Query 011962
Match_columns 474
No_of_seqs 347 out of 2523
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 18:51:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pm9_A Putative oxidoreductase 100.0 1.8E-65 6.3E-70 541.7 31.6 362 105-468 7-476 (476)
2 4bby_A Alkyldihydroxyacetoneph 100.0 5.2E-61 1.8E-65 526.7 32.0 360 107-468 156-658 (658)
3 2uuu_A Alkyldihydroxyacetoneph 100.0 1.9E-57 6.4E-62 490.9 23.1 360 107-468 86-584 (584)
4 1e8g_A Vanillyl-alcohol oxidas 100.0 5.8E-52 2E-56 447.4 32.2 344 114-469 23-548 (560)
5 1wvf_A 4-cresol dehydrogenase 100.0 2E-50 6.9E-55 432.3 33.8 346 114-471 19-516 (520)
6 1f0x_A DLDH, D-lactate dehydro 100.0 2.2E-52 7.6E-57 448.8 15.8 339 112-471 9-563 (571)
7 1w1o_A Cytokinin dehydrogenase 100.0 1.1E-45 3.7E-50 396.8 31.3 344 113-469 32-534 (534)
8 2exr_A Cytokinin dehydrogenase 100.0 4.8E-46 1.6E-50 398.2 21.6 206 111-328 26-242 (524)
9 3tsh_A Pollen allergen PHL P 4 100.0 6.5E-40 2.2E-44 349.4 24.3 211 111-328 7-229 (500)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.9E-37 6.3E-42 327.1 27.5 174 146-326 34-207 (459)
11 2vfr_A Xylitol oxidase, aldito 100.0 2.2E-38 7.6E-43 330.8 19.8 297 148-464 18-413 (422)
12 4feh_A Oxidoreductase DPRE1; a 100.0 9.6E-37 3.3E-41 322.4 25.7 308 142-463 34-471 (481)
13 3fw9_A Reticuline oxidase; BI- 100.0 2.2E-36 7.6E-41 320.5 25.5 173 148-327 43-219 (495)
14 3rja_A Carbohydrate oxidase; p 100.0 5.4E-36 1.8E-40 316.6 26.4 195 126-327 13-210 (473)
15 2ipi_A Aclacinomycin oxidoredu 100.0 2.7E-36 9.4E-41 322.5 23.9 180 146-326 51-245 (521)
16 3pop_A GILR oxidase; FAD bindi 100.0 2.3E-36 7.7E-41 321.1 22.1 197 121-321 6-208 (501)
17 3vte_A Tetrahydrocannabinolic 100.0 3E-36 1E-40 320.5 22.1 173 148-327 51-227 (518)
18 2wdx_A Putative hexose oxidase 100.0 3.7E-35 1.3E-39 313.7 28.0 179 147-326 54-247 (523)
19 2y3s_A TAML; oxidoreductase; H 100.0 6.7E-35 2.3E-39 312.1 24.8 175 146-321 54-232 (530)
20 3tx1_A UDP-N-acetylenolpyruvoy 100.0 5.3E-36 1.8E-40 300.9 10.1 286 111-421 20-308 (322)
21 1zr6_A Glucooligosaccharide ox 100.0 6.6E-34 2.2E-38 303.0 18.9 202 117-326 7-213 (503)
22 1hsk_A UDP-N-acetylenolpyruvoy 100.0 6.8E-34 2.3E-38 286.8 12.8 288 109-422 12-303 (326)
23 3i99_A UDP-N-acetylenolpyruvoy 100.0 1.4E-32 4.7E-37 278.9 17.2 265 144-421 24-331 (357)
24 3js8_A Cholesterol oxidase; ch 100.0 4.4E-31 1.5E-35 280.0 26.2 171 147-327 26-220 (540)
25 1uxy_A MURB, uridine diphospho 100.0 1.2E-31 4.2E-36 271.0 20.2 267 143-421 7-317 (340)
26 2i0k_A Oxidoreductase; MIX alp 100.0 5E-30 1.7E-34 276.2 25.5 173 146-327 31-224 (561)
27 2gqt_A UDP-N-acetylenolpyruvyl 100.0 3.4E-30 1.2E-34 252.1 10.7 241 141-415 14-257 (268)
28 2yvs_A Glycolate oxidase subun 99.8 1.4E-21 4.8E-26 185.7 9.2 116 209-328 2-118 (219)
29 1ffv_C CUTM, flavoprotein of c 98.4 1.2E-07 4.3E-12 93.3 4.5 153 151-323 5-176 (287)
30 2w3s_A Xanthine dehydrogenase; 97.9 2.9E-06 9.9E-11 88.8 2.0 153 149-323 175-345 (462)
31 1n62_C Carbon monoxide dehydro 97.5 3.9E-05 1.3E-09 75.4 2.9 152 151-323 5-176 (288)
32 3nvz_B Xanthine dehydrogenase/ 97.4 0.00012 4E-09 72.5 5.4 126 148-283 7-157 (305)
33 1t3q_C Quinoline 2-oxidoreduct 96.7 0.0017 5.7E-08 63.7 5.7 120 151-283 5-143 (288)
34 1zr6_A Glucooligosaccharide ox 93.9 0.052 1.8E-06 57.2 5.3 33 435-468 444-476 (503)
35 3hrd_C Nicotinate dehydrogenas 93.6 0.092 3.1E-06 51.4 6.2 104 151-256 3-118 (296)
36 1rm6_B 4-hydroxybenzoyl-COA re 90.4 0.41 1.4E-05 47.3 6.6 100 151-255 6-118 (324)
37 3unc_A Xanthine dehydrogenase/ 79.5 1.9 6.6E-05 50.5 5.9 105 149-257 231-356 (1332)
38 3zyv_A AOH1; oxidoreductase, m 37.7 13 0.00044 43.6 2.3 101 152-256 241-362 (1335)
39 1aie_A P53; oligomer, DNA; 1.5 30.8 21 0.00072 22.4 1.4 19 439-457 6-24 (31)
40 1xty_A PTH, peptidyl-tRNA hydr 29.7 60 0.002 26.8 4.6 36 148-183 52-88 (120)
41 1rzw_A Protein AF2095(GR4); be 28.3 65 0.0022 26.8 4.5 36 149-184 47-83 (123)
42 1wn2_A Peptidyl-tRNA hydrolase 28.2 66 0.0023 26.6 4.6 37 148-184 53-90 (121)
43 2vda_B Maltoporin; sugar trans 26.4 23 0.0008 20.8 1.0 18 58-75 9-26 (28)
44 2zv3_A PTH, peptidyl-tRNA hydr 24.6 65 0.0022 26.3 3.9 31 148-178 47-77 (115)
45 1rlk_A Hypothetical protein TA 24.6 65 0.0022 26.4 3.9 37 148-184 49-86 (117)
46 2lnd_A De novo designed protei 22.5 95 0.0032 23.8 4.0 34 152-185 29-62 (112)
47 1q7s_A BIT1, protein CGI-147; 21.8 1E+02 0.0036 25.2 4.6 30 149-178 50-79 (117)
48 1yht_A DSPB; beta barrel, hydr 21.2 49 0.0017 32.8 2.8 22 158-179 92-113 (367)
49 3zy0_A Tumor protein P63; tran 20.5 42 0.0015 21.1 1.4 19 439-457 9-27 (32)
No 1
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.8e-65 Score=541.71 Aligned_cols=362 Identities=30% Similarity=0.457 Sum_probs=316.3
Q ss_pred cCCCCCCCHHHHHHHHhhcCC-CcccChhhhhhhcCCCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCC
Q 011962 105 KGSHKEIPQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGA 183 (474)
Q Consensus 105 ~~~~~~~~~~~~~~L~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG 183 (474)
..+...++++++++|+++++. +|.+++.....|..+++. +.++.|.+||+|+|++||+++|++|+++++|++++|||
T Consensus 7 ~~~~~~~~~~~~~~L~~~lg~~~v~~~~~~~~~~~~d~~~--~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgG 84 (476)
T 3pm9_A 7 QLSPVTLSPELIARFTAIVGDKHALTDPLELEAYITEERN--LYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGN 84 (476)
T ss_dssp -----CCCHHHHHHHHHHHCGGGEECSHHHHHHHHBCTTC--CCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSS
T ss_pred ccCcccCCHHHHHHHHHhcCCCcEecCHHHHHHHhccccc--ccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 334556888999999999985 688887777777655432 34568999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHHHHHccCCCeeCCCCCC--CceecccccccccCCC
Q 011962 184 TSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSL 261 (474)
Q Consensus 184 ~s~~g~~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~~~~~~~~--~~tvGG~i~~~~~G~~ 261 (474)
||+.|++++.++||+|||++||+|+++|+++.+|+||||++|.+|+++|.++|+.++.+++. ++||||++++|++|..
T Consensus 85 t~~~g~~~~~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~ 164 (476)
T 3pm9_A 85 TGLVGGQTPHNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTA 164 (476)
T ss_dssp CCSSSTTCCCSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTT
T ss_pred CCCCCCccCCCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCc
Confidence 99999988866799999999999988999999999999999999999999999998887654 7999999999999999
Q ss_pred ccccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCchhH------------
Q 011962 262 AVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSV------------ 329 (474)
Q Consensus 262 s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~------------ 329 (474)
+.+||.++|+|++++||++||++++++....+++.||||+++++|++|+|||||+++||++|.|+...
T Consensus 165 ~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a 244 (476)
T 3pm9_A 165 ALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDA 244 (476)
T ss_dssp HHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHH
T ss_pred ccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHH
Confidence 99999999999999999999999998766667789999999999999999999999999999987543
Q ss_pred --------------------------------------------------------------------------------
Q 011962 330 -------------------------------------------------------------------------------- 329 (474)
Q Consensus 330 -------------------------------------------------------------------------------- 329 (474)
T Consensus 245 ~~~~~~~~~~~g~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~llve~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 324 (476)
T 3pm9_A 245 LKLLGIAQGEAAGNLTSFELIAETPLDFSVRHANNRDPLEARYPWYVLIELSSPRDDARAALESILERGFEDGIVVDAAI 324 (476)
T ss_dssp HHHHHHHHHHHGGGEEEEEEEEHHHHHHHHHHTTCCCCSSSCCSEEEEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHhcCCCceEEEecCHHHHHHHHhccCCCCCCCccCCeEEEEEEccCcHHHHHHHHHHHHHHHhcCCCcceEE
Confidence
Q ss_pred ----HHHHHHHHHHhcC-----CCcccccccccccchhHHHHHHHHHHHhhcC--CCeEEEEeecCCCCeeEEEEeCCC-
Q 011962 330 ----MRKEALWACFAME-----PSFEAMISDVCVPLSCLAELISRSKKELDAS--PLICTVIAHAGDGNFHTVILFDPS- 397 (474)
Q Consensus 330 ----~~~~~~w~~~~~~-----~~~~~~~~d~~vp~~~l~~~~~~~~~~~~~~--~l~~~~~gh~~~g~~h~~~~~~~~- 397 (474)
.+.+.+|..+... .....+.+|++||++++++++++++++++++ ++....|||+||||+|+++.++.+
T Consensus 325 a~~~~~~~~lW~~R~~~~~~~~~~g~~~~~Dv~vP~~~l~~~~~~~~~~~~~~~~~~~~~~~gH~gdGnlH~~i~~~~~~ 404 (476)
T 3pm9_A 325 ANSVQQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQANAAVVALIPGARPVPFGHLGDGNIHYNVSQPVGA 404 (476)
T ss_dssp CCSHHHHHHHHHHHHTHHHHTGGGCCEECCEEECCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTEEEEEEECCTTC
T ss_pred eCCHHHHHHHHHHHHHHHHHHhhcCCceeEEEEeeHHHHHHHHHHHHHHHHHhcCCCeEEEEEEeCCCceEEEEecCCcC
Confidence 1224567654321 1112467899999999999999999999998 899999999999999999998653
Q ss_pred ChH-HHHHHHHHHHHHHHHHHhcCCeeeecCCCCcchHHHHHHhcCHHHHHHHHHHHHhcCCCCCCCCCCee
Q 011962 398 KEE-DRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKLI 468 (474)
Q Consensus 398 ~~~-~~~~~~~l~~~i~~~~~~~gG~~s~ehg~G~~~~~~l~~~~g~~~~~~l~~iK~~~DP~gilNPGk~~ 468 (474)
+++ ..+.++++.+++.+.+.++||++++|||+|..|++|+.+++|++.++.|++||+.|||+|||||||+|
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~gGsis~EHGiG~~k~~~l~~~~~~~~~~~m~~iK~~~DP~~ilNPGki~ 476 (476)
T 3pm9_A 405 DKAEFLARWHDVSQVVFEVVLRLGGSISAEHGIGVMKRDELAEVKDKTAIELMRSIKALLDPHGIMNPGKVV 476 (476)
T ss_dssp CHHHHHTTHHHHHHHHHHHHHHTTCBSCSSSCCTTTTHHHHHHHSCHHHHHHHHHHHHHHCTTSCBSTTSCC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCEEEEcccCchhHHHHHHHhcCHHHHHHHHHHHHHhCcccCCCCCCcC
Confidence 232 24567789999999999999999999999999999999999999999999999999999999999986
No 2
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=5.2e-61 Score=526.73 Aligned_cols=360 Identities=25% Similarity=0.390 Sum_probs=294.8
Q ss_pred CCCCCCHHHHHHHHhhcCCCcccChhhhhhhcCCCC--Cc-----ccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEE
Q 011962 107 SHKEIPQELVDELKAICQDDMTMDYEERYIHGKPQN--SF-----HKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIP 179 (474)
Q Consensus 107 ~~~~~~~~~~~~L~~~~~~~v~~~~~~~~~~~~~~~--~~-----~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~ 179 (474)
+...++++++++|+++++. +.++.+++..|++..+ .+ ..+...|++||+|+|+|||+++|++|+++++||+|
T Consensus 156 p~~~~~~~~~~~l~~~~~~-~~~~~~~r~~h~~g~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvp 234 (658)
T 4bby_A 156 PPSIVNEDFLHELKKTNIS-YSQEADDRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIP 234 (658)
T ss_dssp CCCCCCHHHHHHHHHHTCE-EECCHHHHHHTSCCSCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCHHHHHHHHHhccc-ccCchHHHhhhcCCCCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEE
Confidence 4556789999999998754 5678777877654321 11 12235899999999999999999999999999999
Q ss_pred EcCCCCCCCCCcCC----CCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHHHHHccCCCeeCCCCCC--Cceecccc
Q 011962 180 YGGATSIEGHTLSP----NGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMC 253 (474)
Q Consensus 180 ~GgG~s~~g~~~~~----~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~~~~~~~~--~~tvGG~i 253 (474)
+|||||+.|++.++ .++|+|||++||+|++||+++.+++||||+++.+|+++|.++|+.++++|++ .+||||++
T Consensus 235 rGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~i 314 (658)
T 4bby_A 235 IGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWI 314 (658)
T ss_dssp ESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHH
T ss_pred ECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehh
Confidence 99999999887763 3479999999999999999999999999999999999999999999998876 59999999
Q ss_pred cccccCCCccccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCchhH----
Q 011962 254 ATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSV---- 329 (474)
Q Consensus 254 ~~~~~G~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~---- 329 (474)
++|++|..+.+||.+.|+|+++|||++||++++.+ ...+++.||||+++|+||+|+|||||++||||+|.|+...
T Consensus 315 Atna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~-~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~ 393 (658)
T 4bby_A 315 STRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSC-QGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSV 393 (658)
T ss_dssp HHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSC-CCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEE
T ss_pred hcCCCCCCccCcCCHHHheeeEEEEeCCCcccccc-cccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCcccccccc
Confidence 99999999999999999999999999999998764 4567789999999999999999999999999999997543
Q ss_pred -----------HH-------------------------------------------------------------------
Q 011962 330 -----------MR------------------------------------------------------------------- 331 (474)
Q Consensus 330 -----------~~------------------------------------------------------------------- 331 (474)
++
T Consensus 394 ~f~d~~~a~~av~~i~~~~~~psa~El~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~eg~ 473 (658)
T 4bby_A 394 AFPNFEQGVACLREIAKQRCAPASIRLMDNQQFQFGHALKPQVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLFEGD 473 (658)
T ss_dssp EESSHHHHHHHHHHHHHTTCCCSEEEEECHHHHHHHHHTSSCCCCTTCC--------------CCCTTTCEEEEEEEEEC
T ss_pred ccCCchhhhhhHHHHHHcCCCccccccccHHHHHHHHhhcccccccccccccchhhhhhhhhccCChHHHHHHHHHhccc
Confidence 00
Q ss_pred -------HH--------------------HHHHHH---------hcCCCcccccccccccchhHHHHHHHHHHHhhcC--
Q 011962 332 -------KE--------------------ALWACF---------AMEPSFEAMISDVCVPLSCLAELISRSKKELDAS-- 373 (474)
Q Consensus 332 -------~~--------------------~~w~~~---------~~~~~~~~~~~d~~vp~~~l~~~~~~~~~~~~~~-- 373 (474)
.. ..|... ...........|+++|++++.+++..+.+.+.+.
T Consensus 474 ~~~v~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~avP~~~l~~~~~~v~~~l~~~~~ 553 (658)
T 4bby_A 474 REKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGESFETSAPWDRVVDLCRNVKERIRRECK 553 (658)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEECCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcchhhhhHHHHHHHHhhHHHHHHhhccccCCccceEEEEeeHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000 0000011124588999999999998876665432
Q ss_pred -------CCeEEEEeecCCCCeeE--EEEeCCCC-hHHHHHHHHHHHHHHHHHHhcCCeeeecCCCCcchHHHHHHhcCH
Q 011962 374 -------PLICTVIAHAGDGNFHT--VILFDPSK-EEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGT 443 (474)
Q Consensus 374 -------~l~~~~~gh~~~g~~h~--~~~~~~~~-~~~~~~~~~l~~~i~~~~~~~gG~~s~ehg~G~~~~~~l~~~~g~ 443 (474)
++....++|+++++.|+ ++.++... .+..+..+++.+.+.+.+.++||++|+|||+|+.|++||.+++++
T Consensus 554 ~~g~~~~~~~~~~~~h~~dg~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~GGsiS~EHGIG~~k~~~l~~~~g~ 633 (658)
T 4bby_A 554 EKGVQFPPLSTCRVTQTYDAGACIYFYFAFNYRGISDPLAVFEQTEAAAREEILANGGSLSHHHGVGKLRKQWLKESISD 633 (658)
T ss_dssp HTTCSSCCEEEEEEEEECSSEEEEEEEEEEECTTCSCHHHHHHHHHHHHHHHHHHTTCCSCSSSCCTTTSGGGHHHHHCH
T ss_pred hcCccccccceEEEEEEeccCceEEEEecCCcCCchhHHHHHHHHHHHHHHHHHHcCCeEEEcccchHHHHHHHHHhcCH
Confidence 45667799999988554 44454432 233455677888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCee
Q 011962 444 GALETMKRIKVALDPNNIMNPGKLI 468 (474)
Q Consensus 444 ~~~~~l~~iK~~~DP~gilNPGk~~ 468 (474)
+.+++|++||++|||+|||||||++
T Consensus 634 ~~l~lmr~IK~a~DP~gILNPGKll 658 (658)
T 4bby_A 634 VGFGMLKSVKDYVDPTNIFGNRNLL 658 (658)
T ss_dssp HHHHHHHHHHHHHSTTCSSCSCCCC
T ss_pred HHHHHHHHHHHHhCcccCCCCCCCC
Confidence 9999999999999999999999986
No 3
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=1.9e-57 Score=490.85 Aligned_cols=360 Identities=27% Similarity=0.416 Sum_probs=271.4
Q ss_pred CCCCCCHHHHHHHHhhc-CCCcccChhhhhhhcCCC-----CCcc--cCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEE
Q 011962 107 SHKEIPQELVDELKAIC-QDDMTMDYEERYIHGKPQ-----NSFH--KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPII 178 (474)
Q Consensus 107 ~~~~~~~~~~~~L~~~~-~~~v~~~~~~~~~~~~~~-----~~~~--~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~ 178 (474)
+...++++++++|++++ +++|.++..++..|+++. +++. .....|.+||+|+|++||+++|++|+++++||+
T Consensus 86 p~~~~~~~~~~~L~~~l~g~~v~~~~~~~~~y~~d~~~~~~~~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~ 165 (584)
T 2uuu_A 86 DPPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVII 165 (584)
T ss_dssp CCCCCCHHHHHHHHTTSCGGGEECSHHHHHHTTCCSSHHHHHHHHTTCCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred CCCcCCHHHHHHHHhhcCCCeEEECHHHHHHhccCCchhhhhhhccCccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEE
Confidence 34456788999999999 877999988877776532 1111 123589999999999999999999999999999
Q ss_pred EEcCCCCCCCCCcCC---CCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHHHHHccCCCeeCCCCCC--Cceecccc
Q 011962 179 PYGGATSIEGHTLSP---NGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMC 253 (474)
Q Consensus 179 ~~GgG~s~~g~~~~~---~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~~~~~~~~--~~tvGG~i 253 (474)
++|||||+.|++.+. +++|+|||++||+|+++|+++.+|+||||++|.+|+++|.++|+.++++|+. .+||||++
T Consensus 166 ~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~i 245 (584)
T 2uuu_A 166 PMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWL 245 (584)
T ss_dssp EESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHH
T ss_pred EEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeec
Confidence 999999999888764 4679999999999988999999999999999999999999999999988864 58999999
Q ss_pred cccccCCCccccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCchhH----
Q 011962 254 ATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSV---- 329 (474)
Q Consensus 254 ~~~~~G~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~---- 329 (474)
++|++|..+.+||.++|+|++++||++||++++. ...++..||||+++++|++|+|||||+++||++|.|+...
T Consensus 246 a~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~--~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~ 323 (584)
T 2uuu_A 246 ATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELR--NGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGF 323 (584)
T ss_dssp HHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC---------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEE
T ss_pred cCCCCcccccCcCcHHHheeeEEEEeCCCCEEEC--CccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEE
Confidence 9999999999999999999999999999998742 1124568999999999999999999999999999997532
Q ss_pred --------------------------------HHH-------------------HH------------------------
Q 011962 330 --------------------------------MRK-------------------EA------------------------ 334 (474)
Q Consensus 330 --------------------------------~~~-------------------~~------------------------ 334 (474)
++. ..
T Consensus 324 ~f~~~~~a~~~~~~~~~~~~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llve~~g~~ 403 (584)
T 2uuu_A 324 LFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPK 403 (584)
T ss_dssp EESSHHHHHHHHHHHHHHTCCCSEEEEECHHHHHHHHHTCCSCCCTTCCHHHHHHHHHHHTTTSCTTTCEEEEEEEEECH
T ss_pred EcCCHHHHHHHHHHHHhcCCCceEEEEechhHHHHHhhccCcccccchhhhhhHHHhhhhccCCCCCccEEEEEEEecCh
Confidence 000 00
Q ss_pred ----------------------------HHHHHhc----------CCCcccccccccccchhHHHHHHHHHHH----hhc
Q 011962 335 ----------------------------LWACFAM----------EPSFEAMISDVCVPLSCLAELISRSKKE----LDA 372 (474)
Q Consensus 335 ----------------------------~w~~~~~----------~~~~~~~~~d~~vp~~~l~~~~~~~~~~----~~~ 372 (474)
+|..+.. .........|++||+++++++++++++. +++
T Consensus 404 ~~v~~~~~~~~~~~~~~g~~~~~~~~~~lW~~r~~~~~~l~~~~~~~g~~~~~~Dv~VP~~~l~~~~~~~~~~l~~~~~~ 483 (584)
T 2uuu_A 404 KVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKD 483 (584)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEESTTHHHHGGGGHHHHHHHHHTTTEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCccchHHHHHHHHHhhhchHHHHhhhcccCCccccceEEeeHHHHHHHHHHHHHHHHhHHHh
Confidence 0110000 0000012358899999999999998877 677
Q ss_pred CCCeEEEEe---ecCCCC--eeEEEEeCCCChHHHHHHHHHHHHHHHHHHhcCCeeeecCCCCcchHHHHHHhcCHHHHH
Q 011962 373 SPLICTVIA---HAGDGN--FHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALE 447 (474)
Q Consensus 373 ~~l~~~~~g---h~~~g~--~h~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~gG~~s~ehg~G~~~~~~l~~~~g~~~~~ 447 (474)
+++...+++ |++|++ +|+++.++...++..++.+++.+.+.+.++++||++++|||+|+.|++|+.+++|++.++
T Consensus 484 ~g~~~~~~~h~gH~gd~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gGsiS~EHGiG~~k~~~l~~~~g~~~~~ 563 (584)
T 2uuu_A 484 QGIPAWICAHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWMTRYATRGWIN 563 (584)
T ss_dssp TTCCEEEEEEEEEEETTEEEEEEEEEEECCTTCCTHHHHHHHHHHHHHHHHTTCCCC------------------CTHHH
T ss_pred cCCeeEEEEEEEeecCCCcEEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCcEEecccCCcccHHHHHHhcCHHHHH
Confidence 788775554 556654 555566553333333556778889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCee
Q 011962 448 TMKRIKVALDPNNIMNPGKLI 468 (474)
Q Consensus 448 ~l~~iK~~~DP~gilNPGk~~ 468 (474)
.|++||+.|||+|||||||+|
T Consensus 564 lmr~iK~a~DP~gIlNPGki~ 584 (584)
T 2uuu_A 564 VYRSLKETIDPKDICNPRKLI 584 (584)
T ss_dssp HHHHHHHHHCTTCCBSCCCC-
T ss_pred HHHHHHHHcCCCcCCCCCCCC
Confidence 999999999999999999986
No 4
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=100.00 E-value=5.8e-52 Score=447.45 Aligned_cols=344 Identities=23% Similarity=0.354 Sum_probs=279.4
Q ss_pred HHHHHHHhhcCC-CcccChhhhhh----hcCC-----CCCc-ccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcC
Q 011962 114 ELVDELKAICQD-DMTMDYEERYI----HGKP-----QNSF-HKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGG 182 (474)
Q Consensus 114 ~~~~~L~~~~~~-~v~~~~~~~~~----~~~~-----~~~~-~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~Gg 182 (474)
+++++|++++++ +|.+++.++.. |+.+ .++. ...++.|.+||+|+|++||+++|++|+++++||+++|+
T Consensus 23 ~~~~~L~~~~g~~~v~~d~~~~~~~~~~y~~d~~~~d~~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~ 102 (560)
T 1e8g_A 23 EFIQDIIRIVGSENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISI 102 (560)
T ss_dssp HHHHHHHHHHCGGGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHHhhCcccEecCHHHhhhhhhhhccccccccccccccccccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 478999999985 79898888777 6544 1111 12356899999999999999999999999999999999
Q ss_pred CCCCC-CCCcC-CCCcEEEEc-CCCCCcEEeecCCCeEecCCCCcHHHHHHHHccCCCe--eCCCCCC--Cceecccccc
Q 011962 183 ATSIE-GHTLS-PNGGVCIDL-SLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF--FPLDPGP--GATIGGMCAT 255 (474)
Q Consensus 183 G~s~~-g~~~~-~~~givIdl-~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~--~~~~~~~--~~tvGG~i~~ 255 (474)
|||+. |++.+ .++||+||| ++||+|+++|+++.+|+||||+++.+|+++|.++|+. +++++.. .+||||++++
T Consensus 103 Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~ 182 (560)
T 1e8g_A 103 GRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVE 182 (560)
T ss_dssp CCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHT
T ss_pred CCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccC
Confidence 99986 77665 368999999 9999998899999999999999999999999999999 8766543 6899999999
Q ss_pred cccCCCccccccccceEEEEEEEecCCeEEEcccccccC-------------------------cCCCchhhhhhccCCC
Q 011962 256 RCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKS-------------------------AAGYDLTRLIIGSEGT 310 (474)
Q Consensus 256 ~~~G~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~-------------------------~~g~dl~~~~~Gs~G~ 310 (474)
|+.|.. +||.++|+|++++||++||++++++....++ ..|||+..++. +|+
T Consensus 183 ~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~--~Gt 258 (560)
T 1e8g_A 183 RGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFS--QSN 258 (560)
T ss_dssp TCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGS--SSS
T ss_pred CCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccc--cCc
Confidence 998875 9999999999999999999999987644333 35889988875 579
Q ss_pred eeEEEEEEEEeEecCchhH-------------------------------------HHH------------------HH-
Q 011962 311 LGIITEVTLRLQKIPQHSV-------------------------------------MRK------------------EA- 334 (474)
Q Consensus 311 lGIIt~~tlkl~p~p~~~~-------------------------------------~~~------------------~~- 334 (474)
|||||++||||+|.|+... ... ..
T Consensus 259 lGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~p~~~el~d~~~~~~~l~~~~~~~~~~~~~p~~~ 338 (560)
T 1e8g_A 259 MGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLRLGMALQNVPTIRHILLDAAVLGDKRSYSSRTEPLSDEE 338 (560)
T ss_dssp SEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHHHTTSSCSCCEEEEHHHHHHHHCCGGGTCCCSSCCCHHH
T ss_pred EEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHHHcCCCcceeEEechHHHhhhhhhhhhhccCCCCCCHHH
Confidence 9999999999999987533 000 00
Q ss_pred ----------------------------HHHH---------------------------H-hcC---CCcc---------
Q 011962 335 ----------------------------LWAC---------------------------F-AME---PSFE--------- 346 (474)
Q Consensus 335 ----------------------------~w~~---------------------------~-~~~---~~~~--------- 346 (474)
.|.. + ... |...
T Consensus 339 ~~~l~~~~~~~~~~l~~e~~g~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~e~~~~w~R~~~~~~~p~~~~~~~~~~~~ 418 (560)
T 1e8g_A 339 LDKIAKQLNLGRWNFYGALYGPEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLP 418 (560)
T ss_dssp HHHHHHHHTCCSEEEEEEEESCHHHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHHHHHHTTTCCCCGGGGGGGGST
T ss_pred HHHHHhhcCCCceEEEEEEeCCHHHHHHHHHHHHHHHHhCCCceeeccccchhhhhHHHHHhhcccCchhhhhccccccC
Confidence 0000 0 000 1000
Q ss_pred ---cccccccccc--hhHHHHHHHHHHHhhcCCCeEEEEeecCCCCeeEEE--EeCCCChHHHHHHHHHHHHHHHHHHhc
Q 011962 347 ---AMISDVCVPL--SCLAELISRSKKELDASPLICTVIAHAGDGNFHTVI--LFDPSKEEDRQEAERLNRFMVHTALSM 419 (474)
Q Consensus 347 ---~~~~d~~vp~--~~l~~~~~~~~~~~~~~~l~~~~~gh~~~g~~h~~~--~~~~~~~~~~~~~~~l~~~i~~~~~~~ 419 (474)
.+..|.++|+ ++++++++.++++++++++....+||++|||+|+++ +++..++++.++++++.+++.+.+
T Consensus 419 ~~~~~~~d~~vP~~~~~l~~~~~~~~~~~~~~g~~~~~~gH~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~l~~~~--- 495 (560)
T 1e8g_A 419 NGAHLFFSPIAKVSGEDAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDDC--- 495 (560)
T ss_dssp TEEEEEECBEECSSHHHHHHHHHHHHHHHHHHTCCCCEEEEECSSCEEEEEEEEEETTCHHHHHHHHHHHHHHHHHH---
T ss_pred CCceEEEeeecCCCHHHHHHHHHHHHHHHHHcCCceEEEEEecCCeEEEEecccCCCCCHHHHHHHHHHHHHHHHHH---
Confidence 1114678888 999999999999999999999999999999999998 577778877778888888888776
Q ss_pred CCeeeecCCCCcchHH--HH---HHhc---CHHHHHHHHHHHHhcCCCCCCCCCCeeC
Q 011962 420 EGTCTGEHGIGTGKMK--YL---EKEL---GTGALETMKRIKVALDPNNIMNPGKLIP 469 (474)
Q Consensus 420 gG~~s~ehg~G~~~~~--~l---~~~~---g~~~~~~l~~iK~~~DP~gilNPGk~~~ 469 (474)
.|||+|..|.+ |+ .+++ |++.++.|++||++|||+|||||||+++
T Consensus 496 -----~eHGiG~~k~~~~~l~~~~~~~~~~g~~~~~lm~~iK~~~DP~gILNPGk~~~ 548 (560)
T 1e8g_A 496 -----AANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNAVDPNGIIAPGKSGV 548 (560)
T ss_dssp -----HHTTCCBSCCCGGGHHHHHHHTCHHHHHHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred -----HHcCCcccccchhHHHHHHHHhccCCHHHHHHHHHHHHHcCccCCCCCCcccc
Confidence 48999998887 88 8999 8889999999999999999999999995
No 5
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=2e-50 Score=432.27 Aligned_cols=346 Identities=22% Similarity=0.300 Sum_probs=277.9
Q ss_pred HHHHHHHhhcCC-CcccChhhhhhhcCCCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCC-CCCc
Q 011962 114 ELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE-GHTL 191 (474)
Q Consensus 114 ~~~~~L~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~-g~~~ 191 (474)
+++++|++++++ +|.++...+..|+.+++.....++.|.+||+|+|++||+++|++|+++++||+++|+|||+. |++.
T Consensus 19 ~~~~~L~~~l~~~~v~~~~~~~~~y~~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~ 98 (520)
T 1wvf_A 19 KAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAA 98 (520)
T ss_dssp HHHHHHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTS
T ss_pred HHHHHHHHhcCCCeEecCcHHHHHHhcccccccccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCC
Confidence 567899999985 58888777777877765432245689999999999999999999999999999999999997 7665
Q ss_pred C-CCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHHHHHccCCCeeCCC--CCC-CceecccccccccCCCcccccc
Q 011962 192 S-PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLD--PGP-GATIGGMCATRCSGSLAVRYGT 267 (474)
Q Consensus 192 ~-~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~~~~~--~~~-~~tvGG~i~~~~~G~~s~~yG~ 267 (474)
+ ..+||+|||++||+|+++|+++.+|+||||++|.+|+++|.++|+.++.+ |.. .++|||++++|++|.. +||.
T Consensus 99 ~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~ 176 (520)
T 1wvf_A 99 PVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGE 176 (520)
T ss_dssp CSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCB
T ss_pred CCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cccc
Confidence 4 36799999999999988999999999999999999999999999998876 333 5999999999998885 9999
Q ss_pred ccceEEEEEEEecCCeEEEcccccccC---------cCCCchhhhhhccCCCeeEEEEEEEEeEecCchhH---------
Q 011962 268 MRDNVINLKVVLANGDVVKTASRARKS---------AAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSV--------- 329 (474)
Q Consensus 268 ~~d~V~~~~vVl~dG~i~~~~~~~~~~---------~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~--------- 329 (474)
++|+|++++||++||++++++....++ ..||||..+|.| ++|||||+++||++|.|+...
T Consensus 177 ~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g--~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~ 254 (520)
T 1wvf_A 177 HFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQ--ANYGICTKMGFWLMPKPPVFKPFEVIFEDE 254 (520)
T ss_dssp GGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTT--SSSCEEEEEEEECEECCSEEEEEEEEECCG
T ss_pred hhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccC--CceEEEEEEEEEEEecCCeEEEEEEEeCCH
Confidence 999999999999999999986432221 358888888765 499999999999999987532
Q ss_pred ------------------------------H---HH---------------H----------------------------
Q 011962 330 ------------------------------M---RK---------------E---------------------------- 333 (474)
Q Consensus 330 ------------------------------~---~~---------------~---------------------------- 333 (474)
+ .. +
T Consensus 255 ~~~~~~~~~~~~~~~~~~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~v~ 334 (520)
T 1wvf_A 255 ADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYGTQEQVD 334 (520)
T ss_dssp GGHHHHHHHHHHHHHTTSSCSCEEEEEHHHHHHHTTCCGGGTCCCSSSCCHHHHHHHHHHHCCCSEEEEEEEEESHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccceEeccHHHHHHHhcccchhhccCCCCCCHHHHHHHHHhcCCCceEEEEEEeCCHHHHH
Confidence 0 00 0
Q ss_pred HHHHH-Hh-c---C--------------------------CCcc------------cccccccccc--hhHHHHHHHHHH
Q 011962 334 ALWAC-FA-M---E--------------------------PSFE------------AMISDVCVPL--SCLAELISRSKK 368 (474)
Q Consensus 334 ~~w~~-~~-~---~--------------------------~~~~------------~~~~d~~vp~--~~l~~~~~~~~~ 368 (474)
..|.. .. . . +... .+..|.++|. ++++++++.+.+
T Consensus 335 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~w~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~vp~~~~~l~~~~~~~~~ 414 (520)
T 1wvf_A 335 VNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQAAMAKR 414 (520)
T ss_dssp HHHHHHHHHHHHHTCCEEEEHHHHTTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEecccchhhhHHHHHHHhhccCchhhhhccccccCCCceEEeccccCCCHHHHHHHHHHHHH
Confidence 00110 00 0 0 0000 0113455677 899999999999
Q ss_pred HhhcCCCeEEEEeecCCCCeeEEE--EeCCCChHHHHHHHHHHHHHHHHHHhcCCeeeecCCCCcch--HHHH---HHhc
Q 011962 369 ELDASPLICTVIAHAGDGNFHTVI--LFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGK--MKYL---EKEL 441 (474)
Q Consensus 369 ~~~~~~l~~~~~gh~~~g~~h~~~--~~~~~~~~~~~~~~~l~~~i~~~~~~~gG~~s~ehg~G~~~--~~~l---~~~~ 441 (474)
+++++++....+||+++||+|+++ .++..++++.++++++.+++.+.+ .|||+|..| .+|+ .+++
T Consensus 415 ~~~~~~~~~~~~gh~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ehG~G~~k~~~~~~~~~~~~~ 486 (520)
T 1wvf_A 415 VLHKYGLDYVAEFIVAPRDMHHVIDVLYDRTNPEETKRADACFNELLDEF--------EKEGYAVYRVNTRFQDRVAQSY 486 (520)
T ss_dssp HHHHTTCCCCEEEEECSSEEEEEEEEEEETTCHHHHHHHHHHHHHHHHHH--------HHTTCCBSCCCGGGHHHHHHHT
T ss_pred HHHHcCCCeeEeecccCcceeeeeccccCCCCHHHHHHHHHHHHHHHHHH--------HHcCCCccccChhHhhhhhhhc
Confidence 999999999999999999999987 677777776677778888887775 457777765 3466 9999
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCCeeCCC
Q 011962 442 GTGALETMKRIKVALDPNNIMNPGKLIPPH 471 (474)
Q Consensus 442 g~~~~~~l~~iK~~~DP~gilNPGk~~~~~ 471 (474)
|++.+++|++||++|||+|||||||+++.+
T Consensus 487 g~~~~~lmr~IK~a~DP~~IlNPGki~~~~ 516 (520)
T 1wvf_A 487 GPVKRKLEHAIKRAVDPNNILAPGRSGIDL 516 (520)
T ss_dssp CHHHHHHHHHHHHHHCTTCCBCTTGGGCCT
T ss_pred CHHHHHHHHHHHHHcCCCCCCCCCcCCCCc
Confidence 999999999999999999999999999644
No 6
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=100.00 E-value=2.2e-52 Score=448.82 Aligned_cols=339 Identities=19% Similarity=0.212 Sum_probs=279.5
Q ss_pred CHHHHHHHHhhcC-CCcccChhhhhhhcCCCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCC
Q 011962 112 PQELVDELKAICQ-DDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT 190 (474)
Q Consensus 112 ~~~~~~~L~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~ 190 (474)
.++++++|+++++ ++|.+++..+..|..++.. ..+.|.+||+|+|++||+++|++|+++++||+++|||||+.|++
T Consensus 9 ~~~~~~~L~~~~g~~~v~~~~~~~~~y~~d~~~---~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~ 85 (571)
T 1f0x_A 9 NKAFLNELARLVGSSHLLTDPAKTARYRKGFRS---GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGS 85 (571)
T ss_dssp CHHHHHHHHHHHCGGGEECCHHHHHHHHBCSSS---CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTT
T ss_pred hHHHHHHHHHhcCCCeEEcCHHHHHHHhccccc---cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCc
Confidence 3568899999998 4798988777777766542 34689999999999999999999999999999999999999998
Q ss_pred cCCC-----CcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHHHHHccCCCeeCCCCC---CCceecccccccccCCCc
Q 011962 191 LSPN-----GGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG---PGATIGGMCATRCSGSLA 262 (474)
Q Consensus 191 ~~~~-----~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~~~~~~~---~~~tvGG~i~~~~~G~~s 262 (474)
.+.+ ++|+|||++||+|+++| ++.+|+||||++|.+|+++|.++|+.+|.+++ +.+||||++++|++|..+
T Consensus 86 ~~~~~~~~r~gvvIdl~rmn~I~~id-~~~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~ 164 (571)
T 1f0x_A 86 TPNGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLV 164 (571)
T ss_dssp SCCBSCCSSCEEEEECTTCCCEEEET-TTTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCT
T ss_pred cCCCcCCcCceEEEECcccCCceeEC-CCCeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccc
Confidence 8754 38999999999998898 46789999999999999999999998877664 357999999999999999
Q ss_pred cccccccc----------------eEEEEEEEecCCeEEEcccccc------------cCcCCC----------------
Q 011962 263 VRYGTMRD----------------NVINLKVVLANGDVVKTASRAR------------KSAAGY---------------- 298 (474)
Q Consensus 263 ~~yG~~~d----------------~V~~~~vVl~dG~i~~~~~~~~------------~~~~g~---------------- 298 (474)
.+||.+.| +|++++||++||+++++..... +++.||
T Consensus 165 ~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~ 244 (571)
T 1f0x_A 165 QRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYN 244 (571)
T ss_dssp TSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCT
T ss_pred cCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCccccccccccccccccc
Confidence 99999999 9999999999999998753321 466788
Q ss_pred -chhhhh--hccCCCeeEEEEEEEEeEecCchhH----------------------------------------H-HH--
Q 011962 299 -DLTRLI--IGSEGTLGIITEVTLRLQKIPQHSV----------------------------------------M-RK-- 332 (474)
Q Consensus 299 -dl~~~~--~Gs~G~lGIIt~~tlkl~p~p~~~~----------------------------------------~-~~-- 332 (474)
||++++ +|++|+||| |+++||++|.|+... . +.
T Consensus 245 ~Dl~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~a~E~~d~~~~~~~~~~~~ 323 (571)
T 1f0x_A 245 ADPDRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGK 323 (571)
T ss_dssp TCGGGCCSSTTCTTSSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHHHHCSSCCSEEEEEEHHHHHHHC----
T ss_pred ccHHHHHHhcCCCCceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhcc
Confidence 999999 999999999 999999999987543 0 00
Q ss_pred ---------H--HH------------------H----------------------------H------------------
Q 011962 333 ---------E--AL------------------W----------------------------A------------------ 337 (474)
Q Consensus 333 ---------~--~~------------------w----------------------------~------------------ 337 (474)
. .. + .
T Consensus 324 ~~~~~i~~~~~~~~p~~~~~k~~~~~~~~~~p~l~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~llve~~g~~~~~ 403 (571)
T 1f0x_A 324 DTFLMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMAGDGVGE 403 (571)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHCSEEEEEEECTTHHHH
T ss_pred cccccccccCcccccchhcccchhhhhhcccccccccchhhhhhhhhhccccccchhhhcccccCceEEEEEEecCcHHH
Confidence 0 00 0 0
Q ss_pred ----------------------------------------HHhcCCCc--ccccccccccchhHHHHHHHHHHHhhcCCC
Q 011962 338 ----------------------------------------CFAMEPSF--EAMISDVCVPLSCLAELISRSKKELDASPL 375 (474)
Q Consensus 338 ----------------------------------------~~~~~~~~--~~~~~d~~vp~~~l~~~~~~~~~~~~~~~l 375 (474)
.+...... ..+..|+++|+++++++ +++.+++++.++
T Consensus 404 ~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~R~~~~~~~~~~r~~~~~~~g~~~~~Dvavp~~~l~~~-~~~~~~l~~~~~ 482 (571)
T 1f0x_A 404 AKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWY-EHLPPEIDSQLV 482 (571)
T ss_dssp HHHHHHHHHHHSSCEEEECCHHHHHHHHHHHTTHHHHHHHHHHHTTTTEEEEEEEEEECCTTCSCCS-CCCCHHHHTTEE
T ss_pred HHHHHHHHHHHcCCCeeecCccHHHHHHHHhhhhhhHHHHhhhcchhhcCCceEEEEEecHHHhHHH-HHHHHHHHhhCc
Confidence 00000000 12457889999999999 888888888888
Q ss_pred eEEEEeecCCCCeeEEEEeCCCChHHHHHHHHHHHHHHHHHHhcCCeeeecCCCCcchHHHHHHhcCHHHHHHHHHHHHh
Q 011962 376 ICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVA 455 (474)
Q Consensus 376 ~~~~~gh~~~g~~h~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~gG~~s~ehg~G~~~~~~l~~~~g~~~~~~l~~iK~~ 455 (474)
....+||+++||+|+++.++.+.. .+++.+.+.+.+.++||++++|||+|.. | +.+.. |++||++
T Consensus 483 ~~~~~GH~g~g~~H~~~~~~~~~~-----~~~i~~~~~~~v~~~GGsisaEHGvG~~---~-----~~~~~--m~~iK~~ 547 (571)
T 1f0x_A 483 HKLYYGHFMCYVFHQDYIVKKGVD-----VHALKEQMLELLQQRGAQYPAEHNVGHL---Y-----KAPET--LQKFYRE 547 (571)
T ss_dssp EEEEEEETTTTEEEEEEEEETTCC-----HHHHHHHHHHHHHHTTCBSCSSSCCTTT---S-----CCCHH--HHHHHHH
T ss_pred cceeEEEEcCCceEEeeecCCchh-----HHHHHHHHHHHHHHcCCeEEeeccCCcc---c-----CCHHH--HHHHHHH
Confidence 889999999999999998854321 3568888999999999999999999995 2 22222 9999999
Q ss_pred cCCCCCCCCCCeeCCC
Q 011962 456 LDPNNIMNPGKLIPPH 471 (474)
Q Consensus 456 ~DP~gilNPGk~~~~~ 471 (474)
|||+|||||||++.+.
T Consensus 548 ~DP~~ilNPGk~~t~~ 563 (571)
T 1f0x_A 548 NDPTNSMNPGIGKTSK 563 (571)
T ss_dssp HCTTCCBSTTTTTCCC
T ss_pred hCCCCCCCCCcCcCCc
Confidence 9999999999999764
No 7
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.1e-45 Score=396.81 Aligned_cols=344 Identities=15% Similarity=0.235 Sum_probs=258.8
Q ss_pred HHHHHHHHh-hcCCCcccChhhhhhhcCCCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhc--C-CCcEEEEcCCCCCCC
Q 011962 113 QELVDELKA-ICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDK--H-KVPIIPYGGATSIEG 188 (474)
Q Consensus 113 ~~~~~~L~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~--~-~~~v~~~GgG~s~~g 188 (474)
++++++|++ .+.+++.+++.....|+.+++.. ..+.|.+|++|+|++||+++|++|++ + ++||+++|+|||+.|
T Consensus 32 ~~~~~~l~~~~~~~~v~~~~~~~~~~~~d~~~~--~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g 109 (534)
T 1w1o_A 32 RPWPASLAALALDGKLRTDSNATAAASTDFGNI--TSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMG 109 (534)
T ss_dssp --------CTTTTTCEECSHHHHHHTSCCTTCS--CCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSS
T ss_pred HHHHHHHHhcCCCceEecCHHHHHHHhcccccc--ccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Confidence 356678888 55678989888887787776543 34689999999999999999999997 6 999999999999998
Q ss_pred CCcCCCCcEEEEcCCCCCc-----EEeecCCCeEecCCCCcHHHHHHHHccCCCeeCCCCC-CCceecccccccccCCCc
Q 011962 189 HTLSPNGGVCIDLSLMKSV-----KALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG-PGATIGGMCATRCSGSLA 262 (474)
Q Consensus 189 ~~~~~~~givIdl~~m~~i-----~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~~~~~~~-~~~tvGG~i~~~~~G~~s 262 (474)
++.+ .+|++|||++||+| +++|.++.+|+||||++|.+|++++.++|+..+..++ ..+||||++++|++|..+
T Consensus 110 ~~~~-~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~ 188 (534)
T 1w1o_A 110 QAFA-PGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQA 188 (534)
T ss_dssp TTCC-TTSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTH
T ss_pred CcCC-CCeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCccccc
Confidence 8876 47999999999998 7899888999999999999999999999997554433 479999999999999999
Q ss_pred cccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCchhH-------------
Q 011962 263 VRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSV------------- 329 (474)
Q Consensus 263 ~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~------------- 329 (474)
.+||.++|+|++++||++||++++++.. .++||+|+++|++|+|||||+++||++|.|+...
T Consensus 189 ~~yG~~~d~v~~~evV~~dG~v~~~~~~-----~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~ 263 (534)
T 1w1o_A 189 FRHGPQISNVLEMDVITGHGEMVTCSKQ-----LNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFS 263 (534)
T ss_dssp HHHCCGGGSEEEEEEEETTSCEEEEESS-----SSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHH
T ss_pred cccccHhhhEEEEEEEeCCccEEEECCC-----CChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHH
Confidence 9999999999999999999999988643 5789999999999999999999999999987521
Q ss_pred --HHH-----H------------------------HHHHHH----------------h----------------c-CC--
Q 011962 330 --MRK-----E------------------------ALWACF----------------A----------------M-EP-- 343 (474)
Q Consensus 330 --~~~-----~------------------------~~w~~~----------------~----------------~-~~-- 343 (474)
.+. . .-|... . . ..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ie~~~~~~g~~~~~ 343 (534)
T 1w1o_A 264 ADQERLTAPRPGGGGASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAA 343 (534)
T ss_dssp HHHHHHHCBC------CBCSCSEEEEEEEEGGGHHHHHHTTSSSCHHHHHHHHHHHHHTTCSEEEEEEEEEEC-------
T ss_pred HHHHHHHhcccccccccccchhHhhhhhhcccccccccccccccCccccccccccccccccceEEEEEEEEecCCCccch
Confidence 000 0 000000 0 0 00
Q ss_pred C-----------------c---c------cc----------------------cccccccchhHHHHHHHHHHHhhc-CC
Q 011962 344 S-----------------F---E------AM----------------------ISDVCVPLSCLAELISRSKKELDA-SP 374 (474)
Q Consensus 344 ~-----------------~---~------~~----------------------~~d~~vp~~~l~~~~~~~~~~~~~-~~ 374 (474)
. . . .+ ..|+++|+++++++++++.+.+.+ .+
T Consensus 344 ~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~w~~r~~~~~~~~~~~~d~~vP~s~l~~~~~~~~~~l~~~~~ 423 (534)
T 1w1o_A 344 AAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTD 423 (534)
T ss_dssp CHHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSSCCCCEEEEEEGGGHHHHHHHHTTTTTTTSC
T ss_pred hhhHHHHHHHHHhhcccCCcceeccchHHHHhhhhhhhHHHHhhccccccCCccccEEecHHHHHhHHHHHHHHHhhccC
Confidence 0 0 0 00 015678888888888877653333 22
Q ss_pred C-----eEEEEee---------cCCCCeeEEEEeCCC--ChHHHHHHHHHHHHHHHHHHhcC---C-eeeecCCCCcchH
Q 011962 375 L-----ICTVIAH---------AGDGNFHTVILFDPS--KEEDRQEAERLNRFMVHTALSME---G-TCTGEHGIGTGKM 434 (474)
Q Consensus 375 l-----~~~~~gh---------~~~g~~h~~~~~~~~--~~~~~~~~~~l~~~i~~~~~~~g---G-~~s~ehg~G~~~~ 434 (474)
. .....|| .+++|.|+++.+... ++...++.+++.+++.+.+.+.+ | .+..+| ...
T Consensus 424 ~~~~~~~~~~~gh~~~~~~s~v~~dgn~h~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~yl~~~~----~~~ 499 (534)
T 1w1o_A 424 IVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHT----DRS 499 (534)
T ss_dssp CCSCEEEEEEEGGGSCTTSSCCCCSSSEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHTTCCCEESSCCCS----SHH
T ss_pred CcccEEEeecccccccccccccCCCccEEEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhCCCcEEECCCCC----ChH
Confidence 1 1223477 689999999887653 22333445677788888887764 2 223334 266
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCCCCCCC-eeC
Q 011962 435 KYLEKELGTGALETMKRIKVALDPNNIMNPGK-LIP 469 (474)
Q Consensus 435 ~~l~~~~g~~~~~~l~~iK~~~DP~gilNPGk-~~~ 469 (474)
+| .++||++++++|++||++|||+||||||| ||+
T Consensus 500 ~w-~~~~G~~~~~~l~~iK~~~DP~~ilnpgk~I~~ 534 (534)
T 1w1o_A 500 DW-VRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN 534 (534)
T ss_dssp HH-HHHHCHHHHHHHHHHHHHHCTTCCBCGGGCSCC
T ss_pred HH-HHHhCHHHHHHHHHHHHhcCchhhcCCCCcCCC
Confidence 77 46899889999999999999999999999 654
No 8
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=4.8e-46 Score=398.23 Aligned_cols=206 Identities=27% Similarity=0.413 Sum_probs=173.8
Q ss_pred CCHHHHHHHHhhcCCCcccChhhhhhhcCCCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhc-CCCcEEEEcCCCCCCCC
Q 011962 111 IPQELVDELKAICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDK-HKVPIIPYGGATSIEGH 189 (474)
Q Consensus 111 ~~~~~~~~L~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~-~~~~v~~~GgG~s~~g~ 189 (474)
+.+.++++|+ +.++|.+++..+..|+.++.+.+ ...|.+|++|+|++||+++|++|++ +++||+++|+|||+.|+
T Consensus 26 ~~~~~~~~l~--~~~~v~~d~~~~~~~~~d~~~~~--~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~ 101 (524)
T 2exr_A 26 STDGVSESLN--IQGEILCGGAAADIAGRDFGGMN--CVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQ 101 (524)
T ss_dssp --------CC--CSSEEECSHHHHHHHTCCTTCCC--CCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSST
T ss_pred cHHHHHHhcC--CCCeEEeCHHHHHHHhccccccc--cCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCc
Confidence 3445667777 46789999888888888765543 3589999999999999999999995 99999999999999988
Q ss_pred CcCCCCcEEEEcCCCCCcEEeec-----CC--CeEecCCCCcHHHHHH-HHccCCCeeCCCCC--CCceecccccccccC
Q 011962 190 TLSPNGGVCIDLSLMKSVKALHI-----ED--MDVVVEPGIGWMELNE-YLEPYGLFFPLDPG--PGATIGGMCATRCSG 259 (474)
Q Consensus 190 ~~~~~~givIdl~~m~~i~~id~-----~~--~~v~V~aGv~~~~L~~-~l~~~Gl~~~~~~~--~~~tvGG~i~~~~~G 259 (474)
+.+. +||+|||++||+| ++|. ++ .+|+||||++|.++.+ .++++|+. +.++. ..+||||++++|++|
T Consensus 102 ~~~~-~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~va~ng~G 178 (524)
T 2exr_A 102 AMAE-GGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTLSNAGVS 178 (524)
T ss_dssp TCCT-TSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHHTTCCCC
T ss_pred ccCC-CEEEEECcCCCCc-EEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccCCCCCCc
Confidence 8764 7999999999999 6777 55 7899999999999754 55599998 44443 359999999999999
Q ss_pred CCccccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCchh
Q 011962 260 SLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHS 328 (474)
Q Consensus 260 ~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~ 328 (474)
..+.+||.++|+|++++||++||++++++.. .++||+++++||+|+|||||++||||+|.|+..
T Consensus 179 ~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~-----~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~ 242 (524)
T 2exr_A 179 GQAFRYGPQTSNVTELDVVTGNGDVVTCSEI-----ENSELFFSVLGGLGQFGIITRARVLLQPAPDMV 242 (524)
T ss_dssp TTHHHHCCGGGSEEEEEEEETTSCEEEEESS-----SSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEE
T ss_pred ccccccCcHhhhEEEEEEEecCCeEEEECCC-----CChhHHhHhhcCCCccEEEEEEEEEEEEcCCee
Confidence 9999999999999999999999999998643 578999999999999999999999999999753
No 9
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=6.5e-40 Score=349.40 Aligned_cols=211 Identities=23% Similarity=0.285 Sum_probs=173.8
Q ss_pred CCHHHHHHHHhhcCCC-cccChhhhhhh---cCCCC--CcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCC
Q 011962 111 IPQELVDELKAICQDD-MTMDYEERYIH---GKPQN--SFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGAT 184 (474)
Q Consensus 111 ~~~~~~~~L~~~~~~~-v~~~~~~~~~~---~~~~~--~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~ 184 (474)
..+++++.|.+.++.. |.++.+..|.. .+..+ +.......|.+||+|+|++||+++|++|+++++||++|||||
T Consensus 7 ~~~~f~~~L~~~~~~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~gGh 86 (500)
T 3tsh_A 7 AKEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSGGH 86 (500)
T ss_dssp --CHHHHHHHHHSCGGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCC
T ss_pred cHHHHHHHHHhhCCCCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCc
Confidence 3457899999988764 55555444321 11111 111223579999999999999999999999999999999999
Q ss_pred CCCCCCc---CCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHHHHHccCCCe--eCCCCCCCceecccccccccC
Q 011962 185 SIEGHTL---SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF--FPLDPGPGATIGGMCATRCSG 259 (474)
Q Consensus 185 s~~g~~~---~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~--~~~~~~~~~tvGG~i~~~~~G 259 (474)
++.|.+. ..++|++|||++||+| ++|+++.+|+||||++|.||+++|.++|+. ++.+.++.++|||++++||+|
T Consensus 87 ~~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g 165 (500)
T 3tsh_A 87 DYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFG 165 (500)
T ss_dssp CTTCTTTCCSSSCCEEEEECTTCCCE-EEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCC
T ss_pred CCCCCcCCCCCcCCeEEEECcCCCCE-EECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCC
Confidence 9987654 3467999999999998 499999999999999999999999998854 566777789999999999999
Q ss_pred CCccccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhhcc-CCCeeEEEEEEEEeEecCchh
Q 011962 260 SLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGS-EGTLGIITEVTLRLQKIPQHS 328 (474)
Q Consensus 260 ~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~Gs-~G~lGIIt~~tlkl~p~p~~~ 328 (474)
..+++||..+|+|+++|||++||+++... . .+.||||+++|+ +|+|||||++|||++|.|+..
T Consensus 166 ~~~~~~G~~~d~v~~~~vV~a~G~i~~~~-~-----~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~ 229 (500)
T 3tsh_A 166 MLLRKYGIAAENVIDVKLVDANGKLHDKK-S-----MGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTV 229 (500)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTSCEECHH-H-----HCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCE
T ss_pred ccccccCChhhheeeEEEECCCceEEECC-C-----CChHHHHHHHhhcccceEEEEEEEEEEEeCCCeE
Confidence 99999999999999999999999988532 1 456999999955 679999999999999998753
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.9e-37 Score=327.13 Aligned_cols=174 Identities=24% Similarity=0.373 Sum_probs=162.1
Q ss_pred cCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcH
Q 011962 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (474)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~ 225 (474)
+++..|.+|++|+|++||+++|++|+++++|+.++|||||+.|.+. .++|++|||++||+| ++|+++.+|+||||++|
T Consensus 34 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~-~~~gvvi~l~~l~~i-~~d~~~~~v~v~aG~~~ 111 (459)
T 2bvf_A 34 RHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT-NDGGIVLDLRLMNSI-HIDTAGSRARIGGGVIS 111 (459)
T ss_dssp TCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTC-CSSSEEEECTTCCCE-EEETTTTEEEEETTCBH
T ss_pred hccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccc-cCCeEEEECCCCCCE-EECCCCCEEEECCCCCH
Confidence 4557899999999999999999999999999999999999987764 357999999999999 59999999999999999
Q ss_pred HHHHHHHccCCCeeCCCCCCCceecccccccccCCCccccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhh
Q 011962 226 MELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLII 305 (474)
Q Consensus 226 ~~L~~~l~~~Gl~~~~~~~~~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~ 305 (474)
.+|+++|.++|+.++.+.++.++|||++.+|++|+++++||.++|+|++++||++||++++++.. .++||||+++
T Consensus 112 ~~l~~~l~~~Gl~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~-----~~~dLf~a~r 186 (459)
T 2bvf_A 112 GDLVKEAAKFGLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSDD-----ERPELFWAVR 186 (459)
T ss_dssp HHHHHHHHTTTEEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEESS-----SSHHHHHHHH
T ss_pred HHHHHHHHHcCCEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEEEcCCCeEEEeCCC-----CChhhHhHhh
Confidence 99999999999999988888899999999999999999999999999999999999999988543 4689999999
Q ss_pred ccCCCeeEEEEEEEEeEecCc
Q 011962 306 GSEGTLGIITEVTLRLQKIPQ 326 (474)
Q Consensus 306 Gs~G~lGIIt~~tlkl~p~p~ 326 (474)
|++|+|||||+++||++|.|+
T Consensus 187 g~~g~~GiVt~~~l~l~p~p~ 207 (459)
T 2bvf_A 187 GAGPNFGVVTEVEVQLYELPR 207 (459)
T ss_dssp HHGGGTCEEEEEEEEEEECCC
T ss_pred ccCCccEEEEEEEEEEEECCC
Confidence 999999999999999999964
No 11
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=2.2e-38 Score=330.81 Aligned_cols=297 Identities=19% Similarity=0.183 Sum_probs=238.7
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHH
Q 011962 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWME 227 (474)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~ 227 (474)
...|.+|++|+|++||+++|++| +|+.++|+|||+.+.+.+..+|++|||++||+|+++|+++.+|+||||++|.+
T Consensus 18 ~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~~~~v~v~aG~~l~~ 93 (422)
T 2vfr_A 18 TYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRVGGGVRYAE 93 (422)
T ss_dssp BCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETTTTEEEEETTCBHHH
T ss_pred cCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCCCCEEEEcCCCCHHH
Confidence 35899999999999999999999 89999999999988877435799999999999988999999999999999999
Q ss_pred HHHHHccCCCeeCCCCCC-CceecccccccccCCCccccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhhc
Q 011962 228 LNEYLEPYGLFFPLDPGP-GATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIG 306 (474)
Q Consensus 228 L~~~l~~~Gl~~~~~~~~-~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~G 306 (474)
|+++|.++|+.+|..++. .+||||++++|+||.. ..||.++|+|+++++|++||++++++.. ++ . |++++|
T Consensus 94 l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~--~~----~-f~~~~g 165 (422)
T 2vfr_A 94 LARVVHARGLALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARG--DE----R-FGGAVT 165 (422)
T ss_dssp HHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETT--ST----T-GGGTSS
T ss_pred HHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCC--CC----C-cceEEe
Confidence 999999999999865555 4799999999999985 6999999999999999999999998643 21 2 799999
Q ss_pred cCCCeeEEEEEEEEeEecCchhH-----------H-HHHH-----------HHHHH-hc------------CC--C----
Q 011962 307 SEGTLGIITEVTLRLQKIPQHSV-----------M-RKEA-----------LWACF-AM------------EP--S---- 344 (474)
Q Consensus 307 s~G~lGIIt~~tlkl~p~p~~~~-----------~-~~~~-----------~w~~~-~~------------~~--~---- 344 (474)
++|+|||||+++||+.|.|+... . +.-. +| .. .. .+ .
T Consensus 166 ~~G~lGvit~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
T 2vfr_A 166 SLGALGVVTSLTLDLEPAYEMEQHVFTELPLAGLDPATFETVMAAAYSVSLFT-DWRAPGFRQVWLKRRTDRPLDGFPYA 244 (422)
T ss_dssp CTTTTCEEEEEEEECEECCEEEEEEEEEECSTTCCHHHHHHHHTSSSEEEEEE-CSSSSSEEEEEEEEETTSCCCCCTTS
T ss_pred cCCCCEEEEEEEEEEEecCceEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEe-cCCCceeEEEEecCcCCCCCCCchHH
Confidence 99999999999999999987432 1 1100 01 00 00 00 0
Q ss_pred -------------------------------------------cccccccccccchhHHHHHHHHHHHhhcCCCeE----
Q 011962 345 -------------------------------------------FEAMISDVCVPLSCLAELISRSKKELDASPLIC---- 377 (474)
Q Consensus 345 -------------------------------------------~~~~~~d~~vp~~~l~~~~~~~~~~~~~~~l~~---- 377 (474)
...+..|++||+++++++++++.+++++ +...
T Consensus 245 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~avP~e~~~~~l~~l~~~~~~-~~~~~~~v 323 (422)
T 2vfr_A 245 APAAEKMHPVPGMPAVNCTEQFGVPGPWHERLPHFRAEFTPSSGAELQSEYLMPREHALAALHAMDAIRET-LAPVLQTC 323 (422)
T ss_dssp EECSSCCCSSTTSCGGGBCCCTTCCEEGGGTSSSBCTTCCCSCCSCEEEEEEEEGGGHHHHHHHHHHTHHH-HGGGEEEE
T ss_pred HHHHhhcccCcccChhhhcccCCccccHHHhcccccccccCCcccEEEEEEEEEHHHHHHHHHHHHHHHHh-CCCceeeE
Confidence 0111238899999999999999998887 4333
Q ss_pred -EEEeecCCCCeeE-------EEEeCCCChHHHHHHHHHHHHHHHHHHhcCCeee-ecCCCCcchHHHHHHhcCHHHHHH
Q 011962 378 -TVIAHAGDGNFHT-------VILFDPSKEEDRQEAERLNRFMVHTALSMEGTCT-GEHGIGTGKMKYLEKELGTGALET 448 (474)
Q Consensus 378 -~~~gh~~~g~~h~-------~~~~~~~~~~~~~~~~~l~~~i~~~~~~~gG~~s-~ehg~G~~~~~~l~~~~g~~~~~~ 448 (474)
..++|+.++.+|. ++-+..... .+..+++.+++.+.+.++||.++ ++ .+....+++.+.|+ .++.
T Consensus 324 ~~r~~~~~~~~Ls~~~~r~~~~l~~~~~~~--~~~~~~~~~~~~~lv~~~gG~~~wgk--~~~~~~~~~~~~Yp--~~~~ 397 (422)
T 2vfr_A 324 EIRTVAADAQWLSPAYGRDTVAAHFTWVED--TAAVLPVVRRLEEALVPFAARPHWGK--VFTVPAGELRALYP--RLAD 397 (422)
T ss_dssp EEEEECCBCSTTCTTBTSCEEEEEEEECSC--HHHHHHHHHHHHHHHGGGTCEECTTS--CCCCCHHHHHTTCT--THHH
T ss_pred EEEeecCCccccCCCCCCCeEEEEEecCCC--chhHHHHHHHHHHHHHHcCCcccccc--cCCCCHHHHHHHCc--CHHH
Confidence 5689998887765 333322221 34567889999999999999998 44 33456788899997 6999
Q ss_pred HHHHHHhcCCCCCCCC
Q 011962 449 MKRIKVALDPNNIMNP 464 (474)
Q Consensus 449 l~~iK~~~DP~gilNP 464 (474)
|+++|++|||+|+||.
T Consensus 398 f~~vk~~~DP~g~f~n 413 (422)
T 2vfr_A 398 FGALAGALDPAGKFTN 413 (422)
T ss_dssp HHHHHHHHCTTCTTCC
T ss_pred HHHHHHHhCCCCccCC
Confidence 9999999999999986
No 12
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=9.6e-37 Score=322.44 Aligned_cols=308 Identities=15% Similarity=0.245 Sum_probs=239.0
Q ss_pred CCcccCCCCCCEEEEcCCHHHHHHHHHHhhcC--CCcEEEEcCCCCCCCCCcCCCCcEEEEcCCCCCcEEeecCCCeEec
Q 011962 142 NSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKH--KVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVV 219 (474)
Q Consensus 142 ~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~--~~~v~~~GgG~s~~g~~~~~~~givIdl~~m~~i~~id~~~~~v~V 219 (474)
.+|.++.+.|.+|++|+|++||+++|++|+++ ++|++++|+|||+.+.+.. ++|++|||++||+|+++|.++.+|+|
T Consensus 34 ~~W~~~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~-~~gvvIdl~~l~~i~~~d~~~~~v~v 112 (481)
T 4feh_A 34 TGWGRTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQN-GGGLVIDMTPLNTIHSIDADTKLVDI 112 (481)
T ss_dssp CCTTCCSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCC-TTSEEEECTTCCCEEEEETTTTEEEE
T ss_pred ecccCCCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCC-cCeEEEECccCCCceEEcCCCCEEEE
Confidence 34445677899999999999999999999999 7999999999999776653 57999999999999889999999999
Q ss_pred CCCCcHHHHHHHHccCCCeeCCCCCC-CceecccccccccCCCccccccccceEEEEEEEecCCeEEEcccccccCcCCC
Q 011962 220 EPGIGWMELNEYLEPYGLFFPLDPGP-GATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGY 298 (474)
Q Consensus 220 ~aGv~~~~L~~~l~~~Gl~~~~~~~~-~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~ 298 (474)
|||++|.+|+++|.++|++++..++. .+||||++++|+||..+..||.++|+|+++++|++||++++++.. ..++
T Consensus 113 ~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~----~~~~ 188 (481)
T 4feh_A 113 DAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPT----GEDA 188 (481)
T ss_dssp ETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSS----STTH
T ss_pred cCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCC----CCCh
Confidence 99999999999999999999987776 589999999999999889999999999999999999999998543 1468
Q ss_pred chhhhhhccCCCeeEEEEEEEEeEecCchhH-------------------------------H-----------------
Q 011962 299 DLTRLIIGSEGTLGIITEVTLRLQKIPQHSV-------------------------------M----------------- 330 (474)
Q Consensus 299 dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~-------------------------------~----------------- 330 (474)
|||++++|++|++||||+++||++|.|+... .
T Consensus 189 dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~w~d~~~~~~~~~r~~~~~~ 268 (481)
T 4feh_A 189 ELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSDGSEARYTYSSAWFDAISAPPKLGRAAVSRG 268 (481)
T ss_dssp HHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSSSGGGGCSEEEEEECCSSCTTSTTCEEEEEE
T ss_pred HHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEEeccCCCCCCCeEEEEeC
Confidence 9999999999999999999999999875432 0
Q ss_pred ---HHHHHHH------------------------------H-------HhcCCC--------------------------
Q 011962 331 ---RKEALWA------------------------------C-------FAMEPS-------------------------- 344 (474)
Q Consensus 331 ---~~~~~w~------------------------------~-------~~~~~~-------------------------- 344 (474)
.....|. . ....+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~d~v~~~nr~yg 348 (481)
T 4feh_A 269 RLATVEQLPAKLRSEPLKFDAPQLLTLPDVFPNGLANKYTFGPIGELWYRKSGTYRGKVQNLTQFYHPLDMFGEWNRAYG 348 (481)
T ss_dssp EECCGGGSCGGGGGSTTCCC-----------------------------CCSCCEEEEEEEHHHHHC-------CHHHHT
T ss_pred CcCcccccccccccCccccccccccCCCccCcHHHHhHHHHHHHHHHHHhhCcccccccccceeeechhhhccccccccC
Confidence 0000000 0 000000
Q ss_pred -cccccccccccchhHHHHHHHHHHHhhcCCCe-----EEEEeecCCCCe-------eEEEEeCCCChHHHHHHHHHHHH
Q 011962 345 -FEAMISDVCVPLSCLAELISRSKKELDASPLI-----CTVIAHAGDGNF-------HTVILFDPSKEEDRQEAERLNRF 411 (474)
Q Consensus 345 -~~~~~~d~~vp~~~l~~~~~~~~~~~~~~~l~-----~~~~gh~~~g~~-------h~~~~~~~~~~~~~~~~~~l~~~ 411 (474)
......++++|.+ ..+.++++.+.+.+.+.. ...++...++-+ -+.+-+.... ...++.+.
T Consensus 349 ~~~f~q~e~~vP~~-~~~al~~l~~~i~~~~~~~~~~v~~R~~~~d~~~LS~~~~~~tlal~~~~~~-----~~~~~~~~ 422 (481)
T 4feh_A 349 PAGFLQYQFVIPTE-AVDEFKKIIGVIQASGHYSFLNVFKLFGPRNQAPLSFPIPGWNICVDFPIKD-----GLGKFVSE 422 (481)
T ss_dssp TTSEEEEEEEEETT-CHHHHHHHHHHHHHTTCCCSCCEEEEECCCCSCTTCCCCSEEEEEEEEECCT-----THHHHHHH
T ss_pred CCCcEEEEEEeccc-HHHHHHHHHHHHHhcCCCceEEEEEEEeCCCCccCCCCCCceEEEEEccCCc-----cHHHHHHH
Confidence 0012246789999 899999998888776421 123443322211 1111121111 35677888
Q ss_pred HHHHHHhcCCeeeecCCCCcchHHHHHHhcCHHHHHHHHHHHHhcCCCCCCC
Q 011962 412 MVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMN 463 (474)
Q Consensus 412 i~~~~~~~gG~~s~ehg~G~~~~~~l~~~~g~~~~~~l~~iK~~~DP~gilN 463 (474)
+.+.+.++||.++..+--.. ..+.+.+.|. .++.|+++|+++||+|+|.
T Consensus 423 le~i~~~~gGRphw~K~~~~-~~~~~~~~YP--~~~~F~~lr~~~DP~g~F~ 471 (481)
T 4feh_A 423 LDRRVLEFGGRLYTAKDSRT-TAETFHAMYP--RVDEWISVRRKVDPLRVFA 471 (481)
T ss_dssp HHHHHHHTTCEECGGGCSSC-CHHHHHHHCT--THHHHHHHHHHHCTTCCBC
T ss_pred HHHHHHHcCCEecchhccCC-CHHHHHHhCc--CHHHHHHHHHhhCCccccC
Confidence 88888999999997765554 5677888885 7999999999999999984
No 13
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2.2e-36 Score=320.53 Aligned_cols=173 Identities=27% Similarity=0.396 Sum_probs=160.1
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCC-CCcEEEEcCCCCCcEEeecCCCeEecCCCCcHH
Q 011962 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSP-NGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (474)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~-~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~ 226 (474)
...|++|++|+|++||+++|++|+++++||+++|||||+.|.++.. ++|++|||++||+| ++|+++.+|+||||++|.
T Consensus 43 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~V~aG~~l~ 121 (495)
T 3fw9_A 43 ISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAWVESGSTLG 121 (495)
T ss_dssp SCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEEEETTCBHH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEEEcCCCCHH
Confidence 3589999999999999999999999999999999999999888764 36899999999999 699999999999999999
Q ss_pred HHHHHHccC--CCeeCCCCCCCceecccccccccCCCccccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhh
Q 011962 227 ELNEYLEPY--GLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLI 304 (474)
Q Consensus 227 ~L~~~l~~~--Gl~~~~~~~~~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~ 304 (474)
+|+++|.++ |+.++.+.+..++|||++++|++|..+++||.++|+|++++||++||++++. . ..++||||++
T Consensus 122 ~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~~-~-----~~~~DLf~a~ 195 (495)
T 3fw9_A 122 ELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDR-Q-----AMGEDVFWAI 195 (495)
T ss_dssp HHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECH-H-----HHCHHHHHHH
T ss_pred HHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEEc-C-----CCChhhhhhh
Confidence 999999998 7888888888899999999999999999999999999999999999999961 1 2578999999
Q ss_pred hc-cCCCeeEEEEEEEEeEecCch
Q 011962 305 IG-SEGTLGIITEVTLRLQKIPQH 327 (474)
Q Consensus 305 ~G-s~G~lGIIt~~tlkl~p~p~~ 327 (474)
+| ++|+|||||+++|||+|.|+.
T Consensus 196 rGg~~g~~GIVt~~~l~l~p~p~~ 219 (495)
T 3fw9_A 196 RGGGGGVWGAIYAWKIKLLPVPEK 219 (495)
T ss_dssp TTSCTTSSCEEEEEEEECEECCSS
T ss_pred hcccCCCcEEEEEEEEEEEeCCCe
Confidence 98 789999999999999999874
No 14
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=5.4e-36 Score=316.57 Aligned_cols=195 Identities=23% Similarity=0.286 Sum_probs=172.2
Q ss_pred CcccChhhhhhhcC-CCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcC-CCCcEEEEcCC
Q 011962 126 DMTMDYEERYIHGK-PQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS-PNGGVCIDLSL 203 (474)
Q Consensus 126 ~v~~~~~~~~~~~~-~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~-~~~givIdl~~ 203 (474)
.+.++.+..|.... .++ .++++.|.+||+|+|++||+++|++|+++++||.++|||||+.|.+.. .+++|+|||++
T Consensus 13 ~v~~p~~~~y~~~~~~~n--~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~ 90 (473)
T 3rja_A 13 PIDIPGTADYERDVEPFN--IRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASFGFGGENGHLMVQLDR 90 (473)
T ss_dssp CBCCTTSHHHHHHTCCSB--TTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTCGGGTSSSSCEEEECTT
T ss_pred cEECCCCCchHHHHHHhh--cccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCCCcccCCCCeEEEECCC
Confidence 45666665554322 222 245679999999999999999999999999999999999999865543 35789999999
Q ss_pred CCCcEEeecCCCeEecCCCCcHHHHHHHHccCC-CeeCCCCCCCceecccccccccCCCccccccccceEEEEEEEecCC
Q 011962 204 MKSVKALHIEDMDVVVEPGIGWMELNEYLEPYG-LFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANG 282 (474)
Q Consensus 204 m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~G-l~~~~~~~~~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl~dG 282 (474)
||+|.++|+++.+|+||||++|.+|+++|.++| +.++.+.++.++|||++++|++|..+++||.++|+|++++||++||
T Consensus 91 ~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV~a~G 170 (473)
T 3rja_A 91 MIDVISYNDKTGIAHVEPGARLGHLATVLNDKYGRAISHGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVVLADG 170 (473)
T ss_dssp CCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTS
T ss_pred CCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEeccCCCCCcEeeeeccCCCCCcccccccchHhheeeEEEEecCC
Confidence 999988999999999999999999999999999 8888888888999999999999999999999999999999999999
Q ss_pred eEEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCch
Q 011962 283 DVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQH 327 (474)
Q Consensus 283 ~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~ 327 (474)
++++++.. .++||||+++|++|+|||||+++|||+|.|+.
T Consensus 171 ~v~~~~~~-----~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~ 210 (473)
T 3rja_A 171 RIVEASAT-----ENADLFWGIKGAGSNFGIVAVWKLATFPAPKV 210 (473)
T ss_dssp CEEEEETT-----BSHHHHHHHHHHGGGTCEEEEEEEECEECCSC
T ss_pred eEEEeCCC-----CCcchhhcccCCCCceEEEEEEEEEEEeCCCc
Confidence 99988543 57899999999999999999999999999863
No 15
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=2.7e-36 Score=322.49 Aligned_cols=180 Identities=23% Similarity=0.313 Sum_probs=160.3
Q ss_pred cCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcH
Q 011962 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (474)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~ 225 (474)
+.++.|.+||+|+|++||+++|++|+++++||.++||||++.|.+...++||+|||++||+| ++|+++.+|+||||++|
T Consensus 51 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~~gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~ 129 (521)
T 2ipi_A 51 RFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPAVRAVIDMSQMRQV-FYDSGKRAFAVEPGATL 129 (521)
T ss_dssp TCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTTCCEEEECTTCCCE-EEETTTTEEEECTTSBH
T ss_pred cccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCCCeEEEecccCCCe-EEeCCCCEEEEeCCcCH
Confidence 34568999999999999999999999999999999999999887665567999999999999 59999999999999999
Q ss_pred HHHHHHHc-cCCCeeCCCCCCCceecccccccccCCCccccccccceEEEEEEEecC--CeEEEcccccccCcCCCchhh
Q 011962 226 MELNEYLE-PYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLAN--GDVVKTASRARKSAAGYDLTR 302 (474)
Q Consensus 226 ~~L~~~l~-~~Gl~~~~~~~~~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl~d--G~i~~~~~~~~~~~~g~dl~~ 302 (474)
.+|+++|. ++|+.++.+.++.++|||++.+|++|+++++||.++|+|+++|||++| |+++.+.....+...++||||
T Consensus 130 ~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~ 209 (521)
T 2ipi_A 130 GETYRALYLDWGVTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWW 209 (521)
T ss_dssp HHHHHHHHHHHSBCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHH
T ss_pred HHHHHHHHHhcCceeCCCCCCCcccCCcccCCCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHH
Confidence 99999997 799999988888999999999999999999999999999999999977 997654332222334567999
Q ss_pred hhhcc-CCCeeEEEEEEEEe-----------EecCc
Q 011962 303 LIIGS-EGTLGIITEVTLRL-----------QKIPQ 326 (474)
Q Consensus 303 ~~~Gs-~G~lGIIt~~tlkl-----------~p~p~ 326 (474)
+++|+ +|+|||||+++||+ +|.|+
T Consensus 210 a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~ 245 (521)
T 2ipi_A 210 AHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAP 245 (521)
T ss_dssp HTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCC
T ss_pred HHhcCCCCceEEEEEEEEEeecccCCCcccccCCCC
Confidence 99985 79999999999999 88875
No 16
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=2.3e-36 Score=321.09 Aligned_cols=197 Identities=18% Similarity=0.246 Sum_probs=164.8
Q ss_pred hhcCCCcccChhhhhhhcCCCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCCCCcEEEE
Q 011962 121 AICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCID 200 (474)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~givId 200 (474)
..++..+.++.+..|..... .+..++...|.+||+|+|++||+++|++|+++++||+++||||++.|.+...++|++||
T Consensus 6 ~s~~~~~~~p~~~~y~~~~~-~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~gvvId 84 (501)
T 3pop_A 6 ASVPPFTVGREDPRYIELSH-SDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPRRDLVLD 84 (501)
T ss_dssp ---CCEEEETTSTTHHHHTC-CSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSCCSEEEE
T ss_pred ccCCCceECCCCcchHHHHH-HHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCCCEEEEE
Confidence 33445566665555543221 11224457899999999999999999999999999999999999998887666899999
Q ss_pred cCCCCCcEEeecCCCeEecCCCCcHHHHHHHHc-cCCCeeCCCCCCCceecccccccccCCCccccccccceEEEEEEEe
Q 011962 201 LSLMKSVKALHIEDMDVVVEPGIGWMELNEYLE-PYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVL 279 (474)
Q Consensus 201 l~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~-~~Gl~~~~~~~~~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl 279 (474)
|++||+| ++|+++.+|+||||++|.+|+++|. ++|+.++.+.++.++|||++++|++|..+++||.++|+|+++|||+
T Consensus 85 l~~l~~i-~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~evV~ 163 (501)
T 3pop_A 85 LHNLHAI-GPAADGAGVRVGSGATVDQVQKALFRRWNAALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVAV 163 (501)
T ss_dssp CTTCCCE-EECTTSSSEEEETTCBHHHHHHHHHHHHSBCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEEEEE
T ss_pred ecccCCe-EEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEEEEEE
Confidence 9999998 4999999999999999999999996 5799999888888999999999999999999999999999999999
Q ss_pred --cCCe--EEEcccccccCcCCCchhhhhhcc-CCCeeEEEEEEEEe
Q 011962 280 --ANGD--VVKTASRARKSAAGYDLTRLIIGS-EGTLGIITEVTLRL 321 (474)
Q Consensus 280 --~dG~--i~~~~~~~~~~~~g~dl~~~~~Gs-~G~lGIIt~~tlkl 321 (474)
+||+ ++++..+ ....++||||+++|+ +|+|||||+++||+
T Consensus 164 ~da~G~~~~v~~~~~--~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~ 208 (501)
T 3pop_A 164 VDESRTVRLVTARAD--DTGDLGELFWAHTGGGGGNFGVVTAYEFRS 208 (501)
T ss_dssp ECTTSCEEEEEEETT--CCHHHHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred ecCCCCEEEEEeccC--CCCCCccHHHHhhccCCCCcEEEEEEEEEe
Confidence 8999 4544211 112568999999998 79999999999998
No 17
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=3e-36 Score=320.48 Aligned_cols=173 Identities=26% Similarity=0.403 Sum_probs=157.7
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcC-CCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHH
Q 011962 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS-PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (474)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~-~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~ 226 (474)
...|.+||+|+|++||+++|++|+++++||+++||||++.|.+.. ..+||+|||++||+| ++|+++.+|+||||++|.
T Consensus 51 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~l~ 129 (518)
T 3vte_A 51 TPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAWVEAGATLG 129 (518)
T ss_dssp SCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEEEETTCBHH
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEEEeCCccHH
Confidence 358999999999999999999999999999999999999887753 357999999999999 599999999999999999
Q ss_pred HHHHHHccC--CCeeCCCCCCCceecccccccccCCCccccccccceEEEEEEEecCCeEEEcccccccCcCCCchhhhh
Q 011962 227 ELNEYLEPY--GLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLI 304 (474)
Q Consensus 227 ~L~~~l~~~--Gl~~~~~~~~~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~ 304 (474)
+|+++|.++ |+.++.+.++.++|||++++|++|..+++||.++|+|++++||++||++++. . ..++||||++
T Consensus 130 ~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~-~-----~~~~DLf~a~ 203 (518)
T 3vte_A 130 EVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDR-K-----SMGEDLFWAI 203 (518)
T ss_dssp HHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECH-H-----HHCHHHHHHH
T ss_pred HHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEe-e-----ccccchhhhe
Confidence 999999886 5677877778899999999999999999999999999999999999999953 1 1467999999
Q ss_pred hcc-CCCeeEEEEEEEEeEecCch
Q 011962 305 IGS-EGTLGIITEVTLRLQKIPQH 327 (474)
Q Consensus 305 ~Gs-~G~lGIIt~~tlkl~p~p~~ 327 (474)
+|+ +|+|||||+++|||+|.|+.
T Consensus 204 rGgg~g~fGIVt~~~l~l~p~p~~ 227 (518)
T 3vte_A 204 RGGGGENFGIIAAWKIKLVAVPSK 227 (518)
T ss_dssp TTSCGGGTCEEEEEEEECEECCSC
T ss_pred ecccCCCceEEEEEEEEEEeCCCe
Confidence 998 89999999999999999874
No 18
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=3.7e-35 Score=313.74 Aligned_cols=179 Identities=23% Similarity=0.321 Sum_probs=159.5
Q ss_pred CCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHH
Q 011962 147 AVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (474)
Q Consensus 147 ~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~ 226 (474)
++..|.+||+|+|++||+++|++|+++++||.++||||++.|.+...++||+|||++||+| ++|+++.+|+||||++|.
T Consensus 54 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~~m~~i-~~d~~~~~v~v~aG~~~~ 132 (523)
T 2wdx_A 54 FNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEI-AYDPSMNAFLIEPGNTLS 132 (523)
T ss_dssp CCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSSTTCCEEEECTTCCCE-EEETTTTEEEECTTCBHH
T ss_pred ccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCCCCeEEEEcccCCCE-EEcCCCCEEEEcCCCCHH
Confidence 3568999999999999999999999999999999999999887766567999999999999 699999999999999999
Q ss_pred HHHHHHc-cCCCeeCCCCCCCceecccccccccCCCccccccccceEEEEEEEecC--CeEEEcccccccCcCCCchhhh
Q 011962 227 ELNEYLE-PYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLAN--GDVVKTASRARKSAAGYDLTRL 303 (474)
Q Consensus 227 ~L~~~l~-~~Gl~~~~~~~~~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl~d--G~i~~~~~~~~~~~~g~dl~~~ 303 (474)
+|+++|. ++|+.++.+.+..++|||++++|++|+++++||.++|+|++++||++| |+++.+.....+.+.++||||+
T Consensus 133 ~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a 212 (523)
T 2wdx_A 133 EVYEKLYLGWNVTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWA 212 (523)
T ss_dssp HHHHHHHHHHSCCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHH
T ss_pred HHHHHHHHhcCeEEccCCCCCCeeCccccCCCCCcccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHH
Confidence 9999998 499999988778899999999999999999999999999999999955 9986553222223355679999
Q ss_pred hhcc-CCCeeEEEEEEEEe-----------EecCc
Q 011962 304 IIGS-EGTLGIITEVTLRL-----------QKIPQ 326 (474)
Q Consensus 304 ~~Gs-~G~lGIIt~~tlkl-----------~p~p~ 326 (474)
++|+ +|+|||||+++||+ +|.|+
T Consensus 213 ~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~ 247 (523)
T 2wdx_A 213 HTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPP 247 (523)
T ss_dssp TTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCC
T ss_pred hhccCCCCcEEEEEEEEEeecccCCCcccccCCCc
Confidence 9975 69999999999999 88875
No 19
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=6.7e-35 Score=312.11 Aligned_cols=175 Identities=22% Similarity=0.285 Sum_probs=153.7
Q ss_pred cCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcH
Q 011962 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (474)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~ 225 (474)
+++..|.+||+|+|++||+++|++|+++++||+++||||++.|.+...++||+|||++||+| ++|+++.+|+||||++|
T Consensus 54 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~ 132 (530)
T 2y3s_A 54 RFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSAV-GFDEERGAFAVEAGATL 132 (530)
T ss_dssp TCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTTCCEEEECTTCCCE-EEETTTTEEEEETTCBH
T ss_pred hccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCCCeEEEEcccCCCE-EEcCCCCEEEEeCCCCH
Confidence 44678999999999999999999999999999999999999887765567999999999999 59999999999999999
Q ss_pred HHHHHHHcc-CCCeeCCCCCCCceecccccccccCCCccccccccceEEEEEEEe--cCCeEEEcccccccCcCCCchhh
Q 011962 226 MELNEYLEP-YGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVL--ANGDVVKTASRARKSAAGYDLTR 302 (474)
Q Consensus 226 ~~L~~~l~~-~Gl~~~~~~~~~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl--~dG~i~~~~~~~~~~~~g~dl~~ 302 (474)
.+|+++|.+ +|+.++.+.+..++|||++++|++|+++++||.++|+|++++||+ ++|+++.+.........++||||
T Consensus 133 ~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~ 212 (530)
T 2y3s_A 133 GAVYKTLFRVWGVTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNHDLWW 212 (530)
T ss_dssp HHHHHHHHHHHSCCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHH
T ss_pred HHHHHHHHhhcCeEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEEEecCCCcEEEEeccccccCCChHHHH
Confidence 999999985 899988877778999999999999999999999999999999999 55998544211100112245999
Q ss_pred hhhcc-CCCeeEEEEEEEEe
Q 011962 303 LIIGS-EGTLGIITEVTLRL 321 (474)
Q Consensus 303 ~~~Gs-~G~lGIIt~~tlkl 321 (474)
+++|+ +|+|||||+++||+
T Consensus 213 a~rG~g~g~fGIVt~~~l~l 232 (530)
T 2y3s_A 213 AHTGGGGGNFGVVVRYWLRT 232 (530)
T ss_dssp HTTTSCTTSSCEEEEEEECC
T ss_pred HHhcCCCCCcEEEEEEEEEe
Confidence 99987 69999999999999
No 20
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=100.00 E-value=5.3e-36 Score=300.87 Aligned_cols=286 Identities=15% Similarity=0.176 Sum_probs=220.2
Q ss_pred CCHHHHHHHHhhcCC-CcccChhhhhhhcCCCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCC
Q 011962 111 IPQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH 189 (474)
Q Consensus 111 ~~~~~~~~L~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~ 189 (474)
|+++++++|++++++ ++..+ .+...| ++ +++++.|++|++|+|++||++++++|+++++|+.++|+|||+.+.
T Consensus 20 ~~~~~~~~L~~~lg~~~v~~~-~~l~~~----tt-~~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~ 93 (322)
T 3tx1_A 20 FQSNAMNNLQTKFPHIAIKLN-EPLSKY----TY-TKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIK 93 (322)
T ss_dssp -----CCCHHHHCTTSEEEEE-EEGGGG----ST-TSCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEEC
T ss_pred cCHHHHHHHHHhcCCcceEcC-cchHHh----cc-CCcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcC
Confidence 456677889999986 46665 333333 33 478889999999999999999999999999999999999998543
Q ss_pred CcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHHHHHccCCCe-eCCCCCCCceecccccccccCCCcccc-cc
Q 011962 190 TLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRY-GT 267 (474)
Q Consensus 190 ~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~-~~~~~~~~~tvGG~i~~~~~G~~s~~y-G~ 267 (474)
... .+|++|||++|++|. +| +.+|+|+||++|.+|++++.++|+. +++.+++++||||++++|++| | |.
T Consensus 94 ~~~-~~gvvI~l~~~~~I~-~d--~~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGg-----yGg~ 164 (322)
T 3tx1_A 94 DGG-IRGVILHLDLLQTIE-RN--NTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGA-----YGGE 164 (322)
T ss_dssp TTC-EEEEEEECTTCCCEE-EE--TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TTEE
T ss_pred CCC-CCeEEEECCCCCcEE-EC--CCEEEEecCcCHHHHHHHHHHcCCcccccCCCCcchhHHHHHhCccC-----cccc
Confidence 321 258999999999986 54 5699999999999999999999997 777778889999999999654 6 68
Q ss_pred ccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCchhHHHHHHHHHHHhcCCCccc
Q 011962 268 MRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVMRKEALWACFAMEPSFEA 347 (474)
Q Consensus 268 ~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~~w~~~~~~~~~~~ 347 (474)
++|+|+++++|++||++++++.. ..+|++...+.|++ .||||+++|||.|.|+..+.+........+..+++..
T Consensus 165 ~~d~v~~vevV~~~G~i~~~~~~----~~~~~yR~s~~g~~--~~IIt~~tl~L~p~~~~~i~~~~~~~~~~R~~kqP~~ 238 (322)
T 3tx1_A 165 ISDVLEAATVLTQTGELKKLKRS----ELKAAYRFSTIAEK--NYIVLDATFSLALEEKNLIQAKMDELTAAREAKQPLE 238 (322)
T ss_dssp HHHHEEEEEEECTTSCEEEEEGG----GCC--CC-CTTTGG--GCEEEEEEEECEECCHHHHHHHHHHHHHHHHHHSCCS
T ss_pred hHhhEEEEEEEcCCCCEEEechH----HcCcchhhcccCCC--CEEEEEEEEEEEeCCHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999988543 23444444444444 4899999999999987655322222222222234455
Q ss_pred ccccccccchhHHHHHHHHHHHhhcCCCeEEEEeecCCCCeeEEEEeCCCChHHHHHHHHHHHHHHHHHHhcCC
Q 011962 348 MISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEG 421 (474)
Q Consensus 348 ~~~d~~vp~~~l~~~~~~~~~~~~~~~l~~~~~gh~~~g~~h~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~gG 421 (474)
+....+++.++... .+.++|++.|+++..+|.++.+..|++|++|.+.++. +++.+|++.+.+.|.+..|
T Consensus 239 ~~saGS~FknP~g~---~Ag~LIe~~GlkG~~~G~a~vs~kha~fivN~g~Ata-~dv~~L~~~v~~~V~~~fg 308 (322)
T 3tx1_A 239 YPSCGSVFKRPPGH---FAGKLIQDSGLQGHIIGGAQVSLKHAGFIVNIGGATA-TDYMNLIAYVQQTVREKFD 308 (322)
T ss_dssp SCBCSCCBCCCTTS---CHHHHHHHTTCTTCEETTEEECSSCTTCEEECSSCCH-HHHHHHHHHHHHHHHHHHC
T ss_pred CCceeEEEECCCCc---hHHHHHHHcCCCCceeCCeEEEcCCCCEEEECCCCCH-HHHHHHHHHHHHHHHHHHC
Confidence 66777777766432 3557999999999999999999999999999887665 7889999999999988654
No 21
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=6.6e-34 Score=302.99 Aligned_cols=202 Identities=19% Similarity=0.252 Sum_probs=171.4
Q ss_pred HHHHhhcC---CCcccChhhhhhhcCCCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcC-
Q 011962 117 DELKAICQ---DDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS- 192 (474)
Q Consensus 117 ~~L~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~- 192 (474)
++|++.++ ..+..+.+..|......++ .++++.|.+||+|+|++||+++|++|+++++||+++|||||+.+.+.+
T Consensus 7 ~~l~~~l~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~ 85 (503)
T 1zr6_A 7 NSINACLAAADVEFHEEDSEGWDMDGTAFN-LRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGG 85 (503)
T ss_dssp CHHHHHHHHTTCEECCTTSHHHHHHTSCSB-GGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTTTS
T ss_pred HHHHHhhCcCCceecCCCccchHHHhhhhh-hcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccC
Confidence 44555554 1344454555543221111 245679999999999999999999999999999999999999876654
Q ss_pred CCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHHHHHccC-CCeeCCCCCCCceecccccccccCCCccccccccce
Q 011962 193 PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPY-GLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDN 271 (474)
Q Consensus 193 ~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~-Gl~~~~~~~~~~tvGG~i~~~~~G~~s~~yG~~~d~ 271 (474)
.++|++|||++||+| ++| ++.+|+||||++|.+|+++|.++ |+.+|.+.++.++|||.+.+|++|+++++||.++|+
T Consensus 86 ~~~gvvIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l~~~l~~~~gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~ 163 (503)
T 1zr6_A 86 EDGHLMLELDRMYRV-SVD-DNNVATIQGGARLGYTALELLDQGNRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDW 163 (503)
T ss_dssp SSSCEEEECTTCCCE-EEC-TTSCEEEETTCBHHHHHHHHHHTTSEECCCCSCTTSBHHHHHHHCCCSTTHHHHCCGGGG
T ss_pred CCCcEEEECccCCCE-EEC-CCCeEEEecCCCHHHHHHHHHHcCCEEeCCCCCCcCchhhhhcCCCCCcccccccChhhe
Confidence 457999999999999 699 88899999999999999999555 588998888889999999999999999999999999
Q ss_pred EEEEEEEecCCeEEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCc
Q 011962 272 VINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQ 326 (474)
Q Consensus 272 V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~ 326 (474)
|++++||++||++++++.. .++||||+++|++|+|||||+++||++|.|+
T Consensus 164 v~~~~vV~a~G~i~~~~~~-----~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~ 213 (503)
T 1zr6_A 164 LIGATVVLADASIVHVSET-----ENADLFWALRGGGGGFAIVSEFEFNTFEAPE 213 (503)
T ss_dssp EEEEEEECTTSCEEEEBTT-----BSHHHHHHHTTCCSSSCEEEEEEECCEECCS
T ss_pred EEEEEEEecCCCEEEeCCC-----CCccHHHHHhccCCCcEEEEEEEEEEEecCc
Confidence 9999999999999987543 5689999999999999999999999999986
No 22
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=100.00 E-value=6.8e-34 Score=286.83 Aligned_cols=288 Identities=16% Similarity=0.174 Sum_probs=209.9
Q ss_pred CCCCHHHHHHHHhhcCC-CcccChhhhhhhcCCCCCcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCC
Q 011962 109 KEIPQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE 187 (474)
Q Consensus 109 ~~~~~~~~~~L~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~ 187 (474)
..++.+++++|+++++. +|.+ ..++..| +++ ++++.|++|++|+|++||++++++|+++++|++++|||||+.
T Consensus 12 ~~~~~~~~~~l~~~l~~~~v~~-~~~l~~~----~t~-~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~ 85 (326)
T 1hsk_A 12 DPINKDIYQALQQLIPNEKIKV-DEPLKRY----TYT-KTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNII 85 (326)
T ss_dssp ---CHHHHHHHHHHSCGGGEEE-EEEGGGT----CTT-SCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEE
T ss_pred CcchHHHHHHHHHhcCccceec-CcchHHh----ccC-CcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccc
Confidence 35678899999999985 5666 3344333 222 566789999999999999999999999999999999999987
Q ss_pred CCCcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHHHHHccCCCe-eCCCCCCCceecccccccccCCCccccc
Q 011962 188 GHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYG 266 (474)
Q Consensus 188 g~~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~-~~~~~~~~~tvGG~i~~~~~G~~s~~yG 266 (474)
+...+. +|++|||++||+| ++| +.+++||||++|.+|++++.++|+. ++..++.++||||++++|++| ||
T Consensus 86 ~~~~~~-~gvvI~l~~m~~i-~id--~~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~PgtvGG~i~~nagg-----yG 156 (326)
T 1hsk_A 86 IREGGI-RGIVISLLSLDHI-EVS--DDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGA-----YG 156 (326)
T ss_dssp ECTTCE-EEEEEECTTCCCE-EEE--TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TT
T ss_pred cCCCCC-CeEEEEeCCCCce-EEc--CCEEEEeCCCcHHHHHHHHHHCCCccccccCCCcchhhHHHhccccc-----Cc
Confidence 665433 5899999999999 576 4799999999999999999999994 555555667999999999655 88
Q ss_pred -cccceEEEEEEEecCCeEEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEec-CchhHHHHHHHHHHHhcCCC
Q 011962 267 -TMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKI-PQHSVMRKEALWACFAMEPS 344 (474)
Q Consensus 267 -~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~-p~~~~~~~~~~w~~~~~~~~ 344 (474)
.++|+|+++++|++||++++++.. +..+||++..++ ++| ||||+++||++|. |+... .....+...+...+
T Consensus 157 ~~~~d~v~~v~vv~~~G~i~~~~~~--~~~~gyr~~~l~--s~g--gIIt~~~l~l~p~~p~~~~-~~~~~~~~~~~a~~ 229 (326)
T 1hsk_A 157 GEVKDCIDYALCVNEQGSLIKLTTK--ELELDYRNSIIQ--KEH--LVVLEAAFTLAPGKMTEIQ-AKMDDLTERRESKQ 229 (326)
T ss_dssp EEHHHHEEEEEEECTTSCEEEEETT--TTTCBTTBCHHH--HTT--CEEEEEEEECEECCHHHHH-HHHHHHHHHHHHHS
T ss_pred hhhhhhEEEEEEEeCCCCEEEEChH--HcCCCccccccC--CCC--EEEEEEEEEEEcCCHHHHH-HHHHHHHHHHHhcC
Confidence 899999999999999999988654 566888887664 456 9999999999999 54332 11111211111111
Q ss_pred cccccccccccchhHHHHHHHHHHHhhcCCCeEEEEeecCCCCeeEEEEeCCCChHHHHHHHHHHHHHHHHHHhcCCe
Q 011962 345 FEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGT 422 (474)
Q Consensus 345 ~~~~~~d~~vp~~~l~~~~~~~~~~~~~~~l~~~~~gh~~~g~~h~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~gG~ 422 (474)
+..+....++..+... ..+.+++++.++++..+|.++....|+++++|.+.+.. +++.++++.+.+.+.+.+|.
T Consensus 230 p~~~~s~gs~fk~p~~---~~a~elid~~glkg~~~g~a~v~~~~a~~lvn~~ga~~-~~v~~~~~~v~~~v~~~~gi 303 (326)
T 1hsk_A 230 PLEYPSCGSVFQRPPG---HFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTA-TDYENLIHYVQKTVKEKFGI 303 (326)
T ss_dssp CTTSCEECCCBCCCTT---SCHHHHHHHTTCTTCEETTEEECSSCTTCEEECSSCCH-HHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCcEEEeeeCCCc---chHHHHHHHhccCCEEeCCeeecccccEEEEECCCCCH-HHHHHHHHHHHHHHHHhhCC
Confidence 1111122222222111 11335677787777777766666778888888765333 56788888888888887764
No 23
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=100.00 E-value=1.4e-32 Score=278.91 Aligned_cols=265 Identities=14% Similarity=0.101 Sum_probs=211.1
Q ss_pred cccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCCCCcEEEEcCCCCCcEEeec--CCCeEecCC
Q 011962 144 FHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHI--EDMDVVVEP 221 (474)
Q Consensus 144 ~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~givIdl~~m~~i~~id~--~~~~v~V~a 221 (474)
++++++.|+++++|+|++||++++++|+++++|+.++|+|||+.+... .+|++|+++ |++|. ++. ++.+|+|+|
T Consensus 24 t~~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~--~~GvVI~l~-~~~i~-v~~~~~~~~v~v~A 99 (357)
T 3i99_A 24 TFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH--YTGMIVVNR-LNGIE-HQQDDDYHRLHVAG 99 (357)
T ss_dssp TTCCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC--EEEEEEEEC-CCCEE-EEECSSEEEEEEET
T ss_pred cCCCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC--CCeEEEEcC-CCceE-EeccCCceEEEEeC
Confidence 448899999999999999999999999999999999999999854432 258999998 99986 543 456899999
Q ss_pred CCcHHHHHHHHccCCCe-eCCCCCCCceecccccccccCCCcccccc-ccceEEEEEEEec-CCeEEEcccccccCcCCC
Q 011962 222 GIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYGT-MRDNVINLKVVLA-NGDVVKTASRARKSAAGY 298 (474)
Q Consensus 222 Gv~~~~L~~~l~~~Gl~-~~~~~~~~~tvGG~i~~~~~G~~s~~yG~-~~d~V~~~~vVl~-dG~i~~~~~~~~~~~~g~ 298 (474)
|+.|.+|.+++.++||. ++...++++||||++.|| ++.||. ++|+|+++++|++ ||++++.... +..++|
T Consensus 100 G~~~~~l~~~a~~~Gl~GlE~l~gIPGtVGGav~~N-----aGaYG~e~~d~v~~vevv~~~~G~i~~~~~~--dl~f~Y 172 (357)
T 3i99_A 100 GEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQN-----IGAYGVEFKDVCDYVEYLCLETGTVKRLTME--ECQFGY 172 (357)
T ss_dssp TSBHHHHHHHHHHTTCTTCGGGTTCCSBGGGTTTTT-----CEETTEEGGGTEEEEEEEETTTTEEEEEETG--GGCCBT
T ss_pred CCcHHHHHHHHHHcCCcCccccCCCCchhHHHHHhc-----hhhhhhhHHhhEeEEEEEECCCCcEEEEeHH--HcCccc
Confidence 99999999999999998 888899999999999999 778997 9999999999999 9999988644 445666
Q ss_pred chhhhhhccCCCeeEEEEEEEEeEecCchhH----H-----------HHHHHHHHHh-cCCCcccccccccccchhH---
Q 011962 299 DLTRLIIGSEGTLGIITEVTLRLQKIPQHSV----M-----------RKEALWACFA-MEPSFEAMISDVCVPLSCL--- 359 (474)
Q Consensus 299 dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~----~-----------~~~~~w~~~~-~~~~~~~~~~d~~vp~~~l--- 359 (474)
+... +.+++|++||||+++|||.|.+...+ + ..+.+...+. ..|++..+....+++.+..
T Consensus 173 R~s~-~~~~~g~~gIIt~v~f~L~p~~~~~~~y~~l~~~l~~~~~~~~~~~v~~~R~~k~p~P~~~~saGS~FkNP~~~~ 251 (357)
T 3i99_A 173 RDSI-FKHQLYQKAVVTAVGLKFAKAWQPIIQYGPLKDLSSDCAIHDVYQRVCATRMEKLPDPAVMGNAGSFFKNPVISQ 251 (357)
T ss_dssp TBCG-GGTTTTTTEEEEEEEEEEESSCCCCCCSGGGGGSCTTCCHHHHHHHHHHHHHHHSCCTTTSCEEEESBCCCEECH
T ss_pred cccc-CCCccCCCEEEEEEEEEEEeCCccccchHHHHhhhccCCHHHHHHHHHHHHhcCCCCCCCCCccceeeeCCCccH
Confidence 6532 44456789999999999999864211 0 1122222222 2344555666666665543
Q ss_pred ---HHHHH----------------HHHHHhhcCCCeEEEEeecCCCCeeEEEEeCCCChHHHHHHHHHHHHHHHHHHhcC
Q 011962 360 ---AELIS----------------RSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSME 420 (474)
Q Consensus 360 ---~~~~~----------------~~~~~~~~~~l~~~~~gh~~~g~~h~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~g 420 (474)
..+.. .+..+|++.|+++..+|.++.+..|++|++|.+.++. +++.+|++.+.+.|.+..
T Consensus 252 ~~~~~l~~~~~~~p~y~~~~g~k~~Ag~LIe~aGlKG~~~G~A~vs~kha~flvN~g~Ata-~Di~~L~~~v~~~V~~~f 330 (357)
T 3i99_A 252 QAFARLQIEHPDVVAYPAEQGVKVAAGWLIDQAGLKGHQIGGAKVHPKQALVIVNTGDASA-QDVLMLAADIQQRVFNCY 330 (357)
T ss_dssp HHHHHHHHHCTTCCEECCSSSEEECHHHHHHHTTCTTCEETTEEECTTSTTEEEECSSCCH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcCCCCcccccCCceeeHHHHHHHcCCCCCeeCCEEEcccCCCEEEECCCCCH-HHHHHHHHHHHHHHHHHH
Confidence 11111 2456999999999999999999999999999987665 789999999999998875
Q ss_pred C
Q 011962 421 G 421 (474)
Q Consensus 421 G 421 (474)
|
T Consensus 331 g 331 (357)
T 3i99_A 331 G 331 (357)
T ss_dssp S
T ss_pred C
Confidence 5
No 24
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.98 E-value=4.4e-31 Score=279.99 Aligned_cols=171 Identities=24% Similarity=0.300 Sum_probs=148.1
Q ss_pred CCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCC-----CCCcCCCCcEEEEcC-CCCCcEEeecC--CCeEe
Q 011962 147 AVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE-----GHTLSPNGGVCIDLS-LMKSVKALHIE--DMDVV 218 (474)
Q Consensus 147 ~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~-----g~~~~~~~givIdl~-~m~~i~~id~~--~~~v~ 218 (474)
+++.|.+|++|+|++||+++|++|+++++||+++|+|||+. ++. +.++||+|||+ +||+| ++|.+ ..+|+
T Consensus 26 ~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~-~~~~GVvIdls~~Ln~I-~vD~~~~~~tVt 103 (540)
T 3js8_A 26 IKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGV-SCPAVVLLDTTRYLTAM-SIDASGPVAKVT 103 (540)
T ss_dssp CEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTC-SSCSEEEEETTTTCCCE-EEECSSSSEEEE
T ss_pred cCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCC-CCCCeEEEECcCcCCCE-EECCCCCccEEE
Confidence 45689999999999999999999999999999999999985 443 34578999995 79999 69875 57999
Q ss_pred cCCCCcHHHHHHHHccCCCeeCCCCCCC-ceecccccccccCCC----------ccccccccceEEEEEEEecCCe----
Q 011962 219 VEPGIGWMELNEYLEPYGLFFPLDPGPG-ATIGGMCATRCSGSL----------AVRYGTMRDNVINLKVVLANGD---- 283 (474)
Q Consensus 219 V~aGv~~~~L~~~l~~~Gl~~~~~~~~~-~tvGG~i~~~~~G~~----------s~~yG~~~d~V~~~~vVl~dG~---- 283 (474)
||||+++.+|+++|.++|+.++..++++ +||||++++|+||.. +.+||.++|+|++++||++||+
T Consensus 104 V~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG~~~~~ 183 (540)
T 3js8_A 104 AQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDKASGAY 183 (540)
T ss_dssp EETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEETTTTEE
T ss_pred EccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCCCCcee
Confidence 9999999999999999999999877764 999999999999985 5799999999999999999998
Q ss_pred -EEEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCch
Q 011962 284 -VVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQH 327 (474)
Q Consensus 284 -i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~ 327 (474)
++++. + .++||+++..| .|+ ||||++|||++|.+..
T Consensus 184 ~i~~~s-~-----~~~DL~a~r~G-~G~-gIVTevtlrl~P~~~l 220 (540)
T 3js8_A 184 ALRKFA-R-----NDPQIAPLLAH-VGR-SLIVEATLQAAPNQRL 220 (540)
T ss_dssp EEEEEE-T-----TSGGGHHHHTC-TTS-SCEEEEEEEEEECCEE
T ss_pred eEEEeC-C-----CChhHHHHHhc-CCC-eEEEEEEEEEEECCce
Confidence 66553 2 36798666554 477 6999999999998643
No 25
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.98 E-value=1.2e-31 Score=271.02 Aligned_cols=267 Identities=15% Similarity=0.099 Sum_probs=211.3
Q ss_pred CcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCCCCcEEEEcCCCCCcEEeecCC-CeEecCC
Q 011962 143 SFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIED-MDVVVEP 221 (474)
Q Consensus 143 ~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~givIdl~~m~~i~~id~~~-~~v~V~a 221 (474)
+++++++.|+++++|+|++||++++++|+++++|+.++|+|||+.+..- .+|++|+++ |++|..++.++ .+++|+|
T Consensus 7 tt~~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~--~~GvVI~l~-~~~i~~i~~~~~~~v~vgA 83 (340)
T 1uxy_A 7 NTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED--YRGTVIINR-IKGIEIHDEPDAWYLHVGA 83 (340)
T ss_dssp STTCCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC--EEEEEEEEC-CCCEEEEECSSEEEEEEET
T ss_pred ccCCCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC--CCeEEEEcc-CCCcEEEecCCCeEEEEec
Confidence 3448889999999999999999999999999999999999999854432 258999996 99998777776 6899999
Q ss_pred CCcHHHHHHHHccCCCe-eCCCCCCCceecccccccccCCCcccccc-ccceEEEEEEEec-CCeEEEcccccccCcCCC
Q 011962 222 GIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYGT-MRDNVINLKVVLA-NGDVVKTASRARKSAAGY 298 (474)
Q Consensus 222 Gv~~~~L~~~l~~~Gl~-~~~~~~~~~tvGG~i~~~~~G~~s~~yG~-~~d~V~~~~vVl~-dG~i~~~~~~~~~~~~g~ 298 (474)
|++|.+|.+++.++||. ++...++++||||++.|| ++.||. ++|+|.++++|++ +|+++++... +..++|
T Consensus 84 G~~~~~l~~~~~~~Gl~Gle~~~gIPGtVGGa~~~N-----aGayG~ei~d~v~~v~vv~~~~G~v~~~~~~--d~~~gY 156 (340)
T 1uxy_A 84 GENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQN-----IGAYGVELQRVCAYVDSVELATGKQVRLTAK--ECRFGY 156 (340)
T ss_dssp TSBHHHHHHHHHHTTCCSCGGGTTCCSBGGGTTTTT-----CEETTEEGGGTEEEEEEEETTTTEEEEEETG--GGTCBT
T ss_pred CCCHHHHHHHHHHCCCCccccccCCccchhHHHHhc-----cccchhhHHhheeEEEEEECCCCcEEEEeHH--Hhcccc
Confidence 99999999999999997 888888999999999999 667996 9999999999997 9999988653 455777
Q ss_pred chhhhhhccCCCeeEEEEEEEEeEecCchh----------------HHHHHHHHHHHh-cCCCcccccccccccchhH--
Q 011962 299 DLTRLIIGSEGTLGIITEVTLRLQKIPQHS----------------VMRKEALWACFA-MEPSFEAMISDVCVPLSCL-- 359 (474)
Q Consensus 299 dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~----------------~~~~~~~w~~~~-~~~~~~~~~~d~~vp~~~l-- 359 (474)
+.. .+.++++++||||+++||+.|.+... ....+.+...+. ..|.+..+....+++.+..
T Consensus 157 R~s-~~~~~~~~~gIVt~v~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~k~Pdp~~~~saGS~FkNP~v~ 235 (340)
T 1uxy_A 157 RDS-IFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGAFFKNPVVS 235 (340)
T ss_dssp TBC-GGGTTTTTTEEEEEEEEEEESSCCCCCCSGGGGGSCTTTCCHHHHHHHHHHHHHHHSCCTTTSCEEEESBCCCEEC
T ss_pred CcC-ccCCcCCCCEEEEEEEEEEEcCCCccCCHHHHhhhccccccHHHHHHHHHHHHHhcCCCccCCceEEEEEeCCCcc
Confidence 764 44455668999999999999985211 011222333322 2233334455555555542
Q ss_pred ----HHHHH-----------------HHHHHhhcCCCeEEEEeecCCCCeeEEEEeCCCChHHHHHHHHHHHHHHHHHHh
Q 011962 360 ----AELIS-----------------RSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALS 418 (474)
Q Consensus 360 ----~~~~~-----------------~~~~~~~~~~l~~~~~gh~~~g~~h~~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 418 (474)
.++.+ .+..+|++.|+++..+|.++.+..|++|++|.+.++. +++.+|++.+.+.|.+
T Consensus 236 ~~~~~~l~~~~p~~~~y~~~~g~~k~~Ag~LIe~~GlKG~~~G~a~vs~kha~flvN~g~Ata-~dv~~L~~~v~~~V~~ 314 (340)
T 1uxy_A 236 AETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKS-EDVVQLAHHVRQKVGE 314 (340)
T ss_dssp HHHHHHHHHHSTTCCEEECTTSCEEECHHHHHHHTTCTTCEETTEEECSSCTTEEEECSSCCH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCcccCCCCCeeecHHHHHHHcCCCCCeeCCEEEccccCCeEEECCCCCH-HHHHHHHHHHHHHHHH
Confidence 11110 1457899999999999999999999999999887665 7899999999999988
Q ss_pred cCC
Q 011962 419 MEG 421 (474)
Q Consensus 419 ~gG 421 (474)
..|
T Consensus 315 ~fg 317 (340)
T 1uxy_A 315 KFN 317 (340)
T ss_dssp HHS
T ss_pred HHC
Confidence 765
No 26
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.97 E-value=5e-30 Score=276.22 Aligned_cols=173 Identities=19% Similarity=0.282 Sum_probs=151.7
Q ss_pred cCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCC----CCcEEEEc-CCCCCcEEeec--CCCeEe
Q 011962 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSP----NGGVCIDL-SLMKSVKALHI--EDMDVV 218 (474)
Q Consensus 146 ~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~----~~givIdl-~~m~~i~~id~--~~~~v~ 218 (474)
++...|.+|+.|+|++||+++|++|+++++||+++|+|||+.+.++.. .+|++||| ++||+| ++|+ ++.+|+
T Consensus 31 ~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~~~~~~~v~ 109 (561)
T 2i0k_A 31 EIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNTGGPVATVT 109 (561)
T ss_dssp SSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEECCSSSCEEE
T ss_pred ccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecCcCCccEEE
Confidence 344689999999999999999999999999999999999986644432 35799999 899999 7998 788999
Q ss_pred cCCCCcHHHHHHHHccCCCeeCCCCCCC-ceecccccccccCCC----------ccccccccceEEEEEEEecCCe---E
Q 011962 219 VEPGIGWMELNEYLEPYGLFFPLDPGPG-ATIGGMCATRCSGSL----------AVRYGTMRDNVINLKVVLANGD---V 284 (474)
Q Consensus 219 V~aGv~~~~L~~~l~~~Gl~~~~~~~~~-~tvGG~i~~~~~G~~----------s~~yG~~~d~V~~~~vVl~dG~---i 284 (474)
||||++|.+|+++|.++|+.+++.++++ +||||++++|+||.. +.+||.++|+|+++++|++||+ +
T Consensus 110 v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~~d~V~~~evV~~dG~~~~~ 189 (561)
T 2i0k_A 110 AGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVVWNGTTYAL 189 (561)
T ss_dssp EETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEEECSSSEEE
T ss_pred EcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCcccccccccccHhheEEEEEEEeCCCCEEEe
Confidence 9999999999999999999999988875 999999999999986 7789999999999999999999 6
Q ss_pred EEcccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCch
Q 011962 285 VKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQH 327 (474)
Q Consensus 285 ~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~ 327 (474)
+++.. ...||+++++|. |. ||||++|||+.|.++.
T Consensus 190 ~~~~~------~~~dl~~a~~g~-G~-giIt~~tl~l~p~~~~ 224 (561)
T 2i0k_A 190 ETYQR------NDPRITPLLTNL-GR-CFLTSVTMQAGPNFRQ 224 (561)
T ss_dssp EEEET------TSGGGHHHHSCT-TS-SCEEEEEEECEECCEE
T ss_pred eeccC------CCccHHHHHhcC-CC-EEEEEEEEEEEECCce
Confidence 65532 235898888843 55 8999999999998864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.96 E-value=3.4e-30 Score=252.05 Aligned_cols=241 Identities=15% Similarity=0.114 Sum_probs=192.5
Q ss_pred CCCcccCCCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCCcCCCCcEEEEcCCCCCcEEeecCCCeEecC
Q 011962 141 QNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVE 220 (474)
Q Consensus 141 ~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~givIdl~~m~~i~~id~~~~~v~V~ 220 (474)
+++ ++++++|+ +++|+|++||++++ ++|+.++|+|||+.+...+.++|++|++++|++|. +| + +|+
T Consensus 14 ~tt-~~igg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I~-vd--~---~v~ 79 (268)
T 2gqt_A 14 YTT-LGVGGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYD-LK--G---WVG 79 (268)
T ss_dssp GSS-SCCCCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCSSEEEEECGGGGCBC-TT--S---EEE
T ss_pred hcc-cccCcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcCCeEEEEcCCCCCcE-Ec--C---EEE
Confidence 344 48888889 99999999999999 89999999999986555444459999999999986 54 2 999
Q ss_pred CCCcHHHHHHHHccCCCe-eCCCCCCCceecccccccccCCCccccc-cccceEEEEEEEecCCeEEEcccccccCcCCC
Q 011962 221 PGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYG-TMRDNVINLKVVLANGDVVKTASRARKSAAGY 298 (474)
Q Consensus 221 aGv~~~~L~~~l~~~Gl~-~~~~~~~~~tvGG~i~~~~~G~~s~~yG-~~~d~V~~~~vVl~dG~i~~~~~~~~~~~~g~ 298 (474)
||++|.+|.+++.++||. ++...++++||||++.|| ++.|| .++|+|+++++| +||++++++.. +..++|
T Consensus 80 aG~~~~~l~~~~~~~Gl~Gle~~~giPGtvGGav~~N-----aGayG~e~~d~v~~v~vv-~~G~v~~~~~~--~l~~~Y 151 (268)
T 2gqt_A 80 AGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMN-----AGTRFGEMADALEAVEVF-HDGAFHVYCPE--ELGFGY 151 (268)
T ss_dssp TTSBHHHHHHHHHHTTEESCGGGTTCCCBHHHHHHTT-----CEETTEEGGGGEEEEEEE-ETTEEEEECGG--GSCCBT
T ss_pred CCCCHHHHHHHHHHcCCcCCccccCccchhHHHHHhc-----cccCchhHHhheeEEEEE-CCCcEEEEchH--Hccccc
Confidence 999999999999999998 888888889999999999 66899 599999999999 99999988653 445666
Q ss_pred chhhhhhccCCCeeEEEEEEEEeEecCchhHHHH-HHHHHHHhcCCCcccccccccccchhHHHHHHHHHHHhhcCCCeE
Q 011962 299 DLTRLIIGSEGTLGIITEVTLRLQKIPQHSVMRK-EALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLIC 377 (474)
Q Consensus 299 dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~-~~~w~~~~~~~~~~~~~~d~~vp~~~l~~~~~~~~~~~~~~~l~~ 377 (474)
+... +.+ + ||||+++|||+|.+...+.+. +.+...+.. ++ .+....+++.++... .+.++|++.|+++
T Consensus 152 R~s~-~~~-~---gIVt~~~~~L~~~~~~~i~~~~~~v~~~R~~--~P-~~~saGS~FknP~g~---~Ag~LIe~~GlkG 220 (268)
T 2gqt_A 152 RKSH-LPP-G---GIVTRVRLKLKERPKEEILRRMAEVDRARKG--QP-KRKSAGCAFKNPPGQ---SAGRLIDERGLKG 220 (268)
T ss_dssp TBCC-CST-T---CEEEEEEECCEECCHHHHHHHHHHHHHHTTT--SC-SSCSSSCCBCCCTTC---CHHHHHHHTTCTT
T ss_pred CCCC-cCC-C---ceEEEEEEEEEeCCHHHHHHHHHHHHHHHHh--CC-CCcceEEEEECCCCc---hHHHHHHHcCCCC
Confidence 6542 221 2 399999999999875444222 223333322 44 667777777776322 2557999999999
Q ss_pred EEEeecCCCCeeEEEEeCCCChHHHHHHHHHHHHHHHH
Q 011962 378 TVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHT 415 (474)
Q Consensus 378 ~~~gh~~~g~~h~~~~~~~~~~~~~~~~~~l~~~i~~~ 415 (474)
..+|.++.+..|++|++|.+.++. +++.+|++.+.+.
T Consensus 221 ~~~G~a~vs~kha~fivN~g~ata-~dv~~L~~~v~~~ 257 (268)
T 2gqt_A 221 LRVGDAMISLEHGNFIVNLGQARA-KDVLELVRRVQEE 257 (268)
T ss_dssp CEETTEEECSSCTTCEEECSSCCH-HHHHHHHHHHHHH
T ss_pred CccCCeEECcccCCeEEECCCCCH-HHHHHHHHHHHHH
Confidence 999999999999999999887665 7788899988776
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.85 E-value=1.4e-21 Score=185.74 Aligned_cols=116 Identities=29% Similarity=0.406 Sum_probs=105.7
Q ss_pred EeecCCCeEecCCCCcHHHHHHHHccCCCeeCCCCC-CCceecccccccccCCCccccccccceEEEEEEEecCCeEEEc
Q 011962 209 ALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG-PGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKT 287 (474)
Q Consensus 209 ~id~~~~~v~V~aGv~~~~L~~~l~~~Gl~~~~~~~-~~~tvGG~i~~~~~G~~s~~yG~~~d~V~~~~vVl~dG~i~~~ 287 (474)
++|+++.+|+||||+++.+|+++|.++|+.++..|+ .+.||||++++|++| .+||.. |+|++++||++||+++++
T Consensus 2 ~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~~~ 77 (219)
T 2yvs_A 2 EVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRVRA 77 (219)
T ss_dssp EEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTTHHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEEEE
T ss_pred eEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCCchhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEEEE
Confidence 488999999999999999999999999999888776 345999999999988 799999 999999999999999998
Q ss_pred ccccccCcCCCchhhhhhccCCCeeEEEEEEEEeEecCchh
Q 011962 288 ASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHS 328 (474)
Q Consensus 288 ~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~ 328 (474)
+....++..|||++++++|++|+|||||+++||++|.|+..
T Consensus 78 ~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~ 118 (219)
T 2yvs_A 78 GGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQA 118 (219)
T ss_dssp ECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEE
T ss_pred CCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCccc
Confidence 76555667899999999999999999999999999998753
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.42 E-value=1.2e-07 Score=93.28 Aligned_cols=153 Identities=18% Similarity=0.083 Sum_probs=97.2
Q ss_pred CCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCC--CcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHH
Q 011962 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (474)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~--~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L 228 (474)
+-.+++|+|.+|+.++++.. +.+..+.||||++.-. .-....+++||++++..+..|..+++.+++++|+++.+|
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~~~~l~iGA~~tl~~l 81 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVENDL 81 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHHH
T ss_pred cceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHHH
Confidence 44689999999999999863 3578999999996210 000124799999854333233346667999999999999
Q ss_pred HHH-HccCCCe-----eCCCCCC----CceecccccccccCCCccccccccceEE-------EEEEEecCCeEEEccccc
Q 011962 229 NEY-LEPYGLF-----FPLDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI-------NLKVVLANGDVVKTASRA 291 (474)
Q Consensus 229 ~~~-l~~~Gl~-----~~~~~~~----~~tvGG~i~~~~~G~~s~~yG~~~d~V~-------~~~vVl~dG~i~~~~~~~ 291 (474)
.+. +.+.++. +....++ .+||||++.+|.. ..|.+. .++++.++| ..+....
T Consensus 82 ~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r~i~~~- 150 (287)
T 1ffv_C 82 ISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RRTVPAD- 150 (287)
T ss_dssp HHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EEEEEST-
T ss_pred hhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eEEEEHH-
Confidence 963 3333332 2223344 4999999999842 344444 588899999 3444222
Q ss_pred ccCcCCCchhhhhhccCCCeeEEEEEEEEeEe
Q 011962 292 RKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323 (474)
Q Consensus 292 ~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p 323 (474)
+-..+|.-..+- .| .|||+++|.+.+
T Consensus 151 -df~~g~~~t~l~---~~--eii~~i~ip~~~ 176 (287)
T 1ffv_C 151 -GFFLGTYMTLLE---EN--EVMVEIRVPAFA 176 (287)
T ss_dssp -TTEEETTEESCC---TT--CEEEEEEEECCC
T ss_pred -HHhcCcccccCC---CC--CEEEEEEecCCC
Confidence 111233321111 12 599999998754
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.89 E-value=2.9e-06 Score=88.75 Aligned_cols=153 Identities=15% Similarity=0.101 Sum_probs=97.1
Q ss_pred CCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCC--CcCCCCcEEEEcCC---CCCcEEeecCCCeEecCCCC
Q 011962 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSL---MKSVKALHIEDMDVVVEPGI 223 (474)
Q Consensus 149 ~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~--~~~~~~givIdl~~---m~~i~~id~~~~~v~V~aGv 223 (474)
+....+++|+|.+|+.++++... +..+.+|||++.-. .-....+++||+++ |+.|. .++..++++|++
T Consensus 175 G~a~~y~~P~sl~ea~~ll~~~~----~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~---~~~~~l~IGA~v 247 (462)
T 2w3s_A 175 GQTAPAFLPETSDALADWYLAHP----EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIR---ETPDGYGIGAGV 247 (462)
T ss_dssp ----CCBCCSSHHHHHHHHHHCT----TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEE---EETTEEEEETTC
T ss_pred CCccEEEecCCHHHHHHHHhhCC----CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEE---EcCCEEEEccCC
Confidence 44456789999999999987642 46778999997311 00112378999988 45654 356679999999
Q ss_pred cHHHHHHHHccCCCe-e----CCCCCCC----ceecccccccccCCCccccccccceEE----EEEEEecCCeEEEcccc
Q 011962 224 GWMELNEYLEPYGLF-F----PLDPGPG----ATIGGMCATRCSGSLAVRYGTMRDNVI----NLKVVLANGDVVKTASR 290 (474)
Q Consensus 224 ~~~~L~~~l~~~Gl~-~----~~~~~~~----~tvGG~i~~~~~G~~s~~yG~~~d~V~----~~~vVl~dG~i~~~~~~ 290 (474)
++.+|.+.+.+ .+. + ....++. +||||++.++.+ .+.+...++ .+++..++|+ .+....
T Consensus 248 tl~~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~vp~~ 319 (462)
T 2w3s_A 248 TIAALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RRMPLE 319 (462)
T ss_dssp BHHHHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CCCBGG
T ss_pred cHHHHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EEEEHH
Confidence 99999988543 443 3 4444444 999999999852 355666666 7888888883 323222
Q ss_pred cccCcCCCchhhhhhccCCCeeEEEEEEEEeEe
Q 011962 291 ARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323 (474)
Q Consensus 291 ~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p 323 (474)
+-..||.-..+ ..| -||++++|...+
T Consensus 320 --dF~~g~~~t~L---~~~--Eii~~i~iP~~~ 345 (462)
T 2w3s_A 320 --DFFLEYRKQDR---RPG--EFVESVTLPKSA 345 (462)
T ss_dssp --GGEEETTEESC---CTT--CEEEEEEEESCC
T ss_pred --HhhcccccccC---CCC--cEEEEEEEecCC
Confidence 11122221111 012 599999987543
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.49 E-value=3.9e-05 Score=75.40 Aligned_cols=152 Identities=18% Similarity=0.145 Sum_probs=92.9
Q ss_pred CCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCC-CcC-CCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHH
Q 011962 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH-TLS-PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (474)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~-~~~-~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L 228 (474)
+-.+++|+|.+|+.++++.. +-+..+.+|||++.-. ... ...+++||++++..+..|..+++.++++|++++.+|
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~l 81 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHAL 81 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHHH
T ss_pred ceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHHH
Confidence 44689999999999998643 3457889999996210 000 133799999875444334456778999999999999
Q ss_pred HH--HHccCCCe-eC----CCCCC----CceecccccccccCCCccccccccceEE-------EEEEEecCCeEEEcccc
Q 011962 229 NE--YLEPYGLF-FP----LDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI-------NLKVVLANGDVVKTASR 290 (474)
Q Consensus 229 ~~--~l~~~Gl~-~~----~~~~~----~~tvGG~i~~~~~G~~s~~yG~~~d~V~-------~~~vVl~dG~i~~~~~~ 290 (474)
.+ .+.++ +. +. ...++ .+||||++.++. ..+|.+. .+++..++|+ .+..-.
T Consensus 82 ~~~~~~~~~-~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v~~~ 150 (288)
T 1n62_C 82 IGSDFLAAK-LPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIVAAR 150 (288)
T ss_dssp HHCHHHHHH-CHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEEEHH
T ss_pred hcChHHHHH-HHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEEEHH
Confidence 95 45432 21 22 12222 489999999882 2455544 5677788884 333222
Q ss_pred cccCcCCCchhhhhhccCCCeeEEEEEEEEeEe
Q 011962 291 ARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323 (474)
Q Consensus 291 ~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p 323 (474)
+-..||.-..+ ..--|||++.|...+
T Consensus 151 --df~~g~~~t~l-----~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 151 --DYYQGAYFTAI-----EPGELLTAIRIPVPP 176 (288)
T ss_dssp --HHEEETTEESC-----CTTCEEEEEEEECCC
T ss_pred --HHhcCcccccC-----CCCCEEEEEEeCCCC
Confidence 00011110001 112689999987543
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=97.42 E-value=0.00012 Score=72.54 Aligned_cols=126 Identities=12% Similarity=0.047 Sum_probs=82.8
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCC--cCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcH
Q 011962 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT--LSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (474)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~--~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~ 225 (474)
++.+..+++|+|.+|+.++++... ...+.+|||++.-.- -......+||++++..+..|..+++.++++|++++
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~~~----~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQHP----EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACAL 82 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHHCT----TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBH
T ss_pred cCCCeEEEccCCHHHHHHHHHhCC----CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCcH
Confidence 356778999999999999886531 246789999972100 00123689999976544445556778999999999
Q ss_pred HHHHHHHccC-------------CCe--eCCCCCC----CceecccccccccCCCccccccccceEE----EEEEEecCC
Q 011962 226 MELNEYLEPY-------------GLF--FPLDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI----NLKVVLANG 282 (474)
Q Consensus 226 ~~L~~~l~~~-------------Gl~--~~~~~~~----~~tvGG~i~~~~~G~~s~~yG~~~d~V~----~~~vVl~dG 282 (474)
.+|.+.+.++ .|. +....++ .+||||+++++.. .+.+.-.++ .+++..++|
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~l~~~~G 156 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLTIVSRGT 156 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEEEEETTE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEEEEcCCC
Confidence 9999886532 111 2222232 5999999998742 222222222 467777888
Q ss_pred e
Q 011962 283 D 283 (474)
Q Consensus 283 ~ 283 (474)
+
T Consensus 157 ~ 157 (305)
T 3nvz_B 157 R 157 (305)
T ss_dssp E
T ss_pred c
Confidence 4
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.69 E-value=0.0017 Score=63.69 Aligned_cols=120 Identities=13% Similarity=0.009 Sum_probs=77.7
Q ss_pred CCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCC--cCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHH
Q 011962 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT--LSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (474)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~--~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L 228 (474)
+--+++|+|.+|+.++++. + -...+.+|||++.-.- -......+||++++..+..|..+++.+++++++++.+|
T Consensus 5 ~f~y~~P~sl~ea~~ll~~---~-~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l 80 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLAD---D-PDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFRN 80 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH---C-TTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHHH
T ss_pred CceEECCCCHHHHHHHHhh---C-CCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHHH
Confidence 4468999999999999874 1 2356789999952100 00123689999986544444456778999999999999
Q ss_pred HH--HHccCC--Ce--eCCCCCC----CceecccccccccCCCccccccccceEE-------EEEEEecCCe
Q 011962 229 NE--YLEPYG--LF--FPLDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI-------NLKVVLANGD 283 (474)
Q Consensus 229 ~~--~l~~~G--l~--~~~~~~~----~~tvGG~i~~~~~G~~s~~yG~~~d~V~-------~~~vVl~dG~ 283 (474)
.+ .+.++- |. +....++ -+||||++.+.. ..+|... .+++..++|+
T Consensus 81 ~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~ 143 (288)
T 1t3q_C 81 KTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGV 143 (288)
T ss_dssp HHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEE
T ss_pred hcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCce
Confidence 86 443321 11 1111121 489999998652 1455554 6677778885
No 34
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=93.85 E-value=0.052 Score=57.17 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=27.3
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCCCCCCCee
Q 011962 435 KYLEKELGTGALETMKRIKVALDPNNIMNPGKLI 468 (474)
Q Consensus 435 ~~l~~~~g~~~~~~l~~iK~~~DP~gilNPGk~~ 468 (474)
+|....|| +++++|++||++|||+|+|+--.-|
T Consensus 444 ~~~~~~yG-~n~~RL~~iK~kyDP~~vF~~~~~i 476 (503)
T 1zr6_A 444 EAQKLYWR-GNLEKLQAIKAKYDPEDVFGNVVSV 476 (503)
T ss_dssp HHHHHHHG-GGHHHHHHHHHHHCTTCTTCCTTSC
T ss_pred hHHHHHHH-hHHHHHHHHHHHhCchhhcCCCCCC
Confidence 67778899 4899999999999999999644333
No 35
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=93.58 E-value=0.092 Score=51.39 Aligned_cols=104 Identities=17% Similarity=0.232 Sum_probs=67.1
Q ss_pred CCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCC-c-CCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHH
Q 011962 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT-L-SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (474)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~-~-~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L 228 (474)
+--+++|+|.+|+.++++...+ ....+.+|||++.-.- . ......+||++++..+..|..+++.++++|++++.+|
T Consensus 3 ~f~y~~P~sl~ea~~ll~~~~~--~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l 80 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQYKD--VPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQI 80 (296)
T ss_dssp CCEEECCSSHHHHHHHHHHTTT--SCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHHHH
T ss_pred ceeEeCCCCHHHHHHHHHhCCC--CCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHHHH
Confidence 3468999999999988754321 1356789999962100 0 0123689999987655555567789999999999999
Q ss_pred HHH--HccC--CCe--eCCCCCC----Cceeccccccc
Q 011962 229 NEY--LEPY--GLF--FPLDPGP----GATIGGMCATR 256 (474)
Q Consensus 229 ~~~--l~~~--Gl~--~~~~~~~----~~tvGG~i~~~ 256 (474)
.+. +.++ .|. +....++ -+||||++.+.
T Consensus 81 ~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a 118 (296)
T 3hrd_C 81 ENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTS 118 (296)
T ss_dssp HHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHT
T ss_pred HhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccC
Confidence 752 2211 011 1111222 48999999865
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=90.41 E-value=0.41 Score=47.34 Aligned_cols=100 Identities=16% Similarity=0.191 Sum_probs=64.1
Q ss_pred CCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCC--CcCCCCcEEEEcCCCCCcEEeecC-CCeEecCCCCcHHH
Q 011962 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSLMKSVKALHIE-DMDVVVEPGIGWME 227 (474)
Q Consensus 151 P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~--~~~~~~givIdl~~m~~i~~id~~-~~~v~V~aGv~~~~ 227 (474)
|--+++|+|.+|..++++. . .-.+.+|||++.-. .-......+||++++..+..|..+ ++.++++|++++.+
T Consensus 6 ~f~y~~P~sl~ea~~ll~~---~--~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~~ 80 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALAA---E--ATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEA 80 (324)
T ss_dssp CCEEECCSSHHHHHHHTTS---T--TEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHH
T ss_pred ceEEEccCCHHHHHHHHhC---C--CCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCCCeEEEccCCcHHH
Confidence 3458899999999998862 2 46778999986210 000123789999987555445444 34799999999999
Q ss_pred HHHH--HccC-C-Ce--eCCCCCC----Cceecccccc
Q 011962 228 LNEY--LEPY-G-LF--FPLDPGP----GATIGGMCAT 255 (474)
Q Consensus 228 L~~~--l~~~-G-l~--~~~~~~~----~~tvGG~i~~ 255 (474)
|.+. +.++ . |. +....++ -+||||++.+
T Consensus 81 l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~~ 118 (324)
T 1rm6_B 81 IAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQ 118 (324)
T ss_dssp HHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTC
T ss_pred HHhChHHHHHHHHHHHHHHHhCCHHHcceeEeeeeccc
Confidence 9874 2211 0 10 1111111 3899999974
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=79.53 E-value=1.9 Score=50.49 Aligned_cols=105 Identities=12% Similarity=0.041 Sum_probs=69.6
Q ss_pred CCCCEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCCC-c-CCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHH
Q 011962 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT-L-SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (474)
Q Consensus 149 ~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~-~-~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~ 226 (474)
+.+..+++|+|.+|+.++++... .-.+.+|||++.-.- . ...-..+||++++..+..|..++..++++|++++.
T Consensus 231 ~~~~~~~~P~sl~ea~~ll~~~~----~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~ 306 (1332)
T 3unc_A 231 GERVTWIQASTLKELLDLKAQHP----EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALS 306 (1332)
T ss_dssp CSSCEEEECCSHHHHHHHHHHCT----TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHH
T ss_pred CCceEEEccCCHHHHHHHHhhCC----CCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHH
Confidence 34567999999999999876531 235678999862100 0 01236899999866554455667789999999999
Q ss_pred HHHHHHccC-------------CCe--eCCCCCC----Cceecccccccc
Q 011962 227 ELNEYLEPY-------------GLF--FPLDPGP----GATIGGMCATRC 257 (474)
Q Consensus 227 ~L~~~l~~~-------------Gl~--~~~~~~~----~~tvGG~i~~~~ 257 (474)
+|.+.+.+. .|. +....++ -+||||++++..
T Consensus 307 ~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~as 356 (1332)
T 3unc_A 307 SVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITAS 356 (1332)
T ss_dssp HHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCC
T ss_pred HHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccC
Confidence 999876432 011 1111121 389999998874
No 38
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=37.70 E-value=13 Score=43.63 Aligned_cols=101 Identities=13% Similarity=0.145 Sum_probs=65.1
Q ss_pred CEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCCCCCC--CcCCCCcEEEEcCCCCCcEEeecCCCeEecCCCCcHHHHH
Q 011962 152 DIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELN 229 (474)
Q Consensus 152 ~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~--~~~~~~givIdl~~m~~i~~id~~~~~v~V~aGv~~~~L~ 229 (474)
...++|.|.+|+.++...-- +.+ ...|+|.+.=. .-...-.++||+.+...+..|..++..++++|+|++.++.
T Consensus 241 ~~w~~P~tl~el~~l~~~~p--~a~--lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMKHP--SAP--LVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp CEEEECSSHHHHHHHHHHCT--TSC--BCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred ceEecCCCHHHHHHHHHHCC--CCe--EEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 46789999999999865432 223 34577764100 0001235899988766655566778889999999999999
Q ss_pred HHHccC----CC----e-------eCCCCCC----Cceeccccccc
Q 011962 230 EYLEPY----GL----F-------FPLDPGP----GATIGGMCATR 256 (474)
Q Consensus 230 ~~l~~~----Gl----~-------~~~~~~~----~~tvGG~i~~~ 256 (474)
+.|.+. +- . +..-.+. -+||||+|++.
T Consensus 317 ~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~a 362 (1335)
T 3zyv_A 317 NVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISR 362 (1335)
T ss_dssp HHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTC
T ss_pred HHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceecc
Confidence 888531 10 0 1111121 39999999876
No 39
>1aie_A P53; oligomer, DNA; 1.50A {Homo sapiens} SCOP: a.53.1.1 PDB: 2j0z_A 1c26_A 1pes_A 1pet_A 2j10_A 1hs5_A 2j11_A
Probab=30.82 E-value=21 Score=22.35 Aligned_cols=19 Identities=21% Similarity=0.389 Sum_probs=15.6
Q ss_pred HhcCHHHHHHHHHHHHhcC
Q 011962 439 KELGTGALETMKRIKVALD 457 (474)
Q Consensus 439 ~~~g~~~~~~l~~iK~~~D 457 (474)
...|.++|+.|++||+.++
T Consensus 6 ~VrGRe~yEml~ki~d~LE 24 (31)
T 1aie_A 6 QIRGRERFEMFRELNEALE 24 (31)
T ss_dssp CCCSHHHHHHHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHHHHH
Confidence 3468899999999998875
No 40
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=29.72 E-value=60 Score=26.78 Aligned_cols=36 Identities=25% Similarity=0.243 Sum_probs=30.5
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHhhcCCCcEE-EEcCC
Q 011962 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPII-PYGGA 183 (474)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~-~~GgG 183 (474)
.+.|..|+...+++|+.++.+.|.+.|+|.. ++=.|
T Consensus 52 ~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG 88 (120)
T 1xty_A 52 QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAG 88 (120)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 4688999999999999999999999999964 34444
No 41
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=28.27 E-value=65 Score=26.80 Aligned_cols=36 Identities=8% Similarity=0.002 Sum_probs=30.4
Q ss_pred CCCCEEEEcCCHHHHHHHHHHhhcCCCcEE-EEcCCC
Q 011962 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPII-PYGGAT 184 (474)
Q Consensus 149 ~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~-~~GgG~ 184 (474)
+.+..|+...+++|+.++.+.|++.|+|.. ++-.|.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~ 83 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGL 83 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 578999999999999999999999999964 444444
No 42
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=28.18 E-value=66 Score=26.59 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=30.6
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHhhcCCCcEE-EEcCCC
Q 011962 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPII-PYGGAT 184 (474)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~-~~GgG~ 184 (474)
.+.|..|+...+++|+.++.+.|.+.|+|.. ++=.|+
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 4688999999999999999999999999964 333433
No 43
>2vda_B Maltoporin; sugar transport, protein transport, protein targeting, transmembrane, outer membrane, signal peptide; NMR {Escherichia coli}
Probab=26.36 E-value=23 Score=20.82 Aligned_cols=18 Identities=44% Similarity=0.669 Sum_probs=14.7
Q ss_pred chhhHHHHHhhccccccc
Q 011962 58 SLLPLALAASAGSLAMQS 75 (474)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~ 75 (474)
|-||+++|+++|-.+.|.
T Consensus 9 rklplavav~agv~~aqa 26 (28)
T 2vda_B 9 RKLPLAVAVAAGVMSAQA 26 (28)
T ss_dssp CCCTHHHHHHHHTTCCCC
T ss_pred ccCchHHHHHHHHhHhhh
Confidence 369999999999877664
No 44
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=24.64 E-value=65 Score=26.32 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=28.0
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHhhcCCCcEE
Q 011962 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPII 178 (474)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~ 178 (474)
.+.|..|+...+++|+.++.+.|.+.|+|..
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~ 77 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCS 77 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEE
Confidence 4688999999999999999999999999864
No 45
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=24.58 E-value=65 Score=26.41 Aligned_cols=37 Identities=16% Similarity=0.073 Sum_probs=30.6
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHhhcCCCcEE-EEcCCC
Q 011962 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPII-PYGGAT 184 (474)
Q Consensus 148 ~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~-~~GgG~ 184 (474)
.+.|..|+...+++|+.++.+.|.+.|+|.. ++-.|+
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~ 86 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGY 86 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4688999999999999999999999999964 344433
No 46
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.46 E-value=95 Score=23.80 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=29.1
Q ss_pred CEEEEcCCHHHHHHHHHHhhcCCCcEEEEcCCCC
Q 011962 152 DIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATS 185 (474)
Q Consensus 152 ~~Vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s 185 (474)
.++-..++.+|+.+|++--+.+|.|+++.-.|.+
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 3566788999999999999999999998876655
No 47
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=21.75 E-value=1e+02 Score=25.15 Aligned_cols=30 Identities=10% Similarity=0.238 Sum_probs=27.3
Q ss_pred CCCCEEEEcCCHHHHHHHHHHhhcCCCcEE
Q 011962 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPII 178 (474)
Q Consensus 149 ~~P~~Vv~P~s~eeV~~iv~~a~~~~~~v~ 178 (474)
+.|..|+...+++|+.++.+.|.+.|+|..
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~ 79 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVS 79 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEE
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEE
Confidence 568999999999999999999999999853
No 48
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=21.16 E-value=49 Score=32.85 Aligned_cols=22 Identities=18% Similarity=0.305 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHhhcCCCcEEE
Q 011962 158 RSEDEVSKIVKCCDKHKVPIIP 179 (474)
Q Consensus 158 ~s~eeV~~iv~~a~~~~~~v~~ 179 (474)
-|.+|+++||++|++++|.|+|
T Consensus 92 YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHHHHHHHHcCCEEEE
Confidence 5889999999999999999987
No 49
>3zy0_A Tumor protein P63; transcription, transcription factor, tetramerization domain, cycle control; HET: MSE; 1.90A {Homo sapiens}
Probab=20.55 E-value=42 Score=21.13 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=15.7
Q ss_pred HhcCHHHHHHHHHHHHhcC
Q 011962 439 KELGTGALETMKRIKVALD 457 (474)
Q Consensus 439 ~~~g~~~~~~l~~iK~~~D 457 (474)
...|.++|+.|++||+.++
T Consensus 9 ~VrGRe~ye~l~ki~e~LE 27 (32)
T 3zy0_A 9 PVRGRETYEMLLKIKESLE 27 (32)
T ss_dssp EESSHHHHHHHHHHHHHHH
T ss_pred EEechhhHHHHHHHHHHHH
Confidence 4468899999999998864
Done!