RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 011959
(474 letters)
>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase.
Length = 474
Score = 922 bits (2385), Expect = 0.0
Identities = 386/477 (80%), Positives = 424/477 (88%), Gaps = 6/477 (1%)
Query: 1 MAATITGVGVGLGLSCSSKLTNRFSSS---AGSSRCSVKMSVSVEEQRKNFTLKKSEEAF 57
MAA + G +GL SCS+K + R SSS +KM+VSVEE+ K FT KSEE F
Sbjct: 1 MAAALAGSALGL--SCSAKPSARRSSSQRRRAVRSSVIKMAVSVEEK-KKFTTTKSEEIF 57
Query: 58 NVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHAD 117
AKELMPGGVNSPVRAFKSVGGQPIVFD VKGS+ WD+DGNEYIDYVGSWGPAIIGHAD
Sbjct: 58 KAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHAD 117
Query: 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA 177
D+VLAAL ETMKKGTSFGAPCLLENVLAEMVI AVPS+EMVRFVNSGTEACMGVLRLARA
Sbjct: 118 DEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARA 177
Query: 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 237
+TGRE+IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK AT TLTAP+ND+ A++
Sbjct: 178 YTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVK 237
Query: 238 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 297
LFE NKGEIAA+ILEPVVGNSGFI PK +FL +R ITKENGALL+FDEVMTGFR+AYG
Sbjct: 238 KLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYG 297
Query: 298 GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAG 357
GAQEYFG+TPDLTTLGK+IGGGLPVGAYGGRR+IMEMVAPAGPMYQAGTLSGNPLAMTAG
Sbjct: 298 GAQEYFGITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAG 357
Query: 358 IHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 417
IHTLKRL++PGTYEYL+KIT +L QGI++AGKKAGH +CGGYISGMFGFFFTEGPVYNF
Sbjct: 358 IHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFA 417
Query: 418 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 474
DAKKS+T KFARF+RGMLEEGVY APSQFEAGFTSLAH+ +DI TI AAE+VL +I
Sbjct: 418 DAKKSDTAKFARFHRGMLEEGVYLAPSQFEAGFTSLAHTEEDIDFTIAAAERVLARI 474
>gnl|CDD|234607 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 426
Score = 796 bits (2058), Expect = 0.0
Identities = 277/425 (65%), Positives = 330/425 (77%)
Query: 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWG 109
+ KSEE F AK+L+PGGVNSPVRAFKSVGG P + KG++++D+DGNEYIDYVGSWG
Sbjct: 1 MSKSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWG 60
Query: 110 PAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACM 169
P I+GHA +V+ A+ E +KG SFGAP LE LAE+VI VPSIEMVR VNSGTEA M
Sbjct: 61 PMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVPSIEMVRMVNSGTEATM 120
Query: 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 229
+RLAR +TGR++IIKFEGCYHGHAD LVKAGSG ATLGLPDSPGVP+ TLTAP
Sbjct: 121 SAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP 180
Query: 230 FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289
+ND+ A+E LFE EIAA+I+EPV GN G + PKP FL +R + E+GALLIFDEVM
Sbjct: 181 YNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVM 240
Query: 290 TGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 349
TGFR+A GGAQ Y+GVTPDLTTLGKIIGGGLPVGA+GGRR+IME +AP GP+YQAGTLSG
Sbjct: 241 TGFRVALGGAQGYYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSG 300
Query: 350 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409
NPLAM AG+ TLK LKEPG YE L +T L +G+ +A KKAG + + MFG FFT
Sbjct: 301 NPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFT 360
Query: 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEK 469
+ PV N+ DAKKS+T +FARF+ ML+EGVY APSQFEAGF S AH+ +DI+ T+ AA K
Sbjct: 361 DEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQFEAGFVSAAHTDEDIEKTLEAARK 420
Query: 470 VLRQI 474
+
Sbjct: 421 AFAAL 425
>gnl|CDD|223080 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme
metabolism].
Length = 432
Score = 649 bits (1677), Expect = 0.0
Identities = 249/424 (58%), Positives = 314/424 (74%), Gaps = 1/424 (0%)
Query: 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPA 111
KSE F AK+++PGGVNSPVRAFKSVGG PI + KG+++ D+DGNEYIDYV WGP
Sbjct: 6 KSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPL 65
Query: 112 IIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGV 171
I+GHA V+ A+ E +++G SFGAP LE LAE++I VPSIE VRFVNSGTEA M
Sbjct: 66 ILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSA 125
Query: 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231
+RLARA+TGR++IIKFEGCYHGH+D LVKAGSG ATLG P SPGVP TL P+N
Sbjct: 126 IRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN 185
Query: 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291
D+ ALE FE +IAA+I+EPV GN G + P+P FL +R +T+E+GALLIFDEV+TG
Sbjct: 186 DLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITG 245
Query: 292 FRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 351
FR+A GGAQ Y+GV PDLTTLGKIIGGGLP+GA+GGR +IME +AP GP+YQAGTLSGNP
Sbjct: 246 FRVALGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNP 305
Query: 352 LAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410
LAM AG+ TL+ L G YE L+ + L +G+ A ++ G + + MFG FFTE
Sbjct: 306 LAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTE 365
Query: 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKV 470
V N+ DAK+S+ +FA+F+ +L GVY APSQFEAGF S AH+ +DI T+ AA++
Sbjct: 366 EGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFEAGFLSTAHTEEDIDRTLEAADEA 425
Query: 471 LRQI 474
+++
Sbjct: 426 FKEL 429
>gnl|CDD|233100 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase. This
enzyme, glutamate-1-semialdehyde-2,1-aminomutase
(glutamate-1-semialdehyde aminotransferase, GSA
aminotransferase), contains a pyridoxal phosphate
attached at a Lys residue at position 283 of the seed
alignment. It is in the family of class III
aminotransferases [Biosynthesis of cofactors, prosthetic
groups, and carriers, Heme, porphyrin, and cobalamin].
Length = 423
Score = 615 bits (1587), Expect = 0.0
Identities = 254/423 (60%), Positives = 317/423 (74%)
Query: 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPA 111
KSE F AK++ PGGVNSPVRAFKSVG P KG++++D+DGNEYIDYV SWGP
Sbjct: 1 KSENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPL 60
Query: 112 IIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGV 171
I+GHA +V+ A+ E +++GTS+GAP E +LA+ +IS VPS+EMVRFVNSGTEA M
Sbjct: 61 ILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSA 120
Query: 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231
+RLAR +TGR++IIKFEGCYHGH D LVKAGSG ATLGLP SPGVP+ TL P+N
Sbjct: 121 VRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYN 180
Query: 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291
D+ ALE +FE EIA +I+EPV GN G + PKP+FL +R +T+E G+LLIFDEVMTG
Sbjct: 181 DLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTG 240
Query: 292 FRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 351
FR+A GGAQEYFGV PDLTTLGKIIGGGLPVGA+GGRR+IME +AP GP+YQAGTLSGNP
Sbjct: 241 FRVALGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNP 300
Query: 352 LAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 411
LAM AG+ TLK L E G Y L+++ L +G+ + + G + MF FFTE
Sbjct: 301 LAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEE 360
Query: 412 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 471
V N+ DAKKS+T FA+F+ ML++GV+ PSQFEA F S AH+ +DI++TI AAE+V
Sbjct: 361 EVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFLSAAHTEEDIENTIEAAEEVF 420
Query: 472 RQI 474
++
Sbjct: 421 AEL 423
>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 428
Score = 533 bits (1376), Expect = 0.0
Identities = 215/429 (50%), Positives = 297/429 (69%), Gaps = 3/429 (0%)
Query: 47 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGG-QPIVFDSVKGSHMWDIDGNEYIDYV 105
NFT KSE A E + GGVNSP R++K+VGG P+V + KG++ +D+DGN+YIDY+
Sbjct: 2 NFT--KSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYL 59
Query: 106 GSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGT 165
++GP I GHA + A+ E + G +G P LE A+M+ A+PS+E VRFVNSGT
Sbjct: 60 AAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIPSLEKVRFVNSGT 119
Query: 166 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYET 225
EA M +R+ARA+TGR +IIKF GCYHGH+D LV AGSG +TLG PDS GVPK E
Sbjct: 120 EAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEV 179
Query: 226 LTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285
+T PFND+ AL+ + E+AA+++EP+VGN G + PKP FL A+ + E GAL+I+
Sbjct: 180 ITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIY 239
Query: 286 DEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG 345
DEV+T FR YGGAQ+ GV PDLT LGKIIGGGLP+GAYGGR+DIME VAP GP YQAG
Sbjct: 240 DEVITAFRFMYGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAG 299
Query: 346 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFG 405
T++GNP +M AGI L+ L++ G YE L+++ L +GI++A +K G I + G
Sbjct: 300 TMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKGALT 359
Query: 406 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTIT 465
+FT+ V N++ A++S+ F +F++ ML +G+ APS++EA F + AH+ +DI+ T+
Sbjct: 360 VYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKYEAWFLTTAHTEEDIEETLE 419
Query: 466 AAEKVLRQI 474
A ++ Q+
Sbjct: 420 AVDRAFAQL 428
>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The
major groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase,
alanine-glyoxylate aminotransferase, dialkylglycine
decarboxylase, 4-aminobutyrate aminotransferase,
beta-alanine-pyruvate aminotransferase,
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase, and glutamate-1-semialdehyde
2,1-aminomutase. All the enzymes belonging to this
family act on basic amino acids and their derivatives
are involved in transamination or decarboxylation.
Length = 413
Score = 371 bits (955), Expect = e-125
Identities = 144/426 (33%), Positives = 212/426 (49%), Gaps = 25/426 (5%)
Query: 57 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHA 116
F ++++ G +V P+V +G++++D+DGN Y+D++ G +GH
Sbjct: 2 FERDRKVLWHGY--------TVRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHN 53
Query: 117 DDQVLAALGETMKKGTSFGAP---CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVL 172
+V+ AL E + K T F LAE++++ P ++ V FVNSGTEA L
Sbjct: 54 HPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAAL 113
Query: 173 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG----LPDSPGVPKGATYETLTA 228
+LARA+TGR++II FEG YHG L GS G LP VP Y
Sbjct: 114 KLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAE 173
Query: 229 PFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288
+D+ ALE E + E+AA+I+EP+ G G I P P +L A+R + +++G LLI DEV
Sbjct: 174 LADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEV 233
Query: 289 MTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 347
TGF R A E+FGV PD+ TLGK +GGGLP+GA GR +IM+ PAGP GT
Sbjct: 234 QTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMD-AFPAGPGLHGGTF 292
Query: 348 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407
GNPLA A + L+ L+E G E ++ L + + + +K M G
Sbjct: 293 GGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIE 352
Query: 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS--QFEAGFTSLAHSSDDIQHTIT 465
+ K + A+ + LE G+ PS L + ++I +
Sbjct: 353 LVKDRA-----TKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLD 407
Query: 466 AAEKVL 471
A ++ L
Sbjct: 408 ALDEAL 413
>gnl|CDD|234803 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 433
Score = 329 bits (844), Expect = e-109
Identities = 162/420 (38%), Positives = 229/420 (54%), Gaps = 5/420 (1%)
Query: 47 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVG 106
++++ F+ A + PGGVNSPVRA +SVG P + S G D G +ID+ G
Sbjct: 1 MPSIQEMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCG 60
Query: 107 SWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGT 165
SWG I GH+ ++ A+ + ++GTS+G E + AE + S + +RFV+SGT
Sbjct: 61 SWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGT 120
Query: 166 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYE- 224
EA M +RLAR TGR IIKF GCYHGHAD L G + L +
Sbjct: 121 EATMTAVRLARGITGRSIIIKFLGCYHGHADTLL--QGISFSETSLDTLTHLVDTDLAHP 178
Query: 225 -TLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL 283
TL+ P+ND + + + +A +I EP+ N G + PKP F+ I + + G+L
Sbjct: 179 LTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLS 238
Query: 284 IFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ 343
I DEV+TGFR+A GGA + V PD+T GKI+GGGLP A + IM+ +AP G ++Q
Sbjct: 239 IMDEVVTGFRVAQGGAAAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQ 298
Query: 344 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 403
AGTLSGNPLAM AG ++ +E G Y L+ + I + + G + M
Sbjct: 299 AGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSM 358
Query: 404 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHT 463
F FFF E N +A+ S+ F FY+ +GVY +PS FEA F S AHS +++ +
Sbjct: 359 FSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEASFLSSAHSMENLDYA 418
>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase;
Provisional.
Length = 431
Score = 232 bits (594), Expect = 2e-71
Identities = 129/426 (30%), Positives = 202/426 (47%), Gaps = 42/426 (9%)
Query: 60 AKELMPGGVNSPVRAFKSV-GGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADD 118
L+PGG ++ + P G+H+WD+DGNEYI+Y +GHA
Sbjct: 8 LHALIPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYP 67
Query: 119 QVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 178
V+ A+ E ++ G +F P +E AE + + +MV+F +G++A +RLARA+
Sbjct: 68 PVVEAVREALQDGCNFTRPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAY 127
Query: 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238
TGR+ + + C PF + T P S G+P + T+T +ND+++LE
Sbjct: 128 TGRDLVAR---CAD---HPFFSTDDWFIGTT--PMSAGIPASVSALTVTFRYNDIASLEA 179
Query: 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG 298
LFE++ G IA +ILEP + P+ FL+ +RR+ ENGAL I DE++TGFR G
Sbjct: 180 LFEDHPGRIACVILEPATADE----PQDGFLHEVRRLCHENGALFILDEMITGFRWHMRG 235
Query: 299 AQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG---------TLSG 349
AQ+ +G+ PDL+ GK +G G V A G+R+ ME+ G + T
Sbjct: 236 AQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMEL----GGLEHTDRERVFLLSTTHGA 291
Query: 350 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG---HAICGGYISGMFGF 406
A+ A I T+ ++ E L++ +L G+ +A + G H G +
Sbjct: 292 ETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCL--T 349
Query: 407 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITA 466
+ T + + S+ + F + + GV PS S AH DI+ TI A
Sbjct: 350 YSTLDG-----NGQPSQAFR-TLFLQETIRRGV-LMPSL----VVSYAHGDADIERTIDA 398
Query: 467 AEKVLR 472
L
Sbjct: 399 VHGALG 404
>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III.
Length = 338
Score = 222 bits (569), Expect = 6e-69
Identities = 102/318 (32%), Positives = 148/318 (46%), Gaps = 34/318 (10%)
Query: 89 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLA 145
KG ++D+DG Y+D++ +GH +++ A+ E K T LA
Sbjct: 6 KGVWLYDVDGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKLTHTSFRAFTTEPALQLA 65
Query: 146 EMVISAVP-SIEMVRFVNSGTEACMGVLRLARA------FTGRERIIKFEGCYHGHADPF 198
E + P ++ V F+NSG+EA ++LAR TG+ +II F G +HG
Sbjct: 66 EKLAQLTPGGLDRVFFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGFHGRTLGA 125
Query: 199 L-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN-----------LFENNKGE 246
L V SG P PGV P+ D+ A E + +
Sbjct: 126 LSVTGSSGYKKGFGPSLPGVYF--------LPYPDLEAAEEELACADEALRLIKAVHDDN 177
Query: 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV 305
IAA+I+EP+ G G + P P FL +R I K++G LLI DEV TGF R A E++GV
Sbjct: 178 IAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLFACEHYGV 237
Query: 306 TPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 365
TPD+ TL K + GGLP+ A +IM+ P GT GNPLA A + L ++
Sbjct: 238 TPDIMTLAKALTGGLPLSAVLATAEIMQAFHPGS---HGGTFGGNPLACAAALAVLDIIE 294
Query: 366 EPGTYEYLNKITGELTQG 383
+ + + L +G
Sbjct: 295 DENLLQNAQEKGDYLRKG 312
>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino
acid transport and metabolism].
Length = 404
Score = 211 bits (539), Expect = 1e-63
Identities = 106/319 (33%), Positives = 150/319 (47%), Gaps = 27/319 (8%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK----GTSFGAP 137
P+V +G+++WD G EY+D+ +GH ++ AL E +K F
Sbjct: 25 PVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNE 84
Query: 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG---RERIIKFEGCYHGH 194
E LAE ++ P + V F NSG EA L+LAR +TG + +II FE +HG
Sbjct: 85 PQAE--LAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGR 142
Query: 195 ADPFLVKAGSG--VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 252
+ A P PG PFND+ ALE + + AA+I+
Sbjct: 143 T-LGALSATGQPKYRKGFGPLLPGF--------RHVPFNDIEALEAAID---EDTAAVIV 190
Query: 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311
EP+ G G I P+FL A+R + E+GALLI DEV TG R A E++GV PD+ T
Sbjct: 191 EPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILT 250
Query: 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371
L K +GGG P+GA +I P T GNPLA + L+ L E G E
Sbjct: 251 LAKALGGGFPIGAMLATEEIASAFTPGD---HGSTFGGNPLACAVALAVLEVLLEEGLLE 307
Query: 372 YLNKITGELTQGIIDAGKK 390
+ + L Q + + ++
Sbjct: 308 NVREKGEYLLQRLRELKRR 326
>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related
aminotransferases [Amino acid transport and metabolism].
Length = 447
Score = 205 bits (523), Expect = 7e-61
Identities = 104/315 (33%), Positives = 154/315 (48%), Gaps = 34/315 (10%)
Query: 77 SVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---- 132
P+V +G++++D+DGNEY+D++ +GH +V+ A+ + K
Sbjct: 34 GRFRFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT 93
Query: 133 --SFGAPCLLENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFE 188
+ P + LAE + + P V F NSG EA +++ARA+TGR +I F+
Sbjct: 94 RDLYYEPYVE---LAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFD 150
Query: 189 GCYHGH--------ADPFLVKAGSG-----VATLGLPDSPGVPKGATYETLTAPFNDVSA 235
G +HG KAG G V + P+ P G E +
Sbjct: 151 GAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA--LEY 208
Query: 236 LENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 292
+E + + E+AAII+EP+ G G I P FL A+R++ +E+G LLI DEV TGF
Sbjct: 209 IERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGF 268
Query: 293 -RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 351
R A E+FGV PD+ TL K +GGGLP+ A GR +IM+ GT GNP
Sbjct: 269 GRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMDWPPGG----HGGTFGGNP 324
Query: 352 LAMTAGIHTLKRLKE 366
+A A + L ++E
Sbjct: 325 VACAAALAVLDVIEE 339
>gnl|CDD|233098 TIGR00707, argD, transaminase, acetylornithine/succinylornithine
family. This family of proteins, for which ornithine
aminotransferases form an outgroup, consists mostly of
proteins designated acetylornithine aminotransferase.
However, the two very closely related members from E.
coli are assigned different enzymatic activities. One is
acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an
enzyme of arginine biosynthesis, while another is
succinylornithine aminotransferase, an enzyme of the
arginine succinyltransferase pathway, an
ammonia-generating pathway of arginine catabolism (See
MEDLINE:98361920). Members of this family may also act
on ornithine, like ornithine aminotransferase (EC
2.6.1.13) (see MEDLINE:90337349) and on
succinyldiaminopimelate, like
N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17,
DapC, an enzyme of lysine biosynthesis) (see
MEDLINE:99175097).
Length = 379
Score = 181 bits (461), Expect = 1e-52
Identities = 104/332 (31%), Positives = 162/332 (48%), Gaps = 38/332 (11%)
Query: 75 FKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK---- 130
+ G P+ KG++++D++G EY+D+V +GHA +++ AL E ++K
Sbjct: 3 MNTYGRLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHV 62
Query: 131 GTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG-----RERII 185
+ E LAE + + V F NSG EA L+LAR +TG +++II
Sbjct: 63 SNLYYTEPQEE--LAEK-LVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKII 119
Query: 186 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATY-ETLT-----APFNDVSALENL 239
FE +HG T+G + G PK E L AP+ND+ +L+
Sbjct: 120 AFENSFHGR-------------TMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKA 166
Query: 240 FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 298
+ E AA+I+EP+ G G +FL A+R I K+ ALLIFDEV TG R
Sbjct: 167 ID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFF 223
Query: 299 AQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 358
A E++G+ PD+ TL K +GGG+P+GA + ++ E P T GNPLA A +
Sbjct: 224 AYEHYGIEPDIITLAKGLGGGVPIGATLAKEEVAEAFTPGD---HGSTFGGNPLACAAAL 280
Query: 359 HTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 390
L+ +++ E + + + + + GK
Sbjct: 281 AVLEVIEKERLLENVKEKGDYFKERLEELGKN 312
>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.
Length = 396
Score = 173 bits (442), Expect = 1e-49
Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 44/305 (14%)
Query: 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTS--FGA 136
PI F +G+ +WD DG EY+D++ +GH +++ A+ E K TS +
Sbjct: 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYI 80
Query: 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIK-----FEGCY 191
E LAE + + ++ V F NSG EA ++LAR + ++ I K E +
Sbjct: 81 EPQEE--LAEK-LVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSF 137
Query: 192 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETL-----TAPFNDVSALENLFENNKGE 246
HG +ATL P +G +E L PFND+ AL+ +
Sbjct: 138 HGRT----------LATLSATGQPKYQEG--FEPLVEGFIYVPFNDIEALKAAITDK--- 182
Query: 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-----RLAYGGAQE 301
AA++LEP+ G G ++L A+R + ENG LLI DEV TG AY +
Sbjct: 183 TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAY----Q 238
Query: 302 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 361
++G+ PD+ TL K +GGG+P+GA + + ++ P T GNPLA A + +
Sbjct: 239 HYGIEPDIMTLAKGLGGGVPIGAVLAKEKVADVFTPGD---HGSTFGGNPLACAAALAVI 295
Query: 362 KRLKE 366
+ ++E
Sbjct: 296 EIIEE 300
>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional.
Length = 433
Score = 172 bits (438), Expect = 1e-48
Identities = 103/316 (32%), Positives = 146/316 (46%), Gaps = 49/316 (15%)
Query: 83 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTSFGA---P 137
+ +G + + +DG EY+D+ A +GH +V+ A+ E K G
Sbjct: 27 LPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYE 86
Query: 138 CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD 196
+L+ LAE + P ++ F NSG EA G L+LA+ T R II F GC+HG
Sbjct: 87 SILK--LAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRT- 143
Query: 197 PFLVKAGSGVATLGL------------PDSPGV-----------PKGATYETLTAPFNDV 233
+ L + P V PKG E +
Sbjct: 144 ---------LGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFL--ECL 192
Query: 234 SALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291
LE+LF++ E+AA+I+EPV+G G+I P FL +R I +G LLIFDEV TG
Sbjct: 193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTG 252
Query: 292 F-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 350
F R A + FGV PD+ T+ K I GLP+ A +++ME P G T GN
Sbjct: 253 FGRTGEWFAAQTFGVVPDIMTIAKGIASGLPLSAVVASKELMEQ-WPLGS--HGTTFGGN 309
Query: 351 PLAMTAGIHTLKRLKE 366
P+A A + TL+ +KE
Sbjct: 310 PVACAAALATLEVIKE 325
>gnl|CDD|235917 PRK07046, PRK07046, aminotransferase; Validated.
Length = 453
Score = 171 bits (436), Expect = 3e-48
Identities = 98/315 (31%), Positives = 145/315 (46%), Gaps = 23/315 (7%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDY-VGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLL 140
P+ +G+ D+DG+ Y D+ +G G A+ GH+ V AL E ++G + P
Sbjct: 58 PLFVAEARGARFTDVDGHRYDDFCLGDTG-AMFGHSPAPVARALAEQARRGLTTMLPSED 116
Query: 141 ENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV 200
+ E ++ + + + T+A VLR ARA TGR +I+ F GCYHG D V
Sbjct: 117 AAWVGEE-LARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFV 175
Query: 201 KAGSGVAT-----LGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255
G LG AT T FND++ALE G++AA++ EP
Sbjct: 176 DLVDGRPVQRPGLLG----QVHDLTAT--TRVVEFNDLAALEAALA--DGDVAAVLAEPA 227
Query: 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKI 315
+ N G + P+P F A+R +T+ G LL+ DE T GG G+ PD +GK
Sbjct: 228 MTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEPDFLVVGKP 286
Query: 316 IGGGLPVGAYGGRRDI---MEMVAPAGPMYQAG---TLSGNPLAMTAGIHTLKRLKEPGT 369
I GG+P YG ++ + + P +G TLS N LAM A TL +
Sbjct: 287 IAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAA 346
Query: 370 YEYLNKITGELTQGI 384
Y ++ + L G+
Sbjct: 347 YAHMLALAARLAAGL 361
>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 165 bits (419), Expect = 5e-46
Identities = 100/317 (31%), Positives = 156/317 (49%), Gaps = 30/317 (9%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG------ 135
P+V + + +WDI+GNEYID++ +GH + +V+ A+ E K +
Sbjct: 24 PLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFP 83
Query: 136 -APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 194
P LL L E+ P V F SG++A G ++ ARA+T R +I+ + Y+G
Sbjct: 84 VEPLLLAEKLIEIAPGDNPK---VSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGS 140
Query: 195 --------ADPFLVKAG----SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242
F V+A S V + PD P G + V ++ FE
Sbjct: 141 TYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKM--ECVEYIKEKFEG 198
Query: 243 N--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299
+AA+ EP+ G++G I P D+ +++I E+G LL+ DEV +G R A
Sbjct: 199 EVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFA 258
Query: 300 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIH 359
E+FGV PD+ TLGK +GGGLP+ A GR +IM+ + P + TLSGNP+A A +
Sbjct: 259 IEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLAHAF---TLSGNPVASAAALA 315
Query: 360 TLKRLKEPGTYEYLNKI 376
++ ++E + K+
Sbjct: 316 VIEEIEEKNLLKRAEKL 332
>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional.
Length = 441
Score = 165 bits (420), Expect = 5e-46
Identities = 107/316 (33%), Positives = 153/316 (48%), Gaps = 43/316 (13%)
Query: 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK-----GTSFG 135
P+V + +G + D+DGN Y+D+ +GHA +V+ A+ E +K T F
Sbjct: 36 YPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFY 95
Query: 136 APCLLENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 193
+E LAE ++ P V F NSGTE+ +++AR TGR+ II F G +HG
Sbjct: 96 YEPAVE--LAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHG 153
Query: 194 -----------------HADPFLVKAGSGVATLGLPDSPGVPKGA-TYETLTAPFNDVSA 235
P + GV + P+ P G E N V
Sbjct: 154 RTYGSLSLTASKPVQRKGFFPLM----PGVIHVPYPNPYRNPWGIENPEECG---NAVLD 206
Query: 236 L--ENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291
+ LF+ E+AAII+EP+ G G++ P +F +R++ + G LLI DEV TG
Sbjct: 207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTG 266
Query: 292 F-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 350
R A E+FGV PD+ TL K I GGLP+GA GR ++M + P G A T GN
Sbjct: 267 MGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFL--PPGS--HANTFGGN 322
Query: 351 PLAMTAGIHTLKRLKE 366
P+A A + TL+ L+E
Sbjct: 323 PVAAAAALATLEELEE 338
>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional.
Length = 377
Score = 162 bits (413), Expect = 1e-45
Identities = 104/300 (34%), Positives = 149/300 (49%), Gaps = 23/300 (7%)
Query: 75 FKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GT 132
F + G PI KG+ + D +G Y+D+ +GH V A+ E +
Sbjct: 5 FPTYGRFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHV 64
Query: 133 SFGAPCLLENVLAEMV---ISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 189
S L N L E V ++ + ++V F NSG EA L+LAR TG+ +I+ FE
Sbjct: 65 S----NLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQ 120
Query: 190 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249
+HG F + +G + P +P G T+ PFND+ AL+ + E+AA
Sbjct: 121 SFHGRT--FGTMSATGQEKIKEGFGPLLP-GFTH----VPFNDIKALKEVMN---EEVAA 170
Query: 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308
++LE V G G I P FL ++ + K+ GALLI DEV TG R A E FG+ PD
Sbjct: 171 VMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD 230
Query: 309 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368
+ T+ K +G G+PVGA G++ E+ GP T GNPLAM A L+ +K+P
Sbjct: 231 IVTVAKGLGNGIPVGAMIGKK---ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPS 287
>gnl|CDD|240281 PTZ00125, PTZ00125, ornithine aminotransferase-like protein;
Provisional.
Length = 400
Score = 157 bits (398), Expect = 3e-43
Identities = 97/331 (29%), Positives = 148/331 (44%), Gaps = 45/331 (13%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT----SFGAP 137
P+V KG +WD++G +Y D++ ++ GH ++LAAL +K T +F
Sbjct: 14 PVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYND 73
Query: 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERIIKFEG 189
L LAE I+ + + V +NSG EA L+ AR + + +II G
Sbjct: 74 VL---GLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNG 130
Query: 190 CYHGHADPFLVKAGSGVATLGLPDSPGV-----PKGATYETLTAPFNDVSALENLFENNK 244
+ G + P P +E +NDV ALE L ++
Sbjct: 131 NFSGRT----------IGACSASTDPKCYNNFGPFVPGFEL--VDYNDVEALEKLLQDPN 178
Query: 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG---AQE 301
+AA I+EP+ G +G I P +L + + K+ LLI DE+ TG L G A +
Sbjct: 179 --VAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTG--LGRTGKLLAHD 234
Query: 302 YFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAG-TLSGNPLAMTAGIH 359
+ GV PD+ LGK + GGL P+ A D+M ++ P + G T GNPLA +
Sbjct: 235 HEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPG----EHGSTYGGNPLACAVAVE 290
Query: 360 TLKRLKEPGTYEYLNKITGELTQGIIDAGKK 390
L+ LKE E ++ G+ + KK
Sbjct: 291 ALEVLKEEKLAENAQRLGEVFRDGLKELLKK 321
>gnl|CDD|235112 PRK03244, argD, acetylornithine aminotransferase; Provisional.
Length = 398
Score = 156 bits (396), Expect = 6e-43
Identities = 108/325 (33%), Positives = 151/325 (46%), Gaps = 45/325 (13%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTS--FGAP 137
P+ +G+ +WD+DG EY+D +G +GHA V+ A+ + S F
Sbjct: 26 PLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATE 85
Query: 138 CLLENVLAEMVIS--AVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA 195
+ LAE ++ P V F NSG EA +LAR TGR +I+ EG +HG
Sbjct: 86 PQIA--LAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRT 142
Query: 196 DPFLVKAGSGVATLGLPDSPGVPKGATYETLTA-----PFNDVSALENLFENNKGEIAAI 250
G+ T G P K A +E L P+ DV AL + + AA+
Sbjct: 143 ------MGALALT-GQPA-----KRAPFEPLPGGVEHVPYGDVDALAAAVD---DDTAAV 187
Query: 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 309
LEP+ G +G + P +L A R IT +GALL+ DEV TG R A ++ GVTPD+
Sbjct: 188 FLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV 247
Query: 310 TTLGKIIGGGLPVGAYGGRRDIMEMVA--PAGPMYQAG----TLSGNPLAMTAGIHTLKR 363
TL K +GGGLP+GA +A PA + G T GNP+A A + L
Sbjct: 248 VTLAKGLGGGLPIGA---------CLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDT 298
Query: 364 LKEPGTYEYLNKITGELTQGIIDAG 388
+ G E ++ +L GI G
Sbjct: 299 IASEGLLENAERLGEQLRAGIEALG 323
>gnl|CDD|236032 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional.
Length = 425
Score = 151 bits (383), Expect = 5e-41
Identities = 109/333 (32%), Positives = 160/333 (48%), Gaps = 42/333 (12%)
Query: 76 KSVGGQPIVF-DSVKGSHMWDIDGNEYIDYVGSWGPAII--GHADDQVLAALGETMKKGT 132
+ VG ++ D + + +WD +G YID+ G A++ GH +V+AA+ + + T
Sbjct: 16 RGVGMTTQIYADRAENAEIWDKEGRRYIDFAA--GIAVVNTGHRHPRVIAAVKAQLDRFT 73
Query: 133 SFGAPCL-LEN--VLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 187
+ EN LAE + + VP + FV +G EA +++ARA TGR +I F
Sbjct: 74 HTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAF 133
Query: 188 EGCYHGHADPFL----------VKAGSGVATLGLPDSPGVP-----KGATYETLTAPFND 232
G +HG F+ K G G +PD VP G + E
Sbjct: 134 GGGFHGRT--FMGMSLTGKVVPYKVGFGAM---MPDVYHVPFPVELHGVSVE------QS 182
Query: 233 VSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290
++AL+ LF+ + +AAII+EPV G GF F+ A+R + ++G LLI DEV T
Sbjct: 183 LAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT 242
Query: 291 GF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 349
GF R A E+ V DLTT+ K + GG P+ A GR +IM+ P G GT G
Sbjct: 243 GFARTGKLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPGG---LGGTYGG 299
Query: 350 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 382
NPL + A L ++E E N++ L Q
Sbjct: 300 NPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQ 332
>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase [Coenzyme metabolism].
Length = 449
Score = 151 bits (384), Expect = 6e-41
Identities = 90/328 (27%), Positives = 127/328 (38%), Gaps = 54/328 (16%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK------GTSFG 135
P V +G ++ DIDG Y+D + GH ++ A+ + + K G
Sbjct: 27 PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTH 86
Query: 136 APCLLENVLAEMVISAVPSIEM--VRFVNSGTEACMGVLRLARAF------TGRERIIKF 187
P + LAE + P + V F +SG+EA L++A + R++ I
Sbjct: 87 EPAIE---LAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISR 143
Query: 188 EGCYHGHADPFLVKAGSGVATLGLPDSPG---------------------VPKGATYETL 226
YHG + + + +G E
Sbjct: 144 RNGYHG----------DTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGD 193
Query: 227 TAPFNDVSALENLFE-NNKGEIAAIILEPVVG-NSGFIAPKPDFLNAIRRITKENGALLI 284
LE L + IAA I+EPVVG G + P P +L +R I + G LLI
Sbjct: 194 EEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLI 253
Query: 285 FDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIME--MVAPAGP 340
DEV TGF R A E+ G+ PD+ L K + GG LP+ A I E AG
Sbjct: 254 ADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGA 313
Query: 341 MYQAGTLSGNPLAMTAGIHTLKRLKEPG 368
T SGNPLA A + L L+E
Sbjct: 314 FMHGHTYSGNPLACAAALANLDILEEED 341
>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated.
Length = 425
Score = 150 bits (381), Expect = 9e-41
Identities = 107/337 (31%), Positives = 158/337 (46%), Gaps = 59/337 (17%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAII--GHADDQVLAALGETMKKGTSFGAPCL 139
PI D + +WD++G EY+D+ G G A++ GH +V+AA+ +KK C
Sbjct: 24 PIFADRAENCRVWDVEGREYLDFAG--GIAVLNTGHLHPKVVAAVEAQLKK---LSHTCF 78
Query: 140 LENVLAEMVISAVPSIEMVRFVN---------------SGTEACMGVLRLARAFTGRERI 184
V++ P +E+ +N +G+EA +++ARA T R +
Sbjct: 79 -------QVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGV 131
Query: 185 IKFEGCYHGHADPFLVKAGSGVATLGL-----PDSPGV---PKGATYETLTAPFNDVS-- 234
I F G YHG TL L P S G+ P P + VS
Sbjct: 132 IAFTGAYHGRT----------HYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSED 181
Query: 235 ----ALENLFENNK--GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288
++E +F+N+ +IAAII+EPV G GF A P F+ +R + E+G +LI DEV
Sbjct: 182 DAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEV 241
Query: 289 MTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 347
TG R A E GV DLTT K I GG P+ GR ++M+ +AP G GT
Sbjct: 242 QTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGG---LGGTY 298
Query: 348 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 384
+GNP+A A + LK ++ + N + +L G+
Sbjct: 299 AGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGL 335
>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional.
Length = 395
Score = 149 bits (379), Expect = 1e-40
Identities = 99/300 (33%), Positives = 146/300 (48%), Gaps = 33/300 (11%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS-----FGA 136
IVF KGS ++D +G Y+D++ W +GH + ++ AL +K + +
Sbjct: 19 DIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNE 78
Query: 137 PCL-LENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF-----TGRERIIKFEGC 190
P L +L + + V F NSG EA G ++LAR + G II F+
Sbjct: 79 PMAKLAGLL-----TQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHS 133
Query: 191 YHGHADPFLVKAG-SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249
+HG + +G G T+ P PG PK A ND++++E L + + A
Sbjct: 134 FHGRTLATMSASGKPGWDTIFAPQVPGFPK--------AELNDIASVEKLITD---KTVA 182
Query: 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308
++LEPV G G I +F+ +R +TK++G LLI DEV TG R A E G+ PD
Sbjct: 183 VMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD 242
Query: 309 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368
+ TLGK IGGG+P+ A + VA Q GT +GNPL G+ + +L PG
Sbjct: 243 IMTLGKGIGGGVPLAALLAK----AEVAVFEAGDQGGTYNGNPLMTAVGVAVISQLLAPG 298
>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional.
Length = 445
Score = 147 bits (374), Expect = 2e-39
Identities = 86/315 (27%), Positives = 142/315 (45%), Gaps = 44/315 (13%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 141
P+V D G+ + D+DG YID + S +GHA +V+ A+ K + P +
Sbjct: 25 PLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHY-TPAYMY 83
Query: 142 NV----LAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG-- 193
+ LA+ + P + V F SG++A G+++ ARA+TGR II F YHG
Sbjct: 84 HEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGST 143
Query: 194 ---------------HADPFLVKAGSGVATLGLPDS----PGVPKGATYETLTAPFNDVS 234
P L G + PD P E AP +
Sbjct: 144 YGSLSMSGISLNMRRKYGPLL----PGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE-- 197
Query: 235 ALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 292
+FE E+A I++E + G+ G + P P + A+ + +E+G L D++ G
Sbjct: 198 ----MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGL 253
Query: 293 -RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 351
R + +F +TPDL + GK + GG+P+ A GR++IME + ++ T NP
Sbjct: 254 GRTGKWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAHLF---TTGANP 310
Query: 352 LAMTAGIHTLKRLKE 366
++ A + T+ +++
Sbjct: 311 VSCAAALATIDMIED 325
>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional.
Length = 421
Score = 146 bits (370), Expect = 4e-39
Identities = 105/297 (35%), Positives = 159/297 (53%), Gaps = 23/297 (7%)
Query: 86 DSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLEN 142
+ + + +WD++G EYID+ GH +V+AA+ + + + T P
Sbjct: 27 ERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYV 86
Query: 143 VLAEMVISAVPSIE---MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL 199
LAE + + P I+ F +G EA +++ARA+TGR +I F G +HG L
Sbjct: 87 TLAERINALAP-IDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRT--LL 143
Query: 200 VKAGSG-VA--TLGLPDSPGVPKGATYETL---TAPFNDVSALENLFENNKG--EIAAII 251
A +G VA +G PG A Y + +S++E LF+ + ++AAI+
Sbjct: 144 TMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAIL 203
Query: 252 LEPVVGNSGF-IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 309
LEP+ G GF +AP P+F++A+R + E+G LLI DEV TGF R A EY+ V PDL
Sbjct: 204 LEPIQGEGGFNVAP-PEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDL 262
Query: 310 TTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 366
T+ K +GGG+P+ A GR ++M+ AP G GT +GNPLA+ A + L + E
Sbjct: 263 ITMAKSLGGGMPISAVVGRAEVMDAPAPGG---LGGTYAGNPLAVAAALAVLDVIAE 316
>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional.
Length = 389
Score = 144 bits (367), Expect = 5e-39
Identities = 100/314 (31%), Positives = 143/314 (45%), Gaps = 27/314 (8%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTS--FGAP 137
+ F+ +G + D DG Y+D+ +GHA ++ AL E +K S + P
Sbjct: 14 DLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIP 73
Query: 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCY 191
+ LAE ++ + + V F NSG EA ++ AR + R RII FEG +
Sbjct: 74 --EQERLAERLVENSFA-DKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAF 130
Query: 192 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251
HG + G G P VP G PF D+ AL+ N AAI+
Sbjct: 131 HGRTLATIAAGGQEKYLEGF--GPLVP-GFDQ----VPFGDIEALKAAITPN---TAAIL 180
Query: 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 310
+EP+ G G +FL +R++ ENG LLIFDEV G R A E+ GVTPD+
Sbjct: 181 IEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIM 240
Query: 311 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370
+ K IGGG P+GA + + + P T GNPLAM G L + PG
Sbjct: 241 AVAKGIGGGFPLGACLATEEAAKGMTPGT---HGSTYGGNPLAMAVGNAVLDVILAPGFL 297
Query: 371 EYLNKITGELTQGI 384
+ + ++ L Q +
Sbjct: 298 DNVQRMGLYLKQKL 311
>gnl|CDD|215335 PLN02624, PLN02624, ornithine-delta-aminotransferase.
Length = 474
Score = 142 bits (359), Expect = 3e-37
Identities = 96/315 (30%), Positives = 149/315 (47%), Gaps = 31/315 (9%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT----SFGAP 137
P+VF KGS +WD +G +Y+D++ ++ GH +++ AL E +K T +F
Sbjct: 58 PVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYND 117
Query: 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE---------RIIKFE 188
AE + S +MV +N+G E ++LAR + G E I+
Sbjct: 118 KF--PEFAEYLTSMF-GYDMVLPMNTGAEGVETAIKLARKW-GYEKKGIPKNEAIIVSCC 173
Query: 189 GCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247
GC+HG + + AT G P PG K F D+ ALE +FE + I
Sbjct: 174 GCFHGRTLAAISMSCDNEATRGFGPLLPGHLK--------VDFGDLDALEKIFEEDGDRI 225
Query: 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT 306
AA + EP+ G +G + P +L A+R + ++ L+I DE+ TG R A ++ V
Sbjct: 226 AAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVR 285
Query: 307 PDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 365
PD+ LGK +GGG +PV A +D+M + P T GNPLA + L+ ++
Sbjct: 286 PDVVILGKALGGGVIPVSAVLADKDVMLCI---KPGEHGSTFGGNPLASAVAMAALQVVQ 342
Query: 366 EPGTYEYLNKITGEL 380
+ E K+ EL
Sbjct: 343 DEKLAERSAKLGQEL 357
>gnl|CDD|233000 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate
transaminase. All members of the seed alignment have
been demonstrated experimentally to act as EC 2.6.1.62,
an enzyme in the biotin biosynthetic pathway. Alternate
names include 7,8-diaminopelargonic acid
aminotransferase, DAPA aminotransferase, and
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase. The gene symbol is bioA in E. coli and
BIO3 in S. cerevisiae [Biosynthesis of cofactors,
prosthetic groups, and carriers, Biotin].
Length = 417
Score = 140 bits (355), Expect = 5e-37
Identities = 104/348 (29%), Positives = 154/348 (44%), Gaps = 61/348 (17%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 141
P+ + +G +++D DG EYID + SW I GH ++ AA+ E + K LE
Sbjct: 14 PLPIERAEGVYLYDEDGREYIDGISSWWVNIHGHNHPEINAAIKEQLDK---------LE 64
Query: 142 NV------------LAEMVISAVPS-IEMVRFVNSGTEACMGVLRLA------RAFTGRE 182
+V LAE ++ P +E V F +SG+ A L++A + G+
Sbjct: 65 HVMFGGLTHEPAIELAERLVEITPEGLEKVFFSDSGSVAVEVALKMALQYWQNQGRPGKT 124
Query: 183 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG---VPKGATYETLTAPFNDV------ 233
R + F YHG D F + + D G + + +E + P
Sbjct: 125 RFLAFRNGYHG--DTF--------GAMSVGDVGGFHALFEPLLFEVVFIPAPPCYRCWDP 174
Query: 234 --------SALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLI 284
+ALE L E + EIAA I+EP+V G G P++L +R + E G LLI
Sbjct: 175 DDCEAECLAALEALLEEHADEIAAFIVEPLVQGAGGMRFYPPEYLRKLRELCDEYGVLLI 234
Query: 285 FDEVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMV---APAG 339
DE+ TGF R A E+ GVTPD+ L K + GG LP+ A +I E
Sbjct: 235 ADEIATGFGRTGKLFACEHAGVTPDILCLSKGLTGGYLPLAATLTTDEIYEAFYSDDEGK 294
Query: 340 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 387
T +GNPLA A + +L L+E E + +I +L G+
Sbjct: 295 AFMHGHTYTGNPLACAAALASLDLLEEEDWLEQVARIEAQLRAGLAPL 342
>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine
transaminase/acetylornithine transaminase; Provisional.
Length = 406
Score = 138 bits (350), Expect = 1e-36
Identities = 94/282 (33%), Positives = 130/282 (46%), Gaps = 39/282 (13%)
Query: 89 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVL--AE 146
+GS +WD G EYID+ G +GHA + AL E K G E VL A+
Sbjct: 29 EGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAK 88
Query: 147 MVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLV 200
+I A + + V F NSG EA L+LAR + + + I+ F+ +HG F V
Sbjct: 89 KLIDATFA-DRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRT-LFTV 146
Query: 201 KAGSGVATLGLP----DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256
AG G P D +P + A +ND+++ L ++ A+I+EP+
Sbjct: 147 SAG------GQPKYSQDFAPLPPDIRH----AAYNDLNSASALIDDQT---CAVIVEPIQ 193
Query: 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKI 315
G G I FL +R + + ALLIFDEV TG R A ++GVTPD+ T K
Sbjct: 194 GEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKA 253
Query: 316 IGGGLPVGAYGGRRDIMEMVAPAGPMYQAG----TLSGNPLA 353
+GGG P+GA M + G T GNPLA
Sbjct: 254 LGGGFPIGA-------MLTTEKCASVMTVGTHGTTYGGNPLA 288
>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase;
Provisional.
Length = 459
Score = 139 bits (353), Expect = 2e-36
Identities = 91/287 (31%), Positives = 141/287 (49%), Gaps = 19/287 (6%)
Query: 91 SHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCL--LENVLAEMV 148
+ + D G E+ID +G +G +GH + V++A+ + K L L +LA+ +
Sbjct: 74 NTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTL 133
Query: 149 ISAVP-SIEMVRFVNSGTEACMGVLRLARAFT---GRERIIKFEGCYHGHADPFLVKAGS 204
+ P ++ F NSGTE+ L+LA+A+ G+ I G +HG + L + +
Sbjct: 134 AALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGAL--SAT 191
Query: 205 GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK--GE-IAAIILEPVVGNSGF 261
+T P P +P PF ++ A+ K G+ +AA+ILEP+ G G
Sbjct: 192 AKSTFRKPFMPLLP-----GFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGV 246
Query: 262 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG- 319
I P +L A+R++ E GALLI DEV TG R A E+ V PD+ L K +GGG
Sbjct: 247 ILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGV 306
Query: 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 366
+P+GA ++ ++ P T GNPLA A + T+ L E
Sbjct: 307 MPIGATIATEEVFSVLFD-NPFLHTTTFGGNPLACAAALATINVLLE 352
>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase,
prokaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known bacterial examples of the enzyme.
The best archaeal matches are presumed but not trusted
to have the equivalent function. The degree of sequence
difference between this set and known eukaryotic
(mitochondrial) examples is greater than the distance to
some proteins known to have different functions, and so
separate models are built for prokaryotic and eukaryotic
sets. E. coli has two isozymes. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 420
Score = 138 bits (350), Expect = 2e-36
Identities = 98/335 (29%), Positives = 151/335 (45%), Gaps = 30/335 (8%)
Query: 76 KSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF 134
VG P+ +G+ + D+DGN ID+ IGH+ +V+ A+ + + T
Sbjct: 9 SGVGVTLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHT 68
Query: 135 G---APCLLENVLAEMVISAVPSIEMVR--FVNSGTEACMGVLRLARAFTGRERIIKFEG 189
P LAE + P + F NSG EA +++AR++TGR ++ F+
Sbjct: 69 CFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDH 128
Query: 190 CYHGHAD----------PFLVKAGSGV---ATLGLPDSPGVPKGATYETLTAPFNDV-SA 235
+HG + P+ K+G G P G + L+ + +A
Sbjct: 129 GFHGRTNMTMALTAKVMPY--KSGFGPFAPEVYRAPLPYPYRDGLLDKQLS--TDGELAA 184
Query: 236 LENLFENNKG--EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 292
+F + G +AA+++EPV G GFI P F+ A+ +E+G + I DEV TGF
Sbjct: 185 ARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFA 244
Query: 293 RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPL 352
R A E+ G PDL T K + GLP+ GR +IM+ AP G GT +GNPL
Sbjct: 245 RTGAMFACEHEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGG---LGGTYAGNPL 301
Query: 353 AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 387
A A + L ++ G E +I +T +
Sbjct: 302 ACAAALAVLAIIESEGLIERARQIGRLVTDRLTTL 336
>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase;
Provisional.
Length = 364
Score = 134 bits (339), Expect = 2e-35
Identities = 94/286 (32%), Positives = 135/286 (47%), Gaps = 32/286 (11%)
Query: 89 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMV 148
+G ++WD G Y+D + G ++GH + + + E ++K G P EM+
Sbjct: 14 EGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAG-PMFEHEEKEEML 72
Query: 149 --ISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV 206
+S + E V NSGTEA L+ AR +TGR+ II +HG
Sbjct: 73 EELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGR------------ 120
Query: 207 ATLGLPDSPGVPK-GATYETLTA-----PFNDVSALENLFENNKGEIAAIILEPVVGNSG 260
T+G + PK +E L PFNDV A + E E AA+I EP+ G G
Sbjct: 121 -TMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAK---EAITKETAAVIFEPIQGEGG 176
Query: 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGL 320
+ K +F+ +R +T++ GALLI DEV +G R A E++ V PD+ T+GK IG G+
Sbjct: 177 IVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMGKGIGNGV 236
Query: 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 366
PV D+ G T GNPLA A TL+ L+
Sbjct: 237 PVSLTLTNFDV-----ERGK--HGSTFGGNPLACKAVAVTLRILRR 275
>gnl|CDD|179933 PRK05093, argD, bifunctional
N-succinyldiaminopimelate-
aminotransferase/acetylornithine transaminase protein;
Reviewed.
Length = 403
Score = 134 bits (340), Expect = 5e-35
Identities = 96/286 (33%), Positives = 134/286 (46%), Gaps = 47/286 (16%)
Query: 89 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCL--LENV--- 143
+GS +WD G EYID+ G +GH ++ AL E +K L + NV
Sbjct: 30 EGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEK--------LWHISNVFTN 81
Query: 144 -----LAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR--AFT----GRERIIKFEGCYH 192
LA+ +I A + E V F NSG EA +LAR A + II F +H
Sbjct: 82 EPALRLAKKLIDATFA-ERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFH 140
Query: 193 GHADPFLVKAGSGVATLGLPD-SPG---VPKGATYETLTAPFNDVSALENLFENNKGEIA 248
G F V G G P S G P T+ PFND++A++ + +++
Sbjct: 141 GRT-LFTVSVG------GQPKYSDGFGPKPADITH----VPFNDLAAVKAVIDDHT---C 186
Query: 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTP 307
A+++EP+ G G I P+FL +R + ++ ALLIFDEV TG R A ++GVTP
Sbjct: 187 AVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTP 246
Query: 308 DLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLA 353
D+ T K +GGG P+GA +I T GNPLA
Sbjct: 247 DILTSAKALGGGFPIGAMLTTAEIASHFKVG---THGSTYGGNPLA 289
>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model
describes the final step in the biosynthesis of
ornithine from glutamate via the non-acetylated pathway.
Ornithine amino transferase takes L-glutamate
5-semialdehyde and makes it into ornithine, which is
used in the urea cycle, as well as in the biosynthesis
of arginine. This model includes low-GC bacteria and
eukaryotic species. The genes from two species are
annotated as putative acetylornithine aminotransferases
- one from Porphyromonas gingivalis (OMNI|PG1271), and
the other from Staphylococcus aureus (OMNI|SA0170).
After homology searching using BLAST it was determined
that these two sequences were most closely related to
ornithine aminotransferases. This model's seed includes
one characterized hit, from Bacillus subtilis
(SP|P38021).
Length = 401
Score = 133 bits (336), Expect = 2e-34
Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 33/302 (10%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT----SFGAP 137
P+VF +G H+WD++G Y+D++ ++ GH +++ AL E +K T +F
Sbjct: 20 PVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYND 79
Query: 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERIIKFEG 189
E AE V + + V +N+G EA ++LAR + + I+ +G
Sbjct: 80 VFGE--FAEYVTK-LFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKG 136
Query: 190 CYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248
+HG + + + P PG K P+N++ ALE E++ +
Sbjct: 137 NFHGRTLGAISMSTDPDSRTNFGPYVPGFKK--------IPYNNLEALEEALEDHGPNVC 188
Query: 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG---AQEYFGV 305
A I+EP+ G +G + P +L +R + ++ LLI DE+ TG L G ++ V
Sbjct: 189 AFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTG--LGRTGKLLCVDHENV 246
Query: 306 TPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL 364
PD+ LGK + GG PV A D+M + P T GNPLA + L+ L
Sbjct: 247 KPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGE---HGSTYGGNPLACAVAVAALEVL 303
Query: 365 KE 366
+E
Sbjct: 304 EE 305
>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family.
Members of the seed alignment for this protein family
are the enzyme succinylornithine transaminase (EC
2.6.1.81), which catalyzes the third of five steps in
arginine succinyltransferase (AST) pathway, an
ammonia-releasing pathway of arginine degradation. All
seed alignment sequences are found within arginine
succinyltransferase operons, and all proteins that score
above 820.0 bits should function as succinylornithine
transaminase. However, a number of sequences extremely
closely related in sequence, found in different genomic
contexts, are likely to act in different biological
processes and may act on different substrates. This
model is desigated subfamily rather than equivalog,
pending further consideration, for this reason [Energy
metabolism, Amino acids and amines].
Length = 397
Score = 132 bits (334), Expect = 3e-34
Identities = 94/285 (32%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 141
P + +GS +WD G EYID+ G +GHA +++ AL E K G E
Sbjct: 18 PFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNE 77
Query: 142 NV--LAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHG 193
V LA+ ++ A + + V F NSG EA L+LAR + + I+ F+ +HG
Sbjct: 78 PVLRLAKKLVDATFA-DKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHG 136
Query: 194 HADPFLVKAGSGVATLGLP----DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249
F V G G P +P G + AP+ND++A + L + A
Sbjct: 137 RT-LFTVSVG------GQPKYSQGFAPLPGGIKH----APYNDLAAAKALISDKT---CA 182
Query: 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308
+I+EP+ G G + P FL +R + + ALLIFDEV TG R A ++GVTPD
Sbjct: 183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD 242
Query: 309 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLA 353
+ T K +GGG P+GA +I + T GNPLA
Sbjct: 243 ILTSAKALGGGFPIGAMLTTTEIAAHLKVGT---HGTTYGGNPLA 284
>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed.
Length = 451
Score = 132 bits (334), Expect = 5e-34
Identities = 109/338 (32%), Positives = 164/338 (48%), Gaps = 50/338 (14%)
Query: 80 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTSFGA- 136
G P S G+ + D+DGN+YID+ G+ G +GH+ +V AL + + + T F
Sbjct: 35 GIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVM 94
Query: 137 --PCLLENVLAEMVISAVPSI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192
+E LAE + + P + V F+NSG EA +++AR +T R+ II F +H
Sbjct: 95 MYEPYIE--LAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFH 152
Query: 193 GHAD----------PFLVKAGSGVATLGLPDSPGV-----------PKGATYETLTAPFN 231
G P+ K G G P +P V P+G T E
Sbjct: 153 GRTLMTMTMTSKVKPY--KFGFG------PFAPEVYKAPFPYEYRRPEGLTEEQYDDFM- 203
Query: 232 DVSALENLF--ENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289
+ +N F E IAA+++EPV G GFI P F+ +R I E+G L + DE+
Sbjct: 204 -IEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ 262
Query: 290 TGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 348
TGF R A E+F V PDL T+ K +G G+P+ GR++IM+ AP G + GT +
Sbjct: 263 TGFARTGKYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAP-GEL--GGTYA 319
Query: 349 GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIID 386
G+PL A + L +++ E LN EL + +++
Sbjct: 320 GSPLGCAAALAVLDIIEK----ENLNDRAIELGKVVMN 353
>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases. This family
consists of L-diaminobutyric acid transaminases. This
general designation covers both 2.6.1.76
(diaminobutyrate-2-oxoglutarate transaminase, which uses
glutamate as the amino donor in DABA biosynthesis), and
2.6.1.46 (diaminobutyrate--pyruvate transaminase, which
uses alanine as the amino donor). Most members with
known function are 2.6.1.76, and at least some
annotations as 2.6.1.46 in current databases at time of
model revision are incorrect. A distinct branch of this
family contains examples of 2.6.1.76 nearly all of which
are involved in ectoine biosynthesis. A related enzyme
is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also
called GABA transaminase. These enzymes all are
pyridoxal phosphate-containing class III
aminotransferase [Central intermediary metabolism,
Other].
Length = 442
Score = 130 bits (329), Expect = 2e-33
Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 31/320 (9%)
Query: 70 SPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 129
S VR++ P F +G + D++G EY+D++ G +GH + + + ++
Sbjct: 12 SNVRSY--PRKLPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQ 69
Query: 130 KGT---SFGAPCLLENVLAEMVISAVPSIEM---VRFVN-SGTEACMGVLRLARAFTGRE 182
G + L++ E +++ +P +M ++F SG +A ++LA+ +TGR
Sbjct: 70 SGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRT 129
Query: 183 RIIKFEGCYHGHADPFLVKAG------------SGVATLGLPDSPGVPKGATYETLTAPF 230
+I F G +HG L G GV + P P G E +
Sbjct: 130 NVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSN-- 187
Query: 231 NDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287
+ EN E+ + + AA+ILE + G G +A ++L IR +T+++ LI DE
Sbjct: 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDE 247
Query: 288 VMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGT 346
V GF R A E+ G+ PD + K +GGGLP+ + + PAG GT
Sbjct: 248 VQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQPAG---HTGT 303
Query: 347 LSGNPLAMTAGIHTLKRLKE 366
GN LAM G L K+
Sbjct: 304 FRGNQLAMVTGTEALNYWKD 323
>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.
Length = 421
Score = 129 bits (325), Expect = 4e-33
Identities = 99/316 (31%), Positives = 158/316 (50%), Gaps = 21/316 (6%)
Query: 87 SVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENV 143
S + + + D++GNEYID+ GH ++AA+ + +++ T P
Sbjct: 28 SAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVT 87
Query: 144 LAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK 201
LAE + + P F +G EA +++ARA TGR +I F G +HG ++
Sbjct: 88 LAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRT--YMTM 145
Query: 202 AGSG-VA--TLGLPDSPG----VPKGATYETLTAPFNDVSALENLFENN--KGEIAAIIL 252
A +G VA +G PG VP + ++ + + A+E LF+++ ++AAII
Sbjct: 146 ALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQ-DSLDAIERLFKSDIEAKQVAAIIF 204
Query: 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311
EPV G GF + + AIRR+ E+G ++I DEV +GF R A +++ PDL T
Sbjct: 205 EPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMT 264
Query: 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371
+ K + GG+P+ G +IM+ AP G GT +GNPLA+ A L + + E
Sbjct: 265 MAKSLAGGMPLSGVVGNANIMDAPAPGG---LGGTYAGNPLAVAAAHAVLNIIDKESLCE 321
Query: 372 YLNKITGELTQGIIDA 387
N++ L +IDA
Sbjct: 322 RANQLGQRLKNTLIDA 337
>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase.
Length = 382
Score = 125 bits (317), Expect = 4e-32
Identities = 98/350 (28%), Positives = 142/350 (40%), Gaps = 79/350 (22%)
Query: 85 FDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVL 144
F S KG ++D++G EY+D +GH D + A+ E L
Sbjct: 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQ-------------AGTL 47
Query: 145 AEM--VISAVPSIEMVR------------FVNSGTEACMGVLRLARAFTGRER------- 183
A + V +P +E+ + F NSGTEA ++ AR + R R
Sbjct: 48 AHVSNVYHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQ-RVRAPDKKDP 106
Query: 184 -------IIKFEGCYHGHADPFLVKAGSGVATLG-----------LPDSPGVPKGATYET 225
+ F +HG TLG P P +P G T+
Sbjct: 107 AASSATEFVSFSNSFHGR-------------TLGALALTSKEQYRTPFEPLMP-GVTF-- 150
Query: 226 LTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285
+ ++ A L + KG+ AA+ +EPV G G +FL +R + E GALL+F
Sbjct: 151 --VEYGNLEAARKLIQ--KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVF 206
Query: 286 DEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPA-GPMYQ 343
DEV G R Y A E +GV PD+ TL K + GGLP+GA + E VA A P
Sbjct: 207 DEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGGLPIGAV----LVTEKVASAINPGDH 262
Query: 344 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGH 393
T +G PL A + L ++ +PG + K L + + H
Sbjct: 263 GSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPH 312
>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional.
Length = 375
Score = 125 bits (315), Expect = 7e-32
Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 21/291 (7%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 141
I F +G+++ D DG +Y+D+ G +G QV AL + G + +P L
Sbjct: 12 AIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQAL--QKQAGLIWHSPNLYL 68
Query: 142 NVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL 199
N L E V + + + F NSG EA +++AR TG++ II F+ +HG +
Sbjct: 69 NSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSM 128
Query: 200 VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 259
G G GVP +Y A FND+++++ L N AA++LE V G S
Sbjct: 129 SATGQDKIKDGF--GDGVP-HFSY----AIFNDLNSVKALVNKNT---AAVMLELVQGES 178
Query: 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGG 318
G + DF+ A+ +E G LLI DEV TG R A E++G+ PD+ TL K +
Sbjct: 179 GVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLAN 238
Query: 319 GLPVGAYGGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368
G+PVGA + + A G T GN L+M A TL + G
Sbjct: 239 GVPVGAMLAKSSL----GGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAG 285
>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase. Members of
this family are putrescine aminotransferase, as found in
Escherichia coli, Erwinia carotovora subsp. atroseptica,
and closely related species. This pyridoxal phosphate
enzyme, as characterized in E. coli, can act also on
cadaverine and, more weakly, spermidine [Central
intermediary metabolism, Polyamine biosynthesis].
Length = 442
Score = 126 bits (317), Expect = 8e-32
Identities = 95/283 (33%), Positives = 136/283 (48%), Gaps = 19/283 (6%)
Query: 95 DIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCL--LENVLAEMVISAV 152
D GNE+ID +G +G +GH + V+AA+ + K L L +LA+ + +
Sbjct: 71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALT 130
Query: 153 P-SIEMVRFVNSGTEACMGVLRLARAFT---GRERIIKFEGCYHGHADPFLVKAGSGVAT 208
P ++ F NSGTE+ L+LA+A+ G+ I G +HG + L + +
Sbjct: 131 PGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGAL--SATAKPA 188
Query: 209 LGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPK 265
P P +P G + F D+ A+ K ++AAIILEP+ G G I P
Sbjct: 189 FRKPFMPLLP-GFHH----VAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPP 243
Query: 266 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVG 323
+L A+R + E GALLI DEV TG R A E+ GV PD+ L K +GGG +P+G
Sbjct: 244 EGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIG 303
Query: 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 366
A + V P T GNPLA A + T+ L E
Sbjct: 304 ATIATEAVFS-VLFDNPFLHTTTFGGNPLACAAALATINELLE 345
>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional.
Length = 451
Score = 125 bits (316), Expect = 1e-31
Identities = 97/319 (30%), Positives = 140/319 (43%), Gaps = 43/319 (13%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPC--- 138
P+V +GS++WD +G Y+D+ IGH +V+AA+ E + + AP
Sbjct: 36 PMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTV-APAHAN 94
Query: 139 LLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197
+ A ++ P + V F N G +A +R+AR TGR +++ YHG
Sbjct: 95 DARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHG---- 150
Query: 198 FLVKAGSGVATLG----LPDSPGVPKGATYETLTAPFNDVS-------------ALENL- 239
GS + G P+ G + PF S AL +L
Sbjct: 151 ---GTGSAINLTGDPRRWPNDTGRAGVVHF---FGPFLYRSEFHATTEEEECERALAHLE 204
Query: 240 ----FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294
E IAAI+LE V G +G + P P +L +R + +G +LI DEVM GF R
Sbjct: 205 RVIELEG-PSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRT 263
Query: 295 AYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAG-TLSGNPL 352
A E+FGV PDL T K + G +P+G I A Y G T SG+PL
Sbjct: 264 GKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADR--PYPGGLTYSGHPL 321
Query: 353 AMTAGIHTLKRLKEPGTYE 371
A A + T+ ++E G E
Sbjct: 322 ACAAAVATINAMEEEGIVE 340
>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase;
Provisional.
Length = 445
Score = 123 bits (311), Expect = 8e-31
Identities = 111/355 (31%), Positives = 158/355 (44%), Gaps = 72/355 (20%)
Query: 64 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWG----PAIIGHADDQ 119
MP N R FK+ P + S +G + D DG + +D G+ G A GH +
Sbjct: 20 MPFTAN---RQFKA---APRLLVSAEGMYYTDADGRKILD--GTAGLWCCNA--GHGRPE 69
Query: 120 VLAALGETMKK-----GTSFGAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLR 173
++ A+ G P E LAE + P ++ V F NSG+E+ L+
Sbjct: 70 IVEAVARQAATLDYAPAFQMGHPLAFE--LAERLAELAPGGLDHVFFTNSGSESVDTALK 127
Query: 174 LARAF------TGRERIIKFEGCYHG-------------HADPFLVKAGSGV----ATLG 210
+A A+ R R+I E YHG + F GV TL
Sbjct: 128 IALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGG-LLPGVDHLPHTLD 186
Query: 211 LPD---SPGVPK-GATYETLTAPFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPK 265
LP+ S G P+ GA D LE L + IAA+I+EP+ G++G + P
Sbjct: 187 LPENAFSKGQPEHGAE-------LAD--DLERLVALHDASTIAAVIVEPMAGSAGVLVPP 237
Query: 266 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVG 323
+L +R I ++G LLIFDEV+TGF RL A E FGVTPD+ T K + G +P+G
Sbjct: 238 KGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMG 297
Query: 324 AYGGRRDIME--MVAPAGPM-----YQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371
A +I + M P + Y T S +P+A AG+ TL +E +E
Sbjct: 298 AVIASDEIYDAFMQGPEYAIEFFHGY---TYSAHPVACAAGLATLDIYREEDLFE 349
>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 459
Score = 122 bits (307), Expect = 3e-30
Identities = 96/312 (30%), Positives = 145/312 (46%), Gaps = 37/312 (11%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCL-- 139
P+ +G + D++GN+Y+D + G +GH VL ++ + + G L
Sbjct: 41 PLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTT 100
Query: 140 -LENVLAEMVISAVPSIE---MVRFVN-SGTEACMGVLRLARAFTGRERIIKFEGCYHGH 194
L++ +E ++S +P ++F SG +A ++LA+ +TGR +I F G YHG
Sbjct: 101 PLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGM 160
Query: 195 ADPFLVKAG------------SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242
L G GV + P P G E V AL FEN
Sbjct: 161 THGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEA------GVKALTYYFEN 214
Query: 243 NKGEI-------AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294
++ AA+ILE + G G ++L IR +T+++G LLI DEV GF R
Sbjct: 215 FIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFART 274
Query: 295 AYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAM 354
A E+ G+ PD+ + K +GGGLP+ G +++ + P G GT GN LAM
Sbjct: 275 GKMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKE-FDAWQPGG---HTGTFRGNQLAM 330
Query: 355 TAGIHTLKRLKE 366
G+ TLK LKE
Sbjct: 331 ATGLTTLKILKE 342
>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 120 bits (303), Expect = 9e-30
Identities = 99/307 (32%), Positives = 147/307 (47%), Gaps = 56/307 (18%)
Query: 95 DIDGNEYIDYVGSWGPAI--IGHADDQVLAALGETMKKGTSFGAPCLLEN------VLAE 146
D+DGN ID GS G A+ +G++ +V+ A+ E + + F C + +AE
Sbjct: 52 DVDGNRLIDL-GS-GIAVTSVGNSAPRVVEAVREQVAR---FTHTCFMVTPYEGYVAVAE 106
Query: 147 MVISAVPSIEMVRFV--NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD-------- 196
+ P R NSG EA +++AR++TGR+ ++ F+ YHG +
Sbjct: 107 QLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAK 166
Query: 197 --PFLVKAGSGVATLGLPDSPGVPKGATYET-LTAPFNDVSALEN-----------LFEN 242
P+ K+G G P +P V Y ++ P+ D L + E
Sbjct: 167 SMPY--KSGFG------PFAPEV-----YRAPMSYPYRDPKGLATDGEEAAARAITVIEK 213
Query: 243 NKG--EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299
G +AA+I+EP+ G GFI P FL A+ +ENG + I DEV TGF R A
Sbjct: 214 QVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFA 273
Query: 300 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIH 359
E+ G+ PDL T K I GGLP+ A GR +IM+ P G GT GNP+A A +
Sbjct: 274 CEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHPGG---LGGTYGGNPVACAAALA 330
Query: 360 TLKRLKE 366
++ ++E
Sbjct: 331 AIETIEE 337
>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 464
Score = 116 bits (292), Expect = 3e-28
Identities = 95/330 (28%), Positives = 139/330 (42%), Gaps = 72/330 (21%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--------TS 133
P+ +G ++ D++G ++ID + G +GH V+ A+ + + T+
Sbjct: 46 PLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTT 105
Query: 134 ----------FGAPCLLENVLAEMVISAVPSIEMVRFVN-SGTEACMGVLRLARAFTGRE 182
F L E E I +F +GT+A L+L + TGR
Sbjct: 106 PVKDQFVQDLFA--SLPEAFAREAKI---------QFCGPTGTDAVEAALKLVKTATGRS 154
Query: 183 RIIKFEGCYHGHADPFLVKAGS------------GVATL----------GLPDSPGVPKG 220
++ F+G YHG + L G+ GV L GL GV
Sbjct: 155 TVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRAN 214
Query: 221 ATYETLTAPFNDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITK 277
Y LENL ++ + + AA+ILE V G G I ++L +RRIT+
Sbjct: 215 LHY------------LENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITE 262
Query: 278 ENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVA 336
E G LI DE+ +GF R A E+ G+ PD+ L K IGG LP+ R +
Sbjct: 263 EAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWLDTW-- 320
Query: 337 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 366
P AGT GN +AM AG TL+ +KE
Sbjct: 321 --QPGAHAGTFRGNQMAMAAGSATLRYIKE 348
>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional.
Length = 408
Score = 115 bits (289), Expect = 4e-28
Identities = 102/321 (31%), Positives = 143/321 (44%), Gaps = 40/321 (12%)
Query: 83 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTS---FGAP 137
+V + +GS +WD G EY+D +GH D ++AAL E K TS + AP
Sbjct: 24 VVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAP 83
Query: 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR---AFTGR----ERIIKFEGC 190
L LAE +++A E V NSGTEA ++L R + GR I+ F G
Sbjct: 84 PLK---LAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGS 140
Query: 191 YHGHADPFLVKAGSGVATLGLPDSPGVPK-GATYETLTA-----PFNDVSALENLFENNK 244
+HG TL + PK YE L FNDV ALE
Sbjct: 141 FHGR-------------TLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG-- 185
Query: 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF 303
G++AA++LEP+ G G + P FL +R + ++ ALL+ DE+ G R A
Sbjct: 186 GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQE 245
Query: 304 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 363
VTPD+ TL K +GGG P+GA + E + T GNPLA L++
Sbjct: 246 QVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGA---HGTTFGGNPLAAAVARVALRK 302
Query: 364 LKEPGTYEYLNKITGELTQGI 384
L P + + + L G+
Sbjct: 303 LASPQIAANVARQSAALRAGL 323
>gnl|CDD|235656 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 423
Score = 112 bits (284), Expect = 3e-27
Identities = 98/322 (30%), Positives = 138/322 (42%), Gaps = 68/322 (21%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 141
PI +G++++ DG E ID + SW A GH + A+ E + + L+
Sbjct: 25 PIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDR---------LD 75
Query: 142 NV------------LAEMVISAVP-SIEMVRFVNSGTEA-------CMGVLRLARAFTGR 181
+V LA+ +++ P ++ V F +SG+ A + R R GR
Sbjct: 76 HVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRN-RGEPGR 134
Query: 182 ERIIKFEGCYHG--------------HA--DPFLVKAGSGVATLGLPDSPGVPKGATYET 225
R + G YHG HA P L + T P P G T
Sbjct: 135 SRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFE----QVTAPFP-----PDGYEQAT 185
Query: 226 LTAPFNDVSALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLI 284
L ALE L E + GEIAA I+EP+V G G + P +L +RRI +G LLI
Sbjct: 186 L-------DALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLI 238
Query: 285 FDEVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMV---APAG 339
FDE+ TGF R A E GV+PD+ L K + GG LP+ A +I E A
Sbjct: 239 FDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAK 298
Query: 340 PMYQAGTLSGNPLAMTAGIHTL 361
+ + + NPLA A +L
Sbjct: 299 AFMHSPSYTANPLACAAANASL 320
>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase;
Provisional.
Length = 442
Score = 108 bits (272), Expect = 9e-26
Identities = 102/346 (29%), Positives = 148/346 (42%), Gaps = 54/346 (15%)
Query: 64 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAA 123
MP N R FK P + + KG + DG +D GH +++ A
Sbjct: 17 MPFTAN---RQFKK---APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEA 70
Query: 124 LGE---TMKKGTSFG----APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 176
+ + +F L N +AE+ A + V F NSG+E+ L++A
Sbjct: 71 VRAQAGELDYAPAFQMGHPKAFELANRIAEI---APGGLNHVFFTNSGSESVDTALKIAL 127
Query: 177 AF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLG---------LPDSPGVPKGA 221
A+ R R+I E YHG + G V + LP +P
Sbjct: 128 AYHRARGEGSRTRLIGRERGYHG-----VGFGGISVGGIVPNRKAFGALLPGVDHLPH-- 180
Query: 222 TYETLTAPFND---------VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNA 271
T + F+ LE L ++ IAA+I+EPV G++G + P +L
Sbjct: 181 TLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQR 240
Query: 272 IRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRR 329
+R I ++G LLIFDEV+TGF RL A +YFGVTPDL T K + G +P+GA
Sbjct: 241 LREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSS 300
Query: 330 DIMEMV---APAGPMYQAG-TLSGNPLAMTAGIHTLKRLKEPGTYE 371
+I + AG + G T SG+PLA A + TL + G
Sbjct: 301 EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLT 346
>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional.
Length = 443
Score = 102 bits (256), Expect = 1e-23
Identities = 93/331 (28%), Positives = 135/331 (40%), Gaps = 58/331 (17%)
Query: 80 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAI--IGHADDQVLAALGETMKK----GTS 133
V + +G ++ D G Y+D S G A+ +GH+ +V+AA+ + + TS
Sbjct: 11 ATLPVAVAGEGIYLIDATGKRYLD--ASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS 68
Query: 134 FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------TGRERIIK 186
F E LA+ +++A P +E V FV+ G+EA L+LAR + R I
Sbjct: 69 FFTTEPAE-ALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIA 127
Query: 187 FEGCYHGHADPFLVKAGSGVATLG-LPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 245
YHG+ TLG L + + L + VS E G
Sbjct: 128 RRQSYHGN-------------TLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAG 174
Query: 246 E------------------------IAAIILEPVVG-NSGFIAPKPDFLNAIRRITKENG 280
E +AA + E VVG +G + P P + IR + G
Sbjct: 175 ESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYG 234
Query: 281 ALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA 338
LLI DEVM G R A E GV PDL T+ K +G G P+GA I + +A
Sbjct: 235 VLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADG 294
Query: 339 GPMYQAG-TLSGNPLAMTAGIHTLKRLKEPG 368
+Q G T G+ A A + + + E G
Sbjct: 295 SGFFQHGHTYLGHATACAAALAVQRVIAEDG 325
>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.
Length = 396
Score = 101 bits (254), Expect = 1e-23
Identities = 86/298 (28%), Positives = 131/298 (43%), Gaps = 28/298 (9%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 141
PIV +G + D +GN Y+D + ++ GH +++ AL + K T +
Sbjct: 23 PIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVT-LTSRAFHS 81
Query: 142 NVLAEMV--ISAVPSIEMVRFVNSGTEACMGVLRLARAFT--------GRERIIKFEGCY 191
+ L ++ + +MV +N+G EA ++ AR + + II EG +
Sbjct: 82 DQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNF 141
Query: 192 HGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250
HG + + G P PG+ K P+ D+ AL+ N AA
Sbjct: 142 HGRTMAAVSLSSEEEYKRGFGPMLPGIKK--------IPYGDLEALKAAITPNT---AAF 190
Query: 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 309
++EP+ G +G P FL A R + KE L I DE+ TG R A ++ VTPD+
Sbjct: 191 LVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDM 250
Query: 310 TTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 366
LGK +GGG P+ RDI+ + P T GNPLA I L+ L+E
Sbjct: 251 YILGKALGGGVFPISCVAANRDILGVFTPGS---HGSTFGGNPLACAVSIAALEVLEE 305
>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional.
Length = 447
Score = 98.3 bits (245), Expect = 4e-22
Identities = 93/335 (27%), Positives = 137/335 (40%), Gaps = 72/335 (21%)
Query: 89 KGSHMWDIDGNEYIDYVGSWGP--AIIGHADDQVLAALGETMKK--------GTSFGAPC 138
KG +++D +GN+Y D GS G A IGH ++ A+ E ++ TS A
Sbjct: 21 KGVYLYDQNGNKYFD--GSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPA-- 76
Query: 139 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKFEGCYH 192
E + ++ + + FVNSG+EA +++A R G+ +I+ YH
Sbjct: 77 --EKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYH 134
Query: 193 GHADPFLVKAGSGVATLG-----------------LPDSPGVPKGATY---ETLTAPFND 232
G T+G L D P + Y P
Sbjct: 135 G-------------ITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQ 181
Query: 233 VSA---LENLFENNKGE-IAAIILEPVVGNSG-FIAPKPDFLNAIRRITKENGALLIFDE 287
++ LE E E IAA I EP++G +G + P + I+ I L I DE
Sbjct: 182 LACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADE 241
Query: 288 VMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAG 345
VMTG R A E++GV PD+ TLGK +G G P+ A +ME + +G
Sbjct: 242 VMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSG 301
Query: 346 -TLSGNPLAMTAGI--------HTL-KRLKEPGTY 370
TLS NPL+ + H L ++ E G Y
Sbjct: 302 HTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEY 336
>gnl|CDD|233853 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate
aminotransferase. Members of this family of class III
pyridoxal-phosphate-dependent aminotransferases are
diaminobutyrate--2-oxoglutarate aminotransferase (EC
2.6.1.76) that catalyze the first step in ectoine
biosynthesis from L-aspartate beta-semialdehyde. This
family is readily separated phylogenetically from
enzymes with the same substrate and product but involved
in other process such as siderophore (SP|Q9Z3R2) or
1,3-diaminopropane (SP|P44951) biosynthesis. The family
TIGR00709 previously included both groups but has now
been revised to exclude the ectoine biosynthesis
proteins of this family. Ectoine is a compatible solute
particularly effective in conferring salt tolerance
[Cellular processes, Adaptations to atypical
conditions].
Length = 412
Score = 96.2 bits (240), Expect = 1e-21
Identities = 87/354 (24%), Positives = 138/354 (38%), Gaps = 64/354 (18%)
Query: 68 VNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 127
V S R+F P VF+ KGS +WD DG EYID+ G GH + ++ AL +
Sbjct: 10 VRSYCRSF------PTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDY 63
Query: 128 MKKGTSFGAPCLLENVLAEMVISAVPSIE-MVRFVNS-----------------GTEACM 169
+ + ++ + ++ E + F GT A
Sbjct: 64 LAD----------DGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVE 113
Query: 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV--ATLGLPDSPGVPKGATYET-L 226
L+LAR TGR ++ F +HG L G+ G+P S Y+ L
Sbjct: 114 SALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSR--MPYDGYL 171
Query: 227 TAPFNDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL 283
+ ++ E L E++ + AA+ILE V G G ++L + ++ + + LL
Sbjct: 172 GGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILL 231
Query: 284 IFDEVMTGFRLAYGGAQEYF-----GVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAP 337
I D++ G G +F G+ PD+ L K I G GLP+ + ++ P
Sbjct: 232 IVDDIQAG----CGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLA--------LTLIKP 279
Query: 338 A----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 387
P GT GN LA L+ +E + E+ Q +D
Sbjct: 280 ELDVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDR 333
>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional.
Length = 457
Score = 94.2 bits (234), Expect = 9e-21
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 37/313 (11%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK------GTSFG 135
P+V G+ + D+DGN +ID++ A G++ +++ A+ E + G +
Sbjct: 36 PLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHS 95
Query: 136 APCLLENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 193
+ +AE + P IE V F SG++A +++++ T R I+ F G YHG
Sbjct: 96 ERAIR---VAEKLAEISP-IENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHG 151
Query: 194 HA------DPFLVKAGSGVATLGLPDSPGVPKGATYETL------TAPFNDVSALENLFE 241
F G + L +P+ +P Y P ++ + E
Sbjct: 152 QTLGATSVAAFQSSQKRGFSPL-MPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLE 210
Query: 242 N-------NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R 293
N E+AA+ EP+ G++G + P +F ++++ E+G LL+ DEV TG R
Sbjct: 211 NYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGR 270
Query: 294 LAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLA 353
A E+F V PDL GK + G+ + GR+++M++ + + + T + NP+
Sbjct: 271 TGKWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMDLTSGSALL----TPAANPVI 326
Query: 354 MTAGIHTLKRLKE 366
A TL+ ++E
Sbjct: 327 SAAAEATLEIIEE 339
>gnl|CDD|215405 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase.
Length = 504
Score = 94.5 bits (235), Expect = 9e-21
Identities = 103/351 (29%), Positives = 160/351 (45%), Gaps = 50/351 (14%)
Query: 74 AFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYV-GSWGPAIIGHADDQVLAALGETMKKGT 132
++S +P+V + +GS+++DI+G +Y+D + G W A+ G ++ +++AA E + K
Sbjct: 64 GWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTAL-GGSEPRLVAAATEQLNKLP 122
Query: 133 ---SF----GAPCLLENVLAEMVISAVPSIEM--VRFVNSGTEACMGVLRLARAFT---G 180
SF P L LA+ ++ + +M V F NSG+EA ++L + G
Sbjct: 123 FYHSFWNRTTKPSL---DLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALG 179
Query: 181 RE---RIIKFEGCYHGHADPFLVKAG-SGVATL----GLP-------DSP-----GVPKG 220
R + I YHG L+ A SG+ L LP D P +P G
Sbjct: 180 RPNKKKFIARSKSYHGST---LISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLP-G 235
Query: 221 ATYETLTAPFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 279
T E + D LENL E IAA I EPV+G G I P + I+ + K+
Sbjct: 236 ETEEEFSTRLAD--NLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY 293
Query: 280 GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP 337
L I DEV+ F RL + + + PDL +L K + +P+GA +I +++
Sbjct: 294 DILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHS 353
Query: 338 A----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 384
G T SG+P++ + LK KE E++NKI GI
Sbjct: 354 QSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGI 404
>gnl|CDD|234848 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed.
Length = 401
Score = 93.3 bits (232), Expect = 1e-20
Identities = 90/317 (28%), Positives = 132/317 (41%), Gaps = 56/317 (17%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT----SFG-- 135
+V +G +WD DGN Y+D + ++ GH ++LAA+ E + T +F
Sbjct: 24 DVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRND 83
Query: 136 --APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERII 185
AP E ++A+ V +NSG EA ++ R + G+ II
Sbjct: 84 QLAPLYEE-------LAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEII 136
Query: 186 KFEGCYHGH--------ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 237
+HG DP + G G P +PG PF D ALE
Sbjct: 137 VCADNFHGRTLSIVGFSTDP-DARGGFG------PFTPGFR--------VVPFGDAEALE 181
Query: 238 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 296
N A ++EP+ G +G I P + +R + N LI DE+ TG R
Sbjct: 182 AAITPNT---VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK 238
Query: 297 GGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAG-TLSGNPLAM 354
A+E+ G+ D+T +GK + GG PV A +++ ++ P Q G T GNPLA
Sbjct: 239 LLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPG----QHGSTFGGNPLAC 294
Query: 355 TAGIHTLKRLKEPGTYE 371
LK L E G E
Sbjct: 295 AVARAALKVLTEEGMIE 311
>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional.
Length = 1013
Score = 93.6 bits (233), Expect = 4e-20
Identities = 87/305 (28%), Positives = 129/305 (42%), Gaps = 37/305 (12%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK---GTSFGAPC 138
PI F G + D G Y+D + +GHA +V+AA + T +
Sbjct: 607 PIKFVRGWGVWLIDNRGRAYLDCFNN--VCHVGHAHPRVVAAAARQAARLNTNTRYLHDA 664
Query: 139 LLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH--- 194
++ AE + + +P + + FVNSG+EA LRLARA TG+ I + YHG
Sbjct: 665 IVA--YAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTE 722
Query: 195 -----ADPFLVKAGSG----VATLGLPDS-------PGVPKGATYETLTAPFNDVSALEN 238
F K G G V +PDS P G + A +
Sbjct: 723 LIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAE-----QIAA 777
Query: 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AY 296
+ +G A I E + +G I +L + + + G + I DEV GF R+ ++
Sbjct: 778 MAAKGRG-PAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSH 836
Query: 297 GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTA 356
A E GV PD+ T+GK IG G P+GA R+I + + M T GNP++
Sbjct: 837 WWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIAD--SFDNGMEYFNTFGGNPVSCAI 894
Query: 357 GIHTL 361
G+ L
Sbjct: 895 GLAVL 899
>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 460
Score = 92.1 bits (229), Expect = 4e-20
Identities = 78/273 (28%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK---GTSFGAPC 138
P++ + +G ++D++GNEY D V S + GH ++ A+ E + K T G
Sbjct: 39 PLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLAN 98
Query: 139 LLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKFEGCY 191
+ +LAE +I VP ++ V + +SG A +++A + ++R + + Y
Sbjct: 99 VPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAY 158
Query: 192 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV-----------------S 234
HG + A S V + L V +E + P+
Sbjct: 159 HGDT----IGAVS-VGAIDLFHQ--VYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLE 211
Query: 235 ALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 292
LE L + EIAAII+EP+V G G I +L +R + + L I DEV TGF
Sbjct: 212 ELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFG 271
Query: 293 RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGA 324
R A E+ VTPD+ T GK + GG LP+
Sbjct: 272 RTGKMFACEHENVTPDIMTAGKGLTGGYLPIAI 304
>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 429
Score = 92.1 bits (229), Expect = 4e-20
Identities = 90/313 (28%), Positives = 135/313 (43%), Gaps = 34/313 (10%)
Query: 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENV-LAEMVISAVP 153
DG ID + SW A+ G+ ++ AA + K + FG V LA+ ++ +P
Sbjct: 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILP 101
Query: 154 -SIEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKFEGCYHG---HA----DPFL 199
S+ + F +SG+ A +++A + R + YHG HA DP
Sbjct: 102 PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDP-- 159
Query: 200 VKAGSGVATLGLP-----DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 254
V G+ LP P + G + + L++L E EIAA+ILEP
Sbjct: 160 VTGMHGLFNHSLPVQYFLPQPSIKFGEEWND-----EAIEPLQDLLEQKGDEIAALILEP 214
Query: 255 VV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTL 312
VV G G P +L R + + G LLIFDE+ TGF R A E+ GV PD+ +
Sbjct: 215 VVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCI 274
Query: 313 GKIIGGG-LPVGAYGGRRDIMEMV--APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369
GK + GG L + A I + + A T NPLA +++ L E
Sbjct: 275 GKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPW 334
Query: 370 YEYLNKITGELTQ 382
+ + +I +L Q
Sbjct: 335 QQNIQRIEAQLKQ 347
>gnl|CDD|236336 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 472
Score = 90.8 bits (225), Expect = 1e-19
Identities = 91/323 (28%), Positives = 136/323 (42%), Gaps = 59/323 (18%)
Query: 89 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAA-------LGETMKKGTSFGAPCLLE 141
+G+ + DG Y+D V SW + GHA+ ++ AA L + M G + P +
Sbjct: 54 EGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTH-EPAVQ- 111
Query: 142 NVLAEMVISAVPS------IEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKFEG 189
LAE +++ P + V + ++G+ L++A R R R I E
Sbjct: 112 --LAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALEN 169
Query: 190 CYHGHADPFLVKAGSGVATLGLPDSP---GVPKGATYETLTAPFND-------------- 232
YHG + L + D P V E+L AP D
Sbjct: 170 GYHGET----------IGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA 219
Query: 233 ---VSALENLFENNKGEIAAIILEPVVGNSGFI-APKPDFLNAIRRITKENGALLIFDEV 288
AL+ LFE + GEI A+ILEP + +G + P +L R + +GA LI DE+
Sbjct: 220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEI 279
Query: 289 MTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMV---APAGPMYQ 343
TGF R A E GV PDL L K + GG LP+ A + + + +
Sbjct: 280 ATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLH 339
Query: 344 AGTLSGNPLAMTAGIHTLKRLKE 366
+ + +GNPLA A + TL +
Sbjct: 340 SHSYTGNPLACAAALATLDIFAD 362
>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated.
Length = 451
Score = 89.3 bits (222), Expect = 4e-19
Identities = 79/312 (25%), Positives = 130/312 (41%), Gaps = 52/312 (16%)
Query: 80 GQPIVFDSVKGSHMWDIDGNEYIDYV-GSWGPAIIGHADDQVLAALGETMKKGTSFGAPC 138
+V +G+ + DI GN Y+D + G W +G+ ++ A E +K + F
Sbjct: 28 NATMVVAKAEGAWVTDIQGNRYLDGMSGLWC-VNVGYGRKELAEAAYEQLKTLSYF---- 82
Query: 139 LLENVLAEMVISAVPSIE-------------MVRFVNSGTEACMGVLRLARAF------T 179
+ S P+I+ ++ F NSG+EA ++AR +
Sbjct: 83 -------PLTQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEP 135
Query: 180 GRERIIKFEGCYHGHADPFLVKAG------------SGVATLGLPDSPGVPKGATYETLT 227
R + I YHG++ L G G + PD +P + +
Sbjct: 136 HRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYD 195
Query: 228 APFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 286
V ++ + E IAA+I+EP++ G + P D++ A++ I +++GALLI D
Sbjct: 196 LE--CVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISD 253
Query: 287 EVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVAPAGP---M 341
EV+ GF R +GV PD+ T+ K I LP+ A +++I E G
Sbjct: 254 EVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHF 313
Query: 342 YQAGTLSGNPLA 353
T GNP A
Sbjct: 314 RHVNTFGGNPAA 325
>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional.
Length = 449
Score = 87.4 bits (217), Expect = 2e-18
Identities = 88/315 (27%), Positives = 126/315 (40%), Gaps = 38/315 (12%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK--------KGTS 133
PI+ G +++DIDG + +D VG +GH ++V A+ + GT+
Sbjct: 25 PIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTT 84
Query: 134 FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKF 187
L L +M A + V F + G+++ L+LAR + R + I
Sbjct: 85 HPRAIELSYELIDMF--APEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISL 142
Query: 188 EGCYHG-HADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND----------VSAL 236
+ YHG H V + P PG T PF + L
Sbjct: 143 KQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLL 202
Query: 237 ENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294
E IAA I EPV G G I P +F +R + +G LLI DEV+TGF R
Sbjct: 203 EREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRT 262
Query: 295 AYGGAQEYFGVTPDLTTLGKIIGGG-LPVGA--YGGRRDIMEMVA----PAGPMYQAGTL 347
+GV PD+ L K I G +P+GA R I + G + T
Sbjct: 263 GSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNAR--IADAFEANADFGGAIMHGYTY 320
Query: 348 SGNPLAMTAGIHTLK 362
SG+P+A A + TL
Sbjct: 321 SGHPVACAAALATLD 335
>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional.
Length = 972
Score = 88.1 bits (219), Expect = 2e-18
Identities = 92/310 (29%), Positives = 136/310 (43%), Gaps = 46/310 (14%)
Query: 92 HMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK---GTSFGAPCLLENVLAEMV 148
H++D+ G Y+D V + ++GH ++ AA + F + E +E +
Sbjct: 578 HLFDMAGRSYLDMVNN--VTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAE--FSERL 633
Query: 149 ISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVA 207
+ P ++ V VNSG+EA +RLA A +GR ++ YHG A V+
Sbjct: 634 AALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWT-----VATDAVS 688
Query: 208 TL---------GLPD------SPGVPKGATYETLTAP--FNDVSA-LENLFENNKGEIAA 249
T PD SP +G +A DV A LE L + +G +A
Sbjct: 689 TSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRG-LAG 747
Query: 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF------ 303
I EPV GN+G IA P +L + + G + I DEV G YG YF
Sbjct: 748 FICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVG----YGRLGHYFWGFEQQ 803
Query: 304 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY-QAGTLSGNPLAMTAGIHTLK 362
GV PD+ T+ K +G G P+GA RR+I E + G + G G+P++ G+ L
Sbjct: 804 GVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSSTG---GSPVSCRIGMAVLD 860
Query: 363 RLKEPGTYEY 372
L+E E
Sbjct: 861 VLREEKLQEN 870
>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional.
Length = 466
Score = 86.3 bits (214), Expect = 4e-18
Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 42/314 (13%)
Query: 80 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCL 139
G ++ ++ +G ++ D DG Y+D +G +G+ +++ A+ + ++ +
Sbjct: 33 GSLVIVEA-EGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGD 91
Query: 140 LENV----LAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGR------ERIIKFE 188
+ N LA + P + V G+ A LR + + II
Sbjct: 92 MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRG 151
Query: 189 GCYHGHADPFLVKAGSGVAT--------------LGLPDSPGVPKGATYETLTAPFND-- 232
YHG +L + +G A L P+ P G + A F D
Sbjct: 152 DAYHGST--YLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMS----EAAFCDFL 205
Query: 233 VSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291
V E+ + + IAA I EP++G+ G I P P + +R I + L I DEV+TG
Sbjct: 206 VDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTG 265
Query: 292 F-RL-AYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVA-PAGP--MYQAG 345
F RL + ++ FG+ PD+ T K + G P+GA ++++++ P ++ G
Sbjct: 266 FGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHG 325
Query: 346 -TLSGNPLAMTAGI 358
T SG+P+A A +
Sbjct: 326 FTYSGHPVACAAAL 339
>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional.
Length = 459
Score = 85.5 bits (212), Expect = 6e-18
Identities = 79/315 (25%), Positives = 129/315 (40%), Gaps = 38/315 (12%)
Query: 84 VFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENV 143
V S +G ++ D+DG +Y+D+ G+ +G+ V+ + E M K F +P N
Sbjct: 57 VLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAK-LPF-SPRRFTNE 113
Query: 144 ----LAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF 198
AE + + V F GT A L+LAR TG +++ +HG +
Sbjct: 114 TAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDA 173
Query: 199 LVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSA--------LENLFENNKGEIAA 249
+ G G+ P GV + + F D LE + E +G I A
Sbjct: 174 ISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK-EGGIGA 232
Query: 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308
I E V N+ P + +R I ++ LLI DE+ G R + +G+ PD
Sbjct: 233 FIAEAV-RNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPD 291
Query: 309 LTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAGTLS-------GNPLAMTAGIHT 360
+ +GK +GGGL P+ A M+ A +S +PL A + T
Sbjct: 292 ILCIGKGLGGGLVPIAA---------MITKDK-YNTAAQISLGHYTHEKSPLGCAAALAT 341
Query: 361 LKRLKEPGTYEYLNK 375
++ +++ G E +
Sbjct: 342 IEVIEQEGLLEKVKA 356
>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional.
Length = 460
Score = 85.3 bits (211), Expect = 7e-18
Identities = 88/338 (26%), Positives = 141/338 (41%), Gaps = 44/338 (13%)
Query: 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA----- 136
P V +G H+WD DG Y+D + +G+ + AA M++ +
Sbjct: 37 PRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTT 96
Query: 137 -PCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFE 188
P ++E L+E++ S +P + NSG+EA ++R R + ++ +I
Sbjct: 97 HPAVIE--LSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRW 154
Query: 189 GCYHGHADPFLVKAGSGVATLG-----------LPDSPGVPKGATY----ETLTAPFNDV 233
YHG + LG +PD + + Y E A F
Sbjct: 155 NGYHG--------STLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRR 206
Query: 234 SAL---ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290
+AL E + E +A + EP G G I P + I+RI ++ LL DEV+
Sbjct: 207 AALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG 266
Query: 291 GF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG-TL 347
GF R A E+FG PD ++ K + G +P+G + I E + G ++ G T
Sbjct: 267 GFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTY 326
Query: 348 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGII 385
SG+P+A I LK L++ G + TG Q +
Sbjct: 327 SGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCL 364
>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Validated.
Length = 428
Score = 84.3 bits (209), Expect = 1e-17
Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 39/299 (13%)
Query: 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FG----APCLLENVLAEMVIS 150
DG +D + SW AI G+ Q+ AA+ + + FG P + + ++V
Sbjct: 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAI--ELCRKLVAM 98
Query: 151 AVPSIEMVRFVNSGTEACMGVLRLARAF-----TGRERIIKFEGCYHGHADPFLVKAGSG 205
+E V +SG+ A +++A + R+R + YHG D F G
Sbjct: 99 TPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHG--DTF------G 150
Query: 206 VATLGLPDSP--GVPKGATYETLTAP-----F------NDVSALENLFENNKGEIAAIIL 252
++ PD+ + KG E L AP F D++ L ++ EIAA+IL
Sbjct: 151 AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVIL 210
Query: 253 EPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 310
EP+V G G P++L +R++ G LLI DE+ TGF R A E+ G+ PD+
Sbjct: 211 EPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDIL 270
Query: 311 TLGKIIGGG-LPVGAYGGRRDIMEMVA--PAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 366
LGK + GG + + A R++ E ++ AG T GNPLA +L L+
Sbjct: 271 CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES 329
>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated.
Length = 456
Score = 83.4 bits (207), Expect = 4e-17
Identities = 89/320 (27%), Positives = 137/320 (42%), Gaps = 55/320 (17%)
Query: 89 KGSHMWDIDGNEYID-YVGSWGPAIIGHADDQVLAALGETMKK--------GTSFGAPCL 139
+G ++WD +GN+ +D G W + G+ ++ A M++ T+
Sbjct: 40 EGVYLWDSEGNKILDGMAGLWCVNV-GYGRKELADAAARQMRELPYYNTFFKTTHPPAIE 98
Query: 140 LENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHG 193
L LAE+ A P V F NSG+EA VLR+ R + ++ II + YHG
Sbjct: 99 LAAKLAEV---APPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHG 155
Query: 194 HADPFLVKAGS----------------GVATLGLPDSPGVPKGATYETLTAPFNDVSA-- 235
V S G+ + P G T E F +A
Sbjct: 156 ST----VAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEE----FGLAAARQ 207
Query: 236 LE----NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291
LE L +N +AA I EP+ G G I P + I+RI ++ LL+ DEV+ G
Sbjct: 208 LEAKILELGADN---VAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICG 264
Query: 292 F-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIME-MVAPAGPMYQAGTLS 348
F R ++FG+ PDL T+ K + G +P+GA G + E ++ G T S
Sbjct: 265 FGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYS 324
Query: 349 GNPLAMTAGIHTLKRLKEPG 368
G+P+A + L+ L++ G
Sbjct: 325 GHPVAAAVALANLRILRDEG 344
>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional.
Length = 460
Score = 78.9 bits (195), Expect = 9e-16
Identities = 78/314 (24%), Positives = 117/314 (37%), Gaps = 37/314 (11%)
Query: 79 GGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-----S 133
V +G ++WD G Y+D + +GH ++ A + S
Sbjct: 32 DAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWS 91
Query: 134 FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------TGRERIIK 186
+ P +E LAE + + P + V F G+EA +LA+ + G+ ++I
Sbjct: 92 YAHPPAIE--LAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVIS 149
Query: 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVP---------------KGATYETLTAPFN 231
YHG A +G+ P P VP G E
Sbjct: 150 RAIAYHG--TTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAA 207
Query: 232 DVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290
D +E E + +AA+ LEPV G P P + +R I LL+ DEV+
Sbjct: 208 D--RIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVIC 265
Query: 291 GF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG-TL 347
F RL E FG PD+ T K I G P+GA + E M+ G T
Sbjct: 266 AFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTF 325
Query: 348 SGNPLAMTAGIHTL 361
G+P++ + L
Sbjct: 326 GGHPVSAAVALANL 339
>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 466
Score = 79.0 bits (195), Expect = 1e-15
Identities = 80/332 (24%), Positives = 131/332 (39%), Gaps = 79/332 (23%)
Query: 89 KGSHMW--DIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENV--- 143
+G +W D +G Y+D V SW + GHA+ ++ + + + + LE+V
Sbjct: 35 RGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQ---------LEHVILA 85
Query: 144 ---------LAEMVISAVPS-IEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKF 187
L+E ++ P + + ++G+ A L+++ R ++R +
Sbjct: 86 GFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTL 145
Query: 188 EGCYHGHA----------------DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231
YHG P L+ + PD P+G ++E +
Sbjct: 146 TNSYHGETLAAMSVGDVALFTETYKPLLLD----TIKVPSPDCYLRPEGMSWEEHSR--R 199
Query: 232 DVSALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290
+ +E + EIAA+I+EP++ G G P +L +R G LI DE+
Sbjct: 200 MFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAV 259
Query: 291 GF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVAPAGPMYQA---- 344
GF R A E G+ PD L K + GG LP+ A V +YQA
Sbjct: 260 GFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAA----------VLTTDTVYQAFYDD 309
Query: 345 -GTL---------SGNPLAMTAGIHTLKRLKE 366
TL +GNPLA A + TL ++
Sbjct: 310 YPTLRAFLHSHSYTGNPLACAAALATLDIFEQ 341
>gnl|CDD|235894 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 453
Score = 75.2 bits (185), Expect = 2e-14
Identities = 83/318 (26%), Positives = 124/318 (38%), Gaps = 60/318 (18%)
Query: 88 VKGSHMW--DIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLA 145
+G W D DG Y+D + SW + GHA+ ++ AAL + + LE+ +
Sbjct: 41 ARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLD---------TLEHAML 91
Query: 146 EMVISAVPSIEMVR--------------FVNSGTEACMGVLRLA------RAFTGRERII 185
P+IE+ F + G A L+++ R + +
Sbjct: 92 AGCTHE-PAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFV 150
Query: 186 KFEGCYHGHA----------------DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 229
YHG DP L++ VA+ PD+ G G T + A
Sbjct: 151 CLANGYHGETIGALGVTDVALFKDAYDP-LIRHAHVVAS---PDARGARPGETAADVAA- 205
Query: 230 FNDVSALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288
++ + LF G+IAA+I+EP+V +G P +L +R + G LI DE+
Sbjct: 206 -RALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEI 264
Query: 289 MTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMV---APAGPMYQ 343
G R A E GV PD L K I GG LP+ R I
Sbjct: 265 AVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLH 324
Query: 344 AGTLSGNPLAMTAGIHTL 361
+ + +GNPLA A + TL
Sbjct: 325 SHSYTGNPLACRAALATL 342
>gnl|CDD|236437 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate
aminotransferase; Validated.
Length = 425
Score = 74.1 bits (183), Expect = 3e-14
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 164 GTEACMGVLRLARAFTGRERIIKFEGCYHGH--------ADPFLVKAGSGVATLGLPDSP 215
GT A L+LAR TGR I+ F +HG + + G+GV L +
Sbjct: 112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHK-RQGAGVP---LNNVT 167
Query: 216 GVPKGATYETLTAP-FNDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNA 271
+P Y+ + ++ LE L E++ + AA+I+E V G G ++L
Sbjct: 168 RMP----YDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQR 223
Query: 272 IRRITKENGALLIFDEVMTGFRLAYGGAQEYF-----GVTPDLTTLGKIIGG-GLP 321
+ ++ +++ LLI D++ G G +F G+TPD+ TL K I G GLP
Sbjct: 224 LAKLCRKHDILLIVDDIQAG----CGRTGTFFSFERAGITPDIVTLSKSISGYGLP 275
Score = 42.9 bits (102), Expect = 3e-04
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 68 VNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAAL 124
V S R+F P+VFD KGS ++D DG EYID+ G GH + + AL
Sbjct: 14 VRSYCRSF------PVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQAL 64
>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 422
Score = 72.6 bits (178), Expect = 8e-14
Identities = 82/340 (24%), Positives = 143/340 (42%), Gaps = 41/340 (12%)
Query: 75 FKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALG---ETMKKG 131
+ + G + + S G + DG+ ID + SW A GH ++ AA +TM
Sbjct: 16 YAAPGVRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSH- 74
Query: 132 TSFGAPCLLENV-LAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT------GRER 183
FG + L +++ ++ V + +SG+ + +++A ++ R R
Sbjct: 75 VMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTR 134
Query: 184 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG----VPKGATYETLTAPF--------N 231
++ + YHG D F A + + D G + KG E + AP
Sbjct: 135 LLTWRSGYHG--DTF--------AAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQ 184
Query: 232 DVSALENLFENNKGE-IAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289
++S E E +AAII+EP+V G G + +R + ++ LLI DE+
Sbjct: 185 EISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA 244
Query: 290 TGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQA 344
TGF R A GVTPD+ +GK + GG + A + ++++ G +
Sbjct: 245 TGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHG 304
Query: 345 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 384
T NPLA +L+ ++ + + +I EL G+
Sbjct: 305 PTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGL 344
>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional.
Length = 459
Score = 72.8 bits (179), Expect = 9e-14
Identities = 93/343 (27%), Positives = 143/343 (41%), Gaps = 52/343 (15%)
Query: 82 PIVFDSVKGSHMWDIDGNEYID-YVGSWGPAIIGHADDQVLAALGETMKK---GT---SF 134
V S KG+ + D G++ +D + G W +G+ + ++ A E M++ T F
Sbjct: 29 VTVLASAKGATLTDASGHQLLDAFAGLWC-VNVGYGQESIVEAAAEQMRELPYATGYFHF 87
Query: 135 GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRL------ARAFTGRERIIKFE 188
G+ + + A++ A S+ V F G++A +R A +++ I E
Sbjct: 88 GSEPAIR-LAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLE 146
Query: 189 GCYHGHADPFLVKAGSGVATL-------GLP-------DSPGV---PKGATYETLTAPFN 231
YHG + G+G+ L LP SP P G + + A
Sbjct: 147 RGYHGSS-----SVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAA-- 199
Query: 232 DVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290
V+AL + +AA EP+ G+ G I P +L A+R +E G L + DEV+T
Sbjct: 200 SVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT 259
Query: 291 GF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGA-------YGGRRDIMEMVAPAGPM 341
GF R A E GV PDL T+ K + G +P+GA Y G D AP G
Sbjct: 260 GFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHG 319
Query: 342 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 384
Y T S +P++ G+ L+ E G K G+
Sbjct: 320 Y---TYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGL 359
>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional.
Length = 460
Score = 71.6 bits (176), Expect = 2e-13
Identities = 95/371 (25%), Positives = 150/371 (40%), Gaps = 82/371 (22%)
Query: 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYID-YVGS 107
L S EA ++A L P + R + G P+V + +G +++D G YI+ G
Sbjct: 3 MLPNSLEARDIAYHLHP---YTNARRHEEEG--PLVIERGEGIYVYDDAGKRYIEGMAGL 57
Query: 108 WGPAIIGHADDQVLAALGETMKKGT---SFG----APCLLENVLAEMVISAVPSIEM--V 158
W A+ G ++ +++ A MKK +F P + LAE +++ P + M V
Sbjct: 58 WSVAL-GFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVID---LAEKLVAMAP-VPMSKV 112
Query: 159 RFVNSGTEACMGVLRL------ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212
F NSG+EA V++L A +++II + YHG V S T GLP
Sbjct: 113 FFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHG------VTIASASLT-GLP 165
Query: 213 DS--------PGV------------PKGATYETLTAPFNDVSALENLFENNKGE-IAAII 251
++ + G + E + LE L + IAA I
Sbjct: 166 NNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLAN--ELEALILAEGPDTIAAFI 223
Query: 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 310
EPV+G G I P + I+ + ++ LL+ DEV+ GF R E FG+ PD+
Sbjct: 224 GEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDIL 283
Query: 311 TLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQA--------GTL------SGNPLAMT 355
+ K + P+ A V +Y GT SG+P+A
Sbjct: 284 VMSKQLSSSYQPLSA----------VLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAA 333
Query: 356 AGIHTLKRLKE 366
+ L ++E
Sbjct: 334 VALENLAIIEE 344
>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional.
Length = 443
Score = 66.5 bits (163), Expect = 9e-12
Identities = 78/318 (24%), Positives = 119/318 (37%), Gaps = 87/318 (27%)
Query: 59 VAKELMPGGVNSPVRAFKSVGGQPIVFDSVK--GSHMWD-IDGNEYIDYVGSWGPAIIGH 115
A+ + P V+ + V G +V D + GS++ D G Y+D + + +G
Sbjct: 2 AAQRVAPDDVHEVLARHILVDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGM 61
Query: 116 ------ADDQVLAALGET-MKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNS----- 163
D + A LG + K ++ S V ++EM RFV++
Sbjct: 62 NHPALADDPEFRAELGRAALNKPSN----------------SDVYTVEMARFVDTFARVL 105
Query: 164 -------------GTEACMGVLRLA-------RAFTGRE-----RIIKFEGCYHGHA--- 195
G A L++A G + +++ G +HG +
Sbjct: 106 GDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYT 165
Query: 196 ------DPFLVKAGSGVATLGLP--DSPGVPKGATYETLTAPFNDVSALENL-------- 239
DP P D+P + E L +V ALE
Sbjct: 166 LSLTNTDPRKTAR---FPKFDWPRIDNPKLRFPLPGEDL----EEVEALEAEALAQARAA 218
Query: 240 FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG- 298
FE + +IA I EP+ G G +P+F A+R + E+ ALLIFDEV TG L G
Sbjct: 219 FERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLT--GT 276
Query: 299 --AQEYFGVTPDLTTLGK 314
A + GV PD+ GK
Sbjct: 277 AWAYQQLGVRPDIVAFGK 294
>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional.
Length = 461
Score = 65.8 bits (161), Expect = 1e-11
Identities = 88/329 (26%), Positives = 133/329 (40%), Gaps = 69/329 (20%)
Query: 89 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF------GAPCLLEN 142
+G + D G YID +G+ +V A+ E K+ + G +
Sbjct: 40 EGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASIT- 98
Query: 143 VLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFT---GR---ERIIKFEGCYHGHA 195
L++ +I P+ + V + SG++A ++L + GR ++II YHG
Sbjct: 99 -LSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHG-- 155
Query: 196 DPFLVKAGSGVAT---LGLP------DSP--------------GVPKGATYETLTAPFND 232
SGV T GL D P G + E +A
Sbjct: 156 --------SGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSA--YC 205
Query: 233 VSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291
LE L + IAA I EPV+G G + P + AI+ + K+ LLI DEV+TG
Sbjct: 206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTG 265
Query: 292 F-RL-AYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYG-------GRR--DIMEMVAPA-G 339
F RL + G+ Y G+ PDL T+ K GL AY G + D++E + G
Sbjct: 266 FGRLGSMFGSDHY-GIEPDLITVAK----GL-TSAYAPLSGSIVGEKVWDVLEQGSDEHG 319
Query: 340 PMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368
+ T SG+P+ A + L L+
Sbjct: 320 AIGHGWTYSGHPICAAAALANLDILEREN 348
>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase. Characterized members
of this protein family are L-lysine 6-transaminase, also
called lysine epsilon-aminotransferase (LAT). The
immediate product of the reaction of this enzyme on
lysine, 2-aminoadipate 6-semialdehyde, becomes
1-piperideine 6-carboxylate, or P6C. This product may be
converted subsequently to pipecolate or
alpha-aminoadipate, lysine catabolites that may be
precursors of certain seconary metabolites.
Length = 431
Score = 65.2 bits (159), Expect = 2e-11
Identities = 73/285 (25%), Positives = 106/285 (37%), Gaps = 59/285 (20%)
Query: 78 VGGQPIVFD--SVKGSHMWD-IDGNEYIDYVGSWGPAIIGH------ADDQVLAALGE-T 127
G +V D +GS + D DG Y+D + +G D A LG
Sbjct: 14 TDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAA 73
Query: 128 MKKGTSFGAPCLLENVLAEMV-----ISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 182
+ K ++ + +A V + P++ + F+ G A L+ A + R
Sbjct: 74 VNKPSN---SDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRH 130
Query: 183 ------------RIIKFEGCYHG---------HADPFLVKAGSGVATLGLP--DSPGVPK 219
+++ +HG + DP T P D P +
Sbjct: 131 NQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDP--------RKTARFPKFDWPRIDN 182
Query: 220 GATYETLTAPFND-VSALEN--------LFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 270
L AP D V ALE F +IA I EP+ G G +P+FL
Sbjct: 183 PKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLR 242
Query: 271 AIRRITKENGALLIFDEVMTGFRL-AYGGAQEYFGVTPDLTTLGK 314
A+R + E+ ALLIFDEV TG L A + GV PD+ GK
Sbjct: 243 AMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGK 287
>gnl|CDD|215526 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate
transaminase.
Length = 817
Score = 60.5 bits (147), Expect = 1e-09
Identities = 57/201 (28%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 196 DPFLVKAGSGVATLGLP---DSPGVPKGATYETLTAPFN---DVSALENLF--------- 240
DP V +G + LP S + T+E+ F+ D + L +
Sbjct: 515 DPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLD 574
Query: 241 ----ENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294
G IAA+I+EPV+ G G + P F A+ ++ + +IFDEV TG RL
Sbjct: 575 EYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRL 634
Query: 295 AYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAGTLSGN--- 350
A E G PD+ K++ GGL P+ A ++ E A GP L G+
Sbjct: 635 GVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFE--AFRGPSKLDALLHGHSYT 692
Query: 351 --PLAMTAGIHTLKRLKEPGT 369
P+ A L+ K+P T
Sbjct: 693 AHPMGCAAAAKALQWYKDPST 713
>gnl|CDD|99747 cd06454, KBL_like, KBL_like; this family belongs to the pyridoxal
phosphate (PLP)-dependent aspartate aminotransferase
superfamily (fold I). The major groups in this CD
corresponds to serine palmitoyltransferase (SPT),
5-aminolevulinate synthase (ALAS),
8-amino-7-oxononanoate synthase (AONS), and
2-amino-3-ketobutyrate CoA ligase (KBL). SPT is
responsible for the condensation of L-serine with
palmitoyl-CoA to produce 3-ketodihydrospingosine, the
reaction of the first step in sphingolipid biosynthesis.
ALAS is involved in heme biosynthesis; it catalyzes the
synthesis of 5-aminolevulinic acid from glycine and
succinyl-coenzyme A. AONS catalyses the decarboxylative
condensation of l-alanine and pimeloyl-CoA in the first
committed step of biotin biosynthesis. KBL catalyzes the
second reaction step of the metabolic degradation
pathway for threonine converting 2-amino-3-ketobutyrate,
to glycine and acetyl-CoA. The members of this CD are
widely found in all three forms of life.
Length = 349
Score = 50.3 bits (121), Expect = 1e-06
Identities = 73/349 (20%), Positives = 121/349 (34%), Gaps = 72/349 (20%)
Query: 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGLPDSP 215
R ++ ++ + F G+E + F Y A GV +TL
Sbjct: 37 GSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYA---------ANDGVLSTLAGKGDL 87
Query: 216 -------------GVPKGATYETLTAPFNDVSALENLFENNKGEIAA--IILEPVVGNSG 260
G+ + + + ND+ LE L + I+ E V G
Sbjct: 88 IISDSLNHASIIDGI-RLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDG 146
Query: 261 FIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFGVTPDLT-----TLGK 314
IAP L + + K+ GA+L DE G +G E FG D TLGK
Sbjct: 147 DIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGK 202
Query: 315 IIGGGLPVGAY-GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-EPGTYEY 372
G VG Y G +++++ + + T S P A + L+ L+ P E
Sbjct: 203 AFGA---VGGYIAGSKELIDYLRSYARGFIFST-SLPPAVAAAALAALEVLQGGPERRER 258
Query: 373 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN--FEDAKKSETTKFARF 430
L + L +G+ + G G + + +D K+ F
Sbjct: 259 LQENVRYLRRGLKELGFPVGGSPS--------------HIIPPLIGDDPAKAV-----AF 299
Query: 431 YRGMLEEGVYFAPSQFEAG--------FT-SLAHSSDDIQHTITAAEKV 470
+LE G+Y ++ + S AH+ +DI + A ++V
Sbjct: 300 SDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348
>gnl|CDD|223234 COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related
enzymes [Coenzyme metabolism].
Length = 388
Score = 49.9 bits (120), Expect = 1e-06
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 231 NDVSALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287
ND+ LE L E N I+ E V G IAP L + + ++ GALL DE
Sbjct: 153 NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDE 208
Query: 288 V-MTGFRLAYG-GAQEYFGVTPD-----LTTLGKIIGGGLPVGAY-GGRRDIMEMVAPAG 339
G G G E+FG+ P+ + TLGK +G G Y G +++ +
Sbjct: 209 AHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS---SGGYIAGSAALIDYLRNRA 265
Query: 340 PMYQAGTLSGNPLAMTAGIHTLKRLKE 366
+ T + P A + L+ L+E
Sbjct: 266 RPFIFST-ALPPAVAAAALAALRILEE 291
>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the substrate in four
kinds of reactions (1) transamination (movement of amino
groups), (2) racemization (redistribution of
enantiomers), (3) decarboxylation (removing COOH
groups), and (4) various side-chain reactions depending
on the enzyme involved. Pyridoxal phosphate (PLP)
dependent enzymes were previously classified into alpha,
beta and gamma classes, based on the chemical
characteristics (carbon atom involved) of the reaction
they catalyzed. The availability of several structures
allowed a comprehensive analysis of the evolutionary
classification of PLP dependent enzymes, and it was
found that the functional classification did not always
agree with the evolutionary history of these enzymes.
Structure and sequence analysis has revealed that the
PLP dependent enzymes can be classified into four major
groups of different evolutionary origin: aspartate
aminotransferase superfamily (fold type I), tryptophan
synthase beta superfamily (fold type II), alanine
racemase superfamily (fold type III), and D-amino acid
superfamily (fold type IV) and Glycogen phophorylase
family (fold type V).
Length = 170
Score = 46.6 bits (111), Expect = 4e-06
Identities = 37/152 (24%), Positives = 49/152 (32%), Gaps = 20/152 (13%)
Query: 153 PSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212
P + FV SGT A L + +I + AG
Sbjct: 15 PGNDKAVFVPSGTGANEAALLALL--GPGDEVIVDANGHGSRYWVAAELAG--------A 64
Query: 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 272
VP DV+ LE L K +A I++ P + G + P L I
Sbjct: 65 KPVPVPVDDAGY----GGLDVAILEEL--KAKPNVALIVITPNTTSGGVLVP----LKEI 114
Query: 273 RRITKENGALLIFDEVMTGFRLAYGGAQEYFG 304
R+I KE G LL+ D G G G
Sbjct: 115 RKIAKEYGILLLVDAASAGGASPAPGVLIPEG 146
>gnl|CDD|130881 TIGR01822, 2am3keto_CoA, 2-amino-3-ketobutyrate coenzyme A ligase.
This model represents a narrowly defined clade of animal
and bacterial (almost exclusively Proteobacterial)
2-amino-3-ketobutyrate--CoA ligase. This enzyme can act
in threonine catabolism. The closest homolog from
Bacillus subtilis, and sequences like it, may be
functionally equivalent but were not included in the
model because of difficulty in finding reports of
function [Energy metabolism, Amino acids and amines].
Length = 393
Score = 48.6 bits (116), Expect = 4e-06
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 62/242 (25%)
Query: 260 GFIAPKPDFLNAIRRITKENGALLIFDEV-MTGFRLAYG-GAQEYFGVTPDLT----TLG 313
G IAP L+ I + + AL++ DE TGF G G+ E GV + TLG
Sbjct: 184 GVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLG 239
Query: 314 KIIGGGLPVGAY-GGRRDIMEMVAP-AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT-Y 370
K +GG G + R++++E++ + P + +L P + A I L+ L+
Sbjct: 240 KALGGAS--GGFTTARKEVVELLRQRSRPYLFSNSLP--PAVVGASIKVLEMLEASNELR 295
Query: 371 EYLNKITGELTQGIIDAG---KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 427
+ L T + + AG K A H I PV + DA ++
Sbjct: 296 DRLWANTRYFRERMEAAGFDIKPADHPII---------------PVMLY-DAVLAQ---- 335
Query: 428 ARFYRGMLEEGVYFAPSQFEAGF---------------TSLAHSSDDIQHTITAAEKVLR 472
RF R +LEEG+Y GF S AH+ + + + A ++ R
Sbjct: 336 -RFARRLLEEGIYV------TGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGR 388
Query: 473 QI 474
++
Sbjct: 389 EL 390
>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase,
eukaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known eukaryotic examples of the enzyme.
The degree of sequence difference between this set and
known bacterial examples is greater than the distance
between either set the most similar enzyme with distinct
function, and so separate models are built for
prokaryotic and eukaryotic sets. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 464
Score = 48.7 bits (116), Expect = 4e-06
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 237 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296
E+L + +AAII+EP+ G PDF +R ITK++ I DEV TG
Sbjct: 242 EDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTG----- 296
Query: 297 GG------AQEYFGVT--PDLTTLGK 314
G A E++ + PD+ T K
Sbjct: 297 VGATGKFWAHEHWNLDDPPDMVTFSK 322
>gnl|CDD|235893 PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase;
Provisional.
Length = 397
Score = 47.5 bits (114), Expect = 9e-06
Identities = 67/243 (27%), Positives = 96/243 (39%), Gaps = 66/243 (27%)
Query: 260 GFIAPKPDFLNAIRRITKENGALLIFDEV-MTGFRLAYG-GAQEYFGVTP--DLT--TLG 313
G IAP L I + + AL++ D+ GF G G E+FGV D+ TLG
Sbjct: 188 GDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLG 243
Query: 314 KIIGGGLPVGAY-GGRRDIMEMVAPAGPMYQAGTLSGNPLA---MTAGIHTLKRLKEPGT 369
K +GG G Y GR+++++ + Y L N LA + A I L+ L+E
Sbjct: 244 KALGGA--SGGYTAGRKEVIDWLRQRSRPY----LFSNSLAPAIVAASIKVLELLEESDE 297
Query: 370 Y-EYLNKITGELTQGIIDAG---KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 425
+ L + +G+ AG H I I M G DAK +
Sbjct: 298 LRDRLWENARYFREGMTAAGFTLGPGEHPI----IPVMLG------------DAKLA--- 338
Query: 426 KFARFYRGMLEEGVYFAPSQFEAGFT---------------SLAHSSDDIQHTITAAEKV 470
F +LEEGVY GF+ S AH+ + + I A EKV
Sbjct: 339 --QEFADRLLEEGVYVI------GFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKV 390
Query: 471 LRQ 473
++
Sbjct: 391 GKE 393
>gnl|CDD|129937 TIGR00858, bioF, 8-amino-7-oxononanoate synthase.
7-keto-8-aminopelargonic acid synthetase is an alternate
name. This model represents 8-amino-7-oxononanoate
synthase, the BioF protein of biotin biosynthesis. This
model is based on a careful phylogenetic analysis to
separate members of this family from
2-amino-3-ketobutyrate and other related pyridoxal
phosphate-dependent enzymes. In several species,
including Staphylococcus and Coxiella, a candidate
8-amino-7-oxononanoate synthase is confirmed by location
in the midst of a biotin biosynthesis operon but scores
below the trusted cutoff of this model [Biosynthesis of
cofactors, prosthetic groups, and carriers, Biotin].
Length = 360
Score = 44.2 bits (105), Expect = 1e-04
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 229 PFNDVSALENLFENNKGEIAAIIL-EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287
NDV LE L E N+GE +I+ + V G IAP L + + + GA L+ D+
Sbjct: 128 RHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDD 183
Query: 288 VM-TGFRLAYG-GAQEYFGVTPD-----LTTLGKIIGGGLPVGAY 325
TG G G E+FG+ P+ + TL K +G GAY
Sbjct: 184 AHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS---YGAY 225
>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II.
Length = 357
Score = 43.5 bits (103), Expect = 2e-04
Identities = 46/253 (18%), Positives = 77/253 (30%), Gaps = 40/253 (15%)
Query: 231 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290
D ALE + ++ +G +A + L + + KE+ LL+ DE
Sbjct: 127 LDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEE-LEKLLDLAKEHNILLLVDEAYA 185
Query: 291 GFRLAYGGAQEY---FGVTPD-----LTTLGKIIG-GGLPVGAYGGRRDIME-MVAPAGP 340
GF +G + + + K G G VG G ++ + A P
Sbjct: 186 GF--VFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAVISQLRKLARP 243
Query: 341 MYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399
Y + A A L E + + + L G+ AG
Sbjct: 244 FY--SSTHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAGLS-----VLPS 296
Query: 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVY-FAPSQFEAG----FTSL 453
+G F T + +LEE GVY S F T
Sbjct: 297 QAGF--FLLTGLDPEAALA-----------LAQVLLEEVGVYVTPGSSFGGPGWLRITVA 343
Query: 454 AHSSDDIQHTITA 466
+ ++++ + A
Sbjct: 344 GGTEEELEELLEA 356
>gnl|CDD|216367 pfam01212, Beta_elim_lyase, Beta-eliminating lyase.
Length = 288
Score = 31.8 bits (73), Expect = 0.71
Identities = 40/149 (26%), Positives = 53/149 (35%), Gaps = 29/149 (19%)
Query: 232 DVSALENLFE----NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287
D+ LE + I LE ++G + L IR I +E+G L D
Sbjct: 110 DLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAIAREHGIPLHLD- 168
Query: 288 VMTGFRLAYGGAQEYFGVTP-------DLTTLGKIIGGGLPVGAY-GGRRD-IMEMVAP- 337
G RLA A GV D ++ G G PVG+ G D I
Sbjct: 169 ---GARLAN--AAVALGVIVKEITSYADSVSMSLSKGLGAPVGSVLAGSDDFIAYARRQR 223
Query: 338 ---AGPMYQAGTLSGNPLAMTAGIHTLKR 363
G M QAG L+ AG+ L+
Sbjct: 224 KYLGGGMRQAGVLA------AAGLRALEE 246
>gnl|CDD|178417 PLN02822, PLN02822, serine palmitoyltransferase.
Length = 481
Score = 32.0 bits (73), Expect = 0.79
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 231 NDVSALENLFEN-NKGEIAA------IILEPVVGNSGFIAPKPDFLNAIRRITKENGALL 283
ND+ +L N E I++E + NSG IAP L+ I R+ ++ +
Sbjct: 223 NDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRV 278
Query: 284 IFDEVMT-GFRLAYG-GAQEYFGVTPD 308
+ DE + G G G E+FGV +
Sbjct: 279 LLDESNSFGVLGKSGRGLSEHFGVPIE 305
>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal
phosphate combines with an alpha-amino acid to form a
compound called a Schiff base or aldimine intermediate,
which depending on the reaction, is the substrate in
four kinds of reactions (1) transamination (movement of
amino groups), (2) racemization (redistribution of
enantiomers), (3) decarboxylation (removing COOH
groups), and (4) various side-chain reactions depending
on the enzyme involved. Pyridoxal phosphate (PLP)
dependent enzymes were previously classified into alpha,
beta and gamma classes, based on the chemical
characteristics (carbon atom involved) of the reaction
they catalyzed. The availability of several structures
allowed a comprehensive analysis of the evolutionary
classification of PLP dependent enzymes, and it was
found that the functional classification did not always
agree with the evolutionary history of these enzymes.
The major groups in this CD corresponds to Aspartate
aminotransferase a, b and c, Tyrosine, Alanine,
Aromatic-amino-acid, Glutamine phenylpyruvate,
1-Aminocyclopropane-1-carboxylate synthase,
Histidinol-phosphate, gene products of malY and cobC,
Valine-pyruvate aminotransferase and Rhizopine
catabolism regulatory protein.
Length = 350
Score = 31.5 bits (72), Expect = 0.85
Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 32/179 (17%)
Query: 220 GATYET--LTAPFNDVSALENLFENNKGEIAAIILEPVVGNS-----GFIAPKPDFLNAI 272
GA L + LE L + + L N+ G + + + L +
Sbjct: 104 GAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYL-----NNPNNPTGAVLSE-EELEEL 157
Query: 273 RRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPD-------LTTLGKIIG-GGLPVG- 323
+ K++G L+I DE Y G D L + K G GL +G
Sbjct: 158 AELAKKHGILIISDEAYAEL--VYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGY 215
Query: 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 382
+++E + T SG A L + E+L ++ +
Sbjct: 216 LIAPPEELLERLK----KLLPYTTSGPSTLSQAAAAAA--LDDGE--EHLEELRERYRR 266
>gnl|CDD|235655 PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.
Length = 385
Score = 30.1 bits (69), Expect = 2.6
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 28/112 (25%)
Query: 228 APFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287
P NDV ALE L + A I+ E V G +AP L + + + +GA L+ DE
Sbjct: 150 YPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDE 205
Query: 288 VMTGFRLAYG---------GAQEYFGVT--PD---LTTLGKIIGGGLPVGAY 325
A+G G G+ PD + TLGK +G GA
Sbjct: 206 -------AHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGS---SGAA 247
>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional.
Length = 380
Score = 30.1 bits (68), Expect = 2.8
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 269 LNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPD----LTTLGKIIG-GGLPVG 323
+ I ++N A L+ D F + A EY P+ + KI G GL +G
Sbjct: 179 IKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEY---APEHTVTSYSFSKIFGMAGLRIG 235
Query: 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 362
A D++E+V L N +A A I LK
Sbjct: 236 AVVATPDLIEVVK----SIVINDLGTNVIAQEAAIAGLK 270
>gnl|CDD|130046 TIGR00973, leuA_bact, 2-isopropylmalate synthase, bacterial type.
This is the first enzyme of leucine biosynthesis. A
larger family of homologous proteins includes
homocitrate synthase, distinct lineages of
2-isopropylmalate synthase, several distinct,
uncharacterized, orthologous sets in the Archaea, and
other related enzymes. This model describes a family of
2-isopropylmalate synthases found primarily in Bacteria.
The homologous families in the Archaea may represent
isozymes and/or related enzymes [Amino acid
biosynthesis, Pyruvate family].
Length = 494
Score = 29.7 bits (67), Expect = 3.7
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Query: 350 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409
N A +GIH LK TYE ++ LT + GK +G + + GF
Sbjct: 288 NAFAHESGIHQDGVLKNKETYEIMSPEDIGLTAEQLVLGKHSGRHAFKDRLEEL-GFKLD 346
Query: 410 EGPVYNFEDAKKSETTK 426
+ + + K K
Sbjct: 347 DEELDKLFEKFKELADK 363
>gnl|CDD|183085 PRK11316, PRK11316, bifunctional heptose 7-phosphate kinase/heptose
1-phosphate adenyltransferase; Provisional.
Length = 473
Score = 29.4 bits (67), Expect = 4.1
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 116 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVI-----SAVPSIEMVRFVNSGTEACMG 170
A D V++ L + G S C L N A +V+ S V IE+ + E G
Sbjct: 262 AGDTVISVLAAALAAGNSLEEACALANAAAGVVVGKLGTSTVSPIELENALRGRAETGFG 321
Query: 171 VL---------RLARAFTGR-ERIIKFEGCY---H-GH 194
V+ ARA R E+I+ GC+ H GH
Sbjct: 322 VMSEEQLKLAVAQARA---RGEKIVMTNGCFDILHAGH 356
>gnl|CDD|234060 TIGR02919, TIGR02919, accessory Sec system glycosyltransferase
GtfB. Members of this protein family are found only in
Gram-positive bacteria of the Firmicutes lineage,
including several species of Staphylococcus,
Streptococcus, and Lactobacillus [Protein fate, Protein
modification and repair].
Length = 438
Score = 29.2 bits (66), Expect = 5.2
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 64 MPGGVNSPVR---AFKSVGGQPIVFDSVKGSHMWDIDGN 99
+P V SP R ++ G+P+ F+ V W+I GN
Sbjct: 37 LPDDVLSPYRFFTGYEDTNGKPLYFNEVPVPDFWEIKGN 75
>gnl|CDD|145542 pfam02456, Adeno_IVa2, Adenovirus IVa2 protein. IVa2 protein can
interact with the adenoviral packaging signal and that
this interaction involves DNA sequences that have
previously been demonstrated to be required for
packaging. During the course of lytic infection, the
adenovirus major late promoter (MLP) is induced to high
levels after replication of viral DNA has started. IVa2
is a transcriptional activator of the major late
promoter.
Length = 370
Score = 28.5 bits (64), Expect = 8.7
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 222 TYETLTAPFN-DVSALENLFEN--NKGEIAAIILE 253
TYE T+P N DV+ N+F G IA I+ E
Sbjct: 170 TYEDATSPENLDVNHPNNIFVQAAKNGPIAIIMDE 204
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.318 0.137 0.400
Gapped
Lambda K H
0.267 0.0698 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 24,900,863
Number of extensions: 2538485
Number of successful extensions: 2557
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2285
Number of HSP's successfully gapped: 139
Length of query: 474
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 374
Effective length of database: 6,502,202
Effective search space: 2431823548
Effective search space used: 2431823548
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (27.3 bits)