 (474)
++....|++...... ...|..+..++... .+ ..|++++++.+++ ++++|++..+++++|.
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~~~~---~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 90 ITTPMEHNSVARPLECLKEQIGVEITIVKCDN-EG-------------LISPERIKRAIKT---NTKLIVVSHASNVTGT 152 (376)
T ss_pred EECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CC-------------CcCHHHHHHhcCC---CCeEEEEECCCCCccc
Confidence 776655544322211 11133222111110 00 1278999988853 5778888888888999
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCCCccccccCCCCcee--ehhhhcCCCcceEEEEecHHH-HHhhcC
Q 011959 262 IAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDI-MEMVAP 337 (474)
Q Consensus 262 i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~i-~~~~~~ 337 (474)
+.+ +++|.++|++||+++|+|++|+ |.. .+..+. ..+|++ ++.|.+++.-.+|+++.+++. +..+..
T Consensus 153 ~~~----~~~i~~l~~~~~~~livD~a~~~g~~---~~~~~~--~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~ 223 (376)
T TIGR01977 153 ILP----IEEIGELAQENGIFFILDAAQTAGVI---PIDMTE--LAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKS 223 (376)
T ss_pred cCC----HHHHHHHHHHcCCEEEEEhhhccCcc---CCCchh--cCCCEEEecccccccCCCCceEEEEcCCcCcCceec
Confidence 999 8899999999999999999995 221 111122 235765 466998753346777665553 111111
Q ss_pred CCCcc-------------cccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCee--EEee
Q 011959 338 AGPMY-------------QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAI--CGGY 399 (474)
Q Consensus 338 ~~~~~-------------~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~v~~ 399 (474)
..... .+...+.+...+.+..++|+.+.+ +...++.+++.+++++.|++... ..+.. +...
T Consensus 224 ~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~-~~~~~~~~~~~ 302 (376)
T TIGR01977 224 GGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINK-VKIYGPADPAN 302 (376)
T ss_pred CCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC-eEEeCCCCccc
Confidence 00000 001123456666777778887765 34566777777777777765321 00100 0011
Q ss_pred eceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHC-CeEecccC--------------CcceEEe--cCCcHHHHHH
Q 011959 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ--------------FEAGFTS--LAHSSDDIQH 462 (474)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~--------------~~~~~~~--~~~t~e~i~~ 462 (474)
.+.++.+.+... ....+.+.|.++ ||.+..+. ...+|++ ..+|++|+++
T Consensus 303 ~~~~v~~~~~~~--------------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~ 368 (376)
T TIGR01977 303 RVGVVSFTVEGI--------------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEK 368 (376)
T ss_pred cCCeEEEEECCC--------------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHH
Confidence 244555554211 125688888887 98886542 2346764 5679999999
Q ss_pred HHHHHHH
Q 011959 463 TITAAEK 469 (474)
Q Consensus 463 ~l~~l~~ 469 (474)
++++|++
T Consensus 369 ~~~~l~~ 375 (376)
T TIGR01977 369 LLEALSE 375 (376)
T ss_pred HHHHHhh
Confidence 9999975
No 254
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=4.3e-16 Score=157.06 Aligned_cols=307 Identities=15% Similarity=0.130 Sum_probs=178.1
Q ss_pred CHHHHHHHHHHH-Hh-cCCC------CCCCHHHHHHHH----HHHhhCCCCCeE-EEeCCHHHHHHHHHHHhHhhcC-Cc
Q 011959 117 DDQVLAALGETM-KK-GTSF------GAPCLLENVLAE----MVISAVPSIEMV-RFVNSGTEACMGVLRLARAFTG-RE 182 (474)
Q Consensus 117 ~p~v~~a~~~~~-~~-~~~~------~~~~~~~~~la~----~l~~~~~~~~~v-~~~~sGseA~~~al~~ar~~~~-~~ 182 (474)
||.|++|+...+ .+ +..+ ++ ++...+|.+ ++++++ +.+.+ ++++||+.|+.+++. ++.+ ++
T Consensus 41 ~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~-g~~~alv~~~SG~~A~~~~l~---al~~~GD 115 (416)
T PRK13034 41 SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLF-GCDYANVQPHSGSQANGAVYL---ALLKPGD 115 (416)
T ss_pred CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHh-CCCceEEecCCcHHHHHHHHH---HhcCCCC
Confidence 899999999985 44 2211 12 466677777 888888 55566 457999999999998 4455 45
Q ss_pred EEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC------CCHHHHHHHHhcCCCCeEEEEE-ccc
Q 011959 183 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF------NDVSALENLFENNKGEIAAIIL-EPV 255 (474)
Q Consensus 183 ~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~a~vi~-ep~ 255 (474)
.|++...++.+.... |.. +...+. ..+...+++ .|++++++.++.+ ++++|++ +++
T Consensus 116 ~Vl~~~~~~~~~~~~-----g~~------~~~~~~----~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~klVi~~~~~ 178 (416)
T PRK13034 116 TILGMSLSHGGHLTH-----GAK------VSLSGK----WYNAVQYGVDRLTGLIDYDEVEELAKEH--KPKLIIAGFSA 178 (416)
T ss_pred EEEEcCccceeeeec-----CCc------ceeccc----eeeeEEcccccccCCcCHHHHHHHHhhc--CCeEEEECCCc
Confidence 555544444331110 100 000000 000112222 4899999988653 4577777 454
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCCCCcee--ehhhhcCCCcceEEEEecHH-
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRD- 330 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~- 330 (474)
+ |...+ +.+|.++|++||++||+|++| .|. ..|... ..++ ..|++ +++|+++|+. .|+++++++
T Consensus 179 ~---g~~~d----l~~l~~la~~~g~~livD~Aha~G~~~~g~~~--~~~~-~~Di~~~s~~K~l~g~~-GG~v~~~~~~ 247 (416)
T PRK13034 179 Y---PRELD----FARFREIADEVGALLMVDMAHIAGLVAAGEHP--NPFP-HAHVVTTTTHKTLRGPR-GGMILTNDEE 247 (416)
T ss_pred c---ccccC----HHHHHHHHHHcCCEEEEeCcccccCcccCCCC--CCCC-CceEEEEeCcccCCCCC-CeEEEECcHH
Confidence 4 34445 888999999999999999999 444 333211 1111 25655 6889996532 455666554
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHH-HHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEE
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLAMTAG-IHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (474)
+.+.++. ..+.+.+-+.++...+++ .+.++.++. .++.+++.++.++|++.|.+.+. .+.. ......++.+.
T Consensus 248 ~~~~~~~--~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~--~~~~-~~~~t~i~~v~ 322 (416)
T PRK13034 248 IAKKINS--AVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGY--DLVS-GGTDNHLLLVD 322 (416)
T ss_pred HHHHHHh--hcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCC--Eecc-CCCCCcEEEEE
Confidence 4444442 111111111223333333 344444432 34578999999999999876521 1110 01234455555
Q ss_pred EecCCCcCcccccccchHHHHHHHHHHHHCCeEeccc------CC----cceEEe------cCCcHHHHHHHHHHHHHHH
Q 011959 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS------QF----EAGFTS------LAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~------~~----~~~~~~------~~~t~e~i~~~l~~l~~~~ 471 (474)
+.+.. .....+.+.|.++||++.+. .+ ..+|++ ..++++|++++++.|++++
T Consensus 323 ~~~~~------------~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~ 390 (416)
T PRK13034 323 LRPKG------------LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVL 390 (416)
T ss_pred cCCCC------------CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 53321 11244567788889999752 11 235653 3778999999999999887
Q ss_pred hh
Q 011959 472 RQ 473 (474)
Q Consensus 472 ~~ 473 (474)
.+
T Consensus 391 ~~ 392 (416)
T PRK13034 391 DD 392 (416)
T ss_pred hc
Confidence 53
No 255
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.77 E-value=6.8e-17 Score=161.50 Aligned_cols=285 Identities=17% Similarity=0.125 Sum_probs=176.2
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
+++...+|.+.++++++ .+..++++||+.|+..++.. ....++.||+..+.| +.+...+..... ..+
T Consensus 59 ~~pt~~~Le~~lA~l~G-~~~al~~~sG~~Ai~~~l~a--l~~~Gd~Vv~~~~~y-~~~~~~~~~~~~---------~~g 125 (386)
T PRK06767 59 GNPTVKLFEERMAVLEG-GEEALAFGSGMAAISATLIG--FLKAGDHIICSNGLY-GCTYGFLEVLEE---------KFM 125 (386)
T ss_pred CCcchHHHHHHHHHHhC-CCcEEEECCHHHHHHHHHHH--HhCCCCEEEEcCCcH-HHHHHHHHHHHh---------hcC
Confidence 45556888888888884 56788889999999888863 233456677666554 434333322111 001
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
+ ++..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|+++|+++|+||+|.....+.
T Consensus 126 i------~~~~~~~~d~~~l~~~i~~---~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~~~~~~ 192 (386)
T PRK06767 126 I------THSFCDMETEADIENKIRP---NTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCSPYLQR 192 (386)
T ss_pred e------EEEEeCCCCHHHHHHhhCc---CceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 1 1223344578899888863 5789999999999999998 9999999999999999999994211111
Q ss_pred CccccccCCCCcee--ehhhhcCC-Ccce-EEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G~~i-G~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
.. ..|. |++ +++|.+++ |.++ |+++++++.++.+........++ ..+|+.+++++..|+.+ +..+++
T Consensus 193 pl---~~g~--Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~--~~~~~~a~l~~~~L~tl--~~r~~~ 263 (386)
T PRK06767 193 PL---ELGC--DAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGG--IMAPFDAWLLLRGLKTL--AVRMDR 263 (386)
T ss_pred ch---hcCC--cEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCC--CCCHHHHHHHHcCCCcH--HHHHHH
Confidence 11 1233 555 68899986 7775 77888988776653110111111 23566655555554432 345566
Q ss_pred HHHHHHHHHHHHHHHhhhcCCee------------EEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeE
Q 011959 373 LNKITGELTQGIIDAGKKAGHAI------------CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 440 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~------------~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 440 (474)
.+++..++.+.|++. +.+. ..++.|.++.|++... .+...+|.+.|...++.
T Consensus 264 ~~~~a~~la~~L~~~----p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~------------~~~~~~f~~~l~~~~~~ 327 (386)
T PRK06767 264 HCDNAEKIVSFLKNH----DAVEGVWYPEGELASRQMKRGGGVISFSIKGG------------KEETQAFINDLHFITIA 327 (386)
T ss_pred HHHHHHHHHHHHHcC----CCccEEECCCcHHHHHhCCCCCceEEEEEcCC------------HHHHHHHHHhCCccEEe
Confidence 777777777777654 2111 1235678888887421 12345677777655554
Q ss_pred ecccCCc---------------------------ceEEecCCcHHHHHHHHHHHHHHHhhC
Q 011959 441 FAPSQFE---------------------------AGFTSLAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 441 v~~~~~~---------------------------~~~~~~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
+.-++.. .+|++. --|+.+.+++-|+++++.+
T Consensus 328 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~sv--GlE~~~dl~~dl~~al~~~ 386 (386)
T PRK06767 328 VSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSV--GLESWEDIVSDLEQALKKI 386 (386)
T ss_pred cCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEe--ccCCHHHHHHHHHHHHhhC
Confidence 4333211 124443 3356778888888887653
No 256
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=3e-16 Score=151.73 Aligned_cols=321 Identities=18% Similarity=0.161 Sum_probs=206.5
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCC--CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCC
Q 011959 116 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 193 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg 193 (474)
-+|+|++|+.+..-. ....-......++.+.|...++. .+-+++..||+-|+|+++.. ...++++|++...+.+|
T Consensus 16 v~~~V~~am~~~~~~-h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~s--l~~pgdkVLv~~nG~FG 92 (383)
T COG0075 16 VPPRVLLAMARPMVG-HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVAS--LVEPGDKVLVVVNGKFG 92 (383)
T ss_pred CCHHHHHHhcCCCCC-CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHh--ccCCCCeEEEEeCChHH
Confidence 368888887765422 10111245567777888888863 35677889999999999984 34467899999999888
Q ss_pred CchhHHHh-cCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHH
Q 011959 194 HADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 272 (474)
Q Consensus 194 ~~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l 272 (474)
....-+.. .|..+..+..++...+ |++++++.|++++ ++.+|.+-.+-.++|.+.| +++|
T Consensus 93 ~R~~~ia~~~g~~v~~~~~~wg~~v--------------~p~~v~~~L~~~~-~~~~V~~vH~ETSTGvlnp----l~~I 153 (383)
T COG0075 93 ERFAEIAERYGAEVVVLEVEWGEAV--------------DPEEVEEALDKDP-DIKAVAVVHNETSTGVLNP----LKEI 153 (383)
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCC--------------CHHHHHHHHhcCC-CccEEEEEeccCcccccCc----HHHH
Confidence 76655543 3443333222221111 8999999999653 5777777777778999999 9999
Q ss_pred HHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCCc--c--------
Q 011959 273 RRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM--Y-------- 342 (474)
Q Consensus 273 ~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~--~-------- 342 (474)
.++|++||+++|+|-|-+ | .|..+-.+.||++.-+..-.|++++---+|.+..+++..+.+...... +
T Consensus 154 ~~~~k~~g~l~iVDaVsS-~-Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~ 231 (383)
T COG0075 154 AKAAKEHGALLIVDAVSS-L-GGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLK 231 (383)
T ss_pred HHHHHHcCCEEEEEeccc-C-CCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHH
Confidence 999999999999998875 1 233455666777554556789999433488888999988887643211 1
Q ss_pred -----cccCCCCChHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCc
Q 011959 343 -----QAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY 414 (474)
Q Consensus 343 -----~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~ 414 (474)
....|+.+.....+..++|+.+.++ +.+++.+++.+.+++++++++.+.-. +..... .
T Consensus 232 ~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~--~~~~~s------------~ 297 (383)
T COG0075 232 YMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA--DPERRS------------P 297 (383)
T ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc--CcccCC------------C
Confidence 1223344444555666889888774 45666667777777777766322110 000001 1
Q ss_pred CcccccccchHHHHHHHHHHHH-CCeEecccCC----cceEEe--cCCcHHHHHHHHHHHHHHHhhC
Q 011959 415 NFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF----EAGFTS--LAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~----~~~~~~--~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
.......|.......+...+++ .|+.+.++.. ..+||. -..+.+++..++.+|+.++.++
T Consensus 298 tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 298 TVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred ceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 1111222322222233335554 4898887743 246773 4679999999999999998763
No 257
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.77 E-value=2.4e-16 Score=149.67 Aligned_cols=287 Identities=15% Similarity=0.157 Sum_probs=179.8
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC----C
Q 011959 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN----D 232 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~----d 232 (474)
.++++++-+.+++.++++ .....+.|++-+.+|-+. ...+...|. .++.++.+ +
T Consensus 126 diiit~G~t~~l~~~l~~--~~N~gd~vlie~~ty~~A-L~s~~a~gv-------------------~~ipv~md~~Gi~ 183 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRT--LINRGDHVLIEEYTYPSA-LQSMEALGV-------------------KIIPVKMDQDGID 183 (472)
T ss_pred eEEEecCCchHHHHHHHH--hhcCCCceEEecccchHH-HHhccccCc-------------------eEEeccccCCCCC
Confidence 799999999999999995 233344555545566442 222222222 23333332 7
Q ss_pred HHHHHHHHhcCC------CCeEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc---C------
Q 011959 233 VSALENLFENNK------GEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL---A------ 295 (474)
Q Consensus 233 ~~~le~~l~~~~------~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~---g------ 295 (474)
+|.|++.+.... .+...+.+-| .+|++|...+.+. .++|.+||+||++++|.||+|-=+ .. +
T Consensus 184 pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~er-rk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~ 262 (472)
T KOG0634|consen 184 PESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLER-RKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELES 262 (472)
T ss_pred HHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHH-HHHHHHHHHHcCEEEEecCccceeeccccCCCccccC
Confidence 999999987532 2355666666 5577888877665 999999999999999999999422 22 1
Q ss_pred CCccccc---------cCC--CCcee---ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHH
Q 011959 296 YGGAQEY---------FGV--TPDLT---TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 361 (474)
Q Consensus 296 ~~~~~~~---------~g~--~pdi~---t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal 361 (474)
..+..+. .+. .-.++ +|||-++.|+|+||+.+++-+++.+-. .....|.+.+.+.+....+.|
T Consensus 263 p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~---~ae~~t~~pSg~sq~iv~a~l 339 (472)
T KOG0634|consen 263 PAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILD---LAEVATSGPSGFSQGIVYAML 339 (472)
T ss_pred ccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhh---hcceeecCcccccHHHHHHHH
Confidence 0111001 111 11233 799999999999999999988777652 334456667778888888888
Q ss_pred HHhcCCCHHHHHHHHHH-------HHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHH
Q 011959 362 KRLKEPGTYEYLNKITG-------ELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 434 (474)
Q Consensus 362 ~~~~~~~~~~~~~~~~~-------~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 434 (474)
+..-++++++.+.+... .+...|.+.+...-+....+..|+|+|+++.- .++. ....-....+.+...+
T Consensus 340 ~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~---~~~~-~~~~i~q~~e~i~~~~ 415 (472)
T KOG0634|consen 340 KRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPY---INFD-TKKSINQIEEIIFIKA 415 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecc---cccc-cccchHHHHHHHHHHH
Confidence 87665544444444433 33333333322222445567789999999851 1110 0001112334566777
Q ss_pred HHCCeEecccCC----------c-ceEEecC-CcHHHHHHHHHHHHHHHhh
Q 011959 435 LEEGVYFAPSQF----------E-AGFTSLA-HSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 435 ~~~Gv~v~~~~~----------~-~~~~~~~-~t~e~i~~~l~~l~~~~~~ 473 (474)
.++||.+.++.. . .+|++.. ...|++++++++|..++++
T Consensus 416 vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 416 VKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred HHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHH
Confidence 899999887631 1 3455543 4788999999999998875
No 258
>PRK14012 cysteine desulfurase; Provisional
Probab=99.76 E-value=4.3e-16 Score=157.31 Aligned_cols=254 Identities=19% Similarity=0.186 Sum_probs=150.1
Q ss_pred CEEEeccCChhhccCCCCCHHHHHHHHHHHH--hc--CCCC-CC------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMK--KG--TSFG-AP------CLLENVLAEMVISAVP-SIEMVRFVNSGTE 166 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~--~~--~~~~-~~------~~~~~~la~~l~~~~~-~~~~v~~~~sGse 166 (474)
+.|+|..+. +..++.+++++.+.+. .. .... .. .+...++.+.++++++ +.+.++|++||++
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 357775543 3468999999988875 21 1110 00 1334567788888886 4577999999999
Q ss_pred HHHHHHHHhHh--hcCCcEEEEEeCCCCCCchhHHHh--cCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc
Q 011959 167 ACMGVLRLARA--FTGRERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (474)
Q Consensus 167 A~~~al~~ar~--~~~~~~ii~~~~~yhg~~~~~~~~--~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (474)
|+..+++.... ...++.||+.+..|+......... .|..+..++.. ..+. -|+++|++.+++
T Consensus 78 al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~-~~g~-------------~d~~~l~~~i~~ 143 (404)
T PRK14012 78 SDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ-SNGI-------------IDLEKLEAAMRD 143 (404)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC-CCCc-------------CCHHHHHHhcCC
Confidence 99999875432 234566666655554433222211 23322211111 0110 179999998863
Q ss_pred CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehh--hhcCCCc
Q 011959 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGL 320 (474)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~s--K~l~~G~ 320 (474)
++++|++..+++++|.+.+ +++|.++|++||+++|+|++|+. |.. ..+.....+|++++| |.+|++
T Consensus 144 ---~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~~---g~~-~~~~~~~~~D~~~~s~~K~~gp~- 211 (404)
T PRK14012 144 ---DTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQSV---GKV-PIDLSKLKVDLMSFSAHKIYGPK- 211 (404)
T ss_pred ---CCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchhc---CCc-ccCcccCCCCEEEEehhhccCCC-
Confidence 5678888888889999998 99999999999999999999951 111 011112347877655 977643
Q ss_pred ceEEEEecHHHHHhhcCC--C----CcccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH
Q 011959 321 PVGAYGGRRDIMEMVAPA--G----PMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIID 386 (474)
Q Consensus 321 ~iG~~~~~~~i~~~~~~~--~----~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 386 (474)
.+|+++.+++....+.+. + ..+..+| .+.....+..++++.++. +...++.+++.+++.+.|++
T Consensus 212 g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt--~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~ 283 (404)
T PRK14012 212 GIGALYVRRKPRVRLEAQMHGGGHERGMRSGT--LPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD 283 (404)
T ss_pred ceEEEEEecCCCCCCCceecCCCccCCccCCC--cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 689998877643333210 0 0011111 233334444456655433 33445555555556555544
No 259
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.76 E-value=4.5e-16 Score=154.72 Aligned_cols=310 Identities=14% Similarity=0.076 Sum_probs=190.6
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCch
Q 011959 117 DDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD 196 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~ 196 (474)
.++..+++.+.+..+..++ ..+...++++++++++ +.+++++++||++|+..+++.. ...++++||+...+|.+...
T Consensus 10 ~~~e~~a~~~~~~~~~~~~-~g~~~~~~e~~la~~~-g~~~~v~~~sgt~aL~~~l~al-~~~pGd~Viv~~~t~~~~~~ 86 (376)
T TIGR02379 10 TGQELEYIAEAISEGKLSG-DGPFSRRCETWLENRT-GTKKALLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTAN 86 (376)
T ss_pred CHHHHHHHHHHHHcCCccC-CcHHHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHHHc-CCCCcCEEEECCCCcHHHHH
Confidence 3566888888887754332 3456788888888887 6789999999999999988742 24466888888888876433
Q ss_pred hHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHH
Q 011959 197 PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (474)
Q Consensus 197 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (474)
. +...|..+...+... .++ . -|++++++.++. ++++|+ |+ +.+|...+ +++|.++|
T Consensus 87 ~-~~~~G~~~v~vd~d~-~~~---------~---~d~~~le~~i~~---~tk~Ii--p~-~~~G~~~d----~~~I~~la 142 (376)
T TIGR02379 87 A-FVLRGAKIVFVDIRP-DTM---------N---IDETLIESAITH---RTKAIV--PV-HYAGVACD----MDTIMALA 142 (376)
T ss_pred H-HHHcCCEEEEEecCC-CcC---------C---CCHHHHHHhcCc---CceEEE--Ee-CCCCCccC----HHHHHHHH
Confidence 3 333344332221111 000 0 178889988863 566766 33 34577777 89999999
Q ss_pred HHhCCEEEEeccccCcccCCCccccccCCCCceeehh----hhcCCCcceEEEEec-HHHHHhhcCC---CCc-------
Q 011959 277 KENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVAPA---GPM------- 341 (474)
Q Consensus 277 ~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~s----K~l~~G~~iG~~~~~-~~i~~~~~~~---~~~------- 341 (474)
++||++||.|++|+-.. .+.....|..-|+.+|| |.++.|.+.|+++.+ +++.+.++.. +..
T Consensus 143 ~~~~i~vIeDaa~~~g~---~~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 219 (376)
T TIGR02379 143 NKHQLFVIEDAAQGVMS---TYKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRG 219 (376)
T ss_pred HHCCCEEEEECccccCC---ccCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCcccccc
Confidence 99999999999996221 01111233344778888 999988789998665 7777766521 100
Q ss_pred --------ccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hcC-CeeEEeeeceeEEEEE
Q 011959 342 --------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAG-HAICGGYISGMFGFFF 408 (474)
Q Consensus 342 --------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~-~~~~v~~~g~~~~i~~ 408 (474)
..+..+..+.+.++.+++.|+.++ +..++-+++.++..+.|..+.. ..+ .+......-.++.+.+
T Consensus 220 ~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~--~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (376)
T TIGR02379 220 EVDKYTWRDIGSSYLPSELQAAYLWAQLEQAD--RINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKL 297 (376)
T ss_pred CCCcceeeeecccCCccHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEE
Confidence 012233445666677767777653 4555666666667777765321 111 0101111112333433
Q ss_pred ecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----------C---------------cceEEe--cCCcHHHH
Q 011959 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------F---------------EAGFTS--LAHSSDDI 460 (474)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------~---------------~~~~~~--~~~t~e~i 460 (474)
... ...+++.+.|.++||...... . ..++++ ...|++|+
T Consensus 298 ~~~-------------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~ 364 (376)
T TIGR02379 298 KDE-------------DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQ 364 (376)
T ss_pred CCc-------------CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHH
Confidence 211 113678899999999765211 0 012343 45699999
Q ss_pred HHHHHHHHHHH
Q 011959 461 QHTITAAEKVL 471 (474)
Q Consensus 461 ~~~l~~l~~~~ 471 (474)
+++++.+++++
T Consensus 365 ~~i~~~i~~~~ 375 (376)
T TIGR02379 365 ARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 260
>PLN02651 cysteine desulfurase
Probab=99.75 E-value=3.3e-16 Score=155.91 Aligned_cols=245 Identities=16% Similarity=0.101 Sum_probs=153.0
Q ss_pred CCCHHHHHHHHHHHHhc--CCCC--C-----CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHh-h-cCCc
Q 011959 115 HADDQVLAALGETMKKG--TSFG--A-----PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-F-TGRE 182 (474)
Q Consensus 115 ~~~p~v~~a~~~~~~~~--~~~~--~-----~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~-~-~~~~ 182 (474)
..++.|.+++.+.+... .... . ..+...++.+.++++++ ..+.++|++|+++++..+++.+.. + .+++
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~ 89 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKK 89 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCC
Confidence 46789999999887542 1111 1 12345677888888886 467899999999999999876532 2 3356
Q ss_pred EEEEEeCCCCCCchhHHH--hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCC
Q 011959 183 RIIKFEGCYHGHADPFLV--KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 260 (474)
Q Consensus 183 ~ii~~~~~yhg~~~~~~~--~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (474)
+||+.+..|+........ ..|..+..++... .+. -|++++++.++. ++++|++..+++++|
T Consensus 90 ~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~-------------~d~~~l~~~i~~---~t~lv~v~~~~n~tG 152 (364)
T PLN02651 90 HVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS-DGL-------------VDLDELAAAIRP---DTALVSVMAVNNEIG 152 (364)
T ss_pred EEEEcccccHHHHHHHHHHHhcCCEEEEEccCC-CCc-------------CCHHHHHHhcCC---CcEEEEEECCCCCce
Confidence 666655444443222221 1222221111110 010 178999998863 578888888888999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC-CccccccCCCCceee--hhhhcCCCcceEEEEecHHHHHhhcC
Q 011959 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRRDIMEMVAP 337 (474)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~-~~~~~~~g~~pdi~t--~sK~l~~G~~iG~~~~~~~i~~~~~~ 337 (474)
.+.| +++|.++|++||+++++|.+|+. |. .+..+. ...|+++ .-|. +|...+|+++.+++..+.+.+
T Consensus 153 ~~~~----l~~I~~~~~~~g~~~~vD~a~~~---g~~~~~~~~--~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p 222 (364)
T PLN02651 153 VIQP----VEEIGELCREKKVLFHTDAAQAV---GKIPVDVDD--LGVDLMSISGHKI-YGPKGVGALYVRRRPRVRLEP 222 (364)
T ss_pred eccc----HHHHHHHHHHcCCEEEEEcchhh---CCcccCccc--CCCCEEEechhhh-CCCCceEEEEEcCCCCCCCCc
Confidence 9999 99999999999999999999951 11 122222 3457775 4584 443459999888876665543
Q ss_pred CCCc----ccccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH
Q 011959 338 AGPM----YQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIID 386 (474)
Q Consensus 338 ~~~~----~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 386 (474)
.... ......+.|..++.+..++|+.+.+ +...++.+++.+++++.|.+
T Consensus 223 ~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~ 277 (364)
T PLN02651 223 LMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRA 277 (364)
T ss_pred cccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 1100 0011224566677777788888764 34445555566666666554
No 261
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.74 E-value=6.2e-16 Score=153.34 Aligned_cols=300 Identities=16% Similarity=0.099 Sum_probs=180.8
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHH
Q 011959 121 LAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV 200 (474)
Q Consensus 121 ~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~ 200 (474)
.+++.+.+.++.. +......++.+.+++++ +.+.+++++||++|++.+++..+ ...+++|++...+||+.... +.
T Consensus 2 ~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~-~~~~~~~~~sgt~al~~~l~~l~-~~~gd~vl~~~~~~~~~~~~-~~ 76 (352)
T cd00616 2 LEAVEEVLDSGWL--TLGPKVREFEKAFAEYL-GVKYAVAVSSGTAALHLALRALG-IGPGDEVIVPSFTFVATANA-IL 76 (352)
T ss_pred hHHHHHHHHcCCc--cCCHHHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHHHHH-HH
Confidence 3566676666432 23556778888888888 45789999999999999998532 24567888888888875433 33
Q ss_pred hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhC
Q 011959 201 KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG 280 (474)
Q Consensus 201 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g 280 (474)
..|..+...+..... ...|++++++.++ +++++|++.+ ..|...+ +++|+++|++||
T Consensus 77 ~~g~~~~~~~~~~~~-------------~~~d~~~l~~~i~---~~~~~v~~~~---~~G~~~~----~~~i~~l~~~~~ 133 (352)
T cd00616 77 LLGATPVFVDIDPDT-------------YNIDPELIEAAIT---PRTKAIIPVH---LYGNPAD----MDAIMAIAKRHG 133 (352)
T ss_pred HcCCeEEEEecCCCc-------------CCcCHHHHHHhcC---cCCeEEEEEC---CCCCcCC----HHHHHHHHHHcC
Confidence 333322221111000 0117899998875 3567777654 3576766 899999999999
Q ss_pred CEEEEecccc-Cc-ccCCCccccccCCCCceeehh----hhcCCCcceEEEEec-HHHHHhhcC---CCCc---------
Q 011959 281 ALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVAP---AGPM--------- 341 (474)
Q Consensus 281 ~llI~DEv~~-g~-r~g~~~~~~~~g~~pdi~t~s----K~l~~G~~iG~~~~~-~~i~~~~~~---~~~~--------- 341 (474)
++||+|++|+ |. ..+ ...+...|+.++| |.+++| +.|+++.+ +++.+.+.. ....
T Consensus 134 i~li~D~a~~~g~~~~~-----~~~~~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (352)
T cd00616 134 LPVIEDAAQALGATYKG-----RKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHE 207 (352)
T ss_pred CeEEEECCCCCCCeECC-----EEcccCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCCccccc
Confidence 9999999995 32 111 1223334555544 999543 46777665 577665542 1100
Q ss_pred ccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEe---eeceeEEEEEecCCCcCccc
Q 011959 342 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFFFTEGPVYNFED 418 (474)
Q Consensus 342 ~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~---~~g~~~~i~~~~~~~~~~~~ 418 (474)
....++..+++.++.++..++.+ +...++.+++.+++++.|.++. ...+..... ....++.+.+....
T Consensus 208 ~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~------ 278 (352)
T cd00616 208 ILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLP-GIRLPDVPPGVKHSYHLYVIRLDPEA------ 278 (352)
T ss_pred eeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCceeeEEEEEEECCcC------
Confidence 01123445677777776666544 4566777788888888887631 111111111 12234444442100
Q ss_pred ccccchHHHHHHHHHHHHCCeEecccCC---------------------------cceEEe--cCCcHHHHHHHHHHHH
Q 011959 419 AKKSETTKFARFYRGMLEEGVYFAPSQF---------------------------EAGFTS--LAHSSDDIQHTITAAE 468 (474)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------------~~~~~~--~~~t~e~i~~~l~~l~ 468 (474)
......+.+.|.++||.+..... ..++++ ...|++|++.++++|+
T Consensus 279 -----~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 279 -----GESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred -----CCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 11235788899999996642211 134554 4569999999998874
No 262
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.6e-15 Score=137.30 Aligned_cols=307 Identities=14% Similarity=0.163 Sum_probs=187.6
Q ss_pred CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHhH--hhcCC-cEEEE-EeCCCCCCchhHHHhcCCCCccC
Q 011959 137 PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLAR--AFTGR-ERIIK-FEGCYHGHADPFLVKAGSGVATL 209 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al~~ar--~~~~~-~~ii~-~~~~yhg~~~~~~~~~g~~~~~~ 209 (474)
...+...|++.+.+.++ ..+.+.+||+...+...+.-+-- ...|. ++|+. ..+-|-|+.+..+.-.----++
T Consensus 76 ~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~k- 154 (417)
T COG3977 76 KAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAK- 154 (417)
T ss_pred hhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeecc-
Confidence 35677889999999887 36789999987777777766321 11222 23333 3667877665443211000000
Q ss_pred CCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 210 GLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 210 ~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
|..+..+ .+.-.+++ |.++|+- .+.+.+|++.-+.|++|.+...+| +.+|-+|+++||+.||.|.+|
T Consensus 155 --P~iel~~--~g~FKY~v---DF~~l~i-----~e~~g~ic~SRPtNPTGNVlTdeE-~~kldalA~~~giPliIDnAY 221 (417)
T COG3977 155 --PNIELLP--AGQFKYHV---DFEHLHI-----GESTGAICVSRPTNPTGNVLTDEE-LAKLDALARQHGIPLIIDNAY 221 (417)
T ss_pred --CCccccc--ccceeecc---CHHHccc-----ccccceEEecCCCCCCCCcccHHH-HHHHHHHhhhcCCcEEEeccc
Confidence 1111111 00001222 6666642 247889999888888998887777 999999999999999999999
Q ss_pred cCc-ccCCCccccccCCCCcee---ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHH--
Q 011959 290 TGF-RLAYGGAQEYFGVTPDLT---TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-- 363 (474)
Q Consensus 290 ~g~-r~g~~~~~~~~g~~pdi~---t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~-- 363 (474)
|. .++--|.-...-..++++ ++||.=-.|.|+|-+++++++++.+...... -+......+.+.+...++.
T Consensus 222 -g~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~i---isLap~~~G~Aia~~mie~gd 297 (417)
T COG3977 222 -GVPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGI---ISLAPGRMGPAIAAEMIESGD 297 (417)
T ss_pred -CCCCCceecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccce---eeecCCCccHHHHHHHhhcch
Confidence 34 333222211112245554 5778533799999999999999998742211 1222233344444444431
Q ss_pred ---hcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeE
Q 011959 364 ---LKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 440 (474)
Q Consensus 364 ---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 440 (474)
+.++-.+--++++.+...+.|+......++..+-+....|+|+.|.+-+++. .+++++|..+||+
T Consensus 298 l~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt------------~~LYq~LKa~Gvl 365 (417)
T COG3977 298 LLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITT------------EELYQRLKARGVL 365 (417)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCCH------------HHHHHHHHhCeEE
Confidence 1111222223334444445555555555555444444456677776654433 6899999999999
Q ss_pred ecccCC-------------cceEEecCCcHHHHHHHHHHHHHHHhh
Q 011959 441 FAPSQF-------------EAGFTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 441 v~~~~~-------------~~~~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+.|+.+ ..+|++++-+++.|+..+.+|.+.+++
T Consensus 366 ~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 366 MVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVER 411 (417)
T ss_pred EecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 999842 135889999999999999999988764
No 263
>PRK07049 methionine gamma-lyase; Validated
Probab=99.73 E-value=1.2e-15 Score=153.81 Aligned_cols=214 Identities=19% Similarity=0.205 Sum_probs=144.9
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHH---HhcCCCCccCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPD 213 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~ 213 (474)
+++....|.+.|+++. +.+.+++++||++|+..++.. ....++.|++.++.|.+...... ...|.
T Consensus 81 ~~Pt~~~Le~~lA~le-g~~~~iv~~sG~~Ai~~~l~a--l~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi--------- 148 (427)
T PRK07049 81 NHPNSEIVEDRLAVYE-GAESAALFSSGMSAIATTLLA--FVRPGDVILHSQPLYGGTETLLAKTFRNFGV--------- 148 (427)
T ss_pred CCcCHHHHHHHHHHHh-CCCcEEEEccHHHHHHHHHHH--HhCCCCEEEEcCCCcccHHHHHHHHHHhcCc---------
Confidence 4555578888888887 566899999999999988874 33456788888888988543321 11122
Q ss_pred CCCCCCCCCCceEEcc-CCCHHHHHHHHhcC--CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHH------hCCEEE
Q 011959 214 SPGVPKGATYETLTAP-FNDVSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE------NGALLI 284 (474)
Q Consensus 214 ~~g~~~~~~~~~~~~~-~~d~~~le~~l~~~--~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~------~g~llI 284 (474)
+++.++ ..|++++++.+.+. .+++++|++|.++|++|.+.+ +++|.+++++ +++++|
T Consensus 149 ----------~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~~la~~~~~~~~~~~~vv 214 (427)
T PRK07049 149 ----------GAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVRRVADAIEARQGHRPIIA 214 (427)
T ss_pred ----------EEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHHHHHHHhhhcccCCCEEE
Confidence 112222 23678888777531 236889999999999999988 6666666665 899999
Q ss_pred EeccccCc-ccCCCccccccCCCCcee--ehhhhcC--CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHH
Q 011959 285 FDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIG--GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIH 359 (474)
Q Consensus 285 ~DEv~~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~--~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~a 359 (474)
+||++.++ ... . .+ ++ .|++ ++||.++ +|+|+||+++++++++.+.. .......+.+|+.+.+++.
T Consensus 215 vDety~~~~~~~-p--l~-~g--~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~---~~~~~g~~ls~~~a~l~~r 285 (427)
T PRK07049 215 CDNTLLGPVFQK-P--LE-HG--ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRA---LRSAIGTQLDPHSCWMLGR 285 (427)
T ss_pred EECCccccccCC-c--cc-cC--CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHH---HHHhcCCCCCHHHHHHHHc
Confidence 99998654 211 1 11 23 3555 7999999 48999999999998888763 2122233567888777776
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 011959 360 TLKRLKEPGTYEYLNKITGELTQGIIDA 387 (474)
Q Consensus 360 al~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (474)
.|+.+ ...+++..++.+.+.+.|++.
T Consensus 286 ~L~tl--~~R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 286 SLETL--VLRMERANRNARAVAEFLRDH 311 (427)
T ss_pred CCChH--HHHHHHHHHHHHHHHHHHHhC
Confidence 66543 233455566777777777654
No 264
>PRK06460 hypothetical protein; Provisional
Probab=99.73 E-value=8e-16 Score=153.05 Aligned_cols=234 Identities=14% Similarity=0.137 Sum_probs=147.2
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhH---HHhcCCCCccCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPD 213 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~~ 213 (474)
.++...+|.+.++++.+. +..+.++||++|+..++.. ....+++||+..+.|.+..... +...|.
T Consensus 43 ~~p~~~~L~~~lA~l~g~-~~~v~~~sG~~ai~~~l~a--l~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~--------- 110 (376)
T PRK06460 43 ANPTVLELTKKIVELENA-EMGVAFSSGMGAISTTALA--LLKPGNSVLVHRDMFGRSYRFFTDYLKNWGV--------- 110 (376)
T ss_pred CCccHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHH--HhCCCCEEEEecCCcCcHHHHHHHHHHhhCc---------
Confidence 345567777888877743 4455668899999988873 2334567777665554432211 111121
Q ss_pred CCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcc
Q 011959 214 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFR 293 (474)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r 293 (474)
++..++.++.+.++++++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+||+|..+.
T Consensus 111 ----------~v~~~~~~~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~~ 173 (376)
T PRK06460 111 ----------NVDASNPGSDNIIEKAKS---KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTPI 173 (376)
T ss_pred ----------EEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCccc
Confidence 244455555555655543 36789999999999999999 8889999999999999999995321
Q ss_pred cCCCccccccCCCCcee--ehhhhcCC--CcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCH
Q 011959 294 LAYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (474)
Q Consensus 294 ~g~~~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (474)
.... . .++ .|++ ++||.++| +.++|++++++++++.+... ......+.+|..+..++..++.+ +..
T Consensus 174 ~~~~--l-~~~--~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~---~~~~g~~~~~~~a~~~l~~~~~l--~~r 243 (376)
T PRK06460 174 NQKP--L-ELG--ADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQM---RRTLGTSLDPHAAYLTLRGIKTL--KIR 243 (376)
T ss_pred cCCh--h-hcC--CCEEEeecceeccCCCCceEEEEecCHHHHHHHHHH---HHhcCCCCCHHHHHHHHhchhhH--HHH
Confidence 1110 1 123 4555 79999974 36799999999998887631 11112334555444444444433 345
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hcC-Ce---------eEEeeeceeEEEEEe
Q 011959 370 YEYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (474)
.+++.++.+++.+.|++... .+| +. ....+.|.|+.|++.
T Consensus 244 ~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~ 297 (376)
T PRK06460 244 MDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVN 297 (376)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 67778888888888775410 011 00 012367889999985
No 265
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.73 E-value=4.1e-16 Score=155.53 Aligned_cols=238 Identities=16% Similarity=0.146 Sum_probs=153.3
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
+.++...+|.+.+++.. +.+.+++++||++|+..+++.. ...+++||+..+ .|+.+...+...-. ..
T Consensus 51 ~~~p~~~~le~~la~l~-g~~~~~~~~sG~~Ai~~al~al--~~~Gd~Vl~~~~-~~~~t~~~~~~~~~---------~~ 117 (380)
T TIGR01325 51 YANPTVAAFEERIAALE-GAERAVATATGMSAIQAALMTL--LQAGDHVVASRS-LFGSTVGFISEILP---------RF 117 (380)
T ss_pred CCCchHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHH--hCCCCEEEEecC-CcchHHHHHHHHHH---------Hh
Confidence 34566788888888877 4578899999999999999742 334567776544 45544332211000 01
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccC
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (474)
+ .++..++.+|++++++.++. ++++|++|.++|+.|.+.+ +++|.++|+++|++||+||+|..+...
T Consensus 118 g------~~v~~v~~~d~~~l~~~i~~---~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~~~~ 184 (380)
T TIGR01325 118 G------IEVSFVDPTDLNAWEAAVKP---NTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATPVLQ 184 (380)
T ss_pred C------CEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 1 13555666789999888763 5789999998888999988 999999999999999999999633111
Q ss_pred CCccccccCCCCcee--ehhhhcCC-Ccce-EEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~i-G~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
......+|++ +++|.++| |.++ |++++++++++.++. .........+|..+..++..++.+. ...+
T Consensus 185 -----~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~---~~~~~g~~~~p~~a~~~l~~l~tl~--~r~~ 254 (380)
T TIGR01325 185 -----QPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAV---YLRHTGPAMSPFNAWVLLKGLETLS--LRMQ 254 (380)
T ss_pred -----CchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHH---HHHhhCCCCCHHHHHHHHhccCcHH--HHHH
Confidence 1122345776 58999996 6666 666888888777763 1111112345565555555554432 3456
Q ss_pred HHHHHHHHHHHHHHHHh--hh--cCC-e---------eEEeeeceeEEEEEe
Q 011959 372 YLNKITGELTQGIIDAG--KK--AGH-A---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~--~~--~~~-~---------~~v~~~g~~~~i~~~ 409 (474)
+..++...+.+.|++.. .+ +|. . ....+.|.|+.|++.
T Consensus 255 ~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 255 KQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 66677777777776531 00 111 0 012356889999885
No 266
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.73 E-value=5.8e-16 Score=155.33 Aligned_cols=216 Identities=15% Similarity=0.121 Sum_probs=146.1
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
+++...+|.+.++++++ .+.+++++||+.|+..++.. ....++.||+..+.|.. +.......-
T Consensus 62 ~~p~~~~Le~~iA~~~g-~~~~l~~~sG~~Ai~~al~~--ll~~Gd~Vl~~~~~y~~-~~~~~~~~~------------- 124 (400)
T PRK06234 62 GNPTSTEVENKLALLEG-GEAAVVAASGMGAISSSLWS--ALKAGDHVVASDTLYGC-TFALLNHGL------------- 124 (400)
T ss_pred CCccHHHHHHHHHHHhC-CCcEEEEcCHHHHHHHHHHH--HhCCCCEEEEecCccch-HHHHHHHHH-------------
Confidence 45667788888888884 46789999999999988873 23456677776655543 333221100
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHh--CCEEEEeccccCccc
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGFRL 294 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~r~ 294 (474)
...+.++..++.+|++++++.++. ++++|++|.++|++|.+.+ +++|.++|++| |++||+||+|.....
T Consensus 125 --~~~G~~v~~vd~~d~e~l~~~i~~---~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~~~~~ 195 (400)
T PRK06234 125 --TRYGVEVTFVDTSNLEEVRNALKA---NTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNTFCTPYI 195 (400)
T ss_pred --hhCCeEEEEECCCCHHHHHHHhcc---CCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCCchhc
Confidence 001123555666789999998863 5789999999899999988 99999999997 999999999953311
Q ss_pred CCCccccccCCCCcee--ehhhhcCC-Ccce-EEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHH
Q 011959 295 AYGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (474)
Q Consensus 295 g~~~~~~~~g~~pdi~--t~sK~l~~-G~~i-G~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (474)
+.. .+...|++ +++|.+++ |+++ ||+++++++++.++..... ...+...+|..++.++..|+.+ +...
T Consensus 196 ~~~-----l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~-~~~g~~l~p~~a~l~~~~l~tl--~~r~ 267 (400)
T PRK06234 196 QRP-----LQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIK-DMTGSVIGPFEAFLIIRGMKTL--QIRM 267 (400)
T ss_pred CCc-----hhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHH-HhcCCCCCHHHHHHHHhccCcH--HHHH
Confidence 111 12234655 68999985 7765 8889999988877531111 1123466777777766666433 3455
Q ss_pred HHHHHHHHHHHHHHHH
Q 011959 371 EYLNKITGELTQGIID 386 (474)
Q Consensus 371 ~~~~~~~~~l~~~L~~ 386 (474)
++..++..++.+.|++
T Consensus 268 ~~~~~na~~~a~~L~~ 283 (400)
T PRK06234 268 EKHCKNAMKVAKFLES 283 (400)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 6666777777777664
No 267
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.72 E-value=3.4e-15 Score=148.98 Aligned_cols=308 Identities=11% Similarity=0.025 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchh
Q 011959 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (474)
Q Consensus 118 p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (474)
++-.+++.+.+..+..++ ..+...++++++++++ +.+++++++||++|+..+++.+ ....+++||+...+|.+.. .
T Consensus 11 ~~~~~~~~~~l~~~~~~g-~~~~~~~~e~~la~~~-g~~~~v~~~sgt~al~~~l~~~-~~~~Gd~Viv~~~t~~~~~-~ 86 (375)
T PRK11706 11 GTELDYIQQAMSSGKLCG-DGGFTRRCQQWLEQRF-GSAKVLLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTA-N 86 (375)
T ss_pred HHHHHHHHHHHHcCCccC-CCHHHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHh-CCCCCCEEEECCCCcHHHH-H
Confidence 445777888777664332 3566788888888887 6689999999999999988742 2345678888887777643 3
Q ss_pred HHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHH
Q 011959 198 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 277 (474)
Q Consensus 198 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~ 277 (474)
.+...|..+...+... .++ ..|++++++.++. ++++|++. +.+|...+ +++|.++|+
T Consensus 87 ~~~~~G~~~v~~d~d~-~~~------------~~d~~~le~~i~~---~tk~i~~~---~~~G~~~~----~~~i~~la~ 143 (375)
T PRK11706 87 AFVLRGAKIVFVDIRP-DTM------------NIDETLIEAAITP---KTRAIVPV---HYAGVACE----MDTIMALAK 143 (375)
T ss_pred HHHHcCCEEEEEecCC-CcC------------CcCHHHHHHhcCC---CCeEEEEe---CCCCCccC----HHHHHHHHH
Confidence 3334444322211110 000 1178999998864 45666643 24676666 899999999
Q ss_pred HhCCEEEEeccccCc-ccCCCccccccCCCCceeehh----hhcCCCcceEEEEecHHHHHhhcCC---C--C--c----
Q 011959 278 ENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGRRDIMEMVAPA---G--P--M---- 341 (474)
Q Consensus 278 ~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~s----K~l~~G~~iG~~~~~~~i~~~~~~~---~--~--~---- 341 (474)
+||++||.|++|+-. ..+. ...|-.-|+.+|| |.++.|.+.+++..++++.+.++.. + . .
T Consensus 144 ~~~i~vIeD~a~a~g~~~~~----~~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 219 (375)
T PRK11706 144 KHNLFVVEDAAQGVMSTYKG----RALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQ 219 (375)
T ss_pred HcCCEEEEECccccccccCC----eeeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccC
Confidence 999999999999622 2111 1112223777777 9998777777777778887654321 0 0 0
Q ss_pred -------ccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hcC-CeeEEeeeceeEEEEEe
Q 011959 342 -------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAG-HAICGGYISGMFGFFFT 409 (474)
Q Consensus 342 -------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~-~~~~v~~~g~~~~i~~~ 409 (474)
..+..+-.+.+.++.+++.|+.+ +...++.+++.+++.+.|..+.. ..+ ..........++++.+.
T Consensus 220 ~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (375)
T PRK11706 220 VDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR 297 (375)
T ss_pred CCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC
Confidence 01122333456666666666654 34555555666666666654310 001 00001112223444432
Q ss_pred cCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------------------C--------cceEEe--cCCcHHHHH
Q 011959 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------------F--------EAGFTS--LAHSSDDIQ 461 (474)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------------------~--------~~~~~~--~~~t~e~i~ 461 (474)
. .....++.+.|.++||.+.... . ..+.++ ...|++|++
T Consensus 298 ~-------------~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~ 364 (375)
T PRK11706 298 D-------------LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQR 364 (375)
T ss_pred C-------------cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHH
Confidence 1 1123678899999999754210 0 012333 346899999
Q ss_pred HHHHHHHHHH
Q 011959 462 HTITAAEKVL 471 (474)
Q Consensus 462 ~~l~~l~~~~ 471 (474)
.+++.|++++
T Consensus 365 ~i~~~i~~~~ 374 (375)
T PRK11706 365 TVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 268
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.72 E-value=1e-15 Score=151.75 Aligned_cols=245 Identities=16% Similarity=0.071 Sum_probs=150.4
Q ss_pred CCCCHHHHHHHHHHHHhc--CCCCC-C------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhh--cCC
Q 011959 114 GHADDQVLAALGETMKKG--TSFGA-P------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--TGR 181 (474)
Q Consensus 114 G~~~p~v~~a~~~~~~~~--~~~~~-~------~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~--~~~ 181 (474)
+..++.|++++.+.+... ..... . .+...++.++++++++ +.+.++|++|++++++.+++..... ..+
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g 87 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKG 87 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCC
Confidence 446899999999988542 11110 1 1335678888888886 4678999999999999998854321 122
Q ss_pred cEEEEEeCCCCCCchhHHH---hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCC
Q 011959 182 ERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (474)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~---~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (474)
++.|+.....|........ ..|..+..++... .+ ..|++++++.+++ ++++|+++.++++
T Consensus 88 ~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~-------------~~d~~~l~~~l~~---~~~lv~~~~~~n~ 150 (353)
T TIGR03235 88 KKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE-SG-------------RIDVDELADAIRP---DTLLVSIMHVNNE 150 (353)
T ss_pred CCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC-CC-------------cCCHHHHHHhCCC---CCEEEEEEcccCC
Confidence 2444444444544332221 1232222111110 00 1278999988863 5788888999999
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCCCccccccCCCCceeehh--hhcCCCcceEEEEecHHHHHhh
Q 011959 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMV 335 (474)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pdi~t~s--K~l~~G~~iG~~~~~~~i~~~~ 335 (474)
+|.+.| +++|.++|++||+++|+|++|. |.. ....+. ...|++++| |.++. ..+|+++.+++..+..
T Consensus 151 tG~~~~----~~~I~~l~~~~~~~~ivD~a~~~g~~---~~~~~~--~~~D~~~~s~~K~~gp-~g~g~l~~~~~~~~~~ 220 (353)
T TIGR03235 151 TGSIQP----IREIAEVLEAHEAFFHVDAAQVVGKI---TVDLSA--DRIDLISCSGHKIYGP-KGIGALVIRKRGKPKA 220 (353)
T ss_pred ceeccC----HHHHHHHHHHcCCEEEEEchhhcCCc---cccccc--cCCCEEEeehhhcCCC-CceEEEEEccCccccc
Confidence 999998 9999999999999999999995 211 111122 246777554 97652 2389998888753321
Q ss_pred cCCCCccc-------ccCCCCChHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH
Q 011959 336 APAGPMYQ-------AGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIID 386 (474)
Q Consensus 336 ~~~~~~~~-------~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 386 (474)
. ..+... ....+.|.....+..++++.+.+ ++..++++++.+++++.|++
T Consensus 221 ~-~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 279 (353)
T TIGR03235 221 P-LKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT 279 (353)
T ss_pred c-cCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc
Confidence 1 011111 11223456666777778877653 45566677777777776654
No 269
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.72 E-value=1.8e-15 Score=151.08 Aligned_cols=305 Identities=18% Similarity=0.182 Sum_probs=197.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCC---C--C----CCHHHHHHHHHHHhhCC-CC-CeEEEeCCHHHHHHHHHHHhHh-hcCC
Q 011959 114 GHADDQVLAALGETMKKGTSF---G--A----PCLLENVLAEMVISAVP-SI-EMVRFVNSGTEACMGVLRLARA-FTGR 181 (474)
Q Consensus 114 G~~~p~v~~a~~~~~~~~~~~---~--~----~~~~~~~la~~l~~~~~-~~-~~v~~~~sGseA~~~al~~ar~-~~~~ 181 (474)
|..++.|++++.+.+...... + . ..+...+..+.+++.++ .. +.|+|++|++++++.++...+. ..++
T Consensus 9 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g 88 (371)
T PF00266_consen 9 GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPG 88 (371)
T ss_dssp -B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTT
T ss_pred cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccc
Confidence 456899999999988752111 1 1 12345677777888876 34 6899999999999999996432 4677
Q ss_pred cEEEEEeCCCCCCchhHHHh---cCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCC
Q 011959 182 ERIIKFEGCYHGHADPFLVK---AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (474)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~~---~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (474)
++|++....|++........ .|..+..++.+.. + .-|++++++.+. +++++|++..+.+.
T Consensus 89 ~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~-~-------------~~~~~~~~~~l~---~~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 89 DEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG-G-------------SLDLEDLEEALN---PDTRLVSISHVENS 151 (371)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT-S-------------SCSHHHHHHHHH---TTESEEEEESBETT
T ss_pred cccccccccccccccccccccccchhhhcccccccc-c-------------hhhhhhhhhhhc---cccceEEeeccccc
Confidence 88999888888765333222 2332221111100 1 117999999997 47899999999999
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC-CccccccCCCCceee--hhhhcCCCcceEEEEecHHHHHhh
Q 011959 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRRDIMEMV 335 (474)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~-~~~~~~~g~~pdi~t--~sK~l~~G~~iG~~~~~~~i~~~~ 335 (474)
+|.+.| +++|.++|++||+++++|-+|+ + |. ....+ ...+|+++ .-| |+|+..+|+++.+++.++.+
T Consensus 152 tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~--g~~~id~~--~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~ 221 (371)
T PF00266_consen 152 TGVRNP----IEEIAKLAHEYGALLVVDAAQS-A--GCVPIDLD--ELGADFLVFSSHK-LGGPPGLGFLYVRPEAIERL 221 (371)
T ss_dssp TTBBSS----HHHHHHHHHHTTSEEEEE-TTT-T--TTSS--TT--TTTESEEEEESTS-TTSSSTEEEEEEEHHHHHHH
T ss_pred ccEEee----eceehhhhhccCCceeEechhc-c--cccccccc--ccccceeeecccc-cCCCCchhhheehhhhhhcc
Confidence 999999 9999999999999999999995 1 11 12222 23467764 569 88766699999999999888
Q ss_pred cCCCCccc------------------ccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCe
Q 011959 336 APAGPMYQ------------------AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHA 394 (474)
Q Consensus 336 ~~~~~~~~------------------~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (474)
.+...... +..-+.|.....+...+++.+++ +...++..++.+++++.|.++ +..
T Consensus 222 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~----~~~ 297 (371)
T PF00266_consen 222 RPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEEL----PGI 297 (371)
T ss_dssp HTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TTE
T ss_pred ccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcC----Cce
Confidence 54211000 00003456666777788887744 445566666666666666664 321
Q ss_pred e-----EEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC------------cceEEe--cCC
Q 011959 395 I-----CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------------EAGFTS--LAH 455 (474)
Q Consensus 395 ~-----~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------------~~~~~~--~~~ 455 (474)
. +....+.++.+.+... ....+.+.|.++||.+..+.. +.+|++ ...
T Consensus 298 ~~~~~~~~~~~~~i~~~~~~~~--------------~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~n 363 (371)
T PF00266_consen 298 EVLGPDDEPRRPSIVSFNLPGS--------------DADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYN 363 (371)
T ss_dssp EESSSSCGGBGTTEEEEEETTS--------------SHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTS
T ss_pred eEeeecccccccceEEEeecCC--------------CHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCC
Confidence 1 1123455556655321 125778888888999887421 456775 566
Q ss_pred cHHHHHHH
Q 011959 456 SSDDIQHT 463 (474)
Q Consensus 456 t~e~i~~~ 463 (474)
|++|||++
T Consensus 364 t~~dv~~l 371 (371)
T PF00266_consen 364 TEEDVDRL 371 (371)
T ss_dssp SHHHHHHH
T ss_pred CHHHHhhC
Confidence 99999875
No 270
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.72 E-value=1.6e-15 Score=150.91 Aligned_cols=233 Identities=15% Similarity=0.134 Sum_probs=156.2
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
++++...+|.+.++++.+ .+.+++++||++|+..++.. ...+++.|++..++|.+.........+..
T Consensus 48 ~~~p~~~~le~~lA~l~g-~~~v~~~~gg~~Ai~~~l~a--ll~~GD~Vl~~~p~y~~~~~~~~~~~~~~---------- 114 (382)
T TIGR02080 48 SGNPTRDLLQQALAELEG-GAGAVVTNTGMSAIHLVTTA--LLGPDDLLVAPHDCYGGTYRLLNALAKKG---------- 114 (382)
T ss_pred CCCchHHHHHHHHHHHhC-CCcEEEEcCHHHHHHHHHHH--HcCCCCEEEEcCCCcHHHHHHHHHHHhhc----------
Confidence 456667888888888874 57899999999999999984 24456788888888876443222221111
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~ 294 (474)
++ .+..++..|++++++.++. ++++|+++.++|++|.+.+ +++|.++|+++|++||+||+|..+ ..
T Consensus 115 ~~------~v~~~d~~d~~~l~~ai~~---~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~~ 181 (382)
T TIGR02080 115 CF------RVLFVDQGDEQALRAALAQ---KPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSPALQ 181 (382)
T ss_pred Ce------EEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 00 1222233478999988863 5788899988889999988 899999999999999999999533 21
Q ss_pred CCCccccccCCCCcee--ehhhhcCC--CcceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCH
Q 011959 295 AYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (474)
Q Consensus 295 g~~~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (474)
. . . ..| .|++ +++|.++| +++.|++++ ++++.+.+.. .......+.+|+.+..++..++.+. ..
T Consensus 182 ~-p--l-~~g--aDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~---~~~~~g~~~sp~~a~l~lr~l~tl~--~R 250 (382)
T TIGR02080 182 N-P--L-ALG--ADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAW---WANNLGVTGGAFDSYLTLRGLRTLV--AR 250 (382)
T ss_pred C-c--h-hhC--CCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHH---HHHccCCCCCHHHHHHHHcccchHH--HH
Confidence 1 1 1 123 3555 79999974 578999866 6777776652 2222244678888777766665442 23
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCee------------------EEeeeceeEEEEEe
Q 011959 370 YEYLNKITGELTQGIIDAGKKAGHAI------------------CGGYISGMFGFFFT 409 (474)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~~------------------~v~~~g~~~~i~~~ 409 (474)
.++..++...+.+.|++ ++.+. ...+.|.|+.|++.
T Consensus 251 ~~~~~~na~~~a~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 304 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQT----QPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK 304 (382)
T ss_pred HHHHHHHHHHHHHHHHh----CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec
Confidence 45556666666666654 22211 12367889999885
No 271
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.72 E-value=6.9e-16 Score=154.59 Aligned_cols=234 Identities=15% Similarity=0.103 Sum_probs=154.4
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
++++...+|.+.++++. +.+.+++++||+.|+..++.. ....+++||+....|.+ +.......-
T Consensus 67 ~~~p~~~~le~~lA~l~-g~~~al~~~sG~~Ai~~~l~a--ll~~Gd~Vl~~~~~~~~-t~~~~~~~~------------ 130 (403)
T PRK07810 67 YGNPTVSMFEERLRLIE-GAEACFATASGMSAVFTALGA--LLGAGDRLVAARSLFGS-CFVVCNEIL------------ 130 (403)
T ss_pred CCCchHHHHHHHHHHHh-CCCcEEEECChHHHHHHHHHH--HhCCCCEEEEccCCcch-HHHHHHHHH------------
Confidence 35555778888898888 466899999999999998874 23456677766544433 332221100
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cccc
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRL 294 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~ 294 (474)
...+.++..++.+|++++++.++. ++++|++|.+.|++|.+.+ +++|.++|+++|++||+||+|. ++..
T Consensus 131 ---~~~G~~v~~vd~~d~~~l~~ai~~---~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~~~~~ 200 (403)
T PRK07810 131 ---PRWGVETVFVDGEDLSQWEEALSV---PTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFATPLLQ 200 (403)
T ss_pred ---HHcCcEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 001123555666789999998873 5789999999999999988 9999999999999999999994 3211
Q ss_pred CCCccccccCCCCcee--ehhhhcCC-Ccce-EEEEecHHHHH-hhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCH
Q 011959 295 AYGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIME-MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (474)
Q Consensus 295 g~~~~~~~~g~~pdi~--t~sK~l~~-G~~i-G~~~~~~~i~~-~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (474)
. . . ..| .|++ +++|.+++ |.++ |+++++++.+. .++. .........+|..++.++..|+.+ +..
T Consensus 201 ~-~--~-~~g--aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~---~~~~~g~~~s~~~a~l~l~~L~tl--~~R 269 (403)
T PRK07810 201 R-G--L-PLG--ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK---LMRHTGPALSAFNAWVLLKGLETL--ALR 269 (403)
T ss_pred C-h--h-hcC--CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccCcH--HHH
Confidence 1 1 1 123 4655 68899985 7777 66777877554 2331 111122356788888777777644 345
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCeeEE------------------eeeceeEEEEEec
Q 011959 370 YEYLNKITGELTQGIIDAGKKAGHAICG------------------GYISGMFGFFFTE 410 (474)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~~~v------------------~~~g~~~~i~~~~ 410 (474)
.++..++..++.+.|++. +.+..| .+.|.++.|++..
T Consensus 270 ~~~~~~~a~~~a~~L~~~----p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 270 VRHSNASALRIAEFLEGH----PAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred HHHHHHHHHHHHHHHhcC----CCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 556666666666666542 322222 2678899998853
No 272
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=1.7e-15 Score=151.46 Aligned_cols=238 Identities=16% Similarity=0.158 Sum_probs=157.4
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
+.++...+|.++++++. +.+.+++++||++|+..++.. ....++.||+..+.|++.......... ..
T Consensus 61 ~~~p~~~~le~~lA~l~-g~~~~i~~ssG~~Ai~~~l~a--ll~~GD~Vi~~~~~y~~~~~~~~~~~~----------~~ 127 (398)
T PRK08249 61 NTNPTVQAFEEKVRILE-GAEAATAFSTGMAAISNTLYT--FLKPGDRVVSIKDTYGGTNKIFTEFLP----------RM 127 (398)
T ss_pred CCChHHHHHHHHHHHHh-CCCeEEEeCChHHHHHHHHHH--hcCCCCEEEEcCCchHHHHHHHHHHHh----------hC
Confidence 35666788888888887 456788899999999999874 234567888888888763221111000 00
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccC
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (474)
| .++..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|++||++||+|++|..+...
T Consensus 128 G------i~v~~vd~~d~e~l~~~i~~---~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~~~~ 194 (398)
T PRK08249 128 G------VDVTLCETGDHEQIEAEIAK---GCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFATPINQ 194 (398)
T ss_pred C------eEEEEcCCCCHHHHHHhcCC---CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCccccC
Confidence 1 12334445589999998863 5789999988889999998 999999999999999999999633111
Q ss_pred CCccccccCCCCcee--ehhhhcCC-Ccce-EEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~i-G~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
.. .....|++ +++|.++| |.++ |++++++++++.+... ........++..+..++..|+.+. ...+
T Consensus 195 ~~-----l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~---~~~~g~~~s~~~a~l~l~~l~tL~--~R~~ 264 (398)
T PRK08249 195 NP-----LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHY---REINGATMDPMSAYLILRGMKTLK--LRVR 264 (398)
T ss_pred Cc-----hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHH---HHhcCCCCCHHHHHHHHhCcchHH--HHHH
Confidence 11 12234554 68999985 5565 6667888888877531 122334567777777777766553 3445
Q ss_pred HHHHHHHHHHHHHHHHhh----hcC-Ce---------eEEeeeceeEEEEEe
Q 011959 372 YLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (474)
+..++...+.+.|++... .|| +. ....+.|.++.|++.
T Consensus 265 ~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~ 316 (398)
T PRK08249 265 QQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLK 316 (398)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEc
Confidence 666777777777664210 011 00 012356888888885
No 273
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=3.7e-15 Score=148.00 Aligned_cols=232 Identities=19% Similarity=0.155 Sum_probs=153.0
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
++++...+|.+.++++. +.+..++++||++|+..++. .+..+++||+.++.|++.........
T Consensus 49 ~~~pt~~~le~~la~l~-g~~~~~~~~sG~~ai~~~~~---ll~~Gd~Vl~~~~~y~~t~~~~~~~~------------- 111 (366)
T PRK08247 49 TGNPTRGVLEQAIADLE-GGDQGFACSSGMAAIQLVMS---LFRSGDELIVSSDLYGGTYRLFEEHW------------- 111 (366)
T ss_pred CCCchHHHHHHHHHHHh-CCCcEEEEcCHHHHHHHHHH---HhCCCCEEEEecCCcCcHHHHHHHHh-------------
Confidence 35666788888888888 44567889999999988764 34566889999999987432221110
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCccc
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRL 294 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~r~ 294 (474)
...+.++..++..|++++++.++. ++++|++|.++|+.|.+.+ +++|.++|++||+++|+||+| +++..
T Consensus 112 ---~~~G~~v~~vd~~d~~~l~~~i~~---~tklv~le~P~NP~~~~~d----l~~I~~la~~~g~~lIvD~t~~~~~~~ 181 (366)
T PRK08247 112 ---KKWNVRFVYVNTASLKAIEQAITP---NTKAIFIETPTNPLMQETD----IAAIAKIAKKHGLLLIVDNTFYTPVLQ 181 (366)
T ss_pred ---hccCceEEEECCCCHHHHHHhccc---CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcccccc
Confidence 001123555566689999998863 5788888887777766555 999999999999999999999 43311
Q ss_pred CCCccccccCCCCcee--ehhhhcCC--CcceEEEEec-HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCH
Q 011959 295 AYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (474)
Q Consensus 295 g~~~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (474)
.. .+ .+ .|++ ++||.++| ++..|+++++ +++.+.+.. .........+|+.+..++..|+.+ +..
T Consensus 182 -~p--~~-~g--~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~---~~~~~g~~~s~~~a~l~~~~l~tl--~~r 250 (366)
T PRK08247 182 -RP--LE-EG--ADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAY---YQNAAGAVLSPFDSWLLIRGMKTL--ALR 250 (366)
T ss_pred -Cc--hh-cC--CcEEEeecceeccCCCceeeeEEecChHHHHHHHHH---HHHhcCCCCChHHHHHHHhccCcH--HHH
Confidence 11 11 22 3544 79999985 4788999886 667766652 122223456777777666666433 234
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCee--EEeeeceeEEEEEe
Q 011959 370 YEYLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFT 409 (474)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~~--~v~~~g~~~~i~~~ 409 (474)
.++.+++.+.+.+.|++ ++.+. ..++.|.|+.|++.
T Consensus 251 ~~~~~~~a~~l~~~L~~----~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 251 MRQHEENAKAIAAFLNE----QPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred HHHHHHHHHHHHHHHHh----CCCeeEEecCCcCcEEEEEEC
Confidence 44556666666666654 34332 24457888888874
No 274
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=3.2e-15 Score=148.92 Aligned_cols=233 Identities=15% Similarity=0.132 Sum_probs=155.9
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
++++...+|.++|+++.+ .+.+++++||++|+..++.. ....++.|++.++.|++............
T Consensus 49 ~~~pt~~~L~~~lA~l~g-~~~~i~~~sg~~Ai~~~l~~--l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~---------- 115 (386)
T PRK08045 49 RGNPTRDVVQRALAELEG-GAGAVLTNTGMSAIHLVTTV--FLKPGDLLVAPHDCYGGSYRLFDSLAKRG---------- 115 (386)
T ss_pred CCCccHHHHHHHHHHHhC-CCeEEEECCHHHHHHHHHHH--HcCCCCEEEEcCCCcHHHHHHHHHHHhhC----------
Confidence 456667788888888875 46799999999999999984 23456788888888876443322221110
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~ 294 (474)
++ .+..++..|++++++.++. ++++|+++.++|++|.+.+ +++|.++|+++|+++|+||+|... ..
T Consensus 116 gi------~v~~vd~~d~e~l~~~l~~---~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~~~~ 182 (386)
T PRK08045 116 CY------RVLFVDQGDEQALRAALAE---KPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSPALQ 182 (386)
T ss_pred Ce------EEEEeCCCCHHHHHHhccc---CCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 00 1122223478999888863 5788999988899999998 899999999999999999999533 21
Q ss_pred CCCccccccCCCCcee--ehhhhcCC--CcceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCH
Q 011959 295 AYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (474)
Q Consensus 295 g~~~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (474)
.. .....|++ +++|.++| +...|++++ ++++.+.+.. .......+.+|+.+..++..|+.+ +..
T Consensus 183 -~p-----l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~---~~~~~g~~~~p~~~~l~~rgl~tl--~~R 251 (386)
T PRK08045 183 -NP-----LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW---WANNIGVTGGAFDSYLLLRGLRTL--VPR 251 (386)
T ss_pred -Cc-----hhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHH---HHHhcCCCCCHHHHHHHHhhhccH--HHH
Confidence 11 12233655 68999984 477888866 5777666642 112224457888887777777543 334
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCeeE------------------EeeeceeEEEEEe
Q 011959 370 YEYLNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFT 409 (474)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~~~------------------v~~~g~~~~i~~~ 409 (474)
.++..++...+.+.|++. +.+.. ..+.|.|+.|++.
T Consensus 252 ~~~~~~na~~la~~L~~~----p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~ 305 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQ----PLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_pred HHHHHHHHHHHHHHHHcC----CCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec
Confidence 455666666666666542 22111 2366888888885
No 275
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.71 E-value=5.7e-16 Score=137.48 Aligned_cols=281 Identities=17% Similarity=0.191 Sum_probs=182.0
Q ss_pred HHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCC
Q 011959 142 NVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKG 220 (474)
Q Consensus 142 ~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~ 220 (474)
.++...+.+--| ..|.+.+..|..|.++..+|.. ..+|+++|+.+.++|.-+...+ ...+.
T Consensus 72 k~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~-c~PGkeKIl~cPPtysMY~v~A-~iNd~---------------- 133 (375)
T KOG0633|consen 72 KRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCV-CDPGKEKILDCPPTYSMYVVDA-AINDA---------------- 133 (375)
T ss_pred chhhhhcccCCCCCccceEEecCcHHHHHHHHhhe-ecCCccceeecCCcceeEEEEe-ecCCc----------------
Confidence 455555555555 5789999999999999999843 4467899999999985543221 11222
Q ss_pred CCCceEEccCC-----CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc
Q 011959 221 ATYETLTAPFN-----DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294 (474)
Q Consensus 221 ~~~~~~~~~~~-----d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~ 294 (474)
.++.+|.+ +.+++.+.++.. ..++++++.++.|++|.+...++ +.+|.+.-+ +.++++||+|..| ..
T Consensus 134 ---eVvkvpl~pdF~lnvdai~evl~~d-s~iK~~F~tSPgNPtg~~ik~~d-i~KiLe~p~--nglVVvDEAYidFsg~ 206 (375)
T KOG0633|consen 134 ---EVVKVPLNPDFSLNVDAIAEVLELD-SKIKCIFLTSPGNPTGSIIKEDD-ILKILEMPD--NGLVVVDEAYIDFSGV 206 (375)
T ss_pred ---eEEEecCCCCccccHHHHHHHHhcc-ccceEEEEcCCCCCCcccccHHH-HHHHHhCCC--CcEEEEeeeeEeeccc
Confidence 23333332 688888888753 36889999888888999988555 555555444 7899999999888 43
Q ss_pred CCCccccccCCCCcee---ehhhhcC-CCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHH--hcC-C
Q 011959 295 AYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR--LKE-P 367 (474)
Q Consensus 295 g~~~~~~~~g~~pdi~---t~sK~l~-~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~--~~~-~ 367 (474)
+. ...+..-.|+++ ||||++| +|+|+|+...+.++.+.+...+ ..|+.+..+..+|+++|.- ++. +
T Consensus 207 ~S--~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K-----aPYNiS~~~s~~AL~Als~~n~kkme 279 (375)
T KOG0633|consen 207 ES--RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK-----APYNISVAGSVAALAALSDSNGKKME 279 (375)
T ss_pred cc--cchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc-----CCccccchhHHHHHHhcCcccchHHH
Confidence 32 222233357766 7999999 8999999999999988887422 2566667777788877751 111 3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhhcCCeeEE--eeeceeEEEEEecCCCcCcccccccchHHHHHHH-HHHHHCCeEeccc
Q 011959 368 GTYEYLNKITGELTQGIIDAGKKAGHAICG--GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY-RGMLEEGVYFAPS 444 (474)
Q Consensus 368 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v--~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~ 444 (474)
+.++.+.+.+.+|...|.++ +...+. ....+|+.+++.+. +......+. +.+-+.||+++-.
T Consensus 280 ~~rdaiv~er~RL~keLt~v----~~~~~~~gg~daNFiLi~v~~~-----------~n~~akkly~q~at~~gVvVRfr 344 (375)
T KOG0633|consen 280 DVRDAIVRERERLFKELTEV----PFLNDYPGGSDANFILIEVTGG-----------DNGMAKKLYKQDATKMGVVVRFR 344 (375)
T ss_pred HHHHHHHHHHHHHHHHhhcC----ccccCCCCcccccEEEEEEcCC-----------CcHHHHHHHHHHHHhcceEEEEc
Confidence 34444444445555555443 322221 22456777776543 222334444 4445779998765
Q ss_pred CC-----cceEEecCCcHHHHHHHHHHHHHH
Q 011959 445 QF-----EAGFTSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 445 ~~-----~~~~~~~~~t~e~i~~~l~~l~~~ 470 (474)
+. +.+|++ ..|+|+.+.+++.|+++
T Consensus 345 gse~~c~G~lRit-vGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 345 GSEEGCKGYLRIT-VGTPEENTVLMKCLKQF 374 (375)
T ss_pred CCccccceeEEEE-cCCcccchHHHHHHHhh
Confidence 42 245554 55778888888888765
No 276
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.71 E-value=2.6e-15 Score=150.39 Aligned_cols=238 Identities=14% Similarity=0.102 Sum_probs=154.2
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
++++...+|.++++++. +.+..++++||+.|+..++.. ....+++||+.++.|.+.......... ..
T Consensus 62 ~~~p~~~~Le~~lA~l~-G~~~~~~~~sG~~Ai~~~l~~--~l~~Gd~Vl~~~~~y~~~~~~~~~~~~----------~~ 128 (398)
T PRK07504 62 YSNPTVDMFEKRMCALE-GAEDARATASGMAAVTAAILC--QVKAGDHVVAARALFGSCRYVVETLLP----------RY 128 (398)
T ss_pred CCCchHHHHHHHHHHHh-CCCeeeEecCHHHHHHHHHHH--HhCCCCEEEEcCCchhHHHHHHHHHHh----------hc
Confidence 34566788888888888 556667788999999887763 344567888888777664322211100 00
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccC
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (474)
| .++..++..|++++++.++ +++++|++|.++|++|.+.+ +++|.++|+++|+++|+||+|......
T Consensus 129 G------~~v~~vd~~d~e~l~~ai~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~~~~ 195 (398)
T PRK07504 129 G------IESTLVDGLDLDNWEKAVR---PNTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATPLFQ 195 (398)
T ss_pred C------eEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCccccccC
Confidence 1 1234444458999998886 36789999999999999998 999999999999999999999522111
Q ss_pred CCccccccCCCCcee--ehhhhcCC-CcceEE-EEecHHHHHh-hcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHH
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGA-YGGRRDIMEM-VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~-~~~~~~i~~~-~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (474)
.. ..+| .|++ +++|.+++ |+++|+ ++++++.++. ++. .........+|..++.++..|+.+ +...
T Consensus 196 ~~---~~~g--aDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~---~~~~~g~~~s~~~A~~~l~~L~tl--~~R~ 265 (398)
T PRK07504 196 KP---LELG--AHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD---YFRHTGPSLSPFNAWTLLKGLETL--PVRV 265 (398)
T ss_pred Cc---hhhC--CCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccchH--HHHH
Confidence 11 1123 4655 68999985 889865 5677766542 321 111112356777877777777655 3455
Q ss_pred HHHHHHHHHHHHHHHHHh--h--hcC-Ce---------eEEeeeceeEEEEEe
Q 011959 371 EYLNKITGELTQGIIDAG--K--KAG-HA---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~--~--~~~-~~---------~~v~~~g~~~~i~~~ 409 (474)
++..++...+.+.|++.. . .|| +. ...++.|.|+.|++.
T Consensus 266 ~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 266 RQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 566677777777776531 0 011 00 012356889999985
No 277
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.71 E-value=3.2e-15 Score=148.37 Aligned_cols=212 Identities=11% Similarity=0.081 Sum_probs=139.5
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
++...+|.+.++++. +.+.+++++||++|+..++.. ....+++||+.++.|++.....-.... ..++
T Consensus 49 nPt~~~lE~~lA~l~-g~~~~~~~~sG~~Ai~~al~a--ll~~GD~Vl~~~~~y~~t~~~~~~~~~----------~~gi 115 (377)
T TIGR01324 49 TLTHFALQDAMCELE-GGAGCYLYPSGLAAVTNSILA--FVKAGDHVLMVDSAYEPTRYFCDIVLK----------RMGV 115 (377)
T ss_pred CccHHHHHHHHHHHh-CCCcEEEECcHHHHHHHHHHH--hcCCCCEEEEcCCCcHHHHHHHHHHHH----------hcCc
Confidence 334466777777766 567899999999999999984 244567888888898874321111000 0111
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCC
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAY 296 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~ 296 (474)
++..++.++.+.+++.++ +++++|++|.+.|++|.+.+ +++|.++|++||+++|+||+|. |+.
T Consensus 116 ------~v~~~d~~~~e~l~~~i~---~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a~g~~--- 179 (377)
T TIGR01324 116 ------DITYYDPLIGEDIATLIQ---PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWAAGLL--- 179 (377)
T ss_pred ------EEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCccccc---
Confidence 233333444577888776 36889999999999988887 9999999999999999999994 331
Q ss_pred CccccccCCCCcee--ehhhhcCC--CcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
+.. .....|++ +++|.++| +.-.|+++++++.++.+.. ..... ....+|..+...+..++.+ .-..++
T Consensus 180 -~~p--l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~--~~~~~-G~~l~p~~a~~~~rgl~tl--~~R~~~ 251 (377)
T TIGR01324 180 -FKP--LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLRE--HSYLM-GQMVDADDAYTTLRGLRTL--GVRLKQ 251 (377)
T ss_pred -cCc--cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHH--HHHHh-CCCCCHHHHHHHHhhhhhH--HHHHHH
Confidence 111 12234665 57999984 4668888998887776652 11122 2345666666655555533 234556
Q ss_pred HHHHHHHHHHHHHH
Q 011959 373 LNKITGELTQGIID 386 (474)
Q Consensus 373 ~~~~~~~l~~~L~~ 386 (474)
..++...+.+.|++
T Consensus 252 ~~~~a~~la~~L~~ 265 (377)
T TIGR01324 252 HQESSLAIAKWLSE 265 (377)
T ss_pred HHHHHHHHHHHHHh
Confidence 66666666666665
No 278
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.71 E-value=1.3e-15 Score=152.34 Aligned_cols=239 Identities=14% Similarity=0.073 Sum_probs=154.1
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
+++...+|.+.++++. +.+.+++++||+.|+..++.. ....++.||+..+.|.+ +...+....
T Consensus 57 ~~p~~~~le~~lA~l~-g~~~av~~~sG~~Ai~~~l~a--l~~~Gd~Vi~~~~~y~~-t~~~~~~~~------------- 119 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLE-GTEAAVATSSGMGAIAATLLT--ILKAGDHLISDECLYGC-TFALLEHAL------------- 119 (391)
T ss_pred CCchHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHH--HhCCCCEEEEecCcchH-HHHHHHHHH-------------
Confidence 4556678888888888 556789999999999988873 23456677776665543 222221100
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
...+.++..++.+|++++++.+.. ++++|++|.++|++|.+.+ +++|.++|++||+++|+||+|.....+.
T Consensus 120 --~~~G~~~~~vd~~d~e~l~~~i~~---~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~~~~~~ 190 (391)
T TIGR01328 120 --TKFGIQVDFINMAIPEEVKAHIKD---NTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFATPMLTN 190 (391)
T ss_pred --hcCCeEEEEECCCCHHHHHHhhcc---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCchhccCC
Confidence 001123555666689999888863 5789999998899999888 9999999999999999999995211111
Q ss_pred CccccccCCCCcee--ehhhhcCC-Ccc-eEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-GLP-VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G~~-iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
..+...|++ +++|.+++ |.+ .|++++++++++.++........ ....+|..++.++..|+.+ +..+++
T Consensus 191 -----~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~-g~~l~~~~a~l~l~~L~tl--~~r~~~ 262 (391)
T TIGR01328 191 -----PVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMT-GSVISPFDAWLILRGLKTL--NIRMKR 262 (391)
T ss_pred -----chhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCC-CCCCCcHHHHHHHhCcCcH--HHHHHH
Confidence 122234655 68899985 666 46678889988777631111111 2345677766666655433 344566
Q ss_pred HHHHHHHHHHHHHHHhh----hcC-Ce---------eEEeeeceeEEEEEe
Q 011959 373 LNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (474)
..++..++.+.|++... .+| +. ...++.|.++.|+++
T Consensus 263 ~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~ 313 (391)
T TIGR01328 263 HSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK 313 (391)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC
Confidence 67777777777765310 011 00 012356888888885
No 279
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.70 E-value=6e-15 Score=147.54 Aligned_cols=237 Identities=16% Similarity=0.134 Sum_probs=148.7
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++...+|.+.+++++ +.+.+++++||++|+..++.. ....++.||+....|.+.........
T Consensus 59 ~~p~~~~le~~la~l~-g~~~~v~~ssG~~Ai~~al~a--l~~~Gd~Vi~~~~~y~~t~~~~~~~~-------------- 121 (390)
T PRK08133 59 TNPTVTMFQERLAALE-GAEACVATASGMAAILAVVMA--LLQAGDHVVSSRSLFGSTVSLFEKIF-------------- 121 (390)
T ss_pred CChHHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHH--HhCCCCEEEEccCcchhHHHHHHHHH--------------
Confidence 3555678888888887 456789999999999999874 23456777776666554322111100
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
...+.++..++.+|++++++.++. ++++|++|.++|++|.+.+ +++|.++|++||++||+|+++.......
T Consensus 122 --~~~G~~v~~vd~~d~~~l~~~i~~---~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~~~~~ 192 (390)
T PRK08133 122 --ARFGIETTFVDLTDLDAWRAAVRP---NTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTPALQQ 192 (390)
T ss_pred --HHcCcEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 001123555666789999988863 6789999988888999988 9999999999999999999984221111
Q ss_pred CccccccCCCCcee--ehhhhcCC-Ccce-EEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G~~i-G~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
. . ..| .|++ +++|.+++ |.++ |++++++++++.+.. .........++..+..++..++.+ ....++
T Consensus 193 p--l-~~g--~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~---~~~~~g~~~~~~~a~~~l~gl~tl--~~R~~~ 262 (390)
T PRK08133 193 P--L-KLG--ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFG---FLRTAGPTLSPFNAWVFLKGLETL--SLRMEA 262 (390)
T ss_pred c--h-hhC--CcEEEeecceeecCCcceEeEEEEcCHHHHHHHHH---HHHHhCCCCCHHHHHHHHcccchH--HHHHHH
Confidence 1 1 123 3655 68999985 7887 455778877665542 111122344566555544444322 233445
Q ss_pred HHHHHHHHHHHHHHHhh----hcC-Cee---------EEeeeceeEEEEEe
Q 011959 373 LNKITGELTQGIIDAGK----KAG-HAI---------CGGYISGMFGFFFT 409 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~----~~~-~~~---------~v~~~g~~~~i~~~ 409 (474)
..++...+.+.|++... .+| +.. ...+.|.|+.|++.
T Consensus 263 ~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~ 313 (390)
T PRK08133 263 HSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK 313 (390)
T ss_pred HHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 55666666666654310 011 000 12466888899885
No 280
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=2e-14 Score=143.91 Aligned_cols=214 Identities=17% Similarity=0.150 Sum_probs=136.0
Q ss_pred CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCcccCCCccccccC-CCCce
Q 011959 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFG-VTPDL 309 (474)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~r~g~~~~~~~~g-~~pdi 309 (474)
|.++++++++. .+..|++....+. +...| +++|+++|++||++|++|++| .|+..+..+..+... -..|+
T Consensus 208 D~d~l~~~~~~---~~plvii~g~S~~-~~~~d----l~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~ 279 (493)
T PRK13580 208 DYDEIAALARE---FKPLILVAGYSAY-PRRVN----FAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADI 279 (493)
T ss_pred CHHHHHHHHhh---cCCEEEEeCcccc-CCCcC----HHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcE
Confidence 78999999875 3455555554444 44667 999999999999999999999 566222222111111 13565
Q ss_pred e--ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHH
Q 011959 310 T--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGI 384 (474)
Q Consensus 310 ~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L 384 (474)
+ |++|+|.|. +.|++++++++.+.+....+ +.+++ ..+| .++++..++..+.++ ++.+++.++.++|++.|
T Consensus 280 vtgT~hKaL~GP-~GG~I~~~~~l~~~L~~a~P-~i~gg-~l~p-~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L 355 (493)
T PRK13580 280 VTTTTHKTLRGP-RGGLVLAKKEYADAVDKGCP-LVLGG-PLPH-VMAAKAVALAEARTPEFQKYAQQVVDNARALAEGF 355 (493)
T ss_pred EEeCChhhccCC-CeEEEEecHHHHHHHhhCCC-cccCC-CccH-HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHH
Confidence 5 689999542 36778889999988853322 23332 2233 444444456555443 37889999999999999
Q ss_pred HHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC----------cceEEe--
Q 011959 385 IDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------EAGFTS-- 452 (474)
Q Consensus 385 ~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------~~~~~~-- 452 (474)
.+.+.+. .. -.....++.+.+.+. ......+.+.|.+.||++.+... ..+|+.
T Consensus 356 ~~~G~~v--v~-ggTdshIV~V~lg~~------------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~ 420 (493)
T PRK13580 356 LKRGARL--VT-GGTDNHLVLIDVTSF------------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTP 420 (493)
T ss_pred HhcCCCc--cC-CCCCCCEEEEEeCCH------------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccc
Confidence 8764321 10 011234555555321 11224567788999999975432 235663
Q ss_pred c----CCcHHHHHHHHHHHHHHHh
Q 011959 453 L----AHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 453 ~----~~t~e~i~~~l~~l~~~~~ 472 (474)
. .++++|++++++.|.++++
T Consensus 421 A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 421 ALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred hhhhcCCCHHHHHHHHHHHHHHHH
Confidence 2 5579999999999998875
No 281
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.69 E-value=1.7e-14 Score=147.58 Aligned_cols=280 Identities=19% Similarity=0.207 Sum_probs=162.7
Q ss_pred HHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHh----cCCCCccCCCCCCCCC
Q 011959 143 VLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK----AGSGVATLGLPDSPGV 217 (474)
Q Consensus 143 ~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~----~g~~~~~~~~~~~~g~ 217 (474)
++.++++++++ +.+.+.+++||+++++.++. ++...++++|++.++ +|+.....+.. .|..+..++.... .
T Consensus 116 e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~-a~~~~~g~~Vlv~~~-~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~- 191 (447)
T PRK00451 116 EYQTMICELTGMDVANASMYDGATALAEAALM-AVRITKRKKVLVSGA-VHPEYREVLKTYLKGQGIEVVEVPYEDG-V- 191 (447)
T ss_pred HHHHHHHHHhCCCcceEEecCcHHHHHHHHHH-HHHhcCCCEEEEeCc-cCHHHHHHHHHHHHhCCcEEEEecCCCC-C-
Confidence 44466688876 45678999999998887776 323345677777665 55544444332 2332222111100 1
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE--eccccCcccC
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGFRLA 295 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~--DEv~~g~r~g 295 (474)
-|++++++.++ +++++|+++.. +++|.+.+ +++|.++|+++|+++|+ |.+..|+.
T Consensus 192 -------------~d~~~l~~~i~---~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~~-- 248 (447)
T PRK00451 192 -------------TDLEALEAAVD---DDTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGLL-- 248 (447)
T ss_pred -------------CCHHHHHHhcC---CCeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhccC--
Confidence 17899998886 35778777765 67899988 99999999999999998 65544331
Q ss_pred CCccccccCCCCcee-----ehhhhcC-CCcceEEEEecHHHHHhhcCC------------------------CCccc-c
Q 011959 296 YGGAQEYFGVTPDLT-----TLGKIIG-GGLPVGAYGGRRDIMEMVAPA------------------------GPMYQ-A 344 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~-----t~sK~l~-~G~~iG~~~~~~~i~~~~~~~------------------------~~~~~-~ 344 (474)
..... ...|++ .|||.+. +|+++|++++++++++.+... .+..+ .
T Consensus 249 --~~~~~--~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (447)
T PRK00451 249 --KPPGE--YGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKAT 324 (447)
T ss_pred --CCccc--CCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccccccccccccc
Confidence 01112 234665 3567666 678999999999988875210 00011 1
Q ss_pred cCCCCChHHH-HHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCccccc
Q 011959 345 GTLSGNPLAM-TAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 420 (474)
Q Consensus 345 ~t~~~~~~~~-aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~ 420 (474)
.+++.+...+ .++..+++.+.+ ++..+++.++.++++++|+++ +.. .+. .+.++.+...+-
T Consensus 325 ~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----~g~-~~~-~~~~~~~~~v~~--------- 389 (447)
T PRK00451 325 SNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI----GGV-ELF-DGPFFNEFVVRL--------- 389 (447)
T ss_pred ccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc----CCE-Eec-CCCeEEEEEEec---------
Confidence 1112222122 233334544432 445566666777777777654 211 111 122222111110
Q ss_pred ccchHHHHHHHHHHHHCCeEec----ccC---CcceEEec--CCcHHHHHHHHHHHHHHH
Q 011959 421 KSETTKFARFYRGMLEEGVYFA----PSQ---FEAGFTSL--AHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 421 ~~~~~~~~~~~~~l~~~Gv~v~----~~~---~~~~~~~~--~~t~e~i~~~l~~l~~~~ 471 (474)
+. ...++.+.|.++|+... +.. ...+|++. .+|+++++++++.|++++
T Consensus 390 -~~--~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 390 -PK--PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred -CC--CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 00 12578899999987642 111 12456654 589999999999998865
No 282
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.69 E-value=1.2e-14 Score=145.61 Aligned_cols=237 Identities=17% Similarity=0.157 Sum_probs=154.1
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
+.++...+|+++++++.+. +..++++||++|+..++.. ....++.|++..+.|++.......... ..
T Consensus 57 ~~~p~~~~Le~~lA~l~g~-~~~v~~~sG~~Ai~~~l~a--ll~pGD~Vvv~~p~Y~~t~~~~~~~~~----------~~ 123 (405)
T PRK08776 57 SGNPTRDLLGEALAELEGG-AGGVITATGMGAINLVLNA--LLQPGDTLVVPHDAYGGSWRLFNALAK----------KG 123 (405)
T ss_pred CCChHHHHHHHHHHHHhCC-CceEEEcCHHHHHHHHHHH--HhCCCCEEEEccCCchHHHHHHHHHHH----------hc
Confidence 3455567788888887754 5567788899999988874 234567888888888763321111100 00
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC-ccc
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG-FRL 294 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g-~r~ 294 (474)
+ ..+..++..|++++++.++. ++++|+++.++|++|.+.+ +++|.++|++||++||+||+|.. ...
T Consensus 124 g------~~v~~v~~~d~~~l~~~i~~---~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~~~~ 190 (405)
T PRK08776 124 H------FALITADLTDPRSLADALAQ---SPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSPALQ 190 (405)
T ss_pred C------cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 1 12444555689999988863 5788888888888999877 99999999999999999999952 111
Q ss_pred CCCccccccCCCCcee--ehhhhcCC--CcceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCH
Q 011959 295 AYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (474)
Q Consensus 295 g~~~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (474)
.. .+ +| .|++ +.+|.++| ++..|++++ ++++.+.+.. ......+..+|+.+...+..++.+ +..
T Consensus 191 -~p--l~-~g--aDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~---~~~~~g~~~s~~~a~l~~~gl~tl--~~r 259 (405)
T PRK08776 191 -KP--LE-FG--ADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVW---WANALGLTGSPFDAFLTLRGLRTL--DAR 259 (405)
T ss_pred -Cc--cc-cc--CCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHH---HHHhcCCCCCHHHHHHHHhhhCcH--HHH
Confidence 11 11 23 4555 67899984 467888866 5677666642 111223356888888877666544 446
Q ss_pred HHHHHHHHHHHHHHHHHHh--hh--cC-Ce---------eEEeeeceeEEEEEe
Q 011959 370 YEYLNKITGELTQGIIDAG--KK--AG-HA---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~--~~--~~-~~---------~~v~~~g~~~~i~~~ 409 (474)
.++..++...+.+.|++.- .+ +| +. ....+.|.|+.|++.
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 260 LRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 6677777777777776531 00 11 00 012467889999985
No 283
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.69 E-value=5e-14 Score=143.45 Aligned_cols=312 Identities=16% Similarity=0.116 Sum_probs=178.8
Q ss_pred CCHHHHHHHHHHHH-h-cCC------CCCCCHHHHHHH----HHHHhhCCCCCeEE-E---eCCHHHHHHHHHHHhHhhc
Q 011959 116 ADDQVLAALGETMK-K-GTS------FGAPCLLENVLA----EMVISAVPSIEMVR-F---VNSGTEACMGVLRLARAFT 179 (474)
Q Consensus 116 ~~p~v~~a~~~~~~-~-~~~------~~~~~~~~~~la----~~l~~~~~~~~~v~-~---~~sGseA~~~al~~ar~~~ 179 (474)
..|.|++++...+. + +.+ +++ +....++. ++..+.+...+..+ + .+||+.||.+++. ++.
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G-~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~---aL~ 121 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGG-NEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYT---ALL 121 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCC-ChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHH---HhC
Confidence 46889999988883 3 211 122 22333332 23555564333333 2 3899999999998 444
Q ss_pred C-CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC------CHHHHHHHHhcCCCCeEEEEE
Q 011959 180 G-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN------DVSALENLFENNKGEIAAIIL 252 (474)
Q Consensus 180 ~-~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~------d~~~le~~l~~~~~~~a~vi~ 252 (474)
+ ++.|+..+-...|+........|..+. ..+ ...+.+.+++| |+++|++++.++ +++.|++
T Consensus 122 ~pgD~Il~~d~~~gGhl~H~~~~~g~~~s------~~~----~~~~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~ 189 (475)
T PLN03226 122 QPHDRIMGLDLPHGGHLSHGYQTDGKKIS------ATS----IYFESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIA 189 (475)
T ss_pred CCCCEEEECCCCcCcchhhhhhhcccccc------cce----EEEEeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEE
Confidence 4 466665443222221111111111000 000 00012244455 899999998754 3445555
Q ss_pred -ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCCCCcee--ehhhhcCCCcceEEEEe
Q 011959 253 -EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGG 327 (474)
Q Consensus 253 -ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~ 327 (474)
++++ |...+ +++|+++|++||++|++|++| .|+ ..+. .. ..++ ..|++ |++|+|.|. +.|++++
T Consensus 190 ~~S~~---s~~~D----~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~-~~-~p~~-~~Div~~t~hK~L~GP-~Gg~I~~ 258 (475)
T PLN03226 190 GASAY---PRDWD----YARMRKIADKVGALLMCDMAHISGLVAAQE-AA-SPFE-YCDVVTTTTHKSLRGP-RGGMIFF 258 (475)
T ss_pred ecCcC---CCccC----HHHHHHHHHHcCCEEEEEchhhhCcccCCC-CC-CCCC-CCeEEEecCcccccCC-CceEEEE
Confidence 5544 44555 888999999999999999999 566 3221 11 1122 35665 688999642 3466677
Q ss_pred cHHHH-----------Hh---hcCCCCcccccCCCCChHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhh
Q 011959 328 RRDIM-----------EM---VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKK 390 (474)
Q Consensus 328 ~~~i~-----------~~---~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~ 390 (474)
++++. +. +.. ...... +-+.++..+++..++|+.+.+. .+.+++.++.++|++.|.+.
T Consensus 259 ~~~~~~~~~~g~~~~~d~~~~i~~-a~~~~~-~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~--- 333 (475)
T PLN03226 259 RKGPKPPKGQGEGAVYDYEDKINF-AVFPGL-QGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK--- 333 (475)
T ss_pred chhhcccccCCCccHHHHHHHhcc-ccCCcc-CCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC---
Confidence 77544 22 221 111112 2235566677777889988653 36788888899998888764
Q ss_pred cCCeeEEee-eceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC---------CcceEE------ecC
Q 011959 391 AGHAICGGY-ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---------FEAGFT------SLA 454 (474)
Q Consensus 391 ~~~~~~v~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------~~~~~~------~~~ 454 (474)
++.....+ ...++.+.+.... ....++.+.|.+.||++.... .+.+|+ +..
T Consensus 334 -G~~l~~~~t~~hi~lv~~~~~g------------i~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g 400 (475)
T PLN03226 334 -GYKLVTGGTDNHLVLWDLRPLG------------LTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRG 400 (475)
T ss_pred -CCEEEcCCCCCCEEEEEccCCC------------CCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCC
Confidence 22211111 1344455552211 112456677778899886542 234554 468
Q ss_pred CcHHHHHHHHHHHHHHHh
Q 011959 455 HSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 455 ~t~e~i~~~l~~l~~~~~ 472 (474)
++++|++++.+.|.++++
T Consensus 401 ~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 401 LVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 899999999999999886
No 284
>PLN03032 serine decarboxylase; Provisional
Probab=99.69 E-value=3.7e-14 Score=139.50 Aligned_cols=305 Identities=14% Similarity=0.059 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHh--cCCCC------CCCHHHHHHHHHHHhhCC-CCCeE--EEeCCHHHHHHHHHHHhHhhcCCcEEEE
Q 011959 118 DQVLAALGETMKK--GTSFG------APCLLENVLAEMVISAVP-SIEMV--RFVNSGTEACMGVLRLARAFTGRERIIK 186 (474)
Q Consensus 118 p~v~~a~~~~~~~--~~~~~------~~~~~~~~la~~l~~~~~-~~~~v--~~~~sGseA~~~al~~ar~~~~~~~ii~ 186 (474)
+.+++++.+.+.+ +..+. ...+.+.++.+++++.++ +.+.+ +||+||||||..++..+|....+ .+++
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~-~~vi 115 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPD-GILY 115 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCC-cEEE
Confidence 3456666666543 21111 124677888999999886 34555 99999999999999988865443 3566
Q ss_pred EeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCH
Q 011959 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (474)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (474)
....-|-+..-++...+..+..++.. ..|. -|+++|++.|+++..++.+|++.-.++++|.+.|
T Consensus 116 ~s~~~H~Sv~kaa~~lg~~~~~V~~d-~~g~-------------id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp-- 179 (374)
T PLN03032 116 ASRESHYSVFKAARMYRMEAVKVPTL-PSGE-------------IDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD-- 179 (374)
T ss_pred eCCCceeHHHHHHHHcCCCCeEeeeC-CCCc-------------CcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC--
Confidence 66677776666665555433222111 1111 1899999999864445677778777788999999
Q ss_pred HHHHHHHHHHHHhC-----CEEEEeccccCc-cc--C--CCccccccCCCCceeeh--hhhcCCCcceEEEEecHHHHHh
Q 011959 267 DFLNAIRRITKENG-----ALLIFDEVMTGF-RL--A--YGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEM 334 (474)
Q Consensus 267 ~~l~~l~~l~~~~g-----~llI~DEv~~g~-r~--g--~~~~~~~~g~~pdi~t~--sK~l~~G~~iG~~~~~~~i~~~ 334 (474)
+++|.++|++|| +++++|-++.|+ -. . ..+.+ ....|.+++ -|.++...++|.++.+++.++.
T Consensus 180 --i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~---~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~ 254 (374)
T PLN03032 180 --LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF---RKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKA 254 (374)
T ss_pred --HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC---CcCCcEEEECcccccCCCcCeEEEEEEchhhHh
Confidence 999999999997 589999999765 21 1 11111 123576765 4766656789999998887766
Q ss_pred hcCCCCccc--ccCCCCCh--HHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEE
Q 011959 335 VAPAGPMYQ--AGTLSGNP--LAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (474)
Q Consensus 335 ~~~~~~~~~--~~t~~~~~--~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (474)
+.....+.. ..|..++. ...+...++|+.+-. .+..++..++.+++.+.|++. +......+..+. +.
T Consensus 255 ~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~p~~~~--V~ 328 (374)
T PLN03032 255 LSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA----GLTCRLNELSST--VV 328 (374)
T ss_pred hccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEEECCCceE--EE
Confidence 642211110 11333332 344555566766554 345666777788888888764 322222222222 22
Q ss_pred EecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-cceEEecCCcHHHHHHHHHHHHH
Q 011959 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTSLAHSSDDIQHTITAAEK 469 (474)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~~~~~~~~t~e~i~~~l~~l~~ 469 (474)
|..+ .. . . +.+|-.+.+... -++.+...++++.+|++++-|++
T Consensus 329 f~~~-----------~~---~----~-~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 329 FERP-----------MD---E----A-FIKKWQLACEGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred EcCC-----------Cc---H----h-HhheeeecccCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 3221 11 1 1 224554444321 12233455688999999998875
No 285
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=1.3e-14 Score=145.04 Aligned_cols=210 Identities=13% Similarity=0.046 Sum_probs=134.5
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhH---HHhcCCCCccCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLP 212 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~ 212 (474)
++++...+|.+.++++. +.+.+++++||++|+..++... ...++.||+.++.|.+..... ....|.
T Consensus 62 ~~~pt~~~Le~~lA~l~-g~~~~l~~~sgt~Ai~~~l~al--~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi-------- 130 (394)
T PRK07050 62 HATPTSLALAQRLAEIE-GGRHALLQPSGLAAISLVYFGL--VKAGDDVLIPDNAYGPNRDHGEWLARDFGI-------- 130 (394)
T ss_pred CCCHHHHHHHHHHHHHh-CCCeEEEeccHHHHHHHHHHHH--hCCCCEEEEecCCcccHHHHHHHHHHhcCe--------
Confidence 45666788888888887 5679999999999999999842 445678888888887643211 111121
Q ss_pred CCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C
Q 011959 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G 291 (474)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g 291 (474)
++..++..+.+++++.++. ++++|++|.+.|++|.+.+ +++|.++|++||++||+|++|. +
T Consensus 131 -----------~v~~vd~~~~~~l~~~i~~---~tklV~le~p~Np~~~~~d----i~~I~~ia~~~gi~livD~a~a~~ 192 (394)
T PRK07050 131 -----------TVRFYDPLIGAGIADLIQP---NTRLIWLEAPGSVTMEVPD----VPAITAAARARGVVTAIDNTYSAG 192 (394)
T ss_pred -----------EEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCccHhh----HHHHHHHHHHcCCEEEEECCcccc
Confidence 2333443456778888763 5788999888887776665 9999999999999999999994 2
Q ss_pred cccCCCccccccCCCCcee--ehhhhcCCC--cceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC
Q 011959 292 FRLAYGGAQEYFGVTPDLT--TLGKIIGGG--LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 366 (474)
Q Consensus 292 ~r~g~~~~~~~~g~~pdi~--t~sK~l~~G--~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 366 (474)
.. ...-..| .|++ +++|.++|| .+.|++++ ++++++.++. .......+.+|..+..++ +-++.
T Consensus 193 ~~----~~~l~~G--aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~---~~~~~G~~~~~~~a~l~l---r~l~t 260 (394)
T PRK07050 193 LA----FKPFEHG--VDISVQALTKYQSGGSDVLMGATITADAELHAKLKL---ARMRLGIGVSADDCSLVL---RGLPS 260 (394)
T ss_pred cc----cCHHHcC--CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHH---HHHhcCCCCCHHHHHHHH---cCCCc
Confidence 21 1111123 3655 689999854 57888765 6777777652 111112244555544333 32222
Q ss_pred -CCHHHHHHHHHHHHHHHHHH
Q 011959 367 -PGTYEYLNKITGELTQGIID 386 (474)
Q Consensus 367 -~~~~~~~~~~~~~l~~~L~~ 386 (474)
....++..++...+.+.|++
T Consensus 261 l~~Rl~~~~~~a~~la~~L~~ 281 (394)
T PRK07050 261 LQVRLAAHDRSALEVAEWLKA 281 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 22334444555555555554
No 286
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.68 E-value=7.6e-15 Score=145.61 Aligned_cols=212 Identities=16% Similarity=0.105 Sum_probs=137.8
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
++++...+|.++++++. + +.+++++||++|+..++.. ....+++||+.+++|++....+..... ..
T Consensus 48 y~~p~~~~Le~~lA~l~-~-~~~v~~~sG~~Ai~~~l~a--ll~~Gd~Vl~~~~~y~~~~~~~~~~l~----------~~ 113 (366)
T PRK07582 48 ASNPTWRALEAALGELE-G-AEALVFPSGMAAITAVLRA--LLRPGDTVVVPADGYYQVRALAREYLA----------PL 113 (366)
T ss_pred CCCccHHHHHHHHHHHc-C-CCEEEECCHHHHHHHHHHH--hcCCCCEEEEeCCCcHhHHHHHHHHHh----------cC
Confidence 45566778888888887 3 5677778899999988873 244567899988999775433211100 00
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccC
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (474)
| .++..++.++... ... +++++|++|.++|++|.+.+ +++|.++|+++|+++|+||+|... .+
T Consensus 114 G------~~v~~v~~~~~~~--~~~----~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~-~~ 176 (366)
T PRK07582 114 G------VTVREAPTAGMAE--AAL----AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATP-LG 176 (366)
T ss_pred e------EEEEEECCCChHH--Hhc----cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCc-cc
Confidence 1 1344455444321 222 36788889888888888877 999999999999999999998421 11
Q ss_pred CCccccccCCCCcee--ehhhhcCC--CcceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHH
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (474)
. ..+....|++ +++|.++| |+++||+++ ++++++.+.. .........+|+.+..++..|+.+ +...
T Consensus 177 ~----~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~---~~~~~g~~~~~~~a~l~~r~l~tl--~~R~ 247 (366)
T PRK07582 177 Q----RPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVER---WRLLAGAIPGPFEAWLAHRSLGTL--GLRF 247 (366)
T ss_pred c----CchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccccH--HHHH
Confidence 0 1112234655 68999974 689999987 4777776652 112223345677766666555533 3344
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011959 371 EYLNKITGELTQGIIDA 387 (474)
Q Consensus 371 ~~~~~~~~~l~~~L~~~ 387 (474)
++..++...+.+.|++.
T Consensus 248 ~~~~~na~~la~~L~~~ 264 (366)
T PRK07582 248 ARQCANALAVAELLAGH 264 (366)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 66777777777777754
No 287
>PRK02769 histidine decarboxylase; Provisional
Probab=99.68 E-value=9.1e-14 Score=137.76 Aligned_cols=287 Identities=16% Similarity=0.091 Sum_probs=178.6
Q ss_pred CHHHHHHHHHHHhhCC-CCCe--EEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCC
Q 011959 138 CLLENVLAEMVISAVP-SIEM--VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 214 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~-~~~~--v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 214 (474)
.+.+.++.+++++.++ ..+. .+||+||||+|..++..+|.+.+++. |+....-|.....++...|.+...++.. .
T Consensus 64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~-ii~s~~~H~Sv~ka~~~lg~~~~~V~~~-~ 141 (380)
T PRK02769 64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGT-LYYSKDTHYSVSKIARLLRIKSRVITSL-P 141 (380)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcE-EEeCCCceehHHHHHHHcCCCCceeccC-C
Confidence 3567788888888886 2233 58999999999999998876555444 4444555665555555545433222111 0
Q ss_pred CCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhC---CEEEEeccccC
Q 011959 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG---ALLIFDEVMTG 291 (474)
Q Consensus 215 ~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g---~llI~DEv~~g 291 (474)
.+. -|+++|++.+++.+..+.+|++.-..+++|.+.| +++|.++|++|| +++++|-+|.|
T Consensus 142 ~g~-------------id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg 204 (380)
T PRK02769 142 NGE-------------IDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSG 204 (380)
T ss_pred CCc-------------CcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccc
Confidence 110 1899999999865445788888888889999999 999999999998 69999999987
Q ss_pred c-cc--CC--CccccccCCCCceeehh--hhcCCCcceEEEEecHHHHHhhcCCCCccc--ccCCCC--ChHHHHHHHHH
Q 011959 292 F-RL--AY--GGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ--AGTLSG--NPLAMTAGIHT 360 (474)
Q Consensus 292 ~-r~--g~--~~~~~~~g~~pdi~t~s--K~l~~G~~iG~~~~~~~i~~~~~~~~~~~~--~~t~~~--~~~~~aaa~aa 360 (474)
+ -. .. .+... . ..|.+++| |.+++..++|.++.+++..+.+........ -.|+.+ |..+.++..++
T Consensus 205 ~~~p~~~~~~~~d~~--~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~a 281 (380)
T PRK02769 205 MILPFVNNPPPFSFA--D-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAA 281 (380)
T ss_pred eeecccCccccCCcc--C-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHH
Confidence 5 21 01 11111 1 46777654 877766789999999887766542111100 012223 33455666677
Q ss_pred HHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHC
Q 011959 361 LKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE 437 (474)
Q Consensus 361 l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 437 (474)
|+.+.. .+..++..++.+++.++|++. ++..-..+..+. +.|.. ++ ..+ .+
T Consensus 282 L~~lg~~G~~~~~~~~~~la~~l~~~L~~~----g~~~~~~p~~~~--v~f~~-----------~~----~~~-----~~ 335 (380)
T PRK02769 282 IRSLGSKGLRQRVQHCLDMAQYAVDRLQAN----GIPAWRNPNSIT--VVFPC-----------PS----ERI-----WK 335 (380)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHhC----CCEEEcCCCceE--EEEcC-----------CC----HHH-----Hh
Confidence 777655 455667777778888877653 322222222222 22221 21 111 14
Q ss_pred CeEecccCC-cceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 438 GVYFAPSQF-EAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 438 Gv~v~~~~~-~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
|..+.+... -++.+...+|+|.+|++++-|.+.+.
T Consensus 336 ~w~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 336 KWHLATSGNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred CeeEcccCCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 555554432 12344566799999999999987654
No 288
>PRK05968 hypothetical protein; Provisional
Probab=99.68 E-value=1.3e-14 Score=145.17 Aligned_cols=250 Identities=17% Similarity=0.159 Sum_probs=155.4
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
..+...+|.++++++. +.+..++++||+.|+..++.. ....+++||+....|++.......... ..|
T Consensus 61 ~~p~~~~le~~lA~l~-g~~~av~~~sG~~Ai~~al~a--l~~~Gd~Vl~~~~~y~~t~~~~~~~~~----------~~G 127 (389)
T PRK05968 61 DNPTVRAFEEMLAKLE-GAEDARGFASGMAAISSTVLS--FVEPGDRIVAVRHVYPDAFRLFETILK----------RMG 127 (389)
T ss_pred CChhHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHH--HhCCCCEEEEeCCCchHHHHHHHHHHH----------HcC
Confidence 4555778888888888 445667779999999998873 234567888888887764321111100 001
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
.++..++.+|++++++.+. ++++|++|.+.|..+.+.+ +++|.++|++||+++|+|++|.......
T Consensus 128 ------~~v~~vd~~d~~~l~~~i~----~tklV~ie~pt~~~~~~~d----l~~i~~la~~~gi~vivD~a~a~~~~~~ 193 (389)
T PRK05968 128 ------VEVDYVDGRDEEAVAKALP----GAKLLYLESPTSWVFELQD----VAALAALAKRHGVVTMIDNSWASPVFQR 193 (389)
T ss_pred ------ceEEEeCCCCHHHHHHhcc----cCCEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcchhccC
Confidence 1244445558899988873 4678888876666555544 9999999999999999999995321111
Q ss_pred CccccccCCCCcee--ehhhhcCC-C-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
. . .+|. |++ +++|.+++ | ++.|++++++++++.++.......+ ...++..++.++..|+.+ +...++
T Consensus 194 p--~-~~g~--Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g--~~~~~~~A~~~l~~L~tl--~~r~~~ 264 (389)
T PRK05968 194 P--I-TLGV--DLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLG--AKLSPFEAWLLLRGLRTL--PLRMKA 264 (389)
T ss_pred c--h-hcCC--cEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCC--CCCChHHHHHHHcccCcH--HHHHHH
Confidence 1 1 1343 554 78999985 4 5788888899988776531111111 345676766666655533 334455
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeeEE-------------eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCe
Q 011959 373 LNKITGELTQGIIDAGKKAGHAICG-------------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 439 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~v-------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 439 (474)
..++.+++.+.|++ ++.+..+ .+.|.++.|++.+ .....+|.+.|...++
T Consensus 265 ~~~~a~~la~~L~~----~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-------------~~~~~~f~~~L~~~~~ 327 (389)
T PRK05968 265 HEASALEIARRLKA----HPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-------------GIDVRAFADALKLFRL 327 (389)
T ss_pred HHHHHHHHHHHHHh----CCCccEEECCCCCCChHHhCCCCceEEEEEECC-------------HHHHHHHHHhCCccEE
Confidence 55556666666654 3322222 1456788888742 1223567777655443
No 289
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.67 E-value=1.6e-14 Score=144.99 Aligned_cols=216 Identities=16% Similarity=0.164 Sum_probs=144.3
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
+.+...+|.+.++++.+ .+..++++||+.|+..+++. ....+++||+..+.| +.+.......-
T Consensus 63 ~~p~~~~le~~lA~l~g-~~~~i~~~sG~~Al~~~l~~--ll~~Gd~Viv~~~~y-~~t~~~~~~~~------------- 125 (403)
T PRK07503 63 SNPTLALLEQRMASLEG-GEAAVALASGMGAITATLWT--LLRPGDEVIVDQTLY-GCTFAFLHHGL------------- 125 (403)
T ss_pred CCchHHHHHHHHHHHhC-CCcEEEEcCHHHHHHHHHHH--HcCCCCEEEEccCcc-chHHHHHHHHH-------------
Confidence 45556788888888774 45678888999999999974 244567787776655 43332221100
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
...+.++..++.+|++++++.++. ++++|++|.++|++|.+.+ +++|.++|++||++||+|++|.....+.
T Consensus 126 --~~~G~~v~~vd~~d~~~l~~~i~~---~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~~~~~ 196 (403)
T PRK07503 126 --GEFGVTVRHVDLTDPAALKAAISD---KTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTPYLQR 196 (403)
T ss_pred --hhCCEEEEEeCCCCHHHHHHhcCc---cCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 001123455566689999998863 5788999988888999988 9999999999999999999995321111
Q ss_pred CccccccCCCCcee--ehhhhcCC-C-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
. .+...|++ +++|.+++ | .+.|++++++++++.++... .........+++.++.++..|+.+ +...++
T Consensus 197 ~-----l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~-~~~~~g~~~s~~~a~l~l~~L~tl--~~r~~~ 268 (403)
T PRK07503 197 P-----LELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEG-LKDMTGAVMSPFDAFLLMRGLKTL--ALRMDR 268 (403)
T ss_pred c-----hhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhh-HHhCcCCCCCHHHHHHHHcCcchH--HHHHHH
Confidence 1 12334655 68999995 5 78898898899888775210 011123566788777776666544 234445
Q ss_pred HHHHHHHHHHHHHH
Q 011959 373 LNKITGELTQGIID 386 (474)
Q Consensus 373 ~~~~~~~l~~~L~~ 386 (474)
..++...+.+.|++
T Consensus 269 ~~~na~~~a~~L~~ 282 (403)
T PRK07503 269 HCASAQAVAEWLAR 282 (403)
T ss_pred HHHHHHHHHHHHHh
Confidence 55666666666654
No 290
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.67 E-value=2.1e-14 Score=144.88 Aligned_cols=163 Identities=18% Similarity=0.153 Sum_probs=118.6
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
+.++...+|.++++++. +.+.+++++||++|+..+++.. ...+++||+.++.|++.......... ..
T Consensus 54 ~~~p~~~~le~~lA~l~-g~~~~v~~~sG~~Ai~~al~~l--~~~Gd~Vl~~~~~y~~t~~~~~~~~~----------~~ 120 (418)
T TIGR01326 54 LMNPTTDVLEQRIAALE-GGVAALAVASGQAAITYAILNL--AQAGDNIVSSSYLYGGTYNLFKHTLK----------RL 120 (418)
T ss_pred CCChhHHHHHHHHHHHh-CCCeEEEEccHHHHHHHHHHHH--hCCCCEEEEECCCcHHHHHHHHHHHH----------Hc
Confidence 35566788999999888 4578899999999999999842 34567888888888764322211100 00
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccC
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (474)
| .++..++.+|++++++.+++ ++++|++|.++|++|.+.+ +++|+++|++||+++|+||+|...
T Consensus 121 G------~~v~~v~~~d~~~l~~~l~~---~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~~~--- 184 (418)
T TIGR01326 121 G------IEVRFVDPDDPEEFEKAIDE---NTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFATP--- 184 (418)
T ss_pred C------cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCchh---
Confidence 1 13445556689999998863 5788999998888999888 999999999999999999999521
Q ss_pred CCccccccCCCCcee--ehhhhcCC-CcceEEEEecH
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGRR 329 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~~~ 329 (474)
.....+...+|++ +++|.+++ |+++|++++++
T Consensus 185 --~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 185 --YLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred --hcCCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 1111122345766 79999996 89999997754
No 291
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=7.9e-14 Score=142.41 Aligned_cols=318 Identities=15% Similarity=0.079 Sum_probs=176.5
Q ss_pred CCHHHHHHHHHHHHhcCCCCC-------CC----HHHHHHHHHHHhhCC-CCCeEEEe---CCHHHHHHHHHHHhHhhcC
Q 011959 116 ADDQVLAALGETMKKGTSFGA-------PC----LLENVLAEMVISAVP-SIEMVRFV---NSGTEACMGVLRLARAFTG 180 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~~~-------~~----~~~~~la~~l~~~~~-~~~~v~~~---~sGseA~~~al~~ar~~~~ 180 (474)
.+|.+++++...+.+....+. -. .++....+.+++.+. ..+.+.++ +||++||..+++.. +..
T Consensus 46 ~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al--~~~ 123 (452)
T PTZ00094 46 TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL--LQP 123 (452)
T ss_pred CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh--cCC
Confidence 468888888887754210011 11 122123456667775 34556566 79999999988842 233
Q ss_pred CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC-----CHHHHHHHHhcCCCCeEEEEEccc
Q 011959 181 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 181 ~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
++.||+ +..-||............. ....+ ...++..++++ |+++|+++++++ +.+.|++.
T Consensus 124 gd~Ii~-~~~ehg~~l~~~~~l~~~~-----~~~~~----~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~-- 189 (452)
T PTZ00094 124 HDRIMG-LDLPSGGHLTHGFYTAKKK-----VSATS----IYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAG-- 189 (452)
T ss_pred CCEEEe-cccccCCcccccccccccc-----cccce----eeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEe--
Confidence 455555 4444654332211000000 00000 00012222332 899999999753 23445542
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCcccCCCccccccCCCCceee--hhhhcCCCcceEEEEecHHHH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRRDIM 332 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~r~g~~~~~~~~g~~pdi~t--~sK~l~~G~~iG~~~~~~~i~ 332 (474)
.++.|.+.| +++|.++|+++|++|++|++| .|...+........ ..|+++ ..|+|.|.. .|++++++++.
T Consensus 190 ~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~--~~D~l~~S~hK~l~GP~-Gg~l~~~~~~~ 262 (452)
T PTZ00094 190 ASAYPRDID----YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP--YADVVTTTTHKSLRGPR-SGLIFYRKKVK 262 (452)
T ss_pred CCCCCCccC----HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC--CCcEEEcCCccCCCCCC-ceEEEEecccc
Confidence 345778888 999999999999999999999 44411111111111 357775 569997533 46667676554
Q ss_pred HhhcCC--CCcccccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee-eceeEEE
Q 011959 333 EMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFGF 406 (474)
Q Consensus 333 ~~~~~~--~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~~~~i 406 (474)
+.+... ...+....-+.++..+++..++++.+.. +++.+++.++.++|.+.|.+. ++.....+ ......+
T Consensus 263 ~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~----g~~v~~~~~~~~~~~v 338 (452)
T PTZ00094 263 PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR----GYDLVTGGTDNHLVLV 338 (452)
T ss_pred hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC----CcEEecCCCCCceEee
Confidence 433210 0111111114566777788888988854 356778888888888888663 22111111 0112222
Q ss_pred EEecCCCcCcccccccchHHHHHHHHHHHHCCeEeccc---------CCcceEEe------cCCcHHHHHHHHHHHHHHH
Q 011959 407 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---------QFEAGFTS------LAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---------~~~~~~~~------~~~t~e~i~~~l~~l~~~~ 471 (474)
.+.... .....+...|.++||++... ..+.+|++ ..++++|++++++.|.+++
T Consensus 339 ~~~~~~------------~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~ 406 (452)
T PTZ00094 339 DLRPFG------------ITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAV 406 (452)
T ss_pred cCCcCC------------CCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 332111 11245667776789999522 12346764 2346999999999999987
Q ss_pred h
Q 011959 472 R 472 (474)
Q Consensus 472 ~ 472 (474)
+
T Consensus 407 ~ 407 (452)
T PTZ00094 407 K 407 (452)
T ss_pred H
Confidence 5
No 292
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=2.7e-14 Score=142.33 Aligned_cols=212 Identities=16% Similarity=0.114 Sum_probs=137.6
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++...+|.+.++++. +.+.+++++||+.|+..++.. .+..++.|++..+.|++........... +
T Consensus 51 ~np~~~~lE~~lA~l~-g~~~~l~~~sG~~Ai~~~l~~--ll~~GD~Vlv~~~~y~~~~~~~~~~~~~-----------g 116 (385)
T PRK08574 51 ENPTLRPLEEALAKLE-GGVDALAFNSGMAAISTLFFS--LLKAGDRVVLPMEAYGTTLRLLKSLEKF-----------G 116 (385)
T ss_pred CCccHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHH--HhCCCCEEEEcCCCchhHHHHHHHhhcc-----------C
Confidence 3445567778888777 456788899999999999874 2445678888887776643322111100 1
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCcccC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLA 295 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~r~g 295 (474)
+ ++..+. .|++++++.++.+ ++++|++|.++|++|.+.+ +++|.++|++||++||+||+| +++..
T Consensus 117 ~------~v~~~~-~d~~~l~~~i~~~--~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a~~~~~- 182 (385)
T PRK08574 117 V------KVVLAY-PSTEDIIEAIKEG--RTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFATPLLY- 182 (385)
T ss_pred c------EEEEEC-CCHHHHHHhcCcc--CceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccccC-
Confidence 1 122222 2688899888642 5789999999999999998 999999999999999999999 44311
Q ss_pred CCccccccCCCCcee--ehhhhcCC-Ccce-EEEE-ecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHH
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYG-GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~i-G~~~-~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (474)
.. . ..|. |++ +++|.++| |-.+ |+++ .++++.+.++... .......+|+.++.++..|+.+ +...
T Consensus 183 ~~--l-~~Ga--Divv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~---~~~g~~~~p~~a~l~l~~l~tL--~~R~ 252 (385)
T PRK08574 183 RP--L-RHGA--DFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR---RRLGTIMQPFEAYLVLRGLKTL--EVRF 252 (385)
T ss_pred Ch--h-hhCC--cEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH---HhcCCCCCHHHHHHHHcccCcH--HHHH
Confidence 11 1 1343 554 78999985 5444 5454 4677777665211 1123345677666666666543 3345
Q ss_pred HHHHHHHHHHHHHHHH
Q 011959 371 EYLNKITGELTQGIID 386 (474)
Q Consensus 371 ~~~~~~~~~l~~~L~~ 386 (474)
++..++..++.+.|++
T Consensus 253 ~~~~~na~~la~~L~~ 268 (385)
T PRK08574 253 ERQCRNAMAIAEFLSE 268 (385)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5556666666666654
No 293
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.66 E-value=4.7e-14 Score=140.87 Aligned_cols=309 Identities=16% Similarity=0.107 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchh
Q 011959 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (474)
Q Consensus 118 p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (474)
++-++++.+.+..+..+ ..+...+|.+.+++++ +.+.+++++||++|+..+++.. ....+++||+..++|.+.. .
T Consensus 14 ~~e~~~~~~~l~~~~~~--~g~~~~~le~~la~~~-g~~~~v~~~sgt~al~lal~al-~~~~Gd~Viv~~~~~~~~~-~ 88 (379)
T PRK11658 14 DEELAAVKEVLRSGWIT--TGPKNQALEQAFCQLT-GNQHAIAVSSATAGMHITLMAL-GIGPGDEVITPSLTWVSTL-N 88 (379)
T ss_pred HHHHHHHHHHHHcCCcc--CCHhHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHc-CCCCCCEEEECCCcHHHHH-H
Confidence 56678888888765432 3344677777777777 5568899999999999999842 1345678888888887653 3
Q ss_pred HHHhcCCCCccCCCCCCCCCCCCCCCceEEccC-CCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHH
Q 011959 198 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (474)
Q Consensus 198 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (474)
.+...|..+..++... .+ + -|++++++.+.. ++++|+ |++ ..|...+ +++|.++|
T Consensus 89 ~~~~~G~~~v~vd~~~-~~-------------~~~d~~~l~~~i~~---~tkav~--~~~-~~G~~~d----~~~i~~~a 144 (379)
T PRK11658 89 MIVLLGATPVMVDVDR-DT-------------LMVTPEAIEAAITP---RTKAII--PVH-YAGAPAD----LDAIRAIG 144 (379)
T ss_pred HHHHcCCEEEEEecCC-Cc-------------CCcCHHHHHHhccc---CCeEEE--EeC-CCCCcCC----HHHHHHHH
Confidence 3333443322211110 00 1 178999998863 466666 222 3677666 89999999
Q ss_pred HHhCCEEEEecccc-Cc-ccCCCccccccCCCCceeehh--hhcCCCcceEEEEec-HHHHHhhcCC---CCc-------
Q 011959 277 KENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGR-RDIMEMVAPA---GPM------- 341 (474)
Q Consensus 277 ~~~g~llI~DEv~~-g~-r~g~~~~~~~~g~~pdi~t~s--K~l~~G~~iG~~~~~-~~i~~~~~~~---~~~------- 341 (474)
++||++||+|++|+ |. ..|.. ...+|. ++.+|+ |.+++| +.|+++.+ +++.+.++.. +..
T Consensus 145 ~~~gi~vi~D~a~a~g~~~~~~~--~g~~g~--~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~ 219 (379)
T PRK11658 145 ERYGIPVIEDAAHAVGTYYKGRH--IGARGT--AIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQ 219 (379)
T ss_pred HHcCCeEEEECCCccCCeECCee--cCCCCC--EEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhh
Confidence 99999999999995 54 33321 112333 566766 666543 67777764 6776655421 100
Q ss_pred -----------ccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh-cCCeeE-EeeeceeEEEEE
Q 011959 342 -----------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-AGHAIC-GGYISGMFGFFF 408 (474)
Q Consensus 342 -----------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~-v~~~g~~~~i~~ 408 (474)
..+..+..+.+.++.++..|+.+ ++..++.+++.+++++.|.++... ...+.. ......++.+.+
T Consensus 220 ~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (379)
T PRK11658 220 TQGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRV 297 (379)
T ss_pred cccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEE
Confidence 00112334445555555555543 445666666777777777653110 001000 001112223333
Q ss_pred ecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----------------C--------cceEEe--cCCcHHHHH
Q 011959 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------F--------EAGFTS--LAHSSDDIQ 461 (474)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------~--------~~~~~~--~~~t~e~i~ 461 (474)
.... .....+++.+.|.++||.+.... . ..+.++ ...|+++++
T Consensus 298 ~~~~----------~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~ 367 (379)
T PRK11658 298 DEER----------CGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVD 367 (379)
T ss_pred CCcc----------ccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHH
Confidence 2110 01123578888999998654210 0 012333 456999999
Q ss_pred HHHHHHHHHHh
Q 011959 462 HTITAAEKVLR 472 (474)
Q Consensus 462 ~~l~~l~~~~~ 472 (474)
++++.|++++.
T Consensus 368 ~i~~~i~~~~~ 378 (379)
T PRK11658 368 RVITALQQIAG 378 (379)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 294
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=2.7e-14 Score=142.75 Aligned_cols=237 Identities=16% Similarity=0.130 Sum_probs=149.0
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
+++...+|.++++++. +.+..+.++||++|+..+++.. ...+++||+.++.|.+.......... ..+
T Consensus 59 ~~p~~~~Le~~lA~~~-g~~~~i~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~t~~~~~~~~~----------~~g 125 (388)
T PRK07811 59 GNPTRTALEEQLAALE-GGAYGRAFSSGMAATDCLLRAV--LRPGDHIVIPNDAYGGTFRLIDKVFT----------RWG 125 (388)
T ss_pred CCccHHHHHHHHHHHh-CCCceEEeCCHHHHHHHHHHHH--hCCCCEEEEcCCCchHHHHHHHHhCc----------CCC
Confidence 4455677888888877 4455677788999999999842 34567888888888653322211110 011
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
.++..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|++||++||+||+|.......
T Consensus 126 ------i~~~~~d~~d~e~l~~~i~~---~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~~~~~ 192 (388)
T PRK07811 126 ------VEYTPVDLSDLDAVRAAITP---RTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASPYLQQ 192 (388)
T ss_pred ------eEEEEeCCCCHHHHHHhcCc---CCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 13444555689999988863 5789999988888888877 9999999999999999999995321111
Q ss_pred CccccccCCCCcee--ehhhhcCC-C-cceEEEEec-HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
. .+...|++ +++|.++| | .+.|+++++ +++.+.+.. .........+|..+..++..|+.+ +...+
T Consensus 193 p-----~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~---~~~~~g~~~s~~~a~l~~~~L~tl--~~R~~ 262 (388)
T PRK07811 193 P-----LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAF---LQNGAGAVPGPFDAYLTLRGLKTL--AVRMD 262 (388)
T ss_pred c-----hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHH---HHHhcCCCCCHHHHHHHHhccCcH--HHHHH
Confidence 1 12234655 68999985 3 567888764 666665541 111112234565555444444432 34455
Q ss_pred HHHHHHHHHHHHHHHHhh----hcC-Ce---------eEEeeeceeEEEEEe
Q 011959 372 YLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (474)
+..++...+.+.|++... .+| +. ....+.|.|+.|++.
T Consensus 263 ~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 314 (388)
T PRK07811 263 RHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA 314 (388)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC
Confidence 566677777777764310 011 00 012356889999985
No 295
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=2.8e-14 Score=143.82 Aligned_cols=218 Identities=21% Similarity=0.235 Sum_probs=140.9
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++...+|.+.|+++.+ .+..++++||++|+..+++.. ...+++||+..+.|++... .+... . + ..+
T Consensus 56 ~~pt~~~Le~~lA~l~g-~~~~l~~ssG~~Ai~~al~al--~~~Gd~Vl~~~~~Y~~t~~-~~~~~-l-------~-~~g 122 (425)
T PRK06084 56 MNPTNDVLEQRVAALEG-GVGALAVASGMAAITYAIQTI--AEAGDNIVSVAKLYGGTYN-LLAHT-L-------P-RIG 122 (425)
T ss_pred CCchHHHHHHHHHHHhC-CCceeEehhHHHHHHHHHHHH--hCCCCEEEEeCCCcchHHH-HHHHh-c-------c-cce
Confidence 34555788888888874 567788999999999999842 3346788888888887432 22210 0 0 001
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
..+..++.+|++++++.+++ ++++|++|+++|++|.+.+ +++|.++|++||++||+||+|.....
T Consensus 123 ------i~v~~~d~~d~e~le~ai~~---~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a~~~~-- 187 (425)
T PRK06084 123 ------IETRFAAHDDIAALEALIDE---RTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDNTVATPVL-- 187 (425)
T ss_pred ------eEEEEECCCCHHHHHHHhcc---CCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCccccc--
Confidence 12444566689999999873 5789999999999999998 99999999999999999999952111
Q ss_pred CccccccCCCCcee--ehhhhcCC-CcceEEEEec-HHH--HHh------hcCCCC-----------------------c
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGR-RDI--MEM------VAPAGP-----------------------M 341 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~~-~~i--~~~------~~~~~~-----------------------~ 341 (474)
........|++ +++|.++| |.++|++++. +.+ .+. +....+ .
T Consensus 188 ---~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (425)
T PRK06084 188 ---CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVP 264 (425)
T ss_pred ---CChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHH
Confidence 11122345655 78999995 6888887653 321 010 000000 0
Q ss_pred ccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 011959 342 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 387 (474)
Q Consensus 342 ~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (474)
........+|..++.++..|+.+ +...++..++...+.+.|++.
T Consensus 265 ~~~~g~~l~~~~a~l~lrgl~tl--~~R~~~~~~na~~la~~L~~~ 308 (425)
T PRK06084 265 LRNMGAALSPFNAFLILQGLETL--ALRMERHTENALKVARYLQQH 308 (425)
T ss_pred HHhcCCCCCHHHHHHHHcCcCcH--HHHHHHHHHHHHHHHHHHHhC
Confidence 01112345666666555555433 455666777777777777764
No 296
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=3e-14 Score=141.61 Aligned_cols=237 Identities=15% Similarity=0.129 Sum_probs=150.9
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (474)
+.++...+|.++++++. +.+.+++++||++|+..++... ...++.|++.++.|.+........... .
T Consensus 50 ~~npt~~~Le~~lA~le-g~e~ivvt~gg~~Ai~~~l~al--l~~Gd~Il~~~~~y~~~~~~~~~~~~~----------~ 116 (388)
T PRK08861 50 SGNPNRGLLEQTLSELE-SGKGAVVTNCGTSALNLWVSAL--LGPDDLIVAPHDCYGGTYRLFNTRANK----------G 116 (388)
T ss_pred CCCchHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHH--cCCCCEEEEcCCchHHHHHHHHHHHhc----------C
Confidence 34556678888888887 5689999999999999999842 345677888788876533222111100 0
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cccc
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRL 294 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~ 294 (474)
++ ++..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|+++|+++|+||+|. ++..
T Consensus 117 gi------~v~~vd~~d~e~l~~~i~~---~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~~~~~ 183 (388)
T PRK08861 117 DF------KVQFVDQSDAAALDAALAK---KPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLTPVLQ 183 (388)
T ss_pred Ce------EEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCccccccC
Confidence 11 2333444588999888863 5789999988889999999 8899999999999999999995 3211
Q ss_pred CCCccccccCCCCcee--ehhhhcCC--CcceEEEEec-HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCH
Q 011959 295 AYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (474)
Q Consensus 295 g~~~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (474)
.. .....|++ +++|.++| +...|+++++ +++.+.++. .........+|..+...+..|+.+ .-.
T Consensus 184 -~p-----l~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~---~~~~~G~~~~p~~a~l~~rgl~Tl--~lR 252 (388)
T PRK08861 184 -KP-----LELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAW---WGNCIGATGTPFDSYMTLRGIRTL--GAR 252 (388)
T ss_pred -CC-----cccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHH---HHhccCCCCChHHHHHHHhcCCCH--HHH
Confidence 11 12234665 68899985 3667888774 556555542 111112345677666555444332 233
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hcC-Ce---------eEEeeeceeEEEEEe
Q 011959 370 YEYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (474)
.++..++...+.+.|++.-. .|| +. ....+.|.++.|++.
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA 306 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC
Confidence 45556666666666654310 011 00 012467888899885
No 297
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=1.6e-14 Score=143.38 Aligned_cols=234 Identities=13% Similarity=0.127 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCC
Q 011959 139 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 218 (474)
Q Consensus 139 ~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~ 218 (474)
+...+|.+.++++. +.+.+++++||++|+..++.. .+..+++||+.++.|.+......... ...|
T Consensus 61 pt~~~Le~~iA~le-~~~~~~~~~sG~~Ai~~~l~a--ll~~GD~Vvv~~~~Y~~t~~l~~~~l----------~~~G-- 125 (394)
T PRK09028 61 PTHFAFQAAIVELE-GGAGTALYPSGAAAISNALLS--FLKAGDHLLMVDSCYEPTRDLCDKIL----------KGFG-- 125 (394)
T ss_pred chHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHH--HhCCCCEEEEECCCcHHHHHHHHHhh----------hhcc--
Confidence 34567778888776 446789999999999999874 24567889999888866432211100 0011
Q ss_pred CCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCCC
Q 011959 219 KGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYG 297 (474)
Q Consensus 219 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~ 297 (474)
.++..++.++.+.+++.+. +++++|++|.+.|++|.+.+ +++|.++|++||+++|+|++|. ++
T Consensus 126 ----i~v~~v~~~~~e~l~~~l~---~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~p~----- 189 (394)
T PRK09028 126 ----IETTYYDPMIGEGIRELIR---PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWASPI----- 189 (394)
T ss_pred ----eEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCccccc-----
Confidence 1233444456788888875 36889999999999988877 9999999999999999999994 32
Q ss_pred ccccccCCCCcee--ehhhhcCC--CcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHH
Q 011959 298 GAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 373 (474)
Q Consensus 298 ~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~ 373 (474)
.+.-+....|++ +.+|.++| ..-.|+++.++++.+.+.... ...+ ...+|..+...+..|+.+ .-..++.
T Consensus 190 -~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~-~~~G--~~~~p~~a~l~~rgl~TL--~lR~~~~ 263 (394)
T PRK09028 190 -NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHS-YLMG--QCTSPDDVYLAMRGLRTL--GVRLAQH 263 (394)
T ss_pred -cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHH-HhcC--CCCCHHHHHHHHcccCcH--HHHHHHH
Confidence 111122334655 68999985 366787777887766554210 1111 245666666555544432 3345556
Q ss_pred HHHHHHHHHHHHHHhh----hcC-Ce---------eEEeeeceeEEEEEe
Q 011959 374 NKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 374 ~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (474)
.++...+.+.|++.-. .|| +. ....+.|.|+.|++.
T Consensus 264 ~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 264 EKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred HHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 6666666666664310 011 00 012356889999985
No 298
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.63 E-value=4.2e-14 Score=139.83 Aligned_cols=229 Identities=15% Similarity=0.132 Sum_probs=151.2
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++...+|.++++++. +.+.++.++||++|+..++. .+..+++||+....|.+........... .+
T Consensus 52 ~~p~~~~le~~lA~le-g~~~~v~~~sG~aAi~~~l~---~l~~GD~VI~~~~~yg~~~~~~~~~~~~----------~~ 117 (364)
T PRK07269 52 KNPTRAKLEETLAAIE-SADYALATSSGMSAIVLAFS---VFPVGSKVVAVRDLYGGSFRWFNQQEKE----------GR 117 (364)
T ss_pred CCccHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHH---HhCCCCEEEEecCCcCchHHHHHHHHhc----------Cc
Confidence 4455677888888777 67899999999999999985 3456788998888886643221111000 01
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (474)
+ .+.+. .|++++++.++. ++++|++|.+.|++|.+.+ +++|.++|+++|+++|+||++. ++.
T Consensus 118 ~-------~~~~~-~d~~~l~~~i~~---~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~~~~-- 180 (364)
T PRK07269 118 F-------HFTYA-NTEEELIAAIEE---DTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYSPIY-- 180 (364)
T ss_pred E-------EEEec-CCHHHHHHhcCc---CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccccc--
Confidence 0 01111 278999988863 5789999998888898887 9999999999999999999973 221
Q ss_pred CCccccccCCCCcee--ehhhhcCC-C-cceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHH
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (474)
....+...|++ +++|.++| | .-.|++++ ++++.+.++. .........+|+.++.++..|+.+ +..+
T Consensus 181 ----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~---~~~~~G~~~s~~~a~l~~~~L~tL--~~r~ 251 (364)
T PRK07269 181 ----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY---NLNTTGAVLSPFDSYLLMRGLKTL--SLRM 251 (364)
T ss_pred ----CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHcCCCcH--HHHH
Confidence 12233445766 57899985 3 33566666 4667666652 111112456788877777666543 3445
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCe--eEEeeeceeEEEEEe
Q 011959 371 EYLNKITGELTQGIIDAGKKAGHA--ICGGYISGMFGFFFT 409 (474)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~~~~~--~~v~~~g~~~~i~~~ 409 (474)
++.+++...+.+.|+ .++.+ +..++.|.++.|++.
T Consensus 252 ~~~~~na~~~a~~L~----~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 252 ERSTANAQEVVAFLK----KSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred HHHHHHHHHHHHHHH----hCCCccEEeCCCcCcEEEEEEC
Confidence 555666666666554 34422 233678999999884
No 299
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.63 E-value=3.6e-13 Score=130.69 Aligned_cols=308 Identities=20% Similarity=0.197 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchh
Q 011959 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (474)
Q Consensus 118 p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (474)
.+.++++.+.+..+.... -+...++.+.+++++ +...++.++|||.|++.|++.. ...+++.||+..-+|-.....
T Consensus 15 ~~e~~~v~~vl~sg~i~~--G~~v~~FE~~~ae~~-G~k~ava~~sgT~AL~laL~al-~ig~GDeVI~ps~TfvATan~ 90 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG--GPFVRRFEQAFAEYL-GVKYAVAVSSGTAALHLALLAL-AIGPGDEVIVPSFTFVATANA 90 (374)
T ss_pred hHHHHHHHHHHHcCCeec--ChHHHHHHHHHHHHh-CCCeEEEecChHHHHHHHHHhc-CCCCCCEEEecCCchHHHHHH
Confidence 567778888887754222 222334444444444 8899999999999999999943 356678888877677664333
Q ss_pred HHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHH
Q 011959 198 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 277 (474)
Q Consensus 198 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~ 277 (474)
.+..+..++...-.+....+ |++.+|+.|+. ++++||.-...|. ... ++.|.+||+
T Consensus 91 i~~~Ga~PVFvDid~~T~ni--------------d~~~ie~aIt~---~tKAIipVhl~G~---~~d----m~~i~~la~ 146 (374)
T COG0399 91 VLLVGAKPVFVDIDPDTLNI--------------DPDLIEAAITP---RTKAIIPVHLAGQ---PCD----MDAIMALAK 146 (374)
T ss_pred HHHcCCeEEEEecCCcccCC--------------CHHHHHHHccc---CCeEEEEehhccC---CCC----HHHHHHHHH
Confidence 33333332222111221221 89999999984 4888888776654 344 999999999
Q ss_pred HhCCEEEEecccc-Cc-ccCCCccccccCCCCceeehh----hhcCCCcceEEEEec-HHHHHhhcC---CCCc------
Q 011959 278 ENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVAP---AGPM------ 341 (474)
Q Consensus 278 ~~g~llI~DEv~~-g~-r~g~~~~~~~~g~~pdi~t~s----K~l~~G~~iG~~~~~-~~i~~~~~~---~~~~------ 341 (474)
+||++||.|-+|+ |- +.|+ ..|-.-|+.+|| |-++.| -.|+++.+ +++.+.++. .+..
T Consensus 147 ~~~l~vIEDaAqa~Ga~y~gk-----~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~ 220 (374)
T COG0399 147 RHGLPVIEDAAQAHGATYKGK-----KVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFK 220 (374)
T ss_pred HcCCeEEEEcchhccCeecCc-----ccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCcccc
Confidence 9999999999994 33 3332 223333565554 999876 56777665 456555542 1111
Q ss_pred c----cccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh-hcCCeeE-EeeeceeEEEEEecCCCcC
Q 011959 342 Y----QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK-KAGHAIC-GGYISGMFGFFFTEGPVYN 415 (474)
Q Consensus 342 ~----~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~-v~~~g~~~~i~~~~~~~~~ 415 (474)
+ .+..+..+-+.++.++..|+.+ +++.++-++..+++.+.|.++.. ..+.... ....-.++.+.+...
T Consensus 221 y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~---- 294 (374)
T COG0399 221 YLHEELGYNYRLTEIQAAIGLAQLERL--DEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE---- 294 (374)
T ss_pred ceeeecccccCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC----
Confidence 1 1223344566666677777655 45666666777777777765421 1111110 111111222222211
Q ss_pred cccccccchHHHHHHHHHHHHCCe----EecccCC---------------c--------ceEEe--cCCcHHHHHHHHHH
Q 011959 416 FEDAKKSETTKFARFYRGMLEEGV----YFAPSQF---------------E--------AGFTS--LAHSSDDIQHTITA 466 (474)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~l~~~Gv----~v~~~~~---------------~--------~~~~~--~~~t~e~i~~~l~~ 466 (474)
....+.+.+.|.++|| +..|... + .++++ ...+++++++.+++
T Consensus 295 --------~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~ 366 (374)
T COG0399 295 --------GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEA 366 (374)
T ss_pred --------CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHH
Confidence 1123567888888854 3443210 0 12333 46799999999999
Q ss_pred HHHHHhh
Q 011959 467 AEKVLRQ 473 (474)
Q Consensus 467 l~~~~~~ 473 (474)
|++++..
T Consensus 367 l~~~~~~ 373 (374)
T COG0399 367 LKEVLGS 373 (374)
T ss_pred HHHHhcc
Confidence 9998864
No 300
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.62 E-value=1e-13 Score=138.15 Aligned_cols=211 Identities=13% Similarity=0.137 Sum_probs=135.2
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
.+...+|++++++++ +.+.+++++||+.|+..++. .+..++.||+.+..|.+..........
T Consensus 46 ~p~~~~le~~la~l~-g~~~~l~~~sG~~al~~~l~---ll~~Gd~Vl~~~~~y~~~~~~~~~~~~-------------- 107 (378)
T TIGR01329 46 NPTRTALESLLAKLD-KADRAFAFSSGMAALDVITR---LLNNGDEIIAGDDLYGGTDRLLTQVVP-------------- 107 (378)
T ss_pred ChHHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHH---HhCCCCEEEEcCCCchHHHHHHHHHHH--------------
Confidence 344677888888877 44788888999999887765 345667888877777653221111000
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCC
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAY 296 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~ 296 (474)
..+.++..++..|++++++.++ +++++|++|.+.|++|.+.+ +++|.++|++||+++|+|++|. ++..
T Consensus 108 --~~G~~v~~vd~~d~~~le~~i~---~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~~~~~-- 176 (378)
T TIGR01329 108 --RSGVVVVHVDTTDLDKVKAALG---PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMSPLLC-- 176 (378)
T ss_pred --HcCcEEEEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 0011345555568999999886 36889999999899999998 9999999999999999999983 2211
Q ss_pred CccccccCCCCcee--ehhhhcCC--CcceEEEEec-HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
...+...|++ +++|.++| ++..|+++++ +++.+.+.. .........+|..+..++..++.+ +...+
T Consensus 177 ----~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~---~~~~~G~~~~~~~a~l~~~~l~tl--~~R~e 247 (378)
T TIGR01329 177 ----NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYF---LQNSTGSGLAPFDCWLLLRGIKTL--AIRIE 247 (378)
T ss_pred ----ChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHH---HHHhcCCcCCHHHHHHHHccCCCH--HHHHH
Confidence 1112234655 68899985 3678888774 455555542 111112244566554433333222 34455
Q ss_pred HHHHHHHHHHHHHHH
Q 011959 372 YLNKITGELTQGIID 386 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~ 386 (474)
+..++...+.+.|++
T Consensus 248 ~~~~na~~la~~L~~ 262 (378)
T TIGR01329 248 KQQENARAIAMFLST 262 (378)
T ss_pred HHHHHHHHHHHHHHh
Confidence 566666666666653
No 301
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.62 E-value=3.7e-13 Score=136.18 Aligned_cols=305 Identities=16% Similarity=0.135 Sum_probs=176.6
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhH-------hhcCCcEEEEEeCCCCC
Q 011959 121 LAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR-------AFTGRERIIKFEGCYHG 193 (474)
Q Consensus 121 ~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar-------~~~~~~~ii~~~~~yhg 193 (474)
.+++.+.+..+....+ ....+|.+.+++++ +.+++++++||++|+..+++.+. ....+++||+..++|.+
T Consensus 47 ~~a~~~~~~~~~~~~G--~~~~~fe~~lA~~~-g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a 123 (438)
T PRK15407 47 LQNLVDASLDFWLTTG--RFNDAFEKKLAEFL-GVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPT 123 (438)
T ss_pred HHHHHHHHHhCcccCC--hhHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHH
Confidence 4445555555432222 23456666666666 56789999999999999998542 23456889988888876
Q ss_pred CchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC-CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHH
Q 011959 194 HADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 272 (474)
Q Consensus 194 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l 272 (474)
..... ...|..+...+... -.++ |++++++.+.. ++++|++++..++ ..+ +++|
T Consensus 124 ~~~~v-~~~G~~pv~vdvd~--------------~~~~id~~~le~~i~~---~tkaVi~~~~~G~---p~d----l~~I 178 (438)
T PRK15407 124 TVNPI-IQNGLVPVFVDVEL--------------PTYNIDASLLEAAVSP---KTKAIMIAHTLGN---PFD----LAAV 178 (438)
T ss_pred HHHHH-HHcCCEEEEEecCC--------------CcCCcCHHHHHHHcCc---CCeEEEEeCCCCC---hhh----HHHH
Confidence 54333 33333221111100 0122 78999988863 5788888876443 333 8999
Q ss_pred HHHHHHhCCEEEEecccc-Cc-ccCCCccccccCCCCceeehh----hhcCCCcceEEEEecH-HHHHhhc---CCCCc-
Q 011959 273 RRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGRR-DIMEMVA---PAGPM- 341 (474)
Q Consensus 273 ~~l~~~~g~llI~DEv~~-g~-r~g~~~~~~~~g~~pdi~t~s----K~l~~G~~iG~~~~~~-~i~~~~~---~~~~~- 341 (474)
+++|++||++||+|++|+ |- ..|. ..|-.-|+.+|| |.+..|- .|+++.++ ++.+.++ ..+..
T Consensus 179 ~~la~~~gi~vIeDaa~a~G~~~~g~-----~~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~~~G~~~ 252 (438)
T PRK15407 179 KAFCDKHNLWLIEDNCDALGSTYDGR-----MTGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFRDWGRDC 252 (438)
T ss_pred HHHHHHCCCEEEEECccchhhhcCCe-----eeeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHHHHhCccc
Confidence 999999999999999995 32 2221 122223666554 7676442 57777654 4433322 11100
Q ss_pred --------------------------------ccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh
Q 011959 342 --------------------------------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK 389 (474)
Q Consensus 342 --------------------------------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 389 (474)
..+..+..+.+.++.++..|+.+ ++..++-+++.+++.+.|.++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 253 WCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred ccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCC
Confidence 01233456778888888888766 45666677777777777764311
Q ss_pred hcCCee---EEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--------------Cc-----
Q 011959 390 KAGHAI---CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--------------FE----- 447 (474)
Q Consensus 390 ~~~~~~---~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------------~~----- 447 (474)
....+. .....-.++.+.+.... ....+++.+.|.++||-..... ..
T Consensus 331 ~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~ 399 (438)
T PRK15407 331 FLILPEATPNSDPSWFGFPITVKEDA-----------GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGEL 399 (438)
T ss_pred ccccCcCCCCCeeEEEEEEEEECCcC-----------CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCC
Confidence 010111 11111122333332110 0113578899999998543210 00
Q ss_pred ---------ceEEe--cCCcHHHHHHHHHHHHHHHh
Q 011959 448 ---------AGFTS--LAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 448 ---------~~~~~--~~~t~e~i~~~l~~l~~~~~ 472 (474)
.+.++ ...|+++++.++++|+++++
T Consensus 400 P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 400 TNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred hHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 02333 34689999999999998874
No 302
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=5.6e-14 Score=141.95 Aligned_cols=238 Identities=17% Similarity=0.160 Sum_probs=150.6
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
++...+|.+.++++. +.+..++++||+.|+..+++.. ...+++||+....|++.........
T Consensus 62 ~p~~~~le~~lA~l~-g~~~al~~~SG~~Ai~~al~al--l~pGd~VIv~~~~y~~t~~~~~~~~--------------- 123 (427)
T PRK05994 62 NPTNAVLEERVAALE-GGTAALAVASGHAAQFLVFHTL--LQPGDEFIAARKLYGGSINQFGHAF--------------- 123 (427)
T ss_pred CccHHHHHHHHHHHh-CCCcEEEEcCHHHHHHHHHHHH--hCCCCEEEEecCcchhHHHHHHHHH---------------
Confidence 445678888888888 4556889999999999999852 4456889988888887432211100
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCC
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAY 296 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~ 296 (474)
...+..+..++.+|++++++.++. ++++|++|.++|++|.+.+ +++|.++|++||+++|+|++|. ++
T Consensus 124 -~~~G~~v~~vd~~d~~~l~~ai~~---~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~~~---- 191 (427)
T PRK05994 124 -KSFGWQVRWADADDPASFERAITP---RTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLASPY---- 191 (427)
T ss_pred -HhcCcEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCccccc----
Confidence 001113445555689999998863 6789999999999999998 9999999999999999999995 22
Q ss_pred CccccccCCCCcee--ehhhhcCC-CcceEEEEec-HH-----------------------HHHhhc-------CCCCcc
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGR-RD-----------------------IMEMVA-------PAGPMY 342 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~~-~~-----------------------i~~~~~-------~~~~~~ 342 (474)
....+...+|++ +++|.+++ |-.+|+++.. .. +.+.+. ......
T Consensus 192 --~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (427)
T PRK05994 192 --LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGL 269 (427)
T ss_pred --cCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHH
Confidence 112233456766 58899985 4467766542 21 111100 000000
Q ss_pred cccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hcCCe-e---------E-EeeeceeEEEE
Q 011959 343 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAGHA-I---------C-GGYISGMFGFF 407 (474)
Q Consensus 343 ~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~-~---------~-v~~~g~~~~i~ 407 (474)
.......+|+.++.++..|+.+ +...++..++...+.+.|++.-. .||-. . . ..+.|.++.|+
T Consensus 270 ~~~G~~~~~~~A~l~~~~l~tL--~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~ 347 (427)
T PRK05994 270 RDLGPAISPFNAFLILTGIETL--PLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFG 347 (427)
T ss_pred HhcCCCCCHHHHHHHHcCcccH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEE
Confidence 0111235666666666555433 44566677777777777765321 11100 0 0 24568888988
Q ss_pred Ee
Q 011959 408 FT 409 (474)
Q Consensus 408 ~~ 409 (474)
+.
T Consensus 348 l~ 349 (427)
T PRK05994 348 LK 349 (427)
T ss_pred ec
Confidence 85
No 303
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.62 E-value=2.3e-13 Score=136.70 Aligned_cols=324 Identities=12% Similarity=-0.000 Sum_probs=189.9
Q ss_pred CCHHHHHHHHHHHHhc--C--CCCCCCHHHHHHHHHHHhhCCCC---CeEEE--eCCHHHHHHHHHHHhHhhc-------
Q 011959 116 ADDQVLAALGETMKKG--T--SFGAPCLLENVLAEMVISAVPSI---EMVRF--VNSGTEACMGVLRLARAFT------- 179 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~--~--~~~~~~~~~~~la~~l~~~~~~~---~~v~~--~~sGseA~~~al~~ar~~~------- 179 (474)
.+|++.+++...+... . ..+...+.+++..+++++.++.. +++.+ |+||||||..|+..+|...
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5788999998888642 1 12233478889999999988622 45665 7999999999998776321
Q ss_pred C---CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEcccc
Q 011959 180 G---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (474)
Q Consensus 180 ~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (474)
+ ....|+....-|-....+....|..+..++... .+ ..+ |+++|++.|++ ++.+|++.-.+
T Consensus 133 g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~---------~~v---d~~~L~~~i~~---~t~lV~~t~g~ 196 (431)
T TIGR01788 133 GKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GR---------YVI---DPEQVVEAVDE---NTIGVVCILGT 196 (431)
T ss_pred CCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-Cc---------eee---CHHHHHHHHhh---CCeEEEEEeCC
Confidence 1 123455555556554444443343222211110 11 001 89999999974 56788888888
Q ss_pred CCCCcccCCHHHHHHHHHHHHHh------CCEEEEeccccCc-c---cCC-CccccccCCCCceeehh--hhcCCCcceE
Q 011959 257 GNSGFIAPKPDFLNAIRRITKEN------GALLIFDEVMTGF-R---LAY-GGAQEYFGVTPDLTTLG--KIIGGGLPVG 323 (474)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~------g~llI~DEv~~g~-r---~g~-~~~~~~~g~~pdi~t~s--K~l~~G~~iG 323 (474)
+++|.+.| +++|.++|++| |+++++|-+|.|+ . .+. ...+. ....|.++++ |.+.+...+|
T Consensus 197 t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s~HK~~~~P~g~G 270 (431)
T TIGR01788 197 TYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVSGHKYGLVYPGVG 270 (431)
T ss_pred CCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEECchhccCCCCCcE
Confidence 99999999 99999999999 9999999999875 2 121 11111 1134667654 7654445689
Q ss_pred EEEecHH--HHHhhcCCCCccc----ccCCCCChH--HHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011959 324 AYGGRRD--IMEMVAPAGPMYQ----AGTLSGNPL--AMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG 392 (474)
Q Consensus 324 ~~~~~~~--i~~~~~~~~~~~~----~~t~~~~~~--~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (474)
+++.+++ +.+.+.....+.. ..+..++.. ........|..+.. .+..++..++.+++.++|++. +
T Consensus 271 ~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~----~ 346 (431)
T TIGR01788 271 WVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKL----G 346 (431)
T ss_pred EEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhC----C
Confidence 9877654 3233321100110 012222221 22223344444433 445566667777777777654 2
Q ss_pred -CeeEEe-eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----C---cceEE--ecCCcHHHHH
Q 011959 393 -HAICGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----F---EAGFT--SLAHSSDDIQ 461 (474)
Q Consensus 393 -~~~~v~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~---~~~~~--~~~~t~e~i~ 461 (474)
+....+ ....++.|.+.... .......++.+.|.++|+.+.... . ..+|+ ...++++.++
T Consensus 347 ~~el~~~~~~~~iV~Fr~~~~~---------~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~ 417 (431)
T TIGR01788 347 PFEIISDGSGIPLVAFKLKDDA---------DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAE 417 (431)
T ss_pred CEEEeeCCCCceEEEEEeCCCC---------CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHH
Confidence 111111 23344444443211 001123568889999998642221 1 12333 2356899999
Q ss_pred HHHHHHHHHHhhC
Q 011959 462 HTITAAEKVLRQI 474 (474)
Q Consensus 462 ~~l~~l~~~~~~~ 474 (474)
++++.|++++.++
T Consensus 418 ~~~~~~~~~~~~~ 430 (431)
T TIGR01788 418 LLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988754
No 304
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.61 E-value=3.4e-15 Score=143.99 Aligned_cols=229 Identities=16% Similarity=0.071 Sum_probs=134.3
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCC
Q 011959 136 APCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 214 (474)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 214 (474)
.+.....++.+.+++.++ .++++| ++|+++++..++.. ...++++|++..++ |......+...|..+..+.....
T Consensus 56 ~~~g~i~~~~~~~A~~~g-a~~~~~~~~Gst~a~~~~l~a--l~~~gd~Vlv~~~~-h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 56 DPTGPIKEAQELAARAFG-AKHTFFLVNGTSSSNKAVILA--VCGPGDKILIDRNC-HKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred CCChHHHHHHHHHHHHhC-CCCEEEEcCcHHHHHHHHHHH--cCCCCCEEEEeCCc-hHHHHHHHHHCCCEEEEecCccC
Confidence 355556667777777774 445555 88889999999884 23345566665554 44445555555543322111111
Q ss_pred CCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-c
Q 011959 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R 293 (474)
Q Consensus 215 ~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r 293 (474)
... -..-..|++++++.+++++ ++++|++... +.+|.+.+ +++|.++|++||++||+||+|... .
T Consensus 132 ~~~--------~~~~~i~~~~l~~~l~~~~-~~k~v~l~~p-~~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~~ 197 (294)
T cd00615 132 PYY--------GIAGGIPPETFKKALIEHP-DAKAAVITNP-TYYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHFR 197 (294)
T ss_pred ccc--------CcCCCCCHHHHHHHHHhCC-CceEEEEECC-CCCCEecC----HHHHHHHHHhcCCeEEEECcchhhhc
Confidence 100 0000128999999997643 4555555432 45788888 999999999999999999999643 2
Q ss_pred cCCCccccccCCCCcee--ehhhhcCCCcceEEE-EecHHH--HHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--
Q 011959 294 LAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRRDI--MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-- 366 (474)
Q Consensus 294 ~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~-~~~~~i--~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-- 366 (474)
.+............|++ +++|+++ |++.|++ ..+.+. .+.+.. ......|.+.+.+.+++..++++.+..
T Consensus 198 ~~~~~~~~~~~~~~div~~S~hK~l~-g~~~~~~l~~~~~~~~~~~~~~--~~~~~~ttsps~~~~asl~~a~~~~~~~g 274 (294)
T cd00615 198 FHPILPSSAAMAGADIVVQSTHKTLP-ALTQGSMIHVKGDLVNPDRVNE--ALNLHQSTSPSYLILASLDVARAMMALEG 274 (294)
T ss_pred cCcccCcchhhcCCcEEEEchhcccc-hHhHHHHHHhCCCcCCHHHHHH--HHHHHCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 22111111112234655 6889884 5655554 343331 122221 112233556677777777778776643
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 011959 367 PGTYEYLNKITGELTQGII 385 (474)
Q Consensus 367 ~~~~~~~~~~~~~l~~~L~ 385 (474)
.++.+++.++.+++++.|+
T Consensus 275 ~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 275 KELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4567777777777777764
No 305
>PRK04311 selenocysteine synthase; Provisional
Probab=99.61 E-value=6.7e-13 Score=134.21 Aligned_cols=315 Identities=17% Similarity=0.135 Sum_probs=181.4
Q ss_pred CCHHHHHHHHHHHHhcCCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeC
Q 011959 116 ADDQVLAALGETMKKGTSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 189 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~ 189 (474)
-++++.+++.+.+...... +........+.+.+++++ +.+.++++|||+.|+..++. .+..+++||+.+.
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~-Gae~a~vv~sgtaAl~l~l~---~l~~GdeVIvs~~ 173 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT-GAEDALVVNNNAAAVLLALN---ALAAGKEVIVSRG 173 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHH---HhCCCCEEEEcch
Confidence 3689999999988764311 111233457777787777 56788999999999999886 4567788888765
Q ss_pred CCC--CCch---hHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC---CCHHHHHHHHhcCCCCeEEEEEccccCC--C
Q 011959 190 CYH--GHAD---PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNKGEIAAIILEPVVGN--S 259 (474)
Q Consensus 190 ~yh--g~~~---~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~---~d~~~le~~l~~~~~~~a~vi~ep~~~~--~ 259 (474)
.+. |... ..+...|. .+..++. .+++++++.+.. ++++|+++...|. .
T Consensus 174 e~~~~ggs~~i~~~~~~~G~-------------------~l~~v~~~~~t~~~dle~aI~~---~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 174 ELVEIGGAFRIPDVMRQAGA-------------------RLVEVGTTNRTHLRDYEQAINE---NTALLLKVHTSNYRIE 231 (464)
T ss_pred hhhhcCcchhhHHHHHHCCc-------------------EEEEECCCCCCCHHHHHHhcCc---cCeEEEEEcCCCcccc
Confidence 332 2111 11222222 2222222 268889988863 5777777765543 4
Q ss_pred C--cccCCHHHHHHHHHHHHHhCCEEEEeccccCc-c-cC------CCccccccCCCCceeehh--hhcCCCcceEEEEe
Q 011959 260 G--FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R-LA------YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGG 327 (474)
Q Consensus 260 G--~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r-~g------~~~~~~~~g~~pdi~t~s--K~l~~G~~iG~~~~ 327 (474)
| ...+ +++|.++|++||+++|+|... |. . .+ .....+......|++++| |.++|. ..|++++
T Consensus 232 G~~~~~d----l~eI~~lak~~gi~vivD~gs-G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g 305 (464)
T PRK04311 232 GFTKEVS----LAELAALGKEHGLPVVYDLGS-GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVG 305 (464)
T ss_pred ccCCcCC----HHHHHHHHHHcCCeEEEECCC-cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEE
Confidence 5 3455 999999999999999999953 22 1 11 111122222456888776 999864 3788899
Q ss_pred cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCH------------HHHHHHHHHHHHHHHHHHhhhcCC
Q 011959 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGT------------YEYLNKITGELTQGIIDAGKKAGH 393 (474)
Q Consensus 328 ~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~------------~~~~~~~~~~l~~~L~~~~~~~~~ 393 (474)
++++++.++.. + ..-.+...-...++..++|....+ +.+ .+++.++.+.+.+.|++.... ++
T Consensus 306 ~~~li~~l~~~-~--~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~-~~ 381 (464)
T PRK04311 306 KKELIARLKKH-P--LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGA-AF 381 (464)
T ss_pred cHHHHHHHhhc-h--hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCC-Ce
Confidence 99999877631 1 111222334455555556653322 112 256666777777777654210 11
Q ss_pred eeEEe------eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHC--CeEecccCCcceEE-ecCCcHHHHHHHH
Q 011959 394 AICGG------YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE--GVYFAPSQFEAGFT-SLAHSSDDIQHTI 464 (474)
Q Consensus 394 ~~~v~------~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--Gv~v~~~~~~~~~~-~~~~t~e~i~~~l 464 (474)
...+. |.|.+-...+ ..+.-...+.......+.+.|.+. .|+.+. ....+.+ .-+..++|++.++
T Consensus 382 ~~~~~~~~~~~gggs~p~~~~-----~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~-~~~~~~ld~r~~~~~~~~~~~ 455 (464)
T PRK04311 382 AVEVVPSFSQVGGGSLPVDRL-----PSAAVTLTPKDRSLEALAARLRLLPPPVIGRI-EDGRLLLDLRTLEEEDEERLA 455 (464)
T ss_pred eEEEEEccCccCCCCCcCCCC-----CeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEE-ECCEEEEEeCcCCHHHHHHHH
Confidence 11111 2222211111 000001111112235667776653 466543 2334555 4577899999999
Q ss_pred HHHHHHHh
Q 011959 465 TAAEKVLR 472 (474)
Q Consensus 465 ~~l~~~~~ 472 (474)
++|.+++.
T Consensus 456 ~~~~~~~~ 463 (464)
T PRK04311 456 AALLEALN 463 (464)
T ss_pred HHHHHHhh
Confidence 99998764
No 306
>PLN02509 cystathionine beta-lyase
Probab=99.61 E-value=1.5e-13 Score=138.83 Aligned_cols=208 Identities=13% Similarity=0.165 Sum_probs=140.5
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhH---HHhcCCCCccCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDS 214 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~~~ 214 (474)
++...+|+++++++. +.+.+++++||+.|+..++. ....+++||+.++.|.+..... +...|.
T Consensus 132 npt~~aLE~~lA~le-g~e~ai~~~SG~aAi~~il~---ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~---------- 197 (464)
T PLN02509 132 NPTRDALESLLAKLD-KADRAFCFTSGMAALSAVTH---LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV---------- 197 (464)
T ss_pred CHHHHHHHHHHHHHh-CCCEEEEeCcHHHHHHHHHH---HhCCCCEEEEcCCchhhHHHHHHHHHHHCCe----------
Confidence 466788999998887 56778888999998865554 3556788998888886643211 111121
Q ss_pred CCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Ccc
Q 011959 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFR 293 (474)
Q Consensus 215 ~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r 293 (474)
.+..++.+|++++++.+. +++++|++|.+.|++|.+.+ +++|.++|++||++||+||+|. ++.
T Consensus 198 ---------~v~~vd~~d~e~l~~ai~---~~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a~~~~ 261 (464)
T PLN02509 198 ---------VVKRVNTTNLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIMSPVL 261 (464)
T ss_pred ---------EEEEeCCCCHHHHHHhCC---cCCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcccccc
Confidence 244455668899988885 36789999999999999877 9999999999999999999984 221
Q ss_pred cCCCccccccCCCCcee--ehhhhcCC-C-cceEEEEec-HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCC
Q 011959 294 LAYGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (474)
Q Consensus 294 ~g~~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (474)
+. ..+...|++ +++|.++| | .-.|+++++ +++.+.+.. .........+|..++.++..|+.+ +.
T Consensus 262 -~~-----pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~---~~~~~g~~l~p~~A~l~lr~L~tL--~~ 330 (464)
T PLN02509 262 -SR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF---LQNSEGSGLAPFDCWLCLRGIKTM--AL 330 (464)
T ss_pred -CC-----hhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH---HHHhcCCCcCHHHHHHHHhhhhhH--HH
Confidence 11 122335665 68899985 3 335556554 444443321 001111234777888877777766 34
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011959 369 TYEYLNKITGELTQGIID 386 (474)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~ 386 (474)
.+++..++.+++.+.|++
T Consensus 331 R~~r~~~nA~~la~~L~~ 348 (464)
T PLN02509 331 RIEKQQENARKIAMYLSS 348 (464)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 667777777888777765
No 307
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.61 E-value=5.6e-13 Score=121.67 Aligned_cols=310 Identities=11% Similarity=0.085 Sum_probs=195.7
Q ss_pred ccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEe
Q 011959 111 AIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 188 (474)
Q Consensus 111 ~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~ 188 (474)
+++||.+|++.+-+.+.++. +...|. ...-.++..||+.++|+|+-. .+.++++|+++.
T Consensus 39 ~~lgh~sPe~~qIm~~v~eg-----------------ikyVFkT~n~~tf~isgsGh~g~E~al~N--~lePgd~vLv~~ 99 (385)
T KOG2862|consen 39 PSLGHMSPEFVQIMDEVLEG-----------------IKYVFKTANAQTFVISGSGHSGWEAALVN--LLEPGDNVLVVS 99 (385)
T ss_pred CccccCCHHHHHHHHHHHHH-----------------HHHHhccCCCceEEEecCCcchHHHHHHh--hcCCCCeEEEEE
Confidence 67888888887776665443 111221 234567888999999999985 455778888887
Q ss_pred CCCCCCchhHHH-hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHH
Q 011959 189 GCYHGHADPFLV-KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 267 (474)
Q Consensus 189 ~~yhg~~~~~~~-~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~ 267 (474)
.+-.|....-+. ..|..+.....+....+ .+|.+++.|.+| ++.+|.+...-+.+|++.+-
T Consensus 100 ~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~--------------~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~~-- 161 (385)
T KOG2862|consen 100 TGTWGQRAADCARRYGAEVDVVEADIGQAV--------------PLEEITEKLSQH--KPKAVFVTHGDSSTGVLQDL-- 161 (385)
T ss_pred echHHHHHHHHHHhhCceeeEEecCcccCc--------------cHHHHHHHHHhc--CCceEEEEecCccccccchH--
Confidence 766664433332 23444433322222222 589999999987 67888888888889988772
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCC--c--cc
Q 011959 268 FLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP--M--YQ 343 (474)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~--~--~~ 343 (474)
++.+.++|++|+++|++|-|-+ -.|..|.++.+|++.-...-.|++++.-.++-+..++..++.++..+. . +.
T Consensus 162 -~~~~g~lc~k~~~lllVD~VaS--lggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yF 238 (385)
T KOG2862|consen 162 -LAISGELCHKHEALLLVDTVAS--LGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYF 238 (385)
T ss_pred -HHHHHHHhhcCCeEEEEechhh--cCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEE
Confidence 5567789999999999998885 234567788888865555678999942224447788888888875332 1 00
Q ss_pred ----cc------------CCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeE
Q 011959 344 ----AG------------TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 404 (474)
Q Consensus 344 ----~~------------t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~ 404 (474)
.. .+..+........++|..+-+ ++.+++.++++++++..|++++.+.-...+
T Consensus 239 d~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e-------- 310 (385)
T KOG2862|consen 239 DILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDE-------- 310 (385)
T ss_pred eHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecCh--------
Confidence 00 112233344455577776655 566777788888888888876432211000
Q ss_pred EEEEecCCCcCcccccccchHHHHHHHHHHHHCC-eEeccc----CCcceEE---ecCCcHHHHHHHHHHHHHHHhh
Q 011959 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG-VYFAPS----QFEAGFT---SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~v~~~----~~~~~~~---~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
..........+.|...+..++...+..++ +.+..+ ....+|| ....+.|.|+..++.|..++++
T Consensus 311 -----~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 311 -----ELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred -----hhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 00011111223344444577888888884 444433 2234566 3456889999999999988864
No 308
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.60 E-value=5e-13 Score=137.23 Aligned_cols=320 Identities=18% Similarity=0.199 Sum_probs=180.7
Q ss_pred CCCHHHHHHHHHHHH--hcCCCC------CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhh--c----C
Q 011959 115 HADDQVLAALGETMK--KGTSFG------APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--T----G 180 (474)
Q Consensus 115 ~~~p~v~~a~~~~~~--~~~~~~------~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~--~----~ 180 (474)
|.+|.+++++.+... ..+.|. +..+...++.++++++++-.+..++.++|+.+...++.+++.+ . +
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~ 160 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTK 160 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCC
Confidence 457888888877521 223331 1125567888888888852233455567777776655544432 1 3
Q ss_pred CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCC
Q 011959 181 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 260 (474)
Q Consensus 181 ~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (474)
+++|++.++.| +.+...+...|..+..++.. ..+ ..|+++|++.+.. ++++|++..++ ++|
T Consensus 161 ~~~Vlv~~~~h-p~~~~~~~~~G~~vv~v~~~-~~~-------------~~D~e~L~~~i~~---~t~~V~v~~Pn-~tG 221 (481)
T PRK04366 161 RTEVIVPDSAH-GTNPASAAMAGFKVVEIPSN-EDG-------------LVDLEALKAAVGE---DTAALMLTNPN-TLG 221 (481)
T ss_pred CCEEEEcCCcc-HhHHHHHHHcCCEEEEeecC-CCC-------------CcCHHHHHhhccc---CCeEEEEeCCC-Ccc
Confidence 34777776654 54555555445433322211 001 1178999988863 56676665433 667
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccCCCccccccCCCCceee--hhhhcC-----CCcceEEEEecHHHH
Q 011959 261 FIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTT--LGKIIG-----GGLPVGAYGGRRDIM 332 (474)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pdi~t--~sK~l~-----~G~~iG~~~~~~~i~ 332 (474)
.+ ..+ +++|.++|+++|+++|+|+++. +. .+.. ....+| .|+++ ..|.|+ ||.-+|++.+++++.
T Consensus 222 ~~--~~d-l~eI~~~a~~~gal~iVD~a~~~~~-~g~~-~~~~~G--aD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~ 294 (481)
T PRK04366 222 LF--ERN-ILEIAEIVHEAGGLLYYDGANLNAI-LGKA-RPGDMG--FDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELA 294 (481)
T ss_pred cc--chH-HHHHHHHHHHcCCEEEEEecChhhh-cccC-CccccC--CCEEEEechhhcCCCCCCCCCCeeeeeehhhhH
Confidence 55 122 9999999999999999999983 21 1111 112234 47764 459887 234578888888887
Q ss_pred HhhcCC-----CCcc-----------cccCCCCChHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHhhhcCC
Q 011959 333 EMVAPA-----GPMY-----------QAGTLSGNPLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGH 393 (474)
Q Consensus 333 ~~~~~~-----~~~~-----------~~~t~~~~~~~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~ 393 (474)
+.+... +..+ ..-.++++.+.+.++...+..+-.+++ .++..++.++++++|.++ +.+
T Consensus 295 ~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~---~~~ 371 (481)
T PRK04366 295 PFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI---YDL 371 (481)
T ss_pred hhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh---Ccc
Confidence 766310 0000 011122344455555555555443433 355667788999999876 222
Q ss_pred eeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----CcceEEe--cCCcHHHHHHHHHH
Q 011959 394 AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTS--LAHSSDDIQHTITA 466 (474)
Q Consensus 394 ~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~~~--~~~t~e~i~~~l~~ 466 (474)
.. .+ ..+-.+.+.... + . .......++.+.|.++|+.+.... ...++++ ..+|++|||++++.
T Consensus 372 ~~--~~-~~~~~~~~~~~~---~---~-~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~ 441 (481)
T PRK04366 372 PY--DR-PCMHEFVLSGKK---L---K-ETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAA 441 (481)
T ss_pred cC--CC-CeeEEEEEECcc---c---c-ccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHH
Confidence 21 11 111111111100 0 0 001123678999999999876322 2234554 46799999999999
Q ss_pred HHHHHhh
Q 011959 467 AEKVLRQ 473 (474)
Q Consensus 467 l~~~~~~ 473 (474)
|+++.++
T Consensus 442 l~~i~~~ 448 (481)
T PRK04366 442 MKQIAEE 448 (481)
T ss_pred HHHHHHH
Confidence 9988764
No 309
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.60 E-value=4.2e-13 Score=134.29 Aligned_cols=298 Identities=11% Similarity=0.021 Sum_probs=176.5
Q ss_pred CHHHHHHHHHHHhhCCC--CCeEEEeCCHH-HHHHHHHHHhHhhc-CCcEEEEEeCCCCCCchhHHHhcCCCCccCCC-C
Q 011959 138 CLLENVLAEMVISAVPS--IEMVRFVNSGT-EACMGVLRLARAFT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-P 212 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~--~~~v~~~~sGs-eA~~~al~~ar~~~-~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~ 212 (474)
..+..++.+.+.++++- .+.++++++|| .++.+++..++... +.+.||+.... |-....++...|..+..++. .
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~t-h~S~~kAi~~~G~~pv~Vd~~~ 182 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRID-QKSCIKAISTAGFEPRVIETVL 182 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcC-hHHHHHHHHHcCCeEEEeeeee
Confidence 45566777777777742 24799999999 68888888665432 34566666555 66667777776764332221 0
Q ss_pred CCCCCCCCCCCceEEccCC-CHHHHHHHHhcCC-CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011959 213 DSPGVPKGATYETLTAPFN-DVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (474)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~-d~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (474)
.... ++ |+++|++.|+... +.+.+|+..|..+..|...+ +++|.++|++||++||+|++|.
T Consensus 183 d~~~-------------~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaAyg 245 (444)
T TIGR03531 183 DGDE-------------LTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNAYG 245 (444)
T ss_pred cCcC-------------CCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECcCc
Confidence 0000 11 8999999998543 45566666665444445555 9999999999999999999996
Q ss_pred Cc--ccCCCccccccCC-CCcee--ehhhhcCC-CcceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHH
Q 011959 291 GF--RLAYGGAQEYFGV-TPDLT--TLGKIIGG-GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 363 (474)
Q Consensus 291 g~--r~g~~~~~~~~g~-~pdi~--t~sK~l~~-G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~ 363 (474)
.. ..... ....... ..|++ .++|.+.. |+ .|.++. ++++++.+.. .+.+ .. .+...+.+....+..
T Consensus 246 ~~~~~~~~~-~~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~---~y~g-~~-~~s~~~~~~~~ll~~ 318 (444)
T TIGR03531 246 LQSNKYMEL-INKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISK---SYPG-RA-SASPSLDVLITLLSL 318 (444)
T ss_pred CcChhhhhh-hhccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHH---hccC-CC-CChHHHHHHHHHHHh
Confidence 32 11100 0011111 23655 46799883 44 444446 6778887763 2222 21 223455555555544
Q ss_pred hcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCe-eEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeE
Q 011959 364 LKE--PGTYEYLNKITGELTQGIIDAGKKAGHA-ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 440 (474)
Q Consensus 364 ~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 440 (474)
-.+ .+++++..++.+++.+.|+++..+++.. .+++...--+++.+..-. ......+...|..++|-
T Consensus 319 G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-----------~~~~~~~g~~l~~~~v~ 387 (444)
T TIGR03531 319 GSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-----------GKDPTMLGSMLYSRRVT 387 (444)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-----------ccCHHHHHHHHHhCCCC
Confidence 333 6778888888999999999987777632 222222223333332110 11124566666676551
Q ss_pred ----ecccC-----------Ccc-------eEE----ecCCcHHHHHHHHHHHHHHH
Q 011959 441 ----FAPSQ-----------FEA-------GFT----SLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 441 ----v~~~~-----------~~~-------~~~----~~~~t~e~i~~~l~~l~~~~ 471 (474)
+.++. ++. -++ .+.++++|||.++++|++++
T Consensus 388 g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 388 GPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred CceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 22221 000 022 36779999999999999864
No 310
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=2.9e-13 Score=136.59 Aligned_cols=159 Identities=18% Similarity=0.177 Sum_probs=114.5
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++....|.+.++++. +.+..++++||+.|+..++.. ....+++|++.++.|++..........
T Consensus 62 ~~p~~~~Le~~lA~le-g~~~al~~~sG~~Ai~~al~~--ll~~GD~Vlv~~~~y~~t~~~~~~~~~------------- 125 (431)
T PRK08248 62 MNPTTDVFEKRIAALE-GGIGALAVSSGQAAITYSILN--IASAGDEIVSSSSLYGGTYNLFAHTLP------------- 125 (431)
T ss_pred CCchHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHH--HhCCCCEEEEccCchhhHHHHHHHHHH-------------
Confidence 4555678888888887 467889999999999999974 245567888888877764432211100
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (474)
..+.++..++..|++++++.++. ++++|+++.+.|++|.+.+ +++|.++|++||+++|+|+++. ++.
T Consensus 126 ---~~Gv~v~~vd~~d~e~l~~ai~~---~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a~~~~-- 193 (431)
T PRK08248 126 ---KLGITVKFVDPSDPENFEAAITD---KTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFASPYL-- 193 (431)
T ss_pred ---hCCEEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCCcccc--
Confidence 01123555566689999998863 5788899888888999998 8999999999999999999984 221
Q ss_pred CCccccccCCCCcee--ehhhhcCC-CcceEEEEe
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG 327 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~ 327 (474)
........|++ +++|.+++ |.++|+++.
T Consensus 194 ----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 194 ----LRPIEHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred ----CChhHcCCCEEEEcCccccCCCCCceEEEEE
Confidence 11112234655 68899995 788888765
No 311
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.60 E-value=7.4e-13 Score=132.64 Aligned_cols=309 Identities=17% Similarity=0.111 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchh
Q 011959 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (474)
Q Consensus 118 p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (474)
++-++++.+.+..+... ......+|.+.+++++ +.++.++++||++|+..+++.. ....+++||+..++|++.. .
T Consensus 10 ~~~~~~v~~~~~~~~~~--~g~~~~~le~~la~~~-g~~~~v~~~sgt~al~~~l~al-~~~~Gd~Viv~~~~~~~~~-~ 84 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFLT--QGPTVPAFEEALAEYV-GAKYAVAFNSATSALHIACLAL-GVGPGDRVWTTPITFVATA-N 84 (380)
T ss_pred HHHHHHHHHHHhcCCcc--CChhHHHHHHHHHHHH-CCCeEEEEcCHHHHHHHHHHHc-CCCCCCEEEeCCcchHHHH-H
Confidence 45577888887765322 2334566777777777 4566777889999999999842 1345678888888876643 3
Q ss_pred HHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC-CCeEEEEEccccCCCCcccCCHHHHHHHHHHH
Q 011959 198 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (474)
Q Consensus 198 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (474)
.+...|..+...+.....+ ..|++++++.+++++ +++++|++.. ..|...+ +++|.++|
T Consensus 85 ~~~~~G~~~~~~~~~~~~~-------------~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~~~i~~l~ 144 (380)
T TIGR03588 85 CALYCGAKVDFVDIDPDTG-------------NIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----MQAIAALA 144 (380)
T ss_pred HHHHcCCEEEEEecCCCcC-------------CcCHHHHHHHhhcccCCCceEEEEeC---CCCccCC----HHHHHHHH
Confidence 3333343322211100000 127899999987421 2456666432 3576666 99999999
Q ss_pred HHhCCEEEEecccc-Cc-ccCCCccccccCC--CCceeehh----hhcCCCcceEEEEe-cHHHHHhhcCC---CC----
Q 011959 277 KENGALLIFDEVMT-GF-RLAYGGAQEYFGV--TPDLTTLG----KIIGGGLPVGAYGG-RRDIMEMVAPA---GP---- 340 (474)
Q Consensus 277 ~~~g~llI~DEv~~-g~-r~g~~~~~~~~g~--~pdi~t~s----K~l~~G~~iG~~~~-~~~i~~~~~~~---~~---- 340 (474)
++||++||+|++|+ |. ..+ ...|. .-|+.++| |.++.| ..|+++. ++++.+.++.. +.
T Consensus 145 ~~~~~~lI~D~a~a~g~~~~~-----~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~ 218 (380)
T TIGR03588 145 KKHGLKIIEDASHALGAEYGG-----KPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDP 218 (380)
T ss_pred HHcCCEEEEECCCcccCccCC-----EeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCc
Confidence 99999999999996 22 111 12233 33776544 888754 4565654 46666654310 00
Q ss_pred -----------cc----cccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEE---eeece
Q 011959 341 -----------MY----QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG---GYISG 402 (474)
Q Consensus 341 -----------~~----~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v---~~~g~ 402 (474)
.+ .+..+..+.+.++.+++.|+.+ +...++.+++.+++.+.|..+. ........ ...-.
T Consensus 219 ~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~ 295 (380)
T TIGR03588 219 LLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDLP-YFTPLTIPLGSKSAWH 295 (380)
T ss_pred ccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCEeEEE
Confidence 00 0112334556666666666654 4566667777777877776542 11101000 01112
Q ss_pred eEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC-------------------------cceEEe--cCC
Q 011959 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------------------------EAGFTS--LAH 455 (474)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-------------------------~~~~~~--~~~ 455 (474)
++.+.+.... ....+.+.+.|.++||.+..... ..+.++ ...
T Consensus 296 ~~~i~~~~~~-----------~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l 364 (380)
T TIGR03588 296 LYPILLDQEF-----------GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPAL 364 (380)
T ss_pred EEEEEECCcC-----------CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCC
Confidence 2223332100 01236788888999987653210 012333 345
Q ss_pred cHHHHHHHHHHHHHHH
Q 011959 456 SSDDIQHTITAAEKVL 471 (474)
Q Consensus 456 t~e~i~~~l~~l~~~~ 471 (474)
|++|++.+++.|++++
T Consensus 365 ~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 365 TLEQQQRVVETLRKVL 380 (380)
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999998864
No 312
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.58 E-value=3.7e-13 Score=133.43 Aligned_cols=239 Identities=14% Similarity=0.064 Sum_probs=147.6
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++....|+++++.... .+..++++||++|+..++.. ....+++||+.++.|.++......... ..|
T Consensus 62 gnPt~~~Le~~la~le~-~~~~v~~sSG~aAi~~~l~a--ll~~GD~Vlv~~~~Y~~~~~l~~~~l~----------~~G 128 (395)
T PRK05967 62 GTPTTDALCKAIDALEG-SAGTILVPSGLAAVTVPFLG--FLSPGDHALIVDSVYYPTRHFCDTMLK----------RLG 128 (395)
T ss_pred CChHHHHHHHHHHHHhC-CCCEEEECcHHHHHHHHHHH--hcCCCCEEEEccCCcHHHHHHHHHHHH----------hcC
Confidence 46667788888887764 34556777799999999874 345678899999888875432211100 001
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
.++..++.++.+.+++.++. ++++|++|.+.|+.+.+.+ +++|.++|+++|+++|+|+++... .
T Consensus 129 ------i~v~~vd~~~~e~l~~al~~---~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t~a~p---~ 192 (395)
T PRK05967 129 ------VEVEYYDPEIGAGIAKLMRP---NTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNTWATP---L 192 (395)
T ss_pred ------eEEEEeCCCCHHHHHHhcCc---CceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECCccCc---e
Confidence 12333444466788888863 5889999988888877777 999999999999999999999532 0
Q ss_pred CccccccCCCCceeehhhhcCC--CcceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHH
Q 011959 297 GGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 374 (474)
Q Consensus 297 ~~~~~~~g~~pdi~t~sK~l~~--G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 374 (474)
..-.-.+|.+.-+.+++|.++| ..-.|++++++++.+.+... ....+ ...+|..+...+..|+.+ .-..++..
T Consensus 193 ~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~--~~~~G-~~~~p~da~l~~rgl~Tl--~lR~~~~~ 267 (395)
T PRK05967 193 YFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEA--HGTLG-LCAGPDDTYQILRGLRTM--GIRLEHHR 267 (395)
T ss_pred ecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHH--HHHcC-CCCCHHHHHHHHcCcccH--HHHHHHHH
Confidence 1111123443333479999985 36788778888766655411 11112 235666655544444332 22344555
Q ss_pred HHHHHHHHHHHHHhh----hcC-Ce---------eEEeeeceeEEEEEe
Q 011959 375 KITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 375 ~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (474)
++...+.+.|++.-. .|| +. ....+.|.++.|++.
T Consensus 268 ~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK05967 268 KSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLA 316 (395)
T ss_pred HHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 566666666654310 011 00 012356888999985
No 313
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.58 E-value=5.7e-13 Score=132.42 Aligned_cols=304 Identities=18% Similarity=0.190 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchh
Q 011959 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (474)
Q Consensus 118 p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (474)
.+.++++.+.++.+. ++.......++.+.+++++ +.+.++.++||+.|++.|++.. ...++++||+..-+|.+.. .
T Consensus 5 ~e~~~~v~~~l~s~~-~~~~g~~~~~fE~~~a~~~-g~~~~~~~~sgt~Al~~al~~l-~~~~gdeVi~p~~t~~~~~-~ 80 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGW-LSTYGPYVEEFEKEFAEYF-GVKYAVAVSSGTSALHLALRAL-GLGPGDEVIVPAYTFPATA-S 80 (363)
T ss_dssp HHHHHHHHHHHHHTC-CSSSSHHHHHHHHHHHHHH-TSSEEEEESSHHHHHHHHHHHT-TGGTTSEEEEESSS-THHH-H
T ss_pred HHHHHHHHHHHHhCC-ccCCCHHHHHHHHHHHHHh-CCCeEEEeCChhHHHHHHHHhc-CCCcCceEecCCCcchHHH-H
Confidence 456777888887763 2222455666777777766 6889999999999999999953 4456788998876776643 3
Q ss_pred HHHhcCCCCccCCC-CCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHH
Q 011959 198 FLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (474)
Q Consensus 198 ~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (474)
++...|..+.-.+. |....+ |++++++.++. ++++|++-...|. ..+ +++|.++|
T Consensus 81 ai~~~G~~pv~~Di~~~~~~i--------------d~~~~~~~i~~---~t~ai~~~h~~G~---~~d----~~~i~~~~ 136 (363)
T PF01041_consen 81 AILWAGAEPVFVDIDPETLNI--------------DPEALEKAITP---KTKAILVVHLFGN---PAD----MDAIRAIA 136 (363)
T ss_dssp HHHHTT-EEEEE-BETTTSSB---------------HHHHHHHHHT---TEEEEEEE-GGGB----------HHHHHHHH
T ss_pred HHHHhccEEEEEeccCCcCCc--------------CHHHHHHHhcc---CccEEEEecCCCC---ccc----HHHHHHHH
Confidence 33334432221111 111111 89999999984 5788888777654 334 99999999
Q ss_pred HHhCCEEEEecccc-Cc-ccCCCccccccCCCCceeehh----hhcCCCcceEEEEec-HHHHHhhc---CCCC------
Q 011959 277 KENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVA---PAGP------ 340 (474)
Q Consensus 277 ~~~g~llI~DEv~~-g~-r~g~~~~~~~~g~~pdi~t~s----K~l~~G~~iG~~~~~-~~i~~~~~---~~~~------ 340 (474)
++||++||.|-+|+ |- ..| ...|-.-|+.+|| |.++.| -.|+++.+ +++.+.++ ..+.
T Consensus 137 ~~~~i~lIeD~a~a~g~~~~g-----~~~G~~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~ 210 (363)
T PF01041_consen 137 RKHGIPLIEDAAQAFGARYKG-----RPVGSFGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRDAFR 210 (363)
T ss_dssp HHTT-EEEEE-TTTTT-EETT-----EETTSSSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETSECS
T ss_pred HHcCCcEEEccccccCceeCC-----EeccCCCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCccccc
Confidence 99999999999995 22 222 2223334776654 988744 25777665 45554443 2110
Q ss_pred cc-----cccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh--cCCeeEEe-eeceeEEEEEecCC
Q 011959 341 MY-----QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK--AGHAICGG-YISGMFGFFFTEGP 412 (474)
Q Consensus 341 ~~-----~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~~~~v~-~~g~~~~i~~~~~~ 412 (474)
.+ .+..+..+.+.++.+++.|+.+ +...++-+++.+++++.|.....- .+...... .....+.+.+.+..
T Consensus 211 ~~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~ 288 (363)
T PF01041_consen 211 RYRHELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEA 288 (363)
T ss_dssp TTEESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCG
T ss_pred cccccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccc
Confidence 01 1234566788888888888755 345555566666666666554210 00000000 11222333332210
Q ss_pred CcCcccccccchHHHHHHHHHHHHCCeEecccCC-c-----c----------------------eEEe--cCCcHHHHHH
Q 011959 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-E-----A----------------------GFTS--LAHSSDDIQH 462 (474)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~-----~----------------------~~~~--~~~t~e~i~~ 462 (474)
. ...+.+.+.|.++||-+.+... + . +.++ ...+++++++
T Consensus 289 ~-----------~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~ 357 (363)
T PF01041_consen 289 L-----------ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDY 357 (363)
T ss_dssp C-----------STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHH
T ss_pred c-----------chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHH
Confidence 0 1136789999999998766431 0 0 1333 4669999999
Q ss_pred HHHHHH
Q 011959 463 TITAAE 468 (474)
Q Consensus 463 ~l~~l~ 468 (474)
++++|+
T Consensus 358 I~~~ir 363 (363)
T PF01041_consen 358 IAEAIR 363 (363)
T ss_dssp HHHHHH
T ss_pred HhhccC
Confidence 998874
No 314
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.57 E-value=2.9e-12 Score=129.24 Aligned_cols=310 Identities=14% Similarity=0.126 Sum_probs=175.8
Q ss_pred CCHHHHHHHHHHHHhcCC--C----CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeC
Q 011959 116 ADDQVLAALGETMKKGTS--F----GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 189 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~--~----~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~ 189 (474)
-++++++++.+.+..... + +........+.+.+++++ +.+..++++||+.|+..++. .+..+++||+.++
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~-gae~alvv~sg~aAi~l~l~---~l~~GdeVIvs~~ 168 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT-GAEDALVVNNNAAAVLLALN---TLAKGKEVIVSRG 168 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHH---HhCCcCEEEECCC
Confidence 479999999998876321 1 112234467778888877 55667889999999998886 4667788888766
Q ss_pred CC---CCCch--hHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC---CCHHHHHHHHhcCCCCeEEEEEccccCC--C
Q 011959 190 CY---HGHAD--PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNKGEIAAIILEPVVGN--S 259 (474)
Q Consensus 190 ~y---hg~~~--~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~---~d~~~le~~l~~~~~~~a~vi~ep~~~~--~ 259 (474)
.+ .|... ..+...|. .+..++. .|++++++.+.. ++++|+++...|. .
T Consensus 169 e~v~~ggs~~i~~~~~~~G~-------------------~~~~v~~~~~~~l~dle~aI~~---~T~lv~~~h~sN~~~~ 226 (454)
T TIGR00474 169 ELVEIGGSFRIPDVMEQSGA-------------------KLVEVGTTNRTHLKDYEDAITE---NTALLLKVHTSNYRIV 226 (454)
T ss_pred hhhhhcchhhHHHHHHHcCC-------------------EEEEeCCCCCCCHHHHHHhcCc---CCEEEEEEccCccccc
Confidence 53 22211 11122222 2333333 368889888863 5777777665443 4
Q ss_pred C--cccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc-C------CCccccccCCCCceeehh--hhcCCCcceEEEEe
Q 011959 260 G--FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-A------YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGG 327 (474)
Q Consensus 260 G--~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~-g------~~~~~~~~g~~pdi~t~s--K~l~~G~~iG~~~~ 327 (474)
| .+.+ +++|.++|++||+++|+|... |. .. + .+..++......|++++| |.++|. ..|++++
T Consensus 227 G~~~~~d----l~~I~~la~~~g~~vivD~~s-G~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp-~~G~i~g 300 (454)
T TIGR00474 227 GFTEEVS----IAELVALGREHGLPVMEDLGS-GSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP-QAGIIVG 300 (454)
T ss_pred CCCCCCC----HHHHHHHHHHcCCeEEEECCC-cccccchhccCCCCcccccHhHcCCCEEEecCccccCCC-eEEEEEE
Confidence 5 3667 999999999999999999642 22 11 1 111112223356899888 999764 3788899
Q ss_pred cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--CCH------------HHHHHHHHHHHHHHHHHHhhhcCC
Q 011959 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGT------------YEYLNKITGELTQGIIDAGKKAGH 393 (474)
Q Consensus 328 ~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~------------~~~~~~~~~~l~~~L~~~~~~~~~ 393 (474)
++++++.+... + ..-.+...-+..++..+++....+ +.+ .+++.++...+.+.|++... .++
T Consensus 301 ~~~~i~~l~~~-~--l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~-~~~ 376 (454)
T TIGR00474 301 KKELIERLKKN-P--LTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALG-PGF 376 (454)
T ss_pred CHHHHHhhhhc-h--hHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhcc-CCc
Confidence 99988876531 1 111122233444444555544322 111 23566677777777776421 111
Q ss_pred eeEE------eeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCC--eEecccCCcceEE-ecCCcHHHHHHHH
Q 011959 394 AICG------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG--VYFAPSQFEAGFT-SLAHSSDDIQHTI 464 (474)
Q Consensus 394 ~~~v------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~v~~~~~~~~~~-~~~~t~e~i~~~l 464 (474)
...+ -|.|.|-.-.+ ..+.-...+.......+.+.|.+.. |+.+. ....+.+ .-+..++|++.++
T Consensus 377 ~~~~~~~~~~~ggg~~p~~~l-----~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~-~~~~~~ld~r~~~~~~~~~~~ 450 (454)
T TIGR00474 377 ELEIVPGLSQVGGGSLPDERL-----PSYAVTLTPDGLSAEKLEARLRELPPPIIGRI-EDDRFLLDLRTLLEDEEELLI 450 (454)
T ss_pred eEEEEEcCCcccCCCCcCCCC-----CeEEEEEecCCCCHHHHHHHHhcCCCCEEEEE-ECCEEEEEeCcCCHHHHHHHH
Confidence 1111 12232221111 0011111111222356777766543 55542 2334555 4566888888888
Q ss_pred HHH
Q 011959 465 TAA 467 (474)
Q Consensus 465 ~~l 467 (474)
++|
T Consensus 451 ~~~ 453 (454)
T TIGR00474 451 EAL 453 (454)
T ss_pred HHh
Confidence 775
No 315
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.57 E-value=4.3e-13 Score=134.19 Aligned_cols=234 Identities=10% Similarity=0.049 Sum_probs=144.1
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
++...+|.+.++++.+ .+..++++||+.|+..++. .+..+++||+.++.|++..........
T Consensus 53 ~p~~~~le~~lA~l~g-~~~~v~~~sG~~ai~~~l~---~l~~Gd~Vlv~~~~y~~~~~~~~~~~~-------------- 114 (390)
T PRK08064 53 NPTREALEDIIAELEG-GTKGFAFASGMAAISTAFL---LLSKGDHVLISEDVYGGTYRMITEVLS-------------- 114 (390)
T ss_pred ChhHHHHHHHHHHHhC-CCCeEEECCHHHHHHHHHH---HhCCCCEEEEccCccchHHHHHHHHHH--------------
Confidence 4555677788887774 3456777889999988885 445678899988888775432221100
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCC
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 297 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~ 297 (474)
..+.++..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|+++|+++|+||+|..+.....
T Consensus 115 --~~G~~v~~v~~~d~~~l~~~l~~---~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~~~~ 185 (390)
T PRK08064 115 --RFGIEHTFVDMTNLEEVAQNIKP---NTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTPLLQKP 185 (390)
T ss_pred --HcCCEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCcccccCc
Confidence 00113455556688999888863 5789999999899999988 99999999999999999999953311111
Q ss_pred ccccccCCCCcee--ehhhhcCC--CcceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC-CCHHH
Q 011959 298 GAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYE 371 (474)
Q Consensus 298 ~~~~~~g~~pdi~--t~sK~l~~--G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~ 371 (474)
. .+| .|++ +++|.++| |.-.|++++ ++++++.++. .........+|..+...+ +-++. ....+
T Consensus 186 --~-~~g--~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~---~~~~~g~~~~~~~a~l~~---~gl~tl~~R~~ 254 (390)
T PRK08064 186 --L-DLG--ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYF---LQNSFGAVLGVQDCWLVL---RGLKTLHVRLE 254 (390)
T ss_pred --h-hhC--CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHH---HHHhcCCCCCHHHHHHHH---cccCcHHHHHH
Confidence 1 123 4655 68899974 344576655 4677777752 212112233444444322 22222 23445
Q ss_pred HHHHHHHHHHHHHHHHhh--h--cCC----e------eEEeeeceeEEEEEe
Q 011959 372 YLNKITGELTQGIIDAGK--K--AGH----A------ICGGYISGMFGFFFT 409 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~--~--~~~----~------~~v~~~g~~~~i~~~ 409 (474)
+..++...+.+.|++... + ++. + ....+.|.++.|++.
T Consensus 255 ~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (390)
T PRK08064 255 HSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ 306 (390)
T ss_pred HHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC
Confidence 555566666666654310 0 110 0 023467888888884
No 316
>PRK05939 hypothetical protein; Provisional
Probab=99.57 E-value=1.1e-12 Score=131.10 Aligned_cols=159 Identities=17% Similarity=0.192 Sum_probs=111.8
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
-++...+|.+.++++. +.+..+.++||+.|+..++.. ....+++||+.+..|.+..........
T Consensus 45 g~p~~~~lE~~la~le-g~~~~v~~ssG~~Ai~~~l~a--ll~~Gd~Vv~~~~~y~~t~~~~~~l~~------------- 108 (397)
T PRK05939 45 GTPTTAALEAKITKME-GGVGTVCFATGMAAIAAVFLT--LLRAGDHLVSSQFLFGNTNSLFGTLRG------------- 108 (397)
T ss_pred CCHHHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHHH--HcCCCCEEEECCCccccHHHHHHHHHh-------------
Confidence 3455678888888887 455677788899999999874 234567788877666553221111100
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (474)
.+.++..++..|++++++.++ +++++|++|.++|++|.+.+ +++|.++|++||+++|+|++|. +..
T Consensus 109 ----~G~~v~~v~~~d~e~l~~~l~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a~~~~-- 175 (397)
T PRK05939 109 ----LGVEVTMVDATDVQNVAAAIR---PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMTSPWL-- 175 (397)
T ss_pred ----cCCEEEEECCCCHHHHHHhCC---CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCcccccc--
Confidence 011345555668999999886 36889999999999999877 9999999999999999999984 321
Q ss_pred CCccccccCCCCcee--ehhhhcCC-CcceEEEEec
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGR 328 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~~ 328 (474)
+....+| .|++ +++|.++| |..+|+++..
T Consensus 176 --~~~~~~g--aDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 176 --FRPKDVG--ASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred --cCccccC--CEEEEecCeecccCCCCeEEEEEec
Confidence 1111123 4554 79999996 8899998664
No 317
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=5.2e-13 Score=133.83 Aligned_cols=255 Identities=14% Similarity=0.062 Sum_probs=157.0
Q ss_pred CHHHHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCc
Q 011959 117 DDQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA 195 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~ 195 (474)
+.+-.+++.+....+..|+ ..++...+|.+.++++. +.+.++.++||+.|+.+++... ...++.||+....|.+..
T Consensus 38 ~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~le-g~~~av~~~SG~aAi~~al~al--l~~GD~VI~~~~~Y~~T~ 114 (432)
T PRK06702 38 TSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELE-GGVGAVATASGQAAIMLAVLNI--CSSGDHLLCSSTVYGGTF 114 (432)
T ss_pred CHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHh--cCCCCEEEECCCchHHHH
Confidence 3444444444333332222 12455678888888887 4567889999999999999842 455688999888887643
Q ss_pred hhH---HHhcCCCCccCCCCCCCCCCCCCCCceEEccCC-CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHH
Q 011959 196 DPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 271 (474)
Q Consensus 196 ~~~---~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~ 271 (474)
... +...|. ++..+..+ |+++++++|+. ++++|++|.+.|+++.+.+ +++
T Consensus 115 ~~~~~~l~~~Gi-------------------~v~~vd~~~d~~~l~~~I~~---~Tk~I~~e~pgnP~~~v~D----i~~ 168 (432)
T PRK06702 115 NLFGVSLRKLGI-------------------DVTFFNPNLTADEIVALAND---KTKLVYAESLGNPAMNVLN----FKE 168 (432)
T ss_pred HHHHHHHHHCCC-------------------EEEEECCCCCHHHHHHhCCc---CCeEEEEEcCCCccccccC----HHH
Confidence 321 111121 24444454 88999999974 5789999988778888888 999
Q ss_pred HHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhcCC-CcceEEEEe-cH----------HHHH----
Q 011959 272 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG-RR----------DIME---- 333 (474)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~-~~----------~i~~---- 333 (474)
|+++|++||+++|+|+++. .+..+..+..-.||+ +++|.++| +--+|+++. .. ++.+
T Consensus 169 I~~iA~~~gi~livD~T~~-----tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~ 243 (432)
T PRK06702 169 FSDAAKELEVPFIVDNTLA-----TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPS 243 (432)
T ss_pred HHHHHHHcCCEEEEECCCC-----chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccccccccccc
Confidence 9999999999999999984 122233233334554 79998874 333443322 11 1110
Q ss_pred -----------------hhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hcC
Q 011959 334 -----------------MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAG 392 (474)
Q Consensus 334 -----------------~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~ 392 (474)
.... ...... ..+.+|+.+..++..|+.+ +...++..++...+.+.|++... .+|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-g~~~sp~~a~l~~rgL~Tl--~lR~~r~~~Na~~la~~L~~~p~V~~V~yP 319 (432)
T PRK06702 244 YHGVSYVQNFGAAAYIVKARV-QLLRDY-GNCMSPFNAYISNIGLETL--HLRMERHSENALAVAKWLADHERIEWVNYP 319 (432)
T ss_pred ccccchhhccchhhHHHHHHH-HHHHHc-cCCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 0000 001122 2477888888777776543 44556667777777777775321 111
Q ss_pred -Cee---------EE-eeeceeEEEEEe
Q 011959 393 -HAI---------CG-GYISGMFGFFFT 409 (474)
Q Consensus 393 -~~~---------~v-~~~g~~~~i~~~ 409 (474)
+.. .. .|.|.|+.|++.
T Consensus 320 gl~~~p~~~l~~~~~~~g~gg~~sf~l~ 347 (432)
T PRK06702 320 GLDSNENYSLAQKYLKKGASGVLTFGIK 347 (432)
T ss_pred CCCCCccHHHHHHhCcCCCceEEEEEec
Confidence 100 11 356888899885
No 318
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.56 E-value=1.5e-12 Score=125.74 Aligned_cols=197 Identities=22% Similarity=0.263 Sum_probs=128.9
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-----C-CCCCCHH-HHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHH
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-----S-FGAPCLL-ENVLAEMVISAVP-SIEMVRFVNSGTEACMGV 171 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-----~-~~~~~~~-~~~la~~l~~~~~-~~~~v~~~~sGseA~~~a 171 (474)
-|+|..+ .|..+|.|.+|+.+.+.... . ++.-.+. .++-++.++++.+ +..+|+||+++||++.++
T Consensus 45 vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 45 VYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred EEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 4666544 34579999999999887632 1 2211222 3444555666665 455699999999999999
Q ss_pred HHHh-HhhcC-Cc-EEEEEeCCCCCCchhHHHhc--CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCC
Q 011959 172 LRLA-RAFTG-RE-RIIKFEGCYHGHADPFLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGE 246 (474)
Q Consensus 172 l~~a-r~~~~-~~-~ii~~~~~yhg~~~~~~~~~--g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 246 (474)
++-. +.+.. .+ .||.++..|-...++...+. |..+..++.+ ..+. -|++.+++.|+ .+
T Consensus 119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~-~~~~-------------~d~~~~~~~i~---~~ 181 (428)
T KOG1549|consen 119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE-DSGL-------------VDISKLREAIR---SK 181 (428)
T ss_pred HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC-cccc-------------ccHHHHHHhcC---CC
Confidence 9843 33332 33 45555444433334443332 2222222222 1111 17888888887 37
Q ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceee--hhhhcCC-CcceE
Q 011959 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTT--LGKIIGG-GLPVG 323 (474)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t--~sK~l~~-G~~iG 323 (474)
+++|.+..++++.|.+.| +++|.++|+++++.+++|-+|. .|+ ...+--.+.+|.++ .-|.+|+ | +|
T Consensus 182 T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa---vG~-i~vDV~eln~D~~s~s~HK~ygp~~--iG 251 (428)
T KOG1549|consen 182 TRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA---VGK-IPVDVQELNADFLSISAHKIYGPPG--IG 251 (428)
T ss_pred ceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh---cCC-ccccHHHcCchheeeecccccCCCc--ce
Confidence 999999999999999999 9999999999999999999994 222 12222345667765 4599984 4 99
Q ss_pred EEEecH
Q 011959 324 AYGGRR 329 (474)
Q Consensus 324 ~~~~~~ 329 (474)
++.+++
T Consensus 252 aLYvr~ 257 (428)
T KOG1549|consen 252 ALYVRR 257 (428)
T ss_pred EEEEcc
Confidence 998886
No 319
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.55 E-value=1.1e-12 Score=130.98 Aligned_cols=309 Identities=14% Similarity=-0.006 Sum_probs=172.3
Q ss_pred CHH-HHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHhhCCC--CCeEEEeC-CHHHHHHHHHHHhHhhcCCcEEEEEeCCC
Q 011959 117 DDQ-VLAALGETMKKGTSFG-APCLLENVLAEMVISAVPS--IEMVRFVN-SGTEACMGVLRLARAFTGRERIIKFEGCY 191 (474)
Q Consensus 117 ~p~-v~~a~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~~--~~~v~~~~-sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (474)
+|+ |++|+.+......+.+ ...+...+..+.+++.+.. .++|+|+. |||++++.++... +.+++..++. .+.
T Consensus 24 ~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l--~~~~~~~vi~-~g~ 100 (378)
T PRK03080 24 RPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL--LGARRVDHLA-WES 100 (378)
T ss_pred ChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc--CCCCcceEEE-eCH
Confidence 577 8888876543211111 1245556777778877752 34788875 9999999999842 2222333333 456
Q ss_pred CCCchhHHH--hcCC-CCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHH
Q 011959 192 HGHADPFLV--KAGS-GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 268 (474)
Q Consensus 192 hg~~~~~~~--~~g~-~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~ 268 (474)
|+....... ..|. .+..+..+ ++. .-|+++ ++. ++.|.+..+.+.+|.+.|
T Consensus 101 f~~~~~~~~~~~~g~~~v~~~~~~--~g~------------~~d~~~----i~~----~~~V~~~h~~t~tG~~~p---- 154 (378)
T PRK03080 101 FGSKWATDVVKQLKLEDPRVLEAD--YGS------------LPDLSA----VDF----DRDVVFTWNGTTTGVRVP---- 154 (378)
T ss_pred HHHHHHHHHHhhcCCCCceEeccC--CCC------------CCCHhh----cCC----CCCEEEEecCCccceecc----
Confidence 665333211 1232 22211111 110 004444 221 344777777788999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceee--hhhhcCCCcceEEEEecHHHHHhhcCCCC------
Q 011959 269 LNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRRDIMEMVAPAGP------ 340 (474)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t--~sK~l~~G~~iG~~~~~~~i~~~~~~~~~------ 340 (474)
+++|.+ ++||+++|+|-+|+ + .......+ . .|+++ ..|+|++...+|+++.+++.++.+.+...
T Consensus 155 i~~I~~--~~~g~~~vVDa~qs-~-G~~pidv~--~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~ 226 (378)
T PRK03080 155 VARWIG--ADREGLTICDATSA-A-FALPLDWS--K--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPK 226 (378)
T ss_pred chhhcc--ccCCCeEEEecccc-c-ccCCCCHH--H--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCch
Confidence 878888 78999999999995 1 01111122 1 37664 56999754459999999999887654210
Q ss_pred -------------cccccCCCCC-hHHHHHHHHHHHHhcCC-C---HHHHHHHHHHHHHHHHHHHhhhcCCeeEEee-ec
Q 011959 341 -------------MYQAGTLSGN-PLAMTAGIHTLKRLKEP-G---TYEYLNKITGELTQGIIDAGKKAGHAICGGY-IS 401 (474)
Q Consensus 341 -------------~~~~~t~~~~-~~~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g 401 (474)
.+..+|++.+ ..+..+..++|+.+.+. + ..++.+++.+++++.|+++..-......-.. .+
T Consensus 227 ~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~ 306 (378)
T PRK03080 227 FFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSN 306 (378)
T ss_pred hheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCc
Confidence 0112233333 33445556788887653 3 3345555555666666544210000000011 12
Q ss_pred eeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.++.+.+.+ .+......+...++++|+++..++ ...+|++ ...|++||++++++|++++++
T Consensus 307 ~i~~~~~~~-----------~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 307 TSVTLDFVD-----------AQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred cEEEEEcCC-----------chHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 334443321 000111345666777888876543 2457775 567999999999999998765
No 320
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.55 E-value=2.5e-12 Score=139.23 Aligned_cols=304 Identities=14% Similarity=0.151 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCCHH----HHHHHHHHHhHhhcC--CcEEEEEeCCCCCCchhHHHhcCCCCccCCCC
Q 011959 139 LLENVLAEMVISAVPSIEMVRFVNSGT----EACMGVLRLARAFTG--RERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (474)
Q Consensus 139 ~~~~~la~~l~~~~~~~~~v~~~~sGs----eA~~~al~~ar~~~~--~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (474)
+...++.++|++++ +.+.|.|+++++ +|+..+++....-.| ++++|+...+-||.....+...|..+..++..
T Consensus 568 ~~~~~~r~~la~i~-g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d 646 (993)
T PLN02414 568 EMFEDLGDLLCEIT-GFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTD 646 (993)
T ss_pred HHHHHHHHHHHHHh-CCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccC
Confidence 44568888888888 679999998777 788888874321111 12367777788998777776655544332221
Q ss_pred CCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc
Q 011959 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 292 (474)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (474)
..|.. |+++|+++++.+.+++++|++...++.+|...+ +++|.++|+++|+++++|-++.
T Consensus 647 -~~G~v-------------Dle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vDgAq~-- 706 (993)
T PLN02414 647 -AKGNI-------------NIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMDGANM-- 706 (993)
T ss_pred -CCCCc-------------CHHHHHHHHhccCCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEEecCH--
Confidence 11211 899999999876567899999888888998888 9999999999999999999993
Q ss_pred ccCCCccccccCCCCceeeh--hhhcC-----CCcceEEEEecHHHHHhhcCCC--C----c---c--cccCCC----CC
Q 011959 293 RLAYGGAQEYFGVTPDLTTL--GKIIG-----GGLPVGAYGGRRDIMEMVAPAG--P----M---Y--QAGTLS----GN 350 (474)
Q Consensus 293 r~g~~~~~~~~g~~pdi~t~--sK~l~-----~G~~iG~~~~~~~i~~~~~~~~--~----~---~--~~~t~~----~~ 350 (474)
.+......-.....|++++ .|+|+ ||-.+|.+.++++++..+-... . . . ..+|.+ ++
T Consensus 707 -~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~ 785 (993)
T PLN02414 707 -NAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGS 785 (993)
T ss_pred -HhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhh
Confidence 1110111111233577754 68776 3345999999988776553110 0 0 0 012322 33
Q ss_pred hHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHH
Q 011959 351 PLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 427 (474)
Q Consensus 351 ~~~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 427 (474)
.+.+.++...++.+-.+++ .++...+..|++++|.+. +++... ...|. +.-+|.-+- ..+. .......
T Consensus 786 al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---~~~~~~-~~~~~-~~hEfv~~~-~~l~---~~~g~~~ 856 (993)
T PLN02414 786 ALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---YPVLFR-GKNGT-CAHEFIIDL-RPFK---NTAGIEP 856 (993)
T ss_pred HHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---CCcccc-CCCCC-eeeeEEEec-cccc---cccCCCH
Confidence 3444455555555544555 666777888999988763 232211 11121 111221100 0000 0001122
Q ss_pred HHHHHHHHHCCeEecccC---CcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 428 ARFYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 428 ~~~~~~l~~~Gv~v~~~~---~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
..+.++|++.|+...... .+.+++ .-..|++|||+++++|..+.++
T Consensus 857 ~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 857 EDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred HHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 668889999998754322 223444 4567999999999999887654
No 321
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.55 E-value=6.5e-13 Score=132.20 Aligned_cols=213 Identities=16% Similarity=0.117 Sum_probs=135.3
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++...+|.+.++++. +.+..++++||+.|+..++. ....+++||+.++.|.+..........
T Consensus 48 ~~p~~~~Le~~lA~l~-g~~~~~~~~sG~aai~~~~~---~l~~Gd~Viv~~~~y~~~~~~~~~~~~------------- 110 (377)
T PRK07671 48 GNPTRAALEELIAVLE-GGHAGFAFGSGMAAITAVMM---LFSSGDHVILTDDVYGGTYRVMTKVLN------------- 110 (377)
T ss_pred CChHHHHHHHHHHHHh-CCCceEEeCCHHHHHHHHHH---HhCCCCEEEECCCccchHHHHHHHHHh-------------
Confidence 4566778888888887 44567788889998877654 345568899988888664432221100
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
..+.++..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|+++|+++|+||+|.......
T Consensus 111 ---~~G~~v~~v~~~d~~~l~~ai~~---~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~~~~~ 180 (377)
T PRK07671 111 ---RFGIEHTFVDTSNLEEVEEAIRP---NTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTPYWQS 180 (377)
T ss_pred ---cCCeEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 01113444555689999998863 5789999888888898887 9999999999999999999995321111
Q ss_pred CccccccCCCCcee--ehhhhcCC-C-cceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
. .....|++ +++|.++| + .-.|++++ ++++++.+.. .........+|..+..++..++.+ ...++
T Consensus 181 p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~---~~~~~g~~~~~~~a~l~~~~l~tl--~~R~~ 250 (377)
T PRK07671 181 P-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHF---VQNSTGGILGPQDSWLLLRGLKTL--GIRME 250 (377)
T ss_pred h-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHH---HHHhhcCCCCHHHHHHHHcCcChH--HHHHH
Confidence 1 12234665 68999984 2 33455555 5677776652 111112234565555544443332 23455
Q ss_pred HHHHHHHHHHHHHHH
Q 011959 372 YLNKITGELTQGIID 386 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~ 386 (474)
+..++...+.+.|++
T Consensus 251 ~~~~na~~la~~L~~ 265 (377)
T PRK07671 251 EHETNSRAIAEFLNN 265 (377)
T ss_pred HHHHHHHHHHHHHHc
Confidence 556666666666654
No 322
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.54 E-value=3.1e-12 Score=126.42 Aligned_cols=341 Identities=14% Similarity=0.080 Sum_probs=181.9
Q ss_pred CEEEeccCChhhccCCCCCHHHHHH-HHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHh
Q 011959 99 NEYIDYVGSWGPAIIGHADDQVLAA-LGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA 177 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a-~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~ 177 (474)
..|||+.+-.++ +.+.++ +.+.+.-...|+. ++...+|.+.+++++ +.+.+++++||+.|...+.. .
T Consensus 38 ~v~iDLltDsgT-------~aMs~~q~a~~~~GDe~yag-~~s~~~lE~~va~~~-G~~~av~v~sGT~Al~ll~~---l 105 (450)
T TIGR02618 38 DVYIDLLTDSGT-------NAMSDKQWAGLMMGDEAYAG-SRNFYHLERTVRELY-GFKYVVPTHQGRGAENLLSQ---I 105 (450)
T ss_pred ceEEEcccCCCc-------HHHHHHHHHHhhhcchhhcC-CCcHHHHHHHHHHHH-CCCeEEEcCCHHHHHHHHHH---h
Confidence 468898876443 566666 4443322122332 233356666666666 78899999999999887543 4
Q ss_pred hcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC--C-CHHHHHHHHhcC-CCCeEEEEEc
Q 011959 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF--N-DVSALENLFENN-KGEIAAIILE 253 (474)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~--~-d~~~le~~l~~~-~~~~a~vi~e 253 (474)
..++++.| ..+.|...+...+...|............+. ....|+ | |++.|++.|+.. .+.++.|.++
T Consensus 106 ~l~pGDeV-psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~-------~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e 177 (450)
T TIGR02618 106 AIKPGDYV-PGNMYFTTTRYHQEKNGATFVDIIIDEAHDA-------QLNIPFKGNVDLKKLQKLIDEVGADKIPYICLA 177 (450)
T ss_pred CCCCcCEE-CCceeHHHHHHHHHhCCeEEEeeeccccccc-------ccCCCCCCCcCHHHHHHHhccccCcccCceEEE
Confidence 44554544 3333334333334444441111100000000 000111 1 899999999853 2345566665
Q ss_pred cccCC-CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCcc----ccccCC-----------CCceeehhhhcC
Q 011959 254 PVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGA----QEYFGV-----------TPDLTTLGKIIG 317 (474)
Q Consensus 254 p~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~----~~~~g~-----------~pdi~t~sK~l~ 317 (474)
-..|. ||..++..+ +++|+++|++||+.||.|-++.- ..+ .+. ..+.+. .-|. +++|+.-
T Consensus 178 ~t~N~~GG~pvs~~~-l~~I~elA~~~Gl~vi~DaAR~~-gNA-~~I~~re~g~~~~~i~ei~~e~~~~aD~-~~~S~~K 253 (450)
T TIGR02618 178 VTVNLAGGQPVSMAN-MREVRELCEAHGIKVFYDATRCV-ENA-YFIKEREQGYEDKSIAEILKEMMSYADG-CTMSGKK 253 (450)
T ss_pred EecccCCCeeCCHHH-HHHHHHHHHHcCCEEEEEccchh-hCh-hhhhcccccccCCCHHHHHHHHhccCcE-EEEeecc
Confidence 55554 566555444 99999999999999999998841 000 000 001111 2344 4444443
Q ss_pred -CCcceEEEEe--cHHHHHhhcCCCCcc-cccCCCCC-hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011959 318 -GGLPVGAYGG--RRDIMEMVAPAGPMY-QAGTLSGN-PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (474)
Q Consensus 318 -~G~~iG~~~~--~~~i~~~~~~~~~~~-~~~t~~~~-~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (474)
+|.|+|.+++ ++++++.++.....+ .+-|+++- .-.+.|...+|+...+..+.++.....++|.+.|.+. +
T Consensus 254 d~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~----G 329 (450)
T TIGR02618 254 DCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA----G 329 (450)
T ss_pred CCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC----C
Confidence 3457777754 778888776432222 22244441 1233344445655444566667677788888888876 4
Q ss_pred CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEe---ccc---C-----------CcceEE---
Q 011959 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYF---APS---Q-----------FEAGFT--- 451 (474)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v---~~~---~-----------~~~~~~--- 451 (474)
++...+..|+.+.++...- ..++....-|. ..++-.|. +-||-- ... . ...+|+
T Consensus 330 vpv~~p~ggh~V~vda~~~-lph~~~~~~p~----~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaip 404 (450)
T TIGR02618 330 VPIVEPVGGHAVFLDARRF-LPHIPQDQFPA----QSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIP 404 (450)
T ss_pred CcccCCCCcceEEEEhHHh-CCCCChhhChH----HHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccc
Confidence 4433355667777665431 01111111122 33433333 445421 111 0 012343
Q ss_pred ecCCcHHHHHHHHHHHHHHHh
Q 011959 452 SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 452 ~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.-..|.+++|...+++..+.+
T Consensus 405 rr~yt~~h~~~v~~~~~~~~~ 425 (450)
T TIGR02618 405 RRVYTYAHMDVVADGIIKLYK 425 (450)
T ss_pred cccccHhHHHHHHHHHHHHHh
Confidence 246689999999999988765
No 323
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.54 E-value=6.7e-13 Score=132.13 Aligned_cols=168 Identities=17% Similarity=0.158 Sum_probs=113.9
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++...+|.++++++. +.+..++++||+.|+.+++. .+..+++||+.++.|++.......... ..+
T Consensus 48 ~~p~~~~Le~~la~l~-g~~~al~~~SG~~Al~~~l~---~l~pGd~Vi~~~~~y~~t~~~~~~~~~----------~~g 113 (380)
T PRK06176 48 GNPTRFALEELIADLE-GGVKGFAFASGLAGIHAVFS---LFQSGDHVLLGDDVYGGTFRLFDKVLV----------KNG 113 (380)
T ss_pred CChhHHHHHHHHHHHh-CCCCEEEECCHHHHHHHHHH---HcCCCCEEEEcCCChhHHHHHHHHHHH----------hcC
Confidence 4455677888888877 45667888999999987665 345678888888888664322211100 011
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
.++..++..|++++++.++. ++++|++|.+.|++|.+.+ +++|.++|++||++||+|++|.....+.
T Consensus 114 ------i~v~~vd~~d~e~l~~ai~~---~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~~~~~ 180 (380)
T PRK06176 114 ------LSCTIIDTSDLSQIKKAIKP---NTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATPYYQN 180 (380)
T ss_pred ------eEEEEcCCCCHHHHHHhcCc---CceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCccccccCC
Confidence 12344455589999988863 6789999988888999888 9999999999999999999996321111
Q ss_pred CccccccCCCCcee--ehhhhcCC-C-cceEEEEec-HHHHHhhc
Q 011959 297 GGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGR-RDIMEMVA 336 (474)
Q Consensus 297 ~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~~-~~i~~~~~ 336 (474)
. .+...|++ +++|.++| | .-.|+++++ +++.+.++
T Consensus 181 p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 181 P-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred c-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 1 12334665 57799985 4 335556664 56655554
No 324
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.53 E-value=1.9e-12 Score=128.23 Aligned_cols=236 Identities=13% Similarity=0.053 Sum_probs=152.2
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
++....|+++|+++- +.+.+++++||+.|+.+++.. .+..++.||+....|.+.....-.... ..|+
T Consensus 61 nPt~~~le~~la~LE-g~~~a~~~~SGmaAi~~~~~~--ll~~GD~Vv~~~~~Yg~t~~l~~~~l~----------~~Gi 127 (395)
T PRK08114 61 TLTHFSLQEAMCELE-GGAGCALYPCGAAAVANAILA--FVEQGDHVLMTGTAYEPTQDFCSKILS----------KLGV 127 (395)
T ss_pred ChhHHHHHHHHHHHh-CCCeEEEEhHHHHHHHHHHHH--HcCCCCEEEEeCCCcHHHHHHHHHHHH----------hcCc
Confidence 455677888888776 567888999999999998873 245567788777777664433211100 0111
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhC--CEEEEeccccCcccC
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG--ALLIFDEVMTGFRLA 295 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g--~llI~DEv~~g~r~g 295 (474)
++..++..|.+.+++.++. ++++|++|.+.|+.|.+.+ +++|+++|+++| +++|+|.++. .+
T Consensus 128 ------~v~~vd~~d~~~l~~~l~~---~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~a---~p 191 (395)
T PRK08114 128 ------TTTWFDPLIGADIAKLIQP---NTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTWA---AG 191 (395)
T ss_pred ------EEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCCc---cc
Confidence 3555556689999999863 6899999999999999999 999999999985 9999999994 12
Q ss_pred CCccccccCCCCcee--ehhhhcCC-C-cceEEEEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHH
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (474)
.. +.-.....|++ +.+|.++| | .-.|.++.++++.+.+... ....+ ...+|..+...+..|+.+ +-..+
T Consensus 192 ~~--~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~--~~~~G-~~~~p~~a~l~~rgl~TL--~lR~~ 264 (395)
T PRK08114 192 VL--FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN--SYLMG-QMVDADTAYMTSRGLRTL--GVRLR 264 (395)
T ss_pred cc--cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH--HHhcc-CCCCHHHHHHHHcCCCcH--HHHHH
Confidence 12 22233345665 67899986 3 6677777788776655421 11112 244566655544444322 23445
Q ss_pred HHHHHHHHHHHHHHHHhh----hcCC-e---------eEEeeeceeEEEEEe
Q 011959 372 YLNKITGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFFT 409 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~----~~~~-~---------~~v~~~g~~~~i~~~ 409 (474)
+..++...+.+.|++.-. .||. . ....+.|.|+.|++.
T Consensus 265 ~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK08114 265 QHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLK 316 (395)
T ss_pred HHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEec
Confidence 666667777777664310 0110 0 012367889999985
No 325
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.53 E-value=3.2e-13 Score=118.77 Aligned_cols=164 Identities=26% Similarity=0.230 Sum_probs=109.7
Q ss_pred HHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCC
Q 011959 142 NVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKG 220 (474)
Q Consensus 142 ~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~ 220 (474)
.++.+.+++.++ +.+++++++||++|+..+++.++ ..+++|++.++.|++.........|..+..++.......
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--- 77 (170)
T cd01494 3 EELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL--GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYG--- 77 (170)
T ss_pred HHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhC--CCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCcc---
Confidence 456677777763 56789999999999999999532 236789999989988653333333432222111110000
Q ss_pred CCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCcc
Q 011959 221 ATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299 (474)
Q Consensus 221 ~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~ 299 (474)
..+.+.+++... .++++++++++.++++|...+ +++|.++|+++|+++|+||+|.++ .....
T Consensus 78 ---------~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-- 140 (170)
T cd01494 78 ---------GLDVAILEELKA--KPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAPG-- 140 (170)
T ss_pred ---------chhhhhhhhccc--cCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccccccc--
Confidence 002224433322 357899999999999998888 788999999999999999999877 43221
Q ss_pred ccccCCCCceeehh--hhcCCCcceEEEEec
Q 011959 300 QEYFGVTPDLTTLG--KIIGGGLPVGAYGGR 328 (474)
Q Consensus 300 ~~~~g~~pdi~t~s--K~l~~G~~iG~~~~~ 328 (474)
.......+|+++.| |.+++ .++|+++++
T Consensus 141 ~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 141 VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 12223457887655 99987 789998764
No 326
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=1.8e-12 Score=130.61 Aligned_cols=158 Identities=15% Similarity=0.161 Sum_probs=107.2
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
++...+|.+.++++. +.+..++++||+.|+..++.. ....++.||+....|.+.. ..+...- . ..|
T Consensus 68 ~p~~~~Le~~lA~l~-g~~~av~~sSG~aAi~~al~a--ll~~Gd~Vv~~~~~y~~t~-~~~~~~l--------~-~~G- 133 (436)
T PRK07812 68 NPTQDVVEQRIAALE-GGVAALLLASGQAAETFAILN--LAGAGDHIVSSPRLYGGTY-NLFHYTL--------P-KLG- 133 (436)
T ss_pred CchHHHHHHHHHHHh-CCCeEEEEccHHHHHHHHHHH--HhCCCCEEEEeCCcchHHH-HHHHHHh--------h-cCe-
Confidence 455678888888887 556789999999999999973 2345677777766665432 2211100 0 011
Q ss_pred CCCCCCceEEcc-CCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccC
Q 011959 218 PKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (474)
Q Consensus 218 ~~~~~~~~~~~~-~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (474)
..+..++ ..|++++++.++ +++++|++|.+.|+.|.+.+ +++|.++|++||+++|+|+++. +..
T Consensus 134 -----i~v~~vdd~~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~~~~-- 199 (436)
T PRK07812 134 -----IEVSFVEDPDDLDAWRAAVR---PNTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIATPYL-- 199 (436)
T ss_pred -----EEEEEECCCCCHHHHHHhCC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCccccc--
Confidence 1233332 347888888876 36789999999999999999 9999999999999999999984 221
Q ss_pred CCccccccCCCCcee--ehhhhcCC-CcceEEEEe
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG 327 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~ 327 (474)
........|++ +++|.++| |--+|+++.
T Consensus 200 ----~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 200 ----IRPLEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred ----CCchhcCCCEEEEecccccCCCCCeEEEEEE
Confidence 11112235654 78999984 434555544
No 327
>PLN02880 tyrosine decarboxylase
Probab=99.51 E-value=3.8e-12 Score=130.37 Aligned_cols=313 Identities=12% Similarity=0.054 Sum_probs=181.0
Q ss_pred CCHHHHHHHHHHHhhCCCCC--------eEEEeCCHHHHHHHHHHHhHhhc-------C-CcEEEEEeCCCCCCchhHHH
Q 011959 137 PCLLENVLAEMVISAVPSIE--------MVRFVNSGTEACMGVLRLARAFT-------G-RERIIKFEGCYHGHADPFLV 200 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~--------~v~~~~sGseA~~~al~~ar~~~-------~-~~~ii~~~~~yhg~~~~~~~ 200 (474)
..+++.++.+++++.++-++ .-++++|||+||..||..||... + ++-+|+....-|.+..-++.
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 45788999999999885222 36789999999999999998642 1 23355555556887777777
Q ss_pred hcCCCC---ccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHHHHHH
Q 011959 201 KAGSGV---ATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 274 (474)
Q Consensus 201 ~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~ 274 (474)
..|.+. ..++...... ..+ |+++|++.|++ .+..+.+|+..-...++|.+.| +++|.+
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~---------~~m---d~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~ 263 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTN---------YAL---APELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGK 263 (490)
T ss_pred HcCCCHHHEEEeecCCCcC---------CcC---CHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHH
Confidence 766542 2211110000 011 89999998864 2223556666666667899999 999999
Q ss_pred HHHHhCCEEEEeccccCc-ccCCCccccccCC-CCceee--hhhhcCCCcceEEEEecHH--HHHhhcCCCCcc-c----
Q 011959 275 ITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRRD--IMEMVAPAGPMY-Q---- 343 (474)
Q Consensus 275 l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~-~pdi~t--~sK~l~~G~~iG~~~~~~~--i~~~~~~~~~~~-~---- 343 (474)
+|++||+++++|-+|.|+ ..-..+.....|+ ..|.++ +-|.+...+..|.++.+.. +.+.+.....+. .
T Consensus 264 i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~ 343 (490)
T PLN02880 264 IAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQ 343 (490)
T ss_pred HHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCcccc
Confidence 999999999999999876 3221111112343 467665 6799987788999987642 223332110000 0
Q ss_pred ------ccCC---CCChHHHHHHHHHHHHhcCCCHHHHHH---HHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecC
Q 011959 344 ------AGTL---SGNPLAMTAGIHTLKRLKEPGTYEYLN---KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 411 (474)
Q Consensus 344 ------~~t~---~~~~~~~aaa~aal~~~~~~~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~ 411 (474)
...+ .+..+.......+|+.+-.+++.++++ ++.+++.+.|++.. ++..-.+....++.|.+...
T Consensus 344 ~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~---~~el~~~~~~~iv~Fr~~~~ 420 (490)
T PLN02880 344 ANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDS---RFEVVTPRIFSLVCFRLVPP 420 (490)
T ss_pred ccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCC---CEEEecCCceEEEEEEEeCC
Confidence 0000 111111223334455554456666665 66777766665431 12111222333444444321
Q ss_pred CCcCcccccccchHHHHHHHHHHHHCC-eEeccc---CCcceEEe---cCCcHHHHHHHHHHHHHHHhh
Q 011959 412 PVYNFEDAKKSETTKFARFYRGMLEEG-VYFAPS---QFEAGFTS---LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~v~~~---~~~~~~~~---~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.. + .........++.+.|.+.| +++... +...+|++ ...|++|++.+++.|.+..++
T Consensus 421 ~~-~----~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 421 KN-N----EDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred CC-C----hhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 00 0 0001223345667777666 444433 22345553 566789999999999887654
No 328
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.51 E-value=6.3e-12 Score=126.88 Aligned_cols=159 Identities=19% Similarity=0.166 Sum_probs=111.3
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++...+|.+.++++.+ .+.+++++||++|+..++... ...+++||+....|++.......... ..|
T Consensus 62 ~~p~~~~le~~lA~l~g-~~~av~~sSGt~Al~~al~~l--l~~Gd~Vi~~~~~y~~t~~~~~~~l~----------~~G 128 (433)
T PRK08134 62 SNPTVAVLEERVAALEG-GVGAIATASGQAALHLAIATL--MGAGSHIVASSALYGGSHNLLHYTLR----------RFG 128 (433)
T ss_pred cChHHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHH--hCCCCEEEEeCCccHHHHHHHHHHHh----------hCC
Confidence 34557788888888874 456899999999999998742 44567888887777764322211000 011
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CcccC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (474)
.++..++.+|++++++.|+. ++++|+++.+.|++|.+.+ +++|.++|++||+++|+|.+|. ++..
T Consensus 129 ------i~v~~vd~~d~~~l~~~i~~---~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a~~~~~- 194 (433)
T PRK08134 129 ------IETTFVKPGDIDGWRAAIRP---NTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFTTPYLL- 194 (433)
T ss_pred ------eEEEEECCCCHHHHHHhcCC---CCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence 13455555689999999873 6789999998888999999 9999999999999999999994 3211
Q ss_pred CCccccccCCCCcee--ehhhhcCC-CcceEEEEe
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG 327 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~ 327 (474)
.......|++ +..|.++| |-.+|+++.
T Consensus 195 -----~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 195 -----RPFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred -----CchhcCCCEEEeccccccCCCCCceEEEEE
Confidence 1112334665 56798885 555666644
No 329
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.50 E-value=2.1e-11 Score=120.85 Aligned_cols=343 Identities=15% Similarity=0.060 Sum_probs=176.3
Q ss_pred CCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhH
Q 011959 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 176 (474)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar 176 (474)
...|||+.+-.++ +.+.++....+..+. .|+. ++-..+|.+.+++++ +.+.+++++||+.|+..+..
T Consensus 44 ~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~Yag-d~s~~~LE~~vAe~l-G~e~aV~v~sGTaAl~ll~~--- 111 (460)
T PRK13237 44 EDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEAYAG-SRNFYHLEETVQEYY-GFKHVVPTHQGRGAENLLSR--- 111 (460)
T ss_pred CcEEEECcccCCc-------hhccHHHHHHHhhcchhhcC-CCcHHHHHHHHHHHH-CCCeEEEeCCHHHHHHHHHH---
Confidence 3467898877543 344444333333332 2332 222345555555555 78899999999999998654
Q ss_pred hhcCCcEEEEEeCCCCCCchhH-HHhcCCCCccCCCCCCCCC-CCCCCCceEEccCC-CHHHHHHHHhcC-CCCeEEEEE
Q 011959 177 AFTGRERIIKFEGCYHGHADPF-LVKAGSGVATLGLPDSPGV-PKGATYETLTAPFN-DVSALENLFENN-KGEIAAIIL 252 (474)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~-~~~~g~~~~~~~~~~~~g~-~~~~~~~~~~~~~~-d~~~le~~l~~~-~~~~a~vi~ 252 (474)
...+++++| .+.+|-.+..+ +...|...... ...... +. ....+.+| |++.|++.|+++ +.+++.+.+
T Consensus 112 l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi--~~d~a~~~~----~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a 183 (460)
T PRK13237 112 IAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDI--IIDEAHDAQ----SDHPFKGNVDLDKLQALIDEVGAENIAYICL 183 (460)
T ss_pred hCCCCcCEE--CCccchHhhHHHHHhCCcEEEee--ecccccccc----cCCCCCCCcCHHHHHHHhccccCCccCceEE
Confidence 334444444 33334333333 44444311100 000000 00 00011122 899999999853 334555554
Q ss_pred ccccCC-CCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C---c---ccCCCcccc------ccCCCCceee--hhhhc
Q 011959 253 EPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G---F---RLAYGGAQE------YFGVTPDLTT--LGKII 316 (474)
Q Consensus 253 ep~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g---~---r~g~~~~~~------~~g~~pdi~t--~sK~l 316 (474)
+-..|. ||...+..+ +++|+++|++||+.||.|-++. | | |........ ..+-.-|++| +.|.+
T Consensus 184 ~itvn~~GGqpvs~~~-m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~ 262 (460)
T PRK13237 184 AVTVNLAGGQPVSMAN-MRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDC 262 (460)
T ss_pred EEecccCCCeeCCHHh-HHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCC
Confidence 443444 465554444 9999999999999999999983 4 3 111110000 0111346665 45766
Q ss_pred CCCcce-EEEEe-cHHHHHhhcCCCCcc-cccCCCCChH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011959 317 GGGLPV-GAYGG-RRDIMEMVAPAGPMY-QAGTLSGNPL-AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (474)
Q Consensus 317 ~~G~~i-G~~~~-~~~i~~~~~~~~~~~-~~~t~~~~~~-~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (474)
+. ++ |+++. ++++.+.++.....+ .+.||++-.- -+.|....|+...+.++.++..+..++|.+.|.+. +
T Consensus 263 ~~--~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~----G 336 (460)
T PRK13237 263 LV--NIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA----G 336 (460)
T ss_pred CC--CCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC----C
Confidence 64 44 55544 567777776432222 2335554322 22232234444444566666667778888877764 5
Q ss_pred CeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEe-------ccc---C-------CcceEE---
Q 011959 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYF-------APS---Q-------FEAGFT--- 451 (474)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v-------~~~---~-------~~~~~~--- 451 (474)
++...+..|.-+.++...- ..++....-|. ..++-.|. +-||-- ... + ...+|+
T Consensus 337 vpv~~p~ggH~v~vda~~~-lph~~~~~~p~----~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaip 411 (460)
T PRK13237 337 VPIVEPVGGHAVFLDARRF-LPHLPQDQFPA----QALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIP 411 (460)
T ss_pred CceecCCCceEEEEEhHHh-CCCCCcccChH----HHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccc
Confidence 5544455555445543220 01111111122 33433333 445422 111 0 012344
Q ss_pred ecCCcHHHHHHHHHHHHHHHh
Q 011959 452 SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 452 ~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.-..|.+++|...++|..+.+
T Consensus 412 rr~yt~~h~~~v~~~~~~~~~ 432 (460)
T PRK13237 412 RRVYTYAHMDVVADSVIKLYK 432 (460)
T ss_pred cccccHHHHHHHHHHHHHHHH
Confidence 246689999999999988765
No 330
>PLN02263 serine decarboxylase
Probab=99.50 E-value=4.2e-11 Score=119.84 Aligned_cols=291 Identities=13% Similarity=0.027 Sum_probs=178.5
Q ss_pred CCHHHHHHHHHHHhhCCC-CC--eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCC
Q 011959 137 PCLLENVLAEMVISAVPS-IE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 213 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~-~~--~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~ 213 (474)
..+++.++-+++++.++. .+ .-.+++||||||..|+..||.+..+ .+++....-|-+..-+....|.++..++...
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~-~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~ 209 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDTLV 209 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCC-cEEEEcCCccHHHHHHHHhcCCcceEeccCC
Confidence 357788999999998862 22 4688999999999999999986543 4666666777777777776666544332211
Q ss_pred CCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCC-----EEEEecc
Q 011959 214 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA-----LLIFDEV 288 (474)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~-----llI~DEv 288 (474)
...+ |+++|++.|.++...+.+|+..-...+.|.+-| +++|.++|++||+ +|.+|-+
T Consensus 210 ~g~m--------------D~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA 271 (470)
T PLN02263 210 SGEI--------------DCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGA 271 (470)
T ss_pred CCcC--------------cHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEecc
Confidence 1111 899999988765444556666655556899999 9999999999997 9999999
Q ss_pred ccCc-cc--CCCccccccCCCCceee--hhhhcCCCcceEEEEecHHHHHhhcCCCCccc--ccCCCCCh--HHHHHHHH
Q 011959 289 MTGF-RL--AYGGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ--AGTLSGNP--LAMTAGIH 359 (474)
Q Consensus 289 ~~g~-r~--g~~~~~~~~g~~pdi~t--~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~--~~t~~~~~--~~~aaa~a 359 (474)
+.|+ -. ...-.++ +....|-++ .-|.++..++.|.++.+++.++.+.....+.. -.|..++- ........
T Consensus 272 ~GG~~lPf~~~~~~~d-f~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 272 LFGLMMPFVKRAPKVT-FKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 350 (470)
T ss_pred chhhHhhhcccccccC-CCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence 9887 31 1100011 111245554 45988888899999998776655532111100 01222221 22344455
Q ss_pred HHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHH
Q 011959 360 TLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 436 (474)
Q Consensus 360 al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 436 (474)
+|+.+-.+ +..++..++.+++.++|++. ++........+.+. |.. |. ..+..
T Consensus 351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~----g~~~~~~p~s~~V~--f~~-----------p~--------~~~~~ 405 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREA----GISAMLNELSSTVV--FER-----------PK--------DEEFV 405 (470)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEeCCCceEEE--Eec-----------Cc--------hHHhh
Confidence 66655443 44455556667777777664 33322233333332 221 11 11134
Q ss_pred CCeEecccCCc-ceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 437 EGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 437 ~Gv~v~~~~~~-~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
+|-.+...+.. ++.+...++.+.+|++++-|++..+
T Consensus 406 ~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 406 RRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred cceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 66666554322 2333444688999999999988754
No 331
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.49 E-value=5.7e-12 Score=124.67 Aligned_cols=234 Identities=18% Similarity=0.156 Sum_probs=145.8
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
.++....|.+.|+++. +.+.++.++||..|+..++.. ....++.||.....|++.....-.... ..|
T Consensus 53 gnPt~~~le~~la~Le-~g~~a~~~~SGmaAi~~~l~~--ll~~Gd~iv~~~~~Y~~t~~~~~~~l~----------~~g 119 (386)
T PF01053_consen 53 GNPTVRALEQRLAALE-GGEDALLFSSGMAAISAALLA--LLKPGDHIVASDDLYGGTYRLLEELLP----------RFG 119 (386)
T ss_dssp C-HHHHHHHHHHHHHH-T-SEEEEESSHHHHHHHHHHH--HS-TTBEEEEESSSSHHHHHHHHHCHH----------HTT
T ss_pred ccccHHHHHHHHHHhh-cccceeeccchHHHHHHHHHh--hcccCCceEecCCccCcchhhhhhhhc----------ccC
Confidence 4566778888888777 557899999999999998874 234468888888888874322221100 011
Q ss_pred CCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhC-CEEEEeccccCcccC
Q 011959 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG-ALLIFDEVMTGFRLA 295 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g-~llI~DEv~~g~r~g 295 (474)
.++..++..|++++++.++. ++++|++|++.|+...+.+ +++|+++|+++| +++|+|.....
T Consensus 120 ------v~v~~~d~~d~~~l~~~l~~---~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~at---- 182 (386)
T PF01053_consen 120 ------VEVTFVDPTDLEALEAALRP---NTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVDNTFAT---- 182 (386)
T ss_dssp ------SEEEEESTTSHHHHHHHHCT---TEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEECTTTH----
T ss_pred ------cEEEEeCchhHHHHHhhccc---cceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEeeccccc----
Confidence 13555666789999999984 7999999999999888888 999999999998 99999999842
Q ss_pred CCccccccCCCCcee--ehhhhcCC-C-cceEEEEec--HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCH
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGR--RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G-~~iG~~~~~--~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (474)
+..+.-+....|++ +++|.++| | .-.|.++.+ +++.+.++.. ....+ ...+|..+...+..|+.+ .-.
T Consensus 183 -p~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~--~~~~G-~~~~p~da~ll~rgl~Tl--~~R 256 (386)
T PF01053_consen 183 -PYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREF--RRLLG-ATLSPFDAWLLLRGLRTL--PLR 256 (386)
T ss_dssp -TTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHH--HHHHT--B--HHHHHHHHHHHTTH--HHH
T ss_pred -eeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcch--hhhcC-ccchHHHHHHHhcCCCcH--HHH
Confidence 11122222234655 79999985 3 456777755 4677666521 11111 133455555444444322 334
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCeeEE------------------eeeceeEEEEEec
Q 011959 370 YEYLNKITGELTQGIIDAGKKAGHAICG------------------GYISGMFGFFFTE 410 (474)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~~~v------------------~~~g~~~~i~~~~ 410 (474)
.++..++...+.+.|++ ++.+..| .+.|.++.|++..
T Consensus 257 ~~~~~~nA~~lA~~L~~----hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~ 311 (386)
T PF01053_consen 257 MERQNENAEALAEFLEE----HPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG 311 (386)
T ss_dssp HHHHHHHHHHHHHHHHT----STTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHh----CCCCCeEEEcccccccceeeeeecccccCceeEEEecc
Confidence 55666667667666654 3433222 2566789999864
No 332
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.49 E-value=2.4e-11 Score=130.20 Aligned_cols=303 Identities=15% Similarity=0.129 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhc-----CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCC
Q 011959 139 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 213 (474)
Q Consensus 139 ~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~-----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~ 213 (474)
+...++.++|++.++-...-++.++|+.|..+++..+|.+. +++.+++...+-||.........|..+..++..
T Consensus 530 q~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d- 608 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCD- 608 (939)
T ss_pred HHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccC-
Confidence 45678999999998522455677889988888887777652 234566667788988776666666543332211
Q ss_pred CCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC-c
Q 011959 214 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG-F 292 (474)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g-~ 292 (474)
..|.. |+++|++.++++++++++|++..+++ .|.+.++ +++|.++|+++|.++++|-++.. .
T Consensus 609 ~~G~i-------------Dle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~---I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 609 QDGNI-------------DLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT---IQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred CCCCc-------------CHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc---HHHHHHHHHHcCCEEEEEecChhhC
Confidence 11211 89999999987666888888866555 4555432 89999999999999999999942 2
Q ss_pred ccCCCccccccCCCCceeeh--hhhcC-----CCcceEEEEecHHHHHhhcCCCCc----------c----cccCCCCCh
Q 011959 293 RLAYGGAQEYFGVTPDLTTL--GKIIG-----GGLPVGAYGGRRDIMEMVAPAGPM----------Y----QAGTLSGNP 351 (474)
Q Consensus 293 r~g~~~~~~~~g~~pdi~t~--sK~l~-----~G~~iG~~~~~~~i~~~~~~~~~~----------~----~~~t~~~~~ 351 (474)
......-....|++++ .|+|+ ||--+|.+.+++++...+-. ... . ..+.+.++.
T Consensus 672 ----~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg-~~v~~t~d~~greq~Iga~s~~~~g~a 746 (939)
T TIGR00461 672 ----VGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPK-HDVVSMITGIGGSKSIGSVSAAPYGSA 746 (939)
T ss_pred ----CCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCC-CcccccccCCCCccccccccccccCcH
Confidence 0001111234588766 59887 55668999999876554431 100 0 111233444
Q ss_pred HHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHH
Q 011959 352 LAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 428 (474)
Q Consensus 352 ~~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 428 (474)
+.+..+...|..+-.+++ .+....+.+|+.++|.+. +.+... ...+.+ .-+|.-+- .. .+........
T Consensus 747 ~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~---~~~l~~-~~~~~~-~hEfv~~~-~~---~~~~~g~~~~ 817 (939)
T TIGR00461 747 SILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH---YPILFV-GTLKHV-AHECILDL-RP---LKAKTGIEAI 817 (939)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc---Cccccc-CCCCce-eEEEEEec-cc---hhhhcCCCHH
Confidence 444555556666554433 344455778888888762 222211 011121 12221000 00 0001112347
Q ss_pred HHHHHHHHCCeEecccCCc---ce--EEecCCcHHHHHHHHHHHHHHHhh
Q 011959 429 RFYRGMLEEGVYFAPSQFE---AG--FTSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 429 ~~~~~l~~~Gv~v~~~~~~---~~--~~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
++.++|++.|+......++ .+ ++.-..|++|||++++++.++.++
T Consensus 818 dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e 867 (939)
T TIGR00461 818 DVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEE 867 (939)
T ss_pred HHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 8999999999975433211 22 335677999999999999877554
No 333
>PLN02590 probable tyrosine decarboxylase
Probab=99.49 E-value=3.4e-11 Score=123.55 Aligned_cols=312 Identities=10% Similarity=0.006 Sum_probs=177.9
Q ss_pred CCHHHHHHHHHHHhhCCCCC--------eEEEeCCHHHHHHHHHHHhHhhc-------C-CcEEEEEeCCCCCCchhHHH
Q 011959 137 PCLLENVLAEMVISAVPSIE--------MVRFVNSGTEACMGVLRLARAFT-------G-RERIIKFEGCYHGHADPFLV 200 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~--------~v~~~~sGseA~~~al~~ar~~~-------~-~~~ii~~~~~yhg~~~~~~~ 200 (474)
..+++.++.+++++.++-++ .-+|++|||+||..||..||... + ++-+++....-|-+..-++.
T Consensus 168 ~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 168 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred hHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH
Confidence 35788999999999985222 36789999999999999998742 1 23355555556766666666
Q ss_pred hcCCC---CccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC---CCCeEEEEEccccCCCCcccCCHHHHHHHHH
Q 011959 201 KAGSG---VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 274 (474)
Q Consensus 201 ~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~ 274 (474)
..|.+ +..++...... ..+ |+++|++.|++. +..+.+|+..--..++|.+-| +++|.+
T Consensus 248 ilGlg~~~vr~Vp~d~~~~---------~~m---d~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~ 311 (539)
T PLN02590 248 IGGIHEENIRLLKTDSSTN---------YGM---PPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGN 311 (539)
T ss_pred HcCCCcccEEEEeCCCCCC---------CcC---CHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHH
Confidence 65553 11111110000 011 899999998642 223455555555566899999 999999
Q ss_pred HHHHhCCEEEEeccccCc-ccCCCccccccCC-CCceee--hhhhcCCCcceEEEEecHH--HHHhhcCCCCcc------
Q 011959 275 ITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRRD--IMEMVAPAGPMY------ 342 (474)
Q Consensus 275 l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~-~pdi~t--~sK~l~~G~~iG~~~~~~~--i~~~~~~~~~~~------ 342 (474)
+|++||++|++|-+|.|+ ..-.....-..|+ ..|-++ .-|.+...+..|.++.+.. +.+.+.....+.
T Consensus 312 i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 312 IAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred HHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999999887 3221111112344 246665 5799988888999987753 333332110000
Q ss_pred -----ccc--CC-CCChHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcC-CeeEEeeeceeEEEEEec
Q 011959 343 -----QAG--TL-SGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTE 410 (474)
Q Consensus 343 -----~~~--t~-~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~ 410 (474)
... +. .+-.+.......+|+.+-.+ +.+++.-++.+++.+.|++. + +..-.+..=.++.|.+..
T Consensus 392 ~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~----~~fel~~~~~l~iVcFr~~~ 467 (539)
T PLN02590 392 KDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD----PSFEVVTTRYFSLVCFRLAP 467 (539)
T ss_pred cccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceEEEEEEecC
Confidence 000 01 11233444444556654443 34444555566666665542 2 111111111222222221
Q ss_pred CCCcCcccccccchHHHHHHHHHHHHCCeE-eccc---CCcceEE---ecCCcHHHHHHHHHHHHHHHhh
Q 011959 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVY-FAPS---QFEAGFT---SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~~~~~~~---~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.... .........++.+.+.+.|.+ +.+. +...+|+ +...++++|+.+++.|.+...+
T Consensus 468 ~~~~-----~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 468 VDGD-----EDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred CCCC-----HHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 1000 000123345777888877754 4433 2223454 4567899999999999987654
No 334
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.49 E-value=8.9e-12 Score=135.61 Aligned_cols=300 Identities=17% Similarity=0.182 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHhhCCCCCeE-EEeCCHHHHHHHHHHHhHhhc-----CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCC
Q 011959 139 LLENVLAEMVISAVPSIEMV-RFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (474)
Q Consensus 139 ~~~~~la~~l~~~~~~~~~v-~~~~sGseA~~~al~~ar~~~-----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (474)
+...++.++++++++ .+.+ +..|+|+.++.+++..+|.+. .++.+|+...+-|+.....+...|..+..++..
T Consensus 542 ~~i~e~q~~l~eltG-~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d 620 (954)
T PRK05367 542 ELIDQLEAWLAEITG-YDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACD 620 (954)
T ss_pred HHHHHHHHHHHHHHC-CCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCC
Confidence 456788899999884 4444 445678888878787777642 123455566677877766666656544332221
Q ss_pred CCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C
Q 011959 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G 291 (474)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g 291 (474)
. .+. -|+++|++.++++++++++|++......++...+ +++|.++|+++|+++++|.++. +
T Consensus 621 ~-~G~-------------iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 621 E-NGN-------------IDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred C-CCC-------------cCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEECcChhh
Confidence 1 111 1799999999865556777766554444444466 9999999999999999999994 2
Q ss_pred c-ccCCCccccccCCCCceeehh--hhcC-----CCcceEEEEecHHHHHhhcCCC---Cccc--ccCCCCChH----HH
Q 011959 292 F-RLAYGGAQEYFGVTPDLTTLG--KIIG-----GGLPVGAYGGRRDIMEMVAPAG---PMYQ--AGTLSGNPL----AM 354 (474)
Q Consensus 292 ~-r~g~~~~~~~~g~~pdi~t~s--K~l~-----~G~~iG~~~~~~~i~~~~~~~~---~~~~--~~t~~~~~~----~~ 354 (474)
+ ... ....+| .|+++++ |.|+ ||--+|.+.+++.+...+.... .... .++....+. .+
T Consensus 683 l~~l~---~pg~~G--ADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~ 757 (954)
T PRK05367 683 QVGLA---RPGDIG--ADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASIL 757 (954)
T ss_pred ccCCC---ChhhcC--CCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHH
Confidence 1 111 111233 5777655 9885 2345888888876654443210 0000 112222222 12
Q ss_pred HHHHHHHHHhcCCCHHHHHH---HHHHHHHHHHHHHhhhcCCeeEEeeecee--EEEEEecCCCcCcccccccchHHHHH
Q 011959 355 TAGIHTLKRLKEPGTYEYLN---KITGELTQGIIDAGKKAGHAICGGYISGM--FGFFFTEGPVYNFEDAKKSETTKFAR 429 (474)
Q Consensus 355 aaa~aal~~~~~~~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~v~~~g~~--~~i~~~~~~~~~~~~~~~~~~~~~~~ 429 (474)
..+...+..+-.+++.+..+ .+.+++.++|.+. +++...-++...+ +.+.+.. . ..........
T Consensus 758 ~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~---~~~~~~~~~~~~~~e~i~~~~~--~------~~~~g~~~~d 826 (954)
T PRK05367 758 PISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH---YPVLYTGANGRVAHECILDLRP--L------KESTGITVDD 826 (954)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh---cCccccCCCCCcccceEEEeec--c------cccCCCCHHH
Confidence 22233334343355555555 7888898888764 2221110000000 1122210 0 0000112367
Q ss_pred HHHHHHHCCeEecccC---CcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 430 FYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 430 ~~~~l~~~Gv~v~~~~---~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+.++|.+.|+...... .+.+++ .-..|++|||++++++..+.++
T Consensus 827 i~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 827 IAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred HHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 8999999998765432 233444 4567999999999999887654
No 335
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.46 E-value=2.9e-11 Score=119.60 Aligned_cols=306 Identities=12% Similarity=0.032 Sum_probs=179.1
Q ss_pred CCHHHHHHHHHHHHhc--CCC-----C-CCC---HHHHHHHHHHHhhCCC--CCeEE-EeCCHHHHHHHHHHHhHhhcCC
Q 011959 116 ADDQVLAALGETMKKG--TSF-----G-APC---LLENVLAEMVISAVPS--IEMVR-FVNSGTEACMGVLRLARAFTGR 181 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~--~~~-----~-~~~---~~~~~la~~l~~~~~~--~~~v~-~~~sGseA~~~al~~ar~~~~~ 181 (474)
-+++|++|+...+.+. ... + ... +...+..+.+++.+.. ..+++ +.+||+.|+|+++.. ....+
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~n--l~~~g 91 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMN--LLGGG 91 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHh--cCCCC
Confidence 4799999999887431 001 1 122 5677888888888862 23454 558899999999984 33445
Q ss_pred cEEEEEeCCCCCCchhHHHhc-CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHH-HHhcCCCCeEEEEEccccCCC
Q 011959 182 ERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN-LFENNKGEIAAIILEPVVGNS 259 (474)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~-~l~~~~~~~a~vi~ep~~~~~ 259 (474)
++++....+.+|....-++.. |.. .....+...+. .+..++++ .+++ ++++|.+..+.+.+
T Consensus 92 ~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-------------~~~~~~~~~~l~~---~~~~V~~th~eTst 154 (360)
T PRK05355 92 KKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-------------TYIPPLDEWQLSD---DAAYVHYTSNETID 154 (360)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-------------CCCCChhhccCCC---CCCEEEEccCCCcc
Confidence 677777777777655433332 321 11111110111 02233333 4542 56788888888889
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceee--hhhhcCCCcceEEEEecHHHHHhhcC
Q 011959 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRRDIMEMVAP 337 (474)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t--~sK~l~~G~~iG~~~~~~~i~~~~~~ 337 (474)
|.+.++ +.+| ||+++|+|-+++ + .+.....+.+ |+++ ..|.+|. ..+|.+++++++++.+.+
T Consensus 155 Gv~~~~---i~~i------~g~l~vVDavss-~-g~~~idv~~~----d~~~~ssqK~lgP-~Glg~l~~s~~~l~~~~~ 218 (360)
T PRK05355 155 GTEFHE---LPDT------GDVPLVADMSSD-I-LSRPIDVSKF----GLIYAGAQKNIGP-AGLTIVIVREDLLGRALP 218 (360)
T ss_pred eEecCc---cccc------CCCcEEEEcCcc-c-cCccCCHHHc----cEEEEeccccccC-CceEEEEECHHHHhhccc
Confidence 988731 5444 899999999995 1 1112222222 3554 4599962 239999999999888764
Q ss_pred C-CCc-------cccc-CCCCChHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCeeE-Ee---ee
Q 011959 338 A-GPM-------YQAG-TLSGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAIC-GG---YI 400 (474)
Q Consensus 338 ~-~~~-------~~~~-t~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-v~---~~ 400 (474)
. ..+ .... .++.|.....+..++|+.+.+. ...++.+++.+++++.|+++ ++... .. ..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~----~~~~~~~~~~~rs 294 (360)
T PRK05355 219 SIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSS----DFYRNPVAPEDRS 294 (360)
T ss_pred CCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC----CCcccCCChhhcC
Confidence 1 100 0111 2344556666777889988764 34444555555555555554 32110 00 11
Q ss_pred ceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--CcceEEec--CCcHHHHHHHHHHHHHHHhh
Q 011959 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTSL--AHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~~~~--~~t~e~i~~~l~~l~~~~~~ 473 (474)
+..+.|.+ ++.....++...+.++|+++..+. .+.+|+++ ..|.+|||++++.|+++++.
T Consensus 295 ~~v~sf~~-------------~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 295 RMNVPFTL-------------ADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CcEEEEEc-------------CChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 12233332 222223567678889999985543 24578864 45799999999999998753
No 336
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.46 E-value=1e-11 Score=117.48 Aligned_cols=275 Identities=16% Similarity=0.126 Sum_probs=163.2
Q ss_pred EEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHH
Q 011959 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~ 238 (474)
+-+.|||-|+..+.+....+.++..|.+.++++.- +.......|..+...++-+... .. -|++.+-.
T Consensus 98 ~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~N-H~~If~~aGl~v~~Y~Yyd~~~---------~~---~df~~mla 164 (396)
T COG1448 98 VQTLGGTGALRVAADFLARFFPDATVWISDPTWPN-HKAIFEAAGLEVETYPYYDAET---------KG---LDFDGMLA 164 (396)
T ss_pred eecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHh-HHHHHHhcCCceeeeecccccc---------cc---ccHHHHHH
Confidence 45789999999999977777777888888888744 4445555555444322211111 00 16777777
Q ss_pred HHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCcccccc------CCCCce-e-
Q 011959 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF------GVTPDL-T- 310 (474)
Q Consensus 239 ~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~------g~~pdi-~- 310 (474)
.|++.+.....++-.+.+|++|.- ++.+.|++|.++.++.+.+-++|=+|-||..| ...+.+ ...+.+ +
T Consensus 165 ~L~~a~~~~vvLLH~CcHNPTG~D-~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G--leeDa~~lR~~a~~~~~~lva 241 (396)
T COG1448 165 DLKTAPEGSVVLLHGCCHNPTGID-PTEEQWQELADLIKERGLIPFFDIAYQGFADG--LEEDAYALRLFAEVGPELLVA 241 (396)
T ss_pred HHHhCCCCCEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCCeeeeehhhhhhccc--hHHHHHHHHHHHHhCCcEEEE
Confidence 777655444444445566777755 45555999999999999999999999998333 111111 123333 3
Q ss_pred -ehhhhcC-CCcceEEEE-e--cHHHHHhhcCCCCcccccCCCCChHHHH-HHHHHHHH--h-----cC-CCHHHHHHHH
Q 011959 311 -TLGKIIG-GGLPVGAYG-G--RRDIMEMVAPAGPMYQAGTLSGNPLAMT-AGIHTLKR--L-----KE-PGTYEYLNKI 376 (474)
Q Consensus 311 -t~sK~l~-~G~~iG~~~-~--~~~i~~~~~~~~~~~~~~t~~~~~~~~a-aa~aal~~--~-----~~-~~~~~~~~~~ 376 (474)
+|||.|| =|-|+|++. . +++..+.+...-+...-++||.+|---+ .....|+. + .+ +++++++.++
T Consensus 242 ~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~m 321 (396)
T COG1448 242 SSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEM 321 (396)
T ss_pred ehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999 588999972 2 3344443321101223346665543322 22222211 1 11 4566667777
Q ss_pred HHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEe-cCC
Q 011959 377 TGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS-LAH 455 (474)
Q Consensus 377 ~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~-~~~ 455 (474)
+..|.+.|++......+..-....|+|...=+. .+.+.+..-+.||++..+| |++ ...
T Consensus 322 R~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls-----------------~~QV~rLree~~IY~v~sG----Ri~vaGl 380 (396)
T COG1448 322 RQALVDALKALGAPRNFDFIISQRGMFSYTGLS-----------------PEQVDRLREEFGIYLVASG----RINVAGL 380 (396)
T ss_pred HHHHHHHHHhhCCCcccchHhhcCceeecCCCC-----------------HHHHHHHHHhccEEEecCC----eeeeccC
Confidence 777777777654433322223344443211110 1334334346799998876 665 466
Q ss_pred cHHHHHHHHHHHHHH
Q 011959 456 SSDDIQHTITAAEKV 470 (474)
Q Consensus 456 t~e~i~~~l~~l~~~ 470 (474)
++..|+.+++.|.++
T Consensus 381 ~~~ni~~va~ai~~v 395 (396)
T COG1448 381 NTSNIDYVAKAIAAV 395 (396)
T ss_pred ChhhHHHHHHHHHhh
Confidence 999999999998875
No 337
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.44 E-value=4.7e-11 Score=122.66 Aligned_cols=307 Identities=16% Similarity=0.077 Sum_probs=169.5
Q ss_pred CCHHHHHHHHHHHhhCCC--------------CCeEEEeCCHHHHHHHHHHHhHhhcC----------------------
Q 011959 137 PCLLENVLAEMVISAVPS--------------IEMVRFVNSGTEACMGVLRLARAFTG---------------------- 180 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~--------------~~~v~~~~sGseA~~~al~~ar~~~~---------------------- 180 (474)
.++++.++.+++++.+.+ ...-.|++|||+||..|+..||...-
T Consensus 127 ~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~ 206 (522)
T TIGR03799 127 FTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYG 206 (522)
T ss_pred hHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhcc
Confidence 357888899999887621 12357899999999999999986420
Q ss_pred -CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC-----CHHHHHHHHhc---CCCCeEEEE
Q 011959 181 -RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFEN---NKGEIAAII 251 (474)
Q Consensus 181 -~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~---~~~~~a~vi 251 (474)
++.+|+....-|.+..-+....|.+.. ++..+|.+ |+++|++.|++ .+..+.+|+
T Consensus 207 ~~~~~v~~S~~~H~S~~kaa~~lglg~~----------------~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vv 270 (522)
T TIGR03799 207 YDGLAILVSERGHYSLGKAADVLGIGRD----------------NLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIV 270 (522)
T ss_pred CCceEEEECCCchHHHHHHHHHcCCCcc----------------cEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEE
Confidence 123555555566655544444443210 11222211 79999998863 222334444
Q ss_pred EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCC-CCceeeh--hhhcCCCcceEEEEe
Q 011959 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTTL--GKIIGGGLPVGAYGG 327 (474)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~-~pdi~t~--sK~l~~G~~iG~~~~ 327 (474)
......++|.+.| +++|.++|++||+++++|-+|.|. .....+....-|+ ..|.+++ -|.+.+.+.+|.++.
T Consensus 271 ataGtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llv 346 (522)
T TIGR03799 271 GVAGTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLF 346 (522)
T ss_pred EEecCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEE
Confidence 4444557899999 999999999999999999999765 2111010112344 5687765 488876677999977
Q ss_pred c-HHHHHhhcCCCCcc------c--ccCCCCChHHH-HHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCe
Q 011959 328 R-RDIMEMVAPAGPMY------Q--AGTLSGNPLAM-TAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHA 394 (474)
Q Consensus 328 ~-~~i~~~~~~~~~~~------~--~~t~~~~~~~~-aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (474)
+ ++..+.+.....+. . ..++.++.... ....++|+.+.. +.+.++..++.+++.+.|++.. ++.
T Consensus 347 r~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~---~~e 423 (522)
T TIGR03799 347 KDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQP---DFE 423 (522)
T ss_pred eCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCC---CeE
Confidence 5 45555554311110 0 01122222222 234566766654 4555566666666666665431 121
Q ss_pred eEEeeeceeEEEEEecCCCcCcccc-----ccc----chHHHHHHHHHHHHCCeEecc-c-----C---C--cceEE---
Q 011959 395 ICGGYISGMFGFFFTEGPVYNFEDA-----KKS----ETTKFARFYRGMLEEGVYFAP-S-----Q---F--EAGFT--- 451 (474)
Q Consensus 395 ~~v~~~g~~~~i~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~l~~~Gv~v~~-~-----~---~--~~~~~--- 451 (474)
...+..-.++.|.+........... ... .......+.+.+.+.|..+.. . . . ..+|+
T Consensus 424 l~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~ 503 (522)
T TIGR03799 424 LVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLA 503 (522)
T ss_pred EecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEec
Confidence 1112222233444322211110000 000 122335677777778854332 1 1 1 12344
Q ss_pred ecCCcHHHHHHHHHH
Q 011959 452 SLAHSSDDIQHTITA 466 (474)
Q Consensus 452 ~~~~t~e~i~~~l~~ 466 (474)
+...|+++|+.+++.
T Consensus 504 np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 504 NPLTTHEILQDILDE 518 (522)
T ss_pred CCCCCHHHHHHHHHH
Confidence 456789999987764
No 338
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.44 E-value=8.9e-11 Score=115.59 Aligned_cols=307 Identities=14% Similarity=0.046 Sum_probs=178.3
Q ss_pred CHHHHHHHHHHHHhcC--CCC------CCC---HHHHHHHHHHHhhCCC--CCeEEEe-CCHHHHHHHHHHHhHhhcCCc
Q 011959 117 DDQVLAALGETMKKGT--SFG------APC---LLENVLAEMVISAVPS--IEMVRFV-NSGTEACMGVLRLARAFTGRE 182 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~--~~~------~~~---~~~~~la~~l~~~~~~--~~~v~~~-~sGseA~~~al~~ar~~~~~~ 182 (474)
+..|++++.+.+.+.. +.+ ... +...++.+.+.+.+.. ..+|+|+ +|||+|+++++.. ...+.+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~n--l~~~~~ 81 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLN--LLAEGK 81 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHh--cCCCCC
Confidence 5688899988887421 111 112 5566778888888752 3467776 5599999999984 223567
Q ss_pred EEEEEeCCCCCCchhHHHhc-CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCc
Q 011959 183 RIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 261 (474)
Q Consensus 183 ~ii~~~~~yhg~~~~~~~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~ 261 (474)
++++...+.+|....-++.. |. +....... ..++.+..++++.... .++++|.+..+.+.+|.
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~-------------~~~~~~~~~~~~~~~~--~~~~~v~~th~ETstGv 145 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGK-------------EGNYTKIPDPSTWEIS--EDAAYVHYCANETIHGV 145 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccc-------------cCCCCCCCCHHhcCCC--CCCCEEEEcCCCCcccE
Confidence 77887777777655444332 33 22111100 0122233333322221 36778888887788888
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhcCCCcceEEEEecHHHHHhhcCCC
Q 011959 262 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAG 339 (474)
Q Consensus 262 i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~ 339 (474)
..+ ++++.+++++|+|-+++ + .+.....+.+ |++ +..|+||+ ..+|.++.++++++.+.+..
T Consensus 146 ~~~---------~l~~~~~~l~iVDavss-~-g~~~id~~~~----d~~~~ssqK~lgP-~Glg~l~~s~~~~~~~~~~~ 209 (349)
T TIGR01364 146 EFR---------ELPDVKNAPLVADMSSN-I-LSRPIDVSKF----GLIYAGAQKNIGP-AGLTVVIVRKDLLGRASRIT 209 (349)
T ss_pred ecc---------eecccCCCeEEEEcccc-c-cCccCCHHHc----cEEEEecccccCC-CceEEEEECHHHHhhcccCC
Confidence 765 66777899999999995 1 1112222222 344 45699972 23999999999988765421
Q ss_pred C-cc-------cccCC-CCChHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCeeE-E--eeec-e
Q 011959 340 P-MY-------QAGTL-SGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAIC-G--GYIS-G 402 (474)
Q Consensus 340 ~-~~-------~~~t~-~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-v--~~~g-~ 402 (474)
+ .. ...++ +.|.....+..++|+.+.+. ...++.+++.+++++.|+++. ++... . .... .
T Consensus 210 ~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~---gl~~~~~~~~~rs~~ 286 (349)
T TIGR01364 210 PSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSN---GFYRNPVDPRNRSRM 286 (349)
T ss_pred CCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC---CeeccCCCHHHcCCe
Confidence 1 00 01223 44556666666889888654 334444555555555555541 12111 0 0111 2
Q ss_pred eEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--CcceEEec--CCcHHHHHHHHHHHHHHHhh
Q 011959 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTSL--AHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~~~~--~~t~e~i~~~l~~l~~~~~~ 473 (474)
.+.+.+.+ .....++...+.++|+.+.++. ...+|+++ ..|+||||.++++|+++.++
T Consensus 287 v~sf~~~~-------------~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 287 NVVFTLGN-------------EELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred EEEEecCC-------------hhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 23333221 1112566678889999665553 24678764 55899999999999998764
No 339
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.43 E-value=6.1e-11 Score=126.31 Aligned_cols=296 Identities=12% Similarity=0.109 Sum_probs=170.0
Q ss_pred HHHHHHHHHHhhCCCCCeEEEe-CCHHHHHHHHHHHhHhh------cCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCC
Q 011959 140 LENVLAEMVISAVPSIEMVRFV-NSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (474)
Q Consensus 140 ~~~~la~~l~~~~~~~~~v~~~-~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (474)
...+|.+++++++ +.+.+-+- +||+.+..+++...|.| ++|++ ++...+-|+.........|..+..++..
T Consensus 544 ~i~elq~~l~eLt-Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~-vLIp~saHgtNpasa~~~GieVv~Vp~D 621 (954)
T PRK12566 544 MIDELEAWLCAIT-GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDI-CLIPSSAHGTNPASAQMAGMRVVIVECD 621 (954)
T ss_pred HHHHHHHHHHHHH-CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCE-EEecccccccCHHHHHHCCCEEEEeccC
Confidence 3457778888888 66655544 58998888888877765 34444 4455577776655555555443332221
Q ss_pred CCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C
Q 011959 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G 291 (474)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g 291 (474)
..|.. |+++|++.++++.+++++|++..+++.++...+ +++|.++|+++|+++++|-++. +
T Consensus 622 -~~G~i-------------Dle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vDgA~~~a 683 (954)
T PRK12566 622 -PDGNV-------------DLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMDGANLNA 683 (954)
T ss_pred -CCCCc-------------CHHHHHHHhhccCCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEEeeChhh
Confidence 12211 899999999866678888888766554544334 9999999999999999999884 2
Q ss_pred cccCCCccccccCCCCceeehh--hhcC-----CCcceEEEEecHHHHHhhcCCC------C-cccc---cCCCCChHHH
Q 011959 292 FRLAYGGAQEYFGVTPDLTTLG--KIIG-----GGLPVGAYGGRRDIMEMVAPAG------P-MYQA---GTLSGNPLAM 354 (474)
Q Consensus 292 ~r~g~~~~~~~~g~~pdi~t~s--K~l~-----~G~~iG~~~~~~~i~~~~~~~~------~-~~~~---~t~~~~~~~~ 354 (474)
. ...-.... +..|+++++ |+|+ ||.-+|.+..++++...+.... . .... ....++.+..
T Consensus 684 ~--~~l~~Pg~--~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l 759 (954)
T PRK12566 684 Q--VGLARPAD--IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASIL 759 (954)
T ss_pred c--cCCCChhh--cCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHH
Confidence 1 11111122 345777654 9885 2344777777776665554210 0 1011 1122233333
Q ss_pred HHHHHHHHHhcCCCHHHHHH----HHHHHHHHHHHHHhhhcCCeeEEeeece---eEEEEEecCCCcCcccccccchHHH
Q 011959 355 TAGIHTLKRLKEPGTYEYLN----KITGELTQGIIDAGKKAGHAICGGYISG---MFGFFFTEGPVYNFEDAKKSETTKF 427 (474)
Q Consensus 355 aaa~aal~~~~~~~~~~~~~----~~~~~l~~~L~~~~~~~~~~~~v~~~g~---~~~i~~~~~~~~~~~~~~~~~~~~~ 427 (474)
.++..-++.+-.+ +.+.. .+.+|++++|.+. +++... ...+. -+.+.+.. ... ......
T Consensus 760 ~~A~~Yi~~lG~e--Lk~aa~~ailnAnYla~rL~~~---~~v~~~-~~~~~~~hEfii~~~~--l~~------~~g~~~ 825 (954)
T PRK12566 760 PISWMYIAMMGPQ--LADASEVAILSANYLANQLGGA---FPVLYR-GRNERVAHECILDLRP--LKA------QTGISE 825 (954)
T ss_pred HHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHhHhh---CCCCcC-CCCCCeeeEEEEEccc--ccc------ccCCCH
Confidence 4444444443323 33333 4677888888662 333321 11111 12222210 000 001122
Q ss_pred HHHHHHHHHCCeEecccC---CcceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 428 ARFYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 428 ~~~~~~l~~~Gv~v~~~~---~~~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
..+.++|++.|+...... .+.+++ .-..+++|||+++++|+.+.++
T Consensus 826 ~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 826 EDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred HHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 568888999988754321 234455 4567999999999999888765
No 340
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.43 E-value=2.5e-11 Score=120.23 Aligned_cols=311 Identities=14% Similarity=0.054 Sum_probs=168.7
Q ss_pred CCHHHHHHHHHHHHhcCCCC-----CC------CHHHHHHHHHHHhhCC--CCCeEEEeCC-HHHHHHHHHHHhHhhcCC
Q 011959 116 ADDQVLAALGETMKKGTSFG-----AP------CLLENVLAEMVISAVP--SIEMVRFVNS-GTEACMGVLRLARAFTGR 181 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~~-----~~------~~~~~~la~~l~~~~~--~~~~v~~~~s-GseA~~~al~~ar~~~~~ 181 (474)
-++.|++|+.+.+.+..+.+ .. .+...+..+.+++++. ..+.|+|++| ||+|++.++.....-.++
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~ 89 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGT 89 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe
Confidence 47899999999885421111 11 1556778888888886 3467888866 999999999842100113
Q ss_pred cEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCC-HHHHHHHHhcCCCCeEEEEEccccCCCC
Q 011959 182 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND-VSALENLFENNKGEIAAIILEPVVGNSG 260 (474)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d-~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (474)
..+|+. +.|.-+........|..+..+..+. .+ .+.+ .+..+..+. +++++|.+..+.+.+|
T Consensus 90 ~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~-~g------------~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG 152 (355)
T cd00611 90 ADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKE-EG------------KYTKIPDVETWDLA---PDAAYVHYCSNETIHG 152 (355)
T ss_pred EEEEEC-CHHHHHHHHHHHhcCCCcEEEeccc-cc------------CCCCCCCHhhcCCC---CCCCEEEEeCCccccc
Confidence 333433 3332111111122232221111110 00 0112 111112222 3677888888777788
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehhhhcCCCcceEEEEecHHHHHhhcCCCC
Q 011959 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 340 (474)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~ 340 (474)
.+.+ ++++.||+++++|-+++- .+.....+.+++ ++.+--|.+| ...+|.+++++++.+.+.+..+
T Consensus 153 ~~~~---------~i~~~~g~~~~VDa~qs~--g~~~idv~~~~~--~~ss~~K~lG-P~G~g~l~~~~~~~~~~~~~~~ 218 (355)
T cd00611 153 VEFD---------EVPDTGGVPLVADMSSNI--LSRPIDVSKFGV--IYAGAQKNLG-PAGVTVVIVRKDLLGKARKITP 218 (355)
T ss_pred EEcc---------eecccCCCeEEEEccccc--cCCCCCHHHhCE--EEeecccccC-CCceEEEEECHHHHhhcccCCC
Confidence 8643 455669999999999961 111222233332 3333569886 2239999999998877653211
Q ss_pred -cc-------cccCC-CCChHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeec-eeEEE
Q 011959 341 -MY-------QAGTL-SGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS-GMFGF 406 (474)
Q Consensus 341 -~~-------~~~t~-~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g-~~~~i 406 (474)
.. ...++ +.|..+..+..++|+.+.+. ...++.+++.+++++.|+++-.-+....+..... ..+.|
T Consensus 219 ~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf 298 (355)
T cd00611 219 SMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPF 298 (355)
T ss_pred CcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEE
Confidence 11 01112 34555667777889887654 3345555666666666665410000010000111 23444
Q ss_pred EEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--CcceEEecCC--cHHHHHHHHHHHHHH
Q 011959 407 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTSLAH--SSDDIQHTITAAEKV 470 (474)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~~~~~~--t~e~i~~~l~~l~~~ 470 (474)
.+.. ......+...+.++|+.+.++. .+.+|+++.+ |+||||++++.|+++
T Consensus 299 ~~~~-------------~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 299 RLGK-------------EELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred EcCC-------------hhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 4321 0111455568889999844442 2467887555 999999999999885
No 341
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.42 E-value=1.9e-11 Score=121.14 Aligned_cols=309 Identities=12% Similarity=-0.015 Sum_probs=171.5
Q ss_pred CHHHHHHHHHHHHhcC--CCC--CCCHHHHHHHHHHHhhCCC--CCeEEEe-CCHHHHHHHHHHHhHhhcCCcEEEEEeC
Q 011959 117 DDQVLAALGETMKKGT--SFG--APCLLENVLAEMVISAVPS--IEMVRFV-NSGTEACMGVLRLARAFTGRERIIKFEG 189 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~--~~~--~~~~~~~~la~~l~~~~~~--~~~v~~~-~sGseA~~~al~~ar~~~~~~~ii~~~~ 189 (474)
+|+|++++..+..... ++. ...+...+..+.+++++.. ..+|+|+ +|||.+++.++.. +..+ +.+....
T Consensus 15 ~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~---l~~~-~~l~i~~ 90 (361)
T TIGR01366 15 RLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFG---LIEK-KSLHLSF 90 (361)
T ss_pred CHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHh---cccc-cccEEec
Confidence 7888888775421111 111 1245566777778877752 3368875 7799999999983 3322 3333334
Q ss_pred CCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHH
Q 011959 190 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 269 (474)
Q Consensus 190 ~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l 269 (474)
+.||....-.+... |.. + ....+.++++ +.++..+ .+++++|.+..+.+.+|.+.| +
T Consensus 91 G~~~~~~~~~a~~~--------~~~-~-----~~~~~~~~~~--~~~~~~~---~~~~~lV~~~h~et~tG~~~p----i 147 (361)
T TIGR01366 91 GEFSSKFAKAVKLA--------PWL-G-----EPIIVTADPG--SAPEPQA---DPGVDVIAWAHNETSTGVAVP----V 147 (361)
T ss_pred CHHHHHHHHHHHhh--------hcc-C-----CceEEecCCC--CCCCCcc---CCCCCEEEEcccCCccceecc----c
Confidence 55553333322211 000 0 0012222221 1122112 246889999999899999999 5
Q ss_pred HHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeeh--hhhcCCCcceEEEEecHHHHHhhcCCC---C---c
Q 011959 270 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVAPAG---P---M 341 (474)
Q Consensus 270 ~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~--sK~l~~G~~iG~~~~~~~i~~~~~~~~---~---~ 341 (474)
++| ++++|+++|+|-+++ + .+.....+ . .|++++ .|++++---++.++.++++++.+.+.. . .
T Consensus 148 ~~I---~~~~g~~~iVDavqs-~-g~~~idv~--~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~ 218 (361)
T TIGR01366 148 RRP---EGSDDALVVIDATSG-A-GGLPVDIA--E--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPE 218 (361)
T ss_pred ccc---cccCCCeEEEEcCcc-c-cCCCCCHH--H--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCch
Confidence 444 689999999999996 1 11111122 1 477654 599983112556677998887765210 0 0
Q ss_pred c-----------cccCCCCChHH-HHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEe-eeceeE
Q 011959 342 Y-----------QAGTLSGNPLA-MTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMF 404 (474)
Q Consensus 342 ~-----------~~~t~~~~~~~-~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~~ 404 (474)
+ ...|.+.+++. ..+..++++.+.+. ...++.+++.+++++.|.+...-........ ......
T Consensus 219 ~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~ 298 (361)
T TIGR01366 219 FLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVG 298 (361)
T ss_pred hhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceE
Confidence 1 02344444444 33556788877653 2335555666666666666531111110000 001111
Q ss_pred EEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC----CcceEEe--cCCcHHHHHHHHHHHHHHHhhC
Q 011959 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVLRQI 474 (474)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~~~--~~~t~e~i~~~l~~l~~~~~~~ 474 (474)
.+.|. +......+.+.|.++||.+.++. ...+|++ ...|++|+++++++|+++++++
T Consensus 299 ~v~~~-------------~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 299 TIDFV-------------DDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred EEECC-------------CccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 22221 11223567888888999987652 2346775 4569999999999999998875
No 342
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.41 E-value=3.8e-10 Score=122.85 Aligned_cols=342 Identities=14% Similarity=0.107 Sum_probs=188.4
Q ss_pred CEEEeccCChhhccCCCCCH-HHHHHHHHHHHhc--CCCC-C-----CCHHHHHHHHHHHhhCC-CC-C-eEEEeCCHHH
Q 011959 99 NEYIDYVGSWGPAIIGHADD-QVLAALGETMKKG--TSFG-A-----PCLLENVLAEMVISAVP-SI-E-MVRFVNSGTE 166 (474)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p-~v~~a~~~~~~~~--~~~~-~-----~~~~~~~la~~l~~~~~-~~-~-~v~~~~sGse 166 (474)
..|+|..+. . ..+| .|.+++.+.+... ...+ + ..+...+..+.++++++ .. + .|+||+|+|+
T Consensus 35 ~iYLD~Aat---t---~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGA---T---LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCC---C---CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 578887754 1 2244 4455454544431 1111 1 13456677788888886 23 3 5899999999
Q ss_pred HHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHh---cCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHh--
Q 011959 167 ACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK---AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE-- 241 (474)
Q Consensus 167 A~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~---~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~-- 241 (474)
|+..+.... .+..++.||+ ...-|......... .|..+..++.+...+.+..... .+.. +.++|++.++
T Consensus 109 alnlva~~l-~~~~gd~Iv~-t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g-~~~~---~~~~l~~~~~~~ 182 (805)
T PLN02724 109 ALKLVGETF-PWSSESHFCY-TLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQG-SVVV---KSRGLQRRNTSK 182 (805)
T ss_pred HHHHHHHHC-CCCCCCeEEE-eeccccchHHHHHHHHHcCCeEEeccchhcccccccccc-cccc---chhhhhhhhhhh
Confidence 999887632 1344566666 44555554444322 1322222111100000000000 0000 1244555431
Q ss_pred --c---CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHh--------CCEEEEeccccCcccCCCccccccCCCCc
Q 011959 242 --N---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN--------GALLIFDEVMTGFRLAYGGAQEYFGVTPD 308 (474)
Q Consensus 242 --~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~--------g~llI~DEv~~g~r~g~~~~~~~~g~~pd 308 (474)
. ..+++++|.+..+.|.+|.+.| ++.+..+++.. ++++++|-+|+ .|. ...+.-.+.+|
T Consensus 183 l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~---~g~-~piDv~~~~~D 254 (805)
T PLN02724 183 LQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG---CGT-SPPDLSRYPAD 254 (805)
T ss_pred hccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh---cCC-CCCChhhcCCC
Confidence 1 1235578888888888999999 76665544432 36899999995 111 11222234578
Q ss_pred eeehh--hhcCCCcceEEEEecHHHHHhhcCCCCccccc-----------------------CCCCChHHHHHHHHHHHH
Q 011959 309 LTTLG--KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG-----------------------TLSGNPLAMTAGIHTLKR 363 (474)
Q Consensus 309 i~t~s--K~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~-----------------------t~~~~~~~~aaa~aal~~ 363 (474)
.+++| |.+|+...+|++++++++++.+.+. .+.++ .-+.|..++++..++|+.
T Consensus 255 fl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~--~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~ 332 (805)
T PLN02724 255 FVVVSFYKIFGYPTGLGALLVRRDAAKLLKKK--YFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKL 332 (805)
T ss_pred EEEEecceeccCCCCceEEEEehhhhhhhcCC--ccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHH
Confidence 87654 9887434599999999988776631 11110 113456677777788887
Q ss_pred hcC---CCHHHHHHHHHHHHHHHHHHHhhhcC---CeeE--------EeeeceeEEEEEecCCCcCcccccccchHHHHH
Q 011959 364 LKE---PGTYEYLNKITGELTQGIIDAGKKAG---HAIC--------GGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 429 (474)
Q Consensus 364 ~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~---~~~~--------v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 429 (474)
+.+ +...++..++.+++.+.|.++....+ +... ....+.++.|.+...+...+ ....
T Consensus 333 l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v---------~~~~ 403 (805)
T PLN02724 333 LNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWV---------GHRE 403 (805)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEe---------CHHH
Confidence 765 55677788888888888877631111 1110 01245666776654321111 0122
Q ss_pred HHHHHHHCCeEecccCC---------------------------------------cceEEe--cCCcHHHHHHHHHHHH
Q 011959 430 FYRGMLEEGVYFAPSQF---------------------------------------EAGFTS--LAHSSDDIQHTITAAE 468 (474)
Q Consensus 430 ~~~~l~~~Gv~v~~~~~---------------------------------------~~~~~~--~~~t~e~i~~~l~~l~ 468 (474)
+...+.++||.++.+.. +.+|++ ...|.+|||++++.|+
T Consensus 404 v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~ 483 (805)
T PLN02724 404 VEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFII 483 (805)
T ss_pred HHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHH
Confidence 33333455776644311 235665 4559999999999999
Q ss_pred HHH
Q 011959 469 KVL 471 (474)
Q Consensus 469 ~~~ 471 (474)
+.+
T Consensus 484 ~~~ 486 (805)
T PLN02724 484 SSF 486 (805)
T ss_pred HHh
Confidence 865
No 343
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.40 E-value=3.2e-13 Score=128.56 Aligned_cols=197 Identities=21% Similarity=0.188 Sum_probs=120.3
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCC--
Q 011959 116 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG-- 193 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg-- 193 (474)
.+|++.+++.+.. .+...++.++...+|.+++++.+ +.+.++|+.||+.||..+++. ++.+..-++.....|-
T Consensus 7 ~~~~m~~a~~~a~-~gd~~Yg~D~~~~~l~~~i~~l~-g~e~a~f~~sGT~An~~al~~---~~~~~~~vi~~~~aHi~~ 81 (290)
T PF01212_consen 7 PTPAMLEAMAAAN-VGDDAYGEDPTTARLEERIAELF-GKEAALFVPSGTMANQLALRA---HLRPGESVICADTAHIHF 81 (290)
T ss_dssp S-HHEEHHHHHTT-SB-CCTTSSHHHHHHHHHHHHHH-TSSEEEEESSHHHHHHHHHHH---HHHTTEEEEEETTEHHHH
T ss_pred CCHHHHHHHHccc-cCCcccCCChhHHHHHHHHHHHc-CCCEEEEeCCCChHHHHHHHH---HHhcCCceeccccceeee
Confidence 7899999995443 33323345778889999999988 678889999999999999994 4444444444433333
Q ss_pred CchhHH-HhcCCCCccCCCCCCC-CCCCCCCCceEEccCCCHHHHHHHHhc---CCCCeEEEEEccccCC-CCcccCCHH
Q 011959 194 HADPFL-VKAGSGVATLGLPDSP-GVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGN-SGFIAPKPD 267 (474)
Q Consensus 194 ~~~~~~-~~~g~~~~~~~~~~~~-g~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~-~G~i~~~~~ 267 (474)
+..++. ..+|..+..+ +... |.. |+++|++.+.. |..++++|.+|...+. +|.+.+ .+
T Consensus 82 ~E~ga~~~~~G~~~~~l--~~~~~G~l-------------~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s-~~ 145 (290)
T PF01212_consen 82 DETGAIEELSGAKLIPL--PSDDDGKL-------------TPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYS-LE 145 (290)
T ss_dssp SSTTHHHHHTTCEEEEE--BECTGTBB--------------HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB----HH
T ss_pred eccchhhHhcCcEEEEC--CCcccCCC-------------CHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCC-HH
Confidence 233333 3344433221 2122 211 79999999986 4457899999887776 455555 55
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCcee--ehhhhcCCCcceEEE-EecHHHHHhh
Q 011959 268 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRRDIMEMV 335 (474)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~-~~~~~i~~~~ 335 (474)
.+++|.++|++||+.|+.|-+-..- -.........+--..|++ +++|.++ .+.|++ ++++++++..
T Consensus 146 el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g--~~~Gavl~~~~~~i~~~ 215 (290)
T PF01212_consen 146 ELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGG--APGGAVLAGNKEFIAKA 215 (290)
T ss_dssp HHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT---SSSEEEEEESHHHHHHH
T ss_pred HHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccc--cccceEEEechHHHHHH
Confidence 5999999999999999999664200 000000111111235766 4667654 467776 7888865543
No 344
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.40 E-value=7.9e-11 Score=105.72 Aligned_cols=293 Identities=18% Similarity=0.198 Sum_probs=180.5
Q ss_pred HHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCC
Q 011959 142 NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGA 221 (474)
Q Consensus 142 ~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~ 221 (474)
.+|++.| +.|.+.+|++.-+|-.+++. ++.++++.++.|+.-|-.+..+....|..+..++ ..+.|
T Consensus 68 ~dlaeFl-----g~D~~R~t~GARe~KfavMh---al~~~gd~vV~D~~aHYttyvAAEragl~v~eVp---~tg~P--- 133 (382)
T COG1103 68 EDLAEFL-----GMDEVRVTAGAREAKFAVMH---ALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVP---NTGYP--- 133 (382)
T ss_pred HHHHHHh-----CCceeeecccchhhHHHHHH---HhccCCCEEEEcCcchHHHHHHHHhcCCeEEecC---CCCCC---
Confidence 3455555 89999999999999999998 7888999999999999888777777787665433 22222
Q ss_pred CCceEEccCCCHHH----HHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCC
Q 011959 222 TYETLTAPFNDVSA----LENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 297 (474)
Q Consensus 222 ~~~~~~~~~~d~~~----le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~ 297 (474)
.+.+ +++. +++..++.++.+++.++..+.++-|.+.. -+++.++|++||++|++.-+|+ .|.+
T Consensus 134 ---ey~i---~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt---~Grm 200 (382)
T COG1103 134 ---EYKI---TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT---VGRM 200 (382)
T ss_pred ---ceEe---cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee---eccc
Confidence 2222 3444 44544554456788888888888888888 7889999999999999999996 2211
Q ss_pred ccccccCCCCceeeh--hhhcCCCcceEEEEecHHHHHhhcCCC-C------c-ccccCCCCChHHHHHHHHHHHHhcC-
Q 011959 298 GAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVAPAG-P------M-YQAGTLSGNPLAMTAGIHTLKRLKE- 366 (474)
Q Consensus 298 ~~~~~~g~~pdi~t~--sK~l~~G~~iG~~~~~~~i~~~~~~~~-~------~-~~~~t~~~~~~~~aaa~aal~~~~~- 366 (474)
..+.-.+.+|.++- -|++++--|+|.+..+++..+.+-+.. + . ..+-|..+-|+.. ..+.+-...+
T Consensus 201 -pvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivT--lmASfP~V~eR 277 (382)
T COG1103 201 -PVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVT--LMASFPHVVER 277 (382)
T ss_pred -cccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHH--HHhcCHHHHHH
Confidence 12233456787754 489986569999999999877654321 1 0 1222333333332 2222211111
Q ss_pred -CCHHHHHHHHHHHHHHHHHHHh--hhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeE-ec
Q 011959 367 -PGTYEYLNKITGELTQGIIDAG--KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY-FA 442 (474)
Q Consensus 367 -~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~ 442 (474)
..+-+. -++.+++.+.|+++. .+.+... ...-+| .|+ .+....+ ..+ .....--+++.|.++||. +.
T Consensus 278 VkrWdeE-v~kaR~fv~elEkigg~~qlG~rP--k~HdLm-~Fe--tp~f~eI-akk--~~r~gyFlY~ELK~RgI~GI~ 348 (382)
T COG1103 278 VKRWDEE-VEKARWFVAELEKIGGVKQLGERP--KNHDLM-KFE--TPVFHEI-AKK--HKRKGYFLYEELKKRGIHGIQ 348 (382)
T ss_pred HHHHHHH-HHHHHHHHHHHHHhhhHHHhCCCC--ccccee-eec--CchHHHH-HHh--CcCCceeeHHHHHhcCccccc
Confidence 222222 345677888887764 1222110 011111 121 1100000 000 001112357888899886 45
Q ss_pred ccCCcceEEe-cCCcHHHHHHHHHHHHHHHhh
Q 011959 443 PSQFEAGFTS-LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 443 ~~~~~~~~~~-~~~t~e~i~~~l~~l~~~~~~ 473 (474)
|+....+-++ +..+.|+++..++++++++++
T Consensus 349 ~G~Tk~~K~svyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 349 PGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred cCceeEEEEEeecCCHHHHHHHHHHHHHHHHh
Confidence 5554455554 788999999999999998865
No 345
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.40 E-value=6.5e-11 Score=119.47 Aligned_cols=160 Identities=18% Similarity=0.143 Sum_probs=106.0
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g 216 (474)
..+...++.+.+++.. +.+..++++||+.|+.+++... ...+++||+....|.+.......... ..|
T Consensus 67 ~~pt~~~le~~la~l~-g~~~~v~fsSG~~Ai~~al~~l--l~~Gd~VI~~~~~y~~t~~~~~~~l~----------~~G 133 (437)
T PRK05613 67 TNPTVEALENRIASLE-GGVHAVAFASGQAAETAAILNL--AGAGDHIVTSPRLYGGTETLFLVTLN----------RLG 133 (437)
T ss_pred cChHHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHHHh--cCCCCEEEECCCccHHHHHHHHHHHH----------hcC
Confidence 3555678888888877 4467888888999999888732 34567788776667664221111100 001
Q ss_pred CCCCCCCceEEcc-CCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccC
Q 011959 217 VPKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (474)
Q Consensus 217 ~~~~~~~~~~~~~-~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (474)
.++..++ .+|++++++.++. ++++|++|...|+.|.+.+ +++|+++|+++|+++|+|.++.. +
T Consensus 134 ------i~v~~vd~~~d~e~l~~~l~~---~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a~---g 197 (437)
T PRK05613 134 ------IEVTFVENPDDPESWQAAVQP---NTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIAT---A 197 (437)
T ss_pred ------eEEEEECCCCCHHHHHHhCCc---cCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCcc---c
Confidence 1233332 3378999988873 5778888888788888888 99999999999999999999942 1
Q ss_pred CCccccccCCCCcee--ehhhhcCC-CcceEEEEe
Q 011959 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG 327 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~ 327 (474)
.......+|. |++ ++.|.++| |--+|+++.
T Consensus 198 ~~~~p~~~Ga--Divv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 198 ALVRPLELGA--DVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred cccChHHhCC--CEEEeeccceecCCCcceeEEEE
Confidence 1111112344 666 57799886 544566544
No 346
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.30 E-value=4.6e-10 Score=113.34 Aligned_cols=252 Identities=21% Similarity=0.171 Sum_probs=158.0
Q ss_pred CCHHHHHHHHHHHHhcC----CCCCCCHHHHHHHHHHHhhCCCCC--eEEEeCCHHHHHHHHHHHhHhhcC----C----
Q 011959 116 ADDQVLAALGETMKKGT----SFGAPCLLENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTG----R---- 181 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~----~~~~~~~~~~~la~~l~~~~~~~~--~v~~~~sGseA~~~al~~ar~~~~----~---- 181 (474)
.++...+++...+.+.. .+......+.++..++.+.+...+ .-.||+||||||..|+.+||.... .
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 46677777777776632 223446778899999999886323 468999999999999999876542 1
Q ss_pred ---cEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE-EEEEccccC
Q 011959 182 ---ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA-AIILEPVVG 257 (474)
Q Consensus 182 ---~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a-~vi~ep~~~ 257 (474)
...|++....|-+..-++...|.+....+.... .+.+ |+++|++.+.++ .+. +|+..-...
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~----------~~~i---d~~~l~~~i~~~--t~~g~vV~~aGtT 218 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT----------DYRI---DVDALEEAIDEN--TIGGVVVGTAGTT 218 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC----------cccc---CHHHHHHHHHhh--ccCceEEEEecCC
Confidence 114666667888777777777765433221100 0111 899999999864 222 255555556
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-c-c-CCCccccccCC-CCceee--hhhhcCCCcceEEEEecHH-
Q 011959 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R-L-AYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRRD- 330 (474)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r-~-g~~~~~~~~g~-~pdi~t--~sK~l~~G~~iG~~~~~~~- 330 (474)
+.|.+-| +++|.++|++||++|++|-++.|| - . ...+.+ .+++ ..|.++ +-|.+-.-++.|+++.+++
T Consensus 219 ~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e 293 (460)
T COG0076 219 DTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEE 293 (460)
T ss_pred CCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccccCCCCCceEEEEECHH
Confidence 6888988 999999999999999999999988 3 1 221110 1333 235554 4576666678999987765
Q ss_pred -HHHhhcCCCCccc-----ccCCCCCh--HHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHH
Q 011959 331 -IMEMVAPAGPMYQ-----AGTLSGNP--LAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDA 387 (474)
Q Consensus 331 -i~~~~~~~~~~~~-----~~t~~~~~--~~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~~ 387 (474)
+.+.+.....+.- ..|..++. -..++..+.++.+-.++ +.++..++.+++.+.|++.
T Consensus 294 ~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~ 361 (460)
T COG0076 294 ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL 361 (460)
T ss_pred HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4444331111111 01111122 23445556677765444 4444457777777777764
No 347
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.29 E-value=6e-10 Score=110.59 Aligned_cols=229 Identities=17% Similarity=0.161 Sum_probs=137.7
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
++...+|.+.++++. +.+.++.++||+.|+.+++.. ....+++||+....|.+.......... ..|
T Consensus 63 ~P~~~~lE~~la~le-g~~~av~~sSG~aAi~~al~a--ll~~GD~Vl~~~~~yg~t~~~~~~~~~----------~~G- 128 (384)
T PRK06434 63 NPTVQAFEEKYAVLE-NAEHALSFSSGMGAITSAILS--LIKKGKRILSISDLYGQTFYFFNKVLK----------TLG- 128 (384)
T ss_pred ChhHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHH--HhCCCCEEEEecCccchHHHHHHHHHH----------hcC-
Confidence 455577777787777 567889999999999999984 244567788866656553322211110 011
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCC
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 297 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~ 297 (474)
.++..++.++.+.++ +. ++++++|++|.+.|+++.+.+ +++|.++|++++ +++|.++.. .
T Consensus 129 -----i~v~fvd~~~~~~~~--l~--~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s-----~ 188 (384)
T PRK06434 129 -----IHVDYIDTDRLNSLD--FD--PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFAS-----P 188 (384)
T ss_pred -----cEEEEECCCChhhee--ec--CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCC-----c
Confidence 123344433334433 22 336889999999888888877 999999999998 466999831 1
Q ss_pred ccccccCCCCceee--hhhhcCC-C-cceEEEEe-cHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 298 GAQEYFGVTPDLTT--LGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 298 ~~~~~~g~~pdi~t--~sK~l~~-G-~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
......+...|+++ ..|.++| | .-.|.++. ++++.+.++. .....-...+|+.++.++..|+.+ +..+++
T Consensus 189 ~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~---~~~~~G~~~~~~~A~l~~~gL~tL--~~R~~r 263 (384)
T PRK06434 189 YNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE---RRKTLGSNPDPIQAYLALRGLKTL--GLRMEK 263 (384)
T ss_pred ccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH---HHHhcCCCCCHHHHHHHHhCCCcH--HHHHHH
Confidence 11122334467764 5699985 3 43555555 4556555541 111112234666655555554433 455666
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeeE------------EeeeceeEEEEEe
Q 011959 373 LNKITGELTQGIIDAGKKAGHAIC------------GGYISGMFGFFFT 409 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~------------v~~~g~~~~i~~~ 409 (474)
..++...+.+.|++ ++.+.. ..+.|.|+.|++.
T Consensus 264 ~~~~a~~~a~~L~~----~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 264 HNKNGMELARFLRD----SKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred HHHHHHHHHHHHHc----CCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 66777777776664 332211 2356888888884
No 348
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.29 E-value=8e-10 Score=108.21 Aligned_cols=235 Identities=19% Similarity=0.164 Sum_probs=146.3
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
++....|.+.++++- +.+..+.++||..|+..++.. ....++.|+..+..|.|....+...... .|+
T Consensus 62 nPT~~~lE~~~a~LE-g~~~~~afsSGmaAI~~~~l~--ll~~GD~vl~~~~~YG~t~~~~~~~l~~----------~gi 128 (396)
T COG0626 62 NPTRDALEEALAELE-GGEDAFAFSSGMAAISTALLA--LLKAGDHVLLPDDLYGGTYRLFEKILQK----------FGV 128 (396)
T ss_pred CccHHHHHHHHHHhh-CCCcEEEecCcHHHHHHHHHH--hcCCCCEEEecCCccchHHHHHHHHHHh----------cCe
Confidence 445567777777776 678899999999999998773 3344788998888887744333222110 111
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCC
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 297 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~ 297 (474)
++..+...+.+.+++.+.+ +++++|++|++-|+.-.+.+ +++|.++|+++|+++|+|+.+.. +
T Consensus 129 ------~~~~~d~~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNTfat-----P 191 (396)
T COG0626 129 ------EVTFVDPGDDEALEAAIKE--PNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNTFAT-----P 191 (396)
T ss_pred ------EEEEECCCChHHHHHHhcc--cCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECCccc-----c
Confidence 2343444456666666653 37999999999999888888 99999999999999999999952 1
Q ss_pred ccccccCCCCcee--ehhhhcCCC--cceEEEEecH-HHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcCCCHHHH
Q 011959 298 GAQEYFGVTPDLT--TLGKIIGGG--LPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (474)
Q Consensus 298 ~~~~~~g~~pdi~--t~sK~l~~G--~~iG~~~~~~-~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (474)
..+.-+..-.||+ +.+|-++|. .=.|.++++. ++.+.+... .....+ ....|.-+...+..|+.+ .-..++
T Consensus 192 ~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~-~~~~~G-~~l~p~dA~l~lRGlkTL--~~Rm~~ 267 (396)
T COG0626 192 VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA-QRANTG-AVLSPFDAWLLLRGLRTL--ALRMER 267 (396)
T ss_pred cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH-HHhhcC-CCCCHHHHHHHHhccchH--HHHHHH
Confidence 2222233335665 789999974 4456566555 444544210 000111 133455555444444332 334455
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeeE------------------EeeeceeEEEEEec
Q 011959 373 LNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFTE 410 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~------------------v~~~g~~~~i~~~~ 410 (474)
..++...+.+.|++ ++.+.. ..+.|.|+.|++..
T Consensus 268 ~~~nA~~IA~~L~~----~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 268 HNENALKIAEFLAD----HPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred HHHHHHHHHHHHhc----CCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 56666666666655 232211 22478899999864
No 349
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.28 E-value=8.7e-10 Score=103.74 Aligned_cols=167 Identities=19% Similarity=0.171 Sum_probs=119.6
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
++-...|.++++.+-++. ..+.+.||..|+..|+.. ....++.||....-|-|.+..+-...
T Consensus 61 NPT~~vlE~RiAaLEGG~-aa~a~aSG~AA~~~ai~~--la~aGD~iVss~~LYGGT~~lf~~tl--------------- 122 (426)
T COG2873 61 NPTTDVLEERIAALEGGV-AALAVASGQAAITYAILN--LAGAGDNIVSSSKLYGGTYNLFSHTL--------------- 122 (426)
T ss_pred CchHHHHHHHHHHhhcch-hhhhhccchHHHHHHHHH--hccCCCeeEeeccccCchHHHHHHHH---------------
Confidence 455577888888776443 456778899999999984 33446778877777766443332210
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCC
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 297 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~ 297 (474)
+..+-++..+..+|++.+++.|++ ++++|.+|.+-|+.+.+.. +++|.++|++||++||+|...+. +
T Consensus 123 -~~~Gi~v~fvd~~d~~~~~~aI~~---nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at-----p 189 (426)
T COG2873 123 -KRLGIEVRFVDPDDPENFEAAIDE---NTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT-----P 189 (426)
T ss_pred -HhcCcEEEEeCCCCHHHHHHHhCc---ccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCCc-----c
Confidence 111224566666789999999984 7999999999999999998 99999999999999999998852 2
Q ss_pred ccccccCCCCcee--ehhhhcCC-CcceEEEEecHHHHHhh
Q 011959 298 GAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGRRDIMEMV 335 (474)
Q Consensus 298 ~~~~~~g~~pdi~--t~sK~l~~-G~~iG~~~~~~~i~~~~ 335 (474)
+.+.-+....||+ +++|.+|| |--+|.++...--.++-
T Consensus 190 yl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~ 230 (426)
T COG2873 190 YLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWT 230 (426)
T ss_pred eecchhhcCCCEEEEeecccccCCccccceEEEeCCccccc
Confidence 2233333445776 79999996 78888887655444433
No 350
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.27 E-value=7.8e-09 Score=101.61 Aligned_cols=341 Identities=15% Similarity=0.054 Sum_probs=179.0
Q ss_pred EEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhh
Q 011959 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 178 (474)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~ 178 (474)
.|||+.+-.++ +-..++..+||.. |. .|+ -++-..+|.+.+++++ +.+.++++.+|..+...+.++ +
T Consensus 42 V~IDLrSDTgT---~apS~~m~aAM~~----GDD~Y~-gdpSv~~Lee~vael~-G~E~alpthqGRgaE~Il~~~---~ 109 (467)
T TIGR02617 42 VFIDLLTDSGT---GAVTQSMQAAMMR----GDEAYS-GSRSYYALAESVKNIF-GYQYTIPTHQGRGAEQIYIPV---L 109 (467)
T ss_pred eEEECccCCCC---CCCCHHHHHHHHc----CCcccc-cCchHHHHHHHHHHHh-CCceEEECCCCchHHHHHHHh---h
Confidence 46898887432 2346778777765 42 233 3444567777777777 788999999999999999884 4
Q ss_pred cC--CcEEE------EEeCCCCCCc-hhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC--C-CHHHHHHHHhcCC-C
Q 011959 179 TG--RERII------KFEGCYHGHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF--N-DVSALENLFENNK-G 245 (474)
Q Consensus 179 ~~--~~~ii------~~~~~yhg~~-~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~--~-d~~~le~~l~~~~-~ 245 (474)
.+ ++.++ ++...||-.+ -+....+|.....+..+ ... ......++ | |++.|++.|++++ +
T Consensus 110 ~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~--ea~-----~~~~~~~fkG~~dl~~le~~I~~~g~~ 182 (467)
T TIGR02617 110 IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTK--EAF-----DTGVRYDFKGNFDLEGLERGIEEVGPN 182 (467)
T ss_pred cccccccccccccccccceEEEEecchHHHHHcCceeecccch--hhc-----ccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence 33 12222 1122344333 23444455432221110 000 00011111 1 8999999998643 4
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc----Cc---cc-CCC-cc-c----cccCCCCcee-
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT----GF---RL-AYG-GA-Q----EYFGVTPDLT- 310 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~----g~---r~-g~~-~~-~----~~~g~~pdi~- 310 (474)
++..+.+.-.+|..|..+.+.+.+++++++|++||+.+++|-+-. -| |. +.. .. . +.+. ..|.+
T Consensus 183 ~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~-~aDsvt 261 (467)
T TIGR02617 183 NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK-YADMLA 261 (467)
T ss_pred CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc-cCCEEE
Confidence 566665555555544444456669999999999999999996541 01 00 100 00 0 1111 23544
Q ss_pred -ehhhhcCCCcceEEE-EecHH----HHHhhcCCCC-cccccCCCCChHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 011959 311 -TLGKIIGGGLPVGAY-GGRRD----IMEMVAPAGP-MYQAGTLSGNPLA-MTAGIHTLKRLKEPGTYEYLNKITGELTQ 382 (474)
Q Consensus 311 -t~sK~l~~G~~iG~~-~~~~~----i~~~~~~~~~-~~~~~t~~~~~~~-~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 382 (474)
|+||.++. |+|.+ +++++ +.+..+.... .-.+-||++-.-- +.|....|+..-+++++.+--+..++|.+
T Consensus 262 ~slsKglgA--pvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~ 339 (467)
T TIGR02617 262 MSAKKDAMV--PMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVN 339 (467)
T ss_pred EEcCCCCCC--cccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHH
Confidence 78898864 78776 55544 3333332111 1234466653222 22222345544456666666677788888
Q ss_pred HHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEe---ccc-------C------
Q 011959 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYF---APS-------Q------ 445 (474)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v---~~~-------~------ 445 (474)
+|.+. +++... ..|.-+.++-..- ..++....-|. ..++-.|. +-||-. ... .
T Consensus 340 ~L~~~----Gvpi~~-~Gghav~iDa~~~-lphip~~~fpa----~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~ 409 (467)
T TIGR02617 340 GLEEI----GVVCQQ-AGGHAAFVDAGKL-LPHIPADQFPA----HALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPC 409 (467)
T ss_pred HHHhC----CCcEEe-cCccEEEEehhhh-CCCCChhhCcH----HHHHHHHHHHcCcceEeecceecccCCCCCccCCC
Confidence 88764 444432 3333333322110 01111111122 33433333 445421 111 0
Q ss_pred -CcceEE---ecCCcHHHHHHHHHHHHHHHh
Q 011959 446 -FEAGFT---SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 446 -~~~~~~---~~~~t~e~i~~~l~~l~~~~~ 472 (474)
...+|+ .-..|.+++|...+++..+.+
T Consensus 410 ~~el~RlaipRrvyt~~h~d~v~~~~~~~~~ 440 (467)
T TIGR02617 410 PAELLRLTIPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_pred ccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence 012343 246699999999999988764
No 351
>PRK15029 arginine decarboxylase; Provisional
Probab=99.25 E-value=6.4e-10 Score=117.61 Aligned_cols=233 Identities=10% Similarity=0.035 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccC-CCCCCCCC
Q 011959 139 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL-GLPDSPGV 217 (474)
Q Consensus 139 ~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~~g~ 217 (474)
....+..+..++.++.....+.+||.|.+|.+++. +..++++.|+++...|-+...++.++|..+..+ +.-...|+
T Consensus 205 G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~---a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi 281 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQ---ACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGI 281 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHH---HhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 33344444455556333455567777778887777 555666777788899999999999988754321 11111222
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCe--------EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEI--------AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~--------a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
+.. +...+-+.+.+++.|+++++.. ++||+.|.+ -|.+.. +++|.++|+++|+.|++||+|
T Consensus 282 ~~~-----i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEAh 350 (755)
T PRK15029 282 IGP-----IYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDRLHFDEAW 350 (755)
T ss_pred ccC-----CCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCeEEEECcc
Confidence 110 0000114889999998876543 566677755 477777 999999999999999999999
Q ss_pred cCc-ccCCCccc-ccc-----C-CCCc-eee--hhhhcCCCcc-eEEEEecHH--HH--HhhcCCCCcccccCCCCChHH
Q 011959 290 TGF-RLAYGGAQ-EYF-----G-VTPD-LTT--LGKIIGGGLP-VGAYGGRRD--IM--EMVAPAGPMYQAGTLSGNPLA 353 (474)
Q Consensus 290 ~g~-r~g~~~~~-~~~-----g-~~pd-i~t--~sK~l~~G~~-iG~~~~~~~--i~--~~~~~~~~~~~~~t~~~~~~~ 353 (474)
.+. +.+..+.. ... . ..+| +++ .-|.+++ +. .+++..+.. .+ +.+.. .+....|.|.+-+-
T Consensus 351 Gah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~~~~id~~r~~~--~l~~~qSTSPSY~L 427 (755)
T PRK15029 351 YGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFSRFNQ--AYMMHATTSPLYAI 427 (755)
T ss_pred ccccccCccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCCccccCHHHHHH--HHHHHcCCCcHHHH
Confidence 554 44332221 111 1 2367 553 5688863 33 333333221 11 22221 12233455777777
Q ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHh
Q 011959 354 MTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAG 388 (474)
Q Consensus 354 ~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~ 388 (474)
++..-.+.+.++. ..+.++..+....+++.|.++.
T Consensus 428 mASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 428 CASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 7766666666653 4567777888888888887653
No 352
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.25 E-value=7.5e-09 Score=95.68 Aligned_cols=331 Identities=16% Similarity=0.097 Sum_probs=190.1
Q ss_pred EEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHH-Hh---c---CCC-C--CCCHHHHHHHHHHHhhCC-CCCeEEEeC
Q 011959 94 WDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM-KK---G---TSF-G--APCLLENVLAEMVISAVP-SIEMVRFVN 162 (474)
Q Consensus 94 ~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~-~~---~---~~~-~--~~~~~~~~la~~l~~~~~-~~~~v~~~~ 162 (474)
-+.+|-.||| | |.||..++.+.+...+.. +. + ..+ + ..-.+-+.|..+|+-+.+ ...+|.+++
T Consensus 27 ~lp~~viyLd---g---nSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~d 100 (407)
T COG3844 27 ALPGGVIYLD---G---NSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTD 100 (407)
T ss_pred cCCCCeEEee---c---cccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeC
Confidence 3456667776 3 678865545555444433 22 1 111 0 112333455555555554 466888888
Q ss_pred CHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEcc-CCCHHHHHHHHh
Q 011959 163 SGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP-FNDVSALENLFE 241 (474)
Q Consensus 163 sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~-~~d~~~le~~l~ 241 (474)
|-+--+.-.|-.+...+.++.||++++..+..-.... .++....... +.+. -..++++++.+.
T Consensus 101 tts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a---------------~g~~~~~~~~-~~~~~~~~P~~~~~~~~ 164 (407)
T COG3844 101 TTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIA---------------EGLADLLGIG-YDLEGVIAPRALEEAIT 164 (407)
T ss_pred CcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhh---------------cchhhhhccc-ccceeeeChHHHHHhhc
Confidence 7766666666655455657888888876544221111 0110000000 0000 014667888776
Q ss_pred cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCcccc--ccCCCCceeehhhhcCCC
Q 011959 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQE--YFGVTPDLTTLGKIIGGG 319 (474)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~--~~g~~pdi~t~sK~l~~G 319 (474)
++++.|++..++--+|.... +.+|-+++++||++++.|=+|+ .| -...+ ..|++--+-|-=|-+++|
T Consensus 165 ---dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs---aG-avp~~Lh~~gaDfaigcsyKYLNgG 233 (407)
T COG3844 165 ---DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS---AG-AVPVDLHAAGADFAIGCSYKYLNGG 233 (407)
T ss_pred ---cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc---cC-CcceeecccCCCeeeeeeceeccCC
Confidence 58999999999999999999 9999999999999999999995 11 11112 223333345667888865
Q ss_pred c-ceEEEEecHHHHHhhcC--------CCCcccc------------cCCCCChHHHHHHHHHHHHhcC---CCHHHHHHH
Q 011959 320 L-PVGAYGGRRDIMEMVAP--------AGPMYQA------------GTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNK 375 (474)
Q Consensus 320 ~-~iG~~~~~~~i~~~~~~--------~~~~~~~------------~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~ 375 (474)
- -.+++...++..+...+ .+++... -.-..+.+++++...+|++..+ .+++++--.
T Consensus 234 PGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSla 313 (407)
T COG3844 234 PGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLA 313 (407)
T ss_pred CCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhH
Confidence 3 34444444333332221 0111000 0012244566666678887665 445555556
Q ss_pred HHHHHHHHHHHHhhhcCCeeEEe----eeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE
Q 011959 376 ITGELTQGIIDAGKKAGHAICGG----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (474)
Q Consensus 376 ~~~~l~~~L~~~~~~~~~~~~v~----~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~ 451 (474)
+.+++.+.++.....+++....+ .+|.-+.+.. | ....+++.|.++||+.--.....+|+
T Consensus 314 LTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~h-------------p---~~~~V~qaLi~rGVigD~R~P~vlRf 377 (407)
T COG3844 314 LTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYH-------------P---HGYQVMQALIDRGVIGDFREPDVLRF 377 (407)
T ss_pred HHHHHHHHHHhccccCCcEEeccchhhhccceeeEec-------------C---cHHHHHHHHHHcCccccccCCCeeee
Confidence 66777766666544444322111 1232222222 1 23678999999999865444445565
Q ss_pred ---ecCCcHHHHHHHHHHHHHHHhh
Q 011959 452 ---SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 452 ---~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
++..+-+|+=.+++.|+++++.
T Consensus 378 gftPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 378 GFTPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred cCccceechhHHHHHHHHHHHHHHh
Confidence 6788999999999999999875
No 353
>PLN02452 phosphoserine transaminase
Probab=99.22 E-value=3.1e-09 Score=104.77 Aligned_cols=311 Identities=11% Similarity=-0.007 Sum_probs=180.6
Q ss_pred CCHHHHHHHHHHHHhc--CC-------CCC--CCHHHHHHHHHHHhhCCC---CCeEEEeCCHHHHHHHHHHHhHhhcCC
Q 011959 116 ADDQVLAALGETMKKG--TS-------FGA--PCLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAFTGR 181 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~--~~-------~~~--~~~~~~~la~~l~~~~~~---~~~v~~~~sGseA~~~al~~ar~~~~~ 181 (474)
-+++|++++.+.+.+. +. +.. ..+...+..+.|.+.+.- .+-+++..|||.++++++.. ...++
T Consensus 18 lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~n--l~~~~ 95 (365)
T PLN02452 18 LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLN--LCKPG 95 (365)
T ss_pred CCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHh--cCCCC
Confidence 3789999988876431 11 111 134556677777777742 23345568899999999984 23355
Q ss_pred cEEEEEeCCCCCCchhHHHhc-CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCC
Q 011959 182 ERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 260 (474)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (474)
+++++...+++|....-.+.. |...... ....... .. ..+++++ +.+ ++...|.+..+...+|
T Consensus 96 ~~~l~~~~G~fg~r~~~~a~~~g~~~~~~-~~~~~~~--------~~--~~~~~~~----~~~-~~~~~v~~~hnETstG 159 (365)
T PLN02452 96 DKADFVVTGSWSKKAAKEAKKYCKTNVIA-SGKDEKY--------TK--IPSVSEW----ELT-PDAKFVHICANETIHG 159 (365)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCCcEEE-ecCCCCC--------CC--CCChHHc----CCC-CCCcEEEECCCCCCCc
Confidence 778888777777544333322 2211100 0000000 00 0134443 322 3577788887777788
Q ss_pred cc-cCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCceeehhhhcC-CCcceEEEEecHHHHHhhcCC
Q 011959 261 FI-APKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 338 (474)
Q Consensus 261 ~i-~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~t~sK~l~-~G~~iG~~~~~~~i~~~~~~~ 338 (474)
+. .+ ++++. ++++|+|-+++ + .+.....+.+|+ |+.+..|.+| .| +|.+++++++++.+...
T Consensus 160 v~~~~----~~~i~------~~~lvVDa~Ss-~-g~~pidv~~~~v--~~~saqK~lGP~G--l~~v~vr~~~l~~~~~~ 223 (365)
T PLN02452 160 VEFKD----YPDVG------NVPLVADMSSN-F-LSKPVDVSKYGV--IYAGAQKNVGPSG--VTIVIIRKDLIGNARPI 223 (365)
T ss_pred EecCc----ccccC------CCeEEEECCcc-c-cCcccCHHHcCE--EEEecccccCCCC--eEEEEEcHHHHhhcccC
Confidence 84 55 44442 38999999885 1 122334445555 6678889997 34 89999999998776532
Q ss_pred CCcc--------cccCC-CCChHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeec-eeE
Q 011959 339 GPMY--------QAGTL-SGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS-GMF 404 (474)
Q Consensus 339 ~~~~--------~~~t~-~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g-~~~ 404 (474)
.+.+ ..+++ +.|..++.+..++|+.+.++ ...++.+++.+++++.|++...-+....+...+. ..+
T Consensus 224 ~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~v 303 (365)
T PLN02452 224 TPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNV 303 (365)
T ss_pred CCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEE
Confidence 1111 11233 44556677777889988753 4555666666667776665310011111100011 122
Q ss_pred EEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--CcceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.|.+ ++.....+|.+.+.++|++..++. ...+|++ -.++.++++.+++.++++-++
T Consensus 304 sF~~-------------~~~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 304 PFTL-------------GGSELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEEc-------------CCchhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 2222 122356789999999999987763 2246775 467999999999999987654
No 354
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.19 E-value=2e-09 Score=101.61 Aligned_cols=301 Identities=15% Similarity=0.139 Sum_probs=170.4
Q ss_pred CHHHHHHHHHHHHh-cCCCC------CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEE
Q 011959 117 DDQVLAALGETMKK-GTSFG------APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 186 (474)
Q Consensus 117 ~p~v~~a~~~~~~~-~~~~~------~~~~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~ 186 (474)
+.++++.....+.. +-+.| +..-.+..+|+.+.++-+ +++.|++|.|.|.|+...|++..+ ..++.|++
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~-~~~~Gvli 166 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA-GKKTGVLI 166 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc-CCCCceEe
Confidence 45566666666655 21222 345678889999888764 478999999999999999997533 25677888
Q ss_pred EeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCC---CCeEEEEEccccCCCCccc
Q 011959 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSGFIA 263 (474)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~G~i~ 263 (474)
.-|-|.-++ ..++..|......-+....++.. |.++|++.+++.. +-.++|+++|.+ ++|.+.
T Consensus 167 PiPQYPLYs-Ati~l~~~~~v~YyLdEe~~W~l------------d~~el~~~~~eA~k~i~~r~lvvINPGN-PTGqvl 232 (475)
T KOG0258|consen 167 PIPQYPLYS-ATISLLGGTQVPYYLDEESNWSL------------DVAELERSVDEARKGINPRALVVINPGN-PTGQVL 232 (475)
T ss_pred ecCCCchhH-HHHHHhCCcccceeeccccCCCC------------CHHHHHHHHHHHhccCCceEEEEECCCC-ccchhh
Confidence 888886543 34444333222111111112111 7888888876532 234677788864 466666
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCc-c-cC-CCcccc----ccC-CCCc---ee---ehhhhcC--CCcceEEE-E
Q 011959 264 PKPDFLNAIRRITKENGALLIFDEVMTGF-R-LA-YGGAQE----YFG-VTPD---LT---TLGKIIG--GGLPVGAY-G 326 (474)
Q Consensus 264 ~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r-~g-~~~~~~----~~g-~~pd---i~---t~sK~l~--~G~~iG~~-~ 326 (474)
..+. +++|..+|.++|++|+.||||-.= . .+ +++.+. ++| ..+| +. +.||++. .|.|-|++ +
T Consensus 233 s~e~-ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv 311 (475)
T KOG0258|consen 233 SEEN-IEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMES 311 (475)
T ss_pred cHHH-HHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeec
Confidence 5444 999999999999999999999433 2 33 333321 222 2343 22 4689887 58999998 3
Q ss_pred e--cHHHHHhhcCCCCcccccCCCCChHHHHHHHH----------HHH--HhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011959 327 G--RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIH----------TLK--RLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (474)
Q Consensus 327 ~--~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~a----------al~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (474)
. .+++.+.+.+...... +.+..+++..-. ..+ .-+.+...+.++++.+.+.+.++++ .
T Consensus 312 ~n~~prv~~qi~Kl~si~l----c~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~----~ 383 (475)
T KOG0258|consen 312 LNRDPRVKQQIKKLASIKL----CPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSL----E 383 (475)
T ss_pred ccCChhHHHHHHHHHhhhh----cCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhc----C
Confidence 3 3455444432111000 111111111100 011 1112566677777777777766654 4
Q ss_pred CeeEEeeeceeEEEEEecCCCcCcccc----cccchHHHHHHHHHHH-HCCeEecccC
Q 011959 393 HAICGGYISGMFGFFFTEGPVYNFEDA----KKSETTKFARFYRGML-EEGVYFAPSQ 445 (474)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~-~~Gv~v~~~~ 445 (474)
.+.+-+..|.|..+.-..-+...+..+ ..|| .-.+..|+ .-||.+.|+.
T Consensus 384 gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD----~FYc~~LLe~tGIcvVPGS 437 (475)
T KOG0258|consen 384 GISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPD----EFYCLKLLEATGICVVPGS 437 (475)
T ss_pred ceeeccCccceeecccccCCHHHHHHHHHhCCCCc----HHHHHHHHHhcCeEEecCC
Confidence 455667788887764322221111111 1122 12345555 4599999874
No 355
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.19 E-value=6.6e-10 Score=107.47 Aligned_cols=188 Identities=16% Similarity=0.170 Sum_probs=124.7
Q ss_pred HHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCC
Q 011959 141 ENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKG 220 (474)
Q Consensus 141 ~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~ 220 (474)
+..|.+.+++.. +.+.++.++||..|...+++. .....++||.++..|.|. ...+..... .-|
T Consensus 79 ~~~le~~iaal~-ga~~~l~fsSGmaA~~~al~~--L~~~g~~iV~~~~~Y~gT-~~~l~~~~~---------~~g---- 141 (409)
T KOG0053|consen 79 RDVLESGIAALE-GAAHALLFSSGMAAITVALLH--LLPAGDHIVATGDVYGGT-LRILRKFLP---------KFG---- 141 (409)
T ss_pred hHHHHHHHHHHh-CCceEEEecccHHHHHHHHHH--hcCCCCcEEEeCCCcccH-HHHHHHHHH---------HhC----
Confidence 344555555554 567799999999999999985 345678899999999884 333322111 001
Q ss_pred CCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccc
Q 011959 221 ATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQ 300 (474)
Q Consensus 221 ~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~ 300 (474)
.....+...|++.+++.+++ ++.+|.+|++-|+...+.. +++|+++|+++|+++|+|+...+. .-+
T Consensus 142 --ie~~~vd~~~~~~~~~~i~~---~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~p-----~~~ 207 (409)
T KOG0053|consen 142 --GEGDFVDVDDLKKILKAIKE---NTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGSP-----YNQ 207 (409)
T ss_pred --ceeeeechhhHHHHHHhhcc---CceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCcc-----ccc
Confidence 12333333356666666653 7999999999999888888 999999999999999999998643 122
Q ss_pred cccCCCCcee--ehhhhcCCC--cceEEEEec-HHHHHhhcCCCCcccccCCCCChHHHHHHHHHHH
Q 011959 301 EYFGVTPDLT--TLGKIIGGG--LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 362 (474)
Q Consensus 301 ~~~g~~pdi~--t~sK~l~~G--~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 362 (474)
+-+..-.||+ +.+|.|+|. +=.|.++.+ +++...+.. ....--+..+|+.+.-...-++
T Consensus 208 ~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~---~~~~lg~~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 208 DPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKF---LQEDLGWCEDPFDLFLLSRGLK 271 (409)
T ss_pred ChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHH---HHHHhcCCCCHHHHHHHhcCcc
Confidence 2333346877 588999974 445666775 677666652 1122234567777665554443
No 356
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.12 E-value=2.7e-08 Score=98.27 Aligned_cols=292 Identities=11% Similarity=0.034 Sum_probs=158.1
Q ss_pred CHHHHHHHHHHHhhCCC---CCeEEEeCCHHHHHHHHHHHhHhh-cCCcEEEEEeCCCCCCchh--HHHhcCCC-CccCC
Q 011959 138 CLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAF-TGRERIIKFEGCYHGHADP--FLVKAGSG-VATLG 210 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~---~~~v~~~~sGseA~~~al~~ar~~-~~~~~ii~~~~~yhg~~~~--~~~~~g~~-~~~~~ 210 (474)
.+...+..+.|.+.+.. .+-++++.|||.++|+++.. .. .+++++++. +++|.... .....|.+ +.
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~n--l~~~~g~~vLv~--g~FG~r~~~eia~~~g~~~v~--- 110 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWS--MLGCRGVDVLAW--ESFGKGWVTDVTKQLKLPDVR--- 110 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHH--cCCCCCCeEEEE--CHHHHHHHHHHHHhcCCCCcE---
Confidence 34556667777777752 22366799999999999994 22 234567764 35554422 22222331 22
Q ss_pred CCCCCCCCCCCCCceEEccCC---CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHH-hCCEEEEe
Q 011959 211 LPDSPGVPKGATYETLTAPFN---DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-NGALLIFD 286 (474)
Q Consensus 211 ~~~~~g~~~~~~~~~~~~~~~---d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~-~g~llI~D 286 (474)
.+..+++ |+++++. + .. |.+..+-..+|+..| ++ +++++ +++++|+|
T Consensus 111 --------------~l~~~~g~~~~~~~ve~--~---~~---v~~vhnETSTGv~np----v~---~i~~~~~~~lliVD 161 (374)
T TIGR01365 111 --------------VLEAEYGKLPDLKKVDF--K---ND---VVFTWNGTTSGVRVP----NG---DFIPADREGLTICD 161 (374)
T ss_pred --------------EEcCCCCCCCCHHHcCC--C---CC---EEEecCCCchheecc----cc---ccccccCCCcEEEE
Confidence 2223332 5666652 1 12 445455556788888 44 44443 58999999
Q ss_pred ccccCcccCCCccccccCCCCcee--ehhhhcCCCcceEEEEecHHHHHhhcCCCC-----c--------------cccc
Q 011959 287 EVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGP-----M--------------YQAG 345 (474)
Q Consensus 287 Ev~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~-----~--------------~~~~ 345 (474)
-+-+ | .+..+..+ + .|++ +..|+|++---+|.++.+++.++....... . ....
T Consensus 162 avSs-~-g~~~l~~d--~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
T TIGR01365 162 ATSA-A-FAQDLDYH--K--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGS 235 (374)
T ss_pred ccch-h-cCCCCChh--H--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCC
Confidence 7774 2 11222222 2 5655 567999842238888999988876552111 0 0112
Q ss_pred CC-CCChHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeece-eEEEEEecCCCcCcccc
Q 011959 346 TL-SGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-MFGFFFTEGPVYNFEDA 419 (474)
Q Consensus 346 t~-~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~-~~~i~~~~~~~~~~~~~ 419 (474)
|. ..+..+..+...+|+.+.+ ++..++.+++.+.+++.++++..-.....+-..... ...+.+..+.+... .
T Consensus 236 t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~--~ 313 (374)
T TIGR01365 236 TINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDAL--D 313 (374)
T ss_pred CCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCcccccc--c
Confidence 33 2333445555566665544 345555666666666666665311111100001122 12222211100000 0
Q ss_pred cccchHHHHHHHHHHHHCCeEecccCC----cceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 420 KKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
..+......++.+.|.++||.+.++.. ..+|+. -.++.+|++.+++.|+=+.++
T Consensus 314 ~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 314 EDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred cchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 001111136788999999999887643 456773 567999999999999877654
No 357
>PLN02271 serine hydroxymethyltransferase
Probab=99.12 E-value=1.4e-07 Score=95.57 Aligned_cols=268 Identities=17% Similarity=0.104 Sum_probs=146.1
Q ss_pred CCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHh-cCCCCccCCCCCCCCCCCCCCCceEEccCC------CHH
Q 011959 162 NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFN------DVS 234 (474)
Q Consensus 162 ~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~------d~~ 234 (474)
-||+.||.+++.. .+.+++.|+..+..+-|+....... .+..+ ...++ ..+.+.++.| |.+
T Consensus 221 ~SGs~AN~aV~~A--Ll~PGD~IL~ldl~~GGHlshg~~~~~g~~v------s~sG~----~~~~vpY~~d~~~g~IDyd 288 (586)
T PLN02271 221 YSCTSANFAVYTG--LLLPGDRIMGLDSPSGGHMSHGYYTPGGKKV------SGASI----FFESLPYKVNPQTGYIDYD 288 (586)
T ss_pred ccHHHHHHHHHHH--hcCCCCEEEEecCCCCCchhccccccccccc------ccccc----eEEEEEcccccccCccCHH
Confidence 3899999999973 2445677888766544432211100 00000 00010 0112222232 789
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCCCCceee-
Q 011959 235 ALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTT- 311 (474)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pdi~t- 311 (474)
++++..... ++++|++...... ...+ +++++++|+++|++|++|-+| .|+ -.+ .+... +. ..|++|
T Consensus 289 ~lek~a~~~--rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~aGLIa~g-~~~sP-~~-~aDvvt~ 357 (586)
T PLN02271 289 KLEEKALDF--RPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHISGLVAAK-ECVNP-FD-YCDIVTS 357 (586)
T ss_pred HHHHHhhhc--CCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECcccccccccC-cCCCC-Cc-CCcEEEe
Confidence 999865543 6788888664433 3456 999999999999999999999 566 222 11111 11 357774
Q ss_pred -hhhhcCCCcceEEEEecHH--------------------HHHhhcCC-CCcccccCCCCChHHHHHHHHHHHHhcC---
Q 011959 312 -LGKIIGGGLPVGAYGGRRD--------------------IMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKE--- 366 (474)
Q Consensus 312 -~sK~l~~G~~iG~~~~~~~--------------------i~~~~~~~-~~~~~~~t~~~~~~~~aaa~aal~~~~~--- 366 (474)
..|+|.|. +-|.++.+++ +.+.+... -+.+++++.. -.+++-..+++.+..
T Consensus 358 TTHKtLrGP-rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn---~~IAalAvalkea~~~ef 433 (586)
T PLN02271 358 TTHKSLRGP-RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHN---NHIAALAIALKQVATPEY 433 (586)
T ss_pred CCcccCCCC-CceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhH---HHHHHHHHHHHHHhChHH
Confidence 56999752 3366666653 33333321 1222333221 123344455665544
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEee-eceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC
Q 011959 367 PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ 445 (474)
Q Consensus 367 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 445 (474)
.++.+++.++.+.|.+.|.+. ++.....+ ...++.+++.... .......+.|-+.||.+....
T Consensus 434 k~Ya~QVv~NAkaLA~~L~~~----G~~vv~ggTdnHlvLvDl~~~g------------~~G~~ae~~Le~~~I~~Nkn~ 497 (586)
T PLN02271 434 KAYMQQVKKNAQALASALLRR----KCRLVTGGTDNHLLLWDLTTLG------------LTGKNYEKVCEMCHITLNKTA 497 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHHC----CCeEeeCCCCcceeeecCcccC------------CCHHHHHHHHHHcCeEecccc
Confidence 346667777788887777664 32211111 1234444442210 012344455556788875431
Q ss_pred ---------CcceEE------ecCCcHHHHHHHHHHHHHHHh
Q 011959 446 ---------FEAGFT------SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 446 ---------~~~~~~------~~~~t~e~i~~~l~~l~~~~~ 472 (474)
...+|+ .....++|++++.+.|.++++
T Consensus 498 iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 498 IFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 123555 356678899988888888764
No 358
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.12 E-value=1e-10 Score=115.43 Aligned_cols=231 Identities=15% Similarity=0.113 Sum_probs=140.2
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccC-CCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL-GLPDS 214 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~ 214 (474)
+.....+-.+..++.+ +.++.+| +||.|.+|.+++. +..++++.|.++...|-+...++.++|..+..+ +....
T Consensus 64 p~G~I~eAe~~aA~~f-GAd~t~flvnGsT~g~~a~i~---a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAF-GADKTFFLVNGSTSGNQAMIM---ALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHH-TESEEEEESSHHHHHHHHHHH---HHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhc-CCCeEEEEecCchHHHHHHHH---HhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccc
Confidence 4444455555555566 5566555 5666667888887 566777778888999999988998888643221 11111
Q ss_pred CCCCCCCCCceEEccC--CCHHHHHHHHhcCCCCeE---EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 215 PGVPKGATYETLTAPF--NDVSALENLFENNKGEIA---AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 215 ~g~~~~~~~~~~~~~~--~d~~~le~~l~~~~~~~a---~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
.|++ ..++. -+.+.+++.|+++++..+ +||+.|.+ -|.+.. +++|.++|+++++.|++||+|
T Consensus 140 ~gi~-------~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEAh 206 (417)
T PF01276_consen 140 YGII-------GGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVDEAH 206 (417)
T ss_dssp TS-B-------EEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE-TT
T ss_pred cCCc-------cCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEEccc
Confidence 1221 11111 135899999998876655 77777765 478888 999999999999999999999
Q ss_pred cCc-ccCCCccccccCCCCc-------ee--ehhhhcCCCcceEEEEecHHH---HHhhcCCCCcccccCCCCChHHHHH
Q 011959 290 TGF-RLAYGGAQEYFGVTPD-------LT--TLGKIIGGGLPVGAYGGRRDI---MEMVAPAGPMYQAGTLSGNPLAMTA 356 (474)
Q Consensus 290 ~g~-r~g~~~~~~~~g~~pd-------i~--t~sK~l~~G~~iG~~~~~~~i---~~~~~~~~~~~~~~t~~~~~~~~aa 356 (474)
.+. +.. .+.........| ++ +.-|.+++=-..+++..+.+. .+.+.. .+....|.|.+-+-++.
T Consensus 207 Gah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~--~l~~~~TTSPSY~lmAS 283 (417)
T PF01276_consen 207 GAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNE--ALSMHQTTSPSYPLMAS 283 (417)
T ss_dssp -TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHH--HHHHHS-SS--HHHHHH
T ss_pred cccccCC-CCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHH--HHHHHcCCChHHHHHHH
Confidence 544 333 222233344455 55 466988732245666444331 233321 12234456777777777
Q ss_pred HHHHHHHhc-C--CCHHHHHHHHHHHHHHHHHHH
Q 011959 357 GIHTLKRLK-E--PGTYEYLNKITGELTQGIIDA 387 (474)
Q Consensus 357 a~aal~~~~-~--~~~~~~~~~~~~~l~~~L~~~ 387 (474)
.-.+.+.++ . ..++++..++.+.+|+.|++.
T Consensus 284 lD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~ 317 (417)
T PF01276_consen 284 LDVARAQMEEEEGRELLEEAIELAEEFRKKINRL 317 (417)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 777777773 2 568888889999999999663
No 359
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.09 E-value=9.1e-09 Score=107.93 Aligned_cols=311 Identities=11% Similarity=0.016 Sum_probs=168.4
Q ss_pred CHHHHHHHHHHHhhCCCCC-eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhH-HHhcCCCCc-cCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF-LVKAGSGVA-TLGLPDS 214 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~-~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~-~~~~g~~~~-~~~~~~~ 214 (474)
+....+-.+..++.+ +.+ ..+++||.|.+|.+++. +..++++.|+++...|-+.... +.++|..+. ..+.-..
T Consensus 173 eG~i~eAq~~AA~~f-gAd~tyFlvNGTS~gn~a~i~---a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~ 248 (720)
T PRK13578 173 EGAAKDAQKHAAKVF-NADKTYFVLNGTSASNKVVTN---ALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNP 248 (720)
T ss_pred ChHHHHHHHHHHHHh-CCCceEEEeCChhHHHHHHHH---HhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccc
Confidence 333344444455556 455 45567777778888887 5667777888899999887764 888776432 2111111
Q ss_pred CCCCCCCCCceEEccCC--CHHHHHHHHhcC-CC-------CeEEEEEccccCCCCcccCCHHHHHHHHHH-HHHhCCEE
Q 011959 215 PGVPKGATYETLTAPFN--DVSALENLFENN-KG-------EIAAIILEPVVGNSGFIAPKPDFLNAIRRI-TKENGALL 283 (474)
Q Consensus 215 ~g~~~~~~~~~~~~~~~--d~~~le~~l~~~-~~-------~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l-~~~~g~ll 283 (474)
.|++. .++.. +.+.+++.|+++ ++ -.++||+.|.+ .|.+.. ++.|.++ |++++ .|
T Consensus 249 ~Gi~g-------~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~-~l 314 (720)
T PRK13578 249 FGFIG-------GIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD-YI 314 (720)
T ss_pred cCCcC-------CCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC-cE
Confidence 22211 11111 357799999877 32 13456666655 477777 8899998 78888 99
Q ss_pred EEeccccCc-ccCCC---ccccccCCCCc----eee--hhhhcCCCc-ceEEEEecHHHH---------HhhcCCCCccc
Q 011959 284 IFDEVMTGF-RLAYG---GAQEYFGVTPD----LTT--LGKIIGGGL-PVGAYGGRRDIM---------EMVAPAGPMYQ 343 (474)
Q Consensus 284 I~DEv~~g~-r~g~~---~~~~~~g~~pd----i~t--~sK~l~~G~-~iG~~~~~~~i~---------~~~~~~~~~~~ 343 (474)
++||+|.+. +.... +........+| ++| .-|.+++ + ..+++..+...+ +.+.. .+..
T Consensus 315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~i~g~~~~v~~~r~~~--al~m 391 (720)
T PRK13578 315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNHIKGQARYCPHKRLNN--AFML 391 (720)
T ss_pred EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCcccccccccCCHHHHHH--HHHH
Confidence 999999655 43322 11111233455 554 5587763 3 234443332111 12221 1112
Q ss_pred ccCCCCChHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCe--eEEee-------------------
Q 011959 344 AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHA--ICGGY------------------- 399 (474)
Q Consensus 344 ~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~v~~------------------- 399 (474)
..|.|.+-+-++..-.+-..++. ..+.++..+....+|+.|.+....+.+. ..+.+
T Consensus 392 ~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~ 471 (720)
T PRK13578 392 HASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFS 471 (720)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccc
Confidence 33445555555544444444432 5677778888888888883332211111 00000
Q ss_pred ---eceeEEEEE------ecCCCcCcccccccchH-----------HHHHHHHHHHHCCeEecccCCcceE--EecCCcH
Q 011959 400 ---ISGMFGFFF------TEGPVYNFEDAKKSETT-----------KFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSS 457 (474)
Q Consensus 400 ---~g~~~~i~~------~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~Gv~v~~~~~~~~~--~~~~~t~ 457 (474)
.-...++.- .-++.+-... .+.-. -...+.+.|.++||.+.-.+...+. ++...|+
T Consensus 472 ~~p~~~whgf~~~~~~~~~lDP~KltI~--t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~ 549 (720)
T PRK13578 472 FEPGEKWHGFEGYAEDQYFVDPCKLLLT--TPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDM 549 (720)
T ss_pred cccCccccccccccccccccCCceEEEE--cCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCH
Confidence 000000000 0000000000 01000 0356788888889998877655443 3678899
Q ss_pred HHHHHHHHHHHHHH
Q 011959 458 DDIQHTITAAEKVL 471 (474)
Q Consensus 458 e~i~~~l~~l~~~~ 471 (474)
++++.++++|.++-
T Consensus 550 ~~~~~Lv~aL~~f~ 563 (720)
T PRK13578 550 AKLQQLVAMLARFE 563 (720)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998763
No 360
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.08 E-value=3.5e-08 Score=103.53 Aligned_cols=311 Identities=10% Similarity=-0.004 Sum_probs=173.9
Q ss_pred CHHHHHHHHHHHhhCCCCCeE-EEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccC-CCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMV-RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL-GLPDSP 215 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v-~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~~ 215 (474)
+....+-.+..++.+ +.++. +++||.|.+|.+++. +..++++.|+++...|-+...++.++|..+..+ +.-...
T Consensus 194 ~G~i~eAe~~aA~~f-gAd~tyfvvNGTS~~n~av~~---a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 194 TGPHLEAEEYIARTF-GAEQSYIVTNGTSTSNKIVGM---YAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNAL 269 (713)
T ss_pred ChHHHHHHHHHHHHh-CCCcEEEEeCChHHHHHHHHH---HhcCCCCEEEeecccHHHHHHHHHHcCCeeEEeccccccc
Confidence 334444445555556 55555 556666778888887 556777788889999998888888888743321 111112
Q ss_pred CCCCCCCCceEEccCCCHHHHHHHHhcCCCC---eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEE-EEeccccC
Q 011959 216 GVPKGATYETLTAPFNDVSALENLFENNKGE---IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL-IFDEVMTG 291 (474)
Q Consensus 216 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~---~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~ll-I~DEv~~g 291 (474)
|++.... ... + +.+.+++.|+++++. .++||+.|.+ .|.+.. ++.|.++| |+.+ ++||+|.+
T Consensus 270 Gi~g~I~--~~~--~-~~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilvDEAhga 335 (713)
T PRK15399 270 GILGGIP--RRE--F-TRDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHFDSAWVP 335 (713)
T ss_pred CCcCCCC--hhh--c-cHHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEEeccchh
Confidence 2211100 000 0 458999999987643 4677777754 577777 77788887 6766 59999966
Q ss_pred c-ccCCCc----cccccCCCCcee-----ehhhhcCCCc-ceEEEEecHHHH-HhhcCCCCcccccCCCCChHHHHHHHH
Q 011959 292 F-RLAYGG----AQEYFGVTPDLT-----TLGKIIGGGL-PVGAYGGRRDIM-EMVAPAGPMYQAGTLSGNPLAMTAGIH 359 (474)
Q Consensus 292 ~-r~g~~~----~~~~~g~~pdi~-----t~sK~l~~G~-~iG~~~~~~~i~-~~~~~~~~~~~~~t~~~~~~~~aaa~a 359 (474)
. +....+ +.. .+-.+|.+ +.-|.+++ + ..+++..+..+- +.+.. .+....|.|.+-+.++..-.
T Consensus 336 h~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~--a~~m~~STSPsY~LmASLD~ 411 (713)
T PRK15399 336 YTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNE--AFMMHTSTSPSYPIVASVET 411 (713)
T ss_pred hhhcCcccCCcChhh-CCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHH--HHHHHcCCCcHHHHHHHHHH
Confidence 5 433211 111 11135655 46688863 3 345554433221 12221 12233344666666666666
Q ss_pred HHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcC-CeeEEee------ecee--------EEEE-----E-ecCCCcC
Q 011959 360 TLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG-HAICGGY------ISGM--------FGFF-----F-TEGPVYN 415 (474)
Q Consensus 360 al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~------~g~~--------~~i~-----~-~~~~~~~ 415 (474)
+...++. ..+.++..+....+|+.|.++..... ....+-+ ...+ .++. . .-++.+-
T Consensus 412 a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~Kl 491 (713)
T PRK15399 412 AAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKV 491 (713)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceE
Confidence 6666652 56778888888889988877532110 0000000 0000 0000 0 0001000
Q ss_pred ccccc--------ccchHHHHHHHHHHHHCCeEecccCCcceE--EecCCcHHHHHHHHHHHHHH
Q 011959 416 FEDAK--------KSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 416 ~~~~~--------~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~--~~~~~t~e~i~~~l~~l~~~ 470 (474)
..... .........+.+.|.++||.+.-.+...+. ++...|+++++.+++.|.++
T Consensus 492 tI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 492 TILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred EEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 00000 001122456778888999998877655443 36788999999999998866
No 361
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.08 E-value=1.5e-07 Score=89.76 Aligned_cols=308 Identities=16% Similarity=0.168 Sum_probs=171.4
Q ss_pred CCHHHHHHHHHHHHh----c---CC-CCC---CCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcE
Q 011959 116 ADDQVLAALGETMKK----G---TS-FGA---PCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRER 183 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~----~---~~-~~~---~~~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ 183 (474)
..|.|.+|.-..+.+ | .. |++ .+..+.-..++..++| +.+.+-+ -.||+.||.+++.. ...+++.
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LF-ga~~anVQPhSGs~AN~av~~A--ll~pGDt 114 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLF-GAEYANVQPHSGSQANQAVYLA--LLQPGDT 114 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHh-CCCccccCCCCchHHHHHHHHH--HcCCCCe
Confidence 578999998887765 1 11 222 2333444444555566 4443322 45899999999983 3345677
Q ss_pred EEEEeCCCCCCchhH--HHhcCCCCccCCCCCCCCCCCCCCCceEEccCC------CHHHHHHHHhcCCCCeEEEEEccc
Q 011959 184 IIKFEGCYHGHADPF--LVKAGSGVATLGLPDSPGVPKGATYETLTAPFN------DVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 184 ii~~~~~yhg~~~~~--~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~------d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
|+..+-+.-|+.... ...+|.. .+.+.++++ |.|+++++.+++ +++.||+=.
T Consensus 115 imgm~l~~GGHltHg~~v~~sG~~-----------------~~~v~Y~vd~et~~IDyD~~~k~a~e~--kPK~ii~G~- 174 (413)
T COG0112 115 IMGLDLSHGGHLTHGSPVNFSGKL-----------------FNVVSYGVDPETGLIDYDEVEKLAKEV--KPKLIIAGG- 174 (413)
T ss_pred EecccCCCCCcccCCCCCCcccee-----------------EEeEecccccccCccCHHHHHHHHHHh--CCCEEEECc-
Confidence 777654432321111 0111110 123333333 789999998876 456666632
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCCCCcee--ehhhhcCCCcceEEEEecH-H
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRR-D 330 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~~G~~iG~~~~~~-~ 330 (474)
+.--...+ +++++++|++.|++|++|=+| .|+ -.|. +. .-+.. .|++ |.-|+|-| -|-|.+++++ +
T Consensus 175 -SaY~r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~-~p-~P~~~-AdvVTtTTHKTlrG-PrGG~Il~~~ee 245 (413)
T COG0112 175 -SAYSRPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGV-HP-NPLPH-ADVVTTTTHKTLRG-PRGGIILTNDEE 245 (413)
T ss_pred -cccccccC----HHHHHHHHHHhCceEEehHHHHHHHHhccc-CC-CCCCc-cceEeCCcccCCCC-CCceEEEeccHH
Confidence 11122344 999999999999999999999 677 3332 11 11111 4676 46699974 4667777774 7
Q ss_pred HHHhhcCCCCcccccCCCCChHH-HHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEE
Q 011959 331 IMEMVAPAGPMYQAGTLSGNPLA-MTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 406 (474)
Q Consensus 331 i~~~~~~~~~~~~~~t~~~~~~~-~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i 406 (474)
+.+.+.. ..+-+ +.+++-+- +++-..++....++ ++.+++.++.+.|.+.|.+.+.+ ++. -.-...++.+
T Consensus 246 l~kkin~--aVFPg-~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~--vvs-GgTdnHl~lV 319 (413)
T COG0112 246 LAKKINS--AVFPG-LQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFK--VVS-GGTDNHLVLV 319 (413)
T ss_pred HHHHhhh--hcCCc-cCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCe--Eec-CCccceEEEE
Confidence 8888763 22222 22332222 22222344444443 45666777788888877764321 111 0011234455
Q ss_pred EEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCC----------cceEE------ecCCcHHHHHHHHHHHHHH
Q 011959 407 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------EAGFT------SLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------~~~~~------~~~~t~e~i~~~l~~l~~~ 470 (474)
++.... .........|-+.||.+....- ..+|+ .....++|++++.+.+.++
T Consensus 320 Dl~~~~------------~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~v 387 (413)
T COG0112 320 DLRSKG------------LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADV 387 (413)
T ss_pred EcccCC------------CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHH
Confidence 543111 1123444555566988864421 12455 2566788999999988888
Q ss_pred Hhh
Q 011959 471 LRQ 473 (474)
Q Consensus 471 ~~~ 473 (474)
+..
T Consensus 388 l~~ 390 (413)
T COG0112 388 LDG 390 (413)
T ss_pred Hhc
Confidence 753
No 362
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.04 E-value=1.5e-07 Score=102.62 Aligned_cols=310 Identities=11% Similarity=0.130 Sum_probs=168.9
Q ss_pred EEeccCChhhccCCC-CCHHHHHHHHHHHHhcCCCC-CCCH-------HHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHH
Q 011959 101 YIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFG-APCL-------LENVLAEMVISAVP-SIEMVRFVNSGTEACMG 170 (474)
Q Consensus 101 ~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~-~~~~-------~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~ 170 (474)
|.+|.+. .+.+| .++.|.+++.+..+-.+.|+ |..+ ...++...++++++ +.+.+-++.++|.+.++
T Consensus 104 ~~~fiG~---G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea 180 (993)
T PLN02414 104 FKSYIGM---GYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEA 180 (993)
T ss_pred cccccCC---CCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHH
Confidence 4454433 45555 56667688887665444343 2222 23466667777775 56789999999999997
Q ss_pred HHHHhHhhc--CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeE
Q 011959 171 VLRLARAFT--GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (474)
Q Consensus 171 al~~ar~~~--~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (474)
++... .++ ++++|++.+..| +.+...+..... ..|+ ++..++..+.+ ...+.+.
T Consensus 181 ~~~a~-~~~~g~~~~VlVs~~~h-P~~~~v~~t~a~---------~~Gi------eV~~v~~~~~~-------~~~~~v~ 236 (993)
T PLN02414 181 MAMCN-NILKGKKKKFLIASNCH-PQTIDVCQTRAD---------GLGL------EVVVADEKDFD-------YSSGDVC 236 (993)
T ss_pred HHHHH-hcccCCCCEEEEcCccC-HhHHHHHHHhhh---------hcCC------EEEEecchhhc-------cccCceE
Confidence 77533 333 345666665555 434333322110 1111 34444432211 1122455
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE--eccccCcccCCCccccccCCCCceee--hhhhc---C-CCc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGFRLAYGGAQEYFGVTPDLTT--LGKII---G-GGL 320 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~--DEv~~g~r~g~~~~~~~~g~~pdi~t--~sK~l---~-~G~ 320 (474)
+++ ..+.+..|.+.+ +++|.++|+++|+++++ |-+..+. .-....+| .|+++ .-|.. | ||-
T Consensus 237 ~vl-vq~P~~~G~v~d----v~~I~~~ah~~GaL~iVaad~lal~~----l~~pge~G--ADi~vgsgqKwg~P~G~GGP 305 (993)
T PLN02414 237 GVL-VQYPATDGEVLD----YAEFVKNAHANGVKVVMATDLLALTM----LKPPGEWG--ADIVVGSAQRFGVPMGYGGP 305 (993)
T ss_pred EEE-EecCCCCeEEcC----HHHHHHHHHHcCCEEEEEECHHHhcC----CCCHhhcc--CcEEEECCCccccCCCCCCC
Confidence 555 444466899988 99999999999999999 4332111 00122233 46653 23433 2 455
Q ss_pred ceEEEEecHHHHHhhcCC----------CCcc---------c--ccCCCCChHHHHHHHHHHH-----HhcC---CCHHH
Q 011959 321 PVGAYGGRRDIMEMVAPA----------GPMY---------Q--AGTLSGNPLAMTAGIHTLK-----RLKE---PGTYE 371 (474)
Q Consensus 321 ~iG~~~~~~~i~~~~~~~----------~~~~---------~--~~t~~~~~~~~aaa~aal~-----~~~~---~~~~~ 371 (474)
..|++.+++++.+.+-.. ++.+ | .-..+.|..+..+..+++. ++.. ++..+
T Consensus 306 ~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ 385 (993)
T PLN02414 306 HAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 385 (993)
T ss_pred CeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 599999999886644210 0110 0 0011123322222222222 2222 34456
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE
Q 011959 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~ 451 (474)
++.++..+++++|.+.. +.+.. ......+.+.+ ++ ..++.+.|.++||.++....+.+++
T Consensus 386 ri~~la~~l~~~L~~~G--~~~~~--~~~f~~vt~~~-------------~~---~~~v~~~L~~~gI~l~~~~~~~lrv 445 (993)
T PLN02414 386 RVHGLAGVFAAGLKKLG--FQVQS--LPFFDTVKVKC-------------SD---ADAIADAAAKVGINLRVVDANTVTV 445 (993)
T ss_pred HHHHHHHHHHHHHhhcC--CccCC--CCCcCeEEEec-------------CC---HHHHHHHHHHCCCeeEEecCCeEEE
Confidence 77778888888886542 11111 11111112221 11 1578899999999887665445555
Q ss_pred --ecCCcHHHHHHHHHHHH
Q 011959 452 --SLAHSSDDIQHTITAAE 468 (474)
Q Consensus 452 --~~~~t~e~i~~~l~~l~ 468 (474)
....|++|||.++++|.
T Consensus 446 s~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 446 SFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred EeeccCCHHHHHHHHHHHc
Confidence 46789999999999996
No 363
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.02 E-value=5.6e-08 Score=95.71 Aligned_cols=264 Identities=17% Similarity=0.139 Sum_probs=136.0
Q ss_pred eCCHHHHHHHHHHHhHhhc-CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC------CH
Q 011959 161 VNSGTEACMGVLRLARAFT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN------DV 233 (474)
Q Consensus 161 ~~sGseA~~~al~~ar~~~-~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~------d~ 233 (474)
..||+.||..++. ++. ++++|+.++...=|+...........+. . .....+.+.++.+ |.
T Consensus 92 p~SGs~An~av~~---aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~--------~--~~~~~~~~~y~~d~~~~~ID~ 158 (399)
T PF00464_consen 92 PHSGSQANLAVYM---ALLKPGDTIMGLSLPHGGHLSHGSSVNFKKIS--------A--SGLYFESVPYPVDPDTGLIDY 158 (399)
T ss_dssp -SSHHHHHHHHHH---HHT-TT-EEEEEEGGGT--GGGT-TTSHSBSS--------H--HHHHSEEEEEEB-TTTSSB-H
T ss_pred cCCchHHHHHHHH---HHHhhcCcEEecChhhcccccccccccccccc--------c--ccceEEEEeeeeecCCCeECH
Confidence 4589999999988 444 5678888865432221100000000000 0 0000012222222 89
Q ss_pred HHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCCCccccccCCCCceee
Q 011959 234 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTT 311 (474)
Q Consensus 234 ~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pdi~t 311 (474)
+.++++++++ ++++||+-...-+ ...+ +++++++|++.|++|++|-.| .|+ -.| .+. +-+.. .|++|
T Consensus 159 d~l~~~a~~~--kPklIi~G~S~y~--~~~d----~~~~reIad~vga~l~~D~sH~~GLIa~g-~~~-~P~~~-ADvvt 227 (399)
T PF00464_consen 159 DELEKLAKEH--KPKLIICGASSYP--RPID----FKRFREIADEVGAYLMADISHIAGLIAGG-LFP-NPFPY-ADVVT 227 (399)
T ss_dssp HHHHHHHHHH----SEEEEE-SSTS--S-------HHHHHHHHHHTT-EEEEE-TTTHHHHHTT-SS---GCCT-SSEEE
T ss_pred HHHHHHHhhc--CCCEEEECchhcc--CccC----HHHHHHHHHhcCcEEEecccccccceehh-eec-Ccccc-ceEEE
Confidence 9999999876 6778888664321 1233 899999999999999999999 676 333 222 22332 58875
Q ss_pred --hhhhcCCCcceEEEEec--------------HHHHHhhcCCCCcccccCCCCChHHHHHH-HHHHHHhcC---CCHHH
Q 011959 312 --LGKIIGGGLPVGAYGGR--------------RDIMEMVAPAGPMYQAGTLSGNPLAMTAG-IHTLKRLKE---PGTYE 371 (474)
Q Consensus 312 --~sK~l~~G~~iG~~~~~--------------~~i~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~---~~~~~ 371 (474)
.-|+|.| -+-|.++.+ +++.+.+.+ ..+-+ ..+++-....|+ ..++....+ .++.+
T Consensus 228 ~sThKtl~G-PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~--avfP~-~qg~~h~~~iaalAval~ea~~~~fk~Ya~ 303 (399)
T PF00464_consen 228 GSTHKTLRG-PRGGIILTNKGSKNVDKKGKEIDEELAEKIDS--AVFPG-LQGGPHMHRIAALAVALKEALSPEFKEYAK 303 (399)
T ss_dssp EESSGGG-S-SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHH--HHTTT-T-SS--HHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred eeccccccc-cCceEEEEcCCccccCCcccccHHHHHHHhcc--ccCCC-cccCcchhHHHHHHHHHhcccCHHHHHHHH
Confidence 5699974 466777788 778887763 12221 222222322333 344555433 46777
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC------
Q 011959 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------ 445 (474)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------ 445 (474)
++.++.+.|.+.|.+.+.+. .. -.-...++++++... ........+.|.+.||.+....
T Consensus 304 qVv~NAk~La~~L~~~G~~v--~~-ggTd~H~vlvd~~~~------------~~~g~~a~~~Le~~gI~vnkn~iP~d~~ 368 (399)
T PF00464_consen 304 QVVKNAKALAEALQERGFKV--VT-GGTDNHQVLVDLRSF------------GIDGKEAEKALEEAGIIVNKNTIPGDRS 368 (399)
T ss_dssp HHHHHHHHHHHHHHHTT-EE--GG-GS-SSSEEEEEGGGG------------TS-HHHHHHHHHHTTEE-EEE--TTTST
T ss_pred HHHHHHHHHHHHHhhCCcEE--EE-CCCCCCeEEEEeccc------------ccchHHHHHHHHhcCeeecccccCCCCC
Confidence 78888888888888763321 11 011233455554321 1122456677778899985431
Q ss_pred ---CcceEEe------cCCcHHHHHHHHHHH
Q 011959 446 ---FEAGFTS------LAHSSDDIQHTITAA 467 (474)
Q Consensus 446 ---~~~~~~~------~~~t~e~i~~~l~~l 467 (474)
...+|+. ....++|++++.+.|
T Consensus 369 ~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 369 PFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp TTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred CCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 1246762 466788887776543
No 364
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.01 E-value=2.5e-08 Score=104.58 Aligned_cols=309 Identities=9% Similarity=-0.002 Sum_probs=172.5
Q ss_pred CCHHHHHHHHHHHhhCCCCCeE-EEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccC-CCCCC
Q 011959 137 PCLLENVLAEMVISAVPSIEMV-RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL-GLPDS 214 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~~~v-~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~ 214 (474)
++....+..+..++.+ +.++. +++||.|.+|.+++. +..++++.|+++...|-+...++.++|..+..+ +.-..
T Consensus 193 ~~G~i~eAe~~AA~~f-gAd~tyfvvNGTS~~n~av~~---a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~ 268 (714)
T PRK15400 193 HSGPHKEAEEYIARVF-NADRSYMVTNGTSTANKIVGM---YSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNA 268 (714)
T ss_pred CChHHHHHHHHHHHHh-CCCcEEEEeCchHHHHHHHHH---HhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccc
Confidence 3344444445555556 55555 456666778888777 556777788889999999888898888743321 11111
Q ss_pred CCCCCCCCCceEEccCCCHHHHHHHHhcCCCCe---EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011959 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291 (474)
Q Consensus 215 ~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~---a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (474)
.|++.... ... -+.+.+++.++++++.. ++||+.|.+ .|.+.. ++.|.++|+.++ |++||+|.+
T Consensus 269 ~Gi~g~I~--~~~---~~~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDEAwga 335 (714)
T PRK15400 269 YGILGGIP--QSE---FQHATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDSAWVP 335 (714)
T ss_pred cCCccCCC--ccc---cCHHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEccchh
Confidence 12211000 000 14799999998876433 477777754 577887 889999999887 689999976
Q ss_pred c-ccCCCc----cccccCCCC-c--ee--ehhhhcCCCcc-eEEEEe----c-HHHHHhhcCCCCcccccCCCCChHHHH
Q 011959 292 F-RLAYGG----AQEYFGVTP-D--LT--TLGKIIGGGLP-VGAYGG----R-RDIMEMVAPAGPMYQAGTLSGNPLAMT 355 (474)
Q Consensus 292 ~-r~g~~~----~~~~~g~~p-d--i~--t~sK~l~~G~~-iG~~~~----~-~~i~~~~~~~~~~~~~~t~~~~~~~~a 355 (474)
. .....+ +.. .|-.+ | ++ +.-|.+++ +. .+++.. + +++-+.+. ...|.|.+-+-++
T Consensus 336 h~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~a~~------m~~STSPsY~l~A 407 (714)
T PRK15400 336 YTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAYM------MHTTTSPHYGIVA 407 (714)
T ss_pred hhccCcccCCcChhh-cCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHHHHH------HHcCCCcHHHHHH
Confidence 5 433222 221 22221 3 44 45687763 21 222211 1 22223222 3334466666666
Q ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhc-CCeeEEeeece--------------eEEEE-E-----ecC
Q 011959 356 AGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISG--------------MFGFF-F-----TEG 411 (474)
Q Consensus 356 aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~v~~~g~--------------~~~i~-~-----~~~ 411 (474)
..-.+...++. ..+.++..+....+|+.|.++.... +....+-+.-. ..++. + .-+
T Consensus 408 SLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lD 487 (714)
T PRK15400 408 STETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLD 487 (714)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccC
Confidence 66666666652 5677888888888888887753210 00000000000 00000 0 000
Q ss_pred CCcCcccc-c-------ccchHHHHHHHHHHHHCCeEecccCCcceE--EecCCcHHHHHHHHHHHHHH
Q 011959 412 PVYNFEDA-K-------KSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKV 470 (474)
Q Consensus 412 ~~~~~~~~-~-------~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~--~~~~~t~e~i~~~l~~l~~~ 470 (474)
+.+-.... . ....-....+.+.|.++||.+.-.+...+. ++...|+++++.+++.|.++
T Consensus 488 P~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 488 PIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred CceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 00000000 0 000112346778888999998877655443 37888999999999998875
No 365
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.99 E-value=5.1e-08 Score=96.71 Aligned_cols=175 Identities=23% Similarity=0.233 Sum_probs=111.9
Q ss_pred CHHHHHHHHHHHhhCCCC--------CeEEEeCCHHHHHHHHHHHhHhhc-------C----CcEEEEEeCCCCCCchhH
Q 011959 138 CLLENVLAEMVISAVPSI--------EMVRFVNSGTEACMGVLRLARAFT-------G----RERIIKFEGCYHGHADPF 198 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~--------~~v~~~~sGseA~~~al~~ar~~~-------~----~~~ii~~~~~yhg~~~~~ 198 (474)
.+.+.++.+++++.++-. -.-+||+|||+||..|+..||... + .+-+|+....-|-+..-+
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 567889999999988522 257899999999999999887542 1 234666666668777777
Q ss_pred HHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC--CCC-eEEEEEccccCCCCcccCCHHHHHHHHHH
Q 011959 199 LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--KGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRI 275 (474)
Q Consensus 199 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~-~a~vi~ep~~~~~G~i~~~~~~l~~l~~l 275 (474)
+...|.++..++......+ |+++|++.|++. .+. +.+|+..-...++|.+-| +++|.++
T Consensus 158 a~~lGlg~~~I~~~~~~~m--------------d~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i 219 (373)
T PF00282_consen 158 ARILGLGVRKIPTDEDGRM--------------DIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADI 219 (373)
T ss_dssp HHHTTSEEEEE-BBTTSSB---------------HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHH
T ss_pred cceeeeEEEEecCCcchhh--------------hHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhh
Confidence 7777765433222111111 789998887642 122 334555555556888888 9999999
Q ss_pred HHHhCCEEEEeccccCc-ccCCCccccccCC-CCceee--hhhhcCCCcceEEEEecHH
Q 011959 276 TKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRRD 330 (474)
Q Consensus 276 ~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~-~pdi~t--~sK~l~~G~~iG~~~~~~~ 330 (474)
|++|+++|.+|-++.|. ........-..|+ ..|-++ .-|.++..++.|+++.+.+
T Consensus 220 ~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~ 278 (373)
T PF00282_consen 220 CEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDK 278 (373)
T ss_dssp HHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSG
T ss_pred ccccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecc
Confidence 99999999999999883 2111111112233 235554 6799988889999987764
No 366
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.98 E-value=2.1e-07 Score=89.65 Aligned_cols=295 Identities=18% Similarity=0.206 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhc-----CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCC
Q 011959 139 LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (474)
Q Consensus 139 ~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~-----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (474)
++..+|.++|++.. +.+.|-+ -|+|+++=.+-|.+.|+|- +.+++++...+-||......++.|..+..+...
T Consensus 109 ~li~~Lq~~L~~IT-G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~ 187 (496)
T COG1003 109 ELIYELQEWLKEIT-GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCD 187 (496)
T ss_pred HHHHHHHHHHHHhc-CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecC
Confidence 44568888998888 6666654 5789998888888777772 245666667789998777777777655443222
Q ss_pred CCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc---
Q 011959 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM--- 289 (474)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~--- 289 (474)
....+ |+++|++.+. ++++++++..++ .-|.. +++ +.+|+++.+++|..|..|-+-
T Consensus 188 ~~G~V--------------DlddLk~k~~---~~~AalMiTnPs-T~GvF--E~~-I~ei~~ivH~~Gg~vY~DGANlNA 246 (496)
T COG1003 188 ENGNV--------------DLDDLRAKAE---DNLAALMITNPS-TLGVF--EED-IREICEIVHEAGGQVYYDGANLNA 246 (496)
T ss_pred CCCCc--------------cHHHHHHHhc---cceeEEEeccCc-ccccc--hhh-HHHHHHHHHHcCCEEEecCcchhh
Confidence 11122 8999999887 467777775443 33432 334 999999999999999999765
Q ss_pred -cCc-ccCCCccccccCCCCcee--ehhhhc----CC-CcceEEEEecHHHHHhhcCC------CC----------cccc
Q 011959 290 -TGF-RLAYGGAQEYFGVTPDLT--TLGKII----GG-GLPVGAYGGRRDIMEMVAPA------GP----------MYQA 344 (474)
Q Consensus 290 -~g~-r~g~~~~~~~~g~~pdi~--t~sK~l----~~-G~~iG~~~~~~~i~~~~~~~------~~----------~~~~ 344 (474)
.|. |.|.++ .|++ -+-|+| || |-..|-+..++++...+-.. .. ....
T Consensus 247 ~vG~~rPGd~G--------~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~ 318 (496)
T COG1003 247 IVGLARPGDMG--------FDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVS 318 (496)
T ss_pred hhccccccccc--------cceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceee
Confidence 455 665432 2333 234555 43 45577777777776655320 00 0112
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCHH---HHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccc
Q 011959 345 GTLSGNPLAMTAGIHTLKRLKEPGTY---EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 421 (474)
Q Consensus 345 ~t~~~~~~~~aaa~aal~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~ 421 (474)
..+-+|.....-+.+.+..+-.+++. +...-+..|+.++|+.. ++++.. +.. ...-++.-+ ..+.+.
T Consensus 319 ~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~---y~~~y~--~~~-~~~HE~ild----~r~l~~ 388 (496)
T COG1003 319 AAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY---YPVPYT--GEN-RVAHECILD----ARPLKK 388 (496)
T ss_pred ccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc---CccccC--CCC-cceeEEEee----chHhHh
Confidence 23445555555556666655444332 33344577888888763 332211 111 112222111 000111
Q ss_pred cchHHHHHHHHHHHHCCeEecccCCc-----ceEE--ecCCcHHHHHHHHHHHHHHHhh
Q 011959 422 SETTKFARFYRGMLEEGVYFAPSQFE-----AGFT--SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 422 ~~~~~~~~~~~~l~~~Gv~v~~~~~~-----~~~~--~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
........++++|++.|+..-...++ .+.+ .=.-+.+++|++++++.++.++
T Consensus 389 ~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 389 ETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred hcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 12234578999999999975544433 1222 2344789999999999887654
No 367
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.95 E-value=1.3e-07 Score=91.33 Aligned_cols=227 Identities=18% Similarity=0.248 Sum_probs=143.7
Q ss_pred ccCCCC--CHHHHHHHHHHHHhcCC--C----CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCc
Q 011959 111 AIIGHA--DDQVLAALGETMKKGTS--F----GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 182 (474)
Q Consensus 111 ~~lG~~--~p~v~~a~~~~~~~~~~--~----~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~ 182 (474)
.++|-+ +|++++++.+.+..... + +....-...+++.++... +.+.+.++|.-+.|+..++- ++..+.
T Consensus 32 t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~-~aea~~ivnnn~aAVll~~~---al~~~~ 107 (395)
T COG1921 32 TNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLT-GAEAAAIVNNNAAAVLLTLN---ALAEGK 107 (395)
T ss_pred ccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhccc-chhheeeECCcHHHHHHHHh---hhccCC
Confidence 455553 79999999988876321 1 111111225555555444 57888899988888888876 555444
Q ss_pred EEEEEeC----CCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCC
Q 011959 183 RIIKFEG----CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (474)
Q Consensus 183 ~ii~~~~----~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (474)
++|+.-+ ++|......+..+|......+.. + .-...+++.+|.++. ....-+..++++.
T Consensus 108 EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t---n-------------~t~~~d~~~AIne~t-a~llkV~s~~~~f 170 (395)
T COG1921 108 EVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT---N-------------RTHLKDYELAINENT-ALLLKVHSSNYGF 170 (395)
T ss_pred eEEEEccccccCCCCChhHHHHHcCCEEEEeccc---C-------------cCCHHHHHHHhccCC-eeEEEEeeccccc
Confidence 4444322 47777777777777654432211 1 115788888998642 1222334444444
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCceeehh--hhcCCCcceEEEEecHHHHHhh
Q 011959 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMV 335 (474)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~t~s--K~l~~G~~iG~~~~~~~i~~~~ 335 (474)
.+.+ + ++++.++|++||+++|+|..-... + -.....+.+...+|++++| |.|+ |.+-|.++|++++++.+
T Consensus 171 ~~~l-~----~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~GaDLV~~SgdKllg-GPqaGii~GkKelI~~l 243 (395)
T COG1921 171 TGML-S----EEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGADLVSFSGDKLLG-GPQAGIIVGKKELIEKL 243 (395)
T ss_pred cccc-c----HHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCCCEEEEecchhcC-CCccceEechHHHHHHH
Confidence 4543 3 788999999999999999876322 2 1122233445568999877 7776 55688889999999988
Q ss_pred cCCCCcccccCCCCChHHHHHHHHHHHHhcCCC
Q 011959 336 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (474)
Q Consensus 336 ~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (474)
+.. ...-.+-......++..++|+.....+
T Consensus 244 q~~---~l~Ralrv~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 244 QSH---PLKRALRVDKETLAALEAALELYLQPE 273 (395)
T ss_pred Hhh---hhhhhhhcCcHhHHHHHHHHHHHcCch
Confidence 742 122234567788888889998876643
No 368
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.91 E-value=4.8e-07 Score=86.37 Aligned_cols=287 Identities=14% Similarity=0.131 Sum_probs=153.1
Q ss_pred HHHHHHHhhCC-CCCeEEEeCCHH-HHHHHHHHHhHhh-----------cCCcEEEEEeCCCCCCchhHHHhcCCCCccC
Q 011959 143 VLAEMVISAVP-SIEMVRFVNSGT-EACMGVLRLARAF-----------TGRERIIKFEGCYHGHADPFLVKAGSGVATL 209 (474)
Q Consensus 143 ~la~~l~~~~~-~~~~v~~~~sGs-eA~~~al~~ar~~-----------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~ 209 (474)
++.+..++.++ ..++++...+.| +-+.-++..+..+ .++-++++..|+|..+. .....-|-
T Consensus 73 e~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF-ai~E~~Gi----- 146 (425)
T PF12897_consen 73 EARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF-AITEHFGI----- 146 (425)
T ss_dssp HHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH-HHHHHCT------
T ss_pred HHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH-HHHHhhCc-----
Confidence 34444444443 456666654444 4444444433222 12467888899986532 22222232
Q ss_pred CCCCCCCCCCCCCCceEEccCC----CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHH-HHHhCCEEE
Q 011959 210 GLPDSPGVPKGATYETLTAPFN----DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI-TKENGALLI 284 (474)
Q Consensus 210 ~~~~~~g~~~~~~~~~~~~~~~----d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l-~~~~g~llI 284 (474)
+.+.+|.+ |++.+|+++.+. +.++.|.|-|.++|...+..++|-.++|+++ +...+..|+
T Consensus 147 --------------emi~VpM~~dGPDmD~Ve~LV~~D-~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~ 211 (425)
T PF12897_consen 147 --------------EMIPVPMTEDGPDMDMVEELVAED-PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF 211 (425)
T ss_dssp --------------EEEEEEEETTEE-HHHHHHHTHTS-TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred --------------EEEecCCCCCCCCHHHHHHHHhcC-CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence 23444432 899999998764 4799999999887743445566668888887 346799999
Q ss_pred EeccccCc--ccCC-C-cc-cc------ccCCCCcee----ehhhhcCCCcceEEEEecHHHHHhhcCCCCcccccCCCC
Q 011959 285 FDEVMTGF--RLAY-G-GA-QE------YFGVTPDLT----TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 349 (474)
Q Consensus 285 ~DEv~~g~--r~g~-~-~~-~~------~~g~~pdi~----t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~ 349 (474)
-|.+|+ + -++. . -. .. ..| .||.+ +.||.--+|-.++++.++++-++.+. ......|.+.
T Consensus 212 WDNAY~-vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~---~~~~~~tIgp 286 (425)
T PF12897_consen 212 WDNAYA-VHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGAGVAFFAASEANLAWIK---KHLSVQTIGP 286 (425)
T ss_dssp EE-TTT-T-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHH---HHHHHH-S--
T ss_pred eecCce-EeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCcceeeeecCHHHHHHHH---HHhcCceeCc
Confidence 999995 2 1111 0 00 01 111 45533 68996556667999999998888776 3334456677
Q ss_pred ChHHHHHHHHHHHHhcC-C-CHHHHHHHHHHHHHHHHH-------HHhh-hcCCee-EEeeeceeEEEEEecCCCcCccc
Q 011959 350 NPLAMTAGIHTLKRLKE-P-GTYEYLNKITGELTQGII-------DAGK-KAGHAI-CGGYISGMFGFFFTEGPVYNFED 418 (474)
Q Consensus 350 ~~~~~aaa~aal~~~~~-~-~~~~~~~~~~~~l~~~L~-------~~~~-~~~~~~-~v~~~g~~~~i~~~~~~~~~~~~ 418 (474)
+-+.|..=..- +.+ + ++.++.++..+.++-+++ +.+. ..++.. ..+..|.|+.++..+.
T Consensus 287 dKvNQLRHvrf---f~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G------- 356 (425)
T PF12897_consen 287 DKVNQLRHVRF---FKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG------- 356 (425)
T ss_dssp -HHHHHHHHHH---HHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-------
T ss_pred cHHHHHHHHHH---hcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-------
Confidence 77776554433 334 4 777788777777665443 3333 344443 4455566777666432
Q ss_pred ccccchHHHHHHHHHHHHCCeEecccCC----------cceEE-ecCCcHHHHHHHHHHHHHHHh
Q 011959 419 AKKSETTKFARFYRGMLEEGVYFAPSQF----------EAGFT-SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------~~~~~-~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.+.++.+.+.+.||.+.+.|. ..+|+ +..-+.||++.+++.+.-+++
T Consensus 357 -------~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 357 -------TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp --------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 246889999999999988642 13577 455688999999998876553
No 369
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.89 E-value=2.1e-06 Score=84.14 Aligned_cols=310 Identities=13% Similarity=0.017 Sum_probs=171.5
Q ss_pred CHHHHHHHHHHHHh--cCC-------CCC--CCHHHHHHHHHHHhhCC--CCCeEEEe-CCHHHHHHHHHHHhHhhcCCc
Q 011959 117 DDQVLAALGETMKK--GTS-------FGA--PCLLENVLAEMVISAVP--SIEMVRFV-NSGTEACMGVLRLARAFTGRE 182 (474)
Q Consensus 117 ~p~v~~a~~~~~~~--~~~-------~~~--~~~~~~~la~~l~~~~~--~~~~v~~~-~sGseA~~~al~~ar~~~~~~ 182 (474)
+++|++++++.+.+ +++ +.. ..+...+..+.|.+.+. ...+|+|. .|||.++++++.. .+.+++
T Consensus 16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~N--ll~~g~ 93 (364)
T PRK12462 16 PDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMN--FSRPGA 93 (364)
T ss_pred CHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHH--cCCCCC
Confidence 78899988877755 211 111 13445566666777664 22356555 5599999999884 223445
Q ss_pred EEE-EEeCCCCCCchhHHHhc-CCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCC
Q 011959 183 RII-KFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 260 (474)
Q Consensus 183 ~ii-~~~~~yhg~~~~~~~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (474)
+++ +...++.|....-.+.. | .+...... ... +.-.+ .+++.+ +.. ++.+.|.+..+...+|
T Consensus 94 ~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~--~~~------~~~~~--p~~~~~----~~~-~d~~~v~~t~NETstG 157 (364)
T PRK12462 94 AAPEYVTTGYWSRKAIGEASRVA-AMRVVWDG--AAS------GYRTL--PSLAEL----DWD-ARAPFRHYVSNETVEG 157 (364)
T ss_pred cEEEEEeCCHHHHHHHHHHHhcC-CceEecCc--CCC------CCCcC--CCHHHh----ccC-CCCcEEEEccCCCCce
Confidence 455 56666666443332221 2 12111000 000 00000 033433 222 2567777877777788
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhcC-CCcceEEEEecHHHHHhhcC
Q 011959 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIG-GGLPVGAYGGRRDIMEMVAP 337 (474)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~-~G~~iG~~~~~~~i~~~~~~ 337 (474)
+..+ ++.+.+++++|+|-+-+ | .+.....+.+ |++ ...|.|| +| ++.++.+++.++....
T Consensus 158 v~~~---------~~~~~~~~llvvD~sS~-~-~s~pid~~~~----dvi~agsQKnlgP~G--ltvvivs~~al~~~~~ 220 (364)
T PRK12462 158 LQFP---------DAAGLPDSPLIADMSSD-F-MSRPFDVEAY----GMVYAHAQKNLGPAG--VTVAIIRRALLERVPD 220 (364)
T ss_pred EecC---------cccccCCCeEEEEcCch-h-hCCCCChHHc----cEEEeeccccCCCCc--eEEEEECHHHHhhccc
Confidence 8775 23334799999997664 2 1222333333 665 4679998 34 7788899999877653
Q ss_pred CCCcc--------cccCCC-CChHHHHHHHHHHHHhcCC--C---HHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeecee
Q 011959 338 AGPMY--------QAGTLS-GNPLAMTAGIHTLKRLKEP--G---TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 403 (474)
Q Consensus 338 ~~~~~--------~~~t~~-~~~~~~aaa~aal~~~~~~--~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~ 403 (474)
.-+.+ ..+++. .+.....+...+|+.+.++ + ..++.+++.+.+++.+.+...-+....+...+..|
T Consensus 221 ~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~m 300 (364)
T PRK12462 221 TLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTM 300 (364)
T ss_pred cCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcc
Confidence 21111 223543 3455666677888888655 3 34444455555555555432111111111122222
Q ss_pred EEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--CcceEEe--cCCcHHHHHHHHHHHHHHHhh
Q 011959 404 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~~~--~~~t~e~i~~~l~~l~~~~~~ 473 (474)
-+.| ..++.+...+|.+.+.++|+.-..+. .+.+|.+ -.++.|+++.+++-++++-++
T Consensus 301 -nv~f-----------~~~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 301 -NVAF-----------RFRQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred -eEEE-----------EcCCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 1222 12344556789999999999865442 2346665 477999999999999887653
No 370
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.77 E-value=3.3e-06 Score=88.10 Aligned_cols=231 Identities=14% Similarity=0.095 Sum_probs=135.9
Q ss_pred CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcC--------C-c------------------------
Q 011959 137 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG--------R-E------------------------ 182 (474)
Q Consensus 137 ~~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~--------~-~------------------------ 182 (474)
.+..+.++.+++++.++ +...-.||+|||+||..+|..||.... + .
T Consensus 121 ~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~ 200 (608)
T TIGR03811 121 TSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLES 200 (608)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccc
Confidence 46788999999999986 333567999999999999999986420 0 0
Q ss_pred ---------------------E-EEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC-----CHHH
Q 011959 183 ---------------------R-IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----DVSA 235 (474)
Q Consensus 183 ---------------------~-ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----d~~~ 235 (474)
- +++....-|-+..-++...|.+. .+++.+|.+ |+++
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~----------------~~vv~VpvD~~~rmd~~~ 264 (608)
T TIGR03811 201 AGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGL----------------DQVIPVPVDSNYRMDINE 264 (608)
T ss_pred cccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCc----------------ccEEEeecCCCCcCCHHH
Confidence 0 22223333444444444444321 123333322 7999
Q ss_pred HHHHHhc---CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHH---HHhCC--EEEEeccccCc-cc---C-C----C-
Q 011959 236 LENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT---KENGA--LLIFDEVMTGF-RL---A-Y----G- 297 (474)
Q Consensus 236 le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~---~~~g~--llI~DEv~~g~-r~---g-~----~- 297 (474)
|++.|++ .+..+.+|+..-...+.|.+-| +++|.++| +++|+ +|++|-+|.|+ +. . . +
T Consensus 265 L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~ 340 (608)
T TIGR03811 265 LEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPY 340 (608)
T ss_pred HHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhcccccccccc
Confidence 9988863 2223445555555556788999 88888888 77898 69999999885 21 0 0 0
Q ss_pred ------------c-------cc----cccCC-CCceee--hhhhcCCCcceEEEEecH-HHHHhhcCCCCcc--------
Q 011959 298 ------------G-------AQ----EYFGV-TPDLTT--LGKIIGGGLPVGAYGGRR-DIMEMVAPAGPMY-------- 342 (474)
Q Consensus 298 ------------~-------~~----~~~g~-~pdi~t--~sK~l~~G~~iG~~~~~~-~i~~~~~~~~~~~-------- 342 (474)
| .- ..-|+ ..|-+| .-|.+.-.++.|+++.+. ++.+.+.....+.
T Consensus 341 ~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p 420 (608)
T TIGR03811 341 DDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGADIP 420 (608)
T ss_pred chhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccccCc
Confidence 0 00 00122 245555 568877778899987764 4444443211111
Q ss_pred ---cccCCCCChHH--HHHHHHHHHHh--cC---CCHHHHHHHHHHHHHHHHHHH
Q 011959 343 ---QAGTLSGNPLA--MTAGIHTLKRL--KE---PGTYEYLNKITGELTQGIIDA 387 (474)
Q Consensus 343 ---~~~t~~~~~~~--~aaa~aal~~~--~~---~~~~~~~~~~~~~l~~~L~~~ 387 (474)
...+..++..+ +++...+++.+ .. ..++++..+..+++.+.|++.
T Consensus 421 ~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 421 ALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00122333333 44445666665 22 456667777777888877764
No 371
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.76 E-value=1.3e-05 Score=77.58 Aligned_cols=282 Identities=15% Similarity=0.186 Sum_probs=152.6
Q ss_pred HHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcC-CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCC
Q 011959 143 VLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKG 220 (474)
Q Consensus 143 ~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~-~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~ 220 (474)
++-..++++++ +.-..-....+|.+-|+++. |+..++ +.+-++.+..-|..+...+..... ..|
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~m-a~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~---------~~g---- 189 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLM-AKRVTKKKRNKFLVPKDVHPQTLDVLRTRAE---------GLG---- 189 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHH-HHHhhcCcCceEEecCCCCHHHHHHHHhhcc---------cCc----
Confidence 44445566663 22233334445555555444 444444 334445556667766655543221 112
Q ss_pred CCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEE--EeccccCc--ccCC
Q 011959 221 ATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI--FDEVMTGF--RLAY 296 (474)
Q Consensus 221 ~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI--~DEv~~g~--r~g~ 296 (474)
-++...+++|+++|++. .. +++.+++++-++.-|+.+.. +..|.+.++++|+++| +|=.-.++ .+|.
T Consensus 190 --~~i~~~~~~d~~~l~~~-~~--~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe 260 (450)
T COG0403 190 --IEIEVVDADDLDDLESA-DD--GDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGLLKPPGE 260 (450)
T ss_pred --eEEEEeccchhhhhhhc-cc--cCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhccCCccc
Confidence 24677777788888887 42 37899999876544434444 9999999999999877 45444444 3333
Q ss_pred CccccccCCCCceee-----hhhhcC-CCcceEEEEecHHHHHhhcC----------CCCcc---------------ccc
Q 011959 297 GGAQEYFGVTPDLTT-----LGKIIG-GGLPVGAYGGRRDIMEMVAP----------AGPMY---------------QAG 345 (474)
Q Consensus 297 ~~~~~~~g~~pdi~t-----~sK~l~-~G~~iG~~~~~~~i~~~~~~----------~~~~~---------------~~~ 345 (474)
++ .||++ |+=-++ ||--.|++.++++++..+-- .++.+ -.+
T Consensus 261 ~G--------ADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATS 332 (450)
T COG0403 261 FG--------ADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATS 332 (450)
T ss_pred cC--------CceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccch
Confidence 32 25542 555566 67779999999888765421 00000 011
Q ss_pred CCCCChHHHHHHHHHHH-HhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccc
Q 011959 346 TLSGNPLAMTAGIHTLK-RLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 421 (474)
Q Consensus 346 t~~~~~~~~aaa~aal~-~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~ 421 (474)
..+.|..-++.+.+..- ++-. .++-++..++..++.++|++....+ .+.....|--+.+. .
T Consensus 333 NICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~----~~~~~~fFdt~~v~-----------~ 397 (450)
T COG0403 333 NICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGV----ELVFDHFFDTFTVR-----------V 397 (450)
T ss_pred hhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCce----EeccccceeeEEEe-----------c
Confidence 12223222222221111 1211 3445566667777777777552111 11111111111111 1
Q ss_pred cchHHHHHHHHHHHHCCeEecccCCcceEEe--cCCcHHHHHHHHHHHHHHH
Q 011959 422 SETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 422 ~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~~~~ 471 (474)
+. .....+.......|+-++......+.++ =..|+++|+.+++.+....
T Consensus 398 ~~-~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 398 PE-EVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred ch-hHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 11 3345666677777887776654455444 4678999999999987653
No 372
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.71 E-value=4.5e-06 Score=84.52 Aligned_cols=128 Identities=17% Similarity=0.194 Sum_probs=90.7
Q ss_pred HHHHHHHHhhCCCCC-eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCcc-CCCCCC-CCCC
Q 011959 142 NVLAEMVISAVPSIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT-LGLPDS-PGVP 218 (474)
Q Consensus 142 ~~la~~l~~~~~~~~-~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~-~~~~~~-~g~~ 218 (474)
.+..+..++.+ +.+ ..+.+||-|.||..++. +..++++.|.++...|-+....+.++|..... .+.... .|+.
T Consensus 73 ~eAqe~aA~~f-gAd~tyFvvNGTS~ank~vi~---a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ 148 (557)
T COG1982 73 KEAQELAARVF-GADHTYFVVNGTSTANKAVIN---AVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGII 148 (557)
T ss_pred HHHHHHHHHHh-CCCceEEEECCccHHHHHHHH---hhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccccc
Confidence 34444444445 555 55667888888888888 67777888888899999888888888764322 111111 1211
Q ss_pred CCCCCceEEccCCCHHHHHHHHhcCCCC-eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 219 KGATYETLTAPFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 219 ~~~~~~~~~~~~~d~~~le~~l~~~~~~-~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
.. =+.+.+++.+.+++.. ..+||.+|.+ .|.+.. +++|.+++.++++++..||.+
T Consensus 149 gg----------I~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah 204 (557)
T COG1982 149 GG----------IPLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAH 204 (557)
T ss_pred CC----------CCHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcC
Confidence 10 0789999888877665 6788888765 477777 899999999999999999999
No 373
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.71 E-value=5.6e-06 Score=90.90 Aligned_cols=274 Identities=14% Similarity=0.148 Sum_probs=149.1
Q ss_pred HHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcC--CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCC
Q 011959 142 NVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG--RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 218 (474)
Q Consensus 142 ~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~--~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~ 218 (474)
.++-+.++++++ +...+-+..++|.+.++++.. +.+.+ +++|++.+..| ..+...+..... ..|+
T Consensus 124 ~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a-~~~~~~~~~~vlv~~~~h-P~~~~v~~t~a~---------~~G~- 191 (954)
T PRK05367 124 LNFQTMVADLTGLEIANASLLDEATAAAEAMALA-KRVSKSKSNRFFVDDDVH-PQTLDVLRTRAE---------PLGI- 191 (954)
T ss_pred HHHHHHHHHHHCCChhhccccccHHHHHHHHHHh-hhhccCCCCEEEEcCccC-HHHHHHHHHHHH---------hCCC-
Confidence 456667777775 455778888899999866653 33444 36777766555 433333221100 0111
Q ss_pred CCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCc
Q 011959 219 KGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG 298 (474)
Q Consensus 219 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~ 298 (474)
++..++.++ ++ . .++++++ +..+.+..|.+.+ +++|.++|+++|+++++|-.+..... .-
T Consensus 192 -----ev~~~~~~~--d~----~--~~~~~~v-lvq~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al~~--l~ 251 (954)
T PRK05367 192 -----EVVVGDAAK--AL----D--HDDVFGV-LLQYPGTSGEVRD----YTALIAAAHARGALVAVAADLLALTL--LT 251 (954)
T ss_pred -----EEEEecCcc--CC----C--cccEEEE-EEecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhccC--CC
Confidence 233444322 11 1 2356555 4444577899988 99999999999999999985522100 00
Q ss_pred cccccCCCCceee--hhhh---cC-CCcceEEEEecHHHHHhhcCC--C--------Ccc-------------cccCCCC
Q 011959 299 AQEYFGVTPDLTT--LGKI---IG-GGLPVGAYGGRRDIMEMVAPA--G--------PMY-------------QAGTLSG 349 (474)
Q Consensus 299 ~~~~~g~~pdi~t--~sK~---l~-~G~~iG~~~~~~~i~~~~~~~--~--------~~~-------------~~~t~~~ 349 (474)
....+| .|+++ .-|. +| ||--.|++.+++++.+.+... + +.+ ...|.+.
T Consensus 252 ~pge~G--aDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNi 329 (954)
T PRK05367 252 PPGEMG--ADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNI 329 (954)
T ss_pred ChhhcC--CCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccccccccccc
Confidence 112233 36653 3453 22 344589999999887766421 0 000 0011111
Q ss_pred C-hHHHHHHHHH--HHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccc
Q 011959 350 N-PLAMTAGIHT--LKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 423 (474)
Q Consensus 350 ~-~~~~aaa~aa--l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~ 423 (474)
. ..+..+..+. +.++.. ++..+++..+..+++++|.+...+ +... .....+.+.+ +
T Consensus 330 ct~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~--~~~~--~~f~~~~~~~-------------~- 391 (954)
T PRK05367 330 CTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLE--VVHD--SFFDTLTVEV-------------G- 391 (954)
T ss_pred chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcc--cCCC--CCCCeEEEeC-------------C-
Confidence 0 1111122222 233333 345566777778888887653211 1100 0011111111 1
Q ss_pred hHHHHHHHHHHHHCCeEecccCCcceEEe--cCCcHHHHHHHHHHHH
Q 011959 424 TTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAE 468 (474)
Q Consensus 424 ~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~ 468 (474)
....++.+.|+++||.+.......++++ ...|++||+.+++.|.
T Consensus 392 -~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 392 -GDAAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -CCHHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 0236789999999999865544456654 6779999999999996
No 374
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.53 E-value=7.4e-06 Score=78.80 Aligned_cols=308 Identities=14% Similarity=0.130 Sum_probs=159.0
Q ss_pred HHHHHHHHHhhCCC-C-CeEEEeCCHHHHHHHHHHHhHhh--cC--------CcEEEEE-eCCCCCCchhHHHhcCCCCc
Q 011959 141 ENVLAEMVISAVPS-I-EMVRFVNSGTEACMGVLRLARAF--TG--------RERIIKF-EGCYHGHADPFLVKAGSGVA 207 (474)
Q Consensus 141 ~~~la~~l~~~~~~-~-~~v~~~~sGseA~~~al~~ar~~--~~--------~~~ii~~-~~~yhg~~~~~~~~~g~~~~ 207 (474)
+.++-.++.+..+. . .+-+|++||+-+|..++..||.- ++ =...|.| ..--|-+..-+....|.+..
T Consensus 143 E~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd 222 (510)
T KOG0629|consen 143 EEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTD 222 (510)
T ss_pred hHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCc
Confidence 34555555555542 2 36789999999999999998643 11 1234444 44445544444444443211
Q ss_pred cCCCCCCCCCCCCCCCceEEccCC-----CHHHHHHHHhcCCCC--eEEEEEccccCC--CCcccCCHHHHHHHHHHHHH
Q 011959 208 TLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGE--IAAIILEPVVGN--SGFIAPKPDFLNAIRRITKE 278 (474)
Q Consensus 208 ~~~~~~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~--~a~vi~ep~~~~--~G~i~~~~~~l~~l~~l~~~ 278 (474)
++..++-| ++++||+.|.+.+.+ +. ++++..-|. -|..-| |+.|+++|++
T Consensus 223 ----------------~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~P-f~vnaTaGTTV~GAFDd----L~~iadiC~k 281 (510)
T KOG0629|consen 223 ----------------HCIKVKTDERGKMIPDDLEKKILEAKAKGGVP-FFVNATAGTTVLGAFDD----LNGIADICEK 281 (510)
T ss_pred ----------------eeEEecccccCccchHHHHHHHHHHHhcCCCC-eEEEecCCceeeeccCc----HHHHHHHHHh
Confidence 12233322 689999887653222 22 333333343 366666 9999999999
Q ss_pred hCCEEEEeccccC-cccCCCccccccCCCC-ceeeh--hhhcCCCcceEEEEecHHH-HHhhcC--------CCCccccc
Q 011959 279 NGALLIFDEVMTG-FRLAYGGAQEYFGVTP-DLTTL--GKIIGGGLPVGAYGGRRDI-MEMVAP--------AGPMYQAG 345 (474)
Q Consensus 279 ~g~llI~DEv~~g-~r~g~~~~~~~~g~~p-di~t~--sK~l~~G~~iG~~~~~~~i-~~~~~~--------~~~~~~~~ 345 (474)
|++++.+|.+..| +-...-.-....|+.+ |-+|. -|-+|..++.|+++.+.+- ++.-.. ..+.+..+
T Consensus 282 ~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS 361 (510)
T KOG0629|consen 282 HKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVS 361 (510)
T ss_pred cCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecc
Confidence 9999999999965 3111000112335543 55553 5999989999998887663 222211 11111111
Q ss_pred CCCCChHHHHHHH--------HHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEe--cCC
Q 011959 346 TLSGNPLAMTAGI--------HTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT--EGP 412 (474)
Q Consensus 346 t~~~~~~~~aaa~--------aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~--~~~ 412 (474)
-=.++-.. .-+. -.++.--. +..++++-++.+||.++|++..... ...+. ..-..-+.|. .+.
T Consensus 362 ~DTgdK~i-QCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~-~l~~~--~pe~~nv~fw~vp~~ 437 (510)
T KOG0629|consen 362 YDTGDKAI-QCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFE-MLFEL--EPEHVNVCFWYVPPS 437 (510)
T ss_pred cccccchh-hcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccce-ehhcC--CCceEEEeeccCchH
Confidence 00111111 1110 00110001 3456777788999999998753211 11111 0111122221 111
Q ss_pred CcCcccccccc---hHHHHHHHHHHHHCCeEec---ccCC--cceEE---ecCCcHHHHHHHHHHHHHHHhh
Q 011959 413 VYNFEDAKKSE---TTKFARFYRGMLEEGVYFA---PSQF--EAGFT---SLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 413 ~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~---~~~~--~~~~~---~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
.+........+ ...+-.+-..|+++|.... |-+. +.+|+ +.+.+++|+|.+++.|++.-+.
T Consensus 438 lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 438 LRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred hccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 11111110001 1112345678888886543 3221 22333 4677999999999999877554
No 375
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.50 E-value=1.3e-05 Score=79.58 Aligned_cols=278 Identities=15% Similarity=0.207 Sum_probs=127.7
Q ss_pred HHHHHHHHHhhCCCCCeE--EEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCC
Q 011959 141 ENVLAEMVISAVPSIEMV--RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 218 (474)
Q Consensus 141 ~~~la~~l~~~~~~~~~v--~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~ 218 (474)
.-++-..+++++ +.+-+ -+..+++.+-|+++...|...++.+.+....+-|+.+...+...... .+
T Consensus 112 lfe~Qs~i~eLT-GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~---------~g-- 179 (429)
T PF02347_consen 112 LFEYQSMICELT-GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAP---------LG-- 179 (429)
T ss_dssp HHHHHHHHHHHH-TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCH---------CC--
T ss_pred HHHHHHHHHHhh-CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhh---------CC--
Confidence 346777788777 55543 34455665566554433443333234555567777666554432210 11
Q ss_pred CCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCC
Q 011959 219 KGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (474)
Q Consensus 219 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (474)
.+++.++.++-.... .+++++|++..++ .-|.+.+ +++|.++++++|+++|+ -+- . -.+..
T Consensus 180 ----~~iv~~~~~~~~~~d------~~~~a~v~vq~Pn-~~G~~ed----~~~i~~~~h~~gal~~~-~ad--~~aL~~l 241 (429)
T PF02347_consen 180 ----IEIVEVPLDEDGTTD------DDDTAAVMVQNPN-TFGVFED----IKEIADIAHAAGALVIV-GAD--PNALGGL 241 (429)
T ss_dssp ----EEEEEE-BBTTCSB-------STTEEEEEEESS--TTSB--T----HHHHHHHHHHTT-EEEE-CGG--CCGCCTC
T ss_pred ----eEEEEecccccCCcc------ccCeEEEEeecCC-CCceEee----HHHHHHHHHHcCCEEEE-ecC--HHHHhCc
Confidence 134444433210000 3589998887654 4577776 99999999999999886 222 1 11111
Q ss_pred ccccccCCCCceee-hhhhcC-----CCcceEEEEecHHHHHhhcC----------CCCcc---------------cccC
Q 011959 298 GAQEYFGVTPDLTT-LGKIIG-----GGLPVGAYGGRRDIMEMVAP----------AGPMY---------------QAGT 346 (474)
Q Consensus 298 ~~~~~~g~~pdi~t-~sK~l~-----~G~~iG~~~~~~~i~~~~~~----------~~~~~---------------~~~t 346 (474)
-....+| .||++ .+|.|| ||--.|++.++++++..+-. .++.+ -.+.
T Consensus 242 ~~Pge~G--ADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSN 319 (429)
T PF02347_consen 242 KSPGEYG--ADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSN 319 (429)
T ss_dssp --GGGGT---SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT-
T ss_pred CChhhcC--ccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhh
Confidence 1112233 36653 456554 34568888889887765531 01111 0122
Q ss_pred CCCChHHHH-HHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCccccccc
Q 011959 347 LSGNPLAMT-AGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 422 (474)
Q Consensus 347 ~~~~~~~~a-aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~ 422 (474)
.+.|...++ ++...+..+-. .++-++...+..++.++|.+. ...++. ...|+-+.+. ...
T Consensus 320 IctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~~~-----~~~f~e~v~~----------~~~ 383 (429)
T PF02347_consen 320 ICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLPFD-----NPFFFEFVVV----------FSK 383 (429)
T ss_dssp --SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBECSS-----SSSBSSEEEE----------ESS
T ss_pred hhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccC-----CCCceeeeee----------cCC
Confidence 334444433 22222333322 345566777788888888765 111111 1111111111 111
Q ss_pred chHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHH
Q 011959 423 ETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAA 467 (474)
Q Consensus 423 ~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l 467 (474)
+ ....++.+.+...|+.........+.+ .=.+|+||||.++++|
T Consensus 384 ~-~~~~~l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 384 D-KEVEELLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp --HHHHHHHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred c-HHHHHHHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 1 333446666666676555444344434 3467899999999875
No 376
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.44 E-value=0.00016 Score=68.36 Aligned_cols=313 Identities=15% Similarity=0.069 Sum_probs=159.8
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHh---hcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA---FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 214 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~---~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 214 (474)
+.....|++.+.+.+ +.+.++-+.-|-.|=...+...+. ..++.+.+++.+.|+-.+.+.....|..+..+..+.
T Consensus 78 srs~~~L~~avkdif-Gfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~e- 155 (471)
T COG3033 78 SRSYYALADAVKDIF-GFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDE- 155 (471)
T ss_pred cccHHHHHHHHHHhc-CceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccccccc-
Confidence 444567888888888 677888887666554443333222 223356666666555555555555554332221111
Q ss_pred CCCCCCCCCceEEccCC---CHHHHHHHHhcCC-CCeEEEEEccccC-CCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 215 PGVPKGATYETLTAPFN---DVSALENLFENNK-GEIAAIILEPVVG-NSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 215 ~g~~~~~~~~~~~~~~~---d~~~le~~l~~~~-~~~a~vi~ep~~~-~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
.....+..||. |++.|+++|++-+ +++..|++.-.+| .+|.-+. -.-++++++||++||+.++.|-+.
T Consensus 156 ------a~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVS-m~n~r~v~~ia~ky~ipvv~Da~R 228 (471)
T COG3033 156 ------AFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVS-MANMKAVYEIAKKYDIPVVMDAAR 228 (471)
T ss_pred ------cccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcch-HHhHHHHHHHHHHcCCcEEeehhh
Confidence 11122334442 8999999998754 3455444433333 3555444 444999999999999999999766
Q ss_pred cCcccCCCcccc-ccCC--------------CCceeehh-hhcCCC-cceEEE-EecHH----HHHhhcCCCCc-ccccC
Q 011959 290 TGFRLAYGGAQE-YFGV--------------TPDLTTLG-KIIGGG-LPVGAY-GGRRD----IMEMVAPAGPM-YQAGT 346 (474)
Q Consensus 290 ~g~r~g~~~~~~-~~g~--------------~pdi~t~s-K~l~~G-~~iG~~-~~~~~----i~~~~~~~~~~-~~~~t 346 (474)
.- ....|..+ .-|- ..|-.++| |- -| ..+|.+ +.+.+ +.+..+...-. ..+.|
T Consensus 229 fa--ENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KK--D~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~t 304 (471)
T COG3033 229 FA--ENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKK--DGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPT 304 (471)
T ss_pred hh--hhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccc--cceeccccEEEecCccHHHHHHHHHhheEeeccccc
Confidence 20 01011111 0111 11223333 21 13 247666 44444 44433321111 12234
Q ss_pred CCCC-hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchH
Q 011959 347 LSGN-PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 425 (474)
Q Consensus 347 ~~~~-~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 425 (474)
|++- -=.+.+....|...-+.+++++-.+..++|.++|.+. +++..-+..|.-..++..+ +.+....+.-
T Consensus 305 YGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~----GVpi~~paGGHavfvda~~-----~lphip~eqF 375 (471)
T COG3033 305 YGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA----GVPIVQPAGGHAVFVDAGK-----FLPHIPAEQF 375 (471)
T ss_pred cCcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc----CCeeEecCCCceEEeehhh-----hcCCCChhhC
Confidence 4431 1123333334544445677777778888999998875 4444444444433333221 1111111111
Q ss_pred HHHHHHHHHH-HCCeEecccC-------C----------cceEE---ecCCcHHHHHHHHHHHHHHHh
Q 011959 426 KFARFYRGML-EEGVYFAPSQ-------F----------EAGFT---SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 426 ~~~~~~~~l~-~~Gv~v~~~~-------~----------~~~~~---~~~~t~e~i~~~l~~l~~~~~ 472 (474)
-.+.|+-.|. +.||-..-.| . ..+|+ ..+-|.+++|..++.++++.+
T Consensus 376 paqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 376 PAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred cHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh
Confidence 1234443333 4465432211 0 12344 256699999999999988764
No 377
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.42 E-value=4.9e-07 Score=86.70 Aligned_cols=226 Identities=19% Similarity=0.274 Sum_probs=54.8
Q ss_pred ccCCCC--CHHHHHHHHHHHHhcCCCCC------CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCc
Q 011959 111 AIIGHA--DDQVLAALGETMKKGTSFGA------PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 182 (474)
Q Consensus 111 ~~lG~~--~p~v~~a~~~~~~~~~~~~~------~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~ 182 (474)
.+||-+ ++++.+++.+.+......-+ --.-...+.+.++..+ +.|..+++|+...|+..++. .+..++
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt-gAeaA~VvNnnaAAv~L~l~---~la~~~ 86 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT-GAEAALVVNNNAAAVLLALN---TLAKGK 86 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccc---cccccc
Confidence 467764 68888888877655321111 0111234445555555 78899999999999988887 444455
Q ss_pred EEEEEeCC---CCCC--chhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE-Ecc-c
Q 011959 183 RIIKFEGC---YHGH--ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII-LEP-V 255 (474)
Q Consensus 183 ~ii~~~~~---yhg~--~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi-~ep-~ 255 (474)
+||+..+- +-|. ....+..+|.....++.. ..-.+++.++.|.+ ++++++ +-+ +
T Consensus 87 EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt----------------N~t~~~Dye~AI~e---~Ta~ll~Vh~Sn 147 (367)
T PF03841_consen 87 EVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT----------------NRTHLSDYEKAITE---NTAALLKVHTSN 147 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccc----------------cccccccccccccc---cccccccccccc
Confidence 56554331 1111 112222233221111100 00146777888874 566554 443 3
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc---C---CCccccccCCCCceeehh--hhcCCCcceEEEE
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL---A---YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYG 326 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~---g---~~~~~~~~g~~pdi~t~s--K~l~~G~~iG~~~ 326 (474)
+...|+.-.++ ++++.+++++|++++|+|-.-..+ .. | ..-..+......|++||| |.+|| -..|.++
T Consensus 148 ~~i~GFt~~~~--~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGG-PQaGiI~ 224 (367)
T PF03841_consen 148 FRIQGFTGEVS--LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGG-PQAGIIV 224 (367)
T ss_dssp ---------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS--S-EEEE
T ss_pred ccccccccccc--HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCC-CCeEEEE
Confidence 33344433332 899999999999999999765222 11 1 122233444567999987 77774 4578889
Q ss_pred ecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhc
Q 011959 327 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 365 (474)
Q Consensus 327 ~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 365 (474)
|++++++.+++. -..-.+-..-+.+++..++|+...
T Consensus 225 Gkk~lI~~lk~~---pl~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 225 GKKELIEKLKKH---PLGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp EEHHHHHHHHHH---HHTTT-B--HHHHHHHHHHHHH--
T ss_pred eCHHHHHHHhhC---CCcceEeeCHHHHHHHHHHHHHHH
Confidence 999999998731 122345667888888889988654
No 378
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.40 E-value=4.4e-05 Score=72.75 Aligned_cols=200 Identities=23% Similarity=0.301 Sum_probs=110.8
Q ss_pred CCHHHHHHHHHH-HHh-----cCCCCCCCHHHHHHHHHHHhhCCCCCeEEE---eCCHHHHHHHHHHHhHhhcCCcEEEE
Q 011959 116 ADDQVLAALGET-MKK-----GTSFGAPCLLENVLAEMVISAVPSIEMVRF---VNSGTEACMGVLRLARAFTGRERIIK 186 (474)
Q Consensus 116 ~~p~v~~a~~~~-~~~-----~~~~~~~~~~~~~la~~l~~~~~~~~~v~~---~~sGseA~~~al~~ar~~~~~~~ii~ 186 (474)
+..+|++|+++. +.. .+.||+.+..++.|.+-+++.+ +.|..++ ..|||.|+..+|.- .+.++++++.
T Consensus 25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vf-gaE~ALVRpq~vSGTHAi~~~Lfg--~LrpGD~ll~ 101 (403)
T PF06838_consen 25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVF-GAEDALVRPQFVSGTHAIALALFG--VLRPGDELLS 101 (403)
T ss_dssp HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHC-T-SEEEEETTS-SHHHHHHHHHHH--H--TT-EEEE
T ss_pred HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHh-CchhhhhcccccchHHHHHHHHHh--cCCCCCeEEE
Confidence 345677777763 221 1457778888999999999999 6676665 35899999999984 3445677776
Q ss_pred EeC-CCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC-----CHHHHHHHHhcCCCCeEEEEEccccCCCC
Q 011959 187 FEG-CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGEIAAIILEPVVGNSG 260 (474)
Q Consensus 187 ~~~-~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (474)
..+ .|. .....+...|.+ .|-.+..+-....++.. |++.+++.++ +++++|.+--.-|=.-
T Consensus 102 ~tG~PYD-TL~~VIG~~g~~---------~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~---~~tk~v~IQRSrGYs~ 168 (403)
T PF06838_consen 102 ITGKPYD-TLEEVIGIRGNG---------PGSLKEFGIKYREVPLTEDGTIDWEAIKKALK---PNTKMVLIQRSRGYSW 168 (403)
T ss_dssp SSSS--C-CHHHHHTSSSSS---------SSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH---TTEEEEEEE-S-TTSS
T ss_pred cCCCchh-hHHHHhCCCCCC---------CCChHHhCceeEEEeecCCCCcCHHHHHHhhc---cCceEEEEecCCCCCC
Confidence 655 342 222223222221 11111111122333321 7999999998 3678877743322211
Q ss_pred cccCCHHHHHHHHHHHHHh--CCEEEEeccccCc-ccCCCccccccCCCCcee--ehhhhcCCCc-c-eEEEEecHHHHH
Q 011959 261 FIAPKPDFLNAIRRITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGL-P-VGAYGGRRDIME 333 (474)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~~G~-~-iG~~~~~~~i~~ 333 (474)
.-.-.-+-++++.++.++. ++++++|..|..| -.- |-..+-.|++ +|=|-.|||+ | -||+++++++++
T Consensus 169 R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~-----EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe 243 (403)
T PF06838_consen 169 RPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ-----EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVE 243 (403)
T ss_dssp S----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS------GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc-----CccccchhheeccceeCCCCCccCcCCEEechHHHHH
Confidence 1111222255555555554 7899999999887 332 2233456777 7889999996 5 566699999998
Q ss_pred hhc
Q 011959 334 MVA 336 (474)
Q Consensus 334 ~~~ 336 (474)
...
T Consensus 244 ~~a 246 (403)
T PF06838_consen 244 RAA 246 (403)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 379
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.38 E-value=8e-05 Score=75.23 Aligned_cols=298 Identities=17% Similarity=0.238 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhc-----CCcEEEEEeCCCCCCchhHHHhcCCCCccCCCC
Q 011959 139 LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (474)
Q Consensus 139 ~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~-----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (474)
++..+|.+.|++.. +.|.+-| -|||.++=.+-++..|+|. +.+.|....-+-||.......+.|..+..+...
T Consensus 582 ~lf~~Le~~Lc~iT-G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~ 660 (1001)
T KOG2040|consen 582 QLFTELEKDLCEIT-GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCD 660 (1001)
T ss_pred HHHHHHHHHhheee-cccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeecc
Confidence 44567888888887 5666655 6899998888888887873 346677777799998777777777655433222
Q ss_pred CCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc----
Q 011959 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV---- 288 (474)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv---- 288 (474)
....+ |+.+|++.-++|.++.+++++.-+... |+.. ++ +++++++.++||--+.+|-+
T Consensus 661 ~~G~i--------------d~~dLk~kaekh~~~Laa~MvTYPST~-GvfE--~~-i~d~cd~iHehGGQVYlDGANMNA 722 (1001)
T KOG2040|consen 661 ANGNI--------------DMVDLKAKAEKHKDNLAALMVTYPSTH-GVFE--EG-IDDICDIIHEHGGQVYLDGANMNA 722 (1001)
T ss_pred CCCCc--------------cHHHHHHHHHHhhhhhheeEEeccccc-cccc--cc-HHHHHHHHHhcCCEEEecCCCccc
Confidence 11111 789999988888888999888755333 4332 23 89999999999999999975
Q ss_pred ccCc-ccCCCcc-ccccCCCCceeehhhhc----CC-CcceEEEEecHHHHHhhcCCCCcc---------cccCCC----
Q 011959 289 MTGF-RLAYGGA-QEYFGVTPDLTTLGKII----GG-GLPVGAYGGRRDIMEMVAPAGPMY---------QAGTLS---- 348 (474)
Q Consensus 289 ~~g~-r~g~~~~-~~~~g~~pdi~t~sK~l----~~-G~~iG~~~~~~~i~~~~~~~~~~~---------~~~t~~---- 348 (474)
|.|+ |.|..++ ..|++ +-|+| || |-.+|-+..++.+...+-. .++. -.++.+
T Consensus 723 qVGlc~pGd~GaDV~HLN-------LHKTFcIPHGGGGPg~gPIgVK~HLapfLP~-HpVvs~~~~~~~~~~gsVsaaP~ 794 (1001)
T KOG2040|consen 723 QVGLCRPGDIGADVCHLN-------LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSPGRPEDTSPVGSVSAAPW 794 (1001)
T ss_pred eecccCCccccccceeec-------ccceeeecCCCCCCCCCccchhhhccccCCC-CCccCCCCCCCCCCccceeccCC
Confidence 4677 6664332 22222 34544 33 3446666666666554431 1111 011222
Q ss_pred CChHHHHHHHHHHHHhcCCCHH---HHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchH
Q 011959 349 GNPLAMTAGIHTLKRLKEPGTY---EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 425 (474)
Q Consensus 349 ~~~~~~aaa~aal~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 425 (474)
++........+.++.+-..++. +-..-+..|+.++|+.- +.+. .....| .++-+|.-+ . ++.+.....
T Consensus 795 Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h---Ykil-~~~~~~-~vaHEFIlD-~---r~fK~~agi 865 (1001)
T KOG2040|consen 795 GSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH---YKIL-FRGENG-LVAHEFILD-L---RPFKKTAGI 865 (1001)
T ss_pred CcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc---ccee-EecCCc-ceeeeeeee-c---hhhccccCC
Confidence 2333344445666766553332 22334567777777653 2322 112222 334444211 1 112222223
Q ss_pred HHHHHHHHHHHCCeEecccCCc---ceEE-e-cCCcHHHHHHHHHHHHHHHh
Q 011959 426 KFARFYRGMLEEGVYFAPSQFE---AGFT-S-LAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 426 ~~~~~~~~l~~~Gv~v~~~~~~---~~~~-~-~~~t~e~i~~~l~~l~~~~~ 472 (474)
....++++|.+.|+..-....+ .+.+ + -.-+.+++|++++++-.+-+
T Consensus 866 eavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIre 917 (1001)
T KOG2040|consen 866 EAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIRE 917 (1001)
T ss_pred cHHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHH
Confidence 4467899999999865433322 2233 2 23367899999999865543
No 380
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.35 E-value=0.00038 Score=75.74 Aligned_cols=272 Identities=9% Similarity=0.099 Sum_probs=142.9
Q ss_pred HHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhHhhcC-CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCC
Q 011959 142 NVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK 219 (474)
Q Consensus 142 ~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar~~~~-~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~ 219 (474)
-++-..++++++ +...+-+..+++.+-|++++..|...+ +++|++. .+-|..+...+..... ..|+
T Consensus 112 ~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~-~~~hP~~~~v~~t~a~---------~~g~-- 179 (939)
T TIGR00461 112 LNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVA-KDLHPQTKSVLHTRAK---------PFGI-- 179 (939)
T ss_pred HHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEEC-CCCCcchHHHHHHHHH---------hcCc--
Confidence 466677777774 333446667777777755543222222 3565554 4555544433321110 1111
Q ss_pred CCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc---Cc-ccC
Q 011959 220 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT---GF-RLA 295 (474)
Q Consensus 220 ~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~---g~-r~g 295 (474)
+++.+ |+++|++.+ +++++++.. ++..|.+.. +++|.++++++|.++|++--.. ++ ++|
T Consensus 180 ----~v~~~---~~~~l~~~~-----~~~~v~~q~-Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~~Pg 242 (939)
T TIGR00461 180 ----EVIVV---DCSDIKKAV-----DVFGCLLQY-PATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLTPPG 242 (939)
T ss_pred ----EEEEE---cHHHHhhcC-----CEEEEEEEC-CCCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcCCHH
Confidence 23333 555555443 356665533 345677776 9999999999999999865552 22 233
Q ss_pred CCccccccCCCCcee-ehhhhcC-----CCcceEEEEecHHHHHhhcCC----------CCccc---------------c
Q 011959 296 YGGAQEYFGVTPDLT-TLGKIIG-----GGLPVGAYGGRRDIMEMVAPA----------GPMYQ---------------A 344 (474)
Q Consensus 296 ~~~~~~~~g~~pdi~-t~sK~l~-----~G~~iG~~~~~~~i~~~~~~~----------~~~~~---------------~ 344 (474)
. +| .||+ ..+|.|| ||--.|++.++++++..+-.. ++.+. .
T Consensus 243 e------~G--aDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAt 314 (939)
T TIGR00461 243 H------YG--ADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKAT 314 (939)
T ss_pred H------cC--CcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccC
Confidence 2 23 3554 2345444 344488888888877665310 00000 0
Q ss_pred cCCCCChHHHHH-HHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCccccc
Q 011959 345 GTLSGNPLAMTA-GIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 420 (474)
Q Consensus 345 ~t~~~~~~~~aa-a~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~ 420 (474)
+..+.+...++. +...+..+-.+ ++-+++..+..++.++|.+.+.+ +.. ...|--+.+.-
T Consensus 315 SNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~--~~~----~~fF~~~~v~~---------- 378 (939)
T TIGR00461 315 SNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHE--LIN----KTWFDTLTVKV---------- 378 (939)
T ss_pred cchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCc--ccC----CCccceEEEEe----------
Confidence 011112222221 11112333323 33455666777778777764221 111 11111111110
Q ss_pred ccchHHHHHHHHHHHHCCeEecccCCcceEE--ecCCcHHHHHHHHHHHH
Q 011959 421 KSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 468 (474)
Q Consensus 421 ~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~ 468 (474)
+ .....++.+.++++||.+.....+.+.+ .-..|++||+.+++.|.
T Consensus 379 -~-~~~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 379 -G-NGISSELLKAAEEFNINLRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -C-CCCHHHHHHHHHHCCCeeeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 0 0113678899999999988654444444 46789999999999984
No 381
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.29 E-value=3.5e-05 Score=71.26 Aligned_cols=273 Identities=18% Similarity=0.196 Sum_probs=142.3
Q ss_pred EeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcC-CCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHH
Q 011959 160 FVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG-SGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (474)
Q Consensus 160 ~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g-~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~ 238 (474)
-+-||+.|+..+-.....+..+..|-+..|.+..+ .......| ..+...++.+.. ...+ |++.+..
T Consensus 104 QslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH-~~if~~aGf~tv~~Y~yWd~~---------~k~~---d~e~~Ls 170 (410)
T KOG1412|consen 104 QSLSGTGALRIAADFLATFYNKNTVYVSNPTWENH-HAIFEKAGFTTVATYPYWDAE---------NKCV---DLEGFLS 170 (410)
T ss_pred eeccccchhhhhHHHHHHhcccceeEecCCchhHH-HHHHHHcCCceeeeeeeecCC---------Ccee---cHHHHHH
Confidence 45689999988887554555566666666665443 33333333 111111111100 1111 6777777
Q ss_pred HHhcCCCCeEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC----Ccccccc---CCCCcee
Q 011959 239 LFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY----GGAQEYF---GVTPDLT 310 (474)
Q Consensus 239 ~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~----~~~~~~~---g~~pdi~ 310 (474)
.|+..|+. ..+++.. -+|++| +-|..|.+..|.+.-++.+.+-++|-+|-||-.|. .++..++ |. +-++
T Consensus 171 dl~~APe~-si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~-e~fv 247 (410)
T KOG1412|consen 171 DLESAPEG-SIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGF-ELFV 247 (410)
T ss_pred HHhhCCCC-cEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCC-eEEE
Confidence 77655433 3444433 456666 57778889999999999999999999999993332 2333332 21 1133
Q ss_pred --ehhhhcC-CCcceEEE--Ee-cHHHHHhhcCCCCcccccCCCCCh-HHHHHHHHHHHHhcCCCH-----------HHH
Q 011959 311 --TLGKIIG-GGLPVGAY--GG-RRDIMEMVAPAGPMYQAGTLSGNP-LAMTAGIHTLKRLKEPGT-----------YEY 372 (474)
Q Consensus 311 --t~sK~l~-~G~~iG~~--~~-~~~i~~~~~~~~~~~~~~t~~~~~-~~~aaa~aal~~~~~~~~-----------~~~ 372 (474)
+|+|-+| -+-|+|-+ ++ ++.++..+...-....-++++.+| .++......| ..+++ -.+
T Consensus 248 ~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL---~tP~lre~W~~sik~MssR 324 (410)
T KOG1412|consen 248 CQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVL---STPELREQWIQSIKTMSSR 324 (410)
T ss_pred EhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence 5999998 46788876 22 444444433110112233444332 2333333333 33322 234
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeeE-EeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHH-HCCeEecccCCcceE
Q 011959 373 LNKITGELTQGIIDAGKKAGHAIC-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQFEAGF 450 (474)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~-v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~ 450 (474)
+.+++..|++.|..+. ..+-..+ +...|+| . +..-. ..-++.|. ++.|++.+.| .+.
T Consensus 325 I~~MR~aLrd~L~aL~-TPGtWDHI~~QiGMF-S--yTGLt---------------p~qV~~li~~h~vyLl~~G--RIn 383 (410)
T KOG1412|consen 325 IKKMRTALRDHLVALK-TPGTWDHITQQIGMF-S--YTGLT---------------PAQVDHLIENHKVYLLSDG--RIN 383 (410)
T ss_pred HHHHHHHHHHHHHhcC-CCCcHHHHHhhccce-e--ecCCC---------------HHHHHHHHHhceEEEecCC--cEe
Confidence 4444555555555442 1111111 3334433 2 21110 12345555 5578887765 222
Q ss_pred EecCCcHHHHHHHHHHHHHHHhh
Q 011959 451 TSLAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 451 ~~~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+ ...+...+|....+|+++++.
T Consensus 384 i-sGLN~~NveyVAkAIde~Vr~ 405 (410)
T KOG1412|consen 384 I-SGLNMKNVEYVAKAIDETVRA 405 (410)
T ss_pred e-eccccccHHHHHHHHHHHHHh
Confidence 3 234556677777777777654
No 382
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.15 E-value=0.0001 Score=69.26 Aligned_cols=206 Identities=20% Similarity=0.219 Sum_probs=112.3
Q ss_pred CeEEEeeccCEEEEcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcC-----CCCCCCHHHHHHHHHHHh-hCC--
Q 011959 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-----SFGAPCLLENVLAEMVIS-AVP-- 153 (474)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-----~~~~~~~~~~~la~~l~~-~~~-- 153 (474)
|..+-=|-|+| .|.+|+.|+ -|.|++|=++.+.... .-++..+....-++.+-. -.|
T Consensus 52 ~~KiNLgvGaY-Rdd~gKp~v--------------L~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~i 116 (427)
T KOG1411|consen 52 PKKINLGVGAY-RDDNGKPYV--------------LPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVI 116 (427)
T ss_pred cceeeecccce-ecCCCCeee--------------eHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhh
Confidence 66677788887 456777764 1556665443333211 111223332222222211 111
Q ss_pred CCCeEEE--eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC
Q 011959 154 SIEMVRF--VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231 (474)
Q Consensus 154 ~~~~v~~--~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 231 (474)
..+++.. +-|||.|+..+-.....+-...+|.+.+|++-.+ .......|. .+..+.|-
T Consensus 117 k~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh-~~if~~ag~-------------------~~~~yrYy 176 (427)
T KOG1411|consen 117 KEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNH-KNIFKDAGL-------------------PVKFYRYY 176 (427)
T ss_pred hccceeEEEeccCcchhhHHHHHHHhhccccceeecCCccccc-CccccccCc-------------------ceeeeeec
Confidence 1234443 4588888887776554555566777777765221 111111111 12222221
Q ss_pred -------CHHHHHHHHhcCCCCeEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCC----cc
Q 011959 232 -------DVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG----GA 299 (474)
Q Consensus 232 -------d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~----~~ 299 (474)
|.+.+-+-+.+.++. ..|++-. -+|++| +-|..+.+++|.++-++.+.+-++|-+|-||-.|.. ++
T Consensus 177 d~~t~gld~~g~ledl~~~p~g-s~ilLhaCaHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~a 254 (427)
T KOG1411|consen 177 DPKTRGLDFKGMLEDLGEAPEG-SIILLHACAHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQA 254 (427)
T ss_pred cccccccchHHHHHHHhcCCCC-cEEEeehhhcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHH
Confidence 555554445544433 3444443 445555 678888899999999999999999999999933321 11
Q ss_pred cccc---CCCCcee--ehhhhcC-CCcceEEE
Q 011959 300 QEYF---GVTPDLT--TLGKIIG-GGLPVGAY 325 (474)
Q Consensus 300 ~~~~---g~~pdi~--t~sK~l~-~G~~iG~~ 325 (474)
..+| |... ++ +++|-+| -|-|+|++
T Consensus 255 vR~F~~~g~~~-~laQSyAKNMGLYgERvGa~ 285 (427)
T KOG1411|consen 255 VRLFVEDGHEI-LLAQSYAKNMGLYGERVGAL 285 (427)
T ss_pred HHHHHHcCCce-Eeehhhhhhcchhhhcccee
Confidence 1122 2211 22 6889988 47788887
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.06 E-value=0.00055 Score=66.60 Aligned_cols=302 Identities=12% Similarity=0.071 Sum_probs=145.8
Q ss_pred HHHHHHHHHhhCC--CCCeEEEeCCHHH-HHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCC
Q 011959 141 ENVLAEMVISAVP--SIEMVRFVNSGTE-ACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (474)
Q Consensus 141 ~~~la~~l~~~~~--~~~~v~~~~sGse-A~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~ 217 (474)
...|+..+.+..+ ....++..+-.|- ++...+...| ...+.+.|+...--|-...-++...|..+..++...
T Consensus 58 tn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~-~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~---- 132 (389)
T PF05889_consen 58 TNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALR-MRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVL---- 132 (389)
T ss_dssp HHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHH-HHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEE----
T ss_pred HHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHh-cccCCceEEEeeccccchHHHHHhcCCeEEEeeccC----
Confidence 3444444455554 3456777764443 2222333233 223445555555445444555555555333211100
Q ss_pred CCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccC-
Q 011959 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA- 295 (474)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g- 295 (474)
..+.+.. |++.+|+.+++.+.+..+.++.......+...+ + +.+|.++|++||+..|+.-+|+ + -.-
T Consensus 133 ----~~d~l~t---d~~~ie~~i~~~G~~~iLcvltttscfapr~~D--~-i~~IakiC~~~~IPhlvNnAYg-vQ~~~~ 201 (389)
T PF05889_consen 133 ----EGDELIT---DLEAIEAKIEELGADNILCVLTTTSCFAPRLPD--D-IEEIAKICKEYDIPHLVNNAYG-VQSSKC 201 (389)
T ss_dssp ----ETTEEEE---HHHHHHHHHHHHCGGGEEEEEEESSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT-HHH
T ss_pred ----CCCeeec---cHHHHHHHHHHhCCCCeEEEEEecCccCCCCCc--c-HHHHHHHHHHcCCceEEccchh-hhHHHH
Confidence 0011222 688899988765445455555544444443332 2 9999999999999999999994 3 100
Q ss_pred --CCccccccCCCCce-eehhhhcCCCcceEEE-EecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC---CC
Q 011959 296 --YGGAQEYFGVTPDL-TTLGKIIGGGLPVGAY-GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PG 368 (474)
Q Consensus 296 --~~~~~~~~g~~pdi-~t~sK~l~~G~~iG~~-~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~ 368 (474)
..-.....|..|-. -++.|=|--+..-+-+ ...+..++.+.. .+-+-. +.+| ..-. ..+|..+-. ..
T Consensus 202 ~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~---~YpGRa-s~sp-~ld~-~itLl~LG~~g~~~ 275 (389)
T PF05889_consen 202 MHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSK---EYPGRA-SASP-SLDL-FITLLSLGCTGYGA 275 (389)
T ss_dssp HHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHH---TSHSHB-TSHH-HHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHH---Hhhhhh-hccc-chHH-HHHHHHHhhhHHHH
Confidence 00000113444433 3677866411111222 235566776652 111111 1111 1122 222222222 45
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCC-eeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeE----ecc
Q 011959 369 TYEYLNKITGELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY----FAP 443 (474)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~~~~~~~-~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~----v~~ 443 (474)
++....+...+++++|+++..+++- ..+.+...-.+.+.+..- .. . .......|...|..+||. +.+
T Consensus 276 ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l--~~---~---~~k~~~~lgs~Lf~R~VsG~RvV~~ 347 (389)
T PF05889_consen 276 LLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTL--YE---I---SQKDGTFLGSMLFKRGVSGIRVVTP 347 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTC--CT---C---CSSHHHHHHHHHHHTTEESSEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccc--hh---h---ccchhhhHHHHHHhCCcccceeecc
Confidence 6666777888889999888777662 222223333445544211 00 0 002235678888899763 222
Q ss_pred cC---------C--cceEE--ecCCcHHHHHHHHHHHHHHHh
Q 011959 444 SQ---------F--EAGFT--SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 444 ~~---------~--~~~~~--~~~~t~e~i~~~l~~l~~~~~ 472 (474)
.+ + +++.+ .+..++||+|.++++|+++++
T Consensus 348 ~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 348 GGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred CCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 21 1 12233 367799999999999999875
No 384
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.06 E-value=0.00046 Score=67.66 Aligned_cols=334 Identities=16% Similarity=0.154 Sum_probs=173.3
Q ss_pred cCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhc-----CCCCCCCHHHHHHHHHHHhhCCCCCe--EEEeCCHHHHH
Q 011959 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-----TSFGAPCLLENVLAEMVISAVPSIEM--VRFVNSGTEAC 168 (474)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~la~~l~~~~~~~~~--v~~~~sGseA~ 168 (474)
.||+.-+..+++. .+.+ +++..+-+.+.+.+. .-|+.....+.+....++.++.+.+. -.-|.||||+.
T Consensus 76 ld~~~~~~~vS~~--v~~~--~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~ 151 (491)
T KOG1383|consen 76 LDGNPRLGLASGV--VYWG--EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESG 151 (491)
T ss_pred cCCCcccCeeeEE--EecC--CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHH
Confidence 4455333333432 4444 555555555555542 12455678888999999998864332 24577899997
Q ss_pred HHHHHHhHhhc----C--CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhc
Q 011959 169 MGVLRLARAFT----G--RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (474)
Q Consensus 169 ~~al~~ar~~~----~--~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (474)
..+.+.-|... + +..++... .-|...+-+...-+ +....++..++ .+.+ |+..+.+.+.+
T Consensus 152 l~~~k~~~~~r~~~k~I~~p~iv~~~-~v~~a~eK~a~yf~--v~l~~V~~~~~--------~~~~---D~~k~~~~i~e 217 (491)
T KOG1383|consen 152 LAAKKSYRNRRKAQKGIDKPNIVTPQ-NVHAAFEKAARYFE--VELREVPLDEG--------DYRV---DPGKVVRMIDE 217 (491)
T ss_pred HHHHHHHHHHHHhccCCCCccccchH-HHHHHHHHHHhhEE--EEEEeeecccc--------ceEe---cHHHHHHHhcc
Confidence 77776433221 1 22333321 12221111111000 00000111111 1122 78888888875
Q ss_pred CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHH-hCCEEEEeccccCc-ccCCCccccccCCC----Cceeehhhhc
Q 011959 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-NGALLIFDEVMTGF-RLAYGGAQEYFGVT----PDLTTLGKII 316 (474)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~-~g~llI~DEv~~g~-r~g~~~~~~~~g~~----pdi~t~sK~l 316 (474)
++.+++.+-.+-+.|.+-+ .++|.++.-+ +++.+.+|-.-.|| -.........||+. +-+.+-+.-+
T Consensus 218 ---Nti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKY 290 (491)
T KOG1383|consen 218 ---NTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKY 290 (491)
T ss_pred ---ceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeecccee
Confidence 6888888877777888888 8999999998 99999999999999 54111222234442 2233334223
Q ss_pred C---CCcceEEEEec-HHH-HHhhcC----CCCcccccCCCCCh--HHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHH
Q 011959 317 G---GGLPVGAYGGR-RDI-MEMVAP----AGPMYQAGTLSGNP--LAMTAGIHTLKRLKEPG---TYEYLNKITGELTQ 382 (474)
Q Consensus 317 ~---~G~~iG~~~~~-~~i-~~~~~~----~~~~~~~~t~~~~~--~~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~ 382 (474)
| .| +||++-+ +++ .+.+.- .+..+-..|..++- .-.++..+++-.+-.++ ..+++.+..+.|++
T Consensus 291 Gl~~~G--~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~e 368 (491)
T KOG1383|consen 291 GLAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLRE 368 (491)
T ss_pred eeeecC--cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 3 23 7787543 332 222210 01122222333322 22333344443333344 44556677788888
Q ss_pred HHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCc---ceEEecCCcHHH
Q 011959 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE---AGFTSLAHSSDD 459 (474)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~---~~~~~~~~t~e~ 459 (474)
+++++. ... +-+...+ .+...+... ...-++.+.|.+.|-.+..-..+ ++++...+..++
T Consensus 369 gie~i~-~i~----i~gkp~v-s~~~~~s~~-----------~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~ 431 (491)
T KOG1383|consen 369 GIENIK-GIK----IVGKPLV-SFILFGSND-----------VNIFELSDLLRKKGWILNALQFPAAIHICVTRVHARED 431 (491)
T ss_pred hhhccc-cce----ecCCCcE-EEEEccCCc-----------cchhhhhHHHHhcCcCccccCCCCceEEEEEeeeccHH
Confidence 888742 111 1122222 222221111 11246788999999877654433 344445555544
Q ss_pred -HHHHHHHHHHHHhh
Q 011959 460 -IQHTITAAEKVLRQ 473 (474)
Q Consensus 460 -i~~~l~~l~~~~~~ 473 (474)
.|+++.-+++++.+
T Consensus 432 ~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 432 VADRFVADIRKVVEE 446 (491)
T ss_pred HHHHHHHHHHHHHHH
Confidence 57777778777765
No 385
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.93 E-value=0.00019 Score=67.98 Aligned_cols=194 Identities=11% Similarity=0.059 Sum_probs=103.9
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCCcee--ehhhhcC-CCcce
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIG-GGLPV 322 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pdi~--t~sK~l~-~G~~i 322 (474)
...=+++.|+| +.|.+.- .+++.-+..+|.|=+|- .+. +..--....-||+ |+||.-| +|-|+
T Consensus 138 ~~IElVTSPNN-PDG~lr~---------~V~~g~~~k~I~D~AYY--WPh--yTpI~~~aD~DiMLFT~SK~TGHAGSR~ 203 (363)
T PF04864_consen 138 PYIELVTSPNN-PDGQLRE---------AVLNGSSGKVIHDLAYY--WPH--YTPITAPADHDIMLFTLSKLTGHAGSRF 203 (363)
T ss_dssp GEEEEEESS-T-TT---------------SSTTTEEEEEEE-TT---STT--TS---S-B--SEEEEEHHHHCS-GGG-E
T ss_pred CeEEEEeCCCC-Ccccccc---------hhcCCCCcceeeeeeee--ccc--ccccCCCCCCceEEEEEecccCcccccc
Confidence 44455566654 4444321 23355566789998884 111 0000011234665 8999999 89999
Q ss_pred EEEEecH-HHHHhhcCCCCcccccCCCCChHHHHHHHHHHHHhcC--------CCHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011959 323 GAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--------PGTYEYLNKITGELTQGIIDAGKKAGH 393 (474)
Q Consensus 323 G~~~~~~-~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--------~~~~~~~~~~~~~l~~~L~~~~~~~~~ 393 (474)
||.+.++ ++.+.+. .+...+|.+.+-=+|.-++..|+.+.+ .++.+.-.+..+.--++|+++......
T Consensus 204 GWAlVKD~~Va~kM~---~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~r 280 (363)
T PF04864_consen 204 GWALVKDEEVAKKMT---KYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKR 280 (363)
T ss_dssp EEEEES-HHHHHHHH---HHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSS
T ss_pred ceeeecCHHHHHHHH---HHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9997765 4555554 344567888887777777777776533 134443333333333444444322210
Q ss_pred -------------e-eEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC-----CcceEEecC
Q 011959 394 -------------A-ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLA 454 (474)
Q Consensus 394 -------------~-~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~~~~~ 454 (474)
. ........+.|+....+.. ..+...|++.||+-+.+. ...+|+++.
T Consensus 281 FSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed--------------~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml 346 (363)
T PF04864_consen 281 FSLQKFSPQYCNFFKRVREPSPAFAWLKCEREED--------------EDCYAVLREAKIITRSGVLFGADSRYVRLSML 346 (363)
T ss_dssp EEE---SCEEETTTTCEEE---SEEEEEESSCGG--------------SSHHHHHHCTTEEEEEGGGGTS-TTEEEEESS
T ss_pred eecCcCCchhccccccccCCCCCeEEEecCCccc--------------ccHHHHHHhCCcccCCCCccCCCCCeEEEecc
Confidence 0 0122345566666543211 346677788899887662 346899999
Q ss_pred CcHHHHHHHHHHHHHH
Q 011959 455 HSSDDIQHTITAAEKV 470 (474)
Q Consensus 455 ~t~e~i~~~l~~l~~~ 470 (474)
.++++.|.++++|...
T Consensus 347 ~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 347 KRDDDFDQLLERLSKL 362 (363)
T ss_dssp S-HHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999999753
No 386
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.83 E-value=0.0043 Score=57.71 Aligned_cols=330 Identities=16% Similarity=0.095 Sum_probs=175.9
Q ss_pred ccCCCCCHHHHHHHHHHHHhc---CCCC---C--C-CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHhH-hhc
Q 011959 111 AIIGHADDQVLAALGETMKKG---TSFG---A--P-CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR-AFT 179 (474)
Q Consensus 111 ~~lG~~~p~v~~a~~~~~~~~---~~~~---~--~-~~~~~~la~~l~~~~~-~~~~v~~~~sGseA~~~al~~ar-~~~ 179 (474)
|.||..+....+.+.+.+++- ..+| + | ...-+..-..++...+ ..+.|-+.||=+--+. .+.+.. .-|
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh-~Ll~sFyKPT 152 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLH-SLLISFYKPT 152 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHH-HHHHHhcCCc
Confidence 889998888888888888761 1121 1 1 0111222333444443 2456777776554433 333321 112
Q ss_pred -CCcEEEEEeCCCCCCchhHHHh---cCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011959 180 -GRERIIKFEGCYHGHADPFLVK---AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (474)
Q Consensus 180 -~~~~ii~~~~~yhg~~~~~~~~---~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (474)
+|-+|+.-..+|...+...-+. -|..+.. ....--|+. +.+++ ..+++-+.|+.+++.++.|.+..+
T Consensus 153 ekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~---sm~~iePRE-GEetl-----RteDILd~IEkngDeiA~v~fSGv 223 (465)
T KOG3846|consen 153 EKRFKILLEKKAFPSDHYAIESQCKLHGISPEN---SMIQIEPRE-GEETL-----RTEDILDTIEKNGDEIALVCFSGV 223 (465)
T ss_pred chhhhhhhccCCCCchHHHHHhhhhhcCCChHH---heEEecccc-cccch-----hHHHHHHHHHhcCCeEEEEEeecc
Confidence 3556666666665544333222 1221110 000000000 00111 356777788888889999999999
Q ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC-CccccccCCCCceeehhhhcCCCc-ceEEEEecHHHHH
Q 011959 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIME 333 (474)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~-~~~~~~~g~~pdi~t~sK~l~~G~-~iG~~~~~~~i~~ 333 (474)
+--+|.... +.+|-.--+..|+++=+|=+|. + |. ..-...||++--.-|-=|-+.+|- .||.....++...
T Consensus 224 qyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-v--gNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~ 296 (465)
T KOG3846|consen 224 QYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-V--GNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTK 296 (465)
T ss_pred eeecccccc----hhhhhhcccCCCcEechhhhhh-h--cCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhc
Confidence 988898887 6666655555688888888884 1 11 122223555333334457665432 4666644433221
Q ss_pred hhcC----------CCC-----------cccccCCCCChHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh-
Q 011959 334 MVAP----------AGP-----------MYQAGTLSGNPLAM-TAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK- 390 (474)
Q Consensus 334 ~~~~----------~~~-----------~~~~~t~~~~~~~~-aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~- 390 (474)
...+ .++ ...+.-.+.+|+-. ++....|+....-. .+.++++.-+|-.-|+.+...
T Consensus 297 ~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTgYleyL~k~~ 375 (465)
T KOG3846|consen 297 ESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTGYLEYLLKAS 375 (465)
T ss_pred chhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHHhHHHHHHHHh
Confidence 1110 001 11122234444443 34446677665422 556666655555555444321
Q ss_pred ----cCC-----------eeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEE---e
Q 011959 391 ----AGH-----------AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT---S 452 (474)
Q Consensus 391 ----~~~-----------~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~---~ 452 (474)
++. +..+..+|.-+.+.|..+ ...+.+.|.++|++.-....+.+|+ +
T Consensus 376 ~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp---------------~~~vfqeL~krGv~~DkR~PNvIRvAPvp 440 (465)
T KOG3846|consen 376 KGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP---------------TPKVFQELHKRGVIGDKRRPNVIRVAPVP 440 (465)
T ss_pred cccCchhhhcceeEEEeCCcccccccceEEEEeCCC---------------chHHHHHHHHcCeeccccCCCceEeecch
Confidence 111 112223344444444322 1467889999999987776667776 4
Q ss_pred cCCcHHHHHHHHHHHHHHHhh
Q 011959 453 LAHSSDDIQHTITAAEKVLRQ 473 (474)
Q Consensus 453 ~~~t~e~i~~~l~~l~~~~~~ 473 (474)
+..+-.|+-.+++.|.+++..
T Consensus 441 LYN~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 441 LYNTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred hhccHHHHHHHHHHHHHHHHH
Confidence 777999999999999998764
No 387
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.56 E-value=0.039 Score=60.29 Aligned_cols=299 Identities=14% Similarity=0.104 Sum_probs=149.0
Q ss_pred ccCCCCCHHHH-HHHHHHHHhcCCCC-CCC-------HHHHHHHHHHHhhCCCCC--eEEEeCCHHHHHHHHHHHhHhhc
Q 011959 111 AIIGHADDQVL-AALGETMKKGTSFG-APC-------LLENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFT 179 (474)
Q Consensus 111 ~~lG~~~p~v~-~a~~~~~~~~~~~~-~~~-------~~~~~la~~l~~~~~~~~--~v~~~~sGseA~~~al~~ar~~~ 179 (474)
-+.+|--|.|+ +.+.+.-+-.+.|. |.. +..-++-..+++++ +.+ ..-+...+|.+-| |+.+++.++
T Consensus 87 G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt-Gm~vaNASl~D~atA~aE-A~~ma~~~~ 164 (954)
T PRK12566 87 GYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT-GLDLANASLLDEATAAAE-AMALAKRVA 164 (954)
T ss_pred cccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh-CchhhhhhhccchhHHHH-HHHHHHHHh
Confidence 55666555554 65554322123232 221 22235666677777 333 3233445555555 333344444
Q ss_pred C--CcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccC
Q 011959 180 G--RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (474)
Q Consensus 180 ~--~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (474)
+ +++|+ .+.+-|..+...+..... ..|+ +++. +++++.+. +++++|++..+ +
T Consensus 165 ~~k~~~~~-v~~~~hP~~~~v~~t~~~---------~~g~------~i~~------~~~~~~~~---~~~~~v~vq~P-~ 218 (954)
T PRK12566 165 KSKSNRFF-VDEHCHPQTLSVLRTRAE---------GFGF------ELVV------DAVDNLAA---HAVFGALLQYP-D 218 (954)
T ss_pred hcCCCEEE-ECCCCCHHHHHHHHHhhh---------cCCc------EEEE------cchhhcCC---CCEEEEEEECC-C
Confidence 4 44544 455666655444432211 1111 1111 33444333 36888888543 3
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEE--eccccCc--ccCCCccccccCCCCceee-----hhhhcC-CCcceEEEEe
Q 011959 258 NSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGF--RLAYGGAQEYFGVTPDLTT-----LGKIIG-GGLPVGAYGG 327 (474)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~--DEv~~g~--r~g~~~~~~~~g~~pdi~t-----~sK~l~-~G~~iG~~~~ 327 (474)
.-|.+.. +++|.++++++|+++|+ |=.--++ .+|. +| .||++ ||=-++ ||--.|++.+
T Consensus 219 ~~G~i~d----~~~i~~~~h~~gal~~~~~d~laL~ll~~Pge------~G--ADI~vG~~Q~fGvp~~~GGP~ag~~a~ 286 (954)
T PRK12566 219 THGEIRD----LRPLIDQLHGQQALACVAADLLSLLVLTPPGE------LG--ADVVLGSTQRFGVPMGYGGPHAAYFAC 286 (954)
T ss_pred CceEEcc----HHHHHHHHHHcCCEEEEEeCHHHHhCCCChhh------cC--CcEEeeCCCcCCCCCCCCCCCeeeeee
Confidence 4577765 89999999999998773 2222222 2332 23 35542 344444 4555888888
Q ss_pred cHHHHHhhcC----------CCCcc---------------cccCCCCChHHHHHHHHHHHHh-cCCCH---HHHHHHHHH
Q 011959 328 RRDIMEMVAP----------AGPMY---------------QAGTLSGNPLAMTAGIHTLKRL-KEPGT---YEYLNKITG 378 (474)
Q Consensus 328 ~~~i~~~~~~----------~~~~~---------------~~~t~~~~~~~~aaa~aal~~~-~~~~~---~~~~~~~~~ 378 (474)
+++++..+-. .++.+ -.+..+.|..-++.+.+..-.+ -.+++ -+++..+..
T Consensus 287 ~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~ 366 (954)
T PRK12566 287 RDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTA 366 (954)
T ss_pred hHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 8887765531 00000 0111122322222222222111 22333 344556677
Q ss_pred HHHHHHHHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEe--cCCc
Q 011959 379 ELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHS 456 (474)
Q Consensus 379 ~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t 456 (474)
+|.+.|.+.+.+ .. ....|--+.+.- .. ...++.+..+++|+-++-.....+.++ =.+|
T Consensus 367 ~l~~~l~~~g~~--~~----~~~fF~~~~v~~-----------~~--~~~~~~~~a~~~~~n~r~~~~~~~~~s~de~~~ 427 (954)
T PRK12566 367 ILAAGLEAKGIK--RL----NRHFFDTLTLEV-----------GG--AQAAIIESAEAARINLRILGRGRLGVSLDETCD 427 (954)
T ss_pred HHHHHHHhcCCc--cc----cCCccceEEEEc-----------cC--CHHHHHHHHHHCCCeeEEeCCCeEEEEeCCCCC
Confidence 788888764211 11 111111111110 00 135678888899998877655555555 4779
Q ss_pred HHHHHHHHHHHH
Q 011959 457 SDDIQHTITAAE 468 (474)
Q Consensus 457 ~e~i~~~l~~l~ 468 (474)
++|++.++++|.
T Consensus 428 ~~~~~~~~~~f~ 439 (954)
T PRK12566 428 EATVARLFDIFL 439 (954)
T ss_pred HHHHHHHHHHhc
Confidence 999999999883
No 388
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.45 E-value=0.032 Score=53.41 Aligned_cols=277 Identities=17% Similarity=0.116 Sum_probs=133.7
Q ss_pred eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHH
Q 011959 161 VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLF 240 (474)
Q Consensus 161 ~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l 240 (474)
.-||+-||..+... .....++|...+-.--|+........+..+... .-.+..+|......+-.+ |-|.||+..
T Consensus 112 p~SGSPANfavYta--ll~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~-SiyFeSmPYkv~~~TG~I---DYD~Le~~A 185 (477)
T KOG2467|consen 112 PYSGSPANFAVYTA--LLKPHERIMGLDLPSGGHLSHGYQTPTKKISAT-SIYFESMPYKVDPSTGYI---DYDKLEKTA 185 (477)
T ss_pred cCCCCchhhHHHhh--hcCCCCeeeeccCCCCCccccccccCCceeeee-eeecccCceeeCCCCCce---ehHHHHHHH
Confidence 34799999888773 345667888776443232211111111111000 001111111001011111 677887765
Q ss_pred hcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-ccCC-CccccccCCCCcee--ehhhh
Q 011959 241 ENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAY-GGAQEYFGVTPDLT--TLGKI 315 (474)
Q Consensus 241 ~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~-~~~~~~~g~~pdi~--t~sK~ 315 (474)
... +++.+|+-.. .--..+. ..+++++|++.|++|++|=+| +|+ -.+. ...++|. ||+ |.-|+
T Consensus 186 ~~f--rPk~iiaG~S--aY~R~~D----YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~----DiVTTTTHKs 253 (477)
T KOG2467|consen 186 TLF--RPKLIIAGTS--AYSRLID----YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC----DIVTTTTHKS 253 (477)
T ss_pred Hhc--CCcEEEeccc--cchhhcc----HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc----ceeecccccc
Confidence 544 4566665321 1111233 889999999999999999999 777 4332 3334443 555 46799
Q ss_pred cCCCcceEEEEecHHHH---------------HhhcC-CCCcccccCCCCChHHHHHHHHHHHHhcCC---CHHHHHHHH
Q 011959 316 IGGGLPVGAYGGRRDIM---------------EMVAP-AGPMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKI 376 (474)
Q Consensus 316 l~~G~~iG~~~~~~~i~---------------~~~~~-~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~ 376 (474)
|-| -|.|-+.-++-+. +.+.. .-+..+++.++- .+++...+|+....+ .+.+++.++
T Consensus 254 LRG-PRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNh---tIaalAvALkQa~tpefk~Yq~qV~~N 329 (477)
T KOG2467|consen 254 LRG-PRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNH---TIAALAVALKQAMTPEFKEYQKQVLKN 329 (477)
T ss_pred ccC-CcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcc---hHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 874 3444444443221 11110 012334444332 233333455554443 455666777
Q ss_pred HHHHHHHHHHHhhhcCCeeEEee-eceeEEEEEecCCCcCcccccccchHHHHHHHHHH---HHCCeEeccc---CCcce
Q 011959 377 TGELTQGIIDAGKKAGHAICGGY-ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM---LEEGVYFAPS---QFEAG 449 (474)
Q Consensus 377 ~~~l~~~L~~~~~~~~~~~~v~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~Gv~v~~~---~~~~~ 449 (474)
.+.|.+.|.+.+.+. ...| .-.++.+++.... -+....+.+++.+ +.+.-+.... ....+
T Consensus 330 akala~~l~~~Gy~l----vtgGTDnHlvLvDLr~~G---------~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGi 396 (477)
T KOG2467|consen 330 AKALASALISRGYKL----VTGGTDNHLVLVDLRPKG---------VDGARVEKVLELCHIALNKNTVPGDKSALSPGGI 396 (477)
T ss_pred HHHHHHHHHHcCceE----ecCCccceEEEEeccccC---------CchHHHHHHHHHhhhhhcCCcCCCCccccCCCce
Confidence 777877777653221 1111 1224444543211 1233333333332 3332221111 12235
Q ss_pred EE------ecCCcHHHHHHHHHHHHHHHh
Q 011959 450 FT------SLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 450 ~~------~~~~t~e~i~~~l~~l~~~~~ 472 (474)
|+ +-...++|.++..+-|.++++
T Consensus 397 RiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 397 RIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred eccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 55 234568898888888887753
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.34 E-value=0.037 Score=51.53 Aligned_cols=197 Identities=21% Similarity=0.269 Sum_probs=112.7
Q ss_pred CCHHHHHHHHHHHHh------cCCCCCCCHHHHHHHHHHHhhCCCCC----eEEEeCCHHHHHHHHHHHhHhhcCCcEEE
Q 011959 116 ADDQVLAALGETMKK------GTSFGAPCLLENVLAEMVISAVPSIE----MVRFVNSGTEACMGVLRLARAFTGRERII 185 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~------~~~~~~~~~~~~~la~~l~~~~~~~~----~v~~~~sGseA~~~al~~ar~~~~~~~ii 185 (474)
+..+|++|.++.--. .+.||+-+..+..|.+-.++.++ .| +..| -||+.|+..||-- .+.++++.+
T Consensus 36 Nq~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~-aE~a~VRpq~-isGTHAI~~aLfg--~LRpgDell 111 (416)
T COG4100 36 NQKKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFG-AEAALVRPQI-ISGTHAIACALFG--ILRPGDELL 111 (416)
T ss_pred HHHHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhc-cccceeeeee-ecchhHHHHHHHh--ccCCCCeEE
Confidence 345677777653211 13456666667888888888884 33 3334 3699999999984 345667777
Q ss_pred EEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccC-----CCHHHHHHHHhcCCCCeEEEEEccccCCCC
Q 011959 186 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-----NDVSALENLFENNKGEIAAIILEPVVGNSG 260 (474)
Q Consensus 186 ~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (474)
...+.=.-...-.+...|.+.-.+ . ..++ ....+|. -|.+.++..+. +++++|.+--.. |
T Consensus 112 ~i~G~PYDTLeevIG~rg~~~gSL--~-dfgi------~Y~~v~Lt~~gkiD~~~v~~~i~---~~tkli~IQRS~---G 176 (416)
T COG4100 112 YITGSPYDTLEEVIGLRGEGQGSL--K-DFGI------KYKAVPLTADGKIDIQAVKTAIS---DRTKLIGIQRSK---G 176 (416)
T ss_pred EecCCcchhHHHHhccCCCCcccH--H-HhCc------ceeecccccCCcccHHHHHHhcC---ccceEEEEEecc---C
Confidence 776542221222222222211000 0 0000 0111111 17888888887 467777764332 2
Q ss_pred ccc-CC--HHHHHHHHHHHHHh--CCEEEEeccccCc-ccCCCccccccCCCCcee--ehhhhcCCCc--ceEEEEecHH
Q 011959 261 FIA-PK--PDFLNAIRRITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGL--PVGAYGGRRD 330 (474)
Q Consensus 261 ~i~-~~--~~~l~~l~~l~~~~--g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi~--t~sK~l~~G~--~iG~~~~~~~ 330 (474)
.-+ |+ -.-++++.++.++- ++++.+|..|..| -.- +-..+-.|++ ++=|--|||+ --||+.++++
T Consensus 177 Y~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~-----EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~ 251 (416)
T COG4100 177 YAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK-----EPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAE 251 (416)
T ss_pred cCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc-----CccccchhhhccceeeCCCCceeeccceeechHH
Confidence 222 11 12266666666664 6889999999887 321 2233455776 6779888886 3567789999
Q ss_pred HHHhhc
Q 011959 331 IMEMVA 336 (474)
Q Consensus 331 i~~~~~ 336 (474)
+++...
T Consensus 252 ~ve~~~ 257 (416)
T COG4100 252 LVEAAA 257 (416)
T ss_pred HHHhhc
Confidence 988654
No 390
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.32 E-value=0.1 Score=51.67 Aligned_cols=137 Identities=18% Similarity=0.206 Sum_probs=75.5
Q ss_pred CHHHHHHHHHHHhhCC----------CCCeEEEeCCHHHHHHHHHHHhHhhc-----CC-----------cEEEEEeCCC
Q 011959 138 CLLENVLAEMVISAVP----------SIEMVRFVNSGTEACMGVLRLARAFT-----GR-----------ERIIKFEGCY 191 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~----------~~~~v~~~~sGseA~~~al~~ar~~~-----~~-----------~~ii~~~~~y 191 (474)
++++.-..+||.+.+. +..--++-.|.+|++..++..||.-. .+ +-|.++..--
T Consensus 112 TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqa 191 (511)
T KOG0628|consen 112 TELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQA 191 (511)
T ss_pred HHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcc
Confidence 4555555566655441 22223444668999999998776431 11 2244444444
Q ss_pred CCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcC--CCCeEEEEEccccCCCCcccCCHHHH
Q 011959 192 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFL 269 (474)
Q Consensus 192 hg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~a~vi~ep~~~~~G~i~~~~~~l 269 (474)
|....-+....+.....++.....++ +.+.|+++|++. .+-+..+++ ...|++|...-.. +
T Consensus 192 hssveka~~i~~VklR~l~td~n~~m--------------r~~~L~~AIe~D~arGlIPf~v~-at~GTT~~ca~D~--l 254 (511)
T KOG0628|consen 192 HSSVEKACLIAGVKLRALPTDENFGM--------------RGDTLRKAIEEDIARGLIPFFVC-ATLGTTSSCAFDE--L 254 (511)
T ss_pred cchHHHhHhhcceeEEEeecccCcCC--------------CHHHHHHHHHHHHhCCCccEEEE-EeecCcccccccc--H
Confidence 44433333333322111100000011 578888888752 123444444 4446665544332 9
Q ss_pred HHHHHHHHHhCCEEEEeccccC
Q 011959 270 NAIRRITKENGALLIFDEVMTG 291 (474)
Q Consensus 270 ~~l~~l~~~~g~llI~DEv~~g 291 (474)
.+|..+|+++|++|.+|.+|.|
T Consensus 255 ~elg~Vc~~~glWLHVDAAYAG 276 (511)
T KOG0628|consen 255 EELGPVCREEGLWLHVDAAYAG 276 (511)
T ss_pred HHhcchhhhcCEEEEeehhhcc
Confidence 9999999999999999999975
No 391
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.21 E-value=0.18 Score=48.56 Aligned_cols=197 Identities=18% Similarity=0.081 Sum_probs=109.3
Q ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCC-CCceeeh--hhhcC-CCcce
Q 011959 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGV-TPDLTTL--GKIIG-GGLPV 322 (474)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~-~pdi~t~--sK~l~-~G~~i 322 (474)
.+-|...++....|+-.++.. .+... .++|+|-.-.=| +. ..++ +-|++.+ .|-+| .| +
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p------~~~~~--~~~v~D~SS~il------sr-~iDvsk~dviyagaQKnlGpaG--l 207 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELP------DIGSD--GLLVADASSAIL------SR-PIDVSKYDVIYAGAQKNLGPAG--L 207 (365)
T ss_pred ccEEEEecCCcccceEccCCC------CCCCC--ceEEEecccHHh------cC-CCChhHcceEEEehhhccCccc--e
Confidence 455777777666777666322 12222 788888443211 11 1122 2356654 59999 47 8
Q ss_pred EEEEecHHHHHhhcCC-CC--------cccccCCCCChHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011959 323 GAYGGRRDIMEMVAPA-GP--------MYQAGTLSGNPLAM-TAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (474)
Q Consensus 323 G~~~~~~~i~~~~~~~-~~--------~~~~~t~~~~~~~~-aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (474)
+.++.++++++.+... -+ ....++|+.+|..+ ....-+++.+...+=++.+.++.+.-.+.|-+..++.+
T Consensus 208 tvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~ 287 (365)
T COG1932 208 TVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSD 287 (365)
T ss_pred EEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8899999999888642 11 23456776665443 33445677777644334444444333334433333333
Q ss_pred Cee---EEeeeceeE-EEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccC--CcceEEe--cCCcHHHHHHHH
Q 011959 393 HAI---CGGYISGMF-GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTI 464 (474)
Q Consensus 393 ~~~---~v~~~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~~~--~~~t~e~i~~~l 464 (474)
... .-..+..|- .|.+ .+.+....|...+.++|+..-.+. .+.+|.+ -++..|+++.++
T Consensus 288 fy~~~v~~~~RS~mnV~f~~-------------~~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~ 354 (365)
T COG1932 288 FYRNLVAKANRSRMNVTFTL-------------VDAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALT 354 (365)
T ss_pred ccccccchhhccceeEEEEc-------------CcHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHH
Confidence 111 112222221 1222 234455778888888887665442 1235554 577899999999
Q ss_pred HHHHHHHhh
Q 011959 465 TAAEKVLRQ 473 (474)
Q Consensus 465 ~~l~~~~~~ 473 (474)
+-++++.++
T Consensus 355 ~fm~~f~~~ 363 (365)
T COG1932 355 DFMDWFEET 363 (365)
T ss_pred HHHHHHHHh
Confidence 999888654
No 392
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.71 E-value=0.0097 Score=51.04 Aligned_cols=73 Identities=8% Similarity=0.087 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-----CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCC
Q 011959 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (474)
Q Consensus 118 p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-----~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (474)
+.+++++.+. .....+.+..++++++++++.++++ .+++|++++|+++|++.+++. ....++.|++.++.|.
T Consensus 76 ~~i~~~~~~~-a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~--l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 76 EGTIDSFKDI-ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFC--IADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHH-hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHH--HcCCCCEEEEeCCCCC
Confidence 4556666552 2233344577899999999988753 467999999999999999984 2345678888888886
Q ss_pred C
Q 011959 193 G 193 (474)
Q Consensus 193 g 193 (474)
|
T Consensus 153 ~ 153 (153)
T PLN02994 153 A 153 (153)
T ss_pred C
Confidence 5
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=92.31 E-value=0.5 Score=43.41 Aligned_cols=55 Identities=25% Similarity=0.306 Sum_probs=37.8
Q ss_pred CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
|++.+++.+++.+++..+.|.... .-..+-.++-+++|..+|..|++.-|+..+|
T Consensus 142 dleav~~~iee~g~dcilci~stt---scfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTT---SCFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeecc---cccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 789999999876555322222211 1112334445999999999999999999998
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=88.43 E-value=36 Score=35.87 Aligned_cols=100 Identities=12% Similarity=0.299 Sum_probs=55.3
Q ss_pred eEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHH
Q 011959 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 236 (474)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l 236 (474)
..-+..-|+.|-|+..... ...++++ ++.+...|..+...+.....+ .++ + +...|++..
T Consensus 182 NASLLDEgTAaaEAm~l~~-~~~krkk-~vvd~~~hpqtlsV~~TRa~~---------~~i------~---v~~~~~~~~ 241 (1001)
T KOG2040|consen 182 NASLLDEGTAAAEAMALCN-RINKRKK-FVVDSNCHPQTLSVVKTRAKG---------FGI------K---VVVSDIKEA 241 (1001)
T ss_pred chhhhccchhHHHHHHHHH-hhcccce-EEecCCCCcchhhhhhccccc---------cce------e---EEecCHHHh
Confidence 3334445666666554433 3445556 555677777665554332210 011 1 111133332
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 237 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 237 e~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
... .+++..+++--+ ...|.+.+ +.++.++++++|.++++
T Consensus 242 ~~s----~~~v~gvlvQYP-~t~G~i~d----~~el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 242 DYS----SKDVSGVLVQYP-DTEGSVLD----FDELVELAHANGSLVVM 281 (1001)
T ss_pred hcc----ccceeEEEEEcC-CCCCcccC----HHHHHHHhhccCceEEE
Confidence 221 236777777543 44678888 88899999999988774
No 395
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=73.32 E-value=13 Score=34.68 Aligned_cols=89 Identities=19% Similarity=0.281 Sum_probs=58.6
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCc--ccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccCCCccccccCCCCce
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGF--IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 309 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~--i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pdi 309 (474)
++.|.+++..++...-.+|++|.+|+|.. -.|...|...|.+|-+.-|+.+| |. +++. +......+..||
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl------GYV~T~Y-g~R~~~~V~~dI 90 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL------GYVHTSY-GSRPLSEVKADI 90 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE------EEEEccc-cCCCHHHHHHHH
Confidence 77888888888877789999999998743 45899999999999877777666 44 4432 122222344455
Q ss_pred eehhhhcC----CCcceEEEEec
Q 011959 310 TTLGKIIG----GGLPVGAYGGR 328 (474)
Q Consensus 310 ~t~sK~l~----~G~~iG~~~~~ 328 (474)
-+.....+ .++++.++...
T Consensus 91 ~~Y~~W~~~~~~~~~~vdGIFfD 113 (253)
T PF12138_consen 91 DTYASWYGQSEDYGYRVDGIFFD 113 (253)
T ss_pred HHHhhccccccCCCcccceEEEe
Confidence 55444332 14566666543
No 396
>PRK05782 bifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase; Validated
Probab=66.63 E-value=99 Score=30.25 Aligned_cols=44 Identities=20% Similarity=0.312 Sum_probs=25.7
Q ss_pred CcceEEEEecHHHHHhhcCCC--CcccccCCCCChHHHHHHHHHHHH
Q 011959 319 GLPVGAYGGRRDIMEMVAPAG--PMYQAGTLSGNPLAMTAGIHTLKR 363 (474)
Q Consensus 319 G~~iG~~~~~~~i~~~~~~~~--~~~~~~t~~~~~~~~aaa~aal~~ 363 (474)
|+|+||+-..+ -.+.+.... ....-++-+|++++.++..+.++.
T Consensus 287 g~PVGFV~a~e-sKe~L~~~~vP~I~~~G~kGGs~vAaa~vNal~~~ 332 (335)
T PRK05782 287 ATPPGFTNAKE-VKEALIESGIPSVVLRGTYGGSGIAVAIINELIKM 332 (335)
T ss_pred EeCCcccCHHH-HHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHHH
Confidence 67899985432 222222211 123456788899888887776653
No 397
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=63.97 E-value=67 Score=29.06 Aligned_cols=61 Identities=11% Similarity=0.150 Sum_probs=34.5
Q ss_pred eEEccCCCHHHHHHHHhcC-----CCCeEEEEEccccCCCCc-ccC----------CHHHHHHHHHHHHHhCCEEEE
Q 011959 225 TLTAPFNDVSALENLFENN-----KGEIAAIILEPVVGNSGF-IAP----------KPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 225 ~~~~~~~d~~~le~~l~~~-----~~~~a~vi~ep~~~~~G~-i~~----------~~~~l~~l~~l~~~~g~llI~ 285 (474)
++.+...+.+++...+.+. ...+..|+++++..--.. ... -.+++..|..+|+++++.+|+
T Consensus 88 i~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 88 IYVARPYNGEQQLEIVEELERIMSSGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhhcCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 3444444555554444321 236889999997642110 011 123456789999999987663
No 398
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=57.35 E-value=22 Score=31.31 Aligned_cols=53 Identities=17% Similarity=0.352 Sum_probs=31.5
Q ss_pred CHHHHHHHHhcCCCCeEEEEEccccCCCCc-ccCC---HHHHHHHHHHHHHhCCEEEE
Q 011959 232 DVSALENLFENNKGEIAAIILEPVVGNSGF-IAPK---PDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~-i~~~---~~~l~~l~~l~~~~g~llI~ 285 (474)
+++.+++.+.+.. ++..||+++...-.+. .... ..+++.|.++|+++|+.+|+
T Consensus 128 ~~~~l~~~~~~~~-~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 128 DLEELEAALKELY-GPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHHTT-----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHHhhcC-CCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3667777777622 4789999998765322 2211 35889999999999987663
No 399
>PLN02672 methionine S-methyltransferase
Probab=55.33 E-value=1.5e+02 Score=34.11 Aligned_cols=130 Identities=16% Similarity=0.124 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCC--CCCCchhH--HHhcCCCCccCCC
Q 011959 139 LLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC--YHGHADPF--LVKAGSGVATLGL 211 (474)
Q Consensus 139 ~~~~~la~~l~~~~~---~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~--yhg~~~~~--~~~~g~~~~~~~~ 211 (474)
..+.-++..+..++. ..+.|++.+|-..|++.++++ +..+=-+ .|.. -|-...+. +...+.+..
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---- 500 (1082)
T PLN02672 430 RFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRL---FSPRLAI--VDEHLTRWLPKKWLTSLAIENATSD---- 500 (1082)
T ss_pred HHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHh---hChHHHh--hhhhhhccCCHHHHhHhhhhccccc----
Confidence 455566666666554 578999999999999999994 4433111 1111 11111111 111111100
Q ss_pred CCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 212 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 212 ~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
.. .....+++..|.. -+.+.+++++- ++..|++---+.+ ...... ++.|.+.+++-|+.|+.|+.-
T Consensus 501 ~~-----~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 501 SK-----SDDVITVIEAPRQ-SDLVIELIKKL--KPQVVVTGMADFE---MRTSTA-FEHLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred Cc-----cCCeEEEEeCCCc-chHHHHHHHhC--CCeEEEEeccchh---hhhHHH-HHHHHHHHHhhCcEEEEehhh
Confidence 00 0111234555554 33556677754 3444444322222 222333 888999999999999999864
No 400
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=52.15 E-value=37 Score=32.68 Aligned_cols=37 Identities=24% Similarity=0.377 Sum_probs=27.2
Q ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
.|++....+.+ -+.+|+.+|.++|++.|+.+++|-.-
T Consensus 132 ~VvlsGSlP~g----~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 132 IVVLSGSLPPG----VPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred EEEEeCCCCCC----CCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 45555433332 35677999999999999999999544
No 401
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=51.63 E-value=48 Score=32.63 Aligned_cols=59 Identities=29% Similarity=0.317 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHHHhcCCCC------CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhh
Q 011959 116 ADDQVLAALGETMKKGTSFG------APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 178 (474)
Q Consensus 116 ~~p~v~~a~~~~~~~~~~~~------~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~ 178 (474)
.|-+|.+|+.+.-++...|- +..+...-|-+.| .-..++++++||+|-.+.+-.+|+.+
T Consensus 434 tHrEiQqaLvdi~DKpA~FVGSrQWIGStEis~vLn~ll----~~~skil~v~sGaEva~~~rELA~HF 498 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAKFVGSRQWIGSTEISFVLNELL----KLESKILAVNSGAEVAERVRELARHF 498 (577)
T ss_pred cHHHHHHHHHhccCcccceecccceecchhHHHHHHHHh----ccceEEEEeccccHHHHHHHHHHHHh
Confidence 46788888888776643221 2344444444444 22358999999999999999999877
No 402
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=50.23 E-value=83 Score=26.20 Aligned_cols=57 Identities=23% Similarity=0.349 Sum_probs=37.1
Q ss_pred CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHH-HHHHh-CCEEE-Eecccc
Q 011959 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR-ITKEN-GALLI-FDEVMT 290 (474)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~-l~~~~-g~llI-~DEv~~ 290 (474)
+++.|.++++++ ++..|++=-+.++.|...+.....++..+ |.+++ ++.++ +||-+|
T Consensus 39 ~~~~l~~li~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEY--QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHC--CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHh--CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 799999999986 56666664444555666665554555444 44455 88654 899886
No 403
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=46.91 E-value=1.6e+02 Score=25.09 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=22.6
Q ss_pred CeEEEEEccc-cCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 011959 246 EIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLI 284 (474)
Q Consensus 246 ~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI 284 (474)
....|++.+. ..+.+. .....|-+.++++|+++++.++
T Consensus 101 ~~~vil~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 101 GAPVLLVGMQAPPNYGP-RYTRRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred CCeEEEEecCCCCccch-HHHHHHHHHHHHHHHHcCCcEe
Confidence 3455666543 222221 1235667788899999998666
No 404
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=45.48 E-value=1.8e+02 Score=24.31 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=29.8
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 286 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~D 286 (474)
.+.|+++++.-+.+...+++.|... .....++-+.+.++|++|.-+.++|
T Consensus 66 ~~nl~~ii~~~~~~~~ivlv~~~~~----~~~~~~~n~~~~~~a~~~~~v~~id 115 (150)
T cd01840 66 KDQLDELLDALGPDRQVYLVNPHVP----RPWEPDVNAYLLDAAKKYKNVTIID 115 (150)
T ss_pred HHHHHHHHHHcCCCCEEEEEECCCC----cchHHHHHHHHHHHHHHCCCcEEec
Confidence 4566666665443456677766521 1124566777889999993334444
No 405
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=43.14 E-value=46 Score=33.13 Aligned_cols=58 Identities=10% Similarity=0.157 Sum_probs=38.2
Q ss_pred EEccCCCHHHHHHHHhcCCCCeEEEEEccccCCC--------CcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 226 LTAPFNDVSALENLFENNKGEIAAIILEPVVGNS--------GFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 226 ~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~--------G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
+.+...+++.+.+.+++. ++..||+++++... |...--.+++..|.++++++|+.+|+
T Consensus 140 ~l~~e~~le~I~~~i~~~--~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 140 YLLAETNLEDILASIEEL--KPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEEccCcHHHHHHHHHhc--CCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 334445788888887654 57889999986531 11111234567789999999987653
No 406
>smart00642 Aamy Alpha-amylase domain.
Probab=42.63 E-value=71 Score=27.66 Aligned_cols=57 Identities=18% Similarity=0.331 Sum_probs=37.7
Q ss_pred CHHHHHHH---HhcCCCCeEEEEEccccCCCC-------c-------c---cCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011959 232 DVSALENL---FENNKGEIAAIILEPVVGNSG-------F-------I---APKPDFLNAIRRITKENGALLIFDEVMT 290 (474)
Q Consensus 232 d~~~le~~---l~~~~~~~a~vi~ep~~~~~G-------~-------i---~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (474)
|++.+.+. |++- .+.+|.+.|++.... . + .-..+-++++++-|+++|+-+|+|=|..
T Consensus 17 ~~~gi~~~l~yl~~l--G~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 17 DLQGIIEKLDYLKDL--GVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CHHHHHHHHHHHHHC--CCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 56655544 3332 477888888764331 0 0 1122349999999999999999998875
No 407
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=42.40 E-value=2.9e+02 Score=25.78 Aligned_cols=144 Identities=12% Similarity=0.039 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCC
Q 011959 118 DQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCY 191 (474)
Q Consensus 118 p~v~~a~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (474)
.++.+.+.+..+.|.. .+...+...+.-+.+.+.+++.-.+.+ .|.|.. .+.|+++++.+.. ..+-.++..+
T Consensus 87 ~~~~~~~~~~~~~G~~~~KiKvg~~~~~d~~~v~~vr~~~g~~~~l~vDan~~~~-~~~a~~~~~~l~~-~~i~~iEeP~ 164 (265)
T cd03315 87 AEVAEEARRALEAGFRTFKLKVGRDPARDVAVVAALREAVGDDAELRVDANRGWT-PKQAIRALRALED-LGLDYVEQPL 164 (265)
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEEeCCCCcC-HHHHHHHHHHHHh-cCCCEEECCC
Confidence 4556666665555421 122223345666677776653234555 455444 6778887766654 3455566665
Q ss_pred CCCchhHH-HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHH
Q 011959 192 HGHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (474)
Q Consensus 192 hg~~~~~~-~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (474)
+......+ .+... ...|...+ -...+.++++++++.. ....|.+.+.. .|.+.. ..
T Consensus 165 ~~~d~~~~~~l~~~----~~ipia~d-----------E~~~~~~~~~~~i~~~--~~d~v~~k~~~--~GGi~~----~~ 221 (265)
T cd03315 165 PADDLEGRAALARA----TDTPIMAD-----------ESAFTPHDAFRELALG--AADAVNIKTAK--TGGLTK----AQ 221 (265)
T ss_pred CcccHHHHHHHHhh----CCCCEEEC-----------CCCCCHHHHHHHHHhC--CCCEEEEeccc--ccCHHH----HH
Confidence 54322222 11111 00110000 0123678888888753 35566666643 344555 78
Q ss_pred HHHHHHHHhCCEEEEe
Q 011959 271 AIRRITKENGALLIFD 286 (474)
Q Consensus 271 ~l~~l~~~~g~llI~D 286 (474)
++.++|+++|+.++.=
T Consensus 222 ~~~~~A~~~gi~~~~~ 237 (265)
T cd03315 222 RVLAVAEALGLPVMVG 237 (265)
T ss_pred HHHHHHHHcCCcEEec
Confidence 8999999999987764
No 408
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=42.08 E-value=3.2e+02 Score=26.20 Aligned_cols=106 Identities=23% Similarity=0.300 Sum_probs=60.5
Q ss_pred CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCC--CCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCC
Q 011959 154 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC--YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231 (474)
Q Consensus 154 ~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~--yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 231 (474)
....|++|.|.|..++.-|+.|+.-..+-.||+.++. +-|+.... .+... |+ ++..++
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak-~la~~-----------gi------ettVI~-- 220 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAK-PLAQA-----------GI------ETTVIP-- 220 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhH-HHHHc-----------CC------eeEEec--
Confidence 4568999999999999999987554444456666542 33321111 11111 11 122222
Q ss_pred CHHHHHHHHhcCCCCeEEEE--EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 011959 232 DVSALENLFENNKGEIAAII--LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 286 (474)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi--~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~D 286 (474)
| .++-.++. ++-.|| .-.+..|||...+.- ...++..+++|-+++|+=
T Consensus 221 d-aaVfA~Ms----rVnKVIigt~avl~NGgl~~~~G--~~~vAlaAk~h~vPv~Vl 270 (353)
T KOG1465|consen 221 D-AAVFAMMS----RVNKVIIGTHAVLANGGLRAPSG--VHTVALAAKHHSVPVIVL 270 (353)
T ss_pred c-HHHHHHhh----hcceEEEEeeeEecCCCeeccch--HHHHHHHHHhcCCcEEEe
Confidence 3 23334444 222233 244778888776655 667888889999988863
No 409
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=41.30 E-value=61 Score=29.40 Aligned_cols=95 Identities=16% Similarity=0.249 Sum_probs=53.4
Q ss_pred HHHHHHHHhcCCCCeEEEEE-ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCcccCCCccccccCCCC-ce
Q 011959 233 VSALENLFENNKGEIAAIIL-EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFGVTP-DL 309 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~-ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~r~g~~~~~~~~g~~p-di 309 (474)
++.+|++++. .+.++.+ +-....- -. .+..++++++|++|++.||+++=. .-...+-.+ -|.|-.. .+
T Consensus 24 ~~~ve~al~~---Gv~~vQlR~K~~~~~--~~--~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdG--VHlGq~D~~~ 94 (211)
T COG0352 24 LEWVEAALKG---GVTAVQLREKDLSDE--EY--LALAEKLRALCQKYGVPLIINDRVDLALAVGADG--VHLGQDDMPL 94 (211)
T ss_pred HHHHHHHHhC---CCeEEEEecCCCChH--HH--HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCE--EEcCCcccch
Confidence 7888888873 3444443 4432211 11 344688999999999987766533 211111111 1333331 22
Q ss_pred eehhhhcCCCcceEEEEecHHHHHhhc
Q 011959 310 TTLGKIIGGGLPVGAYGGRRDIMEMVA 336 (474)
Q Consensus 310 ~t~sK~l~~G~~iG~~~~~~~i~~~~~ 336 (474)
-...|-++.++.+|+-+.+.+-.....
T Consensus 95 ~~ar~~~~~~~iIG~S~h~~eea~~A~ 121 (211)
T COG0352 95 AEARELLGPGLIIGLSTHDLEEALEAE 121 (211)
T ss_pred HHHHHhcCCCCEEEeecCCHHHHHHHH
Confidence 345677778888999877665444443
No 410
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=40.87 E-value=61 Score=32.48 Aligned_cols=59 Identities=7% Similarity=0.177 Sum_probs=41.6
Q ss_pred ceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCC--------CCcccCCHHHHHHHHHHHHHhCCEEE
Q 011959 224 ETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN--------SGFIAPKPDFLNAIRRITKENGALLI 284 (474)
Q Consensus 224 ~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~--------~G~i~~~~~~l~~l~~l~~~~g~llI 284 (474)
+.+.++..+++++.+.+++. ++..+|++++|.. .|.+.--.+--.+|.++++++|+.++
T Consensus 148 ~l~l~aEt~~e~I~~~l~~~--~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~f 214 (456)
T COG1066 148 NLYLLAETNLEDIIAELEQE--KPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIF 214 (456)
T ss_pred ceEEehhcCHHHHHHHHHhc--CCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEE
Confidence 35555666899999888864 6788999988753 24443334556778889999998654
No 411
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=40.23 E-value=87 Score=27.76 Aligned_cols=83 Identities=18% Similarity=0.184 Sum_probs=42.2
Q ss_pred EcCCCEEEeccCChhhccCCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHH
Q 011959 95 DIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRL 174 (474)
Q Consensus 95 d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ 174 (474)
+.+|..+||+.+|.|+. | .||+.+.+...+..-........+.+-+...--..+..++-+... .+++
T Consensus 41 ~i~g~~~LDlFAGSGaL--G------lEAlSRGA~~~~~vE~~~~a~~~l~~N~~~l~~~~~~~~~~~da~----~~L~- 107 (187)
T COG0742 41 EIEGARVLDLFAGSGAL--G------LEALSRGAARVVFVEKDRKAVKILKENLKALGLEGEARVLRNDAL----RALK- 107 (187)
T ss_pred ccCCCEEEEecCCccHh--H------HHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCccceEEEeecHH----HHHH-
Confidence 47899999999996543 2 344433322211111123334445555433321233333433322 3333
Q ss_pred hHhhcCC--cEEEEEeCCCC
Q 011959 175 ARAFTGR--ERIIKFEGCYH 192 (474)
Q Consensus 175 ar~~~~~--~~ii~~~~~yh 192 (474)
....+ -++|..||.|+
T Consensus 108 --~~~~~~~FDlVflDPPy~ 125 (187)
T COG0742 108 --QLGTREPFDLVFLDPPYA 125 (187)
T ss_pred --hcCCCCcccEEEeCCCCc
Confidence 33444 68999999997
No 412
>PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins. TniB is a probable ATP-binding protein [] which is involved in Tn5053 mercury resistance transposition [].
Probab=39.83 E-value=17 Score=34.75 Aligned_cols=120 Identities=13% Similarity=0.151 Sum_probs=69.5
Q ss_pred HHHhcCCCCeEEEEEccccCC-CCcccCCHHHHHHHHHHHHHhCCEEE---EeccccCcccCC-------CccccccCCC
Q 011959 238 NLFENNKGEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLI---FDEVMTGFRLAY-------GGAQEYFGVT 306 (474)
Q Consensus 238 ~~l~~~~~~~a~vi~ep~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI---~DEv~~g~r~g~-------~~~~~~~g~~ 306 (474)
.+++.. .++.+|++-+++- .|......+|+..|+.|+.+..+.+| .+|++..+++.. .+....|...
T Consensus 139 ~llr~~--~vrmLIIDE~H~lLaGs~~~qr~~Ln~LK~L~NeL~ipiV~vGt~~A~~al~~D~QLa~RF~~~~Lp~W~~d 216 (302)
T PF05621_consen 139 RLLRRL--GVRMLIIDEFHNLLAGSYRKQREFLNALKFLGNELQIPIVGVGTREAYRALRTDPQLASRFEPFELPRWELD 216 (302)
T ss_pred HHHHHc--CCcEEEeechHHHhcccHHHHHHHHHHHHHHhhccCCCeEEeccHHHHHHhccCHHHHhccCCccCCCCCCC
Confidence 455544 6899999999885 78888899999999999999999888 455554342221 1122233434
Q ss_pred CceeehhhhcCCCcceEE--EEecHHHHHhhcCCCCcccccCCCCChHHHHHHHHHHH
Q 011959 307 PDLTTLGKIIGGGLPVGA--YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 362 (474)
Q Consensus 307 pdi~t~sK~l~~G~~iG~--~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 362 (474)
.|...|=++|-..+|+.- -+..+++...+-... .+.+-....+...||.+|++
T Consensus 217 ~ef~~LL~s~e~~LPLr~~S~l~~~~la~~i~~~s---~G~iG~l~~ll~~aA~~AI~ 271 (302)
T PF05621_consen 217 EEFRRLLASFERALPLRKPSNLASPELARRIHERS---EGLIGELSRLLNAAAIAAIR 271 (302)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHc---CCchHHHHHHHHHHHHHHHh
Confidence 444333344443333322 145666766654211 12222223455566666665
No 413
>cd03324 rTSbeta_L-fuconate_dehydratase Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=39.49 E-value=4.2e+02 Score=26.83 Aligned_cols=150 Identities=11% Similarity=0.076 Sum_probs=76.4
Q ss_pred CCCCHHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEE
Q 011959 114 GHADDQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKF 187 (474)
Q Consensus 114 G~~~p~v~~a~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~ 187 (474)
|..++++.+.+.+..++|.. .+...+...+..+.+.+.+++.-.+++ .|.+.. ...|+++++.+.+ -.+..+
T Consensus 194 ~~~~~~~~~~a~~~~~~Gf~~~KiKvg~~~~~d~~~v~avRe~vG~~~~L~vDaN~~w~-~~~A~~~~~~L~~-~~l~~i 271 (415)
T cd03324 194 GYSDEKLRRLCKEALAQGFTHFKLKVGADLEDDIRRCRLAREVIGPDNKLMIDANQRWD-VPEAIEWVKQLAE-FKPWWI 271 (415)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCC-HHHHHHHHHHhhc-cCCCEE
Confidence 44566777777776665421 111222334555666666643224444 565554 4668888777644 345566
Q ss_pred eCCCCCCchhHH-HhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCH
Q 011959 188 EGCYHGHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (474)
Q Consensus 188 ~~~yhg~~~~~~-~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (474)
+...+......+ .+... ....+.|...+ +. ..+..+++++++.. .+..+.+++ ...|.+..
T Consensus 272 EEP~~~~d~~~~~~L~~~-~~~~~iPIa~g-------Es----~~~~~~~~~ll~~~--a~dil~~d~--~~~GGit~-- 333 (415)
T cd03324 272 EEPTSPDDILGHAAIRKA-LAPLPIGVATG-------EH----CQNRVVFKQLLQAG--AIDVVQIDS--CRLGGVNE-- 333 (415)
T ss_pred ECCCCCCcHHHHHHHHHh-cccCCCceecC-------Cc----cCCHHHHHHHHHcC--CCCEEEeCc--cccCCHHH--
Confidence 665544332222 21111 00000111111 00 11567778888743 233444444 33444555
Q ss_pred HHHHHHHHHHHHhCCEEEE
Q 011959 267 DFLNAIRRITKENGALLIF 285 (474)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~ 285 (474)
..++.++|+++|+.+..
T Consensus 334 --~~kia~lA~a~gi~~~p 350 (415)
T cd03324 334 --NLAVLLMAAKFGVPVCP 350 (415)
T ss_pred --HHHHHHHHHHcCCeEEE
Confidence 78899999999987643
No 414
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=39.04 E-value=1.5e+02 Score=23.04 Aligned_cols=58 Identities=19% Similarity=0.306 Sum_probs=34.1
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHhCC-EEEEecccc
Q 011959 232 DVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGA-LLIFDEVMT 290 (474)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~-llI~DEv~~ 290 (474)
+++.++.+.+..+-++..-++-. ...+..... -.+-+++|.++++++++ ++|+|+--+
T Consensus 9 ~l~El~~L~~t~g~~vv~~~~q~~~~~~p~~~i-G~GK~eei~~~~~~~~~d~vvfd~~Ls 68 (95)
T PF13167_consen 9 SLEELEELAETAGYEVVGTVVQKRRKPDPKTYI-GSGKVEEIKELIEELDADLVVFDNELS 68 (95)
T ss_pred HHHHHHHHHHHCCCeEEEEEEecCCCCCcceee-chhHHHHHHHHHhhcCCCEEEECCCCC
Confidence 46777777765444444433332 222333333 34449999999999987 566775444
No 415
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=38.91 E-value=74 Score=28.39 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=28.4
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
..++||||=.+- .|.... .+++.+++++||+.+|.
T Consensus 156 ~Pa~VicEi~~~-dG~mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 156 KPAGVICEIMND-DGTMAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCcEEEEEEeCC-CccccC----hHHHHHHHHHcCCcEEE
Confidence 568899987655 667777 77799999999998884
No 416
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=38.85 E-value=1.7e+02 Score=26.55 Aligned_cols=52 Identities=15% Similarity=0.321 Sum_probs=30.9
Q ss_pred HHHHhcCCCCeEEEEEccccCCC-CcccCC----------HHHHHHHHHHHHHhCCEEE-Eeccc
Q 011959 237 ENLFENNKGEIAAIILEPVVGNS-GFIAPK----------PDFLNAIRRITKENGALLI-FDEVM 289 (474)
Q Consensus 237 e~~l~~~~~~~a~vi~ep~~~~~-G~i~~~----------~~~l~~l~~l~~~~g~llI-~DEv~ 289 (474)
++.+.++ +++..|+++++..-- ...... .+++..|..+|++|++.+| ..++.
T Consensus 107 ~~~l~~~-~~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~tn~~~ 170 (235)
T cd01123 107 EAILIES-SRIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVITNQVT 170 (235)
T ss_pred HHHHhhc-CCeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEeccEe
Confidence 3344433 278899999986421 001111 2456778889999998755 44444
No 417
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=38.77 E-value=71 Score=30.08 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=27.2
Q ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
+-+++-|-...+|.......++++|.++|+++++.+|+
T Consensus 40 a~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 40 PDLVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred CCEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 44566565555555444566799999999999998874
No 418
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=38.33 E-value=74 Score=27.86 Aligned_cols=48 Identities=23% Similarity=0.370 Sum_probs=35.0
Q ss_pred HHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHH---HHHHHHHhCCEEEEeccc
Q 011959 234 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA---IRRITKENGALLIFDEVM 289 (474)
Q Consensus 234 ~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~---l~~l~~~~g~llI~DEv~ 289 (474)
.-++.+.++ +-++.++..+|+ |.|..||..+ +.++|++.|+-||.++ |
T Consensus 13 ~~~~~L~~~-g~~vt~~fyNPN------IhP~~Ey~~R~~~~~~~~~~~~i~~i~~~-Y 63 (176)
T PF02677_consen 13 YPLERLREE-GFDVTGYFYNPN------IHPYEEYERRLEELKRFAEKLGIPLIEGD-Y 63 (176)
T ss_pred HHHHHHHHC-CCCeEEEEeCCC------CCcHHHHHHHHHHHHHHHHHcCCCEEecC-C
Confidence 334444443 347888888886 6788887654 5678999999999998 5
No 419
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=37.17 E-value=52 Score=30.65 Aligned_cols=49 Identities=20% Similarity=0.378 Sum_probs=35.7
Q ss_pred CHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 011959 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287 (474)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DE 287 (474)
+.+.+++.+. +.-++++-|-.|-.-.+. ..+++|.+++++.++.+++|.
T Consensus 91 av~~i~k~L~----RlhavVIGPGLGRdp~~~---k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 91 AVDIIEKLLQ----RLHAVVIGPGLGRDPAIL---KEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hHhHHHHHHh----heeEEEECCCCCCCHHHH---HHHHHHHHHHhcCCCcEEEcC
Confidence 5667777776 678899888665422121 227888999999999999993
No 420
>cd03328 MR_like_3 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 3. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=36.31 E-value=3.3e+02 Score=26.77 Aligned_cols=145 Identities=17% Similarity=0.141 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCC
Q 011959 118 DQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCY 191 (474)
Q Consensus 118 p~v~~a~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (474)
.++.+.+.+..+.|.. .+...+...+..+.+.+.+++.-.+++ .|.+. ....|+++++.+.+ -.+..++...
T Consensus 140 e~~~~~a~~~~~~Gf~~~Kikvg~~~~~d~~~v~~vRe~~G~~~~l~vDaN~~~-~~~~A~~~~~~l~~-~~~~~~EeP~ 217 (352)
T cd03328 140 DRLREQLSGWVAQGIPRVKMKIGRDPRRDPDRVAAARRAIGPDAELFVDANGAY-SRKQALALARAFAD-EGVTWFEEPV 217 (352)
T ss_pred HHHHHHHHHHHHCCCCEEEeecCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCC-CHHHHHHHHHHHHH-hCcchhhCCC
Confidence 4466666665555421 121223334556666666643234555 56554 34568887777643 3455555554
Q ss_pred CCC-chhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHH
Q 011959 192 HGH-ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (474)
Q Consensus 192 hg~-~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (474)
+.. ..+...+..... ...|...+ . . ..+..++.++++.. ++=++.+-....|.+.. ..
T Consensus 218 ~~~d~~~~~~l~~~~~--~~iPIa~g------E-~----~~~~~~~~~li~~~----a~div~~d~~~~GGit~----~~ 276 (352)
T cd03328 218 SSDDLAGLRLVRERGP--AGMDIAAG------E-Y----AYTLAYFRRLLEAH----AVDVLQADVTRCGGVTG----FL 276 (352)
T ss_pred ChhhHHHHHHHHhhCC--CCCCEEec------c-c----ccCHHHHHHHHHcC----CCCEEecCccccCCHHH----HH
Confidence 432 222222221100 00111111 0 0 11678888888742 33344444444455666 88
Q ss_pred HHHHHHHHhCCEEEE
Q 011959 271 AIRRITKENGALLIF 285 (474)
Q Consensus 271 ~l~~l~~~~g~llI~ 285 (474)
++.++|+.+|+.+..
T Consensus 277 ~ia~~A~a~gi~~~~ 291 (352)
T cd03328 277 QAAALAAAHHVDLSA 291 (352)
T ss_pred HHHHHHHHcCCeecc
Confidence 899999999986653
No 421
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=35.99 E-value=86 Score=21.94 Aligned_cols=45 Identities=7% Similarity=-0.070 Sum_probs=34.6
Q ss_pred HHHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 427 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 427 ~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
..++.+.|.+.+|.+...+.....+++...+++.++++.+|-+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~~s~~~is~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQAANDLNLTFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEeCCCCeEEEEEeHHHHHHHHHHHHHHH
Confidence 356677777788877655555677888889999999999997765
No 422
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=35.64 E-value=3.6e+02 Score=25.97 Aligned_cols=40 Identities=25% Similarity=0.504 Sum_probs=29.2
Q ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011959 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291 (474)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (474)
|.+..-+.-+|.-.|.+|.++.+..+++..|+ ++|=||+|
T Consensus 245 v~~~~dy~~~~Yg~p~~e~~e~i~~~~~~eGi--llDpVYtg 284 (323)
T COG2515 245 VLLSDDYHHPGYGKPNEEDIEAIKLLARLEGI--LLDPVYTG 284 (323)
T ss_pred EEEEecccCCccCCcCHHHHHHHHHHHHhhCc--ccccccch
Confidence 33333334445667788889999999999997 57999986
No 423
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=33.73 E-value=4.4e+02 Score=25.33 Aligned_cols=144 Identities=15% Similarity=0.127 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEEeCC
Q 011959 117 DDQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGC 190 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~ 190 (474)
++++.+.+.+..+.|.. .+...+...+.-+.+.+.++ .-.+.+ +|++..- +-|++.++.+.+- .+..++..
T Consensus 135 ~~~~~~~~~~~~~~Gf~~iKik~g~~~~~d~~~v~~lr~~~g-~~~l~vD~n~~~~~-~~A~~~~~~l~~~-~l~~iEeP 211 (316)
T cd03319 135 PEAMAAAAKKAAKRGFPLLKIKLGGDLEDDIERIRAIREAAP-DARLRVDANQGWTP-EEAVELLRELAEL-GVELIEQP 211 (316)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCChhhHHHHHHHHHHhCC-CCeEEEeCCCCcCH-HHHHHHHHHHHhc-CCCEEECC
Confidence 45566666666665421 12222334556666666665 224444 5655543 5677777666433 46666666
Q ss_pred CCCCchhHHH-hcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHH
Q 011959 191 YHGHADPFLV-KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 269 (474)
Q Consensus 191 yhg~~~~~~~-~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l 269 (474)
+.......+. +... ...|...+ -...+.++++++++.. ....|.+.+.. .|.+.. .
T Consensus 212 ~~~~d~~~~~~L~~~----~~ipIa~~-----------E~~~~~~~~~~~~~~~--~~d~v~~~~~~--~GGi~~----~ 268 (316)
T cd03319 212 VPAGDDDGLAYLRDK----SPLPIMAD-----------ESCFSAADAARLAGGG--AYDGINIKLMK--TGGLTE----A 268 (316)
T ss_pred CCCCCHHHHHHHHhc----CCCCEEEe-----------CCCCCHHHHHHHHhcC--CCCEEEEeccc--cCCHHH----H
Confidence 6543222221 1111 00111000 0112688888888753 45677777644 344555 7
Q ss_pred HHHHHHHHHhCCEEEEe
Q 011959 270 NAIRRITKENGALLIFD 286 (474)
Q Consensus 270 ~~l~~l~~~~g~llI~D 286 (474)
.++.++|++||+.++.=
T Consensus 269 ~~~~~~a~~~gi~~~~~ 285 (316)
T cd03319 269 LRIADLARAAGLKVMVG 285 (316)
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 88999999999977753
No 424
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=32.98 E-value=4.8e+02 Score=25.53 Aligned_cols=144 Identities=16% Similarity=0.156 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHHHhcCC-----CCCCC------HHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEE
Q 011959 117 DDQVLAALGETMKKGTS-----FGAPC------LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERI 184 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~-----~~~~~------~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~i 184 (474)
..++.+++.+..+.|.. .+... +...+.-+.+.+.++..-.+.+ .|++. ..+.|+++++.+..- .+
T Consensus 140 ~~~~~~~a~~~~~~Gf~~~Kik~g~~~~~~~~~~~d~~~v~~ir~~~g~~~~l~vDaN~~~-~~~~a~~~~~~l~~~-~i 217 (357)
T cd03316 140 PEELAEEAKRAVAEGFTAVKLKVGGPDSGGEDLREDLARVRAVREAVGPDVDLMVDANGRW-DLAEAIRLARALEEY-DL 217 (357)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCcchHHHHHHHHHHHHHHHhhCCCCEEEEECCCCC-CHHHHHHHHHHhCcc-CC
Confidence 45577777776665421 12111 3344555666666642223444 46555 356677777666442 35
Q ss_pred EEEeCCCCCC-chhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCccc
Q 011959 185 IKFEGCYHGH-ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 263 (474)
Q Consensus 185 i~~~~~yhg~-~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~ 263 (474)
..++..++.. ......+... ...|...+ -...++++++++++.. ..-.|-+.+ ...|.+.
T Consensus 218 ~~iEqP~~~~~~~~~~~l~~~----~~ipi~~d-----------E~~~~~~~~~~~i~~~--~~d~v~~k~--~~~GGi~ 278 (357)
T cd03316 218 FWFEEPVPPDDLEGLARLRQA----TSVPIAAG-----------ENLYTRWEFRDLLEAG--AVDIIQPDV--TKVGGIT 278 (357)
T ss_pred CeEcCCCCccCHHHHHHHHHh----CCCCEEec-----------cccccHHHHHHHHHhC--CCCEEecCc--cccCCHH
Confidence 5555544332 2222111111 00110000 0012688899888753 233444444 3344455
Q ss_pred CCHHHHHHHHHHHHHhCCEEEE
Q 011959 264 PKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 264 ~~~~~l~~l~~l~~~~g~llI~ 285 (474)
. ..++.++|+++|+.++.
T Consensus 279 ~----~~~i~~~a~~~g~~~~~ 296 (357)
T cd03316 279 E----AKKIAALAEAHGVRVAP 296 (357)
T ss_pred H----HHHHHHHHHHcCCeEec
Confidence 5 77899999999987654
No 425
>cd03320 OSBS o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway. Menaquinone is an essential cofactor for anaerobic growth in eubacteria and some archaea. OSBS belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=32.47 E-value=4.2e+02 Score=24.71 Aligned_cols=147 Identities=18% Similarity=0.196 Sum_probs=75.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCC-----CCCCC-HHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEE
Q 011959 113 IGHADDQVLAALGETMKKGTS-----FGAPC-LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERII 185 (474)
Q Consensus 113 lG~~~p~v~~a~~~~~~~~~~-----~~~~~-~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii 185 (474)
++...++..+.+.+..+.|.. .+... +...+..+.+.+.+++.-++.+ .|.+. ....|+++++.+.. ..+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~Gf~~~KiKvg~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~w-~~~~A~~~~~~l~~-~~i~ 156 (263)
T cd03320 79 LPAGDAAALGEAKAAYGGGYRTVKLKVGATSFEEDLARLRALREALPADAKLRLDANGGW-SLEEALAFLEALAA-GRIE 156 (263)
T ss_pred ecCCCHHHHHHHHHHHhCCCCEEEEEECCCChHHHHHHHHHHHHHcCCCCeEEEeCCCCC-CHHHHHHHHHhhcc-cCCc
Confidence 344455555555555554421 11111 3345566666676653334555 56555 34667877766644 4455
Q ss_pred EEeCCCCCCch-hHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccC
Q 011959 186 KFEGCYHGHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 264 (474)
Q Consensus 186 ~~~~~yhg~~~-~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~ 264 (474)
.++........ ...... . ..|...+ +. ..++.++.++++.. ....+.+.+.. .|.+..
T Consensus 157 ~iEqP~~~~d~~~~~~l~-~-----~~PIa~d-------Es----~~~~~~~~~~~~~~--~~d~v~~k~~~--~GGit~ 215 (263)
T cd03320 157 YIEQPLPPDDLAELRRLA-A-----GVPIALD-------ES----LRRLDDPLALAAAG--ALGALVLKPAL--LGGPRA 215 (263)
T ss_pred eEECCCChHHHHHHHHhh-c-----CCCeeeC-------Cc----cccccCHHHHHhcC--CCCEEEECchh--cCCHHH
Confidence 66655543222 221221 1 0111111 00 01345566677642 34566666643 344555
Q ss_pred CHHHHHHHHHHHHHhCCEEEEe
Q 011959 265 KPDFLNAIRRITKENGALLIFD 286 (474)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~D 286 (474)
..++.++|+++|+.+..-
T Consensus 216 ----~~~i~~~a~~~gi~~~~~ 233 (263)
T cd03320 216 ----LLELAEEARARGIPAVVS 233 (263)
T ss_pred ----HHHHHHHHHHcCCCEEEE
Confidence 888999999999987764
No 426
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=31.37 E-value=3e+02 Score=26.79 Aligned_cols=52 Identities=15% Similarity=0.264 Sum_probs=30.0
Q ss_pred HHHHHhcCCCCeEEEEEccccCCC---------Cccc--CC----HHHHHHHHHHHHHhCCEEE-Eeccc
Q 011959 236 LENLFENNKGEIAAIILEPVVGNS---------GFIA--PK----PDFLNAIRRITKENGALLI-FDEVM 289 (474)
Q Consensus 236 le~~l~~~~~~~a~vi~ep~~~~~---------G~i~--~~----~~~l~~l~~l~~~~g~llI-~DEv~ 289 (474)
++.++++ ..+..|+++++..-. |.-. .. ..+|..|..+++++|+.+| ..+++
T Consensus 125 ~~~li~~--~~~~lIVIDSv~al~~~~E~e~~~g~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi~tNQvr 192 (321)
T TIGR02012 125 AETLVRS--GAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSKSNTTAIFINQIR 192 (321)
T ss_pred HHHHhhc--cCCcEEEEcchhhhccchhhcccccccchhHHHHHHHHHHHHHHHHHHhCCCEEEEEecce
Confidence 3444443 367889999876421 1100 00 1357778888999998765 44444
No 427
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=31.30 E-value=66 Score=25.73 Aligned_cols=48 Identities=6% Similarity=0.126 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHCCeEecc----cCC---cceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 425 TKFARFYRGMLEEGVYFAP----SQF---EAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 425 ~~~~~~~~~l~~~Gv~v~~----~~~---~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
+....+.+.|.++|+.+.- +|+ +...+-....++++|+.++++++.++
T Consensus 11 ~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlliGvede~v~~vl~iIk~~c~ 65 (109)
T PF06153_consen 11 EDADDLSDALNENGFRVTKLSSTGGFLREGNTTLLIGVEDEKVDEVLEIIKENCK 65 (109)
T ss_dssp HHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHCCceEEEEecccceeccCCEEEEEEecHHHHHHHHHHHHHhhc
Confidence 4457889999999987643 221 11234567789999999999998765
No 428
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=31.18 E-value=1e+02 Score=31.69 Aligned_cols=57 Identities=11% Similarity=0.170 Sum_probs=37.1
Q ss_pred EEccCCCHHHHHHHHhcCCCCeEEEEEccccCCC--------CcccCCHHHHHHHHHHHHHhCCEEE
Q 011959 226 LTAPFNDVSALENLFENNKGEIAAIILEPVVGNS--------GFIAPKPDFLNAIRRITKENGALLI 284 (474)
Q Consensus 226 ~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~--------G~i~~~~~~l~~l~~l~~~~g~llI 284 (474)
+.+...+++.+.+.+++. +...|++++++... |....-.+++..|.++++++|+.++
T Consensus 152 ~~~~e~~~~~I~~~i~~~--~~~~vVIDSIq~l~~~~~~~~~g~~~q~r~~~~~L~~~ak~~giTvl 216 (454)
T TIGR00416 152 YVLSETNWEQICANIEEE--NPQACVIDSIQTLYSPDISSAPGSVSQVRECTAELMRLAKTRGIAIF 216 (454)
T ss_pred EEcCCCCHHHHHHHHHhc--CCcEEEEecchhhcccccccCCCCHHHHHHHHHHHHHHHHHhCCEEE
Confidence 334445788888888754 56789999987531 1111123456678899999997544
No 429
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=30.86 E-value=40 Score=25.41 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCEEEEecccc
Q 011959 269 LNAIRRITKENGALLIFDEVMT 290 (474)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~ 290 (474)
-++|+++++++|++++.|....
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 6789999999999999998764
No 430
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=30.11 E-value=33 Score=32.81 Aligned_cols=22 Identities=18% Similarity=0.382 Sum_probs=19.1
Q ss_pred HHHHHHHHH-HhCCEEEEecccc
Q 011959 269 LNAIRRITK-ENGALLIFDEVMT 290 (474)
Q Consensus 269 l~~l~~l~~-~~g~llI~DEv~~ 290 (474)
|+.|.++|. .++.+||+||.|-
T Consensus 161 l~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 161 LDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred HHHHHHHHhcCCCceEEeccchh
Confidence 899999994 4788999999993
No 431
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=29.85 E-value=1.2e+02 Score=21.20 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=34.8
Q ss_pred HHHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHHHh
Q 011959 427 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLR 472 (474)
Q Consensus 427 ~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~~ 472 (474)
..++...|.+.||-+.........+++...+++.++++.+|.+.+.
T Consensus 18 ~~~if~aL~~~~I~v~~~~~Se~~is~~v~~~~~~~av~~Lh~~f~ 63 (64)
T cd04937 18 MAKIVGALSKEGIEILQTADSHTTISCLVSEDDVKEAVNALHEAFE 63 (64)
T ss_pred HHHHHHHHHHCCCCEEEEEcCccEEEEEEcHHHHHHHHHHHHHHhc
Confidence 4577888889998765443334677888899999999999987663
No 432
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=29.44 E-value=1.3e+02 Score=26.41 Aligned_cols=39 Identities=28% Similarity=0.477 Sum_probs=25.1
Q ss_pred CeEEEEEccccCC----CC-cccCCHHHHHHHHHHHHHhCCEEE
Q 011959 246 EIAAIILEPVVGN----SG-FIAPKPDFLNAIRRITKENGALLI 284 (474)
Q Consensus 246 ~~a~vi~ep~~~~----~G-~i~~~~~~l~~l~~l~~~~g~llI 284 (474)
....|++.|.... .+ .-..-..|-+.++++|+++|+.++
T Consensus 107 ~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 107 GATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred CCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 3456677765421 11 122345778899999999998774
No 433
>KOG1564 consensus DNA repair protein RHP57 [Replication, recombination and repair]
Probab=29.22 E-value=3.6e+02 Score=25.78 Aligned_cols=64 Identities=14% Similarity=0.241 Sum_probs=41.3
Q ss_pred CCceEEccCCCHHHHHHHHhc------CCCCeEEEEEccccCCC--------CcccCCHHHHH----HHHHHHHHhCCEE
Q 011959 222 TYETLTAPFNDVSALENLFEN------NKGEIAAIILEPVVGNS--------GFIAPKPDFLN----AIRRITKENGALL 283 (474)
Q Consensus 222 ~~~~~~~~~~d~~~le~~l~~------~~~~~a~vi~ep~~~~~--------G~i~~~~~~l~----~l~~l~~~~g~ll 283 (474)
+..++....+|++.++.++.. +.+.++.||++++-..- ....+...++. +|+.++++|+..+
T Consensus 177 gd~IFv~~~~d~d~l~~iv~~qlPiL~~r~~i~LVIiDSVAa~fR~E~d~~~Sdl~~r~~~l~rla~~Lr~LA~~~~~aV 256 (351)
T KOG1564|consen 177 GDHIFVENVHDVDHLLHIVNRQLPILLNRKKIKLVIIDSVAALFRSEFDYNPSDLKKRARHLFRLAGKLRQLASKFDLAV 256 (351)
T ss_pred CceEEEEeccchhhHHHHHhhhccceeccCcceEEEEehhhHHHHHHhccChhhhhhHHHHHHHHHHHHHHHHHhcCccE
Confidence 445667777799999887763 23468999999875321 12222244443 4667899999866
Q ss_pred EE
Q 011959 284 IF 285 (474)
Q Consensus 284 I~ 285 (474)
++
T Consensus 257 V~ 258 (351)
T KOG1564|consen 257 VC 258 (351)
T ss_pred EE
Confidence 54
No 434
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=29.02 E-value=1.4e+02 Score=21.15 Aligned_cols=46 Identities=20% Similarity=0.178 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHCCeEec--ccCCcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 426 KFARFYRGMLEEGVYFA--PSQFEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 426 ~~~~~~~~l~~~Gv~v~--~~~~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
...++.+.|.+.||-+. ..+.....+++...+++.++++.+|.+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEEEEEEHHHHHHHHHHHHHHH
Confidence 34677888889988662 22323467888889999999999998765
No 435
>cd07576 R-amidase_like Pseudomonas sp. MCI3434 R-amidase and related proteins (putative class 13 nitrilases). Pseudomonas sp. MCI3434 R-amidase hydrolyzes (R,S)-piperazine-2-tert-butylcarboxamide to form (R)-piperazine-2-carboxylic acid. It does so with strict R-stereoselectively. Its preferred substrates are carboxamide compounds which have the amino or imino group connected to their beta- or gamma-carbon. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group. It has been suggested that this subgroup represents a new class. Members of the nitrilase superfamily generally form homomeric compl
Probab=28.78 E-value=75 Score=29.34 Aligned_cols=53 Identities=17% Similarity=0.292 Sum_probs=31.6
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCccc----------CCHHHHHHHHHHHHHhCCEEEE
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIA----------PKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~----------~~~~~l~~l~~l~~~~g~llI~ 285 (474)
++.+++++++...+-+-+++-|-...+|... ...++++.+.++++++++.+|+
T Consensus 18 ~~~i~~~i~~a~~~ga~lvv~PE~~l~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 80 (254)
T cd07576 18 LARLDEAAARAAAAGADLLVFPELFLTGYNIGDAVARLAEPADGPALQALRAIARRHGIAIVV 80 (254)
T ss_pred HHHHHHHHHHHHHcCCCEEEccCccccCCCCcchhhhhhcccCChHHHHHHHHHHHcCCEEEE
Confidence 4455555543212224456656544444322 2345799999999999998885
No 436
>PHA00008 J DNA packaging protein
Probab=28.75 E-value=36 Score=18.89 Aligned_cols=16 Identities=25% Similarity=0.856 Sum_probs=12.7
Q ss_pred EeeccCEEEEcCCCEE
Q 011959 86 DSVKGSHMWDIDGNEY 101 (474)
Q Consensus 86 ~~~~G~~~~d~dG~~~ 101 (474)
.+.+|+++|-+.|..|
T Consensus 10 ~r~KGARLWYVGGtQf 25 (26)
T PHA00008 10 SRRKGARLWYVGGTQF 25 (26)
T ss_pred CccCceEEEEeccEEc
Confidence 4678999998877665
No 437
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=28.74 E-value=1.4e+02 Score=27.24 Aligned_cols=54 Identities=11% Similarity=0.126 Sum_probs=33.5
Q ss_pred CHHHHHHHHhcC--CCCeEEEEEccccCC-CCc-ccCC----HHHHHHHHHHHHHhCCEEEE
Q 011959 232 DVSALENLFENN--KGEIAAIILEPVVGN-SGF-IAPK----PDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 232 d~~~le~~l~~~--~~~~a~vi~ep~~~~-~G~-i~~~----~~~l~~l~~l~~~~g~llI~ 285 (474)
+++.+++.++.. ..++..|++++++.. .+. -... ..+++.|+++|+++|+.+|+
T Consensus 107 ~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 107 TVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 566665544321 126789999998743 121 0111 24578899999999998774
No 438
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=28.71 E-value=2e+02 Score=23.13 Aligned_cols=46 Identities=20% Similarity=0.181 Sum_probs=30.4
Q ss_pred HHHHHHHhcCCCCeEEEEEcccc-CCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 234 SALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 234 ~~le~~l~~~~~~~a~vi~ep~~-~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
..+.+++.+ +++..||..|.+ +..+.. .+ -..|++.|-+|++.++.
T Consensus 60 ~~i~~~i~~--g~i~~VInt~~~~~~~~~~--~d--g~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 60 QQIGALIAE--GEIDAVIFFRDPLTAQPHE--PD--VKALLRLCDVYNIPLAT 106 (115)
T ss_pred hHHHHHHHc--CceeEEEEcCCCCCCCccc--cc--HHHHHHHHHHcCCCEEE
Confidence 345556664 378888887754 432211 22 56899999999998874
No 439
>PF00154 RecA: recA bacterial DNA recombination protein; InterPro: IPR013765 The recA gene product is a multifunctional enzyme that plays a role in homologous recombination, DNA repair and induction of the SOS response []. In homologous recombination, the protein functions as a DNA-dependent ATPase, promoting synapsis, heteroduplex formation and strand exchange between homologous DNAs []. RecA also acts as a protease cofactor that promotes autodigestion of the lexA product and phage repressors. The proteolytic inactivation of the lexA repressor by an activated form of recA may cause a derepression of the 20 or so genes involved in the SOS response, which regulates DNA repair, induced mutagenesis, delayed cell division and prophage induction in response to DNA damage []. RecA is a protein of about 350 amino-acid residues. Its sequence is very well conserved [, , ] among eubacterial species. It is also found in the chloroplast of plants []. RecA-like proteins are found in archaea and diverse eukaryotic organisms, like fission yeast, mouse or human. In the filament visualised by X-ray crystallography, beta-strand 3, the loop C-terminal to beta-strand 2, and alpha-helix D of the core domain form one surface that packs against alpha-helix A and beta-strand 0 (the N-terminal domain) of an adjacent monomer during polymerisation []. The core ATP-binding site domain is well conserved, with 14 invariant residues. It contains the nucleotide binding loop between beta-strand 1 and alpha-helix C. The Escherichia coli sequence GPESSGKT matches the consensus sequence of amino acids (G/A)XXXXGK(T/S) for the Walker A box (also referred to as the P-loop) found in a number of nucleoside triphosphate (NTP)-binding proteins. Another nucleotide binding motif, the Walker B box is found at beta-strand 4 in the RecA structure. The Walker B box is characterised by four hydrophobic amino acids followed by an acidic residue (usually aspartate). Nucleotide specificity and additional ATP binding interactions are contributed by the amino acid residues at beta-strand 2 and the loop C-terminal to that strand, all of which are greater than 90% conserved among bacterial RecA proteins.; GO: 0003697 single-stranded DNA binding, 0005524 ATP binding, 0006281 DNA repair; PDB: 2IN0_A 1MO3_A 3IFJ_A 2IN8_A 2IMZ_B 1G18_A 1MO4_A 3IGD_A 2L8L_A 2IN9_A ....
Probab=28.47 E-value=4.4e+02 Score=25.66 Aligned_cols=109 Identities=15% Similarity=0.193 Sum_probs=50.6
Q ss_pred EEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCC----HH
Q 011959 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND----VS 234 (474)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d----~~ 234 (474)
++.+.++--...++...+.+...+.+++|-.+=|......+...|.... +++.++.+. ++
T Consensus 58 i~G~~ssGKttLaL~~ia~~q~~g~~~a~ID~e~~ld~~~a~~lGvdl~----------------rllv~~P~~~E~al~ 121 (322)
T PF00154_consen 58 IYGPESSGKTTLALHAIAEAQKQGGICAFIDAEHALDPEYAESLGVDLD----------------RLLVVQPDTGEQALW 121 (322)
T ss_dssp EEESTTSSHHHHHHHHHHHHHHTT-EEEEEESSS---HHHHHHTT--GG----------------GEEEEE-SSHHHHHH
T ss_pred EeCCCCCchhhhHHHHHHhhhcccceeEEecCcccchhhHHHhcCcccc----------------ceEEecCCcHHHHHH
Confidence 4566555556666655444433344444433444444333433343211 123222222 44
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCC------Cccc---------CCHHHHHHHHHHHHHhCCEEEE
Q 011959 235 ALENLFENNKGEIAAIILEPVVGNS------GFIA---------PKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~~~~------G~i~---------~~~~~l~~l~~l~~~~g~llI~ 285 (474)
.++.+++. +.+.+|+++++-... |.+- .-..+++.|...+.++++.+|+
T Consensus 122 ~~e~lirs--g~~~lVVvDSv~al~p~~E~e~~~~~~~~g~~Ar~ms~~lr~lt~~l~~~~~~~i~ 185 (322)
T PF00154_consen 122 IAEQLIRS--GAVDLVVVDSVAALVPKAELEGEIGDQQVGLQARLMSQALRKLTPLLSKSNTTLIF 185 (322)
T ss_dssp HHHHHHHT--TSESEEEEE-CTT-B-HHHHTTSTSSTSSSHHHHHHHHHHHHHHHHHHTTT-EEEE
T ss_pred HHHHHhhc--ccccEEEEecCcccCCHHHHhhccccccCcchHHHHHHHHHHHHHHHHhhceEEEE
Confidence 55666664 356788888864321 1111 1124577777788888887774
No 440
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=28.44 E-value=1.4e+02 Score=26.63 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=27.6
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
..+++|+|=+.- .|.... ++++.+++++||+.+|.
T Consensus 152 ~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 568888887754 677888 88899999999999884
No 441
>COG3392 Adenine-specific DNA methylase [DNA replication, recombination, and repair]
Probab=28.24 E-value=5.1e+02 Score=24.43 Aligned_cols=55 Identities=24% Similarity=0.314 Sum_probs=38.0
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCC
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (474)
.++++++|.. ..+-+|+-+.+++ |. +. .++|.++..++|..=|+.+-|--||+++
T Consensus 259 ~~af~eLI~d---~k~kyIlLSYNne-g~-~s----~e~i~eiL~k~G~~~ife~~Y~~Fra~k 313 (330)
T COG3392 259 TQAFEELISD---AKFKYILLSYNNE-GL-MS----EEEILEILEKYGKYSIFETTYKRFRADK 313 (330)
T ss_pred HHHHHHHHhh---cCccEEEEecCcc-cc-cc----HHHHHHHHHhcCcEEEehhHHHHHhccc
Confidence 4567778874 2345566565555 43 44 6678899999999999988886666553
No 442
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=28.06 E-value=5.8e+02 Score=24.99 Aligned_cols=38 Identities=8% Similarity=0.149 Sum_probs=24.3
Q ss_pred CCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCC
Q 011959 155 IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (474)
Q Consensus 155 ~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (474)
.+-++-.+||-++...+..+...+.-+...+.++.+|.
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~ 97 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWN 97 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCC
Confidence 56778889999988877554444433333466666654
No 443
>PRK11823 DNA repair protein RadA; Provisional
Probab=28.00 E-value=1.2e+02 Score=31.00 Aligned_cols=55 Identities=11% Similarity=0.264 Sum_probs=35.8
Q ss_pred cCCCHHHHHHHHhcCCCCeEEEEEccccCCC--------CcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 229 PFNDVSALENLFENNKGEIAAIILEPVVGNS--------GFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 229 ~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~--------G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
.-.+++.+.+.+++. ++..||+++++... |....-.+++..|.++++++|+.+++
T Consensus 141 ~e~~l~~i~~~i~~~--~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 141 AETNLEAILATIEEE--KPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred CCCCHHHHHHHHHhh--CCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 334788887777654 56789999987531 11111124456789999999986553
No 444
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.90 E-value=1.2e+02 Score=26.27 Aligned_cols=40 Identities=23% Similarity=0.164 Sum_probs=23.7
Q ss_pred CCeEEEEEccccCCCCcc--cC----CHHHHHHHHHHHHHhCCEEE
Q 011959 245 GEIAAIILEPVVGNSGFI--AP----KPDFLNAIRRITKENGALLI 284 (474)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i--~~----~~~~l~~l~~l~~~~g~llI 284 (474)
.+...+++.|.+...... .. ..++-+.++++|+++++.+|
T Consensus 107 ~~~~iil~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 107 SKPKIYICYPIPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred CCCeEEEEeCCcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEE
Confidence 355666776643221111 11 13456788999999998776
No 445
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=27.74 E-value=2.6e+02 Score=20.91 Aligned_cols=45 Identities=9% Similarity=0.264 Sum_probs=30.1
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DE 287 (474)
.+...+.|++ ++..+||+-..- ++...+.+..+|+++++.++.-+
T Consensus 16 ~~~v~kai~~--gkaklViiA~D~--------~~~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKR--GSVKEVVVAEDA--------DPRLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHc--CCeeEEEEECCC--------CHHHHHHHHHHHHHcCCCEEEEC
Confidence 4555666664 366677764432 22458899999999999887543
No 446
>KOG2792 consensus Putative cytochrome C oxidase assembly protein [Energy production and conversion]
Probab=27.64 E-value=1.6e+02 Score=27.43 Aligned_cols=82 Identities=23% Similarity=0.303 Sum_probs=49.3
Q ss_pred EEEEcCCCEEE--eccCChhhccCCCCC-----HHHHHHHHHHHHhcC-CCCC----------C-CHHHHHHHHHHHhhC
Q 011959 92 HMWDIDGNEYI--DYVGSWGPAIIGHAD-----DQVLAALGETMKKGT-SFGA----------P-CLLENVLAEMVISAV 152 (474)
Q Consensus 92 ~~~d~dG~~~i--D~~~~~~~~~lG~~~-----p~v~~a~~~~~~~~~-~~~~----------~-~~~~~~la~~l~~~~ 152 (474)
.+.|.+|+..- ||.+.|.-.|+|+.| |+=++.|...++... ..+. | .+....+++.+.+++
T Consensus 123 ~L~d~~Gk~~te~df~Gkw~LiYFGFThCPDICPdELeKm~~~Vd~i~~~~~~~~~PlFIsvDPeRD~~~~~~eY~~eF~ 202 (280)
T KOG2792|consen 123 SLVDHDGKRVTEKDFLGKWSLIYFGFTHCPDICPDELEKMSAVVDEIEAKPGLPPVPLFISVDPERDSVEVVAEYVSEFH 202 (280)
T ss_pred EEEecCCCeecccccccceEEEEecccCCCCcChHHHHHHHHHHHHHhccCCCCccceEEEeCcccCCHHHHHHHHHhcC
Confidence 35667777664 688888888999743 555565666555321 0110 1 234577888888877
Q ss_pred CCCCeEEEeCCHHHHHHHHHHHhH
Q 011959 153 PSIEMVRFVNSGTEACMGVLRLAR 176 (474)
Q Consensus 153 ~~~~~v~~~~sGseA~~~al~~ar 176 (474)
| +++=..|-+|.+..+.+--|
T Consensus 203 p---kllGLTGT~eqvk~vak~yR 223 (280)
T KOG2792|consen 203 P---KLLGLTGTTEQVKQVAKKYR 223 (280)
T ss_pred h---hhhcccCCHHHHHHHHHHhE
Confidence 5 34444556677776666333
No 447
>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=27.44 E-value=3.5e+02 Score=26.37 Aligned_cols=45 Identities=9% Similarity=0.190 Sum_probs=27.2
Q ss_pred CeEEEEEccccCCCC------cccC------C---HHHHHHHHHHHHHhCCEEE-Eecccc
Q 011959 246 EIAAIILEPVVGNSG------FIAP------K---PDFLNAIRRITKENGALLI-FDEVMT 290 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G------~i~~------~---~~~l~~l~~l~~~~g~llI-~DEv~~ 290 (474)
.+..|+++++..-.. ..-. . ..+|..|..+++++++.+| ..+++.
T Consensus 133 ~~~lIVIDSvaal~~~~E~~~~~~~~~~~~qaR~l~~~Lr~L~~~~~k~~~~vI~tNQvr~ 193 (325)
T cd00983 133 AVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSINKSNTTVIFINQLRE 193 (325)
T ss_pred CCCEEEEcchHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 678899998754211 0100 0 1356778888899998766 444443
No 448
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=26.86 E-value=1.7e+02 Score=26.24 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=28.2
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
..+++|+|=+.- .|.... ++++.+++++||+.+|.
T Consensus 157 ~p~~vicEil~~-dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEMMND-DGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 458888887644 677777 78899999999999873
No 449
>cd07581 nitrilase_3 Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=26.45 E-value=74 Score=29.44 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=31.1
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccCC-----------HHHHHHHHHHHHHhCCEEEE
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPK-----------PDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~-----------~~~l~~l~~l~~~~g~llI~ 285 (474)
++.+++.+++...+-+-+|+-|-...+|..... ..+++.++++|+++++.+++
T Consensus 16 ~~~~~~~i~~a~~~g~dlivfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~ 79 (255)
T cd07581 16 LEKVRRLLAEAAAAGADLVVFPEYTMARFGDGLDDYARVAEPLDGPFVSALARLARELGITVVA 79 (255)
T ss_pred HHHHHHHHHHHHHcCCCEEECcchhcCCCCcchhhHHhhhccCCCHHHHHHHHHHHHcCeEEEE
Confidence 444555554311122445665655545543221 25689999999999998884
No 450
>cd04923 ACT_AK-LysC-DapG-like_2 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the second and fourth, of four, ACT domains present in cyanobacteria AK. Also included are the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (B. subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=26.36 E-value=1.4e+02 Score=20.22 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=31.6
Q ss_pred HHHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 427 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 427 ~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
..++...|.+.|+-+.-.......+++...+++.++++++|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~~v~~~~~~~~~~~l~~~l 61 (63)
T cd04923 17 AAKMFKALAEAGINIEMISTSEIKISCLVDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCCEEEEEccCCeEEEEEeHHHHHHHHHHHHHHh
Confidence 356778888888654332222356778888899999999988765
No 451
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=25.91 E-value=86 Score=20.26 Aligned_cols=22 Identities=14% Similarity=0.265 Sum_probs=17.7
Q ss_pred CCHHHHHHHHHHHHHhCCEEEE
Q 011959 264 PKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 264 ~~~~~l~~l~~l~~~~g~llI~ 285 (474)
.+-+|++.|.+++++||+.=|+
T Consensus 14 Dp~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 14 DPLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred CHHHHHHHHHHHHhhCCEEEEE
Confidence 4567899999999999987553
No 452
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=25.71 E-value=6.4e+02 Score=24.66 Aligned_cols=38 Identities=21% Similarity=0.285 Sum_probs=25.3
Q ss_pred CeEEEEE--ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 246 EIAAIIL--EPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 246 ~~a~vi~--ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
++-.||+ +.+..||+.+..-- --.+.-+|++||+.+++
T Consensus 215 ~Vd~VivGAd~I~aNG~v~NKiG--T~~lAl~Ak~~~VPfyV 254 (329)
T PRK06371 215 EIDLVIVGADRIASNGDFANKIG--TYEKAVLAKVNGIPFYV 254 (329)
T ss_pred CCCEEEECccEEecCCCEeehhh--HHHHHHHHHHcCCCEEE
Confidence 3445554 67777777665433 34477789999998775
No 453
>PRK09354 recA recombinase A; Provisional
Probab=25.59 E-value=4.9e+02 Score=25.68 Aligned_cols=53 Identities=13% Similarity=0.310 Sum_probs=30.8
Q ss_pred HHHHHhcCCCCeEEEEEccccCCC------CcccC-----C----HHHHHHHHHHHHHhCCEEE-Eecccc
Q 011959 236 LENLFENNKGEIAAIILEPVVGNS------GFIAP-----K----PDFLNAIRRITKENGALLI-FDEVMT 290 (474)
Q Consensus 236 le~~l~~~~~~~a~vi~ep~~~~~------G~i~~-----~----~~~l~~l~~l~~~~g~llI-~DEv~~ 290 (474)
++.++++ ..+..|+++++..-. |..-. . ..+|..|..+++++++.+| ..+++.
T Consensus 130 ~~~li~s--~~~~lIVIDSvaaL~~~~E~eg~~gd~~~~~qar~ms~~Lr~L~~~l~k~~itvI~tNQvr~ 198 (349)
T PRK09354 130 ADTLVRS--GAVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNISKSNTTVIFINQIRE 198 (349)
T ss_pred HHHHhhc--CCCCEEEEeChhhhcchhhhcCCccccchhHHHHHHHHHHHHHHHHHHHcCcEEEEEEeeee
Confidence 3444443 367899999976431 11000 0 1236778888899999766 455553
No 454
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=25.40 E-value=6.2e+02 Score=24.43 Aligned_cols=139 Identities=13% Similarity=0.116 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeC--CCCCC
Q 011959 117 DDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG--CYHGH 194 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~--~yhg~ 194 (474)
..++++.+.+.+++.... .......+++.-.++..+ ..+++|-+-|..+...|+.|....++-+|++.+. .+.|
T Consensus 85 ~~~~k~~l~e~~~~~~~e--~~~~~~~I~~~a~~~i~~-g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G- 160 (310)
T PRK08535 85 VEEARESVIERAEEFIES--SENAVEKIGEIGAKRIRD-GDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG- 160 (310)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHcCC-CCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-
Confidence 355555555554442110 122335566655566544 3467777777777778776543334455666544 2233
Q ss_pred chhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEE--EccccCCCCcccCCHHHHHHH
Q 011959 195 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII--LEPVVGNSGFIAPKPDFLNAI 272 (474)
Q Consensus 195 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi--~ep~~~~~G~i~~~~~~l~~l 272 (474)
...+-.+... |+ ++..++ | .++-.++. ++-.|+ .+.+..|||.+...- --.+
T Consensus 161 ~~~a~~L~~~-----------GI------~vtlI~--D-sav~~~m~----~vd~VivGAd~v~~nG~v~nkiG--T~~~ 214 (310)
T PRK08535 161 HITAKELAEY-----------GI------PVTLIV--D-SAVRYFMK----DVDKVVVGADAITANGAVINKIG--TSQI 214 (310)
T ss_pred HHHHHHHHHC-----------CC------CEEEEe--h-hHHHHHHH----hCCEEEECccEEecCCCEEeHHh--HHHH
Confidence 2222222111 22 122222 2 23333444 244444 466777777665444 3447
Q ss_pred HHHHHHhCCEEEE
Q 011959 273 RRITKENGALLIF 285 (474)
Q Consensus 273 ~~l~~~~g~llI~ 285 (474)
.-+|+.|++.+++
T Consensus 215 A~~Ak~~~vPv~V 227 (310)
T PRK08535 215 ALAAHEARVPFMV 227 (310)
T ss_pred HHHHHHhCCCEEE
Confidence 7789999998775
No 455
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=25.34 E-value=7.2e+02 Score=25.27 Aligned_cols=148 Identities=14% Similarity=0.207 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCC--HHHHHHHHHHHhhCCC--------CC-eEEEeCCHHHHHHHHHHHhHhhc---CCc
Q 011959 117 DDQVLAALGETMKKGTSFGAPC--LLENVLAEMVISAVPS--------IE-MVRFVNSGTEACMGVLRLARAFT---GRE 182 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~~~~~~--~~~~~la~~l~~~~~~--------~~-~v~~~~sGseA~~~al~~ar~~~---~~~ 182 (474)
.+.+.+.+.+.+..... .. .....+.+.|.+.++. .. -+++.++|+-=...+.++|..+. ++.
T Consensus 176 ~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~i~~vGptGvGKTTt~~kLA~~~~~~~~g~ 252 (424)
T PRK05703 176 SPEIAEKLLKLLLEHMP---PRERTAWRYLLELLANMIPVRVEDILKQGGVVALVGPTGVGKTTTLAKLAARYALLYGKK 252 (424)
T ss_pred CHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhCccccccccCCcEEEEECCCCCCHHHHHHHHHHHHHHhcCCC
Confidence 56677766666544211 11 2455666666665541 11 24456677776777777765443 445
Q ss_pred EEEEEeC-CCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCc
Q 011959 183 RIIKFEG-CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 261 (474)
Q Consensus 183 ~ii~~~~-~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~ 261 (474)
+|.+++- .|-.....-+...+. ..+++ +.. ..+.+++.+.+.+.. +.-.|+++.. |.
T Consensus 253 ~V~li~~D~~r~~a~eqL~~~a~---------~~~vp------~~~--~~~~~~l~~~l~~~~-~~DlVlIDt~----G~ 310 (424)
T PRK05703 253 KVALITLDTYRIGAVEQLKTYAK---------IMGIP------VEV--VYDPKELAKALEQLR-DCDVILIDTA----GR 310 (424)
T ss_pred eEEEEECCccHHHHHHHHHHHHH---------HhCCc------eEc--cCCHHhHHHHHHHhC-CCCEEEEeCC----CC
Confidence 5655532 332100000110010 01111 110 114556666665432 4567888864 23
Q ss_pred ccCCHHHHHHHHHHHHH----hCCEEEEeccc
Q 011959 262 IAPKPDFLNAIRRITKE----NGALLIFDEVM 289 (474)
Q Consensus 262 i~~~~~~l~~l~~l~~~----~g~llI~DEv~ 289 (474)
.......++++.++.+. ..++||++-..
T Consensus 311 ~~~d~~~~~~L~~ll~~~~~~~~~~LVl~a~~ 342 (424)
T PRK05703 311 SQRDKRLIEELKALIEFSGEPIDVYLVLSATT 342 (424)
T ss_pred CCCCHHHHHHHHHHHhccCCCCeEEEEEECCC
Confidence 33444446677777662 24567766544
No 456
>cd04917 ACT_AKiii-LysC-EC_2 ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in bacteria (Escherichia coli (EC) LysC). Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The E. coli AKIII (LysC) binds two feedback allosteric inhibitor lysine molecules at the dimer interface located between the ACT1 domain of two subunits. The second ACT domain (ACT2), this CD, is not involved in the binding of heterotrophic effectors. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.27 E-value=1.8e+02 Score=20.11 Aligned_cols=44 Identities=9% Similarity=0.069 Sum_probs=31.7
Q ss_pred HHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 428 ARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 428 ~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
.++...|.+.++.+...+.....+++...+++.++++.+|.+.+
T Consensus 19 ~~i~~~L~~i~i~~i~~~~s~~~is~~V~~~~~~~a~~~Lh~~f 62 (64)
T cd04917 19 KRIFDALEDINVRMICYGASNHNLCFLVKEEDKDEVVQRLHSRL 62 (64)
T ss_pred HHHHHHHHhCCeEEEEEecCccEEEEEEeHHHHHHHHHHHHHHH
Confidence 45666666667765444444567788889999999999987754
No 457
>PF04726 Microvir_J: Microvirus J protein; InterPro: IPR006815 This small protein is involved in DNA packaging, interacting with DNA via its hydrophobic C terminus. In bacteriophage phi-X174, J is present in 60 copies, and forms an S-shaped polypeptide chain without any secondary structure. It is thought to interact with DNA through simple charge interactions [].; GO: 0003677 DNA binding, 0019073 viral DNA genome packaging, 0019028 viral capsid; PDB: 1M06_J 1GFF_3 1RB8_J 2BPA_3.
Probab=24.87 E-value=30 Score=18.73 Aligned_cols=16 Identities=25% Similarity=0.854 Sum_probs=6.5
Q ss_pred EeeccCEEEEcCCCEE
Q 011959 86 DSVKGSHMWDIDGNEY 101 (474)
Q Consensus 86 ~~~~G~~~~d~dG~~~ 101 (474)
.+.+|+++|-+.|..|
T Consensus 9 ~~~kgarlwyvgg~qf 24 (24)
T PF04726_consen 9 GKRKGARLWYVGGTQF 24 (24)
T ss_dssp -SSSSS----SSS---
T ss_pred CccCceEEEEecceeC
Confidence 5778999998776543
No 458
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=24.83 E-value=2.1e+02 Score=22.29 Aligned_cols=48 Identities=25% Similarity=0.270 Sum_probs=29.2
Q ss_pred eEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 225 TLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 225 ~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
.+..+-+..+.+..++.. .++++|+.. ...|+ +.+.++|+++++.++.
T Consensus 43 lvIt~gdR~di~~~a~~~---~i~~iIltg------~~~~~----~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 43 LVITPGDREDIQLAAIEA---GIACIILTG------GLEPS----EEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEETT-HHHHHHHCCT---TECEEEEET------T--------HHHHHHHHHHT-EEEE
T ss_pred EEEEeCCcHHHHHHHHHh---CCCEEEEeC------CCCCC----HHHHHHHHHCCCEEEE
Confidence 455555566666666653 478888763 34553 4589999999998885
No 459
>cd04936 ACT_AKii-LysC-BS-like_2 ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis strain 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive AK isoenzymes. The B. subtilis strain 168 AKII is induced by methionine and repressed and inhibited by lysine. Although C. glutamicum is known to contain a single AK, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regu
Probab=24.80 E-value=1.5e+02 Score=19.95 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=31.4
Q ss_pred HHHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 427 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 427 ~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
..++...|.+.|+-+.-.......+++...+++.+.+++.|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~~v~~~d~~~~~~~l~~~~ 61 (63)
T cd04936 17 AAKMFEALAEAGINIEMISTSEIKISCLIDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCcEEEEEccCceEEEEEeHHHHHHHHHHHHHHh
Confidence 356778888888644332222356778888999999999888765
No 460
>COG1625 Fe-S oxidoreductase, related to NifB/MoaA family [Energy production and conversion]
Probab=24.26 E-value=2.4e+02 Score=28.26 Aligned_cols=55 Identities=27% Similarity=0.450 Sum_probs=34.4
Q ss_pred eEEcc-CCCHHHHHHHHhc----CCCCeEEEEEcccc----CCCCcccCCHHHHHHHHHHHHHh
Q 011959 225 TLTAP-FNDVSALENLFEN----NKGEIAAIILEPVV----GNSGFIAPKPDFLNAIRRITKEN 279 (474)
Q Consensus 225 ~~~~~-~~d~~~le~~l~~----~~~~~a~vi~ep~~----~~~G~i~~~~~~l~~l~~l~~~~ 279 (474)
++.+| +||.+.|++.+.. +...+.++.++|+- +..+.-.+.++-++.+.+++++.
T Consensus 181 iVl~PGvNdge~L~kT~~dL~~~g~~~~~~~~~~pvGlt~~n~~~i~~~t~~~l~~~k~i~re~ 244 (414)
T COG1625 181 IVLCPGVNDGEELEKTLEDLEEWGAHEVILMRVVPVGLTRYNRPGIRPPTPHELEEFKEIVREF 244 (414)
T ss_pred EEEcCCcCcHHHHHHHHHHHHHhCcCceeEEEeecceeeecCCCCCCCCCHHHHHHHHHHHHHH
Confidence 44444 6788888887753 33344444456642 33466667777788888887763
No 461
>COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
Probab=24.16 E-value=5.5e+02 Score=25.35 Aligned_cols=122 Identities=17% Similarity=0.089 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCCchhHHHhcCCCCccCCCCCCCCCCC
Q 011959 140 LENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK 219 (474)
Q Consensus 140 ~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~ 219 (474)
...+.-+.+.+.+|+.-++++=..+.-....|+++++++..-+ +..++...+......+........ .|...+
T Consensus 173 ~d~~~v~avRe~~g~~~~l~iDan~~~~~~~A~~~~~~l~~~~-l~~iEeP~~~~d~~~~~~l~~~~~---~PIa~g--- 245 (372)
T COG4948 173 EDLERVRALREAVGDDVRLMVDANGGWTLEEAIRLARALEEYG-LEWIEEPLPPDDLEGLRELRAATS---TPIAAG--- 245 (372)
T ss_pred HHHHHHHHHHHHhCCCceEEEeCCCCcCHHHHHHHHHHhcccC-cceEECCCCccCHHHHHHHHhcCC---CCEecC---
Confidence 4456666777777644466664444445557778777776655 777777766644333332211100 111111
Q ss_pred CCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 011959 220 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 284 (474)
Q Consensus 220 ~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI 284 (474)
. . .....+++++++.. ++=++.+-....|.+.. ..+|.++|+.+++.+.
T Consensus 246 ---E-s----~~~~~~~~~l~~~~----a~div~~d~~~~GGite----~~kia~~A~~~~~~v~ 294 (372)
T COG4948 246 ---E-S----VYTRWDFRRLLEAG----AVDIVQPDLARVGGITE----ALKIAALAEGFGVMVG 294 (372)
T ss_pred ---c-c----cccHHHHHHHHHcC----CCCeecCCccccCCHHH----HHHHHHHHHHhCCcee
Confidence 0 0 11577888888743 23333443344555666 8889999998887655
No 462
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.94 E-value=1.2e+02 Score=30.32 Aligned_cols=41 Identities=17% Similarity=0.390 Sum_probs=28.7
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 292 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (474)
+..++|+.- ++- |.+.+ .+.+.++|+++|+++++|-==..|
T Consensus 143 ~~~~vVLSD-Y~K-G~L~~----~q~~I~~ar~~~~pVLvDPKg~Df 183 (467)
T COG2870 143 SFDALVLSD-YAK-GVLTN----VQKMIDLAREAGIPVLVDPKGKDF 183 (467)
T ss_pred cCCEEEEec-ccc-ccchh----HHHHHHHHHHcCCcEEECCCCcch
Confidence 344555543 343 44555 889999999999999999655555
No 463
>cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway. D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=23.66 E-value=6.2e+02 Score=24.79 Aligned_cols=119 Identities=15% Similarity=0.108 Sum_probs=62.9
Q ss_pred HHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCCC-chhHHHhcCCCCccCCCCCCCCCCC
Q 011959 142 NVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH-ADPFLVKAGSGVATLGLPDSPGVPK 219 (474)
Q Consensus 142 ~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~-~~~~~~~~g~~~~~~~~~~~~g~~~ 219 (474)
.+..+.+.+.+++.-.+++ .|.+. ....|++.++.+.+ -.+..++...+.. ......+.... ..|...+
T Consensus 163 ~~~i~avr~~~g~~~~l~vDaN~~~-~~~~A~~~~~~l~~-~~i~~iEeP~~~~d~~~~~~L~~~~----~~pia~d--- 233 (352)
T cd03325 163 VERVAALREAVGPDIDIGVDFHGRV-SKPMAKDLAKELEP-YRLLFIEEPVLPENVEALAEIAART----TIPIATG--- 233 (352)
T ss_pred HHHHHHHHHhhCCCCEEEEECCCCC-CHHHHHHHHHhccc-cCCcEEECCCCccCHHHHHHHHHhC----CCCEEec---
Confidence 4555566666643234555 45444 46778888777754 3466666555433 22222221110 0111111
Q ss_pred CCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 220 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 220 ~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
+. ..+++++.++++.. ....+-+.+ .-.|.+.. ..++.++|+++|+.++.
T Consensus 234 ----Es----~~~~~~~~~~~~~~--~~d~v~~d~--~~~GGit~----~~~~~~lA~~~gi~~~~ 283 (352)
T cd03325 234 ----ER----LFSRWDFKELLEDG--AVDIIQPDI--SHAGGITE----LKKIAAMAEAYDVALAP 283 (352)
T ss_pred ----cc----ccCHHHHHHHHHhC--CCCEEecCc--cccCCHHH----HHHHHHHHHHcCCcEec
Confidence 00 11577888887642 233333343 33444555 78899999999987663
No 464
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=23.44 E-value=2.1e+02 Score=24.08 Aligned_cols=46 Identities=17% Similarity=0.251 Sum_probs=30.0
Q ss_pred HHHHHHhcCCCCeEEEEEcccc-CCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 011959 235 ALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFD 286 (474)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~-~~~G~i~~~~~~l~~l~~l~~~~g~llI~D 286 (474)
.+.+.+.+ +++.+||..|-. +..+. ..+ -..|++.|-+|++.++..
T Consensus 66 ~i~~~I~~--g~i~lVInt~dp~~~~~~---~~D-~~~IRR~Av~~~IP~~T~ 112 (142)
T PRK05234 66 QIGALIAE--GKIDMLIFFRDPLTAQPH---DPD-VKALLRLADVWNIPVATN 112 (142)
T ss_pred hHHHHHHc--CceeEEEEecCCCCCCcc---cch-HHHHHHHHHHcCCCEEcC
Confidence 35556664 378888886621 33221 222 568999999999998864
No 465
>cd07578 nitrilase_1_R1 First nitrilase domain of an uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). Members of this subgroup have two nitrilase domains. This is the first of those two domains. The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=23.38 E-value=1.2e+02 Score=28.07 Aligned_cols=53 Identities=15% Similarity=0.254 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccC------------CHHHHHHHHHHHHHhCCEEEE
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAP------------KPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~------------~~~~l~~l~~l~~~~g~llI~ 285 (474)
++.+.+++++....-+-+|+-|-...+|.... +..+++.|.++++++++.+|+
T Consensus 19 ~~~~~~~i~~A~~~gadlivfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~ii~ 83 (258)
T cd07578 19 IERLLALCEEAARAGARLIVTPEMATTGYCWYDRAEIAPFVEPIPGPTTARFAELAREHDCYIVV 83 (258)
T ss_pred HHHHHHHHHHHHhCCCCEEEcccccccCCCcCCHHHhhhhcccCCCHHHHHHHHHHHHcCcEEEE
Confidence 44444445432122245666666555554321 123588999999999998774
No 466
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=23.37 E-value=88 Score=25.17 Aligned_cols=27 Identities=15% Similarity=0.214 Sum_probs=21.5
Q ss_pred CCHHHHHHHHHHHHHhCC-EEEEecccc
Q 011959 264 PKPDFLNAIRRITKENGA-LLIFDEVMT 290 (474)
Q Consensus 264 ~~~~~l~~l~~l~~~~g~-llI~DEv~~ 290 (474)
...+.++.+.+..++++. +||+||++.
T Consensus 71 ~~~~l~~~~~~~l~~~~~~~lviDe~~~ 98 (131)
T PF13401_consen 71 TSDELRSLLIDALDRRRVVLLVIDEADH 98 (131)
T ss_dssp -HHHHHHHHHHHHHHCTEEEEEEETTHH
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeChHh
Confidence 345557888888888887 999999995
No 467
>cd07579 nitrilase_1_R2 Second nitrilase domain of an uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). Members of this subgroup have two nitrilase domains. This is the second of those two domains. The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=23.20 E-value=92 Score=29.53 Aligned_cols=53 Identities=17% Similarity=0.291 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCccc-------CCHHHHHHHHHHHHHhCCEEEE
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIA-------PKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~-------~~~~~l~~l~~l~~~~g~llI~ 285 (474)
++.+++++++...+-+-+|+-|-...+|... ....+++.|.++++++++.+|+
T Consensus 17 l~~~~~~i~~A~~~gadlvvfPE~~ltG~~~~~~~~~~~~~~~~~~l~~lA~~~~i~iv~ 76 (279)
T cd07579 17 LATIDRLAAEAKATGAELVVFPELALTGLDDPASEAESDTGPAVSALRRLARRLRLYLVA 76 (279)
T ss_pred HHHHHHHHHHHHHCCCCEEEeCCccccCCCChHHhcccCCCHHHHHHHHHHHHcCeEEEE
Confidence 5555555553211224455555544445321 1235689999999999998874
No 468
>PLN02446 (5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Probab=23.14 E-value=6.4e+02 Score=23.75 Aligned_cols=48 Identities=4% Similarity=0.012 Sum_probs=28.8
Q ss_pred CHHHH-HHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 232 DVSAL-ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 232 d~~~l-e~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
++.++ ++..+. ...-||+..+...|-..-+. ++-+.++++..++.+|.
T Consensus 164 ~~~e~~~~~~~~---g~~eii~TdI~rDGtl~G~d---~el~~~l~~~~~ipVIA 212 (262)
T PLN02446 164 AVDEETLEFLAA---YCDEFLVHGVDVEGKRLGID---EELVALLGEHSPIPVTY 212 (262)
T ss_pred CHHHHHHHHHHh---CCCEEEEEEEcCCCcccCCC---HHHHHHHHhhCCCCEEE
Confidence 45553 454443 36678887776544323333 66677777777887774
No 469
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=23.03 E-value=77 Score=26.05 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=20.1
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 235 ALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
.+++++.. ++.++|+.-.+ .+ -+.+.++|++|++.|+.
T Consensus 73 ~l~~l~~~---~~P~iIvt~~~------~~----p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 73 RLEKLFSY---NPPCIIVTRGL------EP----PPELIELAEKYNIPLLR 110 (127)
T ss_dssp HHHHHCTT---T-S-EEEETTT-------------HHHHHHHHHCT--EEE
T ss_pred HHHHHhCC---CCCEEEEECcC------CC----CHHHHHHHHHhCCcEEE
Confidence 35555553 56666665432 44 34588999999998774
No 470
>cd07567 biotinidase_like biotinidase and vanins (class 4 nitrilases). These secondary amidases participate in vitamin recycling. Biotinidase (EC 3.5.1.12) has both a hydrolase and a transferase activity. It hydrolyzes free biocytin or small biotinyl-peptides produced during the proteolytic degradation of biotin-dependent carboxylases, to release free biotin (vitamin H), and it can transfer biotin to acceptor molecules such as histones. Biotinidase deficiency in humans is an autosomal recessive disorder characterized by neurological and cutaneous symptoms. This subgroup includes the three human vanins, vanin1-3. Vanins are ectoenzymes, Vanin-1, and -2 are membrane associated, vanin-3 is secreted. They are pantotheinases (EC 3.5.1.92, pantetheine hydrolase), which convert pantetheine, to pantothenic acid (vitamin B5) and cysteamine (2-aminoethanethiol, a potent anti-oxidant). They are potential targets for therapeutic intervention in inflammatory disorders. Vanin-1 deficient mice lacking
Probab=23.02 E-value=1.2e+02 Score=29.22 Aligned_cols=19 Identities=16% Similarity=0.342 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHhCCEEEE
Q 011959 267 DFLNAIRRITKENGALLIF 285 (474)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~ 285 (474)
++++.|.++|+++++.+|+
T Consensus 88 ~~~~~l~~lAr~~~i~Iv~ 106 (299)
T cd07567 88 EVLQRLSCAARENSIYVVA 106 (299)
T ss_pred HHHHHHHHHHHHhCeEEEe
Confidence 5689999999999998884
No 471
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=22.98 E-value=37 Score=30.83 Aligned_cols=144 Identities=16% Similarity=0.138 Sum_probs=0.0
Q ss_pred ehhhhcCCCcceEEEEecHHHHHhhcCCCCccc----ccCCCCChHHHHH--HHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 011959 311 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ----AGTLSGNPLAMTA--GIHTLKRLKEPGTYEYLNKITGELTQGI 384 (474)
Q Consensus 311 t~sK~l~~G~~iG~~~~~~~i~~~~~~~~~~~~----~~t~~~~~~~~aa--a~aal~~~~~~~~~~~~~~~~~~l~~~L 384 (474)
|.++++.- +|-.+..+++++.+.+...++. +-|+++.-+.+.. ..+.++.+++.++.-.+..++-.-.+.+
T Consensus 7 C~~~a~~~---~g~~~t~eel~~~~~~~~~f~~~sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~ 83 (213)
T PRK10076 7 CPSGAFER---IGRDITLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKL 83 (213)
T ss_pred chhhHHHh---cCcccCHHHHHHHHHhhhHhhcCCCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHH
Q ss_pred HHHhhhcCCeeEEeeeceeEEEEEecCCCcCcccccccchHHHHHHHHHHHHCCeEecccCCcceEEecCCcHHHHHHHH
Q 011959 385 IDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTI 464 (474)
Q Consensus 385 ~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~t~e~i~~~l 464 (474)
.++....... .++++.-+...+....-.+.+...+-.+.+.+.|+.+.-.. .+...+..++|+++++.
T Consensus 84 ~~l~~~~D~~----------l~DiK~~d~~~~~~~tG~~~~~il~nl~~l~~~g~~v~iR~--~vIPg~nd~~e~i~~ia 151 (213)
T PRK10076 84 LPLAKLCDEV----------LFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRL--PLIPGFTLSRENMQQAL 151 (213)
T ss_pred HHHHHhcCEE----------EEeeccCCHHHHHHHHCCCHHHHHHHHHHHHhCCCcEEEEE--EEECCCCCCHHHHHHHH
Q ss_pred HHHHH
Q 011959 465 TAAEK 469 (474)
Q Consensus 465 ~~l~~ 469 (474)
+.+.+
T Consensus 152 ~~l~~ 156 (213)
T PRK10076 152 DVLIP 156 (213)
T ss_pred HHHHH
No 472
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=22.87 E-value=5.7e+02 Score=23.13 Aligned_cols=62 Identities=23% Similarity=0.266 Sum_probs=41.8
Q ss_pred CeEE-EEEcccc-CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccCCCccccccCCCC--ceeehhhhcC
Q 011959 246 EIAA-IILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTP--DLTTLGKIIG 317 (474)
Q Consensus 246 ~~a~-vi~ep~~-~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~p--di~t~sK~l~ 317 (474)
+++. +-+-|+. ..+|...-.-.+++++.+|++||++++++= .++.+++++.. |++.|+..+|
T Consensus 130 ~VAIe~~L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VIS----------S~A~s~~~lRsPRdl~aL~~~iG 195 (216)
T PRK03892 130 GVAIGFSLSPLLRANPYERANILRFMMKAWQLVNKYKVPRFIT----------SSAESKWEVRGPRDLMSLGINIG 195 (216)
T ss_pred CeEEEEecHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEEe----------cCcchhccCCCHHHHHHHHHHhC
Confidence 4554 4445644 456666666667999999999999998762 23456677642 6777777765
No 473
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=22.63 E-value=6.7e+02 Score=23.80 Aligned_cols=116 Identities=13% Similarity=0.053 Sum_probs=58.1
Q ss_pred HHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEe--CCCCCCchhHHHhcCCCCccCCCCCCCCCCC
Q 011959 142 NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE--GCYHGHADPFLVKAGSGVATLGLPDSPGVPK 219 (474)
Q Consensus 142 ~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~--~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~ 219 (474)
.++++.-.++.++. .+++|.+-|..+...|+.|....++-+|++.+ |.+.|... +..+... |++
T Consensus 97 ~~I~~~a~~~I~~g-~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l-a~eL~~~-----------GI~- 162 (275)
T PRK08335 97 REIGNIGSELIDDG-DVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL-ANELEFL-----------GIE- 162 (275)
T ss_pred HHHHHHHHHHcCCC-CEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH-HHHHHHC-----------CCC-
Confidence 45555555555443 35666555556677776553333344666665 23444333 2222221 221
Q ss_pred CCCCceEEccCCCHHHHHHHHhcCCCCeEEEE--EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 220 GATYETLTAPFNDVSALENLFENNKGEIAAII--LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 220 ~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi--~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
+..++-+.. -.++++ +-.|+ .+.+..||+.+..-- --.+.-+|+.||+.+++
T Consensus 163 -----vtlI~Dsa~---~~~m~~----vd~VivGAD~I~~nG~v~NKiG--T~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 163 -----FEVITDAQL---GLFAKE----ATLALVGADNVTRDGYVVNKAG--TYLLALACHDNGVPFYV 216 (275)
T ss_pred -----EEEEeccHH---HHHHHh----CCEEEECccEEecCCCEeehhh--HHHHHHHHHHcCCCEEE
Confidence 222221112 223432 33444 466777776655433 33467789999998774
No 474
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=22.52 E-value=2e+02 Score=20.05 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=32.8
Q ss_pred HHHHHHHHHHCCeEec--ccCCcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 427 FARFYRGMLEEGVYFA--PSQFEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 427 ~~~~~~~l~~~Gv~v~--~~~~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
..++...|.+.||-+. ..+.....+++...+++.+.++..|.+.+
T Consensus 17 ~~~i~~aL~~~~I~v~~i~~g~s~~sis~~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 17 LERAFHVLYTKGVNVQMISQGASKVNISLIVNDSEAEGCVQALHKSF 63 (65)
T ss_pred HHHHHHHHHHCCCCEEEEEecCccceEEEEEeHHHHHHHHHHHHHHH
Confidence 4577888888887552 22223457778889999999999988765
No 475
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=22.50 E-value=2.1e+02 Score=19.60 Aligned_cols=46 Identities=15% Similarity=0.165 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHCCeEeccc--CCcceEEecCCcHHHHHHHHHHHHHHH
Q 011959 426 KFARFYRGMLEEGVYFAPS--QFEAGFTSLAHSSDDIQHTITAAEKVL 471 (474)
Q Consensus 426 ~~~~~~~~l~~~Gv~v~~~--~~~~~~~~~~~t~e~i~~~l~~l~~~~ 471 (474)
...++.+.|.+.||-+.-. +.....+++...+++.++++++|.+.+
T Consensus 17 ~~~~i~~~l~~~~I~v~~i~~~~s~~~is~~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 17 VAATFFSALAKANVNIRAIAQGSSERNISAVIDEDDATKALRAVHERF 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCcccEEEEEEeHHHHHHHHHHHHHHH
Confidence 3467888888998754211 112367788888999999999988765
No 476
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=22.41 E-value=1.4e+02 Score=31.02 Aligned_cols=47 Identities=17% Similarity=0.126 Sum_probs=31.9
Q ss_pred CeEEEEEccccCCCCcccCCHHH-HHHHHHHHHHhCCEEEEeccccCc
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDF-LNAIRRITKENGALLIFDEVMTGF 292 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~-l~~l~~l~~~~g~llI~DEv~~g~ 292 (474)
.+..||.+..-..+|++.+...+ -.+..++|+.++++|++=.=..||
T Consensus 324 ~pVGiIANqp~~~~G~l~~~sa~KaArFI~~cd~~~iPlv~L~d~pGF 371 (526)
T COG4799 324 RPVGIIANQPRHLGGVLDIDSADKAARFIRLCDAFNIPLVFLVDTPGF 371 (526)
T ss_pred EEEEEEecCccccccccchHHHHHHHHHHHhhhccCCCeEEEeCCCCC
Confidence 45567776655667887765431 334568999999988865546677
No 477
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=22.39 E-value=1.7e+02 Score=23.75 Aligned_cols=47 Identities=19% Similarity=0.165 Sum_probs=28.3
Q ss_pred CHHHHHHHHhc-CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 232 DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 232 d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
+.+.+.+.+++ .....+++++....... -.| +++.++|++++++||.
T Consensus 57 ~~~~~~~~i~~L~~~~~agL~i~~~~~~~--~iP-----~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 57 DEEELREFIRELAEKGAAGLGIKTGRYLD--EIP-----EEIIELADELGLPLIE 104 (123)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeccCccc--cCC-----HHHHHHHHHcCCCEEE
Confidence 44555555543 12357788876542211 122 4589999999998884
No 478
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.71 E-value=5.2e+02 Score=22.22 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHh-CCEEE
Q 011959 267 DFLNAIRRITKEN-GALLI 284 (474)
Q Consensus 267 ~~l~~l~~l~~~~-g~llI 284 (474)
.+-+.++++|.++ ++.+|
T Consensus 137 ~~n~~~~~~a~~~~~~~~i 155 (191)
T cd01836 137 LLNRALERLASEAPRVTLL 155 (191)
T ss_pred HHHHHHHHHHhcCCCeEEE
Confidence 4556778899998 77655
No 479
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=21.61 E-value=1.2e+02 Score=22.55 Aligned_cols=48 Identities=10% Similarity=0.108 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCC
Q 011959 141 ENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 191 (474)
Q Consensus 141 ~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (474)
+.+|.+.+.+.| |.+.-+.|+|..+-....|- .-+.+++|++-.+++|
T Consensus 20 ~~~L~~~i~~~F-G~~arFhTCSa~~m~a~~Li--~FL~~kgKfi~~~~gf 67 (77)
T TIGR03853 20 RESLKAAIEQKF-GEDARFHTCSAEGMTADELL--QFLLKKGKFIESDGGF 67 (77)
T ss_pred HHHHHHHHHHHh-CCCceEeecccccCCHHHHH--HHHHHCCCEeecCCcE
Confidence 467888888888 55566667765543222222 1455788888876665
No 480
>TIGR02236 recomb_radA DNA repair and recombination protein RadA. This family consists exclusively of archaeal RadA protein, a homolog of bacterial RecA (TIGR02012), eukaryotic RAD51 (TIGR02239), and archaeal RadB (TIGR02237). This protein is involved in DNA repair and recombination. The member from Pyrococcus horikoshii contains an intein.
Probab=21.53 E-value=1.7e+02 Score=28.07 Aligned_cols=58 Identities=16% Similarity=0.233 Sum_probs=33.6
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccC-----------CHHHHHHHHHHHHHhCCEEE-Eecccc
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAP-----------KPDFLNAIRRITKENGALLI-FDEVMT 290 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~-----------~~~~l~~l~~l~~~~g~llI-~DEv~~ 290 (474)
++.+.+.+.+...+.+.||++++...--.-.. -..++..|..++++|++.+| ..++.+
T Consensus 179 ld~l~~~i~~~~~~~~lVVIDSisa~~r~e~~~~~~~~~r~~~l~~~~~~L~~~a~~~~~~v~~tnqv~~ 248 (310)
T TIGR02236 179 VEKAEDLIKELNNPVKLLIVDSLTSHFRAEYVGRGALAERQQKLNKHLHDLLRLADLYNAAVVVTNQVMA 248 (310)
T ss_pred HHHHHHHHHhcCCCceEEEEecchHhhhHhhcCchhHHHHHHHHHHHHHHHHHHHHHhCcEEEEeceeee
Confidence 34556666654335788999876543110000 01234668889999998654 555554
No 481
>cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid. MR is the first enzyme in the bacterial pathway that converts mandelic acid to benzoic acid and allows this pathway to utilize either enantiomer of mandelate. MR belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=21.53 E-value=7.7e+02 Score=24.14 Aligned_cols=143 Identities=10% Similarity=0.021 Sum_probs=71.2
Q ss_pred CHHHHHHHHHHHHhcCC-----CCCC-CHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEEeC
Q 011959 117 DDQVLAALGETMKKGTS-----FGAP-CLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEG 189 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~-----~~~~-~~~~~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~ 189 (474)
.+++.+.+.+..++|.. .+.. .+...+..+.+.+.+++.-.+++ .|.+. ..+.|++.++.+.+- .+..++.
T Consensus 142 ~~~~~~~a~~~~~~Gf~~~KiKvg~~~~~~d~~~v~air~~~g~~~~l~vDaN~~~-~~~~A~~~~~~l~~~-~i~~iEe 219 (355)
T cd03321 142 AKLATERAVTAAEEGFHAVKTKIGYPTADEDLAVVRSIRQAVGDGVGLMVDYNQSL-TVPEAIERGQALDQE-GLTWIEE 219 (355)
T ss_pred HHHHHHHHHHHHHhhhHHHhhhcCCCChHhHHHHHHHHHHhhCCCCEEEEeCCCCc-CHHHHHHHHHHHHcC-CCCEEEC
Confidence 34555556655555411 1221 22334566666666643224444 35444 356688877777543 4555555
Q ss_pred CCC-CCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHH
Q 011959 190 CYH-GHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 268 (474)
Q Consensus 190 ~yh-g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~ 268 (474)
... ........+..... .|...+ + ...+..+++++++.. ....+.+.+ ...|.+..
T Consensus 220 P~~~~d~~~~~~l~~~~~----ipia~~-------E----~~~~~~~~~~~i~~~--~~d~i~~~~--~~~GGit~---- 276 (355)
T cd03321 220 PTLQHDYEGHARIASALR----TPVQMG-------E----NWLGPEEMFKALSAG--ACDLVMPDL--MKIGGVTG---- 276 (355)
T ss_pred CCCCcCHHHHHHHHHhcC----CCEEEc-------C----CCcCHHHHHHHHHhC--CCCeEecCH--hhhCCHHH----
Confidence 443 32222222221100 011000 0 012678888888743 233444444 33344555
Q ss_pred HHHHHHHHHHhCCEEE
Q 011959 269 LNAIRRITKENGALLI 284 (474)
Q Consensus 269 l~~l~~l~~~~g~llI 284 (474)
..++.++|+++|+-++
T Consensus 277 ~~~ia~~A~~~gi~~~ 292 (355)
T cd03321 277 WLRASALAEQAGIPMS 292 (355)
T ss_pred HHHHHHHHHHcCCeec
Confidence 7789999999998753
No 482
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=21.49 E-value=52 Score=27.28 Aligned_cols=58 Identities=19% Similarity=0.352 Sum_probs=33.0
Q ss_pred CCCHHHHHHHHhcCCCCeEEEEEccccCC----CCc-ccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011959 230 FNDVSALENLFENNKGEIAAIILEPVVGN----SGF-IAPKPDFLNAIRRITKENGALLIFDEVM 289 (474)
Q Consensus 230 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~----~G~-i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (474)
++|++.+-+.+++. +--..+|+-|+++. +|. ..--.+|.++|..+|+++|+ =|.|=..
T Consensus 35 y~Dl~l~L~~~k~~-g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf-~v~D~s~ 97 (130)
T PF04914_consen 35 YDDLQLLLDVCKEL-GIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGF-NVADFSD 97 (130)
T ss_dssp HHHHHHHHHHHHHT-T-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT---EEE-TT
T ss_pred HHHHHHHHHHHHHc-CCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEeccc
Confidence 44677777777765 24467777888762 442 22335678899999999999 6777443
No 483
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=21.44 E-value=3.3e+02 Score=27.59 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=42.1
Q ss_pred CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCC--EEEEeccccCcccCCCcccccc--CCCCceeehhhhc--
Q 011959 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA--LLIFDEVMTGFRLAYGGAQEYF--GVTPDLTTLGKII-- 316 (474)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~--llI~DEv~~g~r~g~~~~~~~~--g~~pdi~t~sK~l-- 316 (474)
...+++.+.+.|-+.. +.. ++.+..-..+++. ++++||+|+ .+.| ++.||.++++--=
T Consensus 110 ekp~~K~LYITPE~AA------t~~-FQ~lLn~L~~r~~L~Y~vVDEAHC---------VSQWGHDFRPDYL~LG~LRS~ 173 (641)
T KOG0352|consen 110 EKPTIKMLYITPEGAA------TDG-FQKLLNGLANRDVLRYIVVDEAHC---------VSQWGHDFRPDYLTLGSLRSV 173 (641)
T ss_pred cCCceeEEEEchhhhh------hhh-HHHHHHHHhhhceeeeEEechhhh---------HhhhccccCcchhhhhhHHhh
Confidence 3457888888886543 233 4444443344444 589999996 1222 4579988876322
Q ss_pred CCCcceEEE--EecHHHHH
Q 011959 317 GGGLPVGAY--GGRRDIME 333 (474)
Q Consensus 317 ~~G~~iG~~--~~~~~i~~ 333 (474)
-+|.|-=++ .+++++.+
T Consensus 174 ~~~vpwvALTATA~~~VqE 192 (641)
T KOG0352|consen 174 CPGVPWVALTATANAKVQE 192 (641)
T ss_pred CCCCceEEeecccChhHHH
Confidence 245443333 23444444
No 484
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.38 E-value=2e+02 Score=24.66 Aligned_cols=39 Identities=18% Similarity=0.365 Sum_probs=22.9
Q ss_pred CeEEEEEccccCCCCcc---------cCCHHHHHHHHHHHHHhCCEEE
Q 011959 246 EIAAIILEPVVGNSGFI---------APKPDFLNAIRRITKENGALLI 284 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i---------~~~~~~l~~l~~l~~~~g~llI 284 (474)
....|++.|........ ..-..|-+.++++|+++++.+|
T Consensus 104 ~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 151 (191)
T cd01834 104 APRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFV 151 (191)
T ss_pred CCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 45667777654332211 1123445667888999997766
No 485
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=21.36 E-value=2.9e+02 Score=25.19 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=28.2
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
..+++|+|=+. ..|.... ++++.+++++||+.+|.
T Consensus 168 ~p~~vicEil~-~dG~ma~----~~~l~~fA~~h~l~~is 202 (218)
T PRK00910 168 QPAGVLCELTN-PDGTMAK----TPEIIAFGKLHNMPVLT 202 (218)
T ss_pred CceEEEEEEec-CCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 35888888765 4577777 88899999999999873
No 486
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=21.28 E-value=8.8e+02 Score=24.67 Aligned_cols=152 Identities=12% Similarity=0.107 Sum_probs=77.3
Q ss_pred CHHHHHHHHHHHHhcCCC-C--CCCHHHHHHHHHHHhhCCC-------CCe-EEEeCCHHHHHHHHHHHhHhhcCC-cEE
Q 011959 117 DDQVLAALGETMKKGTSF-G--APCLLENVLAEMVISAVPS-------IEM-VRFVNSGTEACMGVLRLARAFTGR-ERI 184 (474)
Q Consensus 117 ~p~v~~a~~~~~~~~~~~-~--~~~~~~~~la~~l~~~~~~-------~~~-v~~~~sGseA~~~al~~ar~~~~~-~~i 184 (474)
.+.+++.+.+.+...... . ........+.+.+...++. ... .++.++|+-=...+.++|..+.++ .+|
T Consensus 193 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~vI~LVGptGvGKTTTiaKLA~~L~~~GkkV 272 (436)
T PRK11889 193 EQYFIHAYAEKLKVKFENATMITEEEVIEYILEDMRSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTV 272 (436)
T ss_pred CHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHHHhccccccccCCcEEEEECCCCCcHHHHHHHHHHHHHHcCCcE
Confidence 677777777776542111 1 1224455566666554431 112 456677777677777776555432 234
Q ss_pred EEE-eCCCCCCchhHHHhcCCCCccCCCCCCCCCCCCCCCceEEccCCCHHHHHHHHhcCCC--CeEEEEEccccCCCCc
Q 011959 185 IKF-EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG--EIAAIILEPVVGNSGF 261 (474)
Q Consensus 185 i~~-~~~yhg~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~--~~a~vi~ep~~~~~G~ 261 (474)
.+. ...|......-+...+. ..+++ ++. ..+.+++.+.+..... +.-.|+++.. |.
T Consensus 273 glI~aDt~RiaAvEQLk~yae---------~lgip------v~v--~~d~~~L~~aL~~lk~~~~~DvVLIDTa----GR 331 (436)
T PRK11889 273 GFITTDHSRIGTVQQLQDYVK---------TIGFE------VIA--VRDEAAMTRALTYFKEEARVDYILIDTA----GK 331 (436)
T ss_pred EEEecCCcchHHHHHHHHHhh---------hcCCc------EEe--cCCHHHHHHHHHHHHhccCCCEEEEeCc----cc
Confidence 333 22443111111111100 11221 111 1267777777653321 3567888864 33
Q ss_pred ccCCHHHHHHHHHHHHH---hCCEEEEeccc
Q 011959 262 IAPKPDFLNAIRRITKE---NGALLIFDEVM 289 (474)
Q Consensus 262 i~~~~~~l~~l~~l~~~---~g~llI~DEv~ 289 (474)
.....+.++++.++.++ +.++|++|...
T Consensus 332 s~kd~~lm~EL~~~lk~~~PdevlLVLsATt 362 (436)
T PRK11889 332 NYRASETVEEMIETMGQVEPDYICLTLSASM 362 (436)
T ss_pred cCcCHHHHHHHHHHHhhcCCCeEEEEECCcc
Confidence 44455668888887765 45778887654
No 487
>COG3155 ElbB Uncharacterized protein involved in an early stage of isoprenoid biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.20 E-value=62 Score=27.63 Aligned_cols=34 Identities=24% Similarity=0.400 Sum_probs=29.0
Q ss_pred cCCCCceeehhhhcC-CCcceEEEEecHHHHHhhc
Q 011959 303 FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVA 336 (474)
Q Consensus 303 ~g~~pdi~t~sK~l~-~G~~iG~~~~~~~i~~~~~ 336 (474)
..+.||+..+.|+|. +|-|+|+++..+.++-.+.
T Consensus 111 C~v~pDv~al~~a~~~agKP~G~iCIaP~m~pki~ 145 (217)
T COG3155 111 CSVDPDLKALAQAMHQAGKPLGFMCIAPAMLPKIF 145 (217)
T ss_pred ceeCHHHHHHHHHHHHhCCCceEEEecHHHHHHHc
Confidence 457899999999999 8999999988888776664
No 488
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=21.16 E-value=2.5e+02 Score=25.81 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=29.8
Q ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEE-Eeccc
Q 011959 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI-FDEVM 289 (474)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI-~DEv~ 289 (474)
...++|+|=.. ..|.... ++++.+++++||+.+| .+|+.
T Consensus 172 ~P~~vicEil~-~dG~ma~----~~~l~~fA~~~~l~iisi~dli 211 (230)
T PRK00014 172 RPAGVLCELMN-ADGTMMR----GASLERYAAKEGLVALAIDELA 211 (230)
T ss_pred CceEEEEEEeC-CCCCccC----HHHHHHHHHHcCCcEEEHHHHH
Confidence 35888888754 4577777 8889999999999987 44443
No 489
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=21.14 E-value=2.2e+02 Score=24.60 Aligned_cols=63 Identities=19% Similarity=0.196 Sum_probs=40.2
Q ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc--ccCCCccccccCCCCcee-ehh
Q 011959 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF--RLAYGGAQEYFGVTPDLT-TLG 313 (474)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~--r~g~~~~~~~~g~~pdi~-t~s 313 (474)
..-+|++.+.+.+-. .+..+.+.++.+.+.+++.++|.=++=+|+ .+|... ..-+.+|.+ ||+
T Consensus 99 ~~dlIIDal~G~G~~-~~l~~~~~~~i~~iN~~~~~viAiDiPSGl~~dtG~~~---~~~v~Ad~Tvt~g 164 (169)
T PF03853_consen 99 PADLIIDALFGTGFS-GPLRGPIAELIDWINASRAPVIAIDIPSGLDADTGEVD---GPAVRADYTVTFG 164 (169)
T ss_dssp CESEEEEES-STTGG-SCGSTCHHHHHHHHHHHCSEEEEESS-TTCBTTTB-BS---SSS---SEEEEES
T ss_pred cccEEEEecccCCCC-CCcCHHHHHHHHHHhccCCcEEEecCCCCccCCCCCcC---CCEEEcceeeecC
Confidence 367999999998533 333344999999999999999999999998 333321 223667754 554
No 490
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=20.88 E-value=35 Score=29.17 Aligned_cols=30 Identities=27% Similarity=0.253 Sum_probs=18.8
Q ss_pred HHHHHHHHhcCCCCeEEEEEccccCCCCcccC
Q 011959 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAP 264 (474)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~ 264 (474)
.+.|+...+ .+++++|+++-+-+-+..-.+
T Consensus 62 ~~~l~~~~~--Dp~v~vIlvd~~~G~g~~~~~ 91 (153)
T PF00549_consen 62 NEALEIEAA--DPEVKVILVDIVGGIGSCEDP 91 (153)
T ss_dssp HHHHHHHHT--STTESEEEEEEESSSSSHHHH
T ss_pred HHHHHHHhc--CCCccEEEEEeccccCchHHH
Confidence 445555444 358999999988765544444
No 491
>TIGR00140 hupD hydrogenase expression/formation protein. C at 64 and 67 are believed to be metal binding. Postulated to be involved in processing or hydrogenase. Superfamily suggests that it is a peptidase/protease.
Probab=20.87 E-value=4.7e+02 Score=21.35 Aligned_cols=47 Identities=17% Similarity=0.231 Sum_probs=32.5
Q ss_pred HHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCC
Q 011959 143 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 193 (474)
Q Consensus 143 ~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg 193 (474)
.++++|.+.++.++.|.+..+|+...+.+-.+ .+.+.+|+.|-..-|
T Consensus 2 ~v~~~L~~~~~~~~~v~vid~gt~~~~l~~~l----~~~d~viiVDA~~~g 48 (134)
T TIGR00140 2 RLVEALQQRYAFPDNVTLLDGGTQGLYLLPLI----ESADRLIILDAVDYG 48 (134)
T ss_pred HHHHHHHHhCCCCCCeEEEecCccHHHHHHHH----hcCCeEEEEecccCC
Confidence 46677777764445677788888887776653 366888888876544
No 492
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=20.82 E-value=1.7e+02 Score=22.56 Aligned_cols=41 Identities=17% Similarity=0.369 Sum_probs=26.9
Q ss_pred HHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 234 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 234 ~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
..++..+.+- +...++++.+.... ...+.+.|+++|++++.
T Consensus 40 ~~l~~~i~~a--D~VIv~t~~vsH~~---------~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 40 SRLPSKIKKA--DLVIVFTDYVSHNA---------MWKVKKAAKKYGIPIIY 80 (97)
T ss_pred hHHHHhcCCC--CEEEEEeCCcChHH---------HHHHHHHHHHcCCcEEE
Confidence 3466666532 44445555544322 77899999999998875
No 493
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=20.69 E-value=6e+02 Score=22.53 Aligned_cols=37 Identities=8% Similarity=0.214 Sum_probs=22.5
Q ss_pred eEEEeC--CHHHHHHHHHHHhHhhc--CCcEEEEEeCCCCC
Q 011959 157 MVRFVN--SGTEACMGVLRLARAFT--GRERIIKFEGCYHG 193 (474)
Q Consensus 157 ~v~~~~--sGseA~~~al~~ar~~~--~~~~ii~~~~~yhg 193 (474)
.+.+++ +|.-.-..+..+|.++. .+.+|+..|-..++
T Consensus 37 vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D~~~ 77 (207)
T TIGR03018 37 LIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDADLRR 77 (207)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 455554 55555555666666553 36788888776554
No 494
>PRK14017 galactonate dehydratase; Provisional
Probab=20.66 E-value=6.6e+02 Score=24.95 Aligned_cols=119 Identities=15% Similarity=0.068 Sum_probs=59.9
Q ss_pred HHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCC-CchhHHHhcCCCCccCCCCCCCCCCC
Q 011959 142 NVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHG-HADPFLVKAGSGVATLGLPDSPGVPK 219 (474)
Q Consensus 142 ~~la~~l~~~~~~~~~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg-~~~~~~~~~g~~~~~~~~~~~~g~~~ 219 (474)
.+..+.+.+.+++.-.+.+ .|.+. ....|++.++.+.. -.+..++..... .......+..... .|...+
T Consensus 164 ~~~i~avr~~~g~~~~l~vDaN~~w-~~~~A~~~~~~l~~-~~~~~iEeP~~~~d~~~~~~L~~~~~----~pIa~d--- 234 (382)
T PRK14017 164 VARVAAVREAVGPEIGIGVDFHGRV-HKPMAKVLAKELEP-YRPMFIEEPVLPENAEALPEIAAQTS----IPIATG--- 234 (382)
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCC-CHHHHHHHHHhhcc-cCCCeEECCCCcCCHHHHHHHHhcCC----CCEEeC---
Confidence 3444555555642223444 45433 34567777766644 345555555433 2222222221100 111111
Q ss_pred CCCCceEEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011959 220 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (474)
Q Consensus 220 ~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (474)
+. ..++.+++++++.. -+..+-+.+ +..|.+.. ..++.++|+++|+.++.
T Consensus 235 ----Es----~~~~~~~~~li~~~--a~d~v~~d~--~~~GGit~----~~~ia~~A~~~gi~~~~ 284 (382)
T PRK14017 235 ----ER----LFSRWDFKRVLEAG--GVDIIQPDL--SHAGGITE----CRKIAAMAEAYDVALAP 284 (382)
T ss_pred ----Cc----cCCHHHHHHHHHcC--CCCeEecCc--cccCCHHH----HHHHHHHHHHcCCeEee
Confidence 00 11678888888753 233333333 33455555 78899999999987664
No 495
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=20.55 E-value=7.1e+02 Score=23.47 Aligned_cols=52 Identities=21% Similarity=0.114 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhh--cCCcEEEEEeCCCCC
Q 011959 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--TGRERIIKFEGCYHG 193 (474)
Q Consensus 138 ~~~~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~--~~~~~ii~~~~~yhg 193 (474)
.+-+.++.+...+.. + +|++. .|+....-++++++.. .|-+.+++..|.|+.
T Consensus 51 ~eEr~~l~~~~~~~~-~--~vi~g-vg~~~~~~ai~~a~~a~~~Gad~v~v~~P~y~~ 104 (279)
T cd00953 51 FQEKLELLKAYSDIT-D--KVIFQ-VGSLNLEESIELARAAKSFGIYAIASLPPYYFP 104 (279)
T ss_pred HHHHHHHHHHHHHHc-C--CEEEE-eCcCCHHHHHHHHHHHHHcCCCEEEEeCCcCCC
Confidence 455667777776654 2 35444 4556677777777655 355777777666644
No 496
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....
Probab=20.48 E-value=4.3e+02 Score=20.76 Aligned_cols=47 Identities=13% Similarity=0.323 Sum_probs=29.4
Q ss_pred EEccCCCHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 011959 226 LTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 284 (474)
Q Consensus 226 ~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI 284 (474)
+.+...|.+.+.+..+++ ++-.+++-|-. -....|.+..++.|+.++
T Consensus 44 ~~~~~~d~~~l~~~a~~~--~idlvvvGPE~----------pL~~Gl~D~l~~~gi~vf 90 (100)
T PF02844_consen 44 VPIDITDPEELADFAKEN--KIDLVVVGPEA----------PLVAGLADALRAAGIPVF 90 (100)
T ss_dssp E-S-TT-HHHHHHHHHHT--TESEEEESSHH----------HHHTTHHHHHHHTT-CEE
T ss_pred cCCCCCCHHHHHHHHHHc--CCCEEEECChH----------HHHHHHHHHHHHCCCcEE
Confidence 333455888888877765 67788876532 225568888888887654
No 497
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=20.28 E-value=2.1e+02 Score=21.39 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=25.2
Q ss_pred CCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCCCC
Q 011959 154 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 193 (474)
Q Consensus 154 ~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg 193 (474)
+..-++++.+|..+...+..+. ..|-+++..+++++.+
T Consensus 56 ~~~ivv~c~~g~~s~~a~~~l~--~~G~~~v~~l~gG~~~ 93 (96)
T cd01444 56 DRPVVVYCYHGNSSAQLAQALR--EAGFTDVRSLAGGFEA 93 (96)
T ss_pred CCCEEEEeCCCChHHHHHHHHH--HcCCceEEEcCCCHHH
Confidence 3455777888888877776653 3355667777776644
No 498
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=20.15 E-value=1.2e+02 Score=22.60 Aligned_cols=48 Identities=13% Similarity=0.109 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHhHhhcCCcEEEEEeCCC
Q 011959 141 ENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 191 (474)
Q Consensus 141 ~~~la~~l~~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (474)
..+|.+.+.+.| |.+.-+.|+|+.+-....|- .-+..|+|++..+++|
T Consensus 22 ~~~L~~ai~~~F-G~~arFhTCSae~m~a~eLv--~FL~~rgKfi~~~~g~ 69 (78)
T PF10678_consen 22 KEELKAAIIEKF-GEDARFHTCSAEGMTADELV--DFLEERGKFIPSDDGF 69 (78)
T ss_pred HHHHHHHHHHHh-CCCceEEecCCCCCCHHHHH--HHHHHcCCEeecCCCE
Confidence 467888888888 55555567665542222221 1456788888876655
Done!