Query 011960
Match_columns 474
No_of_seqs 217 out of 1224
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 18:49:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 3.3E-83 1.1E-87 660.8 17.7 375 1-465 1-434 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 1.2E-82 4.2E-87 655.6 18.7 375 1-465 1-424 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 9.2E-77 3.1E-81 619.4 21.2 375 1-465 2-437 (475)
4 2btq_B Tubulin btubb; structur 100.0 9.7E-76 3.3E-80 607.1 17.1 374 1-465 1-424 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 2.4E-73 8.3E-78 594.6 16.9 371 1-465 3-429 (473)
6 1w5f_A Cell division protein F 99.9 1.6E-26 5.3E-31 232.6 9.6 152 168-351 85-239 (353)
7 1rq2_A Cell division protein F 99.9 4E-26 1.4E-30 231.2 10.1 151 168-350 75-226 (382)
8 2vap_A FTSZ, cell division pro 99.9 5.6E-26 1.9E-30 229.0 10.5 144 181-351 108-252 (364)
9 1ofu_A FTSZ, cell division pro 99.9 7.4E-26 2.5E-30 225.6 10.4 151 168-350 75-226 (320)
10 2vxy_A FTSZ, cell division pro 99.9 1.8E-25 6E-30 226.5 10.7 152 168-351 75-227 (382)
11 2vaw_A FTSZ, cell division pro 99.9 3.4E-25 1.2E-29 225.3 10.6 151 168-350 75-226 (394)
12 2r75_1 Cell division protein F 99.9 6.6E-25 2.3E-29 220.1 7.9 149 170-350 73-222 (338)
13 3m89_A FTSZ/tubulin-related pr 99.9 5.3E-22 1.8E-26 200.5 9.8 226 4-347 45-300 (427)
14 3v3t_A Cell division GTPase FT 99.8 2.7E-20 9.4E-25 184.8 10.4 143 167-346 63-212 (360)
15 4dxd_A Cell division protein F 99.8 4.5E-20 1.5E-24 185.1 7.6 149 167-346 80-229 (396)
16 4ei7_A Plasmid replication pro 98.3 1.2E-06 4.2E-11 89.1 9.1 155 168-347 87-249 (389)
17 3r4v_A Putative uncharacterize 93.1 0.32 1.1E-05 46.8 8.8 113 182-316 68-181 (315)
18 2e4h_B Tubulin alpha-ubiquitou 89.2 0.12 4.2E-06 33.6 1.1 19 447-465 1-19 (36)
19 3lfh_A Manxa, phosphotransfera 75.6 3.5 0.00012 35.4 5.1 39 181-219 43-83 (144)
20 3bed_A PTS system, IIA compone 75.5 2.4 8.2E-05 36.2 4.0 38 181-219 45-83 (142)
21 1pdo_A Mannose permease; phosp 73.7 4.6 0.00016 34.0 5.4 39 181-219 41-80 (135)
22 3ipr_A PTS system, IIA compone 73.6 2.6 8.8E-05 36.4 3.7 42 181-222 41-83 (150)
23 3gx1_A LIN1832 protein; APC633 68.1 8.3 0.00029 32.3 5.6 39 180-220 43-82 (130)
24 3mtq_A Putative phosphoenolpyr 65.4 3.3 0.00011 36.2 2.6 38 182-219 61-99 (159)
25 3gdw_A Sigma-54 interaction do 60.8 12 0.0004 31.8 5.2 39 180-220 43-84 (139)
26 3b48_A Uncharacterized protein 54.1 4.9 0.00017 33.9 1.7 30 181-211 47-76 (135)
27 3ct6_A PTS-dependent dihydroxy 37.2 15 0.00053 30.7 2.1 29 181-211 42-70 (131)
28 2dpr_A CON-T(K7GLA); conantoxi 35.0 24 0.00082 20.1 1.9 14 446-459 2-15 (26)
29 3f1i_H Hepatocyte growth facto 33.1 13 0.00044 29.3 0.9 54 407-465 30-90 (98)
30 4a25_A DPS, ferritin DPS famil 21.5 77 0.0026 27.5 3.9 50 405-457 17-66 (169)
31 2aot_A HMT, histamine N-methyl 20.9 1.8E+02 0.0061 26.9 6.7 57 184-240 36-92 (292)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=3.3e-83 Score=660.77 Aligned_cols=375 Identities=18% Similarity=0.253 Sum_probs=321.5
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCcccc--cccccccccccccccCCCceeeeeeeeeeccccc-cc
Q 011960 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFR--NQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LG 77 (474)
Q Consensus 1 MrEIItlq~Gq~gN~IG~hfWn~q~~~~~~~~~~~~~~~~~--~~~~~~~v~Fr~g~t~~g~~~y~PR~llvDl~~~-~~ 77 (474)
|||||+||+||||||||..||++++.||+++++|....+.. ..+...++||+ |+.+| +|+||||+|||||+ ++
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~--e~~~g--k~vPRavlvDlEp~vid 76 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFS--ETGAG--KHVPRAVFVDLEPTVID 76 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEE--ECTTS--CEEESEEEEESSSHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcc--cCCCC--ccccceeeecCCcchhh
Confidence 99999999999999999999999999999999987644321 13457899999 67777 99999999999999 66
Q ss_pred cccccccccCCCCCCCCCccccCCceeEEecCCCccchHhHhhhhhcccccccccCCCCCCCCcccccccccccchhcCC
Q 011960 78 SMSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDISLYELGG 157 (474)
Q Consensus 78 sl~~~g~ly~~~~~~~~~~~~w~g~v~~~~~~~~~k~~y~~~L~~~~~~~~~~~~~~~~~~~n~a~~~~~~~~s~~~l~~ 157 (474)
+++ +++ +++||++++ ++.|++++|||||+
T Consensus 77 ~v~---------------------------~g~------~~~lf~p~~----~i~gk~gAgNNwA~-------------- 105 (451)
T 3ryc_A 77 EVR---------------------------TGT------YRQLFHPEQ----LITGKEDAANNYAR-------------- 105 (451)
T ss_dssp HHH---------------------------HST------TTTTSCGGG----EEECSSCCTTCHHH--------------
T ss_pred eee---------------------------ecc------cccccCHHH----eeeccccccCCCCe--------------
Confidence 664 466 788999999 99999999999999
Q ss_pred CCCCCCccccccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeee
Q 011960 158 LWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAV 236 (474)
Q Consensus 158 ~~~~~~~f~~~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v 236 (474)
|+|+.|+++ .|+++|+||+++|+||+||||+++||++||| ||+|+.++|.|+|||||+++++|+|
T Consensus 106 --------G~yt~G~e~------~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~~v 171 (451)
T 3ryc_A 106 --------GHYTIGKEI------IDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI 171 (451)
T ss_dssp --------HHHTSHHHH------HHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred --------eecccchHh------HHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcceEEEEEE
Confidence 999999998 8999999999999999999999999999999 9999999999999999999999999
Q ss_pred cCCCccccchhhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcC
Q 011960 237 RSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRM 316 (474)
Q Consensus 237 ~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~ 316 (474)
+|++ ..++.+++|||++|++++|.+++|++++++|++|++ +|.+.+++..++|.++|.|||++|+++|.++||
T Consensus 172 ~P~~------~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~-ic~~~l~i~~p~y~~lN~lIa~~~s~iT~slRf 244 (451)
T 3ryc_A 172 YPAP------QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD-ICRRNLDIERPTYTNLNRLISQIVSSITASLRF 244 (451)
T ss_dssp ECCT------TTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHH-HHHHHHCCSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCC------CcccccceehHHHHHHHHHHhcccceeEeccHHHHH-HHHHhccCCCCCchhhHHHHHhccccccccccc
Confidence 9987 567899999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccChhhHhhccccccccceeeccccCCCCCCCCch----hhHHHHHhcc-------CCCCCCCcC-
Q 011960 317 EPVGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPALNGK----QHEQSLLGNL-------QPLTPELLN- 384 (474)
Q Consensus 317 ~~~g~~~~~~~~~~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~~~----~~~~~l~~~~-------~~~tp~~~~- 384 (474)
+ |. .|+||.+|..+|+|+||.|| .++.+.|+.+.... -....+.+++ ....|....
T Consensus 245 ~--G~--------lN~Dl~~l~tnLVP~PrlHF--~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky 312 (451)
T 3ryc_A 245 D--GA--------LNVDLTEFQTNLVPYPRIHF--PLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312 (451)
T ss_dssp T--CS--------SSCSHHHHHHHHCSSSSCCC--CEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCE
T ss_pred C--cc--------cccCHHHHhhccCCCCceee--eccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCch
Confidence 8 65 78999999999999999999 34445555433211 1122333221 111111111
Q ss_pred ----------------------------CCcccCCCCCc-cceeccCc--------------eeeeecchhhHHHHHHHH
Q 011960 385 ----------------------------SPFVGSSPRGS-LEVHSIPM--------------AVRLRSSSAILPFLENRL 421 (474)
Q Consensus 385 ----------------------------~~~~~~~~~~~-~~~~sip~--------------~~~L~n~t~i~~~~~~~~ 421 (474)
..|..|.|.+. .+++.+|+ +++|+|+|+|+++|+++.
T Consensus 313 ~a~~~~~RG~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~ 392 (451)
T 3ryc_A 313 MACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 392 (451)
T ss_dssp EEEEEEEEESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHH
T ss_pred heehhhcccCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHH
Confidence 15667777765 67777765 357999999999999999
Q ss_pred HHHhchhhhccccccceeeccCCChhhHHHHHHHHHHHHhcccC
Q 011960 422 GNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 465 (474)
Q Consensus 422 ~~f~~l~~rr~~~~~~~y~~~G~~~~ef~E~~e~l~~l~~~Y~~ 465 (474)
++|++|+.||+|+ |||+++|||++||.||+|+|++|+++|++
T Consensus 393 ~kFd~m~~krAFv--HwY~~eGmee~eF~EA~e~l~~L~~eY~~ 434 (451)
T 3ryc_A 393 HKFDLMYAKRAFV--HWYVGEGMEEGEFSEAREDMAALEKDYEE 434 (451)
T ss_dssp HHHHHHHTTTTTT--HHHHTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcceeH--hhhcCCccchhhHHHHHHHHHHHHHHHHH
Confidence 9999998888766 99999999999999999999999999985
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=1.2e-82 Score=655.56 Aligned_cols=375 Identities=20% Similarity=0.282 Sum_probs=324.1
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCcccccccccccccccccccCCCceeeeeeeeeeccccc-cccc
Q 011960 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSM 79 (474)
Q Consensus 1 MrEIItlq~Gq~gN~IG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~Fr~g~t~~g~~~y~PR~llvDl~~~-~~sl 79 (474)
|||||+||+||||||||..||++++.||+++++|....+........++||+ |+.+| +|+||+|+|||||+ ++++
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~fF~--e~~~~--~~vpRavlvDlEp~vid~i 76 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYN--EATGN--KYVPRAILVDLEPGTMDSV 76 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTHHHHTGGGTEE--ECSTT--BEEECEEEEESSSHHHHHH
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccccccchhhccc--cCCCC--ccccceeEecCCchhhhhh
Confidence 9999999999999999999999999999999998764433223457899999 67777 99999999999999 6666
Q ss_pred cccccccCCCCCCCCCccccCCceeEEecCCCccchHhHhhhhhcccccccccCCCCCCCCcccccccccccchhcCCCC
Q 011960 80 SSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDISLYELGGLW 159 (474)
Q Consensus 80 ~~~g~ly~~~~~~~~~~~~w~g~v~~~~~~~~~k~~y~~~L~~~~~~~~~~~~~~~~~~~n~a~~~~~~~~s~~~l~~~~ 159 (474)
+ +++ +++||++++ ++.|++|+|||||+
T Consensus 77 ~---------------------------~g~------~~~lf~p~~----~i~g~~gAgNN~A~---------------- 103 (445)
T 3ryc_B 77 R---------------------------SGP------FGQIFRPDN----FVFGQSGAGNNWAK---------------- 103 (445)
T ss_dssp H---------------------------TST------TGGGSCGGG----EEECSSCCTTCHHH----------------
T ss_pred h---------------------------ccc------ccceecccc----eEEccccccCCccc----------------
Confidence 4 466 788999999 99999999999999
Q ss_pred CCCCccccccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecC
Q 011960 160 MDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRS 238 (474)
Q Consensus 160 ~~~~~f~~~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p 238 (474)
|+|+.|+++ .|+++|+||+++|+||+||||+++||++||| ||+|+.++|.|+|||||+.+++|+|+|
T Consensus 104 ------G~yt~G~e~------~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~sV~P 171 (445)
T 3ryc_B 104 ------GHYTEGAEL------VDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMP 171 (445)
T ss_dssp ------HHHSHHHHH------HHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSEEEEEEEEC
T ss_pred ------cchhhhHHH------HHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcCccccceEEEEe
Confidence 999999998 9999999999999999999999999999999 999999999999999999999999999
Q ss_pred CCccccchhhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCC
Q 011960 239 PSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEP 318 (474)
Q Consensus 239 ~~~~~~~~~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~ 318 (474)
.+ ..++.+++|||++|++++|.+++|++++++|++|++ +|.+.+++..++|.++|.|||++|+++|.++||+
T Consensus 172 sp------~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~-ic~~~l~i~~p~y~~lN~lIa~~~s~iT~slRf~- 243 (445)
T 3ryc_B 172 SP------KVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYD-ICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP- 243 (445)
T ss_dssp CG------GGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHH-HHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHSC-
T ss_pred CC------ccccccccchhhhhhHhhhhcccceeEeecchhHHH-HHHhccCCCCCcchhhHHHHHhcchhhccccccC-
Confidence 87 567899999999999999999999999999999999 8999999999999999999999999999999998
Q ss_pred CCCCCCcccccCccChhhHhhccccccccceeeccccCCCCCCCCch----hhHHHHHhcc-------CCCCCCCcC---
Q 011960 319 VGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPALNGK----QHEQSLLGNL-------QPLTPELLN--- 384 (474)
Q Consensus 319 ~g~~~~~~~~~~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~~~----~~~~~l~~~~-------~~~tp~~~~--- 384 (474)
|. .|+||.+|..+|+|+||.|| .++.+.|+.+.... -....+++++ ....|....
T Consensus 244 -G~--------lN~Dl~~l~tnLVP~PrlhF--~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a 312 (445)
T 3ryc_B 244 -GQ--------LNADLRKLAVNMVPFPRLHF--FMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLT 312 (445)
T ss_dssp -CS--------SSCSHHHHHHHHCSSTTCCE--EEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEE
T ss_pred -cc--------cccCHHHHhhcccCCCceee--eccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCccee
Confidence 65 78999999999999999999 33344555332111 1112233221 111121111
Q ss_pred --------------------------CCcccCCCCCc-cceeccCc------eeeeecchhhHHHHHHHHHHHhchhhhc
Q 011960 385 --------------------------SPFVGSSPRGS-LEVHSIPM------AVRLRSSSAILPFLENRLGNLRRYGLQR 431 (474)
Q Consensus 385 --------------------------~~~~~~~~~~~-~~~~sip~------~~~L~n~t~i~~~~~~~~~~f~~l~~rr 431 (474)
..|+.|.|.+. ++++.+|+ +++|+|+|+|+++|+++.++|++|+.||
T Consensus 313 ~~~~~RG~v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~~~s~~~lsNsTaI~~~~~rl~~kFd~m~~kr 392 (445)
T 3ryc_B 313 VATIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRK 392 (445)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTCSEEEEEEEEEGGGHHHHHHHHHHHHHHHTTT
T ss_pred eeeeeecCCChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCcccceeeeeecCcHHHHHHHHHHHHHHHhhhhcc
Confidence 14667777776 78888886 5689999999999999999999998888
Q ss_pred cccccceeeccCCChhhHHHHHHHHHHHHhcccC
Q 011960 432 GALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 465 (474)
Q Consensus 432 ~~~~~~~y~~~G~~~~ef~E~~e~l~~l~~~Y~~ 465 (474)
+++ |||+++|||++||.||+++|++|+++|++
T Consensus 393 AFv--HwY~~eGmee~eF~EA~e~l~~L~~eY~~ 424 (445)
T 3ryc_B 393 AFL--HWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 (445)
T ss_dssp TTT--HHHHTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cch--hhhhccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 866 99999999999999999999999999974
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=9.2e-77 Score=619.41 Aligned_cols=375 Identities=18% Similarity=0.287 Sum_probs=313.7
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCcccccccccccccccccccCCCceeeeeeeeeeccccc-cccc
Q 011960 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSM 79 (474)
Q Consensus 1 MrEIItlq~Gq~gN~IG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~Fr~g~t~~g~~~y~PR~llvDl~~~-~~sl 79 (474)
||||||||+||||||||+||||+++.||++++++...+....+..+++|||+ |+.+| +|+||+|+|||||+ ++.+
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~~~~~~~~vfF~--e~~~~--~yvPRavlvDLEp~vid~i 77 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFY--QADDE--HYIPRAVLLDLEPRVIHSI 77 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEE--ECTTS--CEEECEEEEESSSHHHHHH
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCcccccccccceeee--ecCCC--ceecceeEecCCcceeeee
Confidence 8999999999999999999999999999999998654322223568899999 56666 99999999999999 5555
Q ss_pred cccccccCCCCCCCCCccccCCceeEEecCCCccchHhHhhhhhcccccccccCCC--CCCCCcccccccccccchhcCC
Q 011960 80 SSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTS--SGKSDSQREIQDKDISLYELGG 157 (474)
Q Consensus 80 ~~~g~ly~~~~~~~~~~~~w~g~v~~~~~~~~~k~~y~~~L~~~~~~~~~~~~~~~--~~~~n~a~~~~~~~~s~~~l~~ 157 (474)
+ +++ ++.||++++ ++.|++ |+||||++
T Consensus 78 ~---------------------------~~~------~~~lf~p~~----~i~g~~g~gAgnn~a~-------------- 106 (475)
T 3cb2_A 78 L---------------------------NSP------YAKLYNPEN----IYLSEHGGGAGNNWAS-------------- 106 (475)
T ss_dssp H---------------------------HST------TTTTSCGGG----EEECCTTCCCTTCHHH--------------
T ss_pred c---------------------------ccc------ccccCCccc----eeecccccCCCCCchh--------------
Confidence 3 455 688999998 999887 78999998
Q ss_pred CCCCCCccccccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeee
Q 011960 158 LWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAV 236 (474)
Q Consensus 158 ~~~~~~~f~~~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v 236 (474)
| |+.|.+. .|+++|+||+++|+||+||||+|+|+++||| ||+|+.++|.|+||||++.+++|+|
T Consensus 107 --------G-~~~g~e~------~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~~lt~~V 171 (475)
T 3cb2_A 107 --------G-FSQGEKI------HEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSV 171 (475)
T ss_dssp --------H-HHHHHHH------HHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred --------h-hhhhHhh------HHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHHcCCCceEEEEE
Confidence 5 6788877 8999999999999999999999999999999 9999999999999999999999999
Q ss_pred cCCCccccchhhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcC
Q 011960 237 RSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRM 316 (474)
Q Consensus 237 ~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~ 316 (474)
+|... ..++.++++||++|++++|.+++|++||++|++|++ +|.+.+.+..+.+.++|++||++|+++|.++||
T Consensus 172 ~P~~~-----e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~-i~~~~l~i~~p~f~~~N~lia~~vs~iT~~lr~ 245 (475)
T 3cb2_A 172 FPNQD-----EMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNR-IATDRLHIQNPSFSQINQLVSTIMSASTTTLRY 245 (475)
T ss_dssp ECCTT-----SCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHH-HHHHTSCCSSCCHHHHHHHHHHHHHHHTTTTSS
T ss_pred ECCcc-----ccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHH-HHhhcCCCCcchHHHHHHHHhhhcccccccccc
Confidence 99761 146788999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccChhhHhhccccccccceeeccccCCCCCCCCc---------hhhHHHHHh---ccCCCCCC---
Q 011960 317 EPVGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPALNG---------KQHEQSLLG---NLQPLTPE--- 381 (474)
Q Consensus 317 ~~~g~~~~~~~~~~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~~---------~~~~~~l~~---~~~~~tp~--- 381 (474)
+ |. .|+|+.+|..+|+|+||.||+ ++.++|+.+... .++...+.+ .+....|.
T Consensus 246 p--G~--------lN~Dl~d~~tnLvP~PrlhFl--~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~ 313 (475)
T 3cb2_A 246 P--GY--------MNNDLIGLIASLIPTPRLHFL--MTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQT 313 (475)
T ss_dssp S--SC--------TTCSHHHHHHHHCSSTTCCEE--EEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--C
T ss_pred C--Cc--------ccchhhhhcceeecccceeEe--ecccccccccccccccccCCHHHHHHHHhccccceEecCccccc
Confidence 8 65 789999999999999999993 334555433211 122222222 11112222
Q ss_pred CcC-----------------------------CCcccCCCCCc-cceeccCc---------eeeeecchhhHHHHHHHHH
Q 011960 382 LLN-----------------------------SPFVGSSPRGS-LEVHSIPM---------AVRLRSSSAILPFLENRLG 422 (474)
Q Consensus 382 ~~~-----------------------------~~~~~~~~~~~-~~~~sip~---------~~~L~n~t~i~~~~~~~~~ 422 (474)
... ..|+.|.|.+. .+++.+|+ +++|+|+|+|+++|+++.+
T Consensus 314 ~gkyla~~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~~~~s~~~lsN~TaI~~~f~ri~~ 393 (475)
T 3cb2_A 314 NHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCR 393 (475)
T ss_dssp CCCEEEEEEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC-----CCEEEEEEEEGGGHHHHHHHHH
T ss_pred ccchhhhHHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCCcceEEEEecCChHHHHHHHHHHH
Confidence 111 15666766665 67777764 4579999999999999999
Q ss_pred HHhchhhhccccccceeeccCCCh---hhHHHHHHHHHHHHhcccC
Q 011960 423 NLRRYGLQRGALGAELLRNWGFAD---DELYDMGEMLSKMVSTMKP 465 (474)
Q Consensus 423 ~f~~l~~rr~~~~~~~y~~~G~~~---~ef~E~~e~l~~l~~~Y~~ 465 (474)
+|++|+.||+++ |||+++||++ +||.||+++|++|+++|++
T Consensus 394 kfd~m~~rrAfl--HwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~ 437 (475)
T 3cb2_A 394 QYDKLRKREAFL--EQFRKEDMFKDNFDEMDTSREIVQQLIDEYHA 437 (475)
T ss_dssp HHHHHHHTTCSC--HHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccce--eeecccCccccchhHHHHHHHHHHHHHHHHHH
Confidence 999998787766 9999999987 9999999999999999985
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=9.7e-76 Score=607.14 Aligned_cols=374 Identities=16% Similarity=0.234 Sum_probs=304.8
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccc-ccccccccccccccccCCCceeeeeeeeeeccccc-ccc
Q 011960 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVF-RNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGS 78 (474)
Q Consensus 1 MrEIItlq~Gq~gN~IG~hfWn~q~~~~~~~~~~~~~~~~-~~~~~~~~v~Fr~g~t~~g~~~y~PR~llvDl~~~-~~s 78 (474)
||||||||+||||||||+||||+++.||++++++...++. .....+++|||+ ++.+| +|+||+|+||+|++ +++
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~~~~~~~~~~fF~--e~~~~--~yvPRav~vDle~~~l~~ 76 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSNAAANSNMEVFFH--KVRDG--KYVPRAVLVDLEPGVIAR 76 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC-------CCCTTTEE--EEETT--EEEECEEEEEECC-----
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCcccccccccccceee--ecCCC--ceeeeeEEEecCcccccc
Confidence 9999999999999999999999999999999998754322 123467899999 44566 99999999999998 666
Q ss_pred ccccccccCCCCCCCCCccccCCceeEEecCCCccchHhHhhhhhcccccccccCCCCCCCCcccccccccccchhcCCC
Q 011960 79 MSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDISLYELGGL 158 (474)
Q Consensus 79 l~~~g~ly~~~~~~~~~~~~w~g~v~~~~~~~~~k~~y~~~L~~~~~~~~~~~~~~~~~~~n~a~~~~~~~~s~~~l~~~ 158 (474)
++ .++ ++.||++++ ++.|+.|+||||++
T Consensus 77 i~---------------------------~~~------~~~lf~p~~----i~~g~~gAgnn~a~--------------- 104 (426)
T 2btq_B 77 IE---------------------------GGD------MSQLFDESS----IVRKIPGAANNWAR--------------- 104 (426)
T ss_dssp ----------------------------------------CCCCTTS----EEECCSCCTTCHHH---------------
T ss_pred cc---------------------------ccc------cccccCccc----ccccccCccCcccc---------------
Confidence 64 344 677899998 99999999999998
Q ss_pred CCCCCccccccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeec
Q 011960 159 WMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVR 237 (474)
Q Consensus 159 ~~~~~~f~~~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~ 237 (474)
|+|+.|++. .|+++|+||+++|+||.+|||+++|+++||| ||+|+.++|.|+|||||+.+++|+|+
T Consensus 105 -------G~~~~G~~~------~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y~~~~~lt~~V~ 171 (426)
T 2btq_B 105 -------GYNVEGEKV------IDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFSVV 171 (426)
T ss_dssp -------HHTHHHHHH------HHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTSEEEEEEEE
T ss_pred -------cccchhHHH------HHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHcCcCceEEEEEe
Confidence 889999988 8999999999999999999999999999999 99999999999999999999999999
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCC
Q 011960 238 SPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRME 317 (474)
Q Consensus 238 p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~ 317 (474)
|.+ ...+.++++||++|++++|.+++|++||++|++|++ +|.+.+. ..+.+.++|.+||++|.++|.++||+
T Consensus 172 p~p------~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~-i~~~~l~-~~~~f~~~N~lia~~v~~it~~lr~~ 243 (426)
T 2btq_B 172 PSP------LISDSAVEPYNAILTLQRILDNADGAVLLDNEALFR-IAKAKLN-RSPNYMDLNNIIALIVSSVTASLRFP 243 (426)
T ss_dssp CCG------GGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHH-HHHHHSS-SCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cCC------ccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHH-HHhccCC-CCcHHHHHHHHHHhhhcchhhhccCC
Confidence 986 456889999999999999999999999999999998 8888888 77899999999999999999999998
Q ss_pred CCCCCCCcccccCccChhhHhhccccccccceeeccccCCCCCCCC--------chhhHHHHHh---cc---CCCCCC--
Q 011960 318 PVGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPALN--------GKQHEQSLLG---NL---QPLTPE-- 381 (474)
Q Consensus 318 ~~g~~~~~~~~~~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~--------~~~~~~~l~~---~~---~~~tp~-- 381 (474)
|. .|+|+.++..+|+|+||.||+ +..+.|+.+.. ..++...+.+ .+ .|....
T Consensus 244 --g~--------lN~D~~d~~t~lvP~P~~hf~--~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yl 311 (426)
T 2btq_B 244 --GK--------LNTDLSEFVTNLVPFPGNHFL--TASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYL 311 (426)
T ss_dssp --CS--------SSCSHHHHHHHHCSSTTCCEE--EEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEE
T ss_pred --Cc--------ccCCHHHHHHHHhhCCCCcee--eccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHH
Confidence 65 689999999999999999993 34566654322 1122222221 11 121111
Q ss_pred --------------CcC--------CCcccCCC--CCc-cceeccCc------eeeeecchhhHHHHHHHHHHHhchhhh
Q 011960 382 --------------LLN--------SPFVGSSP--RGS-LEVHSIPM------AVRLRSSSAILPFLENRLGNLRRYGLQ 430 (474)
Q Consensus 382 --------------~~~--------~~~~~~~~--~~~-~~~~sip~------~~~L~n~t~i~~~~~~~~~~f~~l~~r 430 (474)
+.. ..|+.|.| .+. .+++.+|+ ++.|+|+|+|+++|+++.++|++|+.|
T Consensus 312 a~~~i~rG~v~~~~v~~~~~~ik~~~~fv~W~p~~~~~k~~i~~~~p~~~~~s~~~lsNstaI~~~~~~~~~~f~~m~~r 391 (426)
T 2btq_B 312 AASALFRGDVKAKDVDENMATIRKSLNYASYMPASGGLKLGYAETAPEGFASSGLALVNHTGIAAVFERLIAQFDIMFDN 391 (426)
T ss_dssp EEEEEEECC----CTTTTHHHHHTTSCBCTTSCSSCSEEEEEESCCCTTCSSBCCEEEEEGGGHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCHHHHHHHHHHHhcCCCCcccCCCCCceeeeeeccCCCCCcceeEEecCChHHHHHHHHHHHHHHHHhhc
Confidence 000 14555666 554 67777764 567999999999999999999999877
Q ss_pred ccccccceeeccCCChhhHHHHHHHHHHHHhcccC
Q 011960 431 RGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 465 (474)
Q Consensus 431 r~~~~~~~y~~~G~~~~ef~E~~e~l~~l~~~Y~~ 465 (474)
|+++ |||+++|||++||.||+++|++|+++|++
T Consensus 392 rAfl--h~Y~~eGmee~eF~ea~~~l~~l~~eY~~ 424 (426)
T 2btq_B 392 HAYT--HWYENAGVSRDMMAKARNQIATLAQSYRD 424 (426)
T ss_dssp TSSH--HHHHTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccch--hhhccCCccHHHHHHHHHHHHHHHHHHHh
Confidence 7766 99999999999999999999999999974
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=2.4e-73 Score=594.65 Aligned_cols=371 Identities=18% Similarity=0.269 Sum_probs=305.4
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHHHcCCCCC-CCCCccccccccccccccc---ccccCCCceeeeeeeeeeccccc-
Q 011960 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASD-PNNDPVFRNQCLNMDVLYR---TGETQQGVLTYTPRLLSVGFQGS- 75 (474)
Q Consensus 1 MrEIItlq~Gq~gN~IG~hfWn~q~~~~~~~~~-~~~~~~~~~~~~~~~v~Fr---~g~t~~g~~~y~PR~llvDl~~~- 75 (474)
||||||||+||||||||++||++++.||+++++ |...++... ..+++|||+ +. .+| +|+||+|+||++++
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~-~~~~~~fF~~~~e~--~~~--~~vpRav~vDlep~v 77 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAP-RGNWSSFFSKLGES--SSG--SYVPRAIMVDLEPSV 77 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCC-SSSGGGTEEECSCC----C--CEEECEEEEESSSHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcc-cccccceecccccc--cCC--ceeeeeeEecCcchh
Confidence 999999999999999999999999999999998 765432221 457899998 54 445 99999999999998
Q ss_pred cccccccccccCCCCCCCCCccccCCceeEEecCCCccchHhHhhhhhcccccccccCCCCCCCCcccccccccccchhc
Q 011960 76 LGSMSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDISLYEL 155 (474)
Q Consensus 76 ~~sl~~~g~ly~~~~~~~~~~~~w~g~v~~~~~~~~~k~~y~~~L~~~~~~~~~~~~~~~~~~~n~a~~~~~~~~s~~~l 155 (474)
++.++. ++ +.||++++ ++.++.|+||||++
T Consensus 78 i~~i~~---------------------------~~-------~~lf~p~~----~it~~~GAgnn~a~------------ 107 (473)
T 2bto_A 78 IDNVKA---------------------------TS-------GSLFNPAN----LISRTEGAGGNFAV------------ 107 (473)
T ss_dssp HHHHHH---------------------------HS-------TTCSCGGG----EEECSSCCTTCHHH------------
T ss_pred hhhhhc---------------------------cc-------cccccccc----eEecccCCCCCcCC------------
Confidence 666542 22 34778888 89999999999998
Q ss_pred CCCCCCCCccccccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeee
Q 011960 156 GGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLF 234 (474)
Q Consensus 156 ~~~~~~~~~f~~~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~ 234 (474)
|+|+.|++. .|+++|+||+++|+||++|||+|+|+++||| ||+|+.++|.|+|+||++.+++|
T Consensus 108 ----------G~~~~G~~~------~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e~y~~~~ilt~ 171 (473)
T 2bto_A 108 ----------GYLGAGREV------LPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSC 171 (473)
T ss_dssp ----------HHTSHHHHH------HHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred ----------CcchhhHHH------HHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHHHcCCCceEEE
Confidence 889999988 8999999999999999999999999999999 99999999999999999999999
Q ss_pred eecCCCccccchhhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCC
Q 011960 235 AVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPY 314 (474)
Q Consensus 235 ~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~ 314 (474)
+|+|.+ ...+.++++||++|++++|.+++|++||++|++|++ +|.+.+.+..+.|.++|.+||++|.++|.++
T Consensus 172 ~V~P~~------~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~-i~~~~l~i~~~~f~~~N~lia~~v~~it~~l 244 (473)
T 2bto_A 172 AVLPSP------QVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFD-LAHRKWNIESPTVDDLNLLITEALAGITASM 244 (473)
T ss_dssp EEECCC------CSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHH-HHHHTSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCC------ccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHH-HhccccccCcchHHHHHHHHhhhcccchhhc
Confidence 999986 356788999999999999999999999999999998 8998899988999999999999999999999
Q ss_pred cCCCCCCCCCcccccCccC--hhhHhhccccccccceeeccccCCCCCCCCc--------hhhHHHHHh--c-c---CC-
Q 011960 315 RMEPVGPTADSFDVFGAVD--INGFVQMLAGQARQNTVAILDAAMPAPALNG--------KQHEQSLLG--N-L---QP- 377 (474)
Q Consensus 315 R~~~~g~~~~~~~~~~~~~--l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~~--------~~~~~~l~~--~-~---~~- 377 (474)
||+ |. .++| +.++..+|+|+||.||+ +..+.|+.+... .++...+.+ + + .|
T Consensus 245 r~~--g~--------lN~D~~l~d~~t~LvP~Prlhf~--~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~ 312 (473)
T 2bto_A 245 RFS--GF--------LTVEISLRELLTNLVPQPSLHFL--MCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPM 312 (473)
T ss_dssp HC----------------CCCHHHHHHHHCSSTTCCEE--EEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGG
T ss_pred ccC--Cc--------ccCCccHHhhhhheeecCCccee--eeccccccccchhccccCCHHHHHhhhcccccceeecCCC
Confidence 998 65 6789 99999999999999984 334566554321 122222221 0 1 11
Q ss_pred --------------CCCCCc-C-----------CCcccCCCCCc-cceeccCc------eeeeecchhhHHHHHHHHHHH
Q 011960 378 --------------LTPELL-N-----------SPFVGSSPRGS-LEVHSIPM------AVRLRSSSAILPFLENRLGNL 424 (474)
Q Consensus 378 --------------~tp~~~-~-----------~~~~~~~~~~~-~~~~sip~------~~~L~n~t~i~~~~~~~~~~f 424 (474)
..|.-. . ..| |.|.+. .+++.+|+ +++|+|+|+|+++|+++.++|
T Consensus 313 ~gkyla~~~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g~~~s~~~lsNsTaI~~~~~~l~~kf 390 (473)
T 2bto_A 313 EGRFLSTAVLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGISHRKSMVLLANNTEIARVLDRICHNF 390 (473)
T ss_dssp GSCEEEEEEEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSSCSEEEEEEEEETTHHHHHHHHHHHH
T ss_pred CchHHHHHHhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcCcceeEEEecCCchHHHHHHHHHHHH
Confidence 112111 1 145 445544 67777764 578999999999999999999
Q ss_pred hchhhhccccccceeeccCCChhhHHHHHHHHHHHHhcccC
Q 011960 425 RRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 465 (474)
Q Consensus 425 ~~l~~rr~~~~~~~y~~~G~~~~ef~E~~e~l~~l~~~Y~~ 465 (474)
++|+.||+|+ |||+++|||++||.||+++|++|+++|++
T Consensus 391 ~~m~~rrAfl--H~Y~~eGmee~eF~EA~e~l~~l~~eY~~ 429 (473)
T 2bto_A 391 DKLWQRKAFA--NWYLNEGMSEEQINVLRASAQELVQSYQV 429 (473)
T ss_dssp HHHHTTTTTH--HHHHTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhcchh--HHhhccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9998888766 99999999999999999999999999985
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=99.93 E-value=1.6e-26 Score=232.62 Aligned_cols=152 Identities=11% Similarity=0.088 Sum_probs=132.9
Q ss_pred ccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccch
Q 011960 168 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 246 (474)
Q Consensus 168 ~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~~ 246 (474)
|..|++. .|+..|+||+.+|.|| +|+++|+++||| ||+|+.+++.++| |+ +++++|.|.+
T Consensus 85 ~~~G~~~------aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~~~ke-~g---~lt~~Vvt~P------ 145 (353)
T 1w5f_A 85 PEIGEQA------ALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAKIAKE-MG---ILTVAIVTTP------ 145 (353)
T ss_dssp HHHHHHH------HHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHHH-TT---CEEEEEEEEC------
T ss_pred hHHHHHH------HHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHHHHHH-hC---CcEEEEEeCC------
Confidence 3357776 8899999999999998 499999999999 9999999988886 75 7777776544
Q ss_pred hhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCCCCCCCCcc
Q 011960 247 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 326 (474)
Q Consensus 247 ~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~~g~~~~~~ 326 (474)
...+.++++||+.+++++|.+++|.+|+++|++|++ +|.+.+.+. +.|.++|.+|++++.++|..+|++ |.
T Consensus 146 f~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~-i~~~~l~i~-~af~~~N~ll~~~v~~it~~ir~p--G~----- 216 (353)
T 1w5f_A 146 FYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLME-ELPRDVKIK-DAFLKADETLHQGVKGISELITKR--GY----- 216 (353)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHT-TSCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHCC--CC-----
T ss_pred cccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHh-hhcccCCHH-HHHHHHHHHHHHHhcCchhhccCC--cc-----
Confidence 245678999999999999999999999999999999 888888877 578899999999999999999998 65
Q ss_pred cccCcc--ChhhHhhccccccccceee
Q 011960 327 DVFGAV--DINGFVQMLAGQARQNTVA 351 (474)
Q Consensus 327 ~~~~~~--~l~~~~~~L~~~~r~~~~~ 351 (474)
.|+ |+.++.++|+| |+.+++.
T Consensus 217 ---iNv~~D~~dv~t~L~~-~g~a~~g 239 (353)
T 1w5f_A 217 ---IRLTSRFARIESVMKD-AGAAILG 239 (353)
T ss_dssp ---CCHHHHHHHHHHHHTT-CEEEEEE
T ss_pred ---cccccCHHHHHHhccC-CCeeEEE
Confidence 789 99999999999 8887653
No 7
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=99.93 E-value=4e-26 Score=231.19 Aligned_cols=151 Identities=14% Similarity=0.128 Sum_probs=131.8
Q ss_pred ccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccch
Q 011960 168 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 246 (474)
Q Consensus 168 ~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~~ 246 (474)
|..|++. .|+..|+||+.+|.|| +|+|+|+++||| ||+++.+++ |+.||+ +++++|.+.+
T Consensus 75 ~~~G~~~------aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la~e~g---~ltvsVv~~P------ 135 (382)
T 1rq2_A 75 PEVGRKA------AEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IARKLG---ALTVGVVTRP------ 135 (382)
T ss_dssp HHHHHHH------HHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHHT---CEEEEEEEEC------
T ss_pred hHHHHHH------HHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHHcC---CcEEEEEecC------
Confidence 4457776 8899999999999998 599999999999 999999988 889998 5566664433
Q ss_pred hhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCCCCCCCCcc
Q 011960 247 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 326 (474)
Q Consensus 247 ~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~~g~~~~~~ 326 (474)
...+.++++||+++++++|.+++|.+|+++|++|++ +|.+.+.+. +.|.++|.+|++++.++|..+||+ |.
T Consensus 136 f~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~-i~~~~l~i~-~af~~~N~li~~~vs~it~~ir~p--G~----- 206 (382)
T 1rq2_A 136 FSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQ-MGDAAVSLM-DAFRSADEVLLNGVQGITDLITTP--GL----- 206 (382)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTT-SSCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHSB--CS-----
T ss_pred cccccchHHHHHHHHHHHHHHhCCEEEEEechhHHH-HhcCCCCHH-HHHHHHHHHHHHHHHHHHHHHccC--Cc-----
Confidence 245788999999999999999999999999999999 898888877 578899999999999999999998 65
Q ss_pred cccCccChhhHhhcccccccccee
Q 011960 327 DVFGAVDINGFVQMLAGQARQNTV 350 (474)
Q Consensus 327 ~~~~~~~l~~~~~~L~~~~r~~~~ 350 (474)
.|+|+.++..+|+| ++.+++
T Consensus 207 ---iNvD~~dv~t~L~~-~g~a~~ 226 (382)
T 1rq2_A 207 ---INVDFADVKGIMSG-AGTALM 226 (382)
T ss_dssp ---SCCCHHHHHHHHTT-CEEEEE
T ss_pred ---eeccHHHHHHhccC-CCeeEE
Confidence 78999999999998 676654
No 8
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=99.93 E-value=5.6e-26 Score=229.02 Aligned_cols=144 Identities=15% Similarity=0.098 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccchhhhhhHHHHHHHH
Q 011960 181 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDT 259 (474)
Q Consensus 181 ~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~ 259 (474)
.|+..|+||+.+|.||.+ +++|+++||| ||+|+.+++.++| | .+++++|.|.+ ...+.++++||+.
T Consensus 108 ~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke-~---~~lt~~Vv~~P------f~~eg~~~~ynA~ 174 (364)
T 2vap_A 108 AKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK-I---GALTVAVVTLP------FVMEGKVRMKNAM 174 (364)
T ss_dssp HHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-T---TCEEEEEEEEC------CGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH-h---CCcEEEEeCCC------ccccchhHHHHHH
Confidence 889999999999999988 9999999999 9999999999997 8 46777776654 2456799999999
Q ss_pred HHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCCCCCCCCcccccCccChhhHhh
Q 011960 260 VSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQ 339 (474)
Q Consensus 260 Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~~g~~~~~~~~~~~~~l~~~~~ 339 (474)
+++++|.+++|.+++++|++|++ +|. .+.+ .+.|.++|.+|++++.++|..+|++ |. .|+|+.++.+
T Consensus 175 ~~l~~L~e~~D~~ividNeaL~~-i~~-~l~i-~~af~~~N~li~~~v~~it~~ir~p--G~--------iNvD~~dv~t 241 (364)
T 2vap_A 175 EGLERLKQHTDTLVVIPNEKLFE-IVP-NMPL-KLAFKVADEVLINAVKGLVELITKD--GL--------INVDFADVKA 241 (364)
T ss_dssp HHHHHHHTTCSEEEEEEGGGHHH-HST-TCCH-HHHHHHHHHHHHHHHHHHHHHHHSC--CS--------BCCCHHHHHH
T ss_pred HHHHHHHHhCCeEEEEcHHHHHH-HHc-cCCh-hhhhhhHHHHHHHHHhhhhHHhhcC--Cc--------eeccHHHHHH
Confidence 99999999999999999999998 787 7777 6789999999999999999999998 65 7899999999
Q ss_pred ccccccccceee
Q 011960 340 MLAGQARQNTVA 351 (474)
Q Consensus 340 ~L~~~~r~~~~~ 351 (474)
+|+| |+.+++.
T Consensus 242 ~L~~-~g~a~~g 252 (364)
T 2vap_A 242 VMNN-GGLAMIG 252 (364)
T ss_dssp HHTT-CEEEEEE
T ss_pred hccC-CCeeEEE
Confidence 9999 8887753
No 9
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=99.92 E-value=7.4e-26 Score=225.57 Aligned_cols=151 Identities=17% Similarity=0.093 Sum_probs=130.0
Q ss_pred ccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccch
Q 011960 168 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 246 (474)
Q Consensus 168 ~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~~ 246 (474)
|..|++. .|+..|+||+.+|.|| +|+++|+++||| ||+|+.+ ..+..||+ +++++|.|.+
T Consensus 75 ~~~G~~~------~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~l-a~~a~e~g---~lt~~vv~~P------ 135 (320)
T 1ofu_A 75 PEVGRQA------ALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPII-AEVAKEMG---ILTVAVVTRP------ 135 (320)
T ss_dssp HHHHHHH------HHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHH-HHHHHHTT---CEEEEEEEEC------
T ss_pred HHHHHHH------HHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHH-HHHHHhcC---CcEEEEEeCC------
Confidence 3357766 8899999999999998 599999999999 9999965 56778884 5666765443
Q ss_pred hhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCCCCCCCCcc
Q 011960 247 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 326 (474)
Q Consensus 247 ~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~~g~~~~~~ 326 (474)
...+.++++||+.+++++|.+++|.+|+++|++|++ +|.+.+.+. +.|.++|.+|++++.++|..+|++ |.
T Consensus 136 ~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~-i~~~~l~i~-~af~~~n~~l~~~v~~it~~ir~p--G~----- 206 (320)
T 1ofu_A 136 FPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLT-ILGKDASLL-AAFAKADDVLAGAVRGISDIIKRP--GM----- 206 (320)
T ss_dssp CGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHH-HHGGGCCHH-HHHHHHHHHHHHHHHHHHHHHHSC--SS-----
T ss_pred ccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhh-hhhcCCCHH-HHHHHHHHHHHHHhcccHhhcccC--Cc-----
Confidence 245678999999999999999999999999999998 888888776 578899999999999999999998 65
Q ss_pred cccCccChhhHhhcccccccccee
Q 011960 327 DVFGAVDINGFVQMLAGQARQNTV 350 (474)
Q Consensus 327 ~~~~~~~l~~~~~~L~~~~r~~~~ 350 (474)
.|+|+.++.++|+| |+.+++
T Consensus 207 ---iNvD~~dv~t~l~~-~g~~~~ 226 (320)
T 1ofu_A 207 ---INVDFADVKTVMSE-MGMAMM 226 (320)
T ss_dssp ---SSCCHHHHHHHHTT-CEEEEE
T ss_pred ---eeecHHHHHHhccC-CCeeEE
Confidence 78999999999999 787764
No 10
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=99.92 E-value=1.8e-25 Score=226.50 Aligned_cols=152 Identities=13% Similarity=0.081 Sum_probs=132.3
Q ss_pred ccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccch
Q 011960 168 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 246 (474)
Q Consensus 168 ~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~~ 246 (474)
|..|++. .|+..|+||+.+|.|| +|+|+|+++||| ||+|+.+++.++ ||+ +++++|.+.+
T Consensus 75 ~a~G~e~------aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ak-e~g---~ltvsVvt~P------ 135 (382)
T 2vxy_A 75 PEVGKKA------AEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQIAK-DLG---ALTVGVVTRP------ 135 (382)
T ss_dssp HHHHHHH------HHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHHHH-HTT---CEEEEEEEEC------
T ss_pred hHHHHHH------HHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHHHH-HhC---CCeEEEEeCC------
Confidence 3357776 8889999999999998 499999999999 999999988776 585 6677775544
Q ss_pred hhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCCCCCCCCcc
Q 011960 247 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 326 (474)
Q Consensus 247 ~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~~g~~~~~~ 326 (474)
...+.++++||+.+++++|.+++|.+|+++|++|++ +|.+.+.+. +.|.++|.+|++++.++|..+||+ |.
T Consensus 136 f~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~-i~~~~l~i~-~af~~~N~ll~~~vsgIt~~ir~p--G~----- 206 (382)
T 2vxy_A 136 FTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILE-IVDKNTPML-EAFREADNVLRQGVQGISDLIATP--GL----- 206 (382)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHH-HSCTTCCHH-HHHHHHHHHHHHHHHHHHTTTSSC--CT-----
T ss_pred cccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHH-HHHhcCCHH-HHHHHHHHHHHHHHHHHHHHHcCC--Cc-----
Confidence 346789999999999999999999999999999999 888888877 578899999999999999999998 65
Q ss_pred cccCccChhhHhhccccccccceee
Q 011960 327 DVFGAVDINGFVQMLAGQARQNTVA 351 (474)
Q Consensus 327 ~~~~~~~l~~~~~~L~~~~r~~~~~ 351 (474)
.|+|+.++..+|++ ++.+++.
T Consensus 207 ---iNvD~~dv~t~L~~-~g~a~~g 227 (382)
T 2vxy_A 207 ---INLDFADVKTIMSN-KGSALMG 227 (382)
T ss_dssp ---TCCCHHHHHHHTTC-SSEEEEE
T ss_pred ---cccCHHHHHHhccC-CCceEEE
Confidence 78999999999998 7877643
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=99.92 E-value=3.4e-25 Score=225.26 Aligned_cols=151 Identities=17% Similarity=0.075 Sum_probs=131.0
Q ss_pred ccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccch
Q 011960 168 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 246 (474)
Q Consensus 168 ~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~~ 246 (474)
|..|++. .|+..|+||+.+|.|| +|+|+|+++||| ||+|+.+++.++ ||+ +++++|.|.+
T Consensus 75 ~~~G~~~------aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~k-e~g---~ltvsVv~~P------ 135 (394)
T 2vaw_A 75 PEVGRQA------ALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVAK-EMG---ILTVAVVTRP------ 135 (394)
T ss_dssp HHHHHHH------HHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHHH-HHT---CEEEEEEEEC------
T ss_pred HHHHHHH------HHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHHH-HcC---CcEEEEecCC------
Confidence 3357766 7889999999999998 599999999999 999999999988 774 6677776544
Q ss_pred hhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCCCCCCCCcc
Q 011960 247 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 326 (474)
Q Consensus 247 ~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~~g~~~~~~ 326 (474)
...+.++++||+.+++++|.+++|.+|+++|++|++ +|.+.+.+. +.|.++|.+|++++.++|..+|++ |.
T Consensus 136 f~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~-i~~~~l~i~-~af~~~N~li~~~v~~it~~ir~p--G~----- 206 (394)
T 2vaw_A 136 FPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLT-ILGKDASLL-AAFAKADDVLAGAVRGISDIIKRP--GM----- 206 (394)
T ss_dssp CGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHH-HHGGGCCHH-HHHHHHHHHHHHHHHHHHHHHHSB--CS-----
T ss_pred cccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHH-HhhcCCChH-HHHHHHHHHHHHHHHHHHHHhcCC--Cc-----
Confidence 245778999999999999999999999999999998 888888776 578899999999999999999998 65
Q ss_pred cccCccChhhHhhcccccccccee
Q 011960 327 DVFGAVDINGFVQMLAGQARQNTV 350 (474)
Q Consensus 327 ~~~~~~~l~~~~~~L~~~~r~~~~ 350 (474)
.|+|+.++..+|++ ++.+++
T Consensus 207 ---iNvD~~dv~t~L~~-~g~a~~ 226 (394)
T 2vaw_A 207 ---INVDFADVKTVMSE-MGMAMM 226 (394)
T ss_dssp ---SCCCHHHHHHHHTT-TCCBEE
T ss_pred ---ccccHHHHHHhccC-CCceeE
Confidence 78999999999998 565554
No 12
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=99.91 E-value=6.6e-25 Score=220.11 Aligned_cols=149 Identities=15% Similarity=0.156 Sum_probs=133.3
Q ss_pred ccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccchhh
Q 011960 170 IGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLRSR 248 (474)
Q Consensus 170 ~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~~~~ 248 (474)
.|++. .|+.+|+||+.+|.||.+ +++|+++||| ||+++. ++.|++||| +++++|.|.+ ..
T Consensus 73 ~G~~~------~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~~e~g---~lt~~Vv~~P------~~ 133 (338)
T 2r75_1 73 VGEEA------ALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTAKEMG---ILTVAVATLP------FR 133 (338)
T ss_dssp HHHHH------HHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHHHHTT---CEEEEEEEEC------CG
T ss_pred HHHHH------HHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHHHhcC---CCEEEEeCCC------cc
Confidence 46666 899999999999999988 8999999999 999988 888999997 6788887765 35
Q ss_pred hhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCCCCCCCCcccc
Q 011960 249 KQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSFDV 328 (474)
Q Consensus 249 ~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~~g~~~~~~~~ 328 (474)
.+.++++||+++++++|.+++|.+++++|++|++ +|.+.+.+. +.|.++|.+|++++.++|.++||+ |.
T Consensus 134 ~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~-i~~~~l~i~-~af~~~N~~i~~~v~~it~~ir~p--G~------- 202 (338)
T 2r75_1 134 FEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKE-LSNRTLTIK-DAFKEVDSVLSKAVRGITSIVVTP--AV------- 202 (338)
T ss_dssp GGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHH-TSCCCSSHH-HHHHHHHHHHHHHHHHHHHHHHSC--CS-------
T ss_pred ccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHh-hhhccCChH-HHHHHHHHHHHHHHhhhhhhhccC--Cc-------
Confidence 6889999999999999999999999999999999 888888877 689999999999999999999998 65
Q ss_pred cCccChhhHhhcccccccccee
Q 011960 329 FGAVDINGFVQMLAGQARQNTV 350 (474)
Q Consensus 329 ~~~~~l~~~~~~L~~~~r~~~~ 350 (474)
.++|+.++.++|+|+ +.+++
T Consensus 203 -iNvD~~dv~t~L~~~-g~a~~ 222 (338)
T 2r75_1 203 -INVDFADVRTTLEEG-GLSII 222 (338)
T ss_dssp -BCCCHHHHHHHHTTC-EEEEE
T ss_pred -eeCCHHHhhhheeCC-cccee
Confidence 789999999999998 54553
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=99.86 E-value=5.3e-22 Score=200.47 Aligned_cols=226 Identities=12% Similarity=0.082 Sum_probs=160.4
Q ss_pred EEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCcccccccccccccccccccCCCceeeeeeeeeeccccc-ccccccc
Q 011960 4 IVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSMSSR 82 (474)
Q Consensus 4 IItlq~Gq~gN~IG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~Fr~g~t~~g~~~y~PR~llvDl~~~-~~sl~~~ 82 (474)
|..|-+|++|+.+..++.+. +. .+| +|.||+|++|+++. +.+|+.
T Consensus 45 i~VIGvGg~G~n~v~~m~~~------------------------------~~-~~g--~~~~~~iavNtd~~dl~~L~~- 90 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAGY------------------------------KF-SNG--TTCYPTLAVNFAESDMMHLQN- 90 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTTC------------------------------BC-TTS--CBSCCEEEEESSGGGGTTCSS-
T ss_pred EEEEEECCcHHHHHHHHHHh------------------------------Cc-ccC--CcCceEEEEECCHHHHHHHhc-
Confidence 66788999999888876410 01 134 78999999999997 776642
Q ss_pred ccccCCCCCCCCCccccCCceeEEecCCCccchHhHhhhhhccccccc-ccCCCCCCCCcccccccccccchhcCCCCCC
Q 011960 83 GLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSM-INGTSSGKSDSQREIQDKDISLYELGGLWMD 161 (474)
Q Consensus 83 g~ly~~~~~~~~~~~~w~g~v~~~~~~~~~k~~y~~~L~~~~~~~~~~-~~~~~~~~~n~a~~~~~~~~s~~~l~~~~~~ 161 (474)
.|. ++. + +.|+.|+|+||++
T Consensus 91 --------------------------~~~-----------~~~----i~l~G~~GAG~np~~------------------ 111 (427)
T 3m89_A 91 --------------------------IIK-----------EDR----IHFDGLKGAARTPSV------------------ 111 (427)
T ss_dssp --------------------------SCG-----------GGE----EEC-----------C------------------
T ss_pred --------------------------CCC-----------cce----EEecCCCCCCCCHHH------------------
Confidence 221 111 3 4577899998876
Q ss_pred CCcccccccccccc-ccCcchhHHHHHHHHHhh---hcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeee
Q 011960 162 PQEFDNYGIGKDAF-SEGFRGEEICERLRFFVE---ESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAV 236 (474)
Q Consensus 162 ~~~f~~~~~G~~~~-~~~~~~d~~~d~iR~~~E---eCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v 236 (474)
|.+..|.+-= ...++.|++++.||+.+| .||.++||+++++++||| ||+|+.+++.++++|++++++++++
T Consensus 112 ----G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~la~~lke~~~~~~~~~vvt 187 (427)
T 3m89_A 112 ----VTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLIS 187 (427)
T ss_dssp ----HHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHHHHHHTTCSSSCEEEEEE
T ss_pred ----HHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4444421000 110137899999999999 889999999999999999 9999999999999999999999999
Q ss_pred cCCCccccchhhhhhHHHHHHHHHHHhhh---cc------------cccEEEEecCCCCCcccccccCc---cC--CCCc
Q 011960 237 RSPSSQMNLRSRKQTIFRELHDTVSFSRL---AS------------FGKLIVPVGLPFLNESKASTLLC---IE--NEKP 296 (474)
Q Consensus 237 ~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l---~~------------~sd~~~pl~n~~l~~~~~~~~l~---~~--~~~~ 296 (474)
+|.. .. .++||+++++++| .+ ++|.+|+++|+++.. ++.+... .. .+.|
T Consensus 188 ~P~~------~e----~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~-i~~~~~~~~~~~~~~~af 256 (427)
T 3m89_A 188 LPSG------DP----DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQR-IIESQKGTKDLKNRYVNW 256 (427)
T ss_dssp ECCS------CH----HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHH-HHHHSSCSSSCCCSCSCH
T ss_pred ECCC------Cc----cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHH-HHhhccccccccchhhHH
Confidence 9976 22 2349999999997 44 999999999999754 3332211 11 2267
Q ss_pred c-hHHHHHHHHHhhcccC-Cc-CCCCCCCCCcccccCccChhhHhhcccccccc
Q 011960 297 Y-HCSAVYAAALHSATLP-YR-MEPVGPTADSFDVFGAVDINGFVQMLAGQARQ 347 (474)
Q Consensus 297 ~-~~n~liA~~l~t~T~~-~R-~~~~g~~~~~~~~~~~~~l~~~~~~L~~~~r~ 347 (474)
. .+|.+||++|.+++.. .| ++ |. .++|+.++.++|+|.++.
T Consensus 257 ~~~aN~~Ia~~I~~I~~~i~~~~~--G~--------iNvD~aDv~t~L~~~~G~ 300 (427)
T 3m89_A 257 KEVANDNVVSTLHEINIIPENYGS--DN--------VTYDPSDLIKLLSIPGRF 300 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCC--SS--------SCCCHHHHHHHHHSSCSE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCC--Cc--------EeecHHHHHHhCCCCCCe
Confidence 7 6999999999999875 45 44 54 689999999999987774
No 14
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.81 E-value=2.7e-20 Score=184.78 Aligned_cols=143 Identities=13% Similarity=0.127 Sum_probs=125.0
Q ss_pred cccccccccccCcchhHHH-HHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCcccc
Q 011960 167 NYGIGKDAFSEGFRGEEIC-ERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMN 244 (474)
Q Consensus 167 ~~~~G~~~~~~~~~~d~~~-d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~ 244 (474)
+|..|++. .++.. |+||+.+|+|+.+|||+++|+++||| ||+|+.+++.|+++||++++.+++++|..
T Consensus 63 np~vG~ea------aee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~v~~vtV~Pf~---- 132 (360)
T 3v3t_A 63 ERKKAVGY------AQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKHFGFVGVLPKA---- 132 (360)
T ss_dssp CHHHHHHH------HGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSEEEEEEEECCT----
T ss_pred CHHHHHHH------HHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCeEEEEEEeCCC----
Confidence 45567777 66667 99999999999999999999999999 99999999999999999999999999976
Q ss_pred chhhhhhHHHHHHHHHHHhhhccccc-----EEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCCC
Q 011960 245 LRSRKQTIFRELHDTVSFSRLASFGK-----LIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPV 319 (474)
Q Consensus 245 ~~~~~~~~~~~yN~~Lsl~~l~~~sd-----~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~~ 319 (474)
. +.++++||+++++++|.+++| ++|+++|++ .+.|.++|.+||+++.++|...|++
T Consensus 133 --~--Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea-------------~~ay~~lN~lIaq~vs~lt~~l~~~-- 193 (360)
T 3v3t_A 133 --T--EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK-------------REKESDINKEFATLFNDFMNMSESH-- 193 (360)
T ss_dssp --T--SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG-------------SSSHHHHHHHHHHHHHHHHGGGSCC--
T ss_pred --c--cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC-------------chhHHHHHHHHHHHHHHHHHhhccC--
Confidence 2 468999999999999999544 669999986 2568899999999999999999998
Q ss_pred CCCCCcccccCccChhhHhhccccccc
Q 011960 320 GPTADSFDVFGAVDINGFVQMLAGQAR 346 (474)
Q Consensus 320 g~~~~~~~~~~~~~l~~~~~~L~~~~r 346 (474)
|. .++|+.++-+.|...+.
T Consensus 194 G~--------iNVDfaDv~tvm~~~G~ 212 (360)
T 3v3t_A 194 AE--------GVVDEDEISKLLTMKKS 212 (360)
T ss_dssp SS--------CCCCHHHHHHHHHCCEE
T ss_pred Cc--------eeeeHHHHHHHHhCCCc
Confidence 65 78999999877765443
No 15
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.80 E-value=4.5e-20 Score=185.09 Aligned_cols=149 Identities=15% Similarity=0.127 Sum_probs=130.0
Q ss_pred cccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccc
Q 011960 167 NYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNL 245 (474)
Q Consensus 167 ~~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~ 245 (474)
+|..|++. .|+..|+||+.+|.|| +|+|+|+++||| ||+++.++ .+..||+ +++++|.|.+
T Consensus 80 np~vG~ea------aee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIa-eiake~g---~LtvsVVt~P----- 141 (396)
T 4dxd_A 80 NPEIGKKA------AEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVA-KIAKEMG---ALTVGVVTRP----- 141 (396)
T ss_dssp CHHHHHHH------HHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHH-HHHHHTT---CEEEEEEEEC-----
T ss_pred ChHHHHHH------HHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHH-HHHHhcC---CceEEEEeCC-----
Confidence 45568777 8899999999999999 499999999999 99999655 5778896 5788886544
Q ss_pred hhhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcCCCCCCCCCc
Q 011960 246 RSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADS 325 (474)
Q Consensus 246 ~~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~~~~g~~~~~ 325 (474)
...+..+++||+.+++++|.+++|++|+++|++|++ +|.+.+.+.. .|.++|.+|++++.++|..+||+ |.
T Consensus 142 -f~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~-I~~~~l~i~~-af~~aN~ll~q~VsgIT~~irfp--G~---- 212 (396)
T 4dxd_A 142 -FSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLD-IVDKSTPMME-AFKEADNVLRQGVQGISDLIAVS--GE---- 212 (396)
T ss_dssp -CGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGG-TCCTTCCHHH-HHHHHHHHHHHHHHHHHHHHHSC--CT----
T ss_pred -ccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHH-hhcccccHHH-HHHHHHHHHHHHHHhhhhhhccC--Cc----
Confidence 345778999999999999999999999999999999 8888777764 78899999999999999999998 65
Q ss_pred ccccCccChhhHhhccccccc
Q 011960 326 FDVFGAVDINGFVQMLAGQAR 346 (474)
Q Consensus 326 ~~~~~~~~l~~~~~~L~~~~r 346 (474)
.|+|+.++.++|...+.
T Consensus 213 ----iNvDfaDv~t~m~~~G~ 229 (396)
T 4dxd_A 213 ----VNLDFADVKTIMSNQGS 229 (396)
T ss_dssp ----BCCCHHHHHHHHTTCEE
T ss_pred ----ccCCHHHHHHHhhcCCe
Confidence 78999999999987644
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=98.31 E-value=1.2e-06 Score=89.08 Aligned_cols=155 Identities=15% Similarity=0.092 Sum_probs=102.4
Q ss_pred ccccccccccCcchhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccch
Q 011960 168 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 246 (474)
Q Consensus 168 ~~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~~ 246 (474)
+..|++...+ ..|++.+.|+..++.+|. +.+++.++||| +|.+..+++.+++ ++ .++......|...
T Consensus 87 p~~G~~aa~e--~~~~i~~~l~~~~~~~d~---vfi~ag~GGGTGtGa~pvia~~~ke-~~-~~~~~vvt~Pf~~----- 154 (389)
T 4ei7_A 87 PQVGEEAFVK--HETKIFEAVKQEFEDRDF---IWITCGLGGGTGTGALLKAIEMLYE-HD-YNFGLLLTLPRDA----- 154 (389)
T ss_dssp HHHHHHHHHH--THHHHHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHH-TT-CCEEEEEEECCGG-----
T ss_pred hHHHHHHHHH--HHHHHHHHHHhhcCCccE---EEEEecCCCCCccccHHHHHHHHHH-cC-CCEEEEEEeCCCc-----
Confidence 4456665432 367788888888888884 58899999999 9988888888776 32 3344444467542
Q ss_pred hhhhhHHHHHHHHHHHhhhcccccEEEEecCCCCCccccc---ccCccCCCCcchHHHHHHHHHhhcc----cCCcCCCC
Q 011960 247 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKAS---TLLCIENEKPYHCSAVYAAALHSAT----LPYRMEPV 319 (474)
Q Consensus 247 ~~~~~~~~~yN~~Lsl~~l~~~sd~~~pl~n~~l~~~~~~---~~l~~~~~~~~~~n~liA~~l~t~T----~~~R~~~~ 319 (474)
+-.....++++.+..|.++.+++|.+|+++|+.|.+ +.. +.+.+. ..+...|.+|+..+..++ .+.+.
T Consensus 155 Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~-~~~~~~~~~~~~-~af~~an~~l~~~v~~i~~~~~~~~~~--- 229 (389)
T 4ei7_A 155 EALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYR-KFEEENPSALAN-EYTSYSNKYIADALHEINLVTSSFTPF--- 229 (389)
T ss_dssp GHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHH-HHHHHCTTCCGG-GHHHHHHHHHHHHHHHHHHHTTSSEES---
T ss_pred CchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHH-HHhhcCCCCCHH-HHHHHHHHHHHHHHHHHHHHHhCCCCC---
Confidence 234555667777777777788999999999998765 221 122211 234557889888765543 33322
Q ss_pred CCCCCcccccCccChhhHhhcccccccc
Q 011960 320 GPTADSFDVFGAVDINGFVQMLAGQARQ 347 (474)
Q Consensus 320 g~~~~~~~~~~~~~l~~~~~~L~~~~r~ 347 (474)
|. .++|..++-..|...+..
T Consensus 230 g~--------in~D~aDv~~vm~~~G~a 249 (389)
T 4ei7_A 230 SD--------THFDASEFAQVINTPGVL 249 (389)
T ss_dssp SS--------CCCCHHHHHHHHTSSEEE
T ss_pred Ce--------EEeeHHHHHHHhcCCCEE
Confidence 22 467888988888765543
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=93.09 E-value=0.32 Score=46.77 Aligned_cols=113 Identities=13% Similarity=0.124 Sum_probs=76.8
Q ss_pred hHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHHHHHhCCcceeeeeecCCCccccchhhhhhHHHHHHHHH
Q 011960 182 EEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTV 260 (474)
Q Consensus 182 d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L~DEY~~~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~L 260 (474)
++-.+.|++.+|.+|- +.++..++||| +|.+=-+++.+++.- ..+..+.+.|.. .........|++-
T Consensus 68 ~e~~~eI~~~l~~aD~---VFVtaGLGGGTGTGaAPVvAeiake~G--alvVavVt~~~E-------~~~~~~Nai~al~ 135 (315)
T 3r4v_A 68 RPQIPALMDTIPEADF---YIVCYSLGGGSGSVLGPLITGQLADRK--ASFVSFVVGAME-------STDNLGNDIDTMK 135 (315)
T ss_dssp GGGHHHHHHTSCCBSC---EEEEEESSSSSHHHHHHHHHHHHHHTT--CCEEEEEEECCS-------SHHHHHHHHHHHH
T ss_pred HhhHHHHHHhcCCCCE---EEEEeccCCccccchHHHHHHHHHHcC--CCEEEEEecCCC-------cchhhhchHHHHH
Confidence 3344466777777665 68899999999 898888888888872 245666666543 2234455566788
Q ss_pred HHhhhcccccEEEEecCCCCCcccccccCccCCCCcchHHHHHHHHHhhcccCCcC
Q 011960 261 SFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRM 316 (474)
Q Consensus 261 sl~~l~~~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~t~T~~~R~ 316 (474)
+|..|.+.+|..|+++ +.. ..+ .-.+..+|.-+|.-|..+..-+-.
T Consensus 136 ~LE~La~~~dt~Iv~d---~Le--n~~-----~lp~~~lN~eia~rL~al~~l~~~ 181 (315)
T 3r4v_A 136 TLEAIAVNKHLPIVVN---YVP--NTQ-----GRSYESINDEIAEKIRKVVLLVNQ 181 (315)
T ss_dssp HHHHHHHHHTSCEEEE---EEE--CCT-----TCCHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHhccCCcEEEe---ccc--cCC-----CCchHHHHHHHHHHHHHHHHHhcc
Confidence 8999999888877777 221 111 223578899999988887654433
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=89.19 E-value=0.12 Score=33.57 Aligned_cols=19 Identities=11% Similarity=0.184 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHHHHhcccC
Q 011960 447 DELYDMGEMLSKMVSTMKP 465 (474)
Q Consensus 447 ~ef~E~~e~l~~l~~~Y~~ 465 (474)
+||.||+++|+.|+++|++
T Consensus 1 ~EFsEA~edl~~L~~dYee 19 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEE 19 (36)
T ss_pred CcchHHHHHHHHHHHHHHH
Confidence 4899999999999999985
No 19
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=75.62 E-value=3.5 Score=35.38 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHhhhc-CCCCcEEEEEeCCCCc-hhhHHHHH
Q 011960 181 GEEICERLRFFVEES-DHIQGFQFVVDDSGGF-SAVAADLL 219 (474)
Q Consensus 181 ~d~~~d~iR~~~EeC-D~lqGfq~~~s~~gG~-sG~~s~ll 219 (474)
.+++.++++..+++. |.=.|+.+++|+.||+ .-.+..++
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l~ 83 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSMM 83 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHHh
Confidence 678999999999999 9899999999999999 77776663
No 20
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=75.47 E-value=2.4 Score=36.17 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHH
Q 011960 181 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLL 219 (474)
Q Consensus 181 ~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~ll 219 (474)
.+++.++++..+++.|. .|+.+++|+-||+ .-.+..++
T Consensus 45 ~~~~~~~i~~~i~~~~~-~gvliLtDl~GGSp~n~a~~~~ 83 (142)
T 3bed_A 45 LSGTQAKLAAILKEAGN-VPTLVLADLXGGTPCNVAMMAM 83 (142)
T ss_dssp HHHHHHHHHHHHHHHCS-CCEEEEESSTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECCCCHHHHHHHHHh
Confidence 57789999999999999 9999999999998 66655444
No 21
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=73.74 E-value=4.6 Score=33.99 Aligned_cols=39 Identities=26% Similarity=0.407 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHH
Q 011960 181 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLL 219 (474)
Q Consensus 181 ~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~ll 219 (474)
.+++.++++..+++.|.=.|+.+++|+-||+ .-.+..++
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~~~~ 80 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIV 80 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHH
Confidence 6789999999999999889999999999998 66655544
No 22
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=73.57 E-value=2.6 Score=36.44 Aligned_cols=42 Identities=12% Similarity=0.136 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHHHH
Q 011960 181 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENI 222 (474)
Q Consensus 181 ~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle~L 222 (474)
.+++.++++..+++.|.-.|+.+++|+-||+ .-.+..++..+
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~~~~~ 83 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVINEL 83 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHhh
Confidence 6788999999999999999999999999999 66666666543
No 23
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=68.09 E-value=8.3 Score=32.31 Aligned_cols=39 Identities=21% Similarity=0.280 Sum_probs=32.2
Q ss_pred chhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHHH
Q 011960 180 RGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLE 220 (474)
Q Consensus 180 ~~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~lle 220 (474)
..+++.++++..+++.|.-+|+.+++|+ |+ .-++..+.+
T Consensus 43 ~~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~~ 82 (130)
T 3gx1_A 43 EVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILTE 82 (130)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 3688999999999999999999999999 66 665554443
No 24
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=65.40 E-value=3.3 Score=36.21 Aligned_cols=38 Identities=11% Similarity=0.123 Sum_probs=32.6
Q ss_pred hHHHHHHHHHhhhcCCCCcEEEEEeCCCCc-hhhHHHHH
Q 011960 182 EEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLL 219 (474)
Q Consensus 182 d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~-sG~~s~ll 219 (474)
+++.++++..++++|.-.|+.+++|+-||+ .-.+..++
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP~n~a~~~~ 99 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSVNNEFVRFL 99 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHh
Confidence 578899999999999999999999999999 66655554
No 25
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=60.75 E-value=12 Score=31.83 Aligned_cols=39 Identities=23% Similarity=0.261 Sum_probs=32.0
Q ss_pred chhHHHHHHHHHhhh--cCCCCcEEEEEeCCCCc-hhhHHHHHH
Q 011960 180 RGEEICERLRFFVEE--SDHIQGFQFVVDDSGGF-SAVAADLLE 220 (474)
Q Consensus 180 ~~d~~~d~iR~~~Ee--CD~lqGfq~~~s~~gG~-sG~~s~lle 220 (474)
..+++.++++..+++ .|.-.|+.+++|+ |+ .-++..+.+
T Consensus 43 ~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~~ 84 (139)
T 3gdw_A 43 EVQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLFE 84 (139)
T ss_dssp CHHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 368899999999999 8899999999999 66 666655443
No 26
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=54.09 E-value=4.9 Score=33.92 Aligned_cols=30 Identities=17% Similarity=0.053 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc
Q 011960 181 GEEICERLRFFVEESDHIQGFQFVVDDSGGF 211 (474)
Q Consensus 181 ~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~ 211 (474)
.+++.++|+..++++|.=+|+.+++|+ ||+
T Consensus 47 ~~~~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 47 LGSDPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp SSCCHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 456777888889999888999999999 776
No 27
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=37.23 E-value=15 Score=30.73 Aligned_cols=29 Identities=17% Similarity=0.143 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHhhhcCCCCcEEEEEeCCCCc
Q 011960 181 GEEICERLRFFVEESDHIQGFQFVVDDSGGF 211 (474)
Q Consensus 181 ~d~~~d~iR~~~EeCD~lqGfq~~~s~~gG~ 211 (474)
.+++.++|+..++++|. +|+.+++|+ ||+
T Consensus 42 ~~~~~~~i~~ai~~~~~-dgVlvltDL-Ggs 70 (131)
T 3ct6_A 42 IGTSFDRVMNAIEENEA-DNLLTFFDL-GSA 70 (131)
T ss_dssp SSCCHHHHHHHHHHSSC-SEEEEEESS-GGG
T ss_pred HHHHHHHHHHHHHhCCC-CCEEEEEeC-CCC
Confidence 56677888888888884 899999999 776
No 28
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=35.03 E-value=24 Score=20.06 Aligned_cols=14 Identities=29% Similarity=0.373 Sum_probs=11.7
Q ss_pred hhhHHHHHHHHHHH
Q 011960 446 DDELYDMGEMLSKM 459 (474)
Q Consensus 446 ~~ef~E~~e~l~~l 459 (474)
++|.+|++|+|.+-
T Consensus 2 eeeyqemlenlrea 15 (26)
T 2dpr_A 2 EEEYQEMLENLREA 15 (26)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 68999999998763
No 29
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=33.05 E-value=13 Score=29.28 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=36.9
Q ss_pred eecchhhHHHHHHH-------HHHHhchhhhccccccceeeccCCChhhHHHHHHHHHHHHhcccC
Q 011960 407 LRSSSAILPFLENR-------LGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 465 (474)
Q Consensus 407 L~n~t~i~~~~~~~-------~~~f~~l~~rr~~~~~~~y~~~G~~~~ef~E~~e~l~~l~~~Y~~ 465 (474)
+.|+++|..+|..+ ++....++-+|. +|.+--=....+.||++.|..|.+++++
T Consensus 30 i~nDssVQsLF~~lt~MH~~Ll~~i~~~ee~R~-----~yE~LQDkL~qi~eAR~ALdaLR~eH~~ 90 (98)
T 3f1i_H 30 ITNDSAVLSLFQSINGMHPQLLELLNQLDERRL-----YYEGLQDKLAQIRDARGALSALREEHRE 90 (98)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56888888888754 455556655665 4433222356788999999999988753
No 30
>4a25_A DPS, ferritin DPS family protein; metal binding protein, detoxification process; 2.00A {Kineococcus radiotolerans}
Probab=21.45 E-value=77 Score=27.47 Aligned_cols=50 Identities=20% Similarity=0.017 Sum_probs=36.2
Q ss_pred eeeecchhhHHHHHHHHHHHhchhhhccccccceeeccCCChhhHHHHHHHHH
Q 011960 405 VRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLS 457 (474)
Q Consensus 405 ~~L~n~t~i~~~~~~~~~~f~~l~~rr~~~~~~~y~~~G~~~~ef~E~~e~l~ 457 (474)
+.+..+..|...|++++..+..|+.+-+.. ||++. |...-..-+.++.+.
T Consensus 17 ~g~~a~~~i~~~Ln~~LAd~~~Ly~k~k~~--HWnV~-G~~F~~lH~~fee~y 66 (169)
T 4a25_A 17 TGFDASSRLNAGLQEVLVDLTALHLQGKQA--HWNIV-GENWRDLHLQLDTLV 66 (169)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHEE-SSSHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhh--ceeeE-CCChHHHHHHHHHHH
Confidence 445667889999999999999997765544 99884 777655555554443
No 31
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=20.85 E-value=1.8e+02 Score=26.86 Aligned_cols=57 Identities=11% Similarity=0.166 Sum_probs=37.8
Q ss_pred HHHHHHHHhhhcCCCCcEEEEEeCCCCchhhHHHHHHHHHHHhCCcceeeeeecCCC
Q 011960 184 ICERLRFFVEESDHIQGFQFVVDDSGGFSAVAADLLENIADEYANTPVLLFAVRSPS 240 (474)
Q Consensus 184 ~~d~iR~~~EeCD~lqGfq~~~s~~gG~sG~~s~lle~L~DEY~~~~i~~~~v~p~~ 240 (474)
+.+.+...++.+.....=.-+.|++.|+|.++..++..+...+|+..+...++-|+.
T Consensus 36 ~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~ 92 (292)
T 2aot_A 36 MDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSA 92 (292)
T ss_dssp HHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCH
T ss_pred HHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCH
Confidence 334455555555422223356799999988888899999999887644446776654
Done!