BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011962
(474 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94AX4|DLD_ARATH D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis
thaliana GN=DLD PE=1 SV=1
Length = 567
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/319 (70%), Positives = 267/319 (83%), Gaps = 2/319 (0%)
Query: 13 SSSKSILSSLRTSKFSTQNTRTRTLITLSSDNSSRNGTPFQLFSASLLPLALAASAGSLA 72
+ SK+ILS LR + ++ +T+ S R P +S+SL PLA+AASA S A
Sbjct: 8 ARSKTILSFLRPCRQLHSTPKSTGDVTVLSPVKGRRRLP-TCWSSSLFPLAIAASATSFA 66
Query: 73 -MQSQTHPSLCDSSALDSRDVNIGGKGSTEYVVKGSHKEIPQELVDELKAICQDDMTMDY 131
+ SSALDSRD+ +GGK STE VVKG +K++P+EL+ +LK I +D++T DY
Sbjct: 67 YLNLSNPSISESSSALDSRDITVGGKDSTEAVVKGEYKQVPKELISQLKTILEDNLTTDY 126
Query: 132 EERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTL 191
+ERY HGKPQNSFHKAVNIPD++VFPRSE+EVSKI+K C+++KVPI+PYGGATSIEGHTL
Sbjct: 127 DERYFHGKPQNSFHKAVNIPDVVVFPRSEEEVSKILKSCNEYKVPIVPYGGATSIEGHTL 186
Query: 192 SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGG 251
+P GGVCID+SLMK VKALH+EDMDV+VEPGIGW+ELNEYLE YGLFFPLDPGPGA+IGG
Sbjct: 187 APKGGVCIDMSLMKRVKALHVEDMDVIVEPGIGWLELNEYLEEYGLFFPLDPGPGASIGG 246
Query: 252 MCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTL 311
MCATRCSGSLAVRYGTMRDNVI+LKVVL NGDVVKTASRARKSAAGYDLTRLIIGSEGTL
Sbjct: 247 MCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLIIGSEGTL 306
Query: 312 GIITEVTLRLQKIPQHSVM 330
G+ITE+TLRLQKIPQHSV+
Sbjct: 307 GVITEITLRLQKIPQHSVV 325
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 120/145 (82%), Positives = 132/145 (91%)
Query: 330 MRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFH 389
+RKEALWAC+AM P EAMI+DVCVPLS LAELISRSKKELDAS L+CTVIAHAGDGNFH
Sbjct: 423 IRKEALWACYAMAPGHEAMITDVCVPLSHLAELISRSKKELDASSLLCTVIAHAGDGNFH 482
Query: 390 TVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETM 449
T I+FDPS EE R+EAERLN FMVH+ALSM+GTCTGEHG+GTGKMKYLEKELG AL+TM
Sbjct: 483 TCIMFDPSSEEQRREAERLNHFMVHSALSMDGTCTGEHGVGTGKMKYLEKELGIEALQTM 542
Query: 450 KRIKVALDPNNIMNPGKLIPPHICF 474
KRIK LDPN+IMNPGKLIPPH+CF
Sbjct: 543 KRIKKTLDPNDIMNPGKLIPPHVCF 567
>sp|Q12627|DLD1_KLULA D-lactate dehydrogenase [cytochrome], mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DLD1 PE=3
SV=2
Length = 576
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 160/263 (60%), Gaps = 21/263 (7%)
Query: 68 AGSLAMQSQTHPSLCDSSALDSRDVNIGGKGSTEYVVKGSHKEIPQELVDELK------A 121
A +L Q + S+ D S D++ S EY K + + EL D L+
Sbjct: 65 AYALGSQFEKEKSVSDLSIARLEDLD-----SPEYCDKETFAKALVELKDVLENDPENFT 119
Query: 122 ICQDDMTMDYEERYIHGKPQNSFHKAVNI-PDIIVFPRSEDEVSKIVKCCDKHKVPIIPY 180
+ +DD+ + + NS H N P+I+++PR+ ++VSK++K C K+ +P+IP+
Sbjct: 120 VAKDDLDAHSDTYF------NSHHAEANQRPEIVLYPRNTEDVSKLLKICHKYSIPVIPF 173
Query: 181 GGATSIEGHTLSPNGGVCIDLSLMK---SVKALHIEDMDVVVEPGIGWMELNEYLEPYGL 237
G TS+EGH L G C+ L + K + L+ ED+DVVV+ G+ W ELNEYL +GL
Sbjct: 174 SGGTSLEGHFLPTRPGSCVVLDISKYLNKIIQLNKEDLDVVVQGGVPWEELNEYLNDHGL 233
Query: 238 FFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAG 297
F DPGPGA I G A CSG+ A RYGTM++NV+N+ + +A+G +VKT R RKS+AG
Sbjct: 234 LFGCDPGPGAQIAGCIANSCSGTNAYRYGTMKENVVNITMCMADGTIVKTKRRPRKSSAG 293
Query: 298 YDLTRLIIGSEGTLGIITEVTLR 320
Y+L LIIGSEGTLGI+TE T++
Sbjct: 294 YNLNGLIIGSEGTLGIVTEATIK 316
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 7/142 (4%)
Query: 331 RKEALWACF----AMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDG 386
RK ALW+ P +DV VP+S A++I+ +K+E++AS L+ +++ HAGDG
Sbjct: 429 RKVALWSTIDTGRKTNPDANIWTTDVAVPISKFADVINATKEEMNASGLLTSLVGHAGDG 488
Query: 387 NFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGAL 446
NFH I+++ E R+ AE + MV A+ EGTCTGEHG+G GK YL +E+G +
Sbjct: 489 NFHAFIIYNT---EQRKTAETIVENMVKRAIDAEGTCTGEHGVGIGKRDYLLEEVGEDTV 545
Query: 447 ETMKRIKVALDPNNIMNPGKLI 468
M+++K+ALDP I+NP K+
Sbjct: 546 AVMRKLKLALDPKRILNPDKIF 567
>sp|Q7TNG8|LDHD_MOUSE Probable D-lactate dehydrogenase, mitochondrial OS=Mus musculus
GN=Ldhd PE=1 SV=1
Length = 484
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 148/232 (63%), Gaps = 6/232 (2%)
Query: 102 YVVKGSHKEIPQELVDELKAIC-QDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSE 160
+ +GS + Q+ V+ LKA+ ++ R HG + S H+ PD +V+P++
Sbjct: 18 FCSRGSQGGLSQDFVEALKAVVGSPHVSTASAVREQHGHDE-SMHRC-QPPDAVVWPQNV 75
Query: 161 DEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVE 220
D+VS++ C VPIIP+G T +EG + GGVCI+L+ M + L+ ED VVVE
Sbjct: 76 DQVSRVASLCYNQGVPIIPFGTGTGVEGGVCAVQGGVCINLTHMDQITELNTEDFSVVVE 135
Query: 221 PGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLA 280
PG+ LN +L GL+FP+DPG A++ GM AT SG+ AVRYGTMRDNVINL+VVL
Sbjct: 136 PGVTRKALNTHLRDSGLWFPVDPGADASLCGMAATGASGTNAVRYGTMRDNVINLEVVLP 195
Query: 281 NGDVVKTASRA---RKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSV 329
+G ++ TA R RKSAAGY+LT L +GSEGTLGIIT TLRL P+ +V
Sbjct: 196 DGRLLHTAGRGRHYRKSAAGYNLTGLFVGSEGTLGIITSTTLRLHPAPEATV 247
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 91/138 (65%)
Query: 331 RKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHT 390
R A +A A+ P +A +DVCVP+S L E++ +K+E+ AS L ++ H GDGNFH
Sbjct: 347 RHNAWYAALALSPGSKAYSTDVCVPISRLPEILVETKEEIKASKLTGAIVGHVGDGNFHC 406
Query: 391 VILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMK 450
++L DP E+++ + + AL++ GTCTGEHGIG GK + L++E+G +ETM+
Sbjct: 407 ILLVDPDDAEEQRRVKAFAENLGRRALALGGTCTGEHGIGLGKRQLLQEEVGPVGVETMR 466
Query: 451 RIKVALDPNNIMNPGKLI 468
++K LDP +MNPGK++
Sbjct: 467 QLKNTLDPRGLMNPGKVL 484
>sp|P32891|DLD1_YEAST D-lactate dehydrogenase [cytochrome] 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=DLD1 PE=1 SV=2
Length = 587
Score = 186 bits (471), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGG--VCIDLS-LMKSV 207
P II+FP + +EVSKI+K C + +P++P+ G TS+EGH L G + +DLS M +V
Sbjct: 151 PRIILFPHTTEEVSKILKICHDNNMPVVPFSGGTSLEGHFLPTRIGDTITVDLSKFMNNV 210
Query: 208 KALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGT 267
D+D+ V+ G+ W +LN+YL +GL F DPGPGA IGG A CSG+ A RYGT
Sbjct: 211 VKFDKLDLDITVQAGLPWEDLNDYLSDHGLMFGCDPGPGAQIGGCIANSCSGTNAYRYGT 270
Query: 268 MRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQ 326
M++N+IN+ +VL +G +VKT R RKS+AGY+L L +GSEGTLGI+TE T++ P+
Sbjct: 271 MKENIINMTIVLPDGTIVKTKKRPRKSSAGYNLNGLFVGSEGTLGIVTEATVKCHVKPK 329
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 331 RKEALWACF----AMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDG 386
RK ALW+ + + S + +DV VP+S ++I +KK++ AS LI ++ HAGDG
Sbjct: 436 RKVALWSVLDADKSKDKSAKIWTTDVAVPVSQFDKVIHETKKDMQASKLINAIVGHAGDG 495
Query: 387 NFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGAL 446
NFH I++ E+ + +L MV AL+ EGTCTGEHG+G GK +YL +ELG +
Sbjct: 496 NFHAFIVY--RTPEEHETCSQLVDRMVKRALNAEGTCTGEHGVGIGKREYLLEELGEAPV 553
Query: 447 ETMKRIKVALDPNNIMNPGKLI 468
+ M++IK+A+DP IMNP K+
Sbjct: 554 DLMRKIKLAIDPKRIMNPDKIF 575
>sp|Q86WU2|LDHD_HUMAN Probable D-lactate dehydrogenase, mitochondrial OS=Homo sapiens
GN=LDHD PE=1 SV=1
Length = 507
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 150/255 (58%), Gaps = 29/255 (11%)
Query: 102 YVVKGSHKEIPQELVDELKAICQ-DDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSE 160
Y + + E+ ++ V+ LKA+ ++ R HG+ + S H+ PD +V+P++
Sbjct: 18 YCSQKAKGELCRDFVEALKAVVGGSHVSTAAVVREQHGRDE-SVHRC-EPPDAVVWPQNV 75
Query: 161 DEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVE 220
++VS++ C + VPIIP+G T +EG + GGVC++L+ M + L+ ED VVVE
Sbjct: 76 EQVSRLAALCYRQGVPIIPFGTGTGLEGGVCAVQGGVCVNLTHMDRILELNQEDFSVVVE 135
Query: 221 PGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLA 280
PG+ LN +L GL+FP+DPG A++ GM AT SG+ AVRYGTMRDNV+NL+VVL
Sbjct: 136 PGVTRKALNAHLRDSGLWFPVDPGADASLCGMAATGASGTNAVRYGTMRDNVLNLEVVLP 195
Query: 281 NGDVVKTASRA--------------------------RKSAAGYDLTRLIIGSEGTLGII 314
+G ++ TA R RKSAAGY+LT L +GSEGTLG+I
Sbjct: 196 DGRLLHTAGRGRHFRFGFWPEIPHHTAWYSPCVSLGRRKSAAGYNLTGLFVGSEGTLGLI 255
Query: 315 TEVTLRLQKIPQHSV 329
T TLRL P+ +V
Sbjct: 256 TATTLRLHPAPEATV 270
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 90/138 (65%)
Query: 331 RKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHT 390
R A +A A P + +DVCVP+S L E++ ++K++L+AS L +++ H GDGNFH
Sbjct: 370 RHNAWYAALATRPGCKGYSTDVCVPISRLPEIVVQTKEDLNASGLTGSIVGHVGDGNFHC 429
Query: 391 VILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMK 450
++L +P E+ + + AL++ GTCTGEHGIG GK + L++E+G +ETM+
Sbjct: 430 ILLVNPDDAEELGRVKAFAEQLGRRALALHGTCTGEHGIGMGKRQLLQEEVGAVGVETMR 489
Query: 451 RIKVALDPNNIMNPGKLI 468
++K LDP +MNPGK++
Sbjct: 490 QLKAVLDPQGLMNPGKVL 507
>sp|P94535|GLCD_BACSU Glycolate oxidase subunit GlcD OS=Bacillus subtilis (strain 168)
GN=glcD PE=3 SV=1
Length = 470
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 6/206 (2%)
Query: 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVK 208
++PD ++ PR+ DE+S+I+ C +H+VPI+P G T++ G T GG+ + M +
Sbjct: 39 SMPDAVIAPRNTDEISRILTICSEHRVPIVPRGSGTNLCGGTCPTEGGLVLLFKHMNQIL 98
Query: 209 ALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPG--ATIGGMCATRCSGSLAVRYG 266
+ E++ V+PG+ +++ +E GLF+P DP +TIGG G ++YG
Sbjct: 99 EIDEENLTATVQPGVITLDMIRAVESKGLFYPPDPSSMKISTIGGNINENSGGLRGLKYG 158
Query: 267 TMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQ 326
RD VI L+VVLANGD+++T + K AGYDLTRL +GSEGTLGI+TE ++L P+
Sbjct: 159 VTRDYVIGLEVVLANGDIIRTGGKLAKDVAGYDLTRLFVGSEGTLGIVTEAIVKLVPKPE 218
Query: 327 HSVMRKEALWACFAMEPSFEAMISDV 352
K+ L A + + +SD+
Sbjct: 219 T----KKTLLALYENIDAAAQTVSDI 240
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Query: 331 RKEALWACFAMEPSFEAMISDVCVPLSCLAEL---ISRSKKELDASPLICTVIAHAGDGN 387
R+ AL A ++P+ ++ D VP S +A + I+ + D S ICT HAGDGN
Sbjct: 323 RRSALSALARLKPT--TILEDATVPRSEIANMVKAINDIAAKYDIS--ICT-FGHAGDGN 377
Query: 388 FHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALE 447
H D +++ + E+ + A+ + GT TGEHG+G K YLE +L ++
Sbjct: 378 LHPTCTTDIRNKDEMERVEQAFAEIFEKAIELGGTITGEHGVGEMKAPYLEMKLKKEGID 437
Query: 448 TMKRIKVALDPNNIMNPGKL 467
MK +K A DP NI+NPGK+
Sbjct: 438 AMKALKAAFDPRNILNPGKM 457
>sp|Q9V778|ADAS_DROME Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster
GN=CG10253 PE=2 SV=1
Length = 631
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 14/224 (6%)
Query: 115 LVDELKAICQDDMTMDYEERYI--HGKPQNSF-----HKAVNIPDIIVFPRSEDEVSKIV 167
+ ELK Q D + + +R + HG+ N HK IPD++V+PR DEV ++V
Sbjct: 116 FLHELKGTTQVDYSAEGIDRLVRCHGQTLNDIYSLWHHKFRRIPDLVVWPRCHDEVVQLV 175
Query: 168 KCCDKHKVPIIPYGGATSIEGHTLSPNGG---VC-IDLSLMKSVKALHIEDMDVVVEPGI 223
+ +KH V ++P+GG TS+ G P +C +D S M + L+ E++ V E GI
Sbjct: 176 RLANKHNVMLVPFGGGTSVSGAITCPQNESRMICALDTSQMNRLLWLNRENLTVCFESGI 235
Query: 224 GWMELNEYLEPYGLFFPLDPGPG--ATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLAN 281
+L L GL +P +T+GG ATR SG YG + D V+ +++V +
Sbjct: 236 VGQDLERVLRSEGLTVGHEPDSYEFSTLGGWVATRASGMKKNVYGNIEDLVVRVRMVTPS 295
Query: 282 GDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIP 325
G + + S R S G D +I+GSEGTLG+ITEV L+++ +P
Sbjct: 296 GTLERECSAPRVS-CGPDFNHVILGSEGTLGVITEVVLKVRPLP 338
>sp|Q50685|Y2280_MYCTU Uncharacterized FAD-linked oxidoreductase Rv2280 OS=Mycobacterium
tuberculosis GN=Rv2280 PE=1 SV=1
Length = 459
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 10/217 (4%)
Query: 114 ELVDELKAICQDDMTMDY-EERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDK 172
E+V + D + DY + + G PQ + A P + +EV++++K +
Sbjct: 10 EIVGNANLLTGDAIPEDYAHDEELTGPPQKPAYAAK--------PATPEEVAQLLKAASE 61
Query: 173 HKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYL 232
+ VP+ G + G GG+ I M V + + VV+PG+ +L+
Sbjct: 62 NGVPVTARGSGCGLSGAARPVEGGLLISFDRMNKVLEVDTANQVAVVQPGVALTDLDAAT 121
Query: 233 EPYGLFFPLDPGP-GATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRA 291
GL + + PG +++GG T G AV+YG R NV+ L+ VL G++++T R
Sbjct: 122 ADTGLRYTVYPGELSSSVGGNVGTNAGGMRAVKYGVARHNVLGLQAVLPTGEIIRTGGRM 181
Query: 292 RKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHS 328
K + GYDLT+LIIGSEGTL ++TEV ++L H+
Sbjct: 182 AKVSTGYDLTQLIIGSEGTLALVTEVIVKLHPRLDHN 218
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 331 RKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHT 390
R++A WA A+ I D VP + + + +S ++ A+ HAGDGN H
Sbjct: 327 REKAFWAAKALGADD---IIDTVVPRASMPKFLSTARGLAAAADGAAVGCGHAGDGNVHM 383
Query: 391 VIL-FDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETM 449
I DP K++ +L + A+ + G +GEHG+G K Y + + M
Sbjct: 384 AIACKDPEKKK------KLMTDIFALAMELGGAISGEHGVGRAKTGYFLELEDPVKISLM 437
Query: 450 KRIKVALDPNNIMNPG 465
+RIK + DP I+NPG
Sbjct: 438 RRIKQSFDPAGILNPG 453
>sp|P39976|DLD3_YEAST D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DLD3 PE=1 SV=1
Length = 496
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 137/276 (49%), Gaps = 19/276 (6%)
Query: 152 DIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALH 211
++I+ P S D+VSKI+K C+ K+ ++P GG T + G ++ + + L M V+
Sbjct: 69 NLILLPNSTDKVSKIMKYCNDKKLAVVPQGGNTDLVGASVPVFDEIVLSLRNMNKVRDFD 128
Query: 212 IEDMDVVVEPGIGWMELNEYLEPYGLFFPLD--PGPGATIGGMCATRCSGSLAVRYGTMR 269
+ G+ + +++L + FPLD +GG+ +T G +RYG++
Sbjct: 129 PVSGTFKCDAGVVMRDAHQFLHDHDHIFPLDLPSRNNCQVGGVVSTNAGGLNFLRYGSLH 188
Query: 270 DNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSV 329
NV+ L+VVL NG+++ + RK GYDL +L IG+EGT+G++T V++ P+
Sbjct: 189 GNVLGLEVVLPNGEIISNINALRKDNTGYDLKQLFIGAEGTIGVVTGVSIVAAAKPK--- 245
Query: 330 MRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTV-------IAH 382
AL A F +F+ + S L+E++S + + +D + CT+
Sbjct: 246 ----ALNAVFFGIENFDTVQKLFVKAKSELSEILS-AFEFMDRGSIECTIEYLKDLPFPL 300
Query: 383 AGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALS 418
NF+ +L + S R + E+L F+ T S
Sbjct: 301 ENQHNFY--VLIETSGSNKRHDDEKLTAFLKDTTDS 334
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 381 AHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIG---TGKMKYL 437
H GDGN H I +E +Q + L F+ S +G+ + EHGIG GK+ Y
Sbjct: 412 GHVGDGNIHLNI---AVREFTKQIEDLLEPFVYEYIASKKGSISAEHGIGFHKKGKLHYT 468
Query: 438 EKELGTGALETMKRIKVALDPNNIMNPGKLI 468
++ + MK IK DPN I+NP K I
Sbjct: 469 RSDI---EIRFMKDIKNHYDPNGILNPYKYI 496
>sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis
thaliana GN=D2HGDH PE=1 SV=3
Length = 559
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 116 VDELKAICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKV 175
V K I + ++ +ER + + HK +++ P++ EVS+I++ CD ++
Sbjct: 100 VSYFKEILGEKNVVEDKER-LETANTDWMHKYKGSSKLMLLPKNTQEVSQILEYCDSRRL 158
Query: 176 PIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPY 235
++P GG T + G ++ V +++ LM + + +V E G L +L+
Sbjct: 159 AVVPQGGNTGLVGGSVPVFDEVIVNVGLMNKILSFDEVSGVLVCEAGCILENLATFLDTK 218
Query: 236 GLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARK 293
G PLD G + IGG +T G +RYG++ V+ L+ V ANG+V+ RK
Sbjct: 219 GFIMPLDLGAKGSCHIGGNVSTNAGGLRLIRYGSLHGTVLGLEAVTANGNVLDMLGTLRK 278
Query: 294 SAAGYDLTRLIIGSEGTLGIITEVTLRLQ 322
GYDL L IGSEG+LGI+T+V++ Q
Sbjct: 279 DNTGYDLKHLFIGSEGSLGIVTKVSILTQ 307
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 381 AHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKE 440
H GDGN H I + E + + + ++ G+ + EHG+G K +
Sbjct: 468 GHLGDGNLHLNI---SAAEYNDKLLGLIEPYVYEWTSKHRGSISAEHGLGVMKANEIFYS 524
Query: 441 LGTGALETMKRIKVALDPNNIMNPGKLIP 469
+ M IK LDP I+NP K++P
Sbjct: 525 KSPETVALMASIKKLLDPKGILNPYKVLP 553
>sp|A1L258|D2HDH_DANRE D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Danio rerio
GN=d2hgdh PE=2 SV=1
Length = 533
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 10/224 (4%)
Query: 152 DIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALH 211
D+++ P++ + VS+I++ C++ + + P GG T + G ++ + + SLM V A
Sbjct: 112 DVLLRPKTTEGVSQILRYCNERNLAVCPQGGNTGLVGGSVPVFDEIILSTSLMNQVFAFD 171
Query: 212 IEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMR 269
+ + G L+ YLE PLD G + IGG +T G +RYG++R
Sbjct: 172 NISGILTCQAGCVLENLSHYLEERDFIMPLDLGAKGSCHIGGNVSTNAGGLRLLRYGSLR 231
Query: 270 DNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSV 329
V+ L+VVLA+G V+ + RK GYDL +L IGSEGTLG+IT V++ + P+
Sbjct: 232 GTVLGLEVVLADGHVLNCLATLRKDNTGYDLKQLFIGSEGTLGVITAVSILCPRKPK--- 288
Query: 330 MRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDAS 373
A+ F SF+ ++ L E++S + + LDAS
Sbjct: 289 ----AVNVAFLGCSSFQQLLETFQCCRGMLGEILS-AFEFLDAS 327
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 351 DVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNR 410
D+ +P+ + +L+ ++ L H GDGN H I PSK+ D A +
Sbjct: 414 DISLPVEKIYDLVQDMRRHLGGMAKNVVGYGHVGDGNLHLNIT-SPSKDFDLLAA--IEP 470
Query: 411 FMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKLIPP 470
++ +G+ + EHG+G K Y+ + A+ M IK LDP I+NP K +P
Sbjct: 471 YVYEWTSQWKGSISAEHGLGLKKRNYIYYSKPSEAVALMGSIKAMLDPKGILNPYKTLPD 530
Query: 471 HI 472
+I
Sbjct: 531 NI 532
>sp|P84850|D2HDH_RAT D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=D2hgdh PE=3 SV=1
Length = 535
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 2/169 (1%)
Query: 153 IIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHI 212
+++ P++ +EVS+I++ C K + + P GG T + G ++ V + +LM V + H
Sbjct: 116 VLLRPQTSEEVSQILRHCYKRNLAVNPQGGNTGMVGGSVPVFDEVILSTALMNQVISFHD 175
Query: 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRD 270
+V + G EL+ Y++ PLD G + IGG AT G +RYG++R
Sbjct: 176 VSGILVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRG 235
Query: 271 NVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTL 319
V+ L+VVLA+G ++ + RK GYDL ++ IGSEGTLG+IT V++
Sbjct: 236 TVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSI 284
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 18/184 (9%)
Query: 294 SAAGYDLTRLIIGSEGTL--GIITEVTLRLQKIPQHSVMRKEALWACF-----AMEPSFE 346
S+AG+D +L E L G++ + T+ + + + LWA A+
Sbjct: 359 SSAGHDAEKLTNVLEQVLNSGLVIDGTMATDQ------RKVQMLWALRERITEALSRDGY 412
Query: 347 AMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEA- 405
D+ +P+ L +L+ + L H GDGN H + + E QE
Sbjct: 413 VFKYDLSLPVERLYDLVIDLRTRLGPRAKHVVGYGHLGDGNLH----LNVTAEAFSQELL 468
Query: 406 ERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPG 465
L ++ G+ + EHG+G K L A++ M+++K LDP I+NP
Sbjct: 469 GALEPYVYAWTAEQRGSVSAEHGLGFKKKNVLGYSKPPVAVKLMQQLKAMLDPKGILNPY 528
Query: 466 KLIP 469
K +P
Sbjct: 529 KTLP 532
>sp|Q1JPD3|D2HDH_BOVIN D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Bos taurus
GN=D2HGDH PE=2 SV=2
Length = 544
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 2/169 (1%)
Query: 153 IIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHI 212
+++ PR+ EV+ I++ C + + + P GG T + G + + + +LM V + H
Sbjct: 125 VLLRPRTTQEVAHILRYCHERNLAVNPQGGNTGMVGGSTPVFDEIILSTALMNQVLSFHD 184
Query: 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRD 270
+V + G L++Y+E G PLD G + IGG AT G +RYG++R
Sbjct: 185 VSGVLVCQAGCVLEALSQYVEERGFIMPLDLGAKGSCHIGGNVATNAGGLRVLRYGSLRG 244
Query: 271 NVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTL 319
V+ L+VVLA+G V+ + RK GYDL +L IGSEGTLG+IT V++
Sbjct: 245 TVLGLEVVLADGTVLNCLTSLRKDNTGYDLKQLFIGSEGTLGVITAVSI 293
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 351 DVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNR 410
D+ +PL L +L+ + L S H GDGN H + S+ L
Sbjct: 426 DLSLPLDRLYDLVGDLRARLGPSAKHVVGYGHLGDGNLHLNVT---SEAFSTSLLGALEP 482
Query: 411 FMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKLIPP 470
++ G+ + EHG+G K L AL+ M+++K LDP I+NP K++P
Sbjct: 483 YVYEWTAGQRGSVSAEHGLGFKKKDVLGYSKPPEALQLMRQLKALLDPKGILNPYKMLPT 542
Query: 471 H 471
H
Sbjct: 543 H 543
>sp|Q7XI14|D2HDH_ORYSJ Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza
sativa subsp. japonica GN=D2HGDH PE=3 SV=1
Length = 559
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Query: 116 VDELKAICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKV 175
V K+I D + E+R + + K +++ P+S EVSKI+ C+ ++
Sbjct: 101 VSYFKSILGDSGVVQDEDR-VSVANMDWMGKYKGSSQLLLLPKSTAEVSKILSYCNSRRL 159
Query: 176 PIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPY 235
++P GG T + G ++ V I L M + + + E G L+ Y+E
Sbjct: 160 AVVPQGGNTGLVGGSVPVYDEVIISLGGMDKIITFDNVNGILTCEAGCVLENLSSYVENK 219
Query: 236 GLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARK 293
G PLD G + IGG +T G +RYG++ +V+ L+VVLA+G V+ + RK
Sbjct: 220 GFIMPLDLGAKGSCHIGGNISTNAGGLRFIRYGSLHGSVLGLEVVLADGTVLDMLTTLRK 279
Query: 294 SAAGYDLTRLIIGSEGTLGIITEVT-LRLQKIPQHSV 329
GYDL L IGSEG+LGI+T++ L K+P +V
Sbjct: 280 DNTGYDLKHLFIGSEGSLGIVTKIAILTPAKLPSTNV 316
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 351 DVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNR 410
D+ +P+ L +++ + + + H GDGN H IL +K D+ A+ +
Sbjct: 441 DLSIPVEKLYDIVEEMRSRVGDMGQVLGY-GHLGDGNLHLNIL--STKYSDKMLAQ-IEP 496
Query: 411 FMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKLIPP 470
F+ G+ + EHG+G K + + + A++ M IK LDPN+I+NP K++P
Sbjct: 497 FVYEWTSKQRGSISAEHGLGLMKAEKIHYSKSSEAVQLMASIKKLLDPNSILNPYKVLPQ 556
Query: 471 HI 472
+
Sbjct: 557 SV 558
>sp|Q8CIM3|D2HDH_MOUSE D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Mus musculus
GN=D2hgdh PE=2 SV=3
Length = 535
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 2/169 (1%)
Query: 153 IIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHI 212
+++ P++ +EVS+I++ C K + + P GG T + G ++ V + +LM V + H
Sbjct: 116 VLLRPQTSEEVSQILRHCYKRNLAVNPQGGNTGMVGGSVPVFDEVILSTALMNQVISFHD 175
Query: 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRD 270
+V + G EL+ Y++ PLD G + IGG AT G +RYG++R
Sbjct: 176 VSGILVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRG 235
Query: 271 NVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTL 319
V+ L+VVLA+G ++ + RK GYDL ++ IGSEGTLG+IT V++
Sbjct: 236 TVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSI 284
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
Query: 294 SAAGYDLTRLIIGSEGTL--GIITEVTLRLQKIPQHSVMRKEALWACF-----AMEPSFE 346
S+AG+D +L E L G++T+ T+ + + + LWA A+
Sbjct: 359 SSAGHDAEKLTNVLEQVLNSGLVTDGTMATDQ------RKVQMLWALRERITEALSRDGY 412
Query: 347 AMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAE 406
D+ +P+ L +L+ + L H GDGN H + ++ R+
Sbjct: 413 VFKYDLSLPVERLYDLVIDLRTRLGPRAKHVVGYGHLGDGNLHLNV---TAEAFSRELLG 469
Query: 407 RLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGK 466
L ++ G+ + EHG+G K L A+ M+++K LDP I+NP K
Sbjct: 470 ALEPYVYAWTAEQRGSVSAEHGLGFKKKDVLGYSKPPVAVTLMQQLKAMLDPEGILNPYK 529
Query: 467 LIP 469
+P
Sbjct: 530 TLP 532
>sp|B8B7X6|D2HDH_ORYSI Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza
sativa subsp. indica GN=D2HGDH PE=3 SV=1
Length = 559
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Query: 116 VDELKAICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKV 175
V K+I D + E+R + + K +++ P+S EVSKI+ C+ ++
Sbjct: 101 VSYFKSILGDSGVVQDEDR-VSVANMDWMGKYKGSSQLLLLPKSTAEVSKILSYCNSRRL 159
Query: 176 PIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPY 235
++P GG T + G ++ V I L M + + + E G L+ Y+E
Sbjct: 160 AVVPQGGNTGLVGGSVPVYDEVIISLGGMDKIITFDNVNGILTCEAGCVLENLSSYVENK 219
Query: 236 GLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARK 293
G PLD G + IGG +T G +RYG++ +V+ L+VVLA+G V+ + RK
Sbjct: 220 GFIMPLDLGAKGSCHIGGNISTNAGGLRFIRYGSLHGSVLGLEVVLADGTVLDMLTTLRK 279
Query: 294 SAAGYDLTRLIIGSEGTLGIITEVT-LRLQKIPQHSV 329
GYDL L IGSEG+LGI+T++ L K+P +V
Sbjct: 280 DNTGYDLKHLFIGSEGSLGIVTKIAILTPAKLPSTNV 316
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 351 DVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNR 410
D+ +P+ L +++ + + + H GDGN H IL +K D+ A+ +
Sbjct: 441 DLSIPVEKLYDIVEEMRSRVGDMGQVLGY-GHLGDGNLHLNIL--STKYSDKMLAQ-IEP 496
Query: 411 FMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKLIPP 470
F+ G+ + EHG+G K + + A++ M IK LDPN+I+NP K++P
Sbjct: 497 FVYEWTSKQRGSISAEHGLGLMKADKIHYSKSSEAVQLMTSIKKLLDPNSILNPYKVLPQ 556
Query: 471 HI 472
+
Sbjct: 557 SV 558
>sp|Q8N465|D2HDH_HUMAN D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Homo sapiens
GN=D2HGDH PE=1 SV=3
Length = 521
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 26/283 (9%)
Query: 153 IIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHI 212
+++ PR+ +EVS I++ C + + + P GG T + G ++ + + + M V + H
Sbjct: 102 VLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHS 161
Query: 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRD 270
+V + G EL+ Y+E PLD G + IGG AT G +RYG++
Sbjct: 162 VSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHG 221
Query: 271 NVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVM 330
V+ L+VVLA+G V+ + RK GYDL +L IGSEGTLGIIT V++ P+
Sbjct: 222 TVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPR---- 277
Query: 331 RKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICT--------VIAH 382
A+ F P F ++ L E++S + + +DA +C + +
Sbjct: 278 ---AVNVAFLGCPGFAEVLQTFSTCKGMLGEILS-AFEFMDA---VCMQLVGRHLHLASP 330
Query: 383 AGDGNFHTVILFDPSKEEDRQEAERLNRFMVH---TALSMEGT 422
+ F+ +L + S +AE+L F+ H + L +GT
Sbjct: 331 VQESPFY--VLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGT 371
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 351 DVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFH---TVILFDPSKEEDRQEAER 407
D+ +P+ L ++++ + L H GDGN H T F PS
Sbjct: 403 DLSLPVERLYDIVTDLRARLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPSL------LAA 456
Query: 408 LNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKL 467
L + +G+ + EHG+G K L GAL+ M+++K LDP I+NP K
Sbjct: 457 LEPHVYEWTAGQQGSVSAEHGVGFRKRDVLGYSKPPGALQLMQQLKALLDPKGILNPYKT 516
Query: 468 IP 469
+P
Sbjct: 517 LP 518
>sp|P46681|DLD2_YEAST D-lactate dehydrogenase [cytochrome] 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=DLD2 PE=1 SV=1
Length = 530
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 21/220 (9%)
Query: 153 IIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALH- 211
+++ P+S ++VS I+ C+ K+ ++P GG T + G G V I L+ S+ L+
Sbjct: 104 LVLRPKSVEKVSLILNYCNDEKIAVVPQGGNTGLVG------GSVPIFDELILSLANLNK 157
Query: 212 IEDMDVV-----VEPGIGWMELNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVR 264
I D D V + G+ N Y+ FPLD G + +GG+ AT G +R
Sbjct: 158 IRDFDPVSGILKCDAGVILENANNYVMEQNYMFPLDLGAKGSCHVGGVVATNAGGLRLLR 217
Query: 265 YGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKI 324
YG++ +V+ L+VV+ NG +V + RK GYDL +L IGSEGT+GIIT V++
Sbjct: 218 YGSLHGSVLGLEVVMPNGQIVNSMHSMRKDNTGYDLKQLFIGSEGTIGIITGVSIL---- 273
Query: 325 PQHSVMRKEALWACFAMEPSFEAMISDVCVPLSCLAELIS 364
+V + +A + SFE + L+E++S
Sbjct: 274 ---TVPKPKAFNVSYLSVESFEDVQKVFVRARQELSEILS 310
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 351 DVCVPLSCLAELISRSKKELDASPLI---------CTVIAHAGDGNFHTVILFDPSKEED 401
DV +PL L L+ + L + L+ H GDGN H + +E +
Sbjct: 407 DVSLPLKDLYSLVEATNARLSEAELVGDSPKPVVGAIGYGHVGDGNLHLNV---AVREYN 463
Query: 402 RQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNI 461
+ + L F+ S G+ + EHG+G K Y+ ++ MK +KV DPN I
Sbjct: 464 KNIEKTLEPFVYEFVSSKHGSVSAEHGLGFQKKNYIGYSKSPEEVKMMKDLKVHYDPNGI 523
Query: 462 MNPGKLI 468
+NP K I
Sbjct: 524 LNPYKYI 530
>sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus
musculus GN=Agps PE=1 SV=1
Length = 645
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 40/315 (12%)
Query: 150 IPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGG----VCIDLSLMK 205
IPDI+V+P D+V KIV K+ + IIP GG TS+ + P + +D S M
Sbjct: 192 IPDIVVWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMN 251
Query: 206 SVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAV 263
+ + ++ VE GI +L L+ G +P +T+GG +TR SG
Sbjct: 252 RILWVDENNLTAHVEAGITGQDLERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKN 311
Query: 264 RYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323
YG + D V+++K+V G V++ +S+ + + G D+ I+GSEGTLG+ITE T++++
Sbjct: 312 IYGNIEDLVVHMKMVTPRG-VIEKSSQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRP 370
Query: 324 IPQHSVMRKEALWACFAMEPSFEAMIS-------DVCVPLSCLAELISRSKKELDAS--P 374
P++ A P+FE ++ C P S L+ + + + P
Sbjct: 371 TPEYQKYGSVAF-------PNFEQGVACLREIAKQRCAPASI--RLMDNQQFQFGHALKP 421
Query: 375 LICTVIAHAGDG--NFHTVIL--FDPSK--------EEDRQEAERLNRFMVHTALSMEGT 422
+ ++ DG F+ FDP++ E DR++ + + + A G
Sbjct: 422 QVSSIFTSFLDGLKKFYITKFKGFDPNQISVATLLFEGDREKVLQHEKQVYDIAAKFGGL 481
Query: 423 CTGEHGIGTGKMKYL 437
GE G+ YL
Sbjct: 482 AAGED---NGQRGYL 493
>sp|P97275|ADAS_CAVPO Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia
porcellus GN=AGPS PE=1 SV=1
Length = 658
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 144/315 (45%), Gaps = 40/315 (12%)
Query: 150 IPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGG----VCIDLSLMK 205
IPDI+++P D+V KIV K+ + IIP GG TS+ + P + +D S M
Sbjct: 205 IPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMN 264
Query: 206 SVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAV 263
+ + ++ VE GI EL L+ G +P +T+GG +TR SG
Sbjct: 265 RILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKN 324
Query: 264 RYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323
YG + D V+++KVV G V++ + + + + G D+ I+GSEGTLG+ITE T++++
Sbjct: 325 IYGNIEDLVVHMKVVTPRG-VIEKSCQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRP 383
Query: 324 IPQHSVMRKEALWACFAMEPSFEAMIS-------DVCVPLSCLAELISRSKKELDAS--P 374
P++ A P+FE ++ C P S L+ + + + P
Sbjct: 384 TPEYQKYGSVAF-------PNFEQGVACLREIAKQRCAPASI--RLMDNQQFQFGHALKP 434
Query: 375 LICTVIAHAGDG--NFHTVIL--FDPSK--------EEDRQEAERLNRFMVHTALSMEGT 422
+ ++ DG F+ FDP++ E DR++ + + + A G
Sbjct: 435 QVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLFEGDREKVLQHEKQVYDIAAKFGGL 494
Query: 423 CTGEHGIGTGKMKYL 437
GE G+ YL
Sbjct: 495 AAGED---NGQRGYL 506
>sp|O96759|ADAS_DICDI Alkyldihydroxyacetonephosphate synthase OS=Dictyostelium discoideum
GN=eapA PE=1 SV=1
Length = 611
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 18/232 (7%)
Query: 109 KEIPQELVDELKAI-CQDDMTMDYEERYIH--GKPQNSF-----HKAVNIPDIIVFPRSE 160
K+ P E V ELKA D + D R H GK + N PD+IV P S
Sbjct: 92 KQYP-EFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSH 150
Query: 161 DEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGG----VCIDLSLMKSVKALHIEDMD 216
+EV ++V+ K+ V IIP GG ++I G + P V ID+ M V + +M
Sbjct: 151 EEVERLVQLAHKYNVVIIPMGGGSNIVG-AIEPVSNERFTVSIDMRRMNKVLWVDRREMT 209
Query: 217 VVVEPGIGWMELNEYLEPYGLFFPLDPG--PGATIGGMCATRCSGSLAVRYGTMRDNVIN 274
++ GI EL + L G+ DP +T+GG AT SG + +YG + D ++
Sbjct: 210 ACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVS 269
Query: 275 LKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQ 326
+ V G + +S AG + +I+GSEGTLGIITE +++ +PQ
Sbjct: 270 FRTVTPTGTL--ELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQ 319
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 376 ICTVIAHAGDGNFHTVILFDPSKEEDRQEAERL--NRFMVHTALSMEGTCTGEHGIGTGK 433
IC I+H +F + E++ A+ + + M G+ + HG+G
Sbjct: 493 ICAHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLSHHHGVGYEH 552
Query: 434 MKYLEKELGTGALETMKRIKVALDPNNIMNPGKLIP 469
+ ++ + G + + +K +DP +I NP KLIP
Sbjct: 553 VPWMTRYATRGWINVYRSLKETIDPKDICNPRKLIP 588
>sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo
sapiens GN=AGPS PE=1 SV=1
Length = 658
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 143/315 (45%), Gaps = 40/315 (12%)
Query: 150 IPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGG----VCIDLSLMK 205
IPDI+++P D+V KIV K+ + IIP GG TS+ + P + +D S M
Sbjct: 205 IPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMN 264
Query: 206 SVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAV 263
+ + ++ VE GI EL L+ G +P +T+GG +TR SG
Sbjct: 265 RILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWVSTRASGMKKN 324
Query: 264 RYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323
YG + D V+++K+V G + K+ R S G D+ I+GSEGTLG+ITE T++++
Sbjct: 325 IYGNIEDLVVHIKMVTPRGIIEKSCQGPRMST-GPDIHHFIMGSEGTLGVITEATIKIRP 383
Query: 324 IPQHSVMRKEALWACFAMEPSFEAMIS-------DVCVPLSCLAELISRSKKELDAS--P 374
+P++ A P+FE ++ C P S L+ + + + P
Sbjct: 384 VPEYQKYGSVAF-------PNFEQGVACLREIAKQRCAPASI--RLMDNKQFQFGHALKP 434
Query: 375 LICTVIAHAGDG--NFHTVIL--FDPSK--------EEDRQEAERLNRFMVHTALSMEGT 422
+ ++ DG F+ FDP++ E DR++ + + + A G
Sbjct: 435 QVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLFEGDREKVLQHEKQVYDIAAKFGGL 494
Query: 423 CTGEHGIGTGKMKYL 437
GE G+ YL
Sbjct: 495 AAGED---NGQRGYL 506
>sp|O45218|ADAS_CAEEL Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans
GN=ads-1 PE=2 SV=1
Length = 597
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 7/183 (3%)
Query: 150 IPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPN----GGVCIDLSLMK 205
+PDI+V+P+SE E+ KI++ H IIP GG TS+ +P + +D++L+
Sbjct: 134 LPDIVVWPKSEHEIVKIIEGAMSHNCAIIPIGGGTSVTNALDTPETEKRAVISMDMALLD 193
Query: 206 SVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAV 263
+ + E++ + GI L L G +P +T+GG +TR SG
Sbjct: 194 KILWIDRENLTCRAQAGIVGQSLERQLNKKGFTCGHEPDSIEFSTLGGWVSTRASGMKKN 253
Query: 264 RYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323
+YG + D V++L V G + K R S +G D+ ++I+GSEGTLG+++EVT+++
Sbjct: 254 KYGNIEDLVVHLNFVCPKGIIQKQCQVPRMS-SGPDIHQIILGSEGTLGVVSEVTIKIFP 312
Query: 324 IPQ 326
IP+
Sbjct: 313 IPE 315
>sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus
norvegicus GN=Agps PE=2 SV=1
Length = 644
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 40/315 (12%)
Query: 150 IPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGG----VCIDLSLMK 205
IPDI+V+P D+V KIV K+ + IIP GG TS+ + P + +D S M
Sbjct: 191 IPDIVVWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMN 250
Query: 206 SVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAV 263
+ + ++ VE GI +L L+ G +P + +GG +TR SG
Sbjct: 251 RILWVDENNLTAHVEAGITGQDLERQLKESGYCTGHEPDSLEFSIVGGWISTRASGMKKN 310
Query: 264 RYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323
YG + D V+++K+V G V++ +S+ + + G D+ I+GSEGTLG+ITE T++++
Sbjct: 311 VYGNIEDLVVHMKMVTPRG-VIEKSSQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRP 369
Query: 324 IPQHSVMRKEALWACFAMEPSFEAMIS-------DVCVPLSCLAELISRSKKELDAS--P 374
P++ A P+FE ++ C P S L+ + + + P
Sbjct: 370 TPEYQKYGSVAF-------PNFEQGVACLREIAKQRCAPASI--RLMDNQQFQFGHALKP 420
Query: 375 LICTVIAHAGDG--NFHTVIL--FDPSK--------EEDRQEAERLNRFMVHTALSMEGT 422
+ ++ DG F+ FDP++ E DR++ + + + A G
Sbjct: 421 QVSSIFTSFLDGFKKFYITKFKGFDPNQISVATLLFEGDREKVLQHEKQVYDIAAKFGGL 480
Query: 423 CTGEHGIGTGKMKYL 437
GE G+ YL
Sbjct: 481 AAGED---NGQRGYL 492
>sp|Q46911|YGCU_ECOLI Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli
(strain K12) GN=ygcU PE=3 SV=4
Length = 484
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 116/229 (50%), Gaps = 16/229 (6%)
Query: 115 LVDELKAICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFP--------RSEDEVSKI 166
+VD+LK I D + +E + + F K +I I P S ++VS++
Sbjct: 8 IVDQLKEIVGADRVIT-DETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRV 66
Query: 167 VKCCDKHKVPIIPYGGATSIEG--HTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIG 224
+ + HK+ +P GA++ EG T+ N V +D S M + + IE+M + G+
Sbjct: 67 LNFMNAHKINGVPRTGASATEGGLETVVENS-VVLDGSAMNQIINIDIENMQATAQCGVP 125
Query: 225 WMELNEYLEPYGLFFPLDP--GPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANG 282
L L G P P A +GG+ ATR G + YG + D V+ L+ VLA+G
Sbjct: 126 LEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADG 185
Query: 283 DVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKI-PQHSVM 330
V + + R+ AAG D+ +IIG+EG L ITEVT+++ K P++++
Sbjct: 186 TVTRIKNVPRR-AAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLF 233
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 389 HTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALET 448
+ V+ P +E D+ LN+ + + + G+ HGIG ++ + + E G+ A
Sbjct: 403 YNVVDCKPEEEIDKYH-NPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGS-AWAL 460
Query: 449 MKRIKVALDPNNIMNPGKLIP 469
++ +K DPN IMN G + P
Sbjct: 461 LEGLKKQFDPNGIMNTGTIYP 481
>sp|O97157|ADAS_TRYBB Alkyldihydroxyacetonephosphate synthase OS=Trypanosoma brucei
brucei PE=3 SV=1
Length = 613
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 23/254 (9%)
Query: 111 IPQELVDELKAI-CQDDMTMDYEERYIH--GKPQNSFHKAVN-----IPDIIVFPRSEDE 162
+ Q VDEL+ + +D + +D R H GK + PD ++ P + D+
Sbjct: 82 VKQPFVDELRQVLSKDQIRLDAYARLTHIFGKNYRDLWRVRRGMIDRPPDAVILPNNHDD 141
Query: 163 VSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGG------VCIDLSLMKSVKALHIEDMD 216
KI++ KH V ++P+ G + + PN + ID+ M + + E
Sbjct: 142 CVKIMELAQKHNVVVVPF-GGGTNVTGGVEPNPFETRRMVISIDMRRMGRMLHIDTESGT 200
Query: 217 VVVEPGIGWMELNEYLEPYGLFFPLDPGPGA--TIGGMCATRCSGSLAVRYGTMRDNVIN 274
V E G+ +++E L YG DP A T+GG A R SG+++ +YG + + ++
Sbjct: 201 AVFEVGVLGPDIDEQLSRYGFMMGHDPDSYAYSTLGGWIAARGSGAMSNKYGDIENMILA 260
Query: 275 LKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVMRKEA 334
++VV G VV+T +R G DL + +GSEG G++TE ++++++P+ V R E
Sbjct: 261 MRVVTPVG-VVETPLTSR--PCGVDLNAMFVGSEGAFGLVTEAVVKIERLPE--VKRYEG 315
Query: 335 LWACFAMEPSFEAM 348
W + E +F A
Sbjct: 316 -WLFPSFEVAFTAF 328
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 397 SKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVAL 456
+ E D + ++ + + L G T HGIG + ++++ G G L+ + + K AL
Sbjct: 506 ADENDLKIFLQVKKRAMEVMLQHRGNLTHHHGIGYEHVPWMKRYNGEGGLDAIMKFKKAL 565
Query: 457 DPNNIMNPGKLIP 469
DP NI NPGKL+P
Sbjct: 566 DPKNICNPGKLLP 578
>sp|Q8X7S0|YGCU_ECO57 Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli
O157:H7 GN=ygcU PE=3 SV=1
Length = 484
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 116/229 (50%), Gaps = 16/229 (6%)
Query: 115 LVDELKAICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFP--------RSEDEVSKI 166
+VD+LK I D + +E + + F K +I I P S ++VS++
Sbjct: 8 IVDQLKEIVGADRVIT-DETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRV 66
Query: 167 VKCCDKHKVPIIPYGGATSIEG--HTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIG 224
+ + HK+ +P GA++ EG T+ N V +D S M + + IE+M + G+
Sbjct: 67 LNFMNAHKINGVPRTGASATEGGLETVVENS-VVLDGSAMNQIINIDIENMQATAQCGVP 125
Query: 225 WMELNEYLEPYGLFFPLDP--GPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANG 282
L L G P P A +GG+ ATR G + YG + D V+ L+ VLA+G
Sbjct: 126 LEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADG 185
Query: 283 DVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKI-PQHSVM 330
V + + R+ AAG D+ +IIG+EG L ITEVT+++ K P++++
Sbjct: 186 TVTRIKNVPRR-AAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLF 233
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 389 HTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALET 448
+ V+ P +E D+ LN+ + + + G+ HGIG ++ + + E G+ A
Sbjct: 403 YNVVNCKPEEEIDKYH-NPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGS-AWAL 460
Query: 449 MKRIKVALDPNNIMNPGKLIP 469
++ +K DPN IMN G + P
Sbjct: 461 LEGLKKQFDPNGIMNTGTIYP 481
>sp|P77748|YDIJ_ECOLI Uncharacterized protein YdiJ OS=Escherichia coli (strain K12)
GN=ydiJ PE=4 SV=1
Length = 1018
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 123/277 (44%), Gaps = 65/277 (23%)
Query: 111 IPQELVDELKAICQDDMTMDYEERY---IHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIV 167
+ Q +++ L+ + Q T D Y + NS ++ +PD +VFPRS +V+ I
Sbjct: 11 VVQLVLNFLQELEQQGFTGDTATSYADRLTMSTDNSIYQL--LPDAVVFPRSTADVALIA 68
Query: 168 KCCDKHK---VPIIPYGGATSIEGHTLSPNGGVCIDLSL-MKSVKALHIEDMDVVVEPGI 223
+ + + + P GG T G L N G+ +D+S M + ++ E+ V VE G+
Sbjct: 69 RLAAQERYSSLIFTPRGGGTGTNGQAL--NQGIIVDMSRHMNRIIEINPEEGWVRVEAGV 126
Query: 224 GWMELNEYLEPYGLFFP--LDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLAN 281
+LN+YL+P+G FF L AT+GGM T SG ++ YG D+V+ ++ VL
Sbjct: 127 IKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGVRAVLLG 186
Query: 282 GDVVKTA-------------------------SRARKSA--------------AGY---- 298
GD++ T R R+ GY
Sbjct: 187 GDILDTQPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLTGYDLRH 246
Query: 299 ---------DLTRLIIGSEGTLGIITEVTLRLQKIPQ 326
DLTR++ GSEGTL ITE L + ++P+
Sbjct: 247 VFNDEMTEFDLTRILTGSEGTLAFITEARLDITRLPK 283
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 351 DVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNR 410
D CVP LA+ I+ + LD+ L + H G H D + ++++
Sbjct: 424 DTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQISD 483
Query: 411 FMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKLIPP 470
+V G GEHG G + +Y G ++++K A DP+N +NPGK+ PP
Sbjct: 484 DVVALTAKYGGLLWGEHGKGF-RAEYSPAFFGEELFAELRKVKAAFDPHNRLNPGKICPP 542
>sp|Q57252|Y1163_HAEIN Uncharacterized protein HI_1163 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1163 PE=1 SV=1
Length = 1027
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 70/286 (24%)
Query: 110 EIPQELVDELKAI-CQD---DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSK 165
++ Q ++D L + CQ D+ +Y +R + NS ++ +P I+FP++ ++ +
Sbjct: 10 QVEQYVLDYLDDLQCQHFEGDIATNYADR-LSLATDNSVYQ--QLPQAILFPKTVADIVR 66
Query: 166 IVKCC---DKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSL-MKSVKALHIEDMDVVVEP 221
I K + + P GG T G ++ N + +DLS M ++ L++++ V V+
Sbjct: 67 ITKLANLPEYQSISFTPRGGGTGTNGQSI--NNNIIVDLSRHMTAILELNVKERWVRVQA 124
Query: 222 GIGWMELNEYLEPYGLFFP--LDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVL 279
G+ +LN++L+P+GLFF L AT+GGM T SG +++YG ++V+ L+ VL
Sbjct: 125 GVVKDQLNQFLKPHGLFFAPELSTSNRATLGGMINTDASGQGSLQYGKTSNHVLALRAVL 184
Query: 280 ANGDVVKTAS------------------------------RARKSA------------AG 297
NG+++ T++ + +++A G
Sbjct: 185 INGEILDTSAVNSVDVLENIDALELSESSKKLHQTIAQHCKEKRAAIIKDLPQLNRFLTG 244
Query: 298 YD-------------LTRLIIGSEGTLGIITEVTLRLQKIPQHSVM 330
YD LTR++ GSEG+L I E L L IPQ+ +
Sbjct: 245 YDLKNVFNEDESEFNLTRILTGSEGSLAFICEAKLNLLLIPQYRTL 290
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 348 MISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAER 407
+ D CVP LA+ IS + LD L + H G H D +E + ++
Sbjct: 424 FVEDTCVPPENLADYISEFRALLDQHNLQYGMFGHVDAGVLHVRPALDLCDKEQVKLFKQ 483
Query: 408 LNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKL 467
++ + + G GEHG G + Y EK ++ IK DPNN +NPGK+
Sbjct: 484 ISDEVAELTIKYGGLLWGEHGKGV-RSHYGEKFFTPELWHELRYIKTLFDPNNRLNPGKI 542
Query: 468 IPP 470
P
Sbjct: 543 CTP 545
>sp|P0AEP9|GLCD_ECOLI Glycolate oxidase subunit GlcD OS=Escherichia coli (strain K12)
GN=glcD PE=3 SV=1
Length = 499
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKAL 210
P ++V P+ ++V+ I+ C + +VP++ G T + G L GV + ++ K + +
Sbjct: 56 PLLVVLPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARFKEILDI 115
Query: 211 HIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAVRYGTM 268
+ V+PG+ + +++ + P+ L++ DP +IGG A G ++YG
Sbjct: 116 NPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLT 175
Query: 269 RDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHS 328
N++ ++V +G+ + S A S G+DL L GSEG LG+ TEVT++L +P+
Sbjct: 176 VHNLLKIEVQTLDGEALTLGSDALDS-PGFDLLALFTGSEGMLGVTTEVTVKL--LPKPP 232
Query: 329 VMRKEALWACF 339
V R L A F
Sbjct: 233 VAR--VLLASF 241
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 331 RKEALWACFAMEPSFEAMISDVCVP---LSCLAELISRSKKELDASPLICTVIAHAGDGN 387
RK A A + P + M D +P L + E I+R ++ D L + HAGDGN
Sbjct: 337 RKNAFPAVGRISPDYYCM--DGTIPRRALPGVLEGIARLSQQYD---LRVANVFHAGDGN 391
Query: 388 FHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALE 447
H +ILFD ++ + AE L ++ + + G+ +GEHGIG K+ + + + +
Sbjct: 392 MHPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEIT 451
Query: 448 TMKRIKVALDPNNIMNPGKLIPP-HIC 473
T +K A DP+ ++NPGK IP H C
Sbjct: 452 TFHAVKAAFDPDGLLNPGKNIPTLHRC 478
>sp|P0AEQ0|GLCD_ECOL6 Glycolate oxidase subunit GlcD OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=glcD PE=3 SV=1
Length = 499
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKAL 210
P ++V P+ ++V+ I+ C + +VP++ G T + G L GV + ++ K + +
Sbjct: 56 PLLVVLPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARFKEILDI 115
Query: 211 HIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAVRYGTM 268
+ V+PG+ + +++ + P+ L++ DP +IGG A G ++YG
Sbjct: 116 NPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLT 175
Query: 269 RDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHS 328
N++ ++V +G+ + S A S G+DL L GSEG LG+ TEVT++L +P+
Sbjct: 176 VHNLLKIEVQTLDGEALTLGSDALDS-PGFDLLALFTGSEGMLGVTTEVTVKL--LPKPP 232
Query: 329 VMRKEALWACF 339
V R L A F
Sbjct: 233 VAR--VLLASF 241
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 331 RKEALWACFAMEPSFEAMISDVCVP---LSCLAELISRSKKELDASPLICTVIAHAGDGN 387
RK A A + P + M D +P L + E I+R ++ D L + HAGDGN
Sbjct: 337 RKNAFPAVGRISPDYYCM--DGTIPRRALPGVLEGIARLSQQYD---LRVANVFHAGDGN 391
Query: 388 FHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALE 447
H +ILFD ++ + AE L ++ + + G+ +GEHGIG K+ + + + +
Sbjct: 392 MHPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEIT 451
Query: 448 TMKRIKVALDPNNIMNPGKLIPP-HIC 473
T +K A DP+ ++NPGK IP H C
Sbjct: 452 TFHAVKAAFDPDGLLNPGKNIPTLHRC 478
>sp|Q9C1X2|YN53_SCHPO Putative D-lactate dehydrogenase C713.03, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC713.03 PE=3 SV=1
Length = 526
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 125 DDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGAT 184
D +D+ +Y GK Q + + P++ +VS+I+K C++ K+ ++P GG T
Sbjct: 83 DAFNIDWMNKY-RGKTQ-----------LALKPKTTQQVSEILKYCNQKKLAVVPQGGNT 130
Query: 185 SIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG 244
+ G ++ + ++L LM + + ++ G+ + +L G FPLD G
Sbjct: 131 GLVGGSVPVFDEIVLNLGLMNQIHTFDEISGVITLDSGVILENADNFLAEKGYMFPLDLG 190
Query: 245 PGAT--IGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTR 302
+ +GG AT G +RYG++ +++ ++ VL +G ++ RK G D+ +
Sbjct: 191 AKGSCQVGGCAATAAGGLRLLRYGSLHGSILGMEAVLPDGTILDNLVTLRKDNTGLDIKQ 250
Query: 303 LIIGSEGTLGIITEVTLRLQKIPQHSVMRKEALWACFAMEPSFEAMISDVCVPLSCLAEL 362
L IGSEG LG+IT++++ K P + + A F + PS+E ++ S L E+
Sbjct: 251 LFIGSEGYLGVITKLSVICPKRPSSTNV------AFFGV-PSYENVLKAFSETRSHLTEI 303
Query: 363 IS 364
+S
Sbjct: 304 LS 305
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 14/148 (9%)
Query: 331 RKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKEL---------DASPLICTV-I 380
R+E + C A S DV +PL L +L++ +KK L P+I V
Sbjct: 383 RREGITECLAKAGS-GVYKYDVSLPLPVLYDLVNDTKKRLIEFNLLDDTPEHPVIDVVGF 441
Query: 381 AHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKE 440
H GDGN H I ++ D++ + L ++ G+ + EHG+G K ++
Sbjct: 442 GHMGDGNLHLNI---AVRQFDKRVEKCLEPWVYEWVSRHRGSISAEHGLGLLKKPFVGYS 498
Query: 441 LGTGALETMKRIKVALDPNNIMNPGKLI 468
+ MK +K DPN IM P K +
Sbjct: 499 KSKEMIHLMKTLKNVFDPNGIMLPYKYV 526
>sp|P52073|GLCE_ECOLI Glycolate oxidase subunit GlcE OS=Escherichia coli (strain K12)
GN=glcE PE=4 SV=1
Length = 350
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 193 PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDP---GPGATI 249
P G +D+ + + ++ + G + + LE G P +P G AT
Sbjct: 39 PVTGQTLDVRCHRGIVNYDPTELVITARVGTPLVTIEAALESAGQMLPCEPPHYGEEATW 98
Query: 250 GGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEG 309
GGM A +G G++RD V+ +++ G ++ K+ AGYDL+RL++GS G
Sbjct: 99 GGMVACGLAGPRRPWSGSVRDFVLGTRIITGAGKHLRFGGEVMKNVAGYDLSRLMVGSYG 158
Query: 310 TLGIITEVTLRLQKIPQHSV-MRKE 333
LG++TE+++++ P+ S+ +R+E
Sbjct: 159 CLGVLTEISMKVLPRPRASLSLRRE 183
>sp|Q796P5|YITY_BACSU Uncharacterized FAD-linked oxidoreductase YitY OS=Bacillus subtilis
(strain 168) GN=yitY PE=3 SV=2
Length = 476
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 158 RSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDV 217
+ E+ + VK ++ + I G S+ GHT +G + +D++ + +L E +
Sbjct: 52 QEEEMLIDTVKEANRKNIKISIAGAQHSMGGHTYYEDG-IVLDMTGYNKILSLDQEKKTI 110
Query: 218 VVEPGIGWMELNEYLEPYGLFFPLDPGPGA-TIGGMCATRCSGSLAVRYGTMRDNVINLK 276
V+ G W ++ +Y+ PYGL + TIGG + G +RYG++ D V + +
Sbjct: 111 RVQSGATWNDIQKYVNPYGLAVKVMQSQNIFTIGGSLSANAHGR-DIRYGSLIDTVKSFR 169
Query: 277 VVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVMRKEAL 335
++ A+G ++ + DL +IG G G+I +VTL L + VM+ E +
Sbjct: 170 LLKADGMIITVTPKD-------DLFTAVIGGYGLFGVILDVTLELTD-DELYVMKTEKM 220
>sp|Q7SGY1|ALO_NEUCR Putative D-arabinono-1,4-lactone oxidase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=alo-1 PE=3 SV=1
Length = 556
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 16/228 (7%)
Query: 111 IPQELVDELKAICQDDMTMDYEER--YIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVK 168
+P + + ++ Q D + + + ++H +F ++P++ + P S E+ K+V+
Sbjct: 12 LPSNVREIIELASQRDGGIPFRAKTAHVHRTWAGTF---TSLPELYIQPESVSEIQKVVR 68
Query: 169 CCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228
+ + G S T + + V +D + K + H+ + VVV+ GI +L
Sbjct: 69 LARHARRRVTTTGCGHSPSDITCTSSWLVNLD-NFNKVISVDHLTGL-VVVQAGIRLYQL 126
Query: 229 NEYLEPYGLFFP-LDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKT 287
++ L+ GL P L +I G +T GS +++G + +++ LK+ LANG+ +
Sbjct: 127 SDELDRRGLALPSLGSINEQSIAGAISTGTHGS-GIKHGLVGESITELKITLANGETLSC 185
Query: 288 ASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVMRKEAL 335
+ + DL R + S G LGIITEVT + +P S+ +A+
Sbjct: 186 SPEDKP-----DLFRAALISLGALGIITEVTFK--AVPAFSLAWSQAI 226
>sp|P09788|DH4C_PSEPU 4-cresol dehydrogenase [hydroxylating] flavoprotein subunit
OS=Pseudomonas putida GN=pchF PE=1 SV=3
Length = 521
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 23/227 (10%)
Query: 116 VDELKAICQDDMTMDYEERYI-HGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHK 174
V + +A+ DD + ++ + + K A + P V + ++V +VK C++HK
Sbjct: 22 VQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHK 81
Query: 175 VPI--------IPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226
+PI YG A ++ G V +DL M + + E +VEPG+ +
Sbjct: 82 IPIWTISTGRNFGYGSAAPVQ------RGQVILDLKKMNKIIKIDPEMCYALVEPGVTFG 135
Query: 227 ELNEYLEPYGLFFPLD-PGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVV 285
++ +Y++ L L P A G + T G YG ++VVLANGDV
Sbjct: 136 QMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYTPYGEHFMMQCGMEVVLANGDVY 195
Query: 286 KTASRARKSAAGYDLTRLIIG-------SEGTLGIITEVTLRLQKIP 325
+T + + + + G ++ GI T++ L P
Sbjct: 196 RTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKP 242
>sp|Q6YW50|CKX7_ORYSJ Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7
PE=3 SV=1
Length = 524
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 39/197 (19%)
Query: 151 PDIIVFPRSEDEVSKIVK--CCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVK 208
P+ ++ P + E++++V+ P+ P G S G +L+P GGV +D+ + S +
Sbjct: 59 PEAVLHPATPAEIAELVRFSASSPSPFPVAPRGQGHSARGQSLAP-GGVVVDMRALASRR 117
Query: 209 A------------------LHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIG 250
L + + +E G+ +YL T+
Sbjct: 118 GRVNVSAGAAPYVDAGGEQLWADVLRATLEHGLAPRVWTDYLR-------------ITVA 164
Query: 251 GMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGT 310
G + G A R+G NV+ L V+ GD+V T SR + S DL ++G G
Sbjct: 165 GTLSNAGIGGQAFRHGPQIANVLELDVITGTGDMV-TCSRDKDS----DLFFAVLGGLGQ 219
Query: 311 LGIITEVTLRLQKIPQH 327
GIIT + L P+
Sbjct: 220 FGIITRARIGLMPAPKR 236
>sp|Q6YW51|CKX6_ORYSJ Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6
PE=3 SV=1
Length = 527
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 42/200 (21%)
Query: 151 PDIIVFPRSEDEVSKIVK--CCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVK 208
P+ ++ P + E++++V+ P+ P G S G +L+P GGV +D+ + + +
Sbjct: 59 PEAVLHPATPAEIAELVRFSASSPSPFPVAPRGQGHSARGQSLAP-GGVVVDMRALAARR 117
Query: 209 A---------------------LHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGA 247
L + + +E G+ +YL
Sbjct: 118 GRVNVSAGGAGAAPYVDAGGEQLWADVLRATLEHGLAPRVWTDYLR-------------I 164
Query: 248 TIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGS 307
T+ G + G A R+G NV+ L V+ GD+V T SR ++ DL ++G
Sbjct: 165 TVAGTLSNAGIGGQAFRHGPQIANVLELDVITGRGDMV-TCSRDKEP----DLFFAVLGG 219
Query: 308 EGTLGIITEVTLRLQKIPQH 327
G GIIT + L+ P+
Sbjct: 220 LGQFGIITRARIGLEPAPKR 239
>sp|Q9FUJ1|CKX7_ARATH Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1
Length = 524
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 78/190 (41%), Gaps = 27/190 (14%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDK-HKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKS--- 206
P +V P ++++ VK + K+ + G SI G ++ GG+ +D+S
Sbjct: 62 PLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMA-EGGLVVDMSTTAENHF 120
Query: 207 -VKALHIEDMDVVVEPGIG--WME-LNEYLEPYGLFFPLDPGP-------GATIGGMCAT 255
V L D V+ G W + L + YGL P G T+GG +
Sbjct: 121 EVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGL------APRSWTDYLGLTVGGTLSN 174
Query: 256 RCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIIT 315
A RYG NV L VV NGDVV T S S +L ++G G GIIT
Sbjct: 175 AGVSGQAFRYGPQTSNVTELDVVTGNGDVV-TCSEIENS----ELFFSVLGGLGQFGIIT 229
Query: 316 EVTLRLQKIP 325
+ LQ P
Sbjct: 230 RARVLLQPAP 239
>sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxidans PE=1 SV=2
Length = 458
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKAL 210
P +I S +V+K V+ + + I G + G+ + +GG+ +DL LM S+
Sbjct: 38 PSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATN-DGGIVLDLRLMNSI--- 93
Query: 211 HIEDMDVVVEPGIGWM--ELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTM 268
HI+ G G + +L + +GL P G+ G L +YG
Sbjct: 94 HIDTAGSRARIGGGVISGDLVKEAAKFGLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLA 153
Query: 269 RDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQ 326
DN++ +V A GDV+ + R +L + G+ G++TEV ++L ++P+
Sbjct: 154 SDNILGATLVTATGDVIYCSDDERP-----ELFWAVRGAGPNFGVVTEVEVQLYELPR 206
>sp|O93852|ALO_CANAL D-arabinono-1,4-lactone oxidase OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=ALO1 PE=3 SV=1
Length = 557
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCID----LSLMKS 206
P I PR+ +E+ +++K H I+ G S T++ +D + L +
Sbjct: 29 PQAIFQPRNVEEIQELIKQARLHGKTIMTVGSGHSPSDLTMTTEWLCNLDKFNHVLLEEP 88
Query: 207 VKAL--------HIEDMDVVVEPGIGWMELNEYLEPYGLFFP-LDPGPGATIGGMCATRC 257
A I+ +D+ VE G ELNEYL+ L L +I G+ +T
Sbjct: 89 YYAPKSPTDDTPEIKFVDLTVEAGTRIFELNEYLKRNNLAIQNLGSISDQSIAGLISTGT 148
Query: 258 SGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEV 317
GS +G + V+++K + + G+++ +S + + R I+ S G +GIIT V
Sbjct: 149 HGSTQY-HGLVSQQVVSVKFLNSAGELITCSSVDKP-----EYFRAILLSLGKIGIITHV 202
Query: 318 TLRLQKIPQHSVMRKEAL 335
TLR P++++ K+ +
Sbjct: 203 TLR--TCPKYTIKSKQEI 218
>sp|P56216|VAOX_PENSI Vanillyl-alcohol oxidase OS=Penicillium simplicissimum GN=VAOA PE=1
SV=1
Length = 560
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 154 IVFPRSEDEVSKIVKCCDKHKVPIIP--------YGGATSIEGHTLSPNGGVCIDLSL-M 204
IV PR+ +V IV +K P+ P YGGA +G V +D+ M
Sbjct: 74 IVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAP------RVSGSVVLDMGKNM 127
Query: 205 KSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPL-----DPGPGATIGGMCATRCSG 259
V +++E VVEPG+ + +L+ YLE L L D G G+ +G R G
Sbjct: 128 NRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGN-AVERGVG 186
Query: 260 SLAVRYGTMRDNVINLKVVLANGDVVKTASRA 291
YG ++VVLANG++++T A
Sbjct: 187 YTP--YGDHWMMHSGMEVVLANGELLRTGMGA 216
>sp|O06997|YVDP_BACSU Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis
(strain 168) GN=yvdP PE=1 SV=1
Length = 447
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 9/218 (4%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKAL 210
P + VF ++ +VS +K ++KVP+ G +++ + +GG+ ID+S M V L
Sbjct: 33 PLVFVFAQNSYDVSNAIKWARENKVPLRVRSGRHALDKNLSVVSGGIVIDVSDMNKV-FL 91
Query: 211 HIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRD 270
E+ V+ GI L + L G P P IGG+ G L+ G + D
Sbjct: 92 DEENAIATVQTGIPVGPLVKGLARDGFMAPFGDSPTVGIGGITMGGGFGVLSRSIGLISD 151
Query: 271 NVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVM 330
N++ LK V A G ++ A +S L G G G T+ T ++ + P+ + +
Sbjct: 152 NLLALKTVDAKGRII----HADQSHNEDLLWASRGGGGGNFGYNTQYTFKVHRAPKTATV 207
Query: 331 RKEALWACFAMEPSFEA---MISDVCVPLSCLAELISR 365
+W +E F+A V L C E+ S+
Sbjct: 208 FN-IIWPWEQLETVFKAWQKWAPFVDERLGCYLEIYSK 244
>sp|Q752Y3|ALO_ASHGO D-arabinono-1,4-lactone oxidase OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ALO1
PE=3 SV=1
Length = 532
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS---PNGGVCIDLSLMKSV 207
P + PRSEDEV IV+ + I+ G GH+ S ++L + V
Sbjct: 29 PRLYFQPRSEDEVVAIVRAAREQGRTIVTVGS-----GHSPSDMCATDDWMVNLDRLNGV 83
Query: 208 KALHIEDM----DVVVEPGIGWMELNEYLEPYGLFFP-LDPGPGATIGGMCATRCSGSLA 262
L ++ DV V GI EL+ YL G L ++GG+ +T GS +
Sbjct: 84 LELQEDEQGRYADVTVAAGIRVYELHRYLSARGYALQNLGSISEQSVGGIISTGTHGS-S 142
Query: 263 VRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRL 321
+G + +NL +V G++V S ++ R + S G LGII T+R+
Sbjct: 143 PYHGLVSSQYVNLTLVNGRGELVFLDSEHEP-----EVFRAAMLSLGKLGIIVRATIRV 196
>sp|O22213|CKX1_ARATH Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1
Length = 575
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 22/201 (10%)
Query: 151 PDIIVFPRSEDEVSK----IVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKS 206
P I+ PRS ++S IV + + G S++G L+ + GV I + ++S
Sbjct: 88 PLAILHPRSVFDISSMMKHIVHLGSTSNLTVAARGHGHSLQGQALA-HQGVVIKMESLRS 146
Query: 207 --VKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGA-----TIGGMCATRCSG 259
++ + V V G W+ + YGL P T+GG +
Sbjct: 147 PDIRIYKGKQPYVDVSGGEIWINILRETLKYGL----SPKSWTDYLHLTVGGTLSNAGIS 202
Query: 260 SLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTL 319
A ++G +NV L++V G+VV T S R S +L ++G G GIIT +
Sbjct: 203 GQAFKHGPQINNVYQLEIVTGKGEVV-TCSEKRNS----ELFFSVLGGLGQFGIITRARI 257
Query: 320 RLQKIPQHSVMRKEALWACFA 340
L+ P H V L++ F+
Sbjct: 258 SLEPAP-HMVKWIRVLYSDFS 277
>sp|Q8LNV6|CKX3_ORYSJ Cytokinin dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CKX3
PE=2 SV=1
Length = 527
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 22/212 (10%)
Query: 174 KVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVV---VEPGIGWMELNE 230
KV + G SI G + +G V SL ++ + DV V GI W+EL E
Sbjct: 82 KVTVAARGAGHSIHGQAQALDGIVVEMSSLPSEIEFYRRGEGDVSYADVGGGIMWIELLE 141
Query: 231 YLEPYGLFFPLDPGPGA-------TIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGD 283
GL P + TIGG + ++G NV+ L+VV G+
Sbjct: 142 QSLKLGL------APRSWTDYLYLTIGGTLSNAGISGQTFKHGPQISNVLQLEVVTGRGE 195
Query: 284 VVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVMRKEALWACFAMEP 343
+V T S + + +L ++G G GIIT + LQ+ PQ V A + FA
Sbjct: 196 IV-TCSPTKDA----ELFNAVLGGLGQFGIITRARILLQEAPQ-KVKWVRAFYDDFATFT 249
Query: 344 SFEAMISDVCVPLSCLAELISRSKKELDASPL 375
+ ++ + V + + I +++ L +S +
Sbjct: 250 KDQELLVSMPVLVDYVEGFIVLNEQSLHSSSI 281
>sp|Q54H55|Y8969_DICDI FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum
GN=DDB_G0289697 PE=2 SV=1
Length = 452
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 147 AVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKS 206
VN P +IV+P++ +V K V + ++ GA G + + G+ +++S MK+
Sbjct: 44 VVNTPLLIVYPKNIQDVVKAVNFSRECQLDFAVIAGA---HGFKSTCDNGLLLNISSMKN 100
Query: 207 VKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYG 266
+K VVVE G +L++ +GL P +GG+ G L+ G
Sbjct: 101 IKVDEASKT-VVVETGCTLGDLDKETSKFGLGIPSGHVSHTGLGGLTLGGGIGHLSRSLG 159
Query: 267 TMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKI 324
DN+I +V G++ K ++ K +L I G+ G+IT+ T +L +
Sbjct: 160 LTSDNLIGCTLVNYKGEIEKVTDQSNK-----ELIYAIRGAGSNFGVITDFTFKLHPV 212
>sp|Q6Z955|CKX11_ORYSJ Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11
PE=2 SV=1
Length = 518
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 39/209 (18%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDK-HKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKA 209
P +V P S D+V+ ++ + + + G S+ G ++ GG+ +D+ +
Sbjct: 45 PAAVVRPASSDDVASAIRAAARTAHLTVAARGNGHSVAGQAMA-RGGLVLDMRALP---- 99
Query: 210 LHIEDMDVVVEP----------GIGWME-LNEYLEPYGLFFPLDPGPGA-------TIGG 251
M +VV P G W E L+ + +GL P + T+GG
Sbjct: 100 ---RRMQLVVAPSGEKFADVPGGALWEEVLHWAVSKHGL------APASWTDYLRLTVGG 150
Query: 252 MCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTL 311
+ + RYG NV L+VV +G+ SR +A DL ++G G
Sbjct: 151 TLSNGGVSGQSFRYGPQVSNVAQLEVVTGDGE-CHVCSR----SADPDLFFAVLGGLGQF 205
Query: 312 GIITEVTLRLQKIPQHSVMRKEALWACFA 340
G+IT + L PQ +V ++A FA
Sbjct: 206 GVITRARIPLSPAPQ-TVRWTRVVYASFA 233
>sp|Q796Y5|YGAK_BACSU Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis
(strain 168) GN=ygaK PE=3 SV=4
Length = 451
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKAL 210
PDIIVF +++ + +K +++VP GG S E +L N G+ IDLS MK +
Sbjct: 33 PDIIVFCQNKQDALNALKWARENRVPFRIRGGRHSYENFSLL-NNGLVIDLSEMKKITVN 91
Query: 211 HIEDMDVVVEPGIGWMELNEYLEPYGLFFP 240
+ + +E G E+ L YGL P
Sbjct: 92 QDKKL-AYIEAGAELGEVYRTLWQYGLTLP 120
>sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1
Length = 523
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 26/200 (13%)
Query: 150 IPDIIVFPRSEDEVSKIVKCCDKHKV--PIIPYGGATSIEGHTLSPNGGVCIDLSLMKSV 207
P ++ P S ++++ ++K ++ P+ G S G + +G V S++
Sbjct: 69 FPSAVLIPSSVEDITDLIKLSFDSQLSFPLAARGHGHSHRGQASAKDGVVVNMRSMVNRD 128
Query: 208 KALHIEDMDVVVEPGIGWME---LNEYLEPYGLFFPLDPGPGA-----TIGGMCATRCSG 259
+ + + + V+ W+ LN+ LE L P T+GG +
Sbjct: 129 RGIKVSRTCLYVDVDAAWLWIEVLNKTLE-----LGLTPVSWTDYLYLTVGGTLSNGGIS 183
Query: 260 SLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTL 319
RYG NV+ + V+ G++ T S+ S DL ++G G GIIT +
Sbjct: 184 GQTFRYGPQITNVLEMDVITGKGEIA-TCSKDMNS----DLFFAVLGGLGQFGIITRARI 238
Query: 320 RLQKIPQHSVMRKEALWACF 339
+L+ P K A W F
Sbjct: 239 KLEVAP------KRAKWLRF 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,060,757
Number of Sequences: 539616
Number of extensions: 7541626
Number of successful extensions: 18698
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 18495
Number of HSP's gapped (non-prelim): 181
length of query: 474
length of database: 191,569,459
effective HSP length: 121
effective length of query: 353
effective length of database: 126,275,923
effective search space: 44575400819
effective search space used: 44575400819
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)