Query 011963
Match_columns 474
No_of_seqs 357 out of 1737
Neff 7.7
Searched_HMMs 13730
Date Mon Mar 25 18:53:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011963.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011963hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j0sa1 c.37.1.19 (A:22-243) P 100.0 6.5E-47 4.7E-51 358.6 18.7 194 182-390 24-221 (222)
2 d1veca_ c.37.1.19 (A:) DEAD bo 100.0 3.3E-45 2.4E-49 343.2 20.7 191 182-387 10-205 (206)
3 d1t6na_ c.37.1.19 (A:) Spliceo 100.0 3.1E-45 2.3E-49 343.7 19.7 194 182-389 8-207 (207)
4 d2g9na1 c.37.1.19 (A:21-238) I 100.0 1.9E-44 1.4E-48 340.8 14.4 195 182-390 19-217 (218)
5 d1qdea_ c.37.1.19 (A:) Initiat 100.0 4.4E-43 3.2E-47 330.1 16.6 192 182-389 17-212 (212)
6 d1wrba1 c.37.1.19 (A:164-401) 100.0 8.8E-43 6.4E-47 333.7 15.2 201 182-390 28-238 (238)
7 d1s2ma1 c.37.1.19 (A:46-251) P 100.0 9.3E-42 6.8E-46 319.5 20.4 194 182-390 8-205 (206)
8 d1hv8a1 c.37.1.19 (A:3-210) Pu 100.0 1.2E-41 8.5E-46 319.4 18.6 191 182-389 11-206 (208)
9 d1q0ua_ c.37.1.19 (A:) Probabl 100.0 5.3E-39 3.9E-43 300.8 16.2 193 182-389 8-208 (209)
10 d2p6ra3 c.37.1.19 (A:1-202) He 100.0 3.9E-28 2.8E-32 225.3 17.1 180 182-383 10-195 (202)
11 d1gkub1 c.37.1.16 (B:1-250) He 100.0 5.5E-28 4E-32 229.7 17.3 185 173-381 23-228 (237)
12 d1oywa2 c.37.1.19 (A:1-206) Re 100.0 2.5E-28 1.8E-32 227.1 13.6 182 182-386 9-204 (206)
13 d1wp9a1 c.37.1.19 (A:1-200) pu 99.9 2.5E-23 1.8E-27 191.4 22.6 174 204-390 11-188 (200)
14 d2bmfa2 c.37.1.14 (A:178-482) 99.9 2.1E-23 1.6E-27 203.7 13.3 198 214-461 6-206 (305)
15 d1rifa_ c.37.1.23 (A:) DNA hel 99.7 8.9E-17 6.5E-21 155.8 13.4 155 199-371 110-265 (282)
16 d1yksa1 c.37.1.14 (A:185-324) 99.7 5.8E-17 4.2E-21 138.5 10.5 133 215-369 5-140 (140)
17 d2eyqa3 c.37.1.19 (A:546-778) 99.7 1.1E-15 7.9E-20 143.2 18.8 155 196-373 54-218 (233)
18 d2fz4a1 c.37.1.19 (A:24-229) D 99.7 6.4E-16 4.7E-20 142.7 17.1 154 184-368 39-205 (206)
19 d1gm5a3 c.37.1.19 (A:286-549) 99.6 2.1E-15 1.5E-19 143.8 14.8 165 191-383 78-254 (264)
20 d1a1va1 c.37.1.14 (A:190-325) 99.5 1.2E-14 8.8E-19 124.6 9.6 124 218-368 9-136 (136)
21 d1z3ix2 c.37.1.19 (X:92-389) R 99.0 7.2E-09 5.3E-13 99.8 17.6 159 204-370 57-232 (298)
22 d1z63a1 c.37.1.19 (A:432-661) 98.6 1E-07 7.4E-12 87.9 10.0 152 203-375 13-170 (230)
23 d1tf5a3 c.37.1.19 (A:1-226,A:3 98.5 1.1E-06 8E-11 81.8 16.1 161 194-379 78-263 (273)
24 d2j0sa2 c.37.1.19 (A:244-411) 98.4 2E-07 1.4E-11 82.0 8.1 73 394-473 2-82 (168)
25 d2rb4a1 c.37.1.19 (A:307-474) 98.4 2.5E-07 1.8E-11 81.3 8.5 71 396-473 2-80 (168)
26 d1nkta3 c.37.1.19 (A:-15-225,A 98.4 2.8E-06 2E-10 79.4 15.3 154 207-379 102-278 (288)
27 d1s2ma2 c.37.1.19 (A:252-422) 98.4 4.1E-07 3E-11 80.0 8.1 70 396-473 3-80 (171)
28 d1hv8a2 c.37.1.19 (A:211-365) 98.3 3.2E-07 2.4E-11 79.3 7.1 67 398-473 2-76 (155)
29 d1fuka_ c.37.1.19 (A:) Initiat 98.3 6.1E-07 4.4E-11 78.3 8.1 67 400-473 1-75 (162)
30 d1t5ia_ c.37.1.19 (A:) Spliceo 98.2 1.4E-06 1E-10 76.2 8.5 67 399-473 1-75 (168)
31 d1w36d1 c.37.1.19 (D:2-360) Ex 97.8 3E-05 2.2E-09 75.9 9.4 142 204-366 150-296 (359)
32 d1c4oa2 c.37.1.19 (A:410-583) 97.5 0.00012 8.7E-09 63.9 7.6 41 433-473 31-79 (174)
33 d1oywa3 c.37.1.19 (A:207-406) 97.2 0.00036 2.6E-08 62.2 8.4 67 397-473 4-78 (200)
34 d1t5la2 c.37.1.19 (A:415-595) 97.1 0.00044 3.2E-08 60.7 7.1 41 433-473 31-79 (181)
35 d1c4oa2 c.37.1.19 (A:410-583) 96.9 0.0084 6.1E-07 51.7 13.8 110 256-374 31-148 (174)
36 d1uaaa1 c.37.1.19 (A:2-307) DE 96.7 0.0011 7.9E-08 61.8 7.3 67 204-279 3-69 (306)
37 d1wp9a2 c.37.1.19 (A:201-486) 96.4 0.0024 1.7E-07 59.5 6.8 60 411-473 142-217 (286)
38 d1t5la2 c.37.1.19 (A:415-595) 96.3 0.04 2.9E-06 47.6 14.0 79 256-343 31-112 (181)
39 d1pjra1 c.37.1.19 (A:1-318) DE 96.3 0.0045 3.3E-07 58.0 8.3 64 207-279 16-79 (318)
40 d1jr6a_ c.37.1.14 (A:) HCV hel 96.0 0.00039 2.9E-08 58.2 -0.6 40 433-472 35-75 (138)
41 d2eyqa5 c.37.1.19 (A:779-989) 96.0 0.013 9.5E-07 51.9 9.4 94 255-356 30-126 (211)
42 d1a5ta2 c.37.1.20 (A:1-207) de 95.9 0.013 9.7E-07 51.7 9.3 37 328-364 106-144 (207)
43 d1fuka_ c.37.1.19 (A:) Initiat 95.8 0.037 2.7E-06 46.7 11.2 74 256-338 27-103 (162)
44 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 95.3 0.014 9.9E-07 59.6 7.9 75 207-290 16-93 (623)
45 d1s2ma2 c.37.1.19 (A:252-422) 95.3 0.049 3.6E-06 46.2 10.3 75 256-339 32-109 (171)
46 d1gkub2 c.37.1.16 (B:251-498) 95.3 0.0015 1.1E-07 59.9 0.0 55 410-473 10-67 (248)
47 d1ls1a2 c.37.1.10 (A:89-295) G 95.3 0.15 1.1E-05 44.7 13.7 49 333-381 95-147 (207)
48 d1t5ia_ c.37.1.19 (A:) Spliceo 95.2 0.054 3.9E-06 45.9 10.1 75 256-339 27-104 (168)
49 d2gnoa2 c.37.1.20 (A:11-208) g 95.1 0.038 2.7E-06 48.4 9.2 40 328-367 77-118 (198)
50 d1oywa3 c.37.1.19 (A:207-406) 95.1 0.07 5.1E-06 46.6 10.9 73 256-337 30-105 (200)
51 d1hv8a2 c.37.1.19 (A:211-365) 95.0 0.047 3.4E-06 45.6 9.1 72 256-336 28-102 (155)
52 d1l8qa2 c.37.1.20 (A:77-289) C 94.3 0.14 9.9E-06 45.1 10.9 41 329-370 96-141 (213)
53 d2j0sa2 c.37.1.19 (A:244-411) 94.3 0.15 1.1E-05 43.0 10.7 73 256-337 34-109 (168)
54 d2rb4a1 c.37.1.19 (A:307-474) 94.2 0.12 8.7E-06 43.7 9.9 72 256-336 32-106 (168)
55 d1a1va2 c.37.1.14 (A:326-624) 94.1 0.0062 4.5E-07 56.8 1.1 29 433-461 36-64 (299)
56 d1g6oa_ c.37.1.11 (A:) Hexamer 93.7 0.057 4.2E-06 50.9 7.3 46 211-268 160-205 (323)
57 d1njfa_ c.37.1.20 (A:) delta p 93.6 0.6 4.4E-05 41.1 14.0 41 329-370 114-156 (239)
58 d1t5la1 c.37.1.19 (A:2-414) Nu 93.4 0.064 4.6E-06 52.4 7.3 59 207-279 16-79 (413)
59 d1sxje2 c.37.1.20 (E:4-255) Re 92.7 0.026 1.9E-06 50.4 3.0 40 329-369 130-171 (252)
60 d2fwra1 c.37.1.19 (A:257-456) 92.6 0.025 1.9E-06 49.2 2.7 56 411-473 78-136 (200)
61 d2qy9a2 c.37.1.10 (A:285-495) 92.4 0.35 2.6E-05 42.4 10.1 66 220-297 12-78 (211)
62 d1sxjc2 c.37.1.20 (C:12-238) R 92.1 0.4 2.9E-05 41.6 10.3 40 324-363 93-134 (227)
63 d1tf5a4 c.37.1.19 (A:396-570) 91.6 0.15 1.1E-05 43.5 6.3 48 409-461 15-62 (175)
64 d1vmaa2 c.37.1.10 (A:82-294) G 91.6 0.63 4.6E-05 40.7 10.9 64 220-295 14-78 (213)
65 d1sxjd2 c.37.1.20 (D:26-262) R 91.5 0.27 1.9E-05 42.9 8.5 40 330-369 108-149 (237)
66 d1sxjb2 c.37.1.20 (B:7-230) Re 91.4 0.075 5.5E-06 46.7 4.4 43 328-370 99-143 (224)
67 d1z5za1 c.37.1.19 (A:663-906) 90.7 0.19 1.4E-05 44.8 6.6 58 411-473 68-134 (244)
68 d1j8yf2 c.37.1.10 (F:87-297) G 89.5 0.86 6.3E-05 39.7 9.8 129 220-380 15-150 (211)
69 d1d2na_ c.37.1.20 (A:) Hexamer 89.1 0.81 5.9E-05 40.7 9.6 16 218-234 41-56 (246)
70 d2b8ta1 c.37.1.24 (A:11-149) T 89.1 1.9 0.00014 34.7 11.1 98 221-354 6-104 (139)
71 d1jr6a_ c.37.1.14 (A:) HCV hel 89.0 0.21 1.6E-05 40.7 5.0 66 256-335 35-100 (138)
72 d1c4oa1 c.37.1.19 (A:2-409) Nu 89.0 0.48 3.5E-05 45.8 8.4 69 194-279 3-76 (408)
73 d1iqpa2 c.37.1.20 (A:2-232) Re 89.0 0.59 4.3E-05 40.7 8.4 38 326-363 105-144 (231)
74 d1yksa2 c.37.1.14 (A:325-623) 88.8 0.34 2.5E-05 44.8 6.8 69 256-335 36-104 (299)
75 d1z3ix1 c.37.1.19 (X:390-735) 88.4 0.34 2.5E-05 45.8 6.7 59 411-473 100-166 (346)
76 d1ixza_ c.37.1.20 (A:) AAA dom 88.4 1.2 8.5E-05 39.7 10.2 16 218-234 43-58 (247)
77 d1okkd2 c.37.1.10 (D:97-303) G 88.1 1.9 0.00014 37.3 11.0 17 218-235 7-23 (207)
78 d1gm5a4 c.37.1.19 (A:550-755) 87.7 0.1 7.5E-06 45.8 2.2 95 255-356 28-133 (206)
79 d1ye8a1 c.37.1.11 (A:1-178) Hy 87.7 0.072 5.2E-06 44.6 1.1 52 328-380 97-150 (178)
80 d2p6ra4 c.37.1.19 (A:203-403) 86.8 0.27 2E-05 42.6 4.5 32 419-455 31-62 (201)
81 d1wp9a2 c.37.1.19 (A:201-486) 86.7 2 0.00015 38.5 11.0 73 255-336 160-243 (286)
82 d1e32a2 c.37.1.20 (A:201-458) 86.1 4.3 0.00031 35.8 12.8 16 218-234 39-54 (258)
83 d1tf7a2 c.37.1.11 (A:256-497) 85.9 0.31 2.2E-05 42.7 4.5 43 210-263 14-61 (242)
84 d1gkub2 c.37.1.16 (B:251-498) 85.3 0.29 2.1E-05 43.6 4.0 74 256-340 25-102 (248)
85 d1e9ra_ c.37.1.11 (A:) Bacteri 85.0 0.32 2.3E-05 46.8 4.5 47 213-270 46-92 (433)
86 d1r6bx2 c.37.1.20 (X:169-436) 83.8 0.56 4.1E-05 42.6 5.3 31 333-363 113-152 (268)
87 d2p6ra4 c.37.1.19 (A:203-403) 83.6 10 0.00076 31.9 13.7 118 256-381 40-197 (201)
88 d1jbka_ c.37.1.20 (A:) ClpB, A 83.5 5.9 0.00043 33.6 11.8 119 218-340 44-186 (195)
89 d1fnna2 c.37.1.20 (A:1-276) CD 82.8 0.7 5.1E-05 40.5 5.5 16 218-234 44-59 (276)
90 d1xx6a1 c.37.1.24 (A:2-142) Th 81.9 2.8 0.0002 33.8 8.5 87 217-344 7-94 (141)
91 d1nkta4 c.37.1.19 (A:397-615) 80.6 1.7 0.00012 37.7 6.9 47 410-461 16-62 (219)
92 d1lv7a_ c.37.1.20 (A:) AAA dom 79.7 4.9 0.00035 35.6 10.2 16 218-234 46-61 (256)
93 d1p9ra_ c.37.1.11 (A:) Extrace 76.5 0.98 7.1E-05 43.3 4.5 43 191-243 138-182 (401)
94 d1r7ra3 c.37.1.20 (A:471-735) 76.5 8.2 0.0006 34.0 10.8 16 218-234 42-57 (265)
95 d1xbta1 c.37.1.24 (A:18-150) T 76.4 7.2 0.00052 30.7 9.3 35 220-265 5-39 (133)
96 d2i3ba1 c.37.1.11 (A:1-189) Ca 75.7 1.7 0.00012 35.2 5.3 26 218-245 2-27 (189)
97 d1ofha_ c.37.1.20 (A:) HslU {H 74.1 1.9 0.00014 39.5 5.7 19 216-235 48-66 (309)
98 d1a1va2 c.37.1.14 (A:326-624) 73.0 1.6 0.00011 39.9 4.7 38 256-296 36-73 (299)
99 d2eyqa2 c.37.1.19 (A:349-465) 72.9 1.3 9.6E-05 34.6 3.6 39 419-461 24-62 (117)
100 d1z5za1 c.37.1.19 (A:663-906) 72.4 7.7 0.00056 33.5 9.4 97 225-339 65-165 (244)
101 d1yksa2 c.37.1.14 (A:325-623) 71.9 1.1 8.2E-05 41.1 3.5 29 433-461 36-64 (299)
102 d1pzna2 c.37.1.11 (A:96-349) D 68.8 2.9 0.00021 35.9 5.5 33 209-243 23-60 (254)
103 d1cr2a_ c.37.1.11 (A:) Gene 4 68.0 2.5 0.00018 37.4 5.0 37 217-263 35-71 (277)
104 d1qvra3 c.37.1.20 (A:536-850) 67.5 1.6 0.00011 40.3 3.5 33 315-352 115-149 (315)
105 d1xkqa_ c.2.1.2 (A:) Hypotheti 66.8 8.6 0.00063 33.9 8.5 86 215-315 3-94 (272)
106 d1w44a_ c.37.1.11 (A:) NTPase 66.7 0.45 3.3E-05 44.4 -0.7 39 332-370 184-236 (321)
107 d2p67a1 c.37.1.10 (A:1-327) LA 66.3 20 0.0015 32.5 11.3 74 307-380 170-254 (327)
108 d1g41a_ c.37.1.20 (A:) HslU {H 65.9 1.3 9.1E-05 43.1 2.5 19 216-235 48-66 (443)
109 d1yb1a_ c.2.1.2 (A:) 17-beta-h 64.8 15 0.0011 31.9 9.5 83 215-315 5-93 (244)
110 d1xhla_ c.2.1.2 (A:) Hypotheti 63.9 11 0.00077 33.3 8.5 86 215-315 2-93 (274)
111 d1yt8a4 c.46.1.2 (A:243-372) T 63.4 2.3 0.00017 33.5 3.3 29 433-461 80-108 (130)
112 d1dbqa_ c.93.1.1 (A:) Purine r 62.7 19 0.0014 30.6 10.1 39 419-461 169-207 (282)
113 d1vi2a1 c.2.1.7 (A:107-288) Pu 61.7 8.3 0.00061 31.8 6.9 80 216-314 17-99 (182)
114 d1np6a_ c.37.1.10 (A:) Molybdo 61.6 4.5 0.00033 32.2 5.0 22 220-243 5-26 (170)
115 d2bmfa2 c.37.1.14 (A:178-482) 61.4 3.9 0.00029 36.2 5.0 55 256-314 178-232 (305)
116 d1qvra2 c.37.1.20 (A:149-535) 60.7 64 0.0046 29.7 15.6 139 208-355 32-196 (387)
117 d1z3ix1 c.37.1.19 (X:390-735) 60.1 39 0.0028 30.7 12.1 98 225-340 97-199 (346)
118 d1g0oa_ c.2.1.2 (A:) 1,3,8-tri 59.6 21 0.0015 31.0 9.8 125 214-365 15-152 (272)
119 d1um8a_ c.37.1.20 (A:) ClpX {H 58.9 5.9 0.00043 37.0 5.9 17 218-235 69-85 (364)
120 d1luaa1 c.2.1.7 (A:98-288) Met 58.8 7.8 0.00057 32.2 6.2 81 215-315 21-101 (191)
121 d1bg2a_ c.37.1.9 (A:) Kinesin 57.6 3.5 0.00025 37.8 3.9 25 210-235 67-93 (323)
122 d1w36b1 c.37.1.19 (B:1-485) Ex 56.5 8.4 0.00061 36.2 6.7 58 218-276 17-76 (485)
123 d1fmca_ c.2.1.2 (A:) 7-alpha-h 56.3 16 0.0012 31.8 8.2 84 215-316 9-98 (255)
124 d1urha2 c.46.1.2 (A:149-268) 3 55.3 7.4 0.00054 29.5 5.0 29 431-459 80-108 (120)
125 d1gmxa_ c.46.1.3 (A:) Sulfurtr 55.0 3.7 0.00027 31.0 3.0 27 433-459 58-84 (108)
126 d2qm8a1 c.37.1.10 (A:5-327) Me 55.0 38 0.0028 30.5 10.9 111 268-380 128-252 (323)
127 d1spxa_ c.2.1.2 (A:) Glucose d 53.9 21 0.0015 30.9 8.7 87 215-316 3-95 (264)
128 d2dria_ c.93.1.1 (A:) D-ribose 53.9 57 0.0042 27.0 17.1 26 433-458 181-206 (271)
129 d1geea_ c.2.1.2 (A:) Glucose d 53.5 28 0.002 30.2 9.4 83 215-315 5-94 (261)
130 d1yxma1 c.2.1.2 (A:7-303) Pero 53.0 24 0.0018 31.3 9.0 89 212-315 7-103 (297)
131 d1tq1a_ c.46.1.3 (A:) Thiosulf 52.9 3.6 0.00026 31.6 2.7 28 432-459 71-98 (119)
132 d1zema1 c.2.1.2 (A:3-262) Xyli 52.5 30 0.0022 29.8 9.5 83 215-315 3-91 (260)
133 d1ae1a_ c.2.1.2 (A:) Tropinone 50.6 35 0.0026 29.4 9.6 83 215-315 4-93 (258)
134 d1kaga_ c.37.1.2 (A:) Shikimat 50.4 3.1 0.00023 32.7 1.9 17 217-234 2-18 (169)
135 d1v8ka_ c.37.1.9 (A:) Kinesin 50.4 5.2 0.00038 37.3 3.9 25 210-235 105-131 (362)
136 d2ncda_ c.37.1.9 (A:) Kinesin 50.2 4.5 0.00033 37.8 3.4 26 209-235 115-142 (368)
137 d1goja_ c.37.1.9 (A:) Kinesin 50.0 5.2 0.00038 37.1 3.8 25 210-235 71-97 (354)
138 d1sdma_ c.37.1.9 (A:) Kinesin 50.0 4.6 0.00033 37.7 3.4 25 210-235 66-92 (364)
139 d1n0wa_ c.37.1.11 (A:) DNA rep 49.4 4.3 0.00032 33.3 2.9 32 207-240 8-44 (242)
140 d2zfia1 c.37.1.9 (A:4-352) Kin 49.4 5.6 0.00041 36.8 3.9 25 210-235 78-104 (349)
141 d1tf7a1 c.37.1.11 (A:14-255) C 49.1 9.8 0.00072 31.7 5.3 15 218-233 27-41 (242)
142 d1ly1a_ c.37.1.1 (A:) Polynucl 48.7 3.2 0.00023 32.7 1.7 13 220-233 5-17 (152)
143 d1x88a1 c.37.1.9 (A:18-362) Ki 48.5 5.6 0.00041 36.7 3.7 25 210-235 72-98 (345)
144 d2gc6a1 c.59.1.2 (A:297-425) F 47.6 7.4 0.00054 29.8 3.9 113 333-453 13-127 (129)
145 d1qxna_ c.46.1.3 (A:) Polysulf 47.6 4.9 0.00035 31.8 2.7 27 433-459 82-108 (137)
146 d1ys7a2 c.23.1.1 (A:7-127) Tra 47.0 52 0.0038 24.5 11.4 82 256-370 1-85 (121)
147 d1x1ta1 c.2.1.2 (A:1-260) D(-) 46.7 22 0.0016 30.8 7.4 85 214-315 1-92 (260)
148 d1lw7a2 c.37.1.1 (A:220-411) T 46.0 3.2 0.00023 33.4 1.4 16 217-233 7-22 (192)
149 d1zp6a1 c.37.1.25 (A:6-181) Hy 45.9 3.1 0.00023 33.4 1.2 19 215-234 2-20 (176)
150 d1f9va_ c.37.1.9 (A:) Kinesin 45.3 5.5 0.0004 36.7 3.1 26 210-236 74-101 (342)
151 d2fwra1 c.37.1.19 (A:257-456) 44.7 8.1 0.00059 32.2 3.9 71 256-340 93-166 (200)
152 d1e0ca2 c.46.1.2 (A:136-271) S 44.4 12 0.00086 29.4 4.7 28 432-459 87-114 (136)
153 d1nlfa_ c.37.1.11 (A:) Hexamer 44.1 9.4 0.00068 33.1 4.4 33 211-245 23-55 (274)
154 d1in4a2 c.37.1.20 (A:17-254) H 44.0 5.6 0.00041 34.0 2.8 17 218-235 36-52 (238)
155 d2c07a1 c.2.1.2 (A:54-304) bet 43.8 36 0.0026 29.1 8.5 83 215-315 8-96 (251)
156 d1ixsb2 c.37.1.20 (B:4-242) Ho 43.1 6 0.00043 33.9 2.8 17 218-235 36-52 (239)
157 d1g5ta_ c.37.1.11 (A:) ATP:cor 42.4 5.2 0.00038 32.8 2.1 48 329-376 93-145 (157)
158 d1szpa2 c.37.1.11 (A:145-395) 42.4 5.1 0.00037 33.9 2.2 24 209-233 21-49 (251)
159 d2eyqa5 c.37.1.19 (A:779-989) 41.0 18 0.0013 30.8 5.5 52 417-473 20-81 (211)
160 d1xjca_ c.37.1.10 (A:) Molybdo 40.9 15 0.0011 29.1 5.0 21 222-244 6-26 (165)
161 d1pjra2 c.37.1.19 (A:319-651) 40.3 20 0.0014 31.6 6.2 56 405-461 6-61 (333)
162 d1gvnb_ c.37.1.21 (B:) Plasmid 39.6 8.2 0.0006 33.2 3.2 15 219-234 34-48 (273)
163 d2ae2a_ c.2.1.2 (A:) Tropinone 39.4 72 0.0053 27.1 9.9 83 215-315 6-95 (259)
164 d1vl1a_ c.124.1.1 (A:) 6-phosp 39.4 15 0.0011 31.2 4.9 171 266-461 13-204 (218)
165 d1rhsa2 c.46.1.2 (A:150-293) R 39.2 17 0.0012 28.8 4.9 29 431-459 89-117 (144)
166 d2bdta1 c.37.1.25 (A:1-176) Hy 39.1 6.4 0.00047 31.0 2.2 14 220-234 5-18 (176)
167 d1yt8a1 c.46.1.2 (A:107-242) T 38.9 12 0.00088 29.3 3.9 27 433-459 80-106 (136)
168 d1y63a_ c.37.1.1 (A:) Probable 38.6 6.8 0.0005 31.2 2.3 17 217-234 5-21 (174)
169 d1xu9a_ c.2.1.2 (A:) 11-beta-h 38.4 28 0.002 30.2 6.8 91 207-314 4-100 (269)
170 d1v8za1 c.79.1.1 (A:1-386) Try 38.2 1.1E+02 0.0082 27.5 11.6 103 195-315 47-157 (386)
171 d1iy8a_ c.2.1.2 (A:) Levodione 38.0 73 0.0053 27.1 9.6 85 215-315 2-92 (258)
172 d1xg5a_ c.2.1.2 (A:) Putative 37.3 96 0.007 26.2 10.3 85 215-315 8-98 (257)
173 d1v5wa_ c.37.1.11 (A:) Meiotic 37.2 9.3 0.00068 32.3 3.1 32 195-234 17-53 (258)
174 d1gkya_ c.37.1.1 (A:) Guanylat 37.2 6.5 0.00048 32.4 2.0 15 218-233 2-16 (186)
175 d1rkba_ c.37.1.1 (A:) Adenylat 36.8 6.3 0.00046 31.2 1.8 14 219-233 6-19 (173)
176 d1qkka_ c.23.1.1 (A:) Transcri 36.5 83 0.0061 23.9 9.4 36 332-370 46-84 (140)
177 d1k2wa_ c.2.1.2 (A:) Sorbitol 36.1 53 0.0039 28.0 8.3 100 215-344 3-108 (256)
178 d1g8pa_ c.37.1.20 (A:) ATPase 36.0 6.9 0.00051 35.5 2.1 18 216-234 27-44 (333)
179 d1h4vb1 c.51.1.1 (B:326-421) H 36.0 56 0.0041 23.2 7.2 51 256-307 3-53 (96)
180 d1sxja2 c.37.1.20 (A:295-547) 35.2 8.7 0.00063 32.9 2.5 41 330-370 123-166 (253)
181 d1viaa_ c.37.1.2 (A:) Shikimat 35.0 8.4 0.00061 30.9 2.3 16 218-234 1-16 (161)
182 d1ry6a_ c.37.1.9 (A:) Kinesin 34.3 11 0.00079 34.4 3.2 19 216-235 82-102 (330)
183 d1s96a_ c.37.1.1 (A:) Guanylat 34.3 7.8 0.00057 32.8 2.0 17 216-233 1-17 (205)
184 d1xq1a_ c.2.1.2 (A:) Tropinone 34.1 65 0.0047 27.5 8.6 85 215-317 6-97 (259)
185 d2rhca1 c.2.1.2 (A:5-261) beta 33.8 95 0.0069 26.2 9.7 81 217-315 2-88 (257)
186 d1w5sa2 c.37.1.20 (A:7-293) CD 33.5 5.3 0.00039 34.5 0.8 14 331-344 133-146 (287)
187 d2b2na1 c.37.1.19 (A:26-333) T 33.0 40 0.0029 30.1 7.0 60 258-319 16-90 (308)
188 d1yt8a2 c.46.1.2 (A:6-106) Thi 32.9 17 0.0012 26.3 3.6 27 433-459 58-84 (101)
189 d1ofua1 c.32.1.1 (A:11-208) Ce 32.8 31 0.0022 28.9 5.7 52 207-266 75-127 (198)
190 d1kkma_ c.91.1.2 (A:) HPr kina 32.6 9.8 0.00072 31.6 2.3 19 215-234 12-30 (176)
191 d1ja9a_ c.2.1.2 (A:) 1,3,6,8-t 32.6 54 0.0039 27.9 7.7 83 215-315 4-93 (259)
192 d1w6ua_ c.2.1.2 (A:) 2,4-dieno 32.4 82 0.006 27.0 9.1 85 214-315 22-112 (294)
193 d1p5ja_ c.79.1.1 (A:) L-serine 32.3 71 0.0052 27.9 8.8 83 217-313 21-107 (319)
194 d1vl8a_ c.2.1.2 (A:) Gluconate 31.7 83 0.006 26.6 8.8 125 215-365 3-141 (251)
195 d1r6bx3 c.37.1.20 (X:437-751) 31.7 8.6 0.00063 34.9 1.9 16 219-235 54-69 (315)
196 d1knqa_ c.37.1.17 (A:) Glucona 31.6 8.3 0.0006 30.6 1.6 15 220-235 9-23 (171)
197 d2i1qa2 c.37.1.11 (A:65-322) D 31.5 8.9 0.00065 32.1 1.9 34 209-244 21-59 (258)
198 d1kl7a_ c.79.1.1 (A:) Threonin 31.4 48 0.0035 31.9 7.6 65 217-294 150-214 (511)
199 d1qhxa_ c.37.1.3 (A:) Chloramp 30.9 9.4 0.00068 30.1 1.9 17 216-233 2-18 (178)
200 d1svma_ c.37.1.20 (A:) Papillo 30.2 19 0.0014 33.2 4.2 25 209-234 142-170 (362)
201 d2vapa1 c.32.1.1 (A:23-231) Ce 30.0 36 0.0026 28.7 5.7 50 209-266 91-141 (209)
202 d1uara2 c.46.1.2 (A:145-285) S 29.8 36 0.0027 26.5 5.4 40 420-459 76-116 (141)
203 d1lvga_ c.37.1.1 (A:) Guanylat 29.7 10 0.00075 31.3 2.0 15 218-233 1-15 (190)
204 d1znwa1 c.37.1.1 (A:20-201) Gu 29.0 10 0.00076 30.8 1.9 16 217-233 2-17 (182)
205 d1m8pa3 c.37.1.15 (A:391-573) 28.8 6.3 0.00046 31.3 0.4 19 215-234 4-22 (183)
206 d1zk4a1 c.2.1.2 (A:1-251) R-sp 28.8 88 0.0064 26.4 8.5 82 215-315 4-91 (251)
207 d2fnaa2 c.37.1.20 (A:1-283) Ar 28.8 18 0.0013 30.6 3.6 17 216-233 28-44 (283)
208 d2a5yb3 c.37.1.20 (B:109-385) 28.6 1.1E+02 0.0083 26.0 9.4 30 285-314 136-165 (277)
209 d1ne7a_ c.124.1.1 (A:) Glucosa 28.3 46 0.0033 29.2 6.4 61 260-339 3-74 (281)
210 d1yj5a2 c.37.1.1 (A:351-522) 5 28.1 11 0.00077 30.8 1.7 13 220-233 17-29 (172)
211 g1pyo.1 c.17.1.1 (A:,B:) Caspa 26.7 29 0.0021 30.0 4.6 40 433-472 26-86 (257)
212 d1kgda_ c.37.1.1 (A:) Guanylat 26.4 12 0.00086 30.7 1.7 15 218-233 4-18 (178)
213 d1gega_ c.2.1.2 (A:) meso-2,3- 26.4 1.4E+02 0.01 25.0 9.5 58 255-315 24-87 (255)
214 d1ko7a2 c.91.1.2 (A:130-298) H 26.2 15 0.0011 30.2 2.2 19 215-234 13-31 (169)
215 d1ny5a2 c.37.1.20 (A:138-384) 26.0 21 0.0015 30.8 3.5 20 214-234 20-39 (247)
216 d1wmaa1 c.2.1.2 (A:2-276) Carb 25.9 1.1E+02 0.0077 26.0 8.6 83 216-315 1-90 (275)
217 d1em8a_ c.128.1.1 (A:) DNA pol 25.6 37 0.0027 26.7 4.7 34 415-453 23-56 (147)
218 d1xhfa1 c.23.1.1 (A:2-122) Aer 25.5 98 0.0072 22.8 7.2 83 256-371 2-86 (121)
219 d1khta_ c.37.1.1 (A:) Adenylat 25.5 12 0.00091 29.6 1.7 21 433-453 165-185 (190)
220 d1zaka1 c.37.1.1 (A:3-127,A:15 24.9 13 0.00091 30.4 1.6 14 219-233 5-18 (189)
221 d1ydea1 c.2.1.2 (A:4-253) Reti 24.8 1.1E+02 0.008 25.8 8.3 79 215-315 4-88 (250)
222 d2gdza1 c.2.1.2 (A:3-256) 15-h 24.7 1.3E+02 0.0096 25.1 8.9 84 216-315 2-91 (254)
223 d1o5za1 c.59.1.2 (A:294-430) F 24.7 54 0.0039 24.8 5.6 52 333-384 12-64 (137)
224 g1f2t.1 c.37.1.12 (A:,B:) Rad5 24.5 29 0.0021 29.5 4.2 36 330-365 225-264 (292)
225 d1rz3a_ c.37.1.6 (A:) Hypothet 24.4 13 0.00097 29.9 1.7 13 220-233 24-37 (198)
226 d1ihua2 c.37.1.10 (A:308-586) 24.0 46 0.0033 28.4 5.5 22 215-236 17-38 (279)
227 d1odfa_ c.37.1.6 (A:) Hypothet 23.8 41 0.003 29.8 5.1 13 222-235 32-45 (286)
228 d1hxha_ c.2.1.2 (A:) 3beta/17b 23.5 1.1E+02 0.0079 25.8 8.0 81 215-316 4-90 (253)
229 d1qf6a1 c.51.1.1 (A:533-642) T 23.0 1.3E+02 0.0093 21.7 7.7 51 257-307 8-58 (110)
230 d1qe0a1 c.51.1.1 (A:326-420) H 23.0 1.2E+02 0.0085 21.2 6.9 56 260-315 7-64 (95)
231 d1x6va3 c.37.1.4 (A:34-228) Ad 22.6 10 0.00075 30.6 0.6 16 218-234 20-35 (195)
232 d1ny5a1 c.23.1.1 (A:1-137) Tra 22.6 1.5E+02 0.011 22.2 10.6 49 313-369 32-83 (137)
233 d1e69a_ c.37.1.12 (A:) Smc hea 22.4 38 0.0028 29.3 4.7 44 328-373 239-285 (308)
234 d1rq2a1 c.32.1.1 (A:8-205) Cel 22.4 62 0.0045 26.8 5.8 52 207-266 75-127 (198)
235 d1yt8a3 c.46.1.2 (A:373-529) T 22.1 23 0.0016 28.2 2.7 27 433-459 58-84 (157)
236 d1q7ba_ c.2.1.2 (A:) beta-keto 22.0 1.3E+02 0.0091 25.2 8.1 123 215-367 2-138 (243)
237 d1w5fa1 c.32.1.1 (A:22-215) Ce 21.8 61 0.0045 26.8 5.6 52 207-266 74-126 (194)
238 d1ukza_ c.37.1.1 (A:) Uridylat 21.6 16 0.0012 29.8 1.7 13 220-233 11-23 (196)
239 d1h5qa_ c.2.1.2 (A:) Mannitol 21.5 56 0.0041 27.9 5.6 84 215-315 7-96 (260)
240 d1u94a1 c.37.1.11 (A:6-268) Re 21.3 50 0.0036 28.7 5.1 28 207-235 38-71 (263)
241 d1wu7a1 c.51.1.1 (A:330-426) H 21.0 83 0.0061 22.3 5.7 34 274-307 21-54 (97)
242 d1edoa_ c.2.1.2 (A:) beta-keto 20.8 1.7E+02 0.012 24.3 8.7 77 256-344 25-108 (244)
243 d1yrba1 c.37.1.10 (A:1-244) AT 20.7 30 0.0022 28.7 3.4 13 220-233 3-15 (244)
244 d1d2fa_ c.67.1.3 (A:) Modulato 20.7 2.5E+02 0.018 24.2 11.0 77 256-344 82-179 (361)
245 d1e6ca_ c.37.1.2 (A:) Shikimat 20.6 22 0.0016 28.2 2.3 17 218-235 3-19 (170)
246 d1qf9a_ c.37.1.1 (A:) UMP/CMP 20.4 17 0.0013 29.5 1.6 13 220-233 9-21 (194)
247 d1e4va1 c.37.1.1 (A:1-121,A:15 20.4 18 0.0013 29.0 1.6 14 220-234 3-16 (179)
248 d1guda_ c.93.1.1 (A:) D-allose 20.3 1.3E+02 0.0093 25.0 7.8 37 419-459 182-218 (288)
249 d2ahra2 c.2.1.6 (A:1-152) Pyrr 20.3 86 0.0062 24.2 6.0 80 298-381 15-100 (152)
250 d1zina1 c.37.1.1 (A:1-125,A:16 20.2 18 0.0013 28.8 1.7 14 220-234 3-16 (182)
251 d1ak2a1 c.37.1.1 (A:14-146,A:1 20.2 21 0.0015 28.9 2.0 17 217-234 3-19 (190)
252 d1s3ga1 c.37.1.1 (A:1-125,A:16 20.0 18 0.0013 29.1 1.7 13 220-233 3-15 (182)
No 1
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=6.5e-47 Score=358.58 Aligned_cols=194 Identities=13% Similarity=0.207 Sum_probs=183.9
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~ali 261 (474)
|++.++++|.++||..|||| |.++||.++.|+|++++|||| ||||+||++|+++.+.... ..+++||
T Consensus 24 L~~~l~~~L~~~g~~~pt~I-----Q~~aIp~il~g~dvi~~a~TG-SGKTlayllPil~~l~~~~-------~~~~~li 90 (222)
T d2j0sa1 24 LREDLLRGIYAYGFEKPSAI-----QQRAIKQIIKGRDVIAQSQSG-TGKTATFSISVLQCLDIQV-------RETQALI 90 (222)
T ss_dssp CCHHHHHHHHHHTCCSCCHH-----HHHHHHHHHTTCCEEEECCTT-SSHHHHHHHHHHHTCCTTS-------CSCCEEE
T ss_pred CCHHHHHHHHHCCCCCCCHH-----HHHHHHHHHCCCCeEEEcCcc-hhhhhhhcccccccccccc-------cCceeEE
Confidence 99999999999999999999 999999999999999999999 9999999999998876532 5789999
Q ss_pred EeccHHHHHHHHHHHHhcc-cCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEecccc
Q 011963 262 LVSSQEKAAKVRSVCKPLK-AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD 340 (474)
Q Consensus 262 l~PtreLa~Qi~~~~~~l~-~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad 340 (474)
++||||||.|+++++..+. +.++++.+++||.....+...+.. +++|||+|||||++++..+.+.++++++|||||||
T Consensus 91 l~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~~-~~~Ilv~TPgrl~~~~~~~~~~~~~l~~lVlDEaD 169 (222)
T d2j0sa1 91 LAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY-GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEAD 169 (222)
T ss_dssp ECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHHH-CCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETHH
T ss_pred ecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhcc-CCeEEeCCCCcHHhcccccccccccceeeeecchh
Confidence 9999999999999999994 559999999999999999999988 89999999999999999999999999999999999
Q ss_pred ccCC---hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCceEEEcc
Q 011963 341 SLSK---GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLN 390 (474)
Q Consensus 341 ~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v~v~ 390 (474)
+|++ .+++..|++.++.++|+++||||+|+.+.++++.+|++|+ .|.++
T Consensus 170 ~ll~~~f~~~i~~I~~~l~~~~Q~ilfSAT~~~~v~~l~~~~l~~Pv-~I~V~ 221 (222)
T d2j0sa1 170 EMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPI-RILVK 221 (222)
T ss_dssp HHTSTTTHHHHHHHHTTSCTTCEEEEEESCCCHHHHTTGGGTCSSCE-EECCC
T ss_pred HhhhcCcHHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCE-EEEEe
Confidence 9999 8899999999999999999999999999999999999998 77765
No 2
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.3e-45 Score=343.22 Aligned_cols=191 Identities=17% Similarity=0.243 Sum_probs=179.1
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~ali 261 (474)
|++.++++|.++||+.|||| |.++||.+++|+|++++|||| ||||+||++|+++++... ..++++||
T Consensus 10 L~~~l~~~l~~~g~~~pt~i-----Q~~aip~il~g~dvl~~a~TG-sGKTlayllP~l~~~~~~-------~~~~~~li 76 (206)
T d1veca_ 10 LKRELLMGIFEMGWEKPSPI-----QEESIPIALSGRDILARAKNG-TGKSGAYLIPLLERLDLK-------KDNIQAMV 76 (206)
T ss_dssp CCHHHHHHHHTTTCCSCCHH-----HHHHHHHHHTTCCEEEECCSS-STTHHHHHHHHHHHCCTT-------SCSCCEEE
T ss_pred cCHHHHHHHHHCCCCCCCHH-----HHHHHHHHHcCCCEEeeccCc-cccccccccchhhccccc-------ccCcceEE
Confidence 89999999999999999999 999999999999999999999 999999999999876543 26889999
Q ss_pred EeccHHHHHHHHHHHHhc-ccC-CcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccc
Q 011963 262 LVSSQEKAAKVRSVCKPL-KAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL 339 (474)
Q Consensus 262 l~PtreLa~Qi~~~~~~l-~~~-~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEa 339 (474)
++||||||.|+++++..+ ... ++.+...+|+.....+...+.. +++|||+|||||.+++..+.+.++++++||||||
T Consensus 77 l~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~ivv~TPgrl~~~~~~~~~~~~~l~~lVlDEa 155 (206)
T d1veca_ 77 IVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDD-TVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEA 155 (206)
T ss_dssp ECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHTTS-CCSEEEECHHHHHHHHHTTCSCCTTCCEEEEETH
T ss_pred EeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHHHh-ccCeEEeCCccccccccchhccccccceEEEecc
Confidence 999999999999999998 333 7888899999999988888887 8999999999999999999999999999999999
Q ss_pred cccCC---hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCceEE
Q 011963 340 DSLSK---GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRL 387 (474)
Q Consensus 340 d~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v 387 (474)
|+|++ .+++..|+..+++++|+++||||+|+++.++++.+|++|. .|
T Consensus 156 D~ll~~~f~~~i~~I~~~~~~~~Q~~l~SAT~~~~v~~l~~~~l~~P~-~I 205 (206)
T d1veca_ 156 DKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLEKPY-EI 205 (206)
T ss_dssp HHHTSTTTHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCE-EE
T ss_pred ccccccchHHHHHHHHHhCCCCCEEEEEEecCCHHHHHHHHHHCCCCE-EE
Confidence 99998 8899999999999999999999999999999999999997 55
No 3
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.1e-45 Score=343.66 Aligned_cols=194 Identities=15% Similarity=0.205 Sum_probs=179.3
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~ali 261 (474)
|++.++++|.++||++|||| |.++||.+++|+|++++|||| ||||+||++|+++.+... ..+++++|
T Consensus 8 L~~~l~~~l~~~g~~~pt~i-----Q~~aip~il~g~dvl~~A~TG-sGKTla~~lp~l~~~~~~-------~~~~~~li 74 (207)
T d1t6na_ 8 LKPELLRAIVDCGFEHPSEV-----QHECIPQAILGMDVLCQAKSG-MGKTAVFVLATLQQLEPV-------TGQVSVLV 74 (207)
T ss_dssp CCHHHHHHHHHTTCCCCCHH-----HHHHHHHHHTTCCEEEECCTT-SCHHHHHHHHHHHHCCCC-------TTCCCEEE
T ss_pred cCHHHHHHHHHCCCCCCCHH-----HHHHHHHHHcCCCeEEEeccc-cccccccccceeeeeccc-------CCCceEEE
Confidence 89999999999999999999 999999999999999999999 999999999999876443 26889999
Q ss_pred EeccHHHHHHHHHHHHhcc-cC-CcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccc
Q 011963 262 LVSSQEKAAKVRSVCKPLK-AF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL 339 (474)
Q Consensus 262 l~PtreLa~Qi~~~~~~l~-~~-~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEa 339 (474)
++||||||.|+++.+..+. .. .++++.++||.....+...+.+.+|+|||+|||||.+++..+.++++++++||+|||
T Consensus 75 l~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ilI~TP~rl~~~~~~~~~~l~~l~~lVlDEa 154 (207)
T d1t6na_ 75 MCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDEC 154 (207)
T ss_dssp ECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHHHHHHSCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEESH
T ss_pred EeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHHHHHhcCCCEEEeCcchhhhhccCCceeccccceeehhhh
Confidence 9999999999999999984 44 578889999999999888887668999999999999999999999999999999999
Q ss_pred cccCC----hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCceEEEc
Q 011963 340 DSLSK----GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSL 389 (474)
Q Consensus 340 d~ll~----~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v~v 389 (474)
|+|++ .+++..|++.++.++|+++||||+|.++.++++.+|++|+ .|.|
T Consensus 155 D~ll~~~~~~~~i~~I~~~~~~~~Q~il~SAT~~~~v~~l~~~~l~~P~-~I~V 207 (207)
T d1t6na_ 155 DKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPM-EIFV 207 (207)
T ss_dssp HHHHSSHHHHHHHHHHHHTSCSSSEEEEEESCCCTTTHHHHHTTCSSCE-EEEC
T ss_pred hhhhhcCCcHHHHHHHHHhCCCCCEEEEEeeeCCHHHHHHHHHHCCCCE-EEeC
Confidence 99998 7789999999999999999999999999999999999997 6643
No 4
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.9e-44 Score=340.81 Aligned_cols=195 Identities=14% Similarity=0.239 Sum_probs=178.0
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~ali 261 (474)
|++.++++|.++||.+|||| |++|||+++.|+|++++|||| ||||+||++|+++++... ..++++||
T Consensus 19 L~~~l~~~L~~~g~~~pt~i-----Q~~aip~il~g~dvl~~a~TG-sGKTlayllp~l~~i~~~-------~~~~~ali 85 (218)
T d2g9na1 19 LSESLLRGIYAYGFEKPSAI-----QQRAILPCIKGYDVIAQAQSG-TGKTATFAISILQQIELD-------LKATQALV 85 (218)
T ss_dssp CCHHHHHHHHHHTCCSCCHH-----HHHHHHHHHHTCCEEEECCTT-SSHHHHHHHHHHHHCCTT-------CCSCCEEE
T ss_pred CCHHHHHHHHHCCCCCCCHH-----HHHHHHHHHcCCCEEEEcccc-hhhhhhhhhhhhheeccc-------ccCccEEE
Confidence 99999999999999999999 999999999999999999999 999999999999988543 26899999
Q ss_pred EeccHHHHHHHHHHHHhc-ccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEecccc
Q 011963 262 LVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD 340 (474)
Q Consensus 262 l~PtreLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad 340 (474)
++||+|||.|++.++..+ ...++.+..++++.....+.......+++|||+|||||.+++..+.+.++++++|||||||
T Consensus 86 l~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~l~~lVlDEaD 165 (218)
T d2g9na1 86 LAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEAD 165 (218)
T ss_dssp ECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCSTTTSSSSCCCSEEEECHHHHHHHHHTTSSCSTTCCEEEEESHH
T ss_pred EcccchhhhhHHHHHhhhccccceeEEeeecccchhHHHHHHhcCCCEEEEeCChhHHHHHhcCCcccccceEEEeeecc
Confidence 999999999999999999 5558888888888776665555555579999999999999999999999999999999999
Q ss_pred ccCC---hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCceEEEcc
Q 011963 341 SLSK---GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLN 390 (474)
Q Consensus 341 ~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v~v~ 390 (474)
+|++ .+++..|++.++.++|+++||||+|+.+.++++.+|++|+ .|.|.
T Consensus 166 ~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT~~~~v~~~~~~~l~~pv-~i~v~ 217 (218)
T d2g9na1 166 EMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPI-RILVK 217 (218)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCE-EEECC
T ss_pred hhhcCchHHHHHHHHHhCCCCCeEEEEEecCCHHHHHHHHHHCCCCE-EEEEe
Confidence 9998 8999999999999999999999999999999999999998 77765
No 5
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.4e-43 Score=330.11 Aligned_cols=192 Identities=15% Similarity=0.228 Sum_probs=169.9
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~ali 261 (474)
|++.++++|.++||++|||| |+++||.++.|+|++++|||| ||||+||++|+++++... .++|++||
T Consensus 17 l~~~l~~~L~~~g~~~pt~i-----Q~~aip~il~g~dvl~~a~TG-sGKT~a~~lp~i~~l~~~-------~~~~~~li 83 (212)
T d1qdea_ 17 LDENLLRGVFGYGFEEPSAI-----QQRAIMPIIEGHDVLAQAQSG-TGKTGTFSIAALQRIDTS-------VKAPQALM 83 (212)
T ss_dssp CCHHHHHHHHHHTCCSCCHH-----HHHHHHHHHTTCCEEEECCTT-SSHHHHHHHHHHHHCCTT-------CCSCCEEE
T ss_pred CCHHHHHHHHHCCCCCCCHH-----HHHHHHHHHcCCCEEeecccc-cchhhhhHhhhHhhhhcc-------CCCcceEE
Confidence 99999999999999999999 999999999999999999999 999999999999987543 26899999
Q ss_pred EeccHHHHHHHHHHHHhc-ccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEecccc
Q 011963 262 LVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD 340 (474)
Q Consensus 262 l~PtreLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad 340 (474)
|+||+||+.|++..+..+ ....+.+..++|+.....+...++ +++|+|+||++|..++..+.+.++++++|||||||
T Consensus 84 l~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~IvI~TP~~l~~~~~~~~~~l~~l~~lVlDEad 161 (212)
T d1qdea_ 84 LAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLR--DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEAD 161 (212)
T ss_dssp ECSSHHHHHHHHHHHHHHTTTSCCCEEEECC----------CT--TCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETHH
T ss_pred EcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHHhc--CCcEEEECCCccccccccCceecCcceEEeehhhh
Confidence 999999999999999998 444889999999988887777665 58999999999999999999999999999999999
Q ss_pred ccCC---hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCceEEEc
Q 011963 341 SLSK---GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSL 389 (474)
Q Consensus 341 ~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v~v 389 (474)
+|++ .+++..|++.+++++|+++||||+|+.+.++++.+|++|+ .|.|
T Consensus 162 ~lld~~f~~~v~~I~~~~~~~~Q~vl~SAT~~~~v~~l~~~~l~~Pv-~i~v 212 (212)
T d1qdea_ 162 EMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPV-RILV 212 (212)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTCEEEEEESSCCHHHHHHHHHHCSSCE-EEC-
T ss_pred hhcccchHHHHHHHHHhCCCCCeEEEEEeeCCHHHHHHHHHHCCCCE-EEeC
Confidence 9998 8999999999999999999999999999999999999997 6653
No 6
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=100.00 E-value=8.8e-43 Score=333.72 Aligned_cols=201 Identities=15% Similarity=0.201 Sum_probs=181.3
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhh--hcCCCCCCcEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKE--KEGFSFTGPFL 259 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~--~~~~~~~~~~a 259 (474)
|++.++++|.++||.+|||| |..+||.++.|+|++++|||| ||||+||++|+++++..... .......+|++
T Consensus 28 l~~~l~~~L~~~g~~~pt~i-----Q~~~ip~il~g~dvvi~a~TG-sGKTlayllp~l~~l~~~~~~~~~~~~~~~~~a 101 (238)
T d1wrba1 28 LDPTIRNNILLASYQRPTPI-----QKNAIPAILEHRDIMACAQTG-SGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKC 101 (238)
T ss_dssp CCCSTTTTTTTTTCCSCCHH-----HHHHHHHHHTTCCEEEECCTT-SSHHHHHHHHHHHHHHTTCC------CCBCCSE
T ss_pred CCHHHHHHHHHCCCCCCCHH-----HHHHhhhhhCCCCEEEECCCC-CCcceeeHHHHHHHHHhcccccccccCCCCceE
Confidence 89999999999999999999 999999999999999999999 99999999999999986432 11223468999
Q ss_pred EEEeccHHHHHHHHHHHHhc-ccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEecc
Q 011963 260 LFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDR 338 (474)
Q Consensus 260 lil~PtreLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDE 338 (474)
|||+||+|||.|+++++..+ .+.++++..++|+.....+.+.+.. ++||||+||++|.+++..+.+.+++++++||||
T Consensus 102 lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~ivV~TP~~l~~~~~~~~~~l~~v~~lViDE 180 (238)
T d1wrba1 102 LILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQM-GCHLLVATPGRLVDFIEKNKISLEFCKYIVLDE 180 (238)
T ss_dssp EEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHHHHSS-CCSEEEECHHHHHHHHHTTSBCCTTCCEEEEET
T ss_pred EEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHhhccc-CCceeecCHHHHHhHHccCceeccccceeeeeh
Confidence 99999999999999999998 5559999999999998888888877 899999999999999999999999999999999
Q ss_pred ccccCC---hhHHHHHHhhCC----CCCcEEEEEccCCccHHHHHHHhhcCCceEEEcc
Q 011963 339 LDSLSK---GDTLSLIRQSIS----GKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLN 390 (474)
Q Consensus 339 ad~ll~---~~~l~~Il~~l~----~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v~v~ 390 (474)
||+|++ .+++..|++.+. .++|+++||||+|..+..+++.+|++|+ .|.|+
T Consensus 181 aD~ll~~~f~~~i~~Il~~~~~~~~~~~Q~il~SAT~~~~v~~l~~~~~~~p~-~i~vg 238 (238)
T d1wrba1 181 ADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYI-FMTVG 238 (238)
T ss_dssp HHHHHHTTCHHHHHHHHHSSCCCCGGGCEEEEEESSCCHHHHHHHHHHCSSCE-EEEEC
T ss_pred hhhhhhhccHHHHHHHHHHhcCCCCCCCEEEEEeeeCCHHHHHHHHHHCCCCE-EEEeC
Confidence 999998 789999998764 3689999999999999999999999997 77664
No 7
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=9.3e-42 Score=319.52 Aligned_cols=194 Identities=22% Similarity=0.285 Sum_probs=182.6
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~ali 261 (474)
|++.++++|.++||.+|||| |.++||.++.|+|+++.|||| ||||+||++|+++.+.... .++++++
T Consensus 8 L~~~l~~~L~~~g~~~pt~i-----Q~~aip~il~g~dvi~~a~tG-sGKTlay~lp~i~~~~~~~-------~~~~~~~ 74 (206)
T d1s2ma1 8 LKRELLMGIFEAGFEKPSPI-----QEEAIPVAITGRDILARAKNG-TGKTAAFVIPTLEKVKPKL-------NKIQALI 74 (206)
T ss_dssp CCHHHHHHHHHTTCCSCCHH-----HHHHHHHHHHTCCEEEECCTT-SCHHHHHHHHHHHHCCTTS-------CSCCEEE
T ss_pred CCHHHHHHHHHCCCCCCCHH-----HHHHHHHHHcCCCEEEecCCc-chhhhhhcccccccccccc-------cccccee
Confidence 99999999999999999999 999999999999999999999 9999999999998765532 5789999
Q ss_pred EeccHHHHHHHHHHHHhc-ccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEecccc
Q 011963 262 LVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD 340 (474)
Q Consensus 262 l~PtreLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad 340 (474)
++|+++++.|.+..+..+ ...++++..++|+.....+...+.. +++|||+|||+|++++..+.+.++++++|||||||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~Ili~TP~~l~~~l~~~~~~l~~l~~lV~DEaD 153 (206)
T d1s2ma1 75 MVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNE-TVHILVGTPGRVLDLASRKVADLSDCSLFIMDEAD 153 (206)
T ss_dssp ECSSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHTTS-CCSEEEECHHHHHHHHHTTCSCCTTCCEEEEESHH
T ss_pred eccchhhhhhhhhhhhhcccccCeeEEeecCccchhhHHHHhcc-cceEEEECCcccccccccceeecccceEEEeechh
Confidence 999999999999999998 4459999999999999999988888 89999999999999999999999999999999999
Q ss_pred ccCC---hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCceEEEcc
Q 011963 341 SLSK---GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLN 390 (474)
Q Consensus 341 ~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v~v~ 390 (474)
+|++ .+++..|++.+++.+|+++||||+|+.+..++.++|++|. .|.+.
T Consensus 154 ~l~~~~f~~~v~~I~~~l~~~~Q~il~SATl~~~v~~~~~~~l~~P~-~I~~~ 205 (206)
T d1s2ma1 154 KMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPY-EINLM 205 (206)
T ss_dssp HHSSHHHHHHHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCE-EESCC
T ss_pred hhhhhhhHHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCE-EEEee
Confidence 9999 8999999999999999999999999999999999999997 77664
No 8
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=1.2e-41 Score=319.40 Aligned_cols=191 Identities=15% Similarity=0.234 Sum_probs=176.8
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCC-cEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAK-DILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLL 260 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~-dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~al 260 (474)
|++.++++|.++||.+|||| |.++||.+++|+ |++++|||| ||||++|++|+++.... .+++++|
T Consensus 11 l~~~l~~~l~~~g~~~pt~i-----Q~~~ip~~l~g~~d~iv~a~TG-sGKT~~~~l~~~~~~~~--------~~~~~~l 76 (208)
T d1hv8a1 11 LSDNILNAIRNKGFEKPTDI-----QMKVIPLFLNDEYNIVAQARTG-SGKTASFAIPLIELVNE--------NNGIEAI 76 (208)
T ss_dssp CCHHHHHHHHHHTCCSCCHH-----HHHHHHHHHHTCSEEEEECCSS-SSHHHHHHHHHHHHSCS--------SSSCCEE
T ss_pred CCHHHHHHHHHCCCCCCCHH-----HHHHHHHHHcCCCCeeeechhc-ccccceeeccccccccc--------ccCcceE
Confidence 89999999999999999999 999999999986 999999999 99999999999976443 2689999
Q ss_pred EEeccHHHHHHHHHHHHhc-ccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccc
Q 011963 261 FLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL 339 (474)
Q Consensus 261 il~PtreLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEa 339 (474)
||+||++||.|+++++..+ ...++++..++|+.+...+...+. ++||||||||+|+++++++.++++++++||||||
T Consensus 77 il~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l~--~~~IlV~TP~~l~~~l~~~~~~~~~l~~lViDEa 154 (208)
T d1hv8a1 77 ILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK--NANIVVGTPGRILDHINRGTLNLKNVKYFILDEA 154 (208)
T ss_dssp EECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHHH--TCSEEEECHHHHHHHHHTTCSCTTSCCEEEEETH
T ss_pred EEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhcC--CCCEEEEChHHHHHHHHcCCCCcccCcEEEEECh
Confidence 9999999999999999999 455899999999999988887775 5899999999999999999999999999999999
Q ss_pred cccCC---hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCceEEEc
Q 011963 340 DSLSK---GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSL 389 (474)
Q Consensus 340 d~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v~v 389 (474)
|+|++ .+++..|++.+++++|+++||||+|+.+.++++.+|++|. .|.+
T Consensus 155 d~l~~~~~~~~i~~I~~~~~~~~Q~i~~SAT~~~~v~~~~~~~l~~~~-~I~~ 206 (208)
T d1hv8a1 155 DEMLNMGFIKDVEKILNACNKDKRILLFSATMPREILNLAKKYMGDYS-FIKA 206 (208)
T ss_dssp HHHHTTTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHHHHHHHCCSEE-EEEC
T ss_pred HHhhcCCChHHHHHHHHhCCCCCeEEEEEccCCHHHHHHHHHHCCCCe-EEEE
Confidence 99998 7889999999999999999999999999999999999986 6654
No 9
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=5.3e-39 Score=300.76 Aligned_cols=193 Identities=15% Similarity=0.170 Sum_probs=173.8
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~ali 261 (474)
|++.++++|+++||.+|||| |.+|||.+++|+|++++|||| ||||+||++|+++.+.... ..+..++
T Consensus 8 L~~~l~~~l~~~g~~~pt~i-----Q~~aip~~l~G~dvii~a~TG-SGKTlayllp~l~~~~~~~-------~~~~~~~ 74 (209)
T d1q0ua_ 8 FQPFIIEAIKTLRFYKPTEI-----QERIIPGALRGESMVGQSQTG-TGKTHAYLLPIMEKIKPER-------AEVQAVI 74 (209)
T ss_dssp CCHHHHHHHHHTTCCSCCHH-----HHHHHHHHHHTCCEEEECCSS-HHHHHHHHHHHHHHCCTTS-------CSCCEEE
T ss_pred cCHHHHHHHHHCCCCCCCHH-----HHHHHHHHHCCCCeEeecccc-cccceeeeeeecccccccc-------ccccccc
Confidence 89999999999999999999 999999999999999999999 9999999999998765532 5778999
Q ss_pred EeccHHHHHHHHHHHHhc-cc----CCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEe
Q 011963 262 LVSSQEKAAKVRSVCKPL-KA----FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVV 336 (474)
Q Consensus 262 l~PtreLa~Qi~~~~~~l-~~----~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lVi 336 (474)
++|+++++.+.+..+... .. ....+.++.|+.+...+...+.. +|+|||+||+++.+++.+....++++++|||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Ilv~TP~~l~~~~~~~~~~~~~l~~lVi 153 (209)
T d1q0ua_ 75 TAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKALEKLNV-QPHIVIGTPGRINDFIREQALDVHTAHILVV 153 (209)
T ss_dssp ECSSHHHHHHHHHHHHHHHTTSCGGGCCCEEEECCCSHHHHTTCCCSS-CCSEEEECHHHHHHHHHTTCCCGGGCCEEEE
T ss_pred cccccchhHHHHHHHHhhhccccccccccccccccchhhHHHHHHhcc-CceEEEecCchhhhhhhhhccccccceEEEE
Confidence 999999999999888775 21 25677778888877766666666 8999999999999999999999999999999
Q ss_pred ccccccCC---hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCceEEEc
Q 011963 337 DRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSL 389 (474)
Q Consensus 337 DEad~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v~v 389 (474)
||||+|++ .+++..|+..+++++|+++||||+|+++.++++.+|++|. .|.|
T Consensus 154 DEad~ll~~~f~~~v~~I~~~~~~~~Q~il~SATl~~~v~~l~~~~l~~p~-~i~V 208 (209)
T d1q0ua_ 154 DEADLMLDMGFITDVDQIAARMPKDLQMLVFSATIPEKLKPFLKKYMENPT-FVHV 208 (209)
T ss_dssp CSHHHHHHTTCHHHHHHHHHTSCTTCEEEEEESCCCGGGHHHHHHHCSSCE-EEEC
T ss_pred eecccccccccHHHHHHHHHHCCCCCEEEEEEccCCHHHHHHHHHHCCCCE-EEEe
Confidence 99999999 8899999999999999999999999999999999999997 6654
No 10
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.95 E-value=3.9e-28 Score=225.26 Aligned_cols=180 Identities=17% Similarity=0.145 Sum_probs=145.5
Q ss_pred hHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEE
Q 011963 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261 (474)
Q Consensus 182 l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~ali 261 (474)
+++.+...|++.||.+|+|+ |.++|+.+++|+|++++|||| ||||++|+++++..+.. +.++||
T Consensus 10 ~~~~~~~~l~~~g~~~l~~~-----Q~~ai~~l~~~~~~il~apTG-sGKT~~a~l~i~~~~~~----------~~~vl~ 73 (202)
T d2p6ra3 10 ISSYAVGILKEEGIEELFPP-----QAEAVEKVFSGKNLLLAMPTA-AGKTLLAEMAMVREAIK----------GGKSLY 73 (202)
T ss_dssp HHHHHHHHHHCC---CCCCC-----CHHHHHHHTTCSCEEEECSSH-HHHHHHHHHHHHHHHHT----------TCCEEE
T ss_pred hhHHHHHHHHHcCCCCCCHH-----HHHHHHHHHcCCCEEEEcCCC-CchhHHHHHHHHHHhhc----------cCccee
Confidence 88999999999999999999 999999999999999999999 99999999999987754 458999
Q ss_pred EeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccc
Q 011963 262 LVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS 341 (474)
Q Consensus 262 l~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ 341 (474)
|+||++|+.|+++.++.+.....++....|+..... .... .++|+++||..+..++......+.++.+||+||+|+
T Consensus 74 l~P~~~L~~q~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~-~~~ii~~~~~~~~~~~~~~~~~~~~~~~ii~DE~h~ 149 (202)
T d2p6ra3 74 VVPLRALAGEKYESFKKWEKIGLRIGISTGDYESRD---EHLG-DCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHL 149 (202)
T ss_dssp EESSHHHHHHHHHHHTTTTTTTCCEEEECSSCBCCS---SCST-TCSEEEEEHHHHHHHHHTTCSGGGGCCEEEETTGGG
T ss_pred ecccHHHHHHHHHHHHHHhhccccceeeccCccccc---cccc-ccceeeeccHHHHHHHhccchhhhhhhhccccHHHH
Confidence 999999999999999988665667766666654332 1122 689999999999999988888899999999999999
Q ss_pred cCC---hhH---HHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCC
Q 011963 342 LSK---GDT---LSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGS 383 (474)
Q Consensus 342 ll~---~~~---l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p 383 (474)
+.+ ... +-..+..+++++|++++|||+|+ ..+++ .||+.+
T Consensus 150 ~~~~~r~~~~~~~l~~i~~~~~~~~~l~lSATl~n-~~~~~-~~l~~~ 195 (202)
T d2p6ra3 150 LDSEKRGATLEILVTKMRRMNKALRVIGLSATAPN-VTEIA-EWLDAD 195 (202)
T ss_dssp GGCTTTHHHHHHHHHHHHHHCTTCEEEEEECCCTT-HHHHH-HHTTCE
T ss_pred hcccccchHHHHHHHHHHhcCCCCcEEEEcCCCCc-HHHHH-HHcCCC
Confidence 987 222 33334445678999999999987 66666 455443
No 11
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.95 E-value=5.5e-28 Score=229.75 Aligned_cols=185 Identities=10% Similarity=0.079 Sum_probs=138.0
Q ss_pred CCChhHHhhhHHHHHHHHHhCCCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCC
Q 011963 173 DCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGF 252 (474)
Q Consensus 173 ~~p~~~~~~l~~~i~~~l~~~g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~ 252 (474)
.+|..+ +.+.+.+. -+.+|.+|+|+ |.++||.++.|+|++++|||| ||||++|++|++..+.
T Consensus 23 ~~~~~~---~~~~~~~~-~~~~~~~p~~~-----Q~~~i~~~l~g~~~~i~apTG-sGKT~~~~~~~~~~~~-------- 84 (237)
T d1gkub1 23 LFPEDF---LLKEFVEF-FRKCVGEPRAI-----QKMWAKRILRKESFAATAPTG-VGKTSFGLAMSLFLAL-------- 84 (237)
T ss_dssp CCTTHH---HHHHHHHH-HHTTTCSCCHH-----HHHHHHHHHTTCCEECCCCBT-SCSHHHHHHHHHHHHT--------
T ss_pred cCccch---hHHHHHHH-HHhccCCCCHH-----HHHHHHHHHCCCCEEEEecCC-ChHHHHHHHHHHHHHH--------
Confidence 345554 55555554 46689999999 999999999999999999999 9999999999985543
Q ss_pred CCCCcEEEEEeccHHHHHHHHHHHHhc-ccCCcE----EEEEecCCCHHHHHHHHhc-CCCcEEEEChHHHHHHHHcCCC
Q 011963 253 SFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIH----TVSLHPGAAIDHQITGLRS-CEPEFLVSTPERLLKLVSLKAI 326 (474)
Q Consensus 253 ~~~~~~alil~PtreLa~Qi~~~~~~l-~~~~i~----v~~~~gg~~~~~q~~~l~~-~~~~IlV~TP~rL~~ll~~~~~ 326 (474)
.+.++|||+||++|+.|+++.++.+ ...++. +....++.....+...+.. ..++|||+||++|.+. ..
T Consensus 85 --~~~rvliv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ilv~Tp~~l~~~----~~ 158 (237)
T d1gkub1 85 --KGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKH----YR 158 (237)
T ss_dssp --TSCCEEEEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHHC----ST
T ss_pred --hcCeEEEEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhccccccceeccChHHHHHh----hh
Confidence 2568999999999999999999997 444543 3444555554444444332 2589999999998653 33
Q ss_pred CCCCcceEEeccccccCC-hhHHHHHHhhC-------------CCCCcEEEEEccCCccHHHHH-HHhhc
Q 011963 327 DVSGVSLLVVDRLDSLSK-GDTLSLIRQSI-------------SGKPHTVVFNDCLTYTSVPAV-QNLLL 381 (474)
Q Consensus 327 ~l~~l~~lViDEad~ll~-~~~l~~Il~~l-------------~~~~q~llfSAT~~~~v~~l~-~~~l~ 381 (474)
.+++++++||||||.|++ ...+..++..+ +...|++++|||+++.+...+ +.+++
T Consensus 159 ~~~~~~~vVvDE~d~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~SAT~~~~~~~~l~r~ll~ 228 (237)
T d1gkub1 159 ELGHFDFIFVDDVDAILKASKNVDKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGKKAELFRQLLN 228 (237)
T ss_dssp TSCCCSEEEESCHHHHHTSTHHHHHHHHHTTEEEETTTTEEEECCSSEEEECCCCSCCCTTHHHHHHHHC
T ss_pred hcCCCCEEEEEChhhhhhcccchhHHHHhcCChHHHHHHHhhCCCCCeEEEEeCCCCcccHHHHHHHHhC
Confidence 567899999999999988 44444444432 467899999999998765443 44544
No 12
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=2.5e-28 Score=227.05 Aligned_cols=182 Identities=16% Similarity=0.156 Sum_probs=140.0
Q ss_pred hHHHHHHHHHhC-CCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEE
Q 011963 182 CLNAIENAMRHD-GVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLL 260 (474)
Q Consensus 182 l~~~i~~~l~~~-g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~al 260 (474)
|.+.+.+.|++. ||..++|. |.++|+++++|+|++++|||| ||||++|.+|++. ...+++
T Consensus 9 l~~~~~~~l~~~fg~~~~rp~-----Q~~ai~~~l~g~~vlv~apTG-sGKT~~~~~~~~~-------------~~~~~~ 69 (206)
T d1oywa2 9 LESGAKQVLQETFGYQQFRPG-----QEEIIDTVLSGRDCLVVMPTG-GGKSLCYQIPALL-------------LNGLTV 69 (206)
T ss_dssp HHHHHHHHHHHTTCCSSCCTT-----HHHHHHHHHTTCCEEEECSCH-HHHHHHHHHHHHH-------------SSSEEE
T ss_pred CCHHHHHHHHHhcCCCCCCHH-----HHHHHHHHHcCCCEEEEcCCC-CCCcchhhhhhhh-------------ccCceE
Confidence 778888889888 99999988 999999999999999999999 9999999999873 355899
Q ss_pred EEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHH---HHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEec
Q 011963 261 FLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAID---HQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVD 337 (474)
Q Consensus 261 il~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~---~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViD 337 (474)
|++|+++|+.|..+.++.+ +.......+..... ........+..+|+++||.++............++.+||+|
T Consensus 70 ~v~P~~~L~~q~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~~v~~lviD 146 (206)
T d1oywa2 70 VVSPLISLMKDQVDQLQAN---GVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVD 146 (206)
T ss_dssp EECSCHHHHHHHHHHHHHT---TCCEEEECTTSCHHHHHHHHHHHHHTCCSEEEECHHHHTSTTHHHHHTTSCEEEEEES
T ss_pred EeccchhhhhhHHHHHHhh---cccccccccccccccchhHHHHHhcCCceEEEEechhhhchhhcccchhheeeeeeee
Confidence 9999999999999998877 23333333332222 22223333478999999999876554555567789999999
Q ss_pred cccccCC--------hhHHHHHHhhCCCCCcEEEEEccCCccHHH-HHHHh-hcCCceE
Q 011963 338 RLDSLSK--------GDTLSLIRQSISGKPHTVVFNDCLTYTSVP-AVQNL-LLGSINR 386 (474)
Q Consensus 338 Ead~ll~--------~~~l~~Il~~l~~~~q~llfSAT~~~~v~~-l~~~~-l~~p~~~ 386 (474)
|||++.+ ...+..++..++ ++|+++||||+|+.+.+ +++.+ +.+|++.
T Consensus 147 EaH~~~~~~~~~~~~~~~~~~l~~~~~-~~~ii~lSATl~~~v~~di~~~L~l~~p~v~ 204 (206)
T d1oywa2 147 EAHCISQWGHDFRPEYAALGQLRQRFP-TLPFMALTATADDTTRQDIVRLLGLNDPLIQ 204 (206)
T ss_dssp SGGGGCTTSSCCCHHHHGGGGHHHHCT-TSCEEEEESCCCHHHHHHHHHHHTCCSCEEE
T ss_pred eeeeeeccccchHHHHHHHHHHHHhCC-CCceEEEEeCCCHHHHHHHHHHcCCCCCcEE
Confidence 9999987 123344555554 69999999999998865 44443 6888533
No 13
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.91 E-value=2.5e-23 Score=191.44 Aligned_cols=174 Identities=11% Similarity=0.053 Sum_probs=134.4
Q ss_pred chhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcc-cC
Q 011963 204 NSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLK-AF 282 (474)
Q Consensus 204 ~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~-~~ 282 (474)
++||.+++..+. ++|+|++|||| ||||+++++++...+.. .+.++|||+||++|+.|.++.+..+. ..
T Consensus 11 r~~Q~~~~~~~~-~~n~lv~~pTG-sGKT~i~~~~~~~~~~~---------~~~~il~i~P~~~L~~q~~~~~~~~~~~~ 79 (200)
T d1wp9a1 11 RIYQEVIYAKCK-ETNCLIVLPTG-LGKTLIAMMIAEYRLTK---------YGGKVLMLAPTKPLVLQHAESFRRLFNLP 79 (200)
T ss_dssp CHHHHHHHHHGG-GSCEEEECCTT-SCHHHHHHHHHHHHHHH---------SCSCEEEECSSHHHHHHHHHHHHHHBCSC
T ss_pred CHHHHHHHHHHh-cCCeEEEeCCC-CcHHHHHHHHHHHHHHh---------cCCcEEEEcCchHHHHHHHHHHHHhhccc
Confidence 466999998875 56899999999 99999999888766654 24579999999999999999999984 44
Q ss_pred CcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC---hhHHHHHHhhCCCCC
Q 011963 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK---GDTLSLIRQSISGKP 359 (474)
Q Consensus 283 ~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~---~~~l~~Il~~l~~~~ 359 (474)
+.++...+++.........+.. ++|+|+||+++..++....+.++++.++|+||||++.. ...+...+.....++
T Consensus 80 ~~~v~~~~~~~~~~~~~~~~~~--~~i~i~t~~~~~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~~~ 157 (200)
T d1wp9a1 80 PEKIVALTGEKSPEERSKAWAR--AKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAKNP 157 (200)
T ss_dssp GGGEEEECSCSCHHHHHHHHHH--CSEEEECHHHHHHHHHTTSCCTTSCSEEEEETGGGCSTTCHHHHHHHHHHHHCSSC
T ss_pred ccceeeeecccchhHHHHhhhc--ccccccccchhHHHHhhhhhhccccceEEEEehhhhhcchhHHHHHHHHHhcCCCC
Confidence 7888888888777665555544 68999999999999998888899999999999999987 233333333345678
Q ss_pred cEEEEEccCCccHHHHHHHhhcCCceEEEcc
Q 011963 360 HTVVFNDCLTYTSVPAVQNLLLGSINRLSLN 390 (474)
Q Consensus 360 q~llfSAT~~~~v~~l~~~~l~~p~~~v~v~ 390 (474)
+++++|||.+.....+...+-.-....|.+.
T Consensus 158 ~~l~~SATp~~~~~~~~~~~~~l~~~~i~~~ 188 (200)
T d1wp9a1 158 LVIGLTASPGSTPEKIMEVINNLGIEHIEYR 188 (200)
T ss_dssp CEEEEESCSCSSHHHHHHHHHHTTCCEEEEC
T ss_pred cEEEEEecCCCcHHHHHHHHhcCCceEEEeC
Confidence 9999999987766655443322222245544
No 14
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=99.89 E-value=2.1e-23 Score=203.68 Aligned_cols=198 Identities=11% Similarity=0.057 Sum_probs=130.7
Q ss_pred HhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 011963 214 YSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGA 293 (474)
Q Consensus 214 ~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~ 293 (474)
+..|+++|+.|||| ||||++|++|++...... +.++|||+|||+||.|+++.+..+ ++.+.....+
T Consensus 6 ~~~~~~~lv~~~TG-sGKT~~~l~~~~~~~~~~---------~~~~lvi~Ptr~La~q~~~~l~~~---~~~~~~~~~~- 71 (305)
T d2bmfa2 6 FRKKRLTIMDLHPG-AGKTKRYLPAIVREAIKR---------GLRTLILAPTRVVAAEMEEALRGL---PIRYQTPAIR- 71 (305)
T ss_dssp SSTTCEEEECCCTT-SSTTTTHHHHHHHHHHHH---------TCCEEEEESSHHHHHHHHHHTTTS---CCBCCC-----
T ss_pred hhcCCcEEEEECCC-CCHHHHHHHHHHHHHHhc---------CCEEEEEccHHHHHHHHHHHHhcC---CcceeeeEEe-
Confidence 45789999999999 999999988988766652 668999999999999999887665 2221111111
Q ss_pred CHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC-hhHHHHHHhhC--CCCCcEEEEEccCCc
Q 011963 294 AIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK-GDTLSLIRQSI--SGKPHTVVFNDCLTY 370 (474)
Q Consensus 294 ~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~-~~~l~~Il~~l--~~~~q~llfSAT~~~ 370 (474)
........|+++||+.|..++.. ...+.++++|||||||++.. ...+..++..+ ....|++++|||.+.
T Consensus 72 -------~~~~~~~~i~~~t~~~l~~~~~~-~~~~~~~~~vViDE~H~~~~~~~~~~~~l~~~~~~~~~~~v~~SAT~~~ 143 (305)
T d2bmfa2 72 -------AEHTGREIVDLMCHATFTMRLLS-PIRVPNYNLIIMDEAHFTDPASIAARGYISTRVEMGEAAGIFMTATPPG 143 (305)
T ss_dssp -----------CCCSEEEEEHHHHHHHHTS-SSCCCCCSEEEEESTTCCSHHHHHHHHHHHHHHHHTSCEEEEECSSCTT
T ss_pred -------ecccCccccccCCcHHHHHHHhc-CccccceeEEEeeeeeecchhhHHHHHHHHHhhccccceEEEeecCCCc
Confidence 11122568999999988777654 45578899999999999977 33333333333 356899999999986
Q ss_pred cHHHHHHHhhcCCceEEEccCCcccccCCcEEEEEEcCCchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHH
Q 011963 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450 (474)
Q Consensus 371 ~v~~l~~~~l~~p~~~v~v~~~~~~~~~~i~q~~~~~~~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~ 450 (474)
....+. ..... +......+.. ..+. ..+..+.. . .+++||||+++++|+.++
T Consensus 144 ~~~~~~---~~~~~---------------~~~~~~~~~~-~~~~----~~~~~~~~--~---~~~~lvf~~~~~~~~~l~ 195 (305)
T d2bmfa2 144 SRDPFP---QSNAP---------------IMDEEREIPE-RSWN----SGHEWVTD--F---KGKTVWFVPSIKAGNDIA 195 (305)
T ss_dssp CCCSSC---CCSSC---------------EEEEECCCCC-SCCS----SCCHHHHS--S---CSCEEEECSCHHHHHHHH
T ss_pred ceeeec---ccCCc---------------ceEEEEeccH-HHHH----HHHHHHHh--h---CCCEEEEeccHHHHHHHH
Confidence 422110 00111 1111111111 1111 11111111 1 679999999999999999
Q ss_pred HHHhhCCCccc
Q 011963 451 STLKCKGYSIS 461 (474)
Q Consensus 451 ~~L~~~gi~v~ 461 (474)
..|+..|+.+.
T Consensus 196 ~~L~~~~~~~~ 206 (305)
T d2bmfa2 196 ACLRKNGKKVI 206 (305)
T ss_dssp HHHHHHTCCCE
T ss_pred HHHHhCCCCEE
Confidence 99999999876
No 15
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=99.68 E-value=8.9e-17 Score=155.78 Aligned_cols=155 Identities=11% Similarity=0.048 Sum_probs=115.7
Q ss_pred ccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHh
Q 011963 199 NPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKP 278 (474)
Q Consensus 199 tpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~ 278 (474)
.++..++||.+|+..++..+..++.+||| +|||+..++ ++..+... ...++|||||+++|+.|.++.+..
T Consensus 110 ~~~~~rdyQ~~av~~~l~~~~~il~~pTG-sGKT~i~~~-i~~~~~~~--------~~~k~Liivp~~~Lv~Q~~~~f~~ 179 (282)
T d1rifa_ 110 KRIEPHWYQKDAVFEGLVNRRRILNLPTS-AGRSLIQAL-LARYYLEN--------YEGKILIIVPTTALTTQMADDFVD 179 (282)
T ss_dssp EECCCCHHHHHHHHHHHHHSEEEECCCTT-SCHHHHHHH-HHHHHHHH--------CSSEEEEECSSHHHHHHHHHHHHH
T ss_pred CccccchHHHHHHHHHHhcCCceeEEEcc-cCccHHHHH-HHHHhhhc--------ccceEEEEEcCchhHHHHHHHHHH
Confidence 36788999999999999999999999999 999987644 33333332 244899999999999999999998
Q ss_pred cccC-CcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCChhHHHHHHhhCCC
Q 011963 279 LKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG 357 (474)
Q Consensus 279 l~~~-~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~~~~l~~Il~~l~~ 357 (474)
+... ...+..+++|..... .... ..+|+|+|+..+..+ ....++.+.+||+||||++- ...+..|+..+..
T Consensus 180 ~~~~~~~~~~~~~~g~~~~~---~~~~-~~~i~i~t~qs~~~~---~~~~~~~f~~VIvDEaH~~~-a~~~~~il~~~~~ 251 (282)
T d1rifa_ 180 YRLFSHAMIKKIGGGASKDD---KYKN-DAPVVVGTWQTVVKQ---PKEWFSQFGMMMNDECHLAT-GKSISSIISGLNN 251 (282)
T ss_dssp HTSCCGGGEEECSTTCSSTT---CCCT-TCSEEEECHHHHTTS---CGGGGGGEEEEEEETGGGCC-HHHHHHHTTTCTT
T ss_pred hhccccccceeecceecccc---cccc-cceEEEEeeehhhhh---cccccCCCCEEEEECCCCCC-chhHHHHHHhccC
Confidence 7433 455666777754321 1112 468999999876543 22345678999999999876 5667788877765
Q ss_pred CCcEEEEEccCCcc
Q 011963 358 KPHTVVFNDCLTYT 371 (474)
Q Consensus 358 ~~q~llfSAT~~~~ 371 (474)
....++||||++..
T Consensus 252 ~~~rlGlTaT~~~~ 265 (282)
T d1rifa_ 252 CMFKFGLSGSLRDG 265 (282)
T ss_dssp CCEEEEECSSCCTT
T ss_pred CCeEEEEEeecCCC
Confidence 45569999998665
No 16
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.68 E-value=5.8e-17 Score=138.53 Aligned_cols=133 Identities=9% Similarity=0.001 Sum_probs=92.1
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
-.|++++++|||| ||||+.++..++..... .+.+++|++|+++|+.|.++.+... +..+....+...
T Consensus 5 ~~~~~~il~~~tG-sGKT~~~~~~~~~~~~~---------~~~~vli~~p~~~l~~q~~~~~~~~---~~~~~~~~~~~~ 71 (140)
T d1yksa1 5 KKGMTTVLDFHPG-AGKTRRFLPQILAECAR---------RRLRTLVLAPTRVVLSEMKEAFHGL---DVKFHTQAFSAH 71 (140)
T ss_dssp STTCEEEECCCTT-SSTTTTHHHHHHHHHHH---------TTCCEEEEESSHHHHHHHHHHTTTS---CEEEESSCCCCC
T ss_pred HcCCcEEEEcCCC-CChhHHHHHHHHHHhhh---------cCceeeeeecchhHHHHHHHHhhhh---hhhhcccccccc
Confidence 4588999999999 99998887666655544 3668999999999999998876544 333222221111
Q ss_pred HHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC-hhHHHHHHhhC--CCCCcEEEEEccCC
Q 011963 295 IDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK-GDTLSLIRQSI--SGKPHTVVFNDCLT 369 (474)
Q Consensus 295 ~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~-~~~l~~Il~~l--~~~~q~llfSAT~~ 369 (474)
. .....+.+.|...+.... .....+.+++++||||||++.. ......++..+ ..+.+++++|||.|
T Consensus 72 ~--------~~~~~~~~~~~~~l~~~~-~~~~~~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~~~~~~~~l~lTATPp 140 (140)
T d1yksa1 72 G--------SGREVIDAMCHATLTYRM-LEPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRARANESATILMTATPP 140 (140)
T ss_dssp C--------CSSCCEEEEEHHHHHHHH-TSSSCCCCCSEEEETTTTCCSHHHHHHHHHHHHHHHTTSCEEEEECSSCT
T ss_pred c--------ccccchhhhhHHHHHHHH-hccccccceeEEEEccccccChhhHHHHHHHHHHhhCCCCCEEEEEcCCC
Confidence 0 114568888888876644 3456678999999999998855 22222222222 45799999999987
No 17
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.67 E-value=1.1e-15 Score=143.20 Aligned_cols=155 Identities=11% Similarity=0.047 Sum_probs=122.5
Q ss_pred CccccCCCchhhHHHHHHHhc----CC--cEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHH
Q 011963 196 EQDNPLFVNSWGIEFWKCYSS----AK--DILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKA 269 (474)
Q Consensus 196 ~~ptpi~~~~~Q~~~i~~~l~----g~--dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa 269 (474)
..+|+= |..+|..+.. ++ +.|+++.|| ||||..|+..++..+.. |-++++++||-.|+
T Consensus 54 ~~lt~~-----Q~~~~~~i~~~~~~~~~~~~LL~GdvG-sGKT~V~~~a~~~~~~~----------g~qv~~l~Pt~~La 117 (233)
T d2eyqa3 54 FETTPD-----QAQAINAVLSDMCQPLAMDRLVCGDVG-FGKTEVAMRAAFLAVDN----------HKQVAVLVPTTLLA 117 (233)
T ss_dssp SCCCHH-----HHHHHHHHHHHHHSSSCCEEEEECCCC-TTTHHHHHHHHHHHHTT----------TCEEEEECSSHHHH
T ss_pred cccchh-----HHHHHHHHHHHHhccCccCeEEEcCCC-CCcHHHHHHHHHHHHHc----------CCceEEEccHHHhH
Confidence 355665 9998877643 33 889999999 99999999988876643 67999999999999
Q ss_pred HHHHHHHHhc-ccCCcEEEEEecCCCHHHH---HHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCCh
Q 011963 270 AKVRSVCKPL-KAFGIHTVSLHPGAAIDHQ---ITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKG 345 (474)
Q Consensus 270 ~Qi~~~~~~l-~~~~i~v~~~~gg~~~~~q---~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~~ 345 (474)
.|.+..++.+ ..+++.+..++|+.+.... +..+..+.++|||||--.|. ..+.+.+|.++||||-|+..-
T Consensus 118 ~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~-----~~~~f~~LgLiIiDEeH~fg~- 191 (233)
T d2eyqa3 118 QQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQ-----SDVKFKDLGLLIVDEEHRFGV- 191 (233)
T ss_dssp HHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHH-----SCCCCSSEEEEEEESGGGSCH-
T ss_pred HHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhhhc-----cCCccccccceeeechhhhhh-
Confidence 9999999986 7779999999999886544 55667778999999975552 456789999999999999874
Q ss_pred hHHHHHHhhCCCCCcEEEEEccCCccHH
Q 011963 346 DTLSLIRQSISGKPHTVVFNDCLTYTSV 373 (474)
Q Consensus 346 ~~l~~Il~~l~~~~q~llfSAT~~~~v~ 373 (474)
.+-..+ .....++.++++|||..++..
T Consensus 192 kQ~~~l-~~~~~~~~~l~~SATPiprtl 218 (233)
T d2eyqa3 192 RHKERI-KAMRANVDILTLTATPIPRTL 218 (233)
T ss_dssp HHHHHH-HHHHTTSEEEEEESSCCCHHH
T ss_pred HHHHHH-HhhCCCCCEEEEecchhHHHH
Confidence 222222 233456899999999887543
No 18
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.67 E-value=6.4e-16 Score=142.71 Aligned_cols=154 Identities=12% Similarity=0.054 Sum_probs=112.2
Q ss_pred HHHHHHHHhCCCC-------------ccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhc
Q 011963 184 NAIENAMRHDGVE-------------QDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKE 250 (474)
Q Consensus 184 ~~i~~~l~~~g~~-------------~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~ 250 (474)
+.+.+.++..|+. .+.+++.++||.+++..++.++..++++||| +|||+..+..+ ..
T Consensus 39 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~Lr~yQ~eav~~~~~~~~~ll~~~tG-~GKT~~a~~~~-~~-------- 108 (206)
T d2fz4a1 39 RDIIEYFESNGIEFVDNAADPIPTPYFDAEISLRDYQEKALERWLVDKRGCIVLPTG-SGKTHVAMAAI-NE-------- 108 (206)
T ss_dssp HHHHHHHHHTTCCEEEESCCCCCCCCCCCCCCCCHHHHHHHHHHTTTSEEEEEESSS-TTHHHHHHHHH-HH--------
T ss_pred HHHHHHHHHCCCceeeccccccCCCCCCCCCCcCHHHHHHHHHHHhCCCcEEEeCCC-CCceehHHhHH-HH--------
Confidence 5566777777653 1234778999999999999999999999999 99998764322 11
Q ss_pred CCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCC
Q 011963 251 GFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSG 330 (474)
Q Consensus 251 ~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~ 330 (474)
.+.++|||+|+++|+.|..+.+..+.. ..+....|+.. . ..+|+|+|...+..+...- ..+
T Consensus 109 ----~~~~~Liv~p~~~L~~q~~~~~~~~~~--~~~~~~~~~~~---------~-~~~i~i~t~~~~~~~~~~~---~~~ 169 (206)
T d2fz4a1 109 ----LSTPTLIVVPTLALAEQWKERLGIFGE--EYVGEFSGRIK---------E-LKPLTVSTYDSAYVNAEKL---GNR 169 (206)
T ss_dssp ----SCSCEEEEESSHHHHHHHHHHHGGGCG--GGEEEESSSCB---------C-CCSEEEEEHHHHHHTHHHH---TTT
T ss_pred ----hcCceeEEEcccchHHHHHHHHHhhcc--cchhhcccccc---------c-ccccccceehhhhhhhHhh---CCc
Confidence 134789999999999999999988732 22334444321 2 4679999999887654431 245
Q ss_pred cceEEeccccccCChhHHHHHHhhCCCCCcEEEEEccC
Q 011963 331 VSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368 (474)
Q Consensus 331 l~~lViDEad~ll~~~~l~~Il~~l~~~~q~llfSAT~ 368 (474)
+.+||+||||++. .+.+..++..++ ....++||||+
T Consensus 170 ~~lvIiDEaH~~~-a~~~~~i~~~~~-~~~~lgLTATl 205 (206)
T d2fz4a1 170 FMLLIFDEVHHLP-AESYVQIAQMSI-APFRLGLTATF 205 (206)
T ss_dssp CSEEEEECSSCCC-TTTHHHHHHTCC-CSEEEEEEESC
T ss_pred CCEEEEECCeeCC-cHHHHHHHhccC-CCcEEEEecCC
Confidence 7899999999986 345667777664 34578999997
No 19
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.62 E-value=2.1e-15 Score=143.83 Aligned_cols=165 Identities=12% Similarity=0.072 Sum_probs=125.6
Q ss_pred HhCCCCccccCCCchhhHHHHHHHhc----CC--cEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEec
Q 011963 191 RHDGVEQDNPLFVNSWGIEFWKCYSS----AK--DILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVS 264 (474)
Q Consensus 191 ~~~g~~~ptpi~~~~~Q~~~i~~~l~----g~--dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~P 264 (474)
....| .+|+- |.+|+..+.. ++ +.|+++-|| ||||..|+..++..+.. |-++++++|
T Consensus 78 ~~LPF-eLT~~-----Q~~ai~ei~~d~~~~~~m~rLL~GdvG-SGKT~Va~~a~~~~~~~----------g~q~~~m~P 140 (264)
T d1gm5a3 78 KSLPF-KLTNA-----QKRAHQEIRNDMISEKPMNRLLQGDVG-SGKTVVAQLAILDNYEA----------GFQTAFMVP 140 (264)
T ss_dssp HHSSS-CCCHH-----HHHHHHHHHHHHHSSSCCCCEEECCSS-SSHHHHHHHHHHHHHHH----------TSCEEEECS
T ss_pred hhccc-cCCch-----HHHHHHHHHHHhhccCcceeeeecccc-ccccHHHHHHHHHHHhc----------ccceeEEee
Confidence 34455 36666 9999988853 33 789999999 99999999999877766 569999999
Q ss_pred cHHHHHHHHHHHHhc-ccCCcEEEEEecCCCHHH---HHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEecccc
Q 011963 265 SQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDH---QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD 340 (474)
Q Consensus 265 treLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~~~---q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad 340 (474)
|..||.|.+..+..+ ..+|+.+..++|+.+..+ .+..+.+|.++|||||---|. ..+.+.+|.++||||-|
T Consensus 141 t~~La~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~-----~~~~f~~LglviiDEqH 215 (264)
T d1gm5a3 141 TSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQ-----EDVHFKNLGLVIIDEQH 215 (264)
T ss_dssp CHHHHHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHH-----HCCCCSCCCEEEEESCC
T ss_pred hHhhhHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhc-----CCCCccccceeeecccc
Confidence 999999999999996 777999999999988654 355667778999999975442 34567899999999999
Q ss_pred ccCC--hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCC
Q 011963 341 SLSK--GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGS 383 (474)
Q Consensus 341 ~ll~--~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p 383 (474)
+..- +.. +..-..+++++++|||..+. .++....++-
T Consensus 216 ~fgv~Qr~~----l~~~~~~~~~l~~SATPipr--tl~~~~~g~~ 254 (264)
T d1gm5a3 216 RFGVKQREA----LMNKGKMVDTLVMSATPIPR--SMALAFYGDL 254 (264)
T ss_dssp CC-----CC----CCSSSSCCCEEEEESSCCCH--HHHHHHTCCS
T ss_pred ccchhhHHH----HHHhCcCCCEEEEECCCCHH--HHHHHHcCCC
Confidence 9975 221 12224568999999997764 4444455543
No 20
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.52 E-value=1.2e-14 Score=124.64 Aligned_cols=124 Identities=11% Similarity=-0.004 Sum_probs=85.9
Q ss_pred CcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHH
Q 011963 218 KDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDH 297 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~ 297 (474)
+..++.|||| ||||+.+.. + +.. .+.++||++||++|+.|+++.+...-. ......+++....
T Consensus 9 ~~~ll~apTG-sGKT~~~~~--~--~~~---------~~~~vli~~P~~~l~~q~~~~~~~~~~--~~~~~~~~~~~~~- 71 (136)
T d1a1va1 9 QVAHLHAPTG-SGKSTKVPA--A--YAA---------QGYKVLVLNPSVAATLGFGAYMSKAHG--VDPNIRTGVRTIT- 71 (136)
T ss_dssp EEEEEECCTT-SCTTTHHHH--H--HHT---------TTCCEEEEESCHHHHHHHHHHHHHHHS--CCCEEECSSCEEC-
T ss_pred CEEEEEeCCC-CCHHHHHHH--H--HHH---------cCCcEEEEcChHHHHHHHHHHHHHHhh--ccccccccccccc-
Confidence 4679999999 999975422 2 111 366899999999999999998887622 2223334442211
Q ss_pred HHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC--hhHHHHHHhhCC--CCCcEEEEEccC
Q 011963 298 QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK--GDTLSLIRQSIS--GKPHTVVFNDCL 368 (474)
Q Consensus 298 q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~--~~~l~~Il~~l~--~~~q~llfSAT~ 368 (474)
. ...++++|.+.+... ....+.+++++||||+|++-. ...+..++..+. .+.+++++|||.
T Consensus 72 ------~-~~~~~~~~~~~~~~~---~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~l~~~~~~~~~~~l~~TATP 136 (136)
T d1a1va1 72 ------T-GSPITYSTYGKFLAD---GGCSGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLATATP 136 (136)
T ss_dssp ------C-CCSEEEEEHHHHHHT---TGGGGCCCSEEEEETTTCCSHHHHHHHHHHHHHTTTTTCSEEEEEESSC
T ss_pred ------c-ccceEEEeeeeeccc---cchhhhcCCEEEEecccccCHHHHHHHHHHHHHHHHCCCCcEEEEeCCC
Confidence 1 357999999876543 344578899999999998754 344666676664 456789999983
No 21
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=98.97 E-value=7.2e-09 Score=99.79 Aligned_cols=159 Identities=9% Similarity=0.005 Sum_probs=101.5
Q ss_pred chhhHHHHHHHh---------cCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHH
Q 011963 204 NSWGIEFWKCYS---------SAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRS 274 (474)
Q Consensus 204 ~~~Q~~~i~~~l---------~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~ 274 (474)
.+||.+++..+. .+...|++-..| .|||+..+ .++..+........ .....+|||+|.. |+.|..+
T Consensus 57 r~hQ~~gv~~l~~~~~~~~~~~~~g~iLaDemG-lGKT~qai-a~l~~l~~~~~~~~--~~~~~~LIV~P~s-l~~qW~~ 131 (298)
T d1z3ix2 57 RPHQREGVKFLWDCVTGRRIENSYGCIMADEMG-LGKTLQCI-TLIWTLLKQSPDCK--PEIDKVIVVSPSS-LVRNWYN 131 (298)
T ss_dssp CHHHHHHHHHHHHHHTTSSSTTCCEEEECCCTT-SCHHHHHH-HHHHHHHHCCTTSS--CSCSCEEEEECHH-HHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhhhccCCceEEEeCCC-CCHHHHHH-HHHHHHHHhccccc--CCCCcEEEEccch-hhHHHHH
Confidence 456999998763 244688888999 99997643 34444444321111 1234689999975 8899999
Q ss_pred HHHhcccCCcEEEEEecCCCHHHHH---HHHhc----CCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC-hh
Q 011963 275 VCKPLKAFGIHTVSLHPGAAIDHQI---TGLRS----CEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK-GD 346 (474)
Q Consensus 275 ~~~~l~~~~i~v~~~~gg~~~~~q~---~~l~~----~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~-~~ 346 (474)
++..+......++.++|+....... ..+.. ...+++|+|.+.+..... .+.--+..++|+||+|++-. ..
T Consensus 132 Ei~k~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~sy~~~~~~~~--~l~~~~~~~vI~DEaH~ikn~~s 209 (298)
T d1z3ix2 132 EVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAE--VLHKGKVGLVICDEGHRLKNSDN 209 (298)
T ss_dssp HHHHHHGGGCCEEEECSSCHHHHHHHHHHHHCCCSSCCSCCEEEEEHHHHHHHTT--TTTTSCCCEEEETTGGGCCTTCH
T ss_pred HHHhhcCCceeEEEEeCchHHHHHHHHHHhhhccCccccceEEEEeecccccchh--cccccceeeeecccccccccccc
Confidence 9998755556666777765433221 11211 135799999888765432 22223467899999999987 33
Q ss_pred HHHHHHhhCCCCCcEEEEEccCCc
Q 011963 347 TLSLIRQSISGKPHTVVFNDCLTY 370 (474)
Q Consensus 347 ~l~~Il~~l~~~~q~llfSAT~~~ 370 (474)
.....+..+. ....+++|||.-.
T Consensus 210 ~~~~a~~~l~-~~~rllLTGTPi~ 232 (298)
T d1z3ix2 210 QTYLALNSMN-AQRRVLISGTPIQ 232 (298)
T ss_dssp HHHHHHHHHC-CSEEEEECSSCSG
T ss_pred hhhhhhhccc-cceeeeecchHHh
Confidence 3333334443 3567999999744
No 22
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.55 E-value=1e-07 Score=87.88 Aligned_cols=152 Identities=10% Similarity=0.054 Sum_probs=96.3
Q ss_pred CchhhHHHHHHHh----cCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHh
Q 011963 203 VNSWGIEFWKCYS----SAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKP 278 (474)
Q Consensus 203 ~~~~Q~~~i~~~l----~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~ 278 (474)
..+||.+++..+. .+..+|++-++| .|||+..+ .++..+.... ....+|||+| ..+..|..+++..
T Consensus 13 L~~yQ~~~v~~~~~~~~~~~g~iLaDe~G-lGKT~~~i-~~~~~~~~~~-------~~~~~LIv~p-~~l~~~W~~e~~~ 82 (230)
T d1z63a1 13 LRPYQIKGFSWMRFMNKLGFGICLADDMG-LGKTLQTI-AVFSDAKKEN-------ELTPSLVICP-LSVLKNWEEELSK 82 (230)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCEEECCCTT-SCHHHHHH-HHHHHHHHTT-------CCSSEEEEEC-STTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhhcCCCEEEEeCCC-CChHHHHH-Hhhhhhhhcc-------cccccceecc-hhhhhHHHHHHHh
Confidence 4678999997653 345789999999 99999764 3444444321 2346899998 5677888888888
Q ss_pred cccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC-hhHHHHHHhhCCC
Q 011963 279 LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK-GDTLSLIRQSISG 357 (474)
Q Consensus 279 l~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~-~~~l~~Il~~l~~ 357 (474)
+.. ...+....+..... .. ...+|+|+|.+.+........+ ...++|+||||.+-. .......+..+.
T Consensus 83 ~~~-~~~~~~~~~~~~~~----~~--~~~~vvi~~~~~~~~~~~l~~~---~~~~vI~DEah~~k~~~s~~~~~~~~l~- 151 (230)
T d1z63a1 83 FAP-HLRFAVFHEDRSKI----KL--EDYDIILTTYAVLLRDTRLKEV---EWKYIVIDEAQNIKNPQTKIFKAVKELK- 151 (230)
T ss_dssp HCT-TSCEEECSSSTTSC----CG--GGSSEEEEEHHHHTTCHHHHTC---CEEEEEEETGGGGSCTTSHHHHHHHTSC-
T ss_pred hcc-cccceeeccccchh----hc--cCcCEEEeeHHHHHhHHHHhcc---cceEEEEEhhhcccccchhhhhhhhhhc-
Confidence 733 33443333322111 11 1479999999887543221111 346799999999987 443444444444
Q ss_pred CCcEEEEEccCCcc-HHHH
Q 011963 358 KPHTVVFNDCLTYT-SVPA 375 (474)
Q Consensus 358 ~~q~llfSAT~~~~-v~~l 375 (474)
....+++|||.-.. ..++
T Consensus 152 a~~r~~LTgTPi~n~~~dl 170 (230)
T d1z63a1 152 SKYRIALTGTPIENKVDDL 170 (230)
T ss_dssp EEEEEEECSSCSTTCHHHH
T ss_pred cceEEEEecchHHhHHHHH
Confidence 24578999997544 5554
No 23
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=98.52 E-value=1.1e-06 Score=81.80 Aligned_cols=161 Identities=8% Similarity=0.004 Sum_probs=119.7
Q ss_pred CCCccccCCCchhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHH
Q 011963 194 GVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273 (474)
Q Consensus 194 g~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~ 273 (474)
|. +|+++ |...--.+..|+ |+.+.|| -||||+..+|+.-..+. |-.+-||+..--||..=.
T Consensus 78 G~-RhyDV-----QLiGgi~L~~G~--iaem~TG-EGKTL~a~l~a~l~al~----------g~~vhvvTvNdyLA~RDa 138 (273)
T d1tf5a3 78 GM-FPFKV-----QLMGGVALHDGN--IAEMKTG-EGKTLTSTLPVYLNALT----------GKGVHVVTVNEYLASRDA 138 (273)
T ss_dssp SC-CCCHH-----HHHHHHHHHTTS--EEECCTT-SCHHHHHHHHHHHHHTT----------SSCEEEEESSHHHHHHHH
T ss_pred ce-EEehh-----HHHHHHHHHhhh--heeecCC-CcchhHHHHHHHHHHhc----------CCCceEEecCccccchhh
Confidence 44 45555 777777777775 8899999 99999999999855544 557889999999999988
Q ss_pred HHHHhc-ccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHH-HHHHcC------CCCCCCcceEEeccccccC-C
Q 011963 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL-KLVSLK------AIDVSGVSLLVVDRLDSLS-K 344 (474)
Q Consensus 274 ~~~~~l-~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~-~ll~~~------~~~l~~l~~lViDEad~ll-~ 344 (474)
.++..+ ..+|+.|.++..+.+........ .+||+.+|..-+- |+|+.+ ......+.+.||||+|.|+ |
T Consensus 139 e~m~~iy~~lGlsvg~~~~~~~~~~r~~~Y---~~di~Ygt~~e~~fDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiliD 215 (273)
T d1tf5a3 139 EQMGKIFEFLGLTVGLNLNSMSKDEKREAY---AADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILID 215 (273)
T ss_dssp HHHHHHHHHTTCCEEECCTTSCHHHHHHHH---HSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEEETHHHHHTT
T ss_pred hHHhHHHHHcCCCccccccccCHHHHHHHh---hCCceecchhhhhhhhcchhhhcChhhhccCCCCEEEEEcchhhhhh
Confidence 999987 77799999999888876654444 3699999998774 555442 2235679999999999886 3
Q ss_pred ----------------hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHh
Q 011963 345 ----------------GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL 379 (474)
Q Consensus 345 ----------------~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~ 379 (474)
.-.+..+++.. .++.+++.|.-.+..++...|
T Consensus 216 eartpliisg~~~~~a~it~q~~f~~y---~~l~gmtgta~~~~~e~~~iy 263 (273)
T d1tf5a3 216 EARTPLIISGQSMTLATITFQNYFRMY---EKLAGMTGTAKTEEEEFRNIY 263 (273)
T ss_dssp TTTCEEEEEEEEEEEEEEEHHHHHTTS---SEEEEEESCCGGGHHHHHHHH
T ss_pred ccCCceEeccCccchhhhhHHHHHHHH---HHHhCCccccHHHHHHHHhcc
Confidence 11234455444 467888888877666665555
No 24
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.44 E-value=2e-07 Score=82.02 Aligned_cols=73 Identities=12% Similarity=0.115 Sum_probs=62.5
Q ss_pred ccccCCcEEEEEEcCCchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc--------chHH
Q 011963 394 ASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSN 465 (474)
Q Consensus 394 ~~~~~~i~q~~~~~~~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~ 465 (474)
..+..+|.|+|+.|+++..|+..|.++|... . ..++||||+++..|+.++..|...|+++. .+|.
T Consensus 2 ~~tl~~i~q~~v~v~~~~~K~~~L~~ll~~~----~---~~k~iiF~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~ 74 (168)
T d2j0sa2 2 ELTLEGIKQFFVAVEREEWKFDTLCDLYDTL----T---ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERE 74 (168)
T ss_dssp GCSCTTEEEEEEEESSTTHHHHHHHHHHHHH----T---SSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSCHHHHH
T ss_pred CCCCCCcEEEEEEecChHHHHHHHHHHHHhC----C---CCceEEEeeeHHHHHHHHHHhhhcccchhhhhhhhhHHHHH
Confidence 3567899999999998788997766666554 3 67999999999999999999999999987 6788
Q ss_pred HHHHHhhc
Q 011963 466 CIVSHIKN 473 (474)
Q Consensus 466 ~~i~~Fk~ 473 (474)
.+++.|++
T Consensus 75 ~~~~~fk~ 82 (168)
T d2j0sa2 75 SIMKEFRS 82 (168)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 89999985
No 25
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.42 E-value=2.5e-07 Score=81.29 Aligned_cols=71 Identities=15% Similarity=0.194 Sum_probs=60.3
Q ss_pred ccCCcEEEEEEcCCchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc--------chHHHH
Q 011963 396 QSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSNCI 467 (474)
Q Consensus 396 ~~~~i~q~~~~~~~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~~~ 467 (474)
+..+|.|+|+.|++..+|+. .|..+++... .+++||||+++..++.|+..|...|+++. .+|..+
T Consensus 2 tl~~ikq~y~~~~~~~~K~~----~L~~ll~~~~---~~~~lIF~~~~~~~~~l~~~l~~~~~~~~~~hg~~~~~~R~~~ 74 (168)
T d2rb4a1 2 TLNNIRQYYVLCEHRKDKYQ----ALCNIYGSIT---IGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASI 74 (168)
T ss_dssp CBCCEEEEEEECSSHHHHHH----HHHHHHTTSC---CSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHH
T ss_pred CccccEEEEEEeCCHHHHHH----HHHHHHHhCC---CCcEEEEcCHHHHHHHHHHHHHhcCCcceecccchhhHHHHHH
Confidence 56789999999987777884 4555555555 78999999999999999999999999987 778899
Q ss_pred HHHhhc
Q 011963 468 VSHIKN 473 (474)
Q Consensus 468 i~~Fk~ 473 (474)
+++|++
T Consensus 75 ~~~F~~ 80 (168)
T d2rb4a1 75 IQRFRD 80 (168)
T ss_dssp HHHHHT
T ss_pred hhhhcC
Confidence 999975
No 26
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.39 E-value=2.8e-06 Score=79.41 Aligned_cols=154 Identities=8% Similarity=0.027 Sum_probs=113.2
Q ss_pred hHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc-ccCCcE
Q 011963 207 GIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIH 285 (474)
Q Consensus 207 Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l-~~~~i~ 285 (474)
|.-.--.+..| -|+.+.|| -||||+..+|+.-..+. |-.+-||+..-.||..=..++..+ ..+|+.
T Consensus 102 QLiGgi~l~~g--~iaem~TG-EGKTL~a~l~a~l~al~----------g~~vhvvTvNdyLA~RDa~~m~~~y~~lGls 168 (288)
T d1nkta3 102 QVMGAAALHLG--NVAEMKTG-EGKTLTCVLPAYLNALA----------GNGVHIVTVNDYLAKRDSEWMGRVHRFLGLQ 168 (288)
T ss_dssp HHHHHHHHHTT--EEEECCTT-SCHHHHTHHHHHHHHTT----------TSCEEEEESSHHHHHHHHHHHHHHHHHTTCC
T ss_pred hhHHHHHHhhh--hhhcccCC-CchhHHHHHHHHHHHhc----------CCCeEEEecCchhhhhhHHHHHHHHHHhCCC
Confidence 66665555544 58899999 99999999999855554 557889999999999988999887 777999
Q ss_pred EEEEecCCCHHHHHHHHhcCCCcEEEEChHHHH-HHHHcCC------CCCCCcceEEeccccccC-C-------------
Q 011963 286 TVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL-KLVSLKA------IDVSGVSLLVVDRLDSLS-K------------- 344 (474)
Q Consensus 286 v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~-~ll~~~~------~~l~~l~~lViDEad~ll-~------------- 344 (474)
|+++..+.+........ .+||+.+|...+- |+|+.+- .-...+.|.||||+|.|| |
T Consensus 169 vg~~~~~~~~~~~~~~Y---~~di~Y~t~~e~gfDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiLiDeartpLiis~~~~ 245 (288)
T d1nkta3 169 VGVILATMTPDERRVAY---NADITYGTNNEFGFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSILIDEARTPLIISNQTL 245 (288)
T ss_dssp EEECCTTCCHHHHHHHH---HSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEETTHHHHHTTGGGSCEEEEEEEE
T ss_pred cCcccccCChHHHHHHh---hcccccccHHHHhhhhhhhhhccChhhhcccCCcEEEEEcccccccccccCceEeccCCc
Confidence 99999998876654433 4699999998874 4554422 235678999999999886 3
Q ss_pred -hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHh
Q 011963 345 -GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL 379 (474)
Q Consensus 345 -~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~ 379 (474)
.-.+...++.. .++..++.|...+..++...|
T Consensus 246 a~it~qn~fr~y---~kl~gmtgta~te~~E~~~iy 278 (288)
T d1nkta3 246 ATITLQNYFRLY---DKLAGMTGTAQTEAAELHEIY 278 (288)
T ss_dssp EEECHHHHHTTS---SEEEEEESCCGGGHHHHHHHH
T ss_pred chhhHHHHHHHH---HHHhCCcccHHHHHHHHHHHh
Confidence 12233344333 356777777777667666655
No 27
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.35 E-value=4.1e-07 Score=80.02 Aligned_cols=70 Identities=11% Similarity=0.111 Sum_probs=59.0
Q ss_pred ccCCcEEEEEEcCCchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc--------chHHHH
Q 011963 396 QSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSNCI 467 (474)
Q Consensus 396 ~~~~i~q~~~~~~~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~~~ 467 (474)
+..+|.|+|+.|+ ..+|...|..+| .... ..++||||+|+..|+.|+..|...|+.+. .+|+.+
T Consensus 3 tl~~i~q~yi~v~-~~~K~~~L~~ll----~~~~---~~k~iVF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~ 74 (171)
T d1s2ma2 3 TLKGITQYYAFVE-ERQKLHCLNTLF----SKLQ---INQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKV 74 (171)
T ss_dssp BCTTEEEEEEECC-GGGHHHHHHHHH----HHSC---CSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHH
T ss_pred CccceEEEEEEcC-HHHHHHHHHHHH----HhCC---CCceEEEEeeeehhhHhHHhhhcccccccccccccchhhhhhh
Confidence 5678999999997 577995555555 4455 78999999999999999999999999987 678889
Q ss_pred HHHhhc
Q 011963 468 VSHIKN 473 (474)
Q Consensus 468 i~~Fk~ 473 (474)
+.+|++
T Consensus 75 ~~~f~~ 80 (171)
T d1s2ma2 75 FHEFRQ 80 (171)
T ss_dssp HHHHHT
T ss_pred hhhccc
Confidence 999985
No 28
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=98.34 E-value=3.2e-07 Score=79.35 Aligned_cols=67 Identities=18% Similarity=0.193 Sum_probs=55.9
Q ss_pred CCcEEEEEEcCCchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc--------chHHHHHH
Q 011963 398 ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSNCIVS 469 (474)
Q Consensus 398 ~~i~q~~~~~~~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~~~i~ 469 (474)
.+|+|.|+.|+ ..+|+..|..+| +.. ..++||||+|+..|+.|+..|+..|+.+. .+|..+++
T Consensus 2 ~nI~~~~i~v~-~~~K~~~L~~ll----~~~----~~k~IIF~~s~~~~~~l~~~L~~~g~~~~~~~~~~~~~~r~~~~~ 72 (155)
T d1hv8a2 2 ANIEQSYVEVN-ENERFEALCRLL----KNK----EFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIR 72 (155)
T ss_dssp SSSEEEEEECC-GGGHHHHHHHHH----CST----TCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSCHHHHHHHHH
T ss_pred CCeEEEEEEeC-hHHHHHHHHHHH----ccC----CCCEEEEECchHHHHHHHhhhcccccccccccccchhhhhhhhhh
Confidence 58999999997 578996555544 432 56899999999999999999999999986 57888999
Q ss_pred Hhhc
Q 011963 470 HIKN 473 (474)
Q Consensus 470 ~Fk~ 473 (474)
+|++
T Consensus 73 ~f~~ 76 (155)
T d1hv8a2 73 LFKQ 76 (155)
T ss_dssp HHHT
T ss_pred hhhc
Confidence 9975
No 29
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.31 E-value=6.1e-07 Score=78.27 Aligned_cols=67 Identities=15% Similarity=0.174 Sum_probs=56.3
Q ss_pred cEEEEEEcCCchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc--------chHHHHHHHh
Q 011963 400 IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSNCIVSHI 471 (474)
Q Consensus 400 i~q~~~~~~~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~~~i~~F 471 (474)
|+|+|+.|.+.+.|+..|..++. ... ..++||||+|+..|+.|+..|...|+++. .+|..+++.|
T Consensus 1 I~q~~~~v~~~e~K~~~L~~ll~----~~~---~~k~iIF~~s~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~l~~f 73 (162)
T d1fuka_ 1 IKQFYVNVEEEEYKYECLTDLYD----SIS---VTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEF 73 (162)
T ss_dssp CEEEEEEEESGGGHHHHHHHHHH----HTT---CSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHH----hCC---CCcEEEEEEEEchHHHHHHHHhhcCceEEEeccCCchhhHHHHHHHH
Confidence 68999999877779955555554 444 78999999999999999999999999987 7788889999
Q ss_pred hc
Q 011963 472 KN 473 (474)
Q Consensus 472 k~ 473 (474)
++
T Consensus 74 ~~ 75 (162)
T d1fuka_ 74 RS 75 (162)
T ss_dssp HT
T ss_pred hh
Confidence 75
No 30
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.22 E-value=1.4e-06 Score=76.25 Aligned_cols=67 Identities=18% Similarity=0.055 Sum_probs=56.4
Q ss_pred CcEEEEEEcCCchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc--------chHHHHHHH
Q 011963 399 CIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSNCIVSH 470 (474)
Q Consensus 399 ~i~q~~~~~~~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~~~i~~ 470 (474)
+|.|+|+.|. .++|+..|.++|.. .. ..++||||+++..++.|+..|...|++|. .+|..++++
T Consensus 1 ~l~q~~v~~~-~~~K~~~L~~ll~~----~~---~~k~iIF~~~~~~~~~l~~~L~~~~~~~~~ihg~~~~~~r~~~l~~ 72 (168)
T d1t5ia_ 1 GLQQYYVKLK-DNEKNRKLFDLLDV----LE---FNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQ 72 (168)
T ss_dssp CCEEEEEECC-GGGHHHHHHHHHHH----SC---CSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHH
T ss_pred CcEEEEEEeC-hHHHHHHHHHHHHh----CC---CCeEEEEEeeeecchhhhhhhccccccccccccccchhhhhhhhhh
Confidence 4789999997 67899666665544 34 67999999999999999999999999986 678889999
Q ss_pred hhc
Q 011963 471 IKN 473 (474)
Q Consensus 471 Fk~ 473 (474)
|++
T Consensus 73 F~~ 75 (168)
T d1t5ia_ 73 FKD 75 (168)
T ss_dssp HHT
T ss_pred hcc
Confidence 975
No 31
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=97.77 E-value=3e-05 Score=75.93 Aligned_cols=142 Identities=11% Similarity=0.105 Sum_probs=85.6
Q ss_pred chhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc-ccC
Q 011963 204 NSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAF 282 (474)
Q Consensus 204 ~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l-~~~ 282 (474)
.+||..|+..++.++=++++.|.| ||||... .-++..+..... ..+.++++++||.-=|..+...+... ...
T Consensus 150 ~~~Q~~A~~~al~~~~~vI~G~pG-TGKTt~i-~~~l~~l~~~~~-----~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~ 222 (359)
T d1w36d1 150 INWQKVAAAVALTRRISVISGGPG-TGKTTTV-AKLLAALIQMAD-----GERCRIRLAAPTGKAAARLTESLGKALRQL 222 (359)
T ss_dssp CCHHHHHHHHHHTBSEEEEECCTT-STHHHHH-HHHHHHHHHTCS-----SCCCCEEEEBSSHHHHHHHHHHHTHHHHHS
T ss_pred ccHHHHHHHHHHcCCeEEEEcCCC-CCceehH-HHHHHHHHHHHh-----ccCCeEEEecCcHHHHHHHHHHHHHHHhhc
Confidence 478999999999999999999999 9999763 334444443211 14678999999998888877665443 111
Q ss_pred CcEEEE---E-ecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCChhHHHHHHhhCCCC
Q 011963 283 GIHTVS---L-HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGK 358 (474)
Q Consensus 283 ~i~v~~---~-~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~~~~l~~Il~~l~~~ 358 (474)
+..... . ...... ..++-.+++. ..+.....+.-..++||||||-.+ +...+..++..++..
T Consensus 223 ~~~~~~~~~~~~~~~t~-----------~~ll~~~~~~--~~~~~~~~~~l~~d~lIIDEaSmv-~~~l~~~ll~~~~~~ 288 (359)
T d1w36d1 223 PLTDEQKKRIPEDASTL-----------HRLLGAQPGS--QRLRHHAGNPLHLDVLVVDEASMI-DLPMMSRLIDALPDH 288 (359)
T ss_dssp SCCSCCCCSCSCCCBTT-----------TSCC-------------CTTSCCSCSEEEECSGGGC-BHHHHHHHHHTCCTT
T ss_pred CchhhhhhhhhhhhhHH-----------HHHHhhhhcc--hHHHHhhhcccccceeeehhhhcc-CHHHHHHHHHHhcCC
Confidence 110000 0 000000 0011111111 111223334556889999999654 477788999999988
Q ss_pred CcEEEEEc
Q 011963 359 PHTVVFND 366 (474)
Q Consensus 359 ~q~llfSA 366 (474)
.++|++--
T Consensus 289 ~~lILvGD 296 (359)
T d1w36d1 289 ARVIFLGD 296 (359)
T ss_dssp CEEEEEEC
T ss_pred CEEEEECC
Confidence 88888753
No 32
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=97.45 E-value=0.00012 Score=63.90 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=38.5
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCccc--------chHHHHHHHhhc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSNCIVSHIKN 473 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~~~i~~Fk~ 473 (474)
+.++||||+|+..|+.|+..|...||++. .+|+.++++|++
T Consensus 31 g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR~~~l~~F~~ 79 (174)
T d1c4oa2 31 GERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRL 79 (174)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHT
T ss_pred CCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHHHHHHHHHHC
Confidence 56999999999999999999999999987 789999999986
No 33
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=97.24 E-value=0.00036 Score=62.20 Aligned_cols=67 Identities=9% Similarity=0.080 Sum_probs=50.6
Q ss_pred cCCcEEEEEEcCCchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc--------chHHHHH
Q 011963 397 SACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSNCIV 468 (474)
Q Consensus 397 ~~~i~q~~~~~~~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~~~i 468 (474)
.+||.+.+ ++ ..+|+..|+.+|. .+. ..++||||+|+..|+.|+..|...|+.+. .+|..++
T Consensus 4 RpNi~y~v--~~-~~~k~~~L~~~l~----~~~---~~~~IIF~~t~~~~~~l~~~l~~~~~~~~~~h~~~~~~~r~~~~ 73 (200)
T d1oywa3 4 RPNIRYML--ME-KFKPLDQLMRYVQ----EQR---GKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQ 73 (200)
T ss_dssp CTTEEEEE--EE-CSSHHHHHHHHHH----HTT---TCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHH
T ss_pred CCCcEEEE--Ec-CCcHHHHHHHHHH----hcC---CCCEEEEEeeehhhHHhhhhhccCCceeEEecCCCcHHHHHHHH
Confidence 35665443 33 3458755555544 444 67999999999999999999999999987 5688899
Q ss_pred HHhhc
Q 011963 469 SHIKN 473 (474)
Q Consensus 469 ~~Fk~ 473 (474)
++|++
T Consensus 74 ~~f~~ 78 (200)
T d1oywa3 74 EKFQR 78 (200)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99975
No 34
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=97.08 E-value=0.00044 Score=60.65 Aligned_cols=41 Identities=15% Similarity=0.133 Sum_probs=38.2
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCccc--------chHHHHHHHhhc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSNCIVSHIKN 473 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~~~i~~Fk~ 473 (474)
+.++||||+++..++.++..|+..|+++. .+|..++++||+
T Consensus 31 ~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~eR~~~l~~Fr~ 79 (181)
T d1t5la2 31 NERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRL 79 (181)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHH
T ss_pred CCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHHHHHHHHHHHC
Confidence 46999999999999999999999999987 679999999986
No 35
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=96.90 E-value=0.0084 Score=51.74 Aligned_cols=110 Identities=19% Similarity=0.161 Sum_probs=78.3
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHH---HHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQ---ITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q---~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
+-++||.|+|+.-|..+...+... |+++..++|+++..+. ...+.++..+|||+|. +-..++|+.+++
T Consensus 31 g~r~lvfc~t~~~~~~l~~~L~~~---Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~------v~~~GiDip~V~ 101 (174)
T d1c4oa2 31 GERTLVTVLTVRMAEELTSFLVEH---GIRARYLHHELDAFKRQALIRDLRLGHYDCLVGIN------LLREGLDIPEVS 101 (174)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHHT---TCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESC------CCCTTCCCTTEE
T ss_pred CCcEEEEEcchhHHHHHHHHHHhc---CCceEEEecccchHHHHHHHHHHHCCCeEEEEeee------eeeeeccCCCCc
Confidence 668999999999999998887765 8999999999986554 4555677899999995 335789999999
Q ss_pred eEEeccccccCC---hhHHHHHHhhCC--CCCcEEEEEccCCccHHH
Q 011963 333 LLVVDRLDSLSK---GDTLSLIRQSIS--GKPHTVVFNDCLTYTSVP 374 (474)
Q Consensus 333 ~lViDEad~ll~---~~~l~~Il~~l~--~~~q~llfSAT~~~~v~~ 374 (474)
++|+=.++...- ...+-..+.... .+...++|....+..+..
T Consensus 102 ~Vi~~~~~~~~~~~~~~~~iq~~GR~gR~~~g~~~~~~~~~~~~~~~ 148 (174)
T d1c4oa2 102 LVAILDADKEGFLRSERSLIQTIGRAARNARGEVWLYADRVSEAMQR 148 (174)
T ss_dssp EEEETTTTSCSGGGSHHHHHHHHGGGTTSTTCEEEEECSSCCHHHHH
T ss_pred EEEEeccccccccchhHHHHHHhhhhhhcCCCeeEEeecCCCHHHHH
Confidence 999988876543 233333333332 334455554444443443
No 36
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=96.75 E-value=0.0011 Score=61.83 Aligned_cols=67 Identities=9% Similarity=-0.048 Sum_probs=48.1
Q ss_pred chhhHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc
Q 011963 204 NSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL 279 (474)
Q Consensus 204 ~~~Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l 279 (474)
++-|.+++.. ....++|.|+.| ||||.+.+--+. .+...... +.-++|||++|+.+|..+...+..+
T Consensus 3 ~~eQ~~av~~--~~~~~lI~g~aG-TGKTt~l~~rv~-~ll~~~~~-----~~~~ILvlt~tn~a~~~i~~~~~~~ 69 (306)
T d1uaaa1 3 NPGQQQAVEF--VTGPCLVLAGAG-SGKTRVITNKIA-HLIRGCGY-----QARHIAAVTFTNKAAREMKERVGQT 69 (306)
T ss_dssp CHHHHHHHHC--CSSEEEECCCTT-SCHHHHHHHHHH-HHHHHHCC-----CGGGEEEEESSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhC--CCCCEEEEeeCC-ccHHHHHHHHHH-HHHHhcCC-----ChhHEEEEeCcHHHHHHHHHHHHHh
Confidence 3449999964 345799999999 999977543333 33332211 2347999999999999998888775
No 37
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=96.36 E-value=0.0024 Score=59.50 Aligned_cols=60 Identities=12% Similarity=0.142 Sum_probs=51.8
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc----------------chHHHHHHHhhc
Q 011963 411 EEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS----------------TGSNCIVSHIKN 473 (474)
Q Consensus 411 ~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~----------------~~r~~~i~~Fk~ 473 (474)
..|+..|.++|..++..+. ..++||||+++..|+.++..|...|+++. .++..+++.|++
T Consensus 142 ~pK~~~l~~~l~~~~~~~~---~~k~iiF~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~ 217 (286)
T d1wp9a2 142 HPKMDKLKEIIREQLQRKQ---NSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFAR 217 (286)
T ss_dssp CHHHHHHHHHHHHHHHHCT---TCCEEEECSCHHHHHHHHHHHHHTTCCEEEECCSSCC-------CCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhCC---CCcEEEEeCcHHhHHHHHHHHHHcCCceEEeeccccccccchhchHHHHHHHHHHHc
Confidence 3588888889988887776 78999999999999999999999999876 257788999985
No 38
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=96.28 E-value=0.04 Score=47.59 Aligned_cols=79 Identities=22% Similarity=0.232 Sum_probs=65.5
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHH---HHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQI---TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~---~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
+.++||.++|++-+..+...+... |+.+..++|+++..+.. ..++++.++|||||. +-..++|+.+|.
T Consensus 31 ~~~~iif~~~~~~~~~~~~~l~~~---g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTd------v~~rGiDip~v~ 101 (181)
T d1t5la2 31 NERTLVTTLTKKMAEDLTDYLKEA---GIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGIN------LLREGLDIPEVS 101 (181)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHTT---TCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEESC------CCSSSCCCTTEE
T ss_pred CCeEEEEeehhhhhHHHHHHHHhC---CcceeEecCCccHHHHHHHHHHHHCCCCCEEEehh------HHHccCCCCCCC
Confidence 558999999999998888877655 89999999999976554 455677899999995 335789999999
Q ss_pred eEEeccccccC
Q 011963 333 LLVVDRLDSLS 343 (474)
Q Consensus 333 ~lViDEad~ll 343 (474)
++|.-.++...
T Consensus 102 ~VI~~d~p~~~ 112 (181)
T d1t5la2 102 LVAILDADKEG 112 (181)
T ss_dssp EEEETTTTSCS
T ss_pred EEEEecCCccc
Confidence 99999988754
No 39
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=96.27 E-value=0.0045 Score=58.00 Aligned_cols=64 Identities=16% Similarity=0.082 Sum_probs=46.5
Q ss_pred hHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc
Q 011963 207 GIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL 279 (474)
Q Consensus 207 Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l 279 (474)
|.++|.. .+..++|.|+.| ||||.+.+--+. .++..... ..-++|++++|+..|..+...+...
T Consensus 16 Q~~~v~~--~~g~~lV~g~aG-SGKTt~l~~ri~-~ll~~~~~-----~p~~il~lt~t~~aa~~~~~~~~~~ 79 (318)
T d1pjra1 16 QQEAVRT--TEGPLLIMAGAG-SGKTRVLTHRIA-YLMAEKHV-----APWNILAITFTNKAAREMRERVQSL 79 (318)
T ss_dssp HHHHHHC--CSSCEEEEECTT-SCHHHHHHHHHH-HHHHTTCC-----CGGGEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHhC--CCCCEEEEecCC-ccHHHHHHHHHH-HHHHcCCC-----CHHHeEeEeccHHHHHHHHHHHHhh
Confidence 9999974 356799999999 999976644333 33332111 2337999999999999999888764
No 40
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=96.05 E-value=0.00039 Score=58.20 Aligned_cols=40 Identities=20% Similarity=0.081 Sum_probs=32.4
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCccc-chHHHHHHHhh
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSIS-TGSNCIVSHIK 472 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~v~-~~r~~~i~~Fk 472 (474)
.+++||||+|+..|+.|+..|+..|+++. .++....++|+
T Consensus 35 ~~k~IVFc~t~~~ae~la~~L~~~G~~~~~~H~~~~~~~~~ 75 (138)
T d1jr6a_ 35 GGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIP 75 (138)
T ss_dssp TSCEEEECSCHHHHHHHHHHHHHHTCEEEEECTTCCSCCCT
T ss_pred CCCEEEEeCcHHHHHHHHHHHhccccchhhhhccchhhhhh
Confidence 67999999999999999999999999986 44444444443
No 41
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=96.00 E-value=0.013 Score=51.93 Aligned_cols=94 Identities=16% Similarity=0.188 Sum_probs=73.9
Q ss_pred CCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHH---HHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCc
Q 011963 255 TGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQ---ITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGV 331 (474)
Q Consensus 255 ~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q---~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l 331 (474)
++-++.||+|.-+-+..++..+..+- .++++..+||.++..+. ...+.++..+|||||. +-..++|+.+.
T Consensus 30 rGgQvy~V~p~I~~~e~~~~~l~~~~-p~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~Tt------vIEvGiDvpnA 102 (211)
T d2eyqa5 30 RGGQVYYLYNDVENIQKAAERLAELV-PEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTT------IIETGIDIPTA 102 (211)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHHHHC-TTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESS------TTGGGSCCTTE
T ss_pred cCCeEEEEEcCccchhhHHHHHHHhC-CceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEeh------hhhhccCCCCC
Confidence 47799999997766666666655541 27899999999986654 4455666899999996 33467899999
Q ss_pred ceEEeccccccCChhHHHHHHhhCC
Q 011963 332 SLLVVDRLDSLSKGDTLSLIRQSIS 356 (474)
Q Consensus 332 ~~lViDEad~ll~~~~l~~Il~~l~ 356 (474)
.++||..||++. ..+|.++.....
T Consensus 103 ~~iiI~~a~rfG-LaQLhQLRGRVG 126 (211)
T d2eyqa5 103 NTIIIERADHFG-LAQLHQLRGRVG 126 (211)
T ss_dssp EEEEETTTTSSC-HHHHHHHHTTCC
T ss_pred cEEEEecchhcc-ccccccccceee
Confidence 999999999988 888888888775
No 42
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=95.94 E-value=0.013 Score=51.67 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=26.2
Q ss_pred CCCcceEEeccccccCC--hhHHHHHHhhCCCCCcEEEE
Q 011963 328 VSGVSLLVVDRLDSLSK--GDTLSLIRQSISGKPHTVVF 364 (474)
Q Consensus 328 l~~l~~lViDEad~ll~--~~~l~~Il~~l~~~~q~llf 364 (474)
...-+++||||+|.|.. ...+..++..-+.+..+++.
T Consensus 106 ~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~ 144 (207)
T d1a5ta2 106 LGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 (207)
T ss_dssp TSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEE
T ss_pred cCccceEEechhhhhhhhhhHHHHHHHHhhcccceeeee
Confidence 44678999999999997 66666677665555444443
No 43
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.77 E-value=0.037 Score=46.72 Aligned_cols=74 Identities=18% Similarity=0.205 Sum_probs=59.3
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHH---HHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT---GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~---~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
..++||.|.|+.-+.++...+... ++.+..++|+.+...... .+..+.+.|||+|- +-..++++.++.
T Consensus 27 ~~k~iIF~~s~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~r~~~l~~f~~~~~~iLv~Td------v~~rGiDi~~v~ 97 (162)
T d1fuka_ 27 VTQAVIFCNTRRKVEELTTKLRND---KFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTD------LLARGIDVQQVS 97 (162)
T ss_dssp CSCEEEEESSHHHHHHHHHHHHHT---TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEEG------GGTTTCCCCSCS
T ss_pred CCcEEEEEEEEchHHHHHHHHhhc---CceEEEeccCCchhhHHHHHHHHhhcccceeeccc------cccccccCCCce
Confidence 558999999999999998776555 889999999999776544 34556789999996 335789999999
Q ss_pred eEEecc
Q 011963 333 LLVVDR 338 (474)
Q Consensus 333 ~lViDE 338 (474)
++|.=+
T Consensus 98 ~VI~~d 103 (162)
T d1fuka_ 98 LVINYD 103 (162)
T ss_dssp EEEESS
T ss_pred EEEEec
Confidence 998744
No 44
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=95.32 E-value=0.014 Score=59.61 Aligned_cols=75 Identities=15% Similarity=0.105 Sum_probs=52.3
Q ss_pred hHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc-cc--CC
Q 011963 207 GIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KA--FG 283 (474)
Q Consensus 207 Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l-~~--~~ 283 (474)
|.++|. .....++|.|+-| ||||.+.+--+. .++..... ..-+.|+|+.|+.-|.++.+.+... .. .+
T Consensus 16 Q~~~v~--~~~~~~lV~A~AG-SGKT~~lv~ri~-~ll~~~~~-----~p~~Il~ltft~~Aa~ei~~Ri~~~l~~~~~~ 86 (623)
T g1qhh.1 16 QQEAVR--TTEGPLLIMAGAG-SGKTRVLTHRIA-YLMAEKHV-----APWNILAITFTNKAAREMRERVQSLLGGAAED 86 (623)
T ss_dssp HHHHHH--CCSSCEEEEECTT-SCHHHHHHHHHH-HHHHTTCC-----CGGGEEEEESSHHHHHHHHHHHHHHHGGGGTT
T ss_pred HHHHHc--CCCCCEEEEEeCc-hHHHHHHHHHHH-HHHHcCCC-----CcccEEEEeccHHHHHHHHHHHHHhcccccCC
Confidence 999886 3456799999999 999987654444 33332111 2236899999999999999888764 22 26
Q ss_pred cEEEEEe
Q 011963 284 IHTVSLH 290 (474)
Q Consensus 284 i~v~~~~ 290 (474)
+.+.+++
T Consensus 87 ~~v~TfH 93 (623)
T g1qhh.1 87 VWISTFH 93 (623)
T ss_dssp SEEEEHH
T ss_pred CEEEcHH
Confidence 7776664
No 45
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.31 E-value=0.049 Score=46.25 Aligned_cols=75 Identities=13% Similarity=0.141 Sum_probs=59.3
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHH---HHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT---GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~---~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
+.++||.|+|+.-+..++..+..+ |+.+..++|+.+...... .+..+..+|||||.- -..++++.++.
T Consensus 32 ~~k~iVF~~~~~~~~~l~~~L~~~---g~~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td~------~~~Gid~~~v~ 102 (171)
T d1s2ma2 32 INQAIIFCNSTNRVELLAKKITDL---GYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDL------LTRGIDIQAVN 102 (171)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHH---TCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESSC------SSSSCCCTTEE
T ss_pred CCceEEEEeeeehhhHhHHhhhcc---cccccccccccchhhhhhhhhhcccCccccccchhH------hhhccccceeE
Confidence 558999999999998888877766 889999999998765443 445668999999972 24788999999
Q ss_pred eEEeccc
Q 011963 333 LLVVDRL 339 (474)
Q Consensus 333 ~lViDEa 339 (474)
++|.=++
T Consensus 103 ~VI~~d~ 109 (171)
T d1s2ma2 103 VVINFDF 109 (171)
T ss_dssp EEEESSC
T ss_pred EEEecCC
Confidence 9885443
No 46
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.27 E-value=0.0015 Score=59.85 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=41.8
Q ss_pred chhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc---chHHHHHHHhhc
Q 011963 410 DEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS---TGSNCIVSHIKN 473 (474)
Q Consensus 410 ~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~---~~r~~~i~~Fk~ 473 (474)
.++|+..|..+|..+ +.++||||+|++.|+.|+.+|... +... .+|+.++++|++
T Consensus 10 ~~~~~~~l~~~l~~~--------~~~~iif~~~~~~~~~l~~~l~~~-~hg~~~~~~R~~~~~~f~~ 67 (248)
T d1gkub2 10 NDESISTLSSILEKL--------GTGGIIYARTGEEAEEIYESLKNK-FRIGIVTATKKGDYEKFVE 67 (248)
T ss_dssp SCCCTTTTHHHHTTS--------CSCEEEEESSHHHHHHHHHTTTTS-SCEEECTTSSSHHHHHHHH
T ss_pred CchHHHHHHHHHHHh--------CCCEEEEECCHHHHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHh
Confidence 355885555555432 568999999999999999999875 3333 788899999975
No 47
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.27 E-value=0.15 Score=44.73 Aligned_cols=49 Identities=12% Similarity=0.173 Sum_probs=32.5
Q ss_pred eEEeccccccCC----hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhc
Q 011963 333 LLVVDRLDSLSK----GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLL 381 (474)
Q Consensus 333 ~lViDEad~ll~----~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~ 381 (474)
+++||=|-+... ..++..+.....+..-.++++||...+....+..++.
T Consensus 95 ~vlIDTaGr~~~d~~~~~el~~~~~~~~~~~~llv~~a~~~~~~~~~~~~f~~ 147 (207)
T d1ls1a2 95 LILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDE 147 (207)
T ss_dssp EEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGTHHHHHHHHHHHH
T ss_pred ceeecccccchhhhhhHHHHHHHHhhcCCceEEEEeccccchhHHHHHHHHHh
Confidence 444444444433 5566667776676666888899999887777776653
No 48
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.17 E-value=0.054 Score=45.93 Aligned_cols=75 Identities=12% Similarity=0.232 Sum_probs=58.4
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHH---HHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT---GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~---~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
..++||.|+|+.-+..++..+... |+.+..++|+.+..+... .+..+.+.|||+|-- -..++++..+.
T Consensus 27 ~~k~iIF~~~~~~~~~l~~~L~~~---~~~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T~~------~~~Gid~~~~~ 97 (168)
T d1t5ia_ 27 FNQVVIFVKSVQRCIALAQLLVEQ---NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNL------FGRGMDIERVN 97 (168)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHHT---TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEESSC------CSTTCCGGGCS
T ss_pred CCeEEEEEeeeecchhhhhhhccc---cccccccccccchhhhhhhhhhhccccceeeecccc------ccchhhcccch
Confidence 458999999999998888777655 788999999998776544 445667999999942 23678888888
Q ss_pred eEEeccc
Q 011963 333 LLVVDRL 339 (474)
Q Consensus 333 ~lViDEa 339 (474)
++|.=+.
T Consensus 98 ~vi~~~~ 104 (168)
T d1t5ia_ 98 IAFNYDM 104 (168)
T ss_dssp EEEESSC
T ss_pred hhhhhhc
Confidence 8877654
No 49
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.14 E-value=0.038 Score=48.39 Aligned_cols=40 Identities=5% Similarity=0.042 Sum_probs=30.3
Q ss_pred CCCcceEEeccccccCC--hhHHHHHHhhCCCCCcEEEEEcc
Q 011963 328 VSGVSLLVVDRLDSLSK--GDTLSLIRQSISGKPHTVVFNDC 367 (474)
Q Consensus 328 l~~l~~lViDEad~ll~--~~~l~~Il~~l~~~~q~llfSAT 367 (474)
.+.-+++||||||+|-. ...+..++..-|.+..+++.|..
T Consensus 77 ~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~ 118 (198)
T d2gnoa2 77 LYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRR 118 (198)
T ss_dssp SSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESC
T ss_pred cCCCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCC
Confidence 35668999999999987 77777787776777766666444
No 50
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=95.08 E-value=0.07 Score=46.64 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=57.7
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHH---HHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQ---ITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q---~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
+..+||.++|+.-|..+...+... |+.+..++|+.+.... ...+..+..+|||+|- +-..++++.+|+
T Consensus 30 ~~~~IIF~~t~~~~~~l~~~l~~~---~~~~~~~h~~~~~~~r~~~~~~f~~g~~~ilvaTd------~~~~GiD~p~v~ 100 (200)
T d1oywa3 30 GKSGIIYCNSRAKVEDTAARLQSK---GISAAAYHAGLENNVRADVQEKFQRDDLQIVVATV------AFGMGINKPNVR 100 (200)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHT---TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEECT------TSCTTTCCTTCC
T ss_pred CCCEEEEEeeehhhHHhhhhhccC---CceeEEecCCCcHHHHHHHHHHHhcccceEEEecc------hhhhccCCCCCC
Confidence 558999999999999888776655 7899999999986554 3444566899999996 234678999999
Q ss_pred eEEec
Q 011963 333 LLVVD 337 (474)
Q Consensus 333 ~lViD 337 (474)
++|.=
T Consensus 101 ~VI~~ 105 (200)
T d1oywa3 101 FVVHF 105 (200)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 88853
No 51
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=95.03 E-value=0.047 Score=45.57 Aligned_cols=72 Identities=13% Similarity=0.236 Sum_probs=55.5
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHH---HHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQI---TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~---~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
+.++||.++|++-|.+++..+... |+.+..++|+.+..... ..+..+...|||||-- -..++++..+.
T Consensus 28 ~~k~IIF~~s~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~r~~~~~~f~~~~~~ilv~T~~------~~~Gid~~~v~ 98 (155)
T d1hv8a2 28 EFYGLVFCKTKRDTKELASMLRDI---GFKAGAIHGDLSQSQREKVIRLFKQKKIRILIATDV------MSRGIDVNDLN 98 (155)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHT---TCCEEEECSSSCHHHHHHHHHHHHTTSSSEEEECTT------HHHHCCCSCCS
T ss_pred CCCEEEEECchHHHHHHHhhhccc---ccccccccccchhhhhhhhhhhhhcccceeeeehhH------HhhhhhhccCc
Confidence 457999999999999888887765 88999999998866554 3445667899999942 12467888888
Q ss_pred eEEe
Q 011963 333 LLVV 336 (474)
Q Consensus 333 ~lVi 336 (474)
++|.
T Consensus 99 ~Vi~ 102 (155)
T d1hv8a2 99 CVIN 102 (155)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8774
No 52
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=94.31 E-value=0.14 Score=45.09 Aligned_cols=41 Identities=17% Similarity=0.122 Sum_probs=27.2
Q ss_pred CCcceEEeccccccCC----hhHHHHHHhhCC-CCCcEEEEEccCCc
Q 011963 329 SGVSLLVVDRLDSLSK----GDTLSLIRQSIS-GKPHTVVFNDCLTY 370 (474)
Q Consensus 329 ~~l~~lViDEad~ll~----~~~l~~Il~~l~-~~~q~llfSAT~~~ 370 (474)
...++|+||++|.+.. ...+-.++..+- .+.++++ |+..++
T Consensus 96 ~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iii-ts~~~p 141 (213)
T d1l8qa2 96 KSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIIL-ASDRHP 141 (213)
T ss_dssp HTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEE-EESSCG
T ss_pred hhccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEE-ecCCcc
Confidence 3577899999999987 445556666554 4555555 555444
No 53
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.27 E-value=0.15 Score=43.00 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=58.2
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHH---HHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT---GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~---~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
+.++||.+.|++-|..++..+... |+.+..++|+.+...... .+..+..+|||||- +-..++++.+++
T Consensus 34 ~~k~iiF~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~r~~~~~~fk~g~~~iLv~Td------~~~rGiDi~~v~ 104 (168)
T d2j0sa2 34 ITQAVIFCNTKRKVDWLTEKMREA---NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTD------VWARGLDVPQVS 104 (168)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHT---TCCCEEECTTSCHHHHHHHHHHHHHTSSCEEEECG------GGSSSCCCTTEE
T ss_pred CCceEEEeeeHHHHHHHHHHhhhc---ccchhhhhhhhhHHHHHHHHHHHhcCCccEEeccc------hhcccccccCcc
Confidence 568999999999999988877766 788899999998766543 44566789999996 235788998888
Q ss_pred eEEec
Q 011963 333 LLVVD 337 (474)
Q Consensus 333 ~lViD 337 (474)
++|.=
T Consensus 105 ~VIn~ 109 (168)
T d2j0sa2 105 LIINY 109 (168)
T ss_dssp EEEES
T ss_pred eEEEe
Confidence 88853
No 54
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.21 E-value=0.12 Score=43.67 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=57.6
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHH---HHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT---GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~---~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
.-++||.+.+++-+..+...+... |+.+..++|+.+...... .+..+...|||+|.- -..++++.++.
T Consensus 32 ~~~~lIF~~~~~~~~~l~~~l~~~---~~~~~~~hg~~~~~~R~~~~~~F~~g~~~ilv~Td~------~~~Gid~~~v~ 102 (168)
T d2rb4a1 32 IGQAIIFCQTRRNAKWLTVEMIQD---GHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNV------CARGIDVKQVT 102 (168)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHTT---TCCEEEECSSCCHHHHHHHHHHHHTTSCSEEEECCS------CCTTTCCTTEE
T ss_pred CCcEEEEcCHHHHHHHHHHHHHhc---CCcceecccchhhHHHHHHhhhhcCCceeeeechhh------hhhhhcccccc
Confidence 458999999999999988776654 889999999999766543 445667999999962 34778899998
Q ss_pred eEEe
Q 011963 333 LLVV 336 (474)
Q Consensus 333 ~lVi 336 (474)
++|.
T Consensus 103 ~Vi~ 106 (168)
T d2rb4a1 103 IVVN 106 (168)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8876
No 55
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=94.06 E-value=0.0062 Score=56.78 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=27.3
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCccc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~v~ 461 (474)
++++||||+|+..|+.|+..|+..|+++.
T Consensus 36 ggk~LVFcnSR~~aE~La~~L~~~Gi~a~ 64 (299)
T d1a1va2 36 GGRHLIFCHSKKKCDELAAKLVALGINAV 64 (299)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHHCCCCEE
Confidence 67999999999999999999999999876
No 56
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=93.66 E-value=0.057 Score=50.93 Aligned_cols=46 Identities=9% Similarity=0.078 Sum_probs=30.6
Q ss_pred HHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHH
Q 011963 211 WKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268 (474)
Q Consensus 211 i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreL 268 (474)
+.++..+++++++.||| ||||. ++-.++ ..- + ..-+.+.|--+.||
T Consensus 160 ~~~v~~~~nili~G~tg-SGKTT-~l~al~----~~i---~---~~~rivtiEd~~El 205 (323)
T d1g6oa_ 160 KDGIAIGKNVIVCGGTG-SGKTT-YIKSIM----EFI---P---KEERIISIEDTEEI 205 (323)
T ss_dssp HHHHHHTCCEEEEESTT-SSHHH-HHHHHG----GGS---C---TTCCEEEEESSCCC
T ss_pred HHHHHhCCCEEEEeecc-ccchH-HHHHHh----hhc---c---cccceeeccchhhh
Confidence 34456678999999999 99994 332233 211 1 24478888888887
No 57
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=93.58 E-value=0.6 Score=41.15 Aligned_cols=41 Identities=10% Similarity=0.077 Sum_probs=26.3
Q ss_pred CCcceEEeccccccCC--hhHHHHHHhhCCCCCcEEEEEccCCc
Q 011963 329 SGVSLLVVDRLDSLSK--GDTLSLIRQSISGKPHTVVFNDCLTY 370 (474)
Q Consensus 329 ~~l~~lViDEad~ll~--~~~l~~Il~~l~~~~q~llfSAT~~~ 370 (474)
...+++||||+|.|.. ...+..++...+....++ +.++-+.
T Consensus 114 ~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~i-l~tn~~~ 156 (239)
T d1njfa_ 114 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFL-LATTDPQ 156 (239)
T ss_dssp SSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEE-EEESCGG
T ss_pred CCCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEE-EEcCCcc
Confidence 3467999999999875 556666666545544444 4444333
No 58
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=93.42 E-value=0.064 Score=52.35 Aligned_cols=59 Identities=14% Similarity=0.026 Sum_probs=43.9
Q ss_pred hHHHHHHHhc----C-CcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc
Q 011963 207 GIEFWKCYSS----A-KDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL 279 (474)
Q Consensus 207 Q~~~i~~~l~----g-~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l 279 (474)
|=+||..+.. | ++.++..-|| ||||+.. ..+.... +-.+|||+|+..+|.|+++.+..+
T Consensus 16 QP~aI~~l~~~l~~g~~~q~l~GltG-S~ka~~i-----A~l~~~~--------~rp~LVVt~n~~~A~qL~~dL~~~ 79 (413)
T d1t5la1 16 QPQAIAKLVDGLRRGVKHQTLLGATG-TGKTFTI-----SNVIAQV--------NKPTLVIAHNKTLAGQLYSELKEF 79 (413)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTT-SCHHHHH-----HHHHHHH--------TCCEEEECSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCcEEEeCCCC-cHHHHHH-----HHHHHHh--------CCCEEEEeCCHHHHHHHHHHHHHH
Confidence 6666666554 4 5788999999 9998643 2333322 225799999999999999999987
No 59
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.69 E-value=0.026 Score=50.44 Aligned_cols=40 Identities=13% Similarity=0.090 Sum_probs=27.0
Q ss_pred CCcceEEeccccccCC--hhHHHHHHhhCCCCCcEEEEEccCC
Q 011963 329 SGVSLLVVDRLDSLSK--GDTLSLIRQSISGKPHTVVFNDCLT 369 (474)
Q Consensus 329 ~~l~~lViDEad~ll~--~~~l~~Il~~l~~~~q~llfSAT~~ 369 (474)
....++||||+|.|.. ...+..++...+.++.+++ +++-+
T Consensus 130 ~~~~iiiide~d~l~~~~~~~l~~~~e~~~~~~~~Il-~tn~~ 171 (252)
T d1sxje2 130 HRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIM-VCDSM 171 (252)
T ss_dssp -CCEEEEEECTTSSCHHHHHHHHHHHHHSTTTEEEEE-EESCS
T ss_pred CCceEEEeccccccccccchhhhccccccccccccee-eeccc
Confidence 4467999999999876 6667777777665554444 44433
No 60
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.60 E-value=0.025 Score=49.25 Aligned_cols=56 Identities=11% Similarity=0.078 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc---chHHHHHHHhhc
Q 011963 411 EEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS---TGSNCIVSHIKN 473 (474)
Q Consensus 411 ~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~---~~r~~~i~~Fk~ 473 (474)
..|+..|. .++..+. ..++||||++...++.|+..|....+.-. .+|+.++++|++
T Consensus 78 ~~K~~~l~----~ll~~~~---~~k~lvf~~~~~~~~~l~~~l~~~~i~g~~~~~~R~~~l~~F~~ 136 (200)
T d2fwra1 78 KNKIRKLR----EILERHR---KDKIIIFTRHNELVYRISKVFLIPAITHRTSREEREEILEGFRT 136 (200)
T ss_dssp SHHHHHHH----HHHHHTS---SSCBCCBCSCHHHHHHHHHHTTCCBCCSSSCSHHHHTHHHHHHH
T ss_pred HHHHHHHH----HHHHhCC---CCcEEEEeCcHHHHHHHHhhcCcceeeCCCCHHHHHHHHHHhhc
Confidence 35775444 4444555 78999999999999999999987665543 578889999974
No 61
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=92.36 E-value=0.35 Score=42.38 Aligned_cols=66 Identities=14% Similarity=-0.007 Sum_probs=33.6
Q ss_pred EEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc-ccCCcEEEEEecCCCHHH
Q 011963 220 ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDH 297 (474)
Q Consensus 220 vl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~~~ 297 (474)
++.+.||| +|||.+-.= +..++... ...-+||-+-|.--+ -.++++.+ ...++.+.....+.....
T Consensus 12 i~lvGptG-vGKTTTiAK-LA~~~~~~--------g~kV~lit~Dt~R~g--A~eQL~~~a~~l~v~~~~~~~~~d~~~ 78 (211)
T d2qy9a2 12 ILMVGVNG-VGKTTTIGK-LARQFEQQ--------GKSVMLAAGDTFRAA--AVEQLQVWGQRNNIPVIAQHTGADSAS 78 (211)
T ss_dssp EEEECCTT-SCHHHHHHH-HHHHHHTT--------TCCEEEECCCTTCHH--HHHHHHHHHHHTTCCEECCSTTCCHHH
T ss_pred EEEECCCC-CCHHHHHHH-HHHHHHHC--------CCcEEEEeccccccc--chhhhhhhhhhcCCcccccccCCCHHH
Confidence 45689999 999975432 22222221 122444445553332 12334444 223777776666665443
No 62
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.06 E-value=0.4 Score=41.60 Aligned_cols=40 Identities=18% Similarity=0.355 Sum_probs=27.3
Q ss_pred CCCCCCCcceEEeccccccCC--hhHHHHHHhhCCCCCcEEE
Q 011963 324 KAIDVSGVSLLVVDRLDSLSK--GDTLSLIRQSISGKPHTVV 363 (474)
Q Consensus 324 ~~~~l~~l~~lViDEad~ll~--~~~l~~Il~~l~~~~q~ll 363 (474)
.......-+++||||+|.|.. ...+..++...+..+.+++
T Consensus 93 ~~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~ 134 (227)
T d1sxjc2 93 RQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCV 134 (227)
T ss_dssp CCSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEE
T ss_pred ccccCCCeEEEEEeccccchhhHHHHHHHHhhhcccceeecc
Confidence 334455567999999999987 6667777776655444333
No 63
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=91.59 E-value=0.15 Score=43.48 Aligned_cols=48 Identities=19% Similarity=0.039 Sum_probs=40.6
Q ss_pred CchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc
Q 011963 409 SDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461 (474)
Q Consensus 409 ~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~ 461 (474)
....|+..+.+.+...... +.|+||||.|.+.++.++.+|...|++..
T Consensus 15 T~~eK~~AIi~eV~~~~~~-----grPVLIgT~SIe~SE~ls~~L~~~gi~h~ 62 (175)
T d1tf5a4 15 TMEGKFKAVAEDVAQRYMT-----GQPVLVGTVAVETSELISKLLKNKGIPHQ 62 (175)
T ss_dssp SHHHHHHHHHHHHHHHHHH-----TCCEEEEESCHHHHHHHHHHHHTTTCCCE
T ss_pred CHHHHHHHHHHHHHHHHhc-----CCCEEEEeCcHHHHHHHHHHHHHcCCCce
Confidence 3677888777777776555 56999999999999999999999999865
No 64
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=91.55 E-value=0.63 Score=40.73 Aligned_cols=64 Identities=17% Similarity=0.033 Sum_probs=33.9
Q ss_pred EEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc-ccCCcEEEEEecCCCH
Q 011963 220 ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAI 295 (474)
Q Consensus 220 vl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~ 295 (474)
++.+.||| +|||.+-+= +..++... ...-+||-+-|.-.+.. ++++.+ ..+++.+.....+...
T Consensus 14 i~lvGptG-vGKTTTiAK-LAa~~~~~--------~~kV~lit~Dt~R~gA~--eQL~~~a~~l~i~~~~~~~~~d~ 78 (213)
T d1vmaa2 14 IMVVGVNG-TGKTTSCGK-LAKMFVDE--------GKSVVLAAADTFRAAAI--EQLKIWGERVGATVISHSEGADP 78 (213)
T ss_dssp EEEECCTT-SSHHHHHHH-HHHHHHHT--------TCCEEEEEECTTCHHHH--HHHHHHHHHHTCEEECCSTTCCH
T ss_pred EEEECCCC-CCHHHHHHH-HHHHHHHC--------CCceEEEeecccccchh--HHHHHHhhhcCccccccCCCCcH
Confidence 46689999 999976432 22333321 13355666665444331 333333 2227777665555443
No 65
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.55 E-value=0.27 Score=42.94 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=25.9
Q ss_pred CcceEEeccccccCC--hhHHHHHHhhCCCCCcEEEEEccCC
Q 011963 330 GVSLLVVDRLDSLSK--GDTLSLIRQSISGKPHTVVFNDCLT 369 (474)
Q Consensus 330 ~l~~lViDEad~ll~--~~~l~~Il~~l~~~~q~llfSAT~~ 369 (474)
..+.+||||+|.|.. ...+..++...+....+++.+....
T Consensus 108 ~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~ 149 (237)
T d1sxjd2 108 PYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVT 149 (237)
T ss_dssp SCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGG
T ss_pred CceEEEEecccccCHHHHHHHhhccccccccccccccccccc
Confidence 345899999999987 5566666666555555544444333
No 66
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.36 E-value=0.075 Score=46.72 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=31.3
Q ss_pred CCCcceEEeccccccCC--hhHHHHHHhhCCCCCcEEEEEccCCc
Q 011963 328 VSGVSLLVVDRLDSLSK--GDTLSLIRQSISGKPHTVVFNDCLTY 370 (474)
Q Consensus 328 l~~l~~lViDEad~ll~--~~~l~~Il~~l~~~~q~llfSAT~~~ 370 (474)
...-+++|+||+|.|.. ...+...+...+..+.+++.+.....
T Consensus 99 ~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~ 143 (224)
T d1sxjb2 99 PGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNK 143 (224)
T ss_dssp TTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGG
T ss_pred CcceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhh
Confidence 34567999999999998 66666777776766666666655443
No 67
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=90.71 E-value=0.19 Score=44.83 Aligned_cols=58 Identities=10% Similarity=0.192 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhC-CCccc--------chHHHHHHHhhc
Q 011963 411 EEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK-GYSIS--------TGSNCIVSHIKN 473 (474)
Q Consensus 411 ~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~-gi~v~--------~~r~~~i~~Fk~ 473 (474)
..|+..+.++|..+... +.++||||+.....+.+...|... |+++. .+|+..+++|.+
T Consensus 68 S~K~~~l~~~l~~~~~~-----g~kviIFs~~~~~~~~l~~~l~~~~~~~~~~i~G~~~~~~R~~~i~~F~~ 134 (244)
T d1z5za1 68 SGKMIRTMEIIEEALDE-----GDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQN 134 (244)
T ss_dssp CHHHHHHHHHHHHHHHT-----TCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTSCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhhccc-----ccceEEEeeceehHHHHHHHHHhhccceEEEEecccchhccchhhhhhhc
Confidence 45998888888887654 569999999999999999988654 67654 578899999964
No 68
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=89.50 E-value=0.86 Score=39.73 Aligned_cols=129 Identities=13% Similarity=-0.025 Sum_probs=58.2
Q ss_pred EEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhccc-CCcEEEEEecCCCHHHH
Q 011963 220 ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQ 298 (474)
Q Consensus 220 vl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~-~~i~v~~~~gg~~~~~q 298 (474)
++.+.||| +|||.+-+= +..++... ...-+||-+-|.-.+. .++++.+.. .|+.+............
T Consensus 15 i~lvGptG-vGKTTTiAK-LA~~~~~~--------g~kV~lit~Dt~R~ga--~eQL~~~a~~l~v~~~~~~~~~~~~~~ 82 (211)
T d1j8yf2 15 IMLVGVQG-TGKATTAGK-LAYFYKKK--------GFKVGLVGADVYRPAA--LEQLQQLGQQIGVPVYGEPGEKDVVGI 82 (211)
T ss_dssp EEEECSCC-C----HHHH-HHHHHHHT--------TCCEEEEECCCSSHHH--HHHHHHHHHHHTCCEECCTTCCCHHHH
T ss_pred EEEECCCC-CCHHHHHHH-HHHHHHHC--------CCceEEEEeeccccch--hHHHHHhccccCcceeecccchhhhHH
Confidence 45689999 999965432 22233221 1224555555433332 133333322 26666555555443322
Q ss_pred HHH-----HhcCCCc-EEEEChHHHHHHHHcCCCCCCCcceEEeccccccCChhHHHHHHhhCCCCCcEEEEEccCCccH
Q 011963 299 ITG-----LRSCEPE-FLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTS 372 (474)
Q Consensus 299 ~~~-----l~~~~~~-IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~~~~l~~Il~~l~~~~q~llfSAT~~~~v 372 (474)
... ... ++| |||=||||.. .|+. +....++..+...+.+..-.++++|+...+.
T Consensus 83 ~~~a~~~~~~~-~~d~IlIDTaGr~~-----------------~~~~--~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~ 142 (211)
T d1j8yf2 83 AKRGVEKFLSE-KMEIIIVDTAGRHG-----------------YGEE--AALLEEMKNIYEAIKPDEVTLVIDASIGQKA 142 (211)
T ss_dssp HHHHHHHHHHT-TCSEEEEECCCSCC-----------------TTCH--HHHHHHHHHHHHHHCCSEEEEEEEGGGGGGH
T ss_pred HHHHHHHhhcc-CCceEEEecCCcCc-----------------cchh--hHHHHHHHHHHhhcCCceEEEEEecccCcch
Confidence 111 112 233 4555666420 0100 0003455666666665555777888887765
Q ss_pred HHHHHHhh
Q 011963 373 VPAVQNLL 380 (474)
Q Consensus 373 ~~l~~~~l 380 (474)
...+..++
T Consensus 143 ~~~~~~~~ 150 (211)
T d1j8yf2 143 YDLASKFN 150 (211)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhhh
Confidence 55444443
No 69
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=89.10 E-value=0.81 Score=40.70 Aligned_cols=16 Identities=6% Similarity=-0.095 Sum_probs=13.8
Q ss_pred CcEEEEcCCCcchhHHH
Q 011963 218 KDILETSGSSSTIVQIA 234 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTla 234 (474)
+.+|+..|+| +|||+.
T Consensus 41 ~~vLL~GppG-tGKT~l 56 (246)
T d1d2na_ 41 VSVLLEGPPH-SGKTAL 56 (246)
T ss_dssp EEEEEECSTT-SSHHHH
T ss_pred eEEEEECcCC-CCHHHH
Confidence 3689999999 999964
No 70
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=89.06 E-value=1.9 Score=34.68 Aligned_cols=98 Identities=9% Similarity=0.009 Sum_probs=56.8
Q ss_pred EEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHH
Q 011963 221 LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT 300 (474)
Q Consensus 221 l~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~ 300 (474)
++..|.. |||| +.++-.+.+... .+-.++++-|...- .+ +-.+.+..|. .
T Consensus 6 ~i~GpMf-sGKT-teLi~~~~~~~~---------~~~kv~~ikp~~D~-----------R~-~~~i~s~~g~-~------ 55 (139)
T d2b8ta1 6 FITGPMF-AGKT-AELIRRLHRLEY---------ADVKYLVFKPKIDT-----------RS-IRNIQSRTGT-S------ 55 (139)
T ss_dssp EEECSTT-SCHH-HHHHHHHHHHHH---------TTCCEEEEEECCCG-----------GG-CSSCCCCCCC-S------
T ss_pred EEEcccc-CHHH-HHHHHHHHHHHH---------CCCcEEEEEEcccc-----------cc-cceEEcccCc-e------
Confidence 5789999 9999 455555544433 25578888885221 00 1111111111 1
Q ss_pred HHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC-hhHHHHHHhh
Q 011963 301 GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK-GDTLSLIRQS 354 (474)
Q Consensus 301 ~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~-~~~l~~Il~~ 354 (474)
-+.+.|.+...+.+++..... ..+.+++.||||+-+-+ ..++..++..
T Consensus 56 -----~~~~~~~~~~~~~~~~~~~~~-~~~~dvI~IDE~QFf~d~i~~~~~~~~~ 104 (139)
T d2b8ta1 56 -----LPSVEVESAPEILNYIMSNSF-NDETKVIGIDEVQFFDDRICEVANILAE 104 (139)
T ss_dssp -----SCCEEESSTHHHHHHHHSTTS-CTTCCEEEECSGGGSCTHHHHHHHHHHH
T ss_pred -----eeeEEeccchhhHHHHHhhcc-ccCcCEEEechhhhcchhHHHHHHHHHh
Confidence 234666666667677665433 35788999999998865 4444444443
No 71
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=89.01 E-value=0.21 Score=40.70 Aligned_cols=66 Identities=17% Similarity=0.273 Sum_probs=50.0
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEE
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLV 335 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lV 335 (474)
+-++||.|+|+.-|.++...|..+ |+.+..++|+..... ..++..+|||||- .+ ..+++ .+++++|
T Consensus 35 ~~k~IVFc~t~~~ae~la~~L~~~---G~~~~~~H~~~~~~~----~~~~~~~vlvaTd-----~~-~~GiD-~~v~~Vi 100 (138)
T d1jr6a_ 35 GGRHLIFCHSKKKCDELAAKLVAL---GINAVAYYRGLDVSV----IPTNGDVVVVATD-----AL-MTGFT-GDFDSVI 100 (138)
T ss_dssp TSCEEEECSCHHHHHHHHHHHHHH---TCEEEEECTTCCSCC----CTTSSCEEEEESS-----SS-CSSSC-CCBSEEE
T ss_pred CCCEEEEeCcHHHHHHHHHHHhcc---ccchhhhhccchhhh----hhhhhcceeehhH-----HH-Hhccc-cccceEE
Confidence 448999999999999999888766 899999999987443 3445789999994 22 24466 5677764
No 72
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=88.97 E-value=0.48 Score=45.78 Aligned_cols=69 Identities=14% Similarity=0.038 Sum_probs=47.6
Q ss_pred CCCccccCCCchhhHHHHHHH----hcCC-cEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHH
Q 011963 194 GVEQDNPLFVNSWGIEFWKCY----SSAK-DILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268 (474)
Q Consensus 194 g~~~ptpi~~~~~Q~~~i~~~----l~g~-dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreL 268 (474)
.|+.|||-.- |-+||..+ ..|. .+.+..-+| |||++. +.. +.... +--+|||+|+.+.
T Consensus 3 ~~~~~~p~~d---qp~aI~~l~~~L~~g~~~~~L~Glsg-S~ka~~--~A~---l~~~~--------~rp~LvVt~~~~~ 65 (408)
T d1c4oa1 3 RYRGPSPKGD---QPKAIAGLVEALRDGERFVTLLGATG-TGKTVT--MAK---VIEAL--------GRPALVLAPNKIL 65 (408)
T ss_dssp CCCSCCCCTT---HHHHHHHHHHHHHTTCSEEEEEECTT-SCHHHH--HHH---HHHHH--------TCCEEEEESSHHH
T ss_pred cccCCCCCCC---CHHHHHHHHHHHhcCCCcEEEecCCC-CHHHHH--HHH---HHHHh--------CCCEEEEeCCHHH
Confidence 4677888733 55566554 4454 578888999 999753 222 33321 1146899999999
Q ss_pred HHHHHHHHHhc
Q 011963 269 AAKVRSVCKPL 279 (474)
Q Consensus 269 a~Qi~~~~~~l 279 (474)
|.++++.+..+
T Consensus 66 A~~l~~dL~~~ 76 (408)
T d1c4oa1 66 AAQLAAEFREL 76 (408)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999987
No 73
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=88.96 E-value=0.59 Score=40.66 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=24.3
Q ss_pred CCCCCcceEEeccccccCC--hhHHHHHHhhCCCCCcEEE
Q 011963 326 IDVSGVSLLVVDRLDSLSK--GDTLSLIRQSISGKPHTVV 363 (474)
Q Consensus 326 ~~l~~l~~lViDEad~ll~--~~~l~~Il~~l~~~~q~ll 363 (474)
.....-.++++||+|.+.. ...+..++........+++
T Consensus 105 ~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~ 144 (231)
T d1iqpa2 105 IGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFIL 144 (231)
T ss_dssp GGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEE
T ss_pred ccCCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEe
Confidence 3344567899999999987 5555566655444443333
No 74
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=88.76 E-value=0.34 Score=44.79 Aligned_cols=69 Identities=13% Similarity=0.191 Sum_probs=46.6
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEE
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLV 335 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lV 335 (474)
+..+||++|+..-+.++...+... |..|+.++|.+....+ ..+..+..+|||+|. +-...+++ ++.++|
T Consensus 36 ~g~~~~F~~s~~~~~~~a~~L~~~---g~~V~~l~~~~~~~e~-~~~~~~~~~~~~~t~------~~~~~~~~-~~~~vi 104 (299)
T d1yksa2 36 KRPTAWFLPSIRAANVMAASLRKA---GKSVVVLNRKTFEREY-PTIKQKKPDFILATD------IAEMGANL-CVERVL 104 (299)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHT---TCCEEECCSSSCC---------CCCSEEEESS------STTCCTTC-CCSEEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhc---CCeEEEEcCcCcHhHH-hhhhcCCcCEEEEec------hhhhceec-CceEEE
Confidence 447999999998888887777654 7789999998775554 445666899999996 33456666 466554
No 75
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=88.38 E-value=0.34 Score=45.79 Aligned_cols=59 Identities=15% Similarity=0.100 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc--------chHHHHHHHhhc
Q 011963 411 EEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS--------TGSNCIVSHIKN 473 (474)
Q Consensus 411 ~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~--------~~r~~~i~~Fk~ 473 (474)
..|+..|..+|..+... . +.++|||++.....+.|...|...|+++. .+|+..++.|.+
T Consensus 100 S~Kl~~L~~ll~~~~~~-~---g~KvlIFs~~~~~ld~l~~~l~~~g~~~~~l~G~~~~~~R~~~i~~F~~ 166 (346)
T d1z3ix1 100 SGKMLVLDYILAMTRTT-T---SDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNN 166 (346)
T ss_dssp SHHHHHHHHHHHHHHHH-C---CCEEEEEESCHHHHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHh-c---CCceeEEeehhhhhHHHHHHHhhhhccccccccchhHHHHHHHHHhhhc
Confidence 46887777777665433 2 57999999999999999999999999875 578899999964
No 76
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=88.37 E-value=1.2 Score=39.67 Aligned_cols=16 Identities=13% Similarity=-0.047 Sum_probs=13.5
Q ss_pred CcEEEEcCCCcchhHHH
Q 011963 218 KDILETSGSSSTIVQIA 234 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTla 234 (474)
+.+|+..|.| +|||+.
T Consensus 43 ~giLl~GppG-tGKT~l 58 (247)
T d1ixza_ 43 KGVLLVGPPG-VGKTHL 58 (247)
T ss_dssp SEEEEECCTT-SSHHHH
T ss_pred ceEEEecCCC-CChhHH
Confidence 3579999999 999964
No 77
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=88.06 E-value=1.9 Score=37.30 Aligned_cols=17 Identities=6% Similarity=-0.087 Sum_probs=13.6
Q ss_pred CcEEEEcCCCcchhHHHH
Q 011963 218 KDILETSGSSSTIVQIAW 235 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTlaf 235 (474)
+=++++.||| +|||.+-
T Consensus 7 ~vi~lvGptG-vGKTTTi 23 (207)
T d1okkd2 7 RVVLVVGVNG-VGKTTTI 23 (207)
T ss_dssp SEEEEECSTT-SSHHHHH
T ss_pred EEEEEECCCC-CCHHHHH
Confidence 4467789999 9999764
No 78
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=87.74 E-value=0.1 Score=45.82 Aligned_cols=95 Identities=18% Similarity=0.216 Sum_probs=64.6
Q ss_pred CCcEEEEEeccHHHHH-----HHHHHHHhc-ccC--CcEEEEEecCCCH---HHHHHHHhcCCCcEEEEChHHHHHHHHc
Q 011963 255 TGPFLLFLVSSQEKAA-----KVRSVCKPL-KAF--GIHTVSLHPGAAI---DHQITGLRSCEPEFLVSTPERLLKLVSL 323 (474)
Q Consensus 255 ~~~~alil~PtreLa~-----Qi~~~~~~l-~~~--~i~v~~~~gg~~~---~~q~~~l~~~~~~IlV~TP~rL~~ll~~ 323 (474)
++-++.||+|.-+=.. .....+..+ ..+ ++++..+||.++. +.......++..+|||||. +-.
T Consensus 28 ~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~~iLVaTt------ViE 101 (206)
T d1gm5a4 28 RGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYDILVSTT------VIE 101 (206)
T ss_dssp TSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSSSBCCCSS------CCC
T ss_pred cCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEEEeh------hhh
Confidence 4668889999643211 122333444 222 7888899999774 4445666777899999995 335
Q ss_pred CCCCCCCcceEEeccccccCChhHHHHHHhhCC
Q 011963 324 KAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSIS 356 (474)
Q Consensus 324 ~~~~l~~l~~lViDEad~ll~~~~l~~Il~~l~ 356 (474)
.++|+.++.++||..|+++. ..+|.++.....
T Consensus 102 ~GIDip~a~~iii~~a~~fg-lsqlhQlrGRvG 133 (206)
T d1gm5a4 102 VGIDVPRANVMVIENPERFG-LAQLHQLRGRVG 133 (206)
T ss_dssp SCSCCTTCCEEEBCSCSSSC-TTHHHHHHHTSC
T ss_pred ccccccCCcEEEEEccCCcc-HHHHHhhhhhee
Confidence 78999999999999999876 667777766664
No 79
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=87.65 E-value=0.072 Score=44.56 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=32.4
Q ss_pred CCCcceEEeccccccCC--hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhh
Q 011963 328 VSGVSLLVVDRLDSLSK--GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLL 380 (474)
Q Consensus 328 l~~l~~lViDEad~ll~--~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l 380 (474)
....++|++||++.... ...+..+...+.....+++++.--.. +..++..+.
T Consensus 97 ~~~~~vlllDE~~~~~~~~~~~~~~l~~~l~~~~~~il~~~h~~~-~~~~~~~i~ 150 (178)
T d1ye8a1 97 KDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRD-VHPLVKEIR 150 (178)
T ss_dssp HCTTCEEEECCCSTTGGGCHHHHHHHHHHHTCTTSEEEEECCSSC-CSHHHHHHH
T ss_pred hcCCCceeecCCCccchhhHHHHHHHHHHhccCCCEEEEEEccHH-HHHhhceEE
Confidence 35678999999876655 55555666666655667776655433 344555443
No 80
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=86.76 E-value=0.27 Score=42.60 Aligned_cols=32 Identities=9% Similarity=0.123 Sum_probs=25.7
Q ss_pred HHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhh
Q 011963 419 QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKC 455 (474)
Q Consensus 419 ~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~ 455 (474)
+++..++.+ +.++||||+|++.|+.+|..|..
T Consensus 31 ~l~~~~i~~-----~~~~LVF~~sRk~~~~~A~~L~~ 62 (201)
T d2p6ra4 31 ELVEECVAE-----NGGVLVFESTRRGAEKTAVKLSA 62 (201)
T ss_dssp HHHHHHHHT-----TCCEEEECSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-----CCcEEEEeCCHHHHHHHHHHHHH
Confidence 556666655 45999999999999999988865
No 81
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=86.66 E-value=2 Score=38.47 Aligned_cols=73 Identities=22% Similarity=0.240 Sum_probs=53.1
Q ss_pred CCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCH-----------HHHHHHHhcCCCcEEEEChHHHHHHHHc
Q 011963 255 TGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAI-----------DHQITGLRSCEPEFLVSTPERLLKLVSL 323 (474)
Q Consensus 255 ~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~-----------~~q~~~l~~~~~~IlV~TP~rL~~ll~~ 323 (474)
.+.++||.+.+++-+.-+++.+... ++++..++|.... ......+.++.++|||+|- +-.
T Consensus 160 ~~~k~iiF~~~~~~~~~~~~~L~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~~~vLv~T~------~~~ 230 (286)
T d1wp9a2 160 QNSKIIVFTNYRETAKKIVNELVKD---GIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVATS------VGE 230 (286)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHT---TCCEEEECCSSCC-------CCHHHHHHHHHHHTSCSEEEECG------GGG
T ss_pred CCCcEEEEeCcHHhHHHHHHHHHHc---CCceEEeeccccccccchhchHHHHHHHHHHHcCCCcEEEEcc------cee
Confidence 3568999999999998888876653 6777777764332 1224455666789999994 224
Q ss_pred CCCCCCCcceEEe
Q 011963 324 KAIDVSGVSLLVV 336 (474)
Q Consensus 324 ~~~~l~~l~~lVi 336 (474)
.++++..+.++|+
T Consensus 231 ~Gld~~~~~~Vi~ 243 (286)
T d1wp9a2 231 EGLDVPEVDLVVF 243 (286)
T ss_dssp GGGGSTTCCEEEE
T ss_pred ccccCCCCCEEEE
Confidence 6788999999986
No 82
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.11 E-value=4.3 Score=35.83 Aligned_cols=16 Identities=19% Similarity=0.086 Sum_probs=13.4
Q ss_pred CcEEEEcCCCcchhHHH
Q 011963 218 KDILETSGSSSTIVQIA 234 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTla 234 (474)
+.+|+..|.| ||||+.
T Consensus 39 ~giLL~GppG-tGKT~l 54 (258)
T d1e32a2 39 RGILLYGPPG-TGKTLI 54 (258)
T ss_dssp CEEEEECCTT-SSHHHH
T ss_pred ceeEEecCCC-CCchHH
Confidence 3579999999 999963
No 83
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=85.87 E-value=0.31 Score=42.72 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=28.0
Q ss_pred HHHHHhcC-----CcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEe
Q 011963 210 FWKCYSSA-----KDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLV 263 (474)
Q Consensus 210 ~i~~~l~g-----~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~ 263 (474)
.+..++.| .-+++.+|+| +|||. |++-++..+.. .+..+++++
T Consensus 14 ~LD~~l~GGi~~gsl~li~G~pG-sGKT~-l~~qia~~~~~---------~~~~~~~is 61 (242)
T d1tf7a2 14 RLDEMCGGGFFKDSIILATGATG-TGKTL-LVSRFVENACA---------NKERAILFA 61 (242)
T ss_dssp HHHHHTTSSEESSCEEEEEECTT-SSHHH-HHHHHHHHHHT---------TTCCEEEEE
T ss_pred HHHHhhcCCCcCCeEEEEEeCCC-CCHHH-HHHHHHHHHHH---------hccccceee
Confidence 45666664 4688899999 99994 44444444433 355677776
No 84
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=85.28 E-value=0.29 Score=43.65 Aligned_cols=74 Identities=14% Similarity=0.127 Sum_probs=49.1
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC---HHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCC-Cc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA---IDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVS-GV 331 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~---~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~-~l 331 (474)
+..+||.++|++-|..++..+... ++||.+ .......+..+.++|||||... .-+-..++|+. .|
T Consensus 25 ~~~~iif~~~~~~~~~l~~~l~~~---------~hg~~~~~~R~~~~~~f~~g~~~vLVaT~a~--~~v~~rGlDip~~v 93 (248)
T d1gkub2 25 GTGGIIYARTGEEAEEIYESLKNK---------FRIGIVTATKKGDYEKFVEGEIDHLIGTAHY--YGTLVRGLDLPERI 93 (248)
T ss_dssp CSCEEEEESSHHHHHHHHHTTTTS---------SCEEECTTSSSHHHHHHHHTSCSEEEEECC--------CCSCCTTTC
T ss_pred CCCEEEEECCHHHHHHHHHHHHHh---------ccCCCCHHHHHHHHHHHHhCCCeEEEEeccc--cchhhhccCccccc
Confidence 557999999999999888776542 344433 2334566777789999999521 01124678886 59
Q ss_pred ceEEecccc
Q 011963 332 SLLVVDRLD 340 (474)
Q Consensus 332 ~~lViDEad 340 (474)
+++|.=.+.
T Consensus 94 ~~VI~~d~P 102 (248)
T d1gkub2 94 RFAVFVGCP 102 (248)
T ss_dssp CEEEEESCC
T ss_pred cEEEEeCCC
Confidence 999965554
No 85
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=85.01 E-value=0.32 Score=46.75 Aligned_cols=47 Identities=9% Similarity=0.119 Sum_probs=33.8
Q ss_pred HHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHH
Q 011963 213 CYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAA 270 (474)
Q Consensus 213 ~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~ 270 (474)
.-...+++++.++|| ||||.+ +..++..+.. .+..+||+=|..|+..
T Consensus 46 ~~~~~~H~~I~G~tG-sGKT~~-l~~li~~~~~---------~g~~~iiiD~kge~~~ 92 (433)
T d1e9ra_ 46 RDAEPRHLLVNGATG-TGKSVL-LRELAYTGLL---------RGDRMVIVDPNGDMLS 92 (433)
T ss_dssp GGGGGGCEEEEECTT-SSHHHH-HHHHHHHHHH---------TTCEEEEEEETTHHHH
T ss_pred CCcccceEEEEeCCC-CcHHHH-HHHHHHHHHh---------CCCCEEEEeCChhHHH
Confidence 335568999999999 999965 4555655554 2556788888887754
No 86
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=83.82 E-value=0.56 Score=42.58 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=21.0
Q ss_pred eEEeccccccCC-------hhHHHHHHhhC-C-CCCcEEE
Q 011963 333 LLVVDRLDSLSK-------GDTLSLIRQSI-S-GKPHTVV 363 (474)
Q Consensus 333 ~lViDEad~ll~-------~~~l~~Il~~l-~-~~~q~ll 363 (474)
.|+|||+|.|+. ..++..+++.. . ...|+|+
T Consensus 113 IlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~rg~i~vIg 152 (268)
T d1r6bx2 113 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIG 152 (268)
T ss_dssp EEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSSCCCEEEE
T ss_pred eEEecchHHHhcCCCCCCccccHHHHhhHHHhCCCCeEEE
Confidence 688999999986 23566677643 2 4456555
No 87
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=83.62 E-value=10 Score=31.85 Aligned_cols=118 Identities=12% Similarity=0.130 Sum_probs=66.5
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhc-ccC--------------------------CcEEEEEecCCCHHHH---HHHHhcC
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAF--------------------------GIHTVSLHPGAAIDHQ---ITGLRSC 305 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l-~~~--------------------------~i~v~~~~gg~~~~~q---~~~l~~~ 305 (474)
+-.+||.+|||..|..+...+..+ ... ...++..+||.+.... ...+.++
T Consensus 40 ~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~g 119 (201)
T d2p6ra4 40 NGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRRG 119 (201)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHTT
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhCC
Confidence 336899999987776666555442 100 0126778999885543 2344566
Q ss_pred CCcEEEEChHHHHHHHHcCCCCCCCcceEEec-----cccccCChhHHHHHHhhCCC---CCc--EEEEEccCCccHHHH
Q 011963 306 EPEFLVSTPERLLKLVSLKAIDVSGVSLLVVD-----RLDSLSKGDTLSLIRQSISG---KPH--TVVFNDCLTYTSVPA 375 (474)
Q Consensus 306 ~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViD-----Ead~ll~~~~l~~Il~~l~~---~~q--~llfSAT~~~~v~~l 375 (474)
..+|||||..- ..++++.....+|.| ..+.-....++.++...... +.+ .+++ +.+.+-..+
T Consensus 120 ~i~vlvaT~~l------~~Gin~p~~~vvi~~~~~~d~~~~~~~~~~~~q~~GRAGR~g~~~~G~~~l~--~~~~~~~~~ 191 (201)
T d2p6ra4 120 NIKVVVATPTL------AAGVNLPARRVIVRSLYRFDGYSKRIKVSEYKQMAGRAGRPGMDERGEAIII--VGKRDREIA 191 (201)
T ss_dssp SCCEEEECSTT------TSSSCCCBSEEEECCSEEESSSEEECCHHHHHHHHTTBSCTTTCSCEEEEEE--CCGGGHHHH
T ss_pred CceEEEechHH------HhhcCCCCceEEEecceeccCCcCCCCHHHHHHHhcccCCCCCCCeeEEEEE--eCCCChHHH
Confidence 79999999742 256777766666643 22222235556666655532 122 3333 333334445
Q ss_pred HHHhhc
Q 011963 376 VQNLLL 381 (474)
Q Consensus 376 ~~~~l~ 381 (474)
.++++.
T Consensus 192 ~k~~~~ 197 (201)
T d2p6ra4 192 VKRYIF 197 (201)
T ss_dssp HHTTTS
T ss_pred HHHHhc
Confidence 666654
No 88
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=83.53 E-value=5.9 Score=33.61 Aligned_cols=119 Identities=11% Similarity=0.017 Sum_probs=62.0
Q ss_pred CcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHH---------HHHHHHHHhcccCCcEEEE
Q 011963 218 KDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKA---------AKVRSVCKPLKAFGIHTVS 288 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa---------~Qi~~~~~~l~~~~i~v~~ 288 (474)
.+++++.|.| .|||.. +--+...+....- .....+.+.+-|.+.+-+| ..+...+..+....-.++.
T Consensus 44 ~n~lLvG~pG-VGKTal-v~~LA~ri~~~~v--p~~L~~~~i~~ld~~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iIL 119 (195)
T d1jbka_ 44 NNPVLIGEPG-VGKTAI-VEGLAQRIINGEV--PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 119 (195)
T ss_dssp CEEEEECCTT-SCHHHH-HHHHHHHHHHTCS--CGGGTTCEEEEECHHHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEE
T ss_pred CCeEEEecCC-cccHHH-HHHHHHHHHhCCC--CHHHcCceEEEeeHHHHhccCCccHHHHHHHHHHHHHHhcCCCcEEE
Confidence 3999999999 999943 2333444443211 1112344544444444332 2233344444222111222
Q ss_pred E-------------ecCCCH-HHHHHHHhcCCCcEE-EEChHHHHHHHHcCCCCCCCcceEEecccc
Q 011963 289 L-------------HPGAAI-DHQITGLRSCEPEFL-VSTPERLLKLVSLKAIDVSGVSLLVVDRLD 340 (474)
Q Consensus 289 ~-------------~gg~~~-~~q~~~l~~~~~~Il-V~TP~rL~~ll~~~~~~l~~l~~lViDEad 340 (474)
+ .|+.+. +-....|.++...+| -+||+....++....--.+.+..+.|+|-+
T Consensus 120 fIDeih~l~~~g~~~g~~d~~~~Lkp~L~rg~l~~IgatT~eey~~~~e~d~aL~rrF~~I~V~Ep~ 186 (195)
T d1jbka_ 120 FIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 186 (195)
T ss_dssp EEETGGGGTT------CCCCHHHHHHHHHTTSCCEEEEECHHHHHHHTTTCHHHHTTEEEEECCCCC
T ss_pred EcchHHHHhcCCCCCCcccHHHHHHHHHhCCCceEEecCCHHHHHHHHHcCHHHHhcCCEeecCCCC
Confidence 1 122232 223345556556655 578898888877654445677888888865
No 89
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=82.79 E-value=0.7 Score=40.50 Aligned_cols=16 Identities=6% Similarity=-0.141 Sum_probs=14.1
Q ss_pred CcEEEEcCCCcchhHHH
Q 011963 218 KDILETSGSSSTIVQIA 234 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTla 234 (474)
..+++..|+| +|||.+
T Consensus 44 ~~lll~GppG-tGKT~l 59 (276)
T d1fnna2 44 PRATLLGRPG-TGKTVT 59 (276)
T ss_dssp CEEEEECCTT-SSHHHH
T ss_pred CceEEECCCC-CCHHHH
Confidence 5799999999 999964
No 90
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=81.86 E-value=2.8 Score=33.78 Aligned_cols=87 Identities=6% Similarity=0.053 Sum_probs=47.1
Q ss_pred CCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc-ccCCcEEEEEecCCCH
Q 011963 217 AKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAI 295 (474)
Q Consensus 217 g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~ 295 (474)
|.=-+++.|.. |||| +.+|-.+.+... .+-.++++-|...= +..-..+ ...|...
T Consensus 7 G~l~lI~GpMf-SGKT-teLi~~~~~~~~---------~g~~vl~i~~~~D~----Ry~~~~i~sh~g~~~--------- 62 (141)
T d1xx6a1 7 GWVEVIVGPMY-SGKS-EELIRRIRRAKI---------AKQKIQVFKPEIDN----RYSKEDVVSHMGEKE--------- 62 (141)
T ss_dssp CEEEEEECSTT-SSHH-HHHHHHHHHHHH---------TTCCEEEEEEC-----------CEEECTTSCEE---------
T ss_pred eeEEEEEeccc-cHHH-HHHHHHHHHhhh---------cCCcEEEEEecccc----ccccceeeecccceE---------
Confidence 44346689999 9999 555555544433 35589999995431 1001111 1112221
Q ss_pred HHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC
Q 011963 296 DHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK 344 (474)
Q Consensus 296 ~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~ 344 (474)
+-+.+.+...+..++ ..+.+++.||||+-+-+
T Consensus 63 -----------~a~~~~~~~~~~~~~------~~~~dvI~IDE~QFf~d 94 (141)
T d1xx6a1 63 -----------QAVAIKNSREILKYF------EEDTEVIAIDEVQFFDD 94 (141)
T ss_dssp -----------ECEEESSSTHHHHHC------CTTCSEEEECSGGGSCT
T ss_pred -----------EEEEecchhhhhhhh------cccccEEEEeehhhccc
Confidence 224444444443332 34578999999998876
No 91
>d1nkta4 c.37.1.19 (A:397-615) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=80.65 E-value=1.7 Score=37.68 Aligned_cols=47 Identities=13% Similarity=0.117 Sum_probs=40.8
Q ss_pred chhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc
Q 011963 410 DEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461 (474)
Q Consensus 410 ~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~ 461 (474)
...|+..+.+-+..+... +.|+||.+.|.+..+.|+.+|...|++..
T Consensus 16 ~~~K~~Avv~ei~~~h~~-----GqPVLVGT~SVe~SE~lS~lL~~~gi~h~ 62 (219)
T d1nkta4 16 EEAKYIAVVDDVAERYAK-----GQPVLIGTTSVERSEYLSRQFTKRRIPHN 62 (219)
T ss_dssp HHHHHHHHHHHHHHHHHT-----TCCEEEEESCHHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHHHHHHhc-----CCCEEEeeCcHHHHHHHHHHHHHhccchh
Confidence 567988887777777555 56999999999999999999999999876
No 92
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=79.68 E-value=4.9 Score=35.58 Aligned_cols=16 Identities=19% Similarity=0.125 Sum_probs=14.1
Q ss_pred CcEEEEcCCCcchhHHH
Q 011963 218 KDILETSGSSSTIVQIA 234 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTla 234 (474)
+.+|+..|.| +|||+.
T Consensus 46 ~~iLL~GppG-tGKT~l 61 (256)
T d1lv7a_ 46 KGVLMVGPPG-TGKTLL 61 (256)
T ss_dssp CEEEEECCTT-SCHHHH
T ss_pred CeEEeeCCCC-CCccHH
Confidence 6789999999 999964
No 93
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=76.52 E-value=0.98 Score=43.27 Aligned_cols=43 Identities=12% Similarity=0.029 Sum_probs=30.0
Q ss_pred HhCCCCccccCCCchhhHHHHHHHhcCC--cEEEEcCCCcchhHHHHHHHHHHHH
Q 011963 191 RHDGVEQDNPLFVNSWGIEFWKCYSSAK--DILETSGSSSTIVQIAWIVATAADS 243 (474)
Q Consensus 191 ~~~g~~~ptpi~~~~~Q~~~i~~~l~g~--dvl~~A~TG~SGKTlaf~lp~l~~l 243 (474)
..+||... |.+.|..++... =+|++.||| ||||-+. ..++..+
T Consensus 138 ~~LG~~~~--------~~~~l~~l~~~~~GliLvtGpTG-SGKSTTl-~~~l~~~ 182 (401)
T d1p9ra_ 138 HSLGMTAH--------NHDNFRRLIKRPHGIILVTGPTG-SGKSTTL-YAGLQEL 182 (401)
T ss_dssp GGSCCCHH--------HHHHHHHHHTSSSEEEEEECSTT-SCHHHHH-HHHHHHH
T ss_pred hhhcccHH--------HHHHHHHHHhhhhceEEEEcCCC-CCccHHH-HHHhhhh
Confidence 34576644 888888777664 588889999 9999654 3355544
No 94
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.49 E-value=8.2 Score=34.03 Aligned_cols=16 Identities=13% Similarity=-0.016 Sum_probs=13.5
Q ss_pred CcEEEEcCCCcchhHHH
Q 011963 218 KDILETSGSSSTIVQIA 234 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTla 234 (474)
+.+|+..|.| +|||+.
T Consensus 42 ~giLL~Gp~G-tGKT~l 57 (265)
T d1r7ra3 42 KGVLFYGPPG-CGKTLL 57 (265)
T ss_dssp CEEEEBCCTT-SSHHHH
T ss_pred CeEEEECCCC-CcchhH
Confidence 4579999999 999963
No 95
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.36 E-value=7.2 Score=30.75 Aligned_cols=35 Identities=3% Similarity=-0.240 Sum_probs=23.4
Q ss_pred EEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEecc
Q 011963 220 ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSS 265 (474)
Q Consensus 220 vl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~Pt 265 (474)
-+++.|.. ||||. .+|-.+.+... .+-.++++-|.
T Consensus 5 ~li~GpMf-sGKTt-~Li~~~~~~~~---------~g~~v~~ikp~ 39 (133)
T d1xbta1 5 QVILGPMF-SGKST-ELMRRVRRFQI---------AQYKCLVIKYA 39 (133)
T ss_dssp EEEECCTT-SCHHH-HHHHHHHHHHT---------TTCCEEEEEET
T ss_pred EEEEeccc-CHHHH-HHHHHHHHHHH---------cCCcEEEEecc
Confidence 46789999 99994 55555544333 24578888884
No 96
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.73 E-value=1.7 Score=35.25 Aligned_cols=26 Identities=8% Similarity=-0.032 Sum_probs=19.1
Q ss_pred CcEEEEcCCCcchhHHHHHHHHHHHHHH
Q 011963 218 KDILETSGSSSTIVQIAWIVATAADSIA 245 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTlaf~lp~l~~l~~ 245 (474)
|+|++..|.| ||||. .+--++..+..
T Consensus 2 k~v~ItG~~G-tGKTt-l~~~i~~~l~~ 27 (189)
T d2i3ba1 2 RHVFLTGPPG-VGKTT-LIHKASEVLKS 27 (189)
T ss_dssp CCEEEESCCS-SCHHH-HHHHHHHHHHH
T ss_pred cEEEEECCCC-CcHHH-HHHHHHHHHHH
Confidence 7899999999 99995 44445544544
No 97
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=74.07 E-value=1.9 Score=39.47 Aligned_cols=19 Identities=16% Similarity=0.003 Sum_probs=16.1
Q ss_pred cCCcEEEEcCCCcchhHHHH
Q 011963 216 SAKDILETSGSSSTIVQIAW 235 (474)
Q Consensus 216 ~g~dvl~~A~TG~SGKTlaf 235 (474)
..+.+|.+.||| +|||+..
T Consensus 48 ~~~~iLl~GPpG-~GKT~lA 66 (309)
T d1ofha_ 48 TPKNILMIGPTG-VGKTEIA 66 (309)
T ss_dssp CCCCEEEECCTT-SSHHHHH
T ss_pred CCceEEEECCCC-CCHHHHH
Confidence 457999999999 9999744
No 98
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=73.05 E-value=1.6 Score=39.93 Aligned_cols=38 Identities=24% Similarity=0.356 Sum_probs=32.3
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHH
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAID 296 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~ 296 (474)
+-++||.++||..|.++...+... |+++..++|+.+..
T Consensus 36 ggk~LVFcnSR~~aE~La~~L~~~---Gi~a~~~Hgglsq~ 73 (299)
T d1a1va2 36 GGRHLIFCHSKKKCDELAAKLVAL---GINAVAYYRGLDVS 73 (299)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHT---TCCEEEECTTSCGG
T ss_pred CCCEEEECCcHHHHHHHHHHHHHC---CCCEEEEeCCchHH
Confidence 448999999999999999887665 88999999997754
No 99
>d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=72.87 E-value=1.3 Score=34.55 Aligned_cols=39 Identities=13% Similarity=0.066 Sum_probs=32.6
Q ss_pred HHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc
Q 011963 419 QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461 (474)
Q Consensus 419 ~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~ 461 (474)
..|..+++.+ ..++||.|.|...++.|.+.|..+|+++.
T Consensus 24 ~~L~~~i~~~----~~~Vli~a~s~g~~erl~e~L~~~~i~~~ 62 (117)
T d2eyqa2 24 DALRKFLETF----DGPVVFSVESEGRREALGELLARIKIAPQ 62 (117)
T ss_dssp HHHHHHHTTC----CSCCCEEESSHHHHHHHHHHHGGGTCCCE
T ss_pred HHHHHHHHhC----CCeEEEEECCccHHHHHHHHHHHcCCCce
Confidence 5567777553 46899999999999999999999999875
No 100
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=72.38 E-value=7.7 Score=33.52 Aligned_cols=97 Identities=6% Similarity=0.011 Sum_probs=61.0
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHH---H
Q 011963 225 GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT---G 301 (474)
Q Consensus 225 ~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~---~ 301 (474)
... |||. .+++-++..+.. .+-++||.+..++-..-+...+... .|+.+..++|+++...... .
T Consensus 65 ~~~-S~K~-~~l~~~l~~~~~---------~g~kviIFs~~~~~~~~l~~~l~~~--~~~~~~~i~G~~~~~~R~~~i~~ 131 (244)
T d1z5za1 65 VRR-SGKM-IRTMEIIEEALD---------EGDKIAIFTQFVDMGKIIRNIIEKE--LNTEVPFLYGELSKKERDDIISK 131 (244)
T ss_dssp STT-CHHH-HHHHHHHHHHHH---------TTCCEEEEESCHHHHHHHHHHHHHH--HCSCCCEECTTSCHHHHHHHHHH
T ss_pred hhh-hhHH-HHHHHHHHhhcc---------cccceEEEeeceehHHHHHHHHHhh--ccceEEEEecccchhccchhhhh
Confidence 456 8895 445555555443 3558899999888776665555432 2677778999998765433 3
Q ss_pred Hhc-CCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccc
Q 011963 302 LRS-CEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL 339 (474)
Q Consensus 302 l~~-~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEa 339 (474)
... .++.++|+|+... ..+++|.....+|+=+.
T Consensus 132 F~~~~~~~vll~~~~~~-----g~Glnl~~a~~vi~~~~ 165 (244)
T d1z5za1 132 FQNNPSVKFIVLSVKAG-----GFGINLTSANRVIHFDR 165 (244)
T ss_dssp HHHCTTCCEEEEECCTT-----CCCCCCTTCSEEEECSC
T ss_pred hhccccchhcccccccc-----ccccccchhhhhhhcCc
Confidence 333 2478898887532 34567776666665443
No 101
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=71.91 E-value=1.1 Score=41.10 Aligned_cols=29 Identities=10% Similarity=0.122 Sum_probs=27.5
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCccc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~v~ 461 (474)
.+++||||+|..+++.++..|+..|+.|.
T Consensus 36 ~g~~~~F~~s~~~~~~~a~~L~~~g~~V~ 64 (299)
T d1yksa2 36 KRPTAWFLPSIRAANVMAASLRKAGKSVV 64 (299)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhcCCeEE
Confidence 67999999999999999999999999886
No 102
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=68.79 E-value=2.9 Score=35.93 Aligned_cols=33 Identities=3% Similarity=-0.308 Sum_probs=23.2
Q ss_pred HHHHHHhcC-----CcEEEEcCCCcchhHHHHHHHHHHHH
Q 011963 209 EFWKCYSSA-----KDILETSGSSSTIVQIAWIVATAADS 243 (474)
Q Consensus 209 ~~i~~~l~g-----~dvl~~A~TG~SGKTlaf~lp~l~~l 243 (474)
..+..++.| +=+++.+|+| |||| .|.+-++.+.
T Consensus 23 ~~LD~ll~GGlp~G~~~li~G~pG-sGKT-~~~lq~~~~~ 60 (254)
T d1pzna2 23 KSLDKLLGGGIETQAITEVFGEFG-SGKT-QLAHTLAVMV 60 (254)
T ss_dssp HHHHHHHTSSEESSEEEEEEESTT-SSHH-HHHHHHHHHT
T ss_pred HHHHHhhcCCccCCEEEEEEcCCC-CCHH-HHHHHHHHHh
Confidence 666777776 4688889999 9999 4555444433
No 103
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=68.01 E-value=2.5 Score=37.37 Aligned_cols=37 Identities=19% Similarity=0.113 Sum_probs=24.1
Q ss_pred CCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEe
Q 011963 217 AKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLV 263 (474)
Q Consensus 217 g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~ 263 (474)
|.=+++.++|| +||| +|++-++.++... .+..++|++
T Consensus 35 G~l~vi~G~~G-~GKT-~~~~~la~~~a~~--------~g~~v~~~s 71 (277)
T d1cr2a_ 35 GEVIMVTSGSG-MGKS-TFVRQQALQWGTA--------MGKKVGLAM 71 (277)
T ss_dssp TCEEEEECSTT-SSHH-HHHHHHHHHHHHT--------SCCCEEEEE
T ss_pred CeEEEEEeCCC-CCHH-HHHHHHHHhhhhh--------cccceeEee
Confidence 34567888999 9999 4555555444322 355677776
No 104
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=67.51 E-value=1.6 Score=40.31 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=20.4
Q ss_pred HHHHHHHHcCCCCCCCcceEEeccccccCC--hhHHHHHH
Q 011963 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSK--GDTLSLIR 352 (474)
Q Consensus 315 ~rL~~ll~~~~~~l~~l~~lViDEad~ll~--~~~l~~Il 352 (474)
+.|.+.+.... -..+++||+|.+-. ...+..++
T Consensus 115 ~~l~~~~~~~p-----~~Vvl~DEieK~~~~v~~~ll~~l 149 (315)
T d1qvra3 115 GQLTEAVRRRP-----YSVILFDEIEKAHPDVFNILLQIL 149 (315)
T ss_dssp -CHHHHHHHCS-----SEEEEESSGGGSCHHHHHHHHHHH
T ss_pred ChHHHHHHhCC-----CcEEEEehHhhcCHHHHHHHHHHh
Confidence 45666665432 34799999999874 44444444
No 105
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}
Probab=66.79 E-value=8.6 Score=33.90 Aligned_cols=86 Identities=14% Similarity=0.059 Sum_probs=57.7
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||+..++|-|+.+|.. +.. .|-.+++..-+.+-..++.+.+......+.++..+..+..
T Consensus 3 L~gK~alVTGas~GIG~aia~~------la~---------~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs 67 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAIL------FAQ---------EGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHH------HHH---------TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTT
T ss_pred CCCCEEEEeCcCcHHHHHHHHH------HHH---------CCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCC
Confidence 5788888887766677765543 222 3678888888888888888888776444556777777766
Q ss_pred HHHHHHHHh------cCCCcEEEEChH
Q 011963 295 IDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
...+...+- -+++||||...|
T Consensus 68 ~~~~v~~~~~~~~~~~g~iDilvnnAG 94 (272)
T d1xkqa_ 68 TEDGQDQIINSTLKQFGKIDVLVNNAG 94 (272)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCceEEEeCCc
Confidence 544443331 147999997765
No 106
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=66.67 E-value=0.45 Score=44.42 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=24.7
Q ss_pred ceEEeccccccCC-----------hhHHHHHHhhC---CCCCcEEEEEccCCc
Q 011963 332 SLLVVDRLDSLSK-----------GDTLSLIRQSI---SGKPHTVVFNDCLTY 370 (474)
Q Consensus 332 ~~lViDEad~ll~-----------~~~l~~Il~~l---~~~~q~llfSAT~~~ 370 (474)
..|.|||+|.+.. ...+..++..+ .....++++-||-|.
T Consensus 184 ~ilf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~~ 236 (321)
T d1w44a_ 184 RVIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNPT 236 (321)
T ss_dssp SEEEEECCTTTC-----------CCHHHHHHHHHHHHHHHHHTCEEEEECCCC
T ss_pred cEEEeehhhhhccccccCCCCCcchhhhhhhhhhccccccCCCeEEEEeCCCc
Confidence 3899999999975 23344444333 233457888888764
No 107
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=66.28 E-value=20 Score=32.50 Aligned_cols=74 Identities=8% Similarity=-0.012 Sum_probs=42.0
Q ss_pred CcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC------hhHHHHHHhhCCC-----CCcEEEEEccCCccHHHH
Q 011963 307 PEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK------GDTLSLIRQSISG-----KPHTVVFNDCLTYTSVPA 375 (474)
Q Consensus 307 ~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~------~~~l~~Il~~l~~-----~~q~llfSAT~~~~v~~l 375 (474)
.-|+|.+|+.--+.-..+..-+.--+++||-=+|.-.. ..++...+..++. .++++..||.-..-+.++
T Consensus 170 ~~l~v~~P~~Gd~iq~~k~gi~e~aDi~VvNKaD~~~~~~~~~~~~~~~~al~~~~~~~~~w~p~V~~~SA~~g~Gi~eL 249 (327)
T d2p67a1 170 CFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEI 249 (327)
T ss_dssp EEEEEECC------CCCCHHHHHHCSEEEECCCCTTCHHHHHHHHHHHHHHHHHSCCSBTTBCCEEEECBGGGTBSHHHH
T ss_pred eEEEEecCCCchhhhhhchhhhccccEEEEEeecccchHHHHHHHHHHHHHhhhcccCCCCCcceeEEEEeeCCCCHHHH
Confidence 45777788765332111111122345788888875543 4455666666643 367999999988888877
Q ss_pred HHHhh
Q 011963 376 VQNLL 380 (474)
Q Consensus 376 ~~~~l 380 (474)
...+.
T Consensus 250 ~~~I~ 254 (327)
T d2p67a1 250 WHAII 254 (327)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 108
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=65.93 E-value=1.3 Score=43.14 Aligned_cols=19 Identities=16% Similarity=0.003 Sum_probs=16.0
Q ss_pred cCCcEEEEcCCCcchhHHHH
Q 011963 216 SAKDILETSGSSSTIVQIAW 235 (474)
Q Consensus 216 ~g~dvl~~A~TG~SGKTlaf 235 (474)
.-+|+|.+.||| +|||+-.
T Consensus 48 ~ksNILliGPTG-vGKTlLA 66 (443)
T d1g41a_ 48 TPKNILMIGPTG-VGKTEIA 66 (443)
T ss_dssp CCCCEEEECCTT-SSHHHHH
T ss_pred ccccEEEECCCC-CCHHHHH
Confidence 346999999999 9999744
No 109
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.79 E-value=15 Score=31.87 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=57.3
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.|+-+||+..++|-|+.+|..+. . .|..++++.-+.+-+.++...+... +-++..+..+..
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la------~---------~G~~V~l~~r~~~~l~~~~~~~~~~---~~~~~~~~~Dvs 66 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFA------K---------LKSKLVLWDINKHGLEETAAKCKGL---GAKVHTFVVDCS 66 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH------H---------TTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH------H---------CCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCC
Confidence 578999998877778887766432 2 4778888888888777777777654 455666666766
Q ss_pred HHHHHHHH------hcCCCcEEEEChH
Q 011963 295 IDHQITGL------RSCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l------~~~~~~IlV~TP~ 315 (474)
..+....+ .-+.+||||..-|
T Consensus 67 ~~~~v~~~~~~i~~~~g~idilinnag 93 (244)
T d1yb1a_ 67 NREDIYSSAKKVKAEIGDVSILVNNAG 93 (244)
T ss_dssp CHHHHHHHHHHHHHHTCCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCceeEeecc
Confidence 54443332 2346999997765
No 110
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}
Probab=63.87 E-value=11 Score=33.34 Aligned_cols=86 Identities=9% Similarity=-0.012 Sum_probs=57.0
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||+..++|-|+..|- .+.. .|-.+++..-+.+-+.++...+......+.++..+..+..
T Consensus 2 L~gK~alITGas~GIG~aia~------~la~---------~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~ 66 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAV------IFAK---------EGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 66 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHH------HHHH---------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHH------HHHH---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCC
Confidence 468888888776656665443 2333 3678888887888888888888776444556777777766
Q ss_pred HHHHHHHHh------cCCCcEEEEChH
Q 011963 295 IDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
...+...+- -+++||||...|
T Consensus 67 ~~~~v~~~~~~~~~~~G~iDilVnnAG 93 (274)
T d1xhla_ 67 EASGQDDIINTTLAKFGKIDILVNNAG 93 (274)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCceEEEeecc
Confidence 554443331 246899998765
No 111
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=63.36 E-value=2.3 Score=33.51 Aligned_cols=29 Identities=10% Similarity=0.162 Sum_probs=26.8
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCccc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~v~ 461 (474)
..+++|||.+..++...+..|...||++.
T Consensus 80 ~~~ivl~C~~G~rS~~aa~~L~~~G~~v~ 108 (130)
T d1yt8a4 80 GARLVLVDDDGVRANMSASWLAQMGWQVA 108 (130)
T ss_dssp TCEEEEECSSSSHHHHHHHHHHHTTCEEE
T ss_pred cceEEeecCCCccHHHHHHHHHHcCCCeE
Confidence 67999999999999999999999999764
No 112
>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=62.71 E-value=19 Score=30.64 Aligned_cols=39 Identities=8% Similarity=0.095 Sum_probs=30.9
Q ss_pred HHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc
Q 011963 419 QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461 (474)
Q Consensus 419 ~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~ 461 (474)
..+..++..+ ..+..|||.+...+..+...|...|+.+.
T Consensus 169 ~~~~~ll~~~----~~~~ai~~~~d~~a~g~~~~l~~~g~~vp 207 (282)
T d1dbqa_ 169 RAMQQILSQP----HRPTAVFCGGDIMAMGALCAADEMGLRVP 207 (282)
T ss_dssp HHHHHHHTSS----SCCSEEEESCHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHhCC----CCCceEEEecchhhhhHHHHHHhccCCCC
Confidence 4555666554 46789999999999999999999998753
No 113
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=61.68 E-value=8.3 Score=31.80 Aligned_cols=80 Identities=14% Similarity=0.056 Sum_probs=42.7
Q ss_pred cCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEecc-HHHHHHHHHHHHhc-ccCCcEEEEEecCC
Q 011963 216 SAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSS-QEKAAKVRSVCKPL-KAFGIHTVSLHPGA 293 (474)
Q Consensus 216 ~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~Pt-reLa~Qi~~~~~~l-~~~~i~v~~~~gg~ 293 (474)
.++.+++..--| +|+..+|.+--. ++..|+|+.. .+-+......++.+ ...+..+ .+..-.
T Consensus 17 ~~k~vlIlGaGG-aarai~~al~~~---------------g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ 79 (182)
T d1vi2a1 17 KGKTMVLLGAGG-ASTAIGAQGAIE---------------GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVV-TVTDLA 79 (182)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHHT---------------TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEE-EEEETT
T ss_pred CCCEEEEECCcH-HHHHHHHHHhhc---------------CCceEeeeccchHHHHHHHHHHHHHHhhcCcce-Eeeecc
Confidence 567788777666 898876654332 5556666543 23334444455555 2233332 233333
Q ss_pred CHHHHHHHHhcCCCcEEE-ECh
Q 011963 294 AIDHQITGLRSCEPEFLV-STP 314 (474)
Q Consensus 294 ~~~~q~~~l~~~~~~IlV-~TP 314 (474)
....-...+. .+|||| +||
T Consensus 80 ~~~~~~~~~~--~~diiIN~Tp 99 (182)
T d1vi2a1 80 DQQAFAEALA--SADILTNGTK 99 (182)
T ss_dssp CHHHHHHHHH--TCSEEEECSS
T ss_pred cccchhhhhc--ccceeccccC
Confidence 3333333343 589998 666
No 114
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=61.56 E-value=4.5 Score=32.17 Aligned_cols=22 Identities=9% Similarity=-0.138 Sum_probs=14.1
Q ss_pred EEEEcCCCcchhHHHHHHHHHHHH
Q 011963 220 ILETSGSSSTIVQIAWIVATAADS 243 (474)
Q Consensus 220 vl~~A~TG~SGKTlaf~lp~l~~l 243 (474)
+.++.+.| |||| +++--++..+
T Consensus 5 i~itG~~G-SGKT-TL~~~L~~~l 26 (170)
T d1np6a_ 5 LAFAAWSG-TGKT-TLLKKLIPAL 26 (170)
T ss_dssp EEEECCTT-SCHH-HHHHHHHHHH
T ss_pred EEEEcCCC-CCHH-HHHHHHHHHH
Confidence 56778999 9999 4433344333
No 115
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=61.41 E-value=3.9 Score=36.24 Aligned_cols=55 Identities=15% Similarity=0.186 Sum_probs=42.8
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEECh
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP 314 (474)
+-++||.+|++.-+..++..+... ++.+..++|+.... .......+..+++|+|.
T Consensus 178 ~~~~lvf~~~~~~~~~l~~~L~~~---~~~~~~l~~~~~~~-~~~~~~~~~~~~lvaT~ 232 (305)
T d2bmfa2 178 KGKTVWFVPSIKAGNDIAACLRKN---GKKVIQLSRKTFDS-EYIKTRTNDWDFVVTTD 232 (305)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHH---TCCCEECCTTCHHH-HGGGGGTSCCSEEEECG
T ss_pred CCCEEEEeccHHHHHHHHHHHHhC---CCCEEEeCCcChHH-HHhhhhccchhhhhhhH
Confidence 457899999999998888887765 66778889887544 34455666899999997
No 116
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=60.70 E-value=64 Score=29.69 Aligned_cols=139 Identities=9% Similarity=0.009 Sum_probs=66.2
Q ss_pred HHHHHHHhcC--CcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHH-----HHH----HHH
Q 011963 208 IEFWKCYSSA--KDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAA-----KVR----SVC 276 (474)
Q Consensus 208 ~~~i~~~l~g--~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~-----Qi~----~~~ 276 (474)
.+.+..+... .++|++.|.| .|||.. +--+...+.... .+....+.+.+.|-+.+=+|- |.. ..+
T Consensus 32 ~~~~~~L~r~~k~n~llvG~~G-vGKtai-v~~la~~i~~~~--vp~~l~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~ 107 (387)
T d1qvra2 32 RRVIQILLRRTKNNPVLIGEPG-VGKTAI-VEGLAQRIVKGD--VPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVI 107 (387)
T ss_dssp HHHHHHHHCSSCCCCEEEECTT-SCHHHH-HHHHHHHHHHTC--SCTTSTTCEEEEECC-----------CHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCeEECCCC-CCHHHH-HHHHHHHHHhCC--CCHHHcCceEEEeeHhhhhcccCcchhHHHHHHHHH
Confidence 3444444433 3899999999 999953 223334444421 112224556566655555542 222 233
Q ss_pred HhcccC-C-cEE-----EEEec------CCCH-HHHHHHHhcCCCcEE-EEChHHHHHHHHcCCCCCCCcceEEeccccc
Q 011963 277 KPLKAF-G-IHT-----VSLHP------GAAI-DHQITGLRSCEPEFL-VSTPERLLKLVSLKAIDVSGVSLLVVDRLDS 341 (474)
Q Consensus 277 ~~l~~~-~-i~v-----~~~~g------g~~~-~~q~~~l~~~~~~Il-V~TP~rL~~ll~~~~~~l~~l~~lViDEad~ 341 (474)
..+... | +-. ..++| +.+. +-....|.++.+.+| -+||+-... +....-....++.+-|+|-+
T Consensus 108 ~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~~ey~~-~e~d~al~rrF~~v~v~ep~- 185 (387)
T d1qvra2 108 QEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPT- 185 (387)
T ss_dssp HHHHTTCSSEEEEECCC-------------------HHHHHTTCCCEEEEECHHHHHH-HTTCTTTCSCCCCEEECCCC-
T ss_pred HHhccCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhCCCcceeeecCHHHHHH-hcccHHHHHhcccccCCCCc-
Confidence 333222 2 111 11222 1121 122334566566655 667887765 45544446789999999987
Q ss_pred cCChhHHHHHHhhC
Q 011963 342 LSKGDTLSLIRQSI 355 (474)
Q Consensus 342 ll~~~~l~~Il~~l 355 (474)
.++...|+..+
T Consensus 186 ---~~~~~~il~~~ 196 (387)
T d1qvra2 186 ---VEETISILRGL 196 (387)
T ss_dssp ---HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHH
Confidence 44555555444
No 117
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=60.13 E-value=39 Score=30.67 Aligned_cols=98 Identities=10% Similarity=0.044 Sum_probs=62.8
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHH---HHH
Q 011963 225 GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQ---ITG 301 (474)
Q Consensus 225 ~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q---~~~ 301 (474)
+-. |||. ..+.-++..+... .+-++||++..+....-+...+... |+.+..+.|+++.... +..
T Consensus 97 ~~~-S~Kl-~~L~~ll~~~~~~--------~g~KvlIFs~~~~~ld~l~~~l~~~---g~~~~~l~G~~~~~~R~~~i~~ 163 (346)
T d1z3ix1 97 PQL-SGKM-LVLDYILAMTRTT--------TSDKVVLVSNYTQTLDLFEKLCRNR---RYLYVRLDGTMSIKKRAKIVER 163 (346)
T ss_dssp GGG-SHHH-HHHHHHHHHHHHH--------CCCEEEEEESCHHHHHHHHHHHHHH---TCCEEEECSSCCHHHHHHHHHH
T ss_pred ccc-CHHH-HHHHHHHHHHHHh--------cCCceeEEeehhhhhHHHHHHHhhh---hccccccccchhHHHHHHHHHh
Confidence 445 8996 4444555444332 3569999999888776666665554 7889999999986543 334
Q ss_pred HhcC--CCcEEEEChHHHHHHHHcCCCCCCCcceEEecccc
Q 011963 302 LRSC--EPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD 340 (474)
Q Consensus 302 l~~~--~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad 340 (474)
...+ ...|++.++... .-+++|.....+|+=+.+
T Consensus 164 F~~~~~~~~vlLls~~ag-----g~GlnL~~a~~vi~~d~~ 199 (346)
T d1z3ix1 164 FNNPSSPEFIFMLSSKAG-----GCGLNLIGANRLVMFDPD 199 (346)
T ss_dssp HHSTTCCCCEEEEEGGGS-----CTTCCCTTEEEEEECSCC
T ss_pred hhcccccceeeeecchhh-----hhccccccceEEEEecCC
Confidence 4432 234666665422 346888888888876544
No 118
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=59.60 E-value=21 Score=31.04 Aligned_cols=125 Identities=12% Similarity=0.043 Sum_probs=70.7
Q ss_pred HhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEe-ccHHHHHHHHHHHHhcccCCcEEEEEecC
Q 011963 214 YSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLV-SSQEKAAKVRSVCKPLKAFGIHTVSLHPG 292 (474)
Q Consensus 214 ~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~-PtreLa~Qi~~~~~~l~~~~i~v~~~~gg 292 (474)
-|.||=+||...++|-|+.+|.. +.. .|-.+++.. ...+++.++.+.++.. +.++..+..+
T Consensus 15 sL~gK~~lITGas~GIG~aia~~------la~---------~Ga~Vvi~~~~~~~~~~~~~~~~~~~---g~~~~~~~~D 76 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAME------LGR---------RGCKVIVNYANSTESAEEVVAAIKKN---GSDAACVKAN 76 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHH------HHH---------TTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHH------HHH---------cCCEEEEEeCCchHHHHHHHHHHHhh---CCceeeEeCC
Confidence 37899999988777678766543 222 355666654 3467777766665554 5566666666
Q ss_pred CCHHHHHHHH------hcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC------hhHHHHHHhhCCCCCc
Q 011963 293 AAIDHQITGL------RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK------GDTLSLIRQSISGKPH 360 (474)
Q Consensus 293 ~~~~~q~~~l------~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~------~~~l~~Il~~l~~~~q 360 (474)
....++...+ .-+++||+|...+. .....+.-+-.++.+.+++ ...++.++..+...-.
T Consensus 77 ~~~~~~v~~~~~~~~~~~g~idilV~nag~---------~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~ 147 (272)
T d1g0oa_ 77 VGVVEDIVRMFEEAVKIFGKLDIVCSNSGV---------VSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGR 147 (272)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCC---------CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCcccccccc---------chhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccc
Confidence 6544443332 11478999988652 1222233333455555554 3334445555554445
Q ss_pred EEEEE
Q 011963 361 TVVFN 365 (474)
Q Consensus 361 ~llfS 365 (474)
++.++
T Consensus 148 ~i~i~ 152 (272)
T d1g0oa_ 148 LILMG 152 (272)
T ss_dssp EEEEC
T ss_pred ccccc
Confidence 55554
No 119
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=58.87 E-value=5.9 Score=36.99 Aligned_cols=17 Identities=12% Similarity=0.030 Sum_probs=14.7
Q ss_pred CcEEEEcCCCcchhHHHH
Q 011963 218 KDILETSGSSSTIVQIAW 235 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTlaf 235 (474)
.++|.+.||| .|||...
T Consensus 69 ~niLfiGPTG-vGKTElA 85 (364)
T d1um8a_ 69 SNILLIGPTG-SGKTLMA 85 (364)
T ss_dssp CCEEEECCTT-SSHHHHH
T ss_pred cceeeeCCCC-ccHHHHH
Confidence 4799999999 9999654
No 120
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Probab=58.85 E-value=7.8 Score=32.18 Aligned_cols=81 Identities=11% Similarity=0.099 Sum_probs=50.3
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.|+-+++...+||-|+-+|-.+ .. .+..++++.-+.+-+.++...+..-....+ ..+ ...
T Consensus 21 l~gK~vlItGasgGIG~~ia~~l------a~---------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~--d~~ 81 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAALL------AG---------EGAEVVLCGRKLDKAQAAADSVNKRFKVNV--TAA--ETA 81 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHH------HH---------TTCEEEEEESSHHHHHHHHHHHHHHHTCCC--EEE--ECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHH------Hh---------hccchhhcccchHHHHHHHHHHHhccchhh--hhh--hcc
Confidence 47899999988876777665433 22 367888888888777777776655422222 111 222
Q ss_pred HHHHHHHHhcCCCcEEEEChH
Q 011963 295 IDHQITGLRSCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l~~~~~~IlV~TP~ 315 (474)
...+....-. ++||||.+.+
T Consensus 82 ~~~~~~~~~~-~iDilin~Ag 101 (191)
T d1luaa1 82 DDASRAEAVK-GAHFVFTAGA 101 (191)
T ss_dssp SHHHHHHHTT-TCSEEEECCC
T ss_pred cHHHHHHHhc-CcCeeeecCc
Confidence 2233444444 6899998754
No 121
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.63 E-value=3.5 Score=37.84 Aligned_cols=25 Identities=12% Similarity=-0.052 Sum_probs=18.9
Q ss_pred HHHHHhcCCc--EEEEcCCCcchhHHHH
Q 011963 210 FWKCYSSAKD--ILETSGSSSTIVQIAW 235 (474)
Q Consensus 210 ~i~~~l~g~d--vl~~A~TG~SGKTlaf 235 (474)
.++.++.|.+ +++..+|| ||||...
T Consensus 67 lv~~~l~G~n~~i~aYGqtg-SGKTyT~ 93 (323)
T d1bg2a_ 67 IVKDVLEGYNGTIFAYGQTS-SGKTHTM 93 (323)
T ss_dssp HHHHHHTTCCEEEEEECSTT-SSHHHHH
T ss_pred HHHHHHcCCCcceeeecccC-CCCceec
Confidence 4566788985 55556999 9999875
No 122
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=56.46 E-value=8.4 Score=36.18 Aligned_cols=58 Identities=12% Similarity=-0.012 Sum_probs=35.0
Q ss_pred CcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhc--CCCCCCcEEEEEeccHHHHHHHHHHH
Q 011963 218 KDILETSGSSSTIVQIAWIVATAADSIARKEKE--GFSFTGPFLLFLVSSQEKAAKVRSVC 276 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~--~~~~~~~~alil~PtreLa~Qi~~~~ 276 (474)
..+||.|+-| ||||.+-.-=++..|....... ......-..|+|+=|+.=|..+.+.+
T Consensus 17 g~~lv~A~AG-sGKT~~l~~r~~~ll~~~~~~~~~~~~~~~~~IL~lTFT~kAA~Emk~RI 76 (485)
T d1w36b1 17 GERLIEASAG-TGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRI 76 (485)
T ss_dssp SCEEEECCTT-SCHHHHHHHHHHHHHTTCSSSSSCSSCCCGGGEEEEESCHHHHHHHHHHH
T ss_pred CCeEEEEcCc-hHHHHHHHHHHHHHHhhCcccccccCCCCcccEeEeccHHHHHHHHHHHH
Confidence 3589999999 9999876555555444322110 00011235788898887666655443
No 123
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=56.33 E-value=16 Score=31.77 Aligned_cols=84 Identities=14% Similarity=0.124 Sum_probs=53.7
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||...++|-|+.+|. .+.. .|-.+++..-..+-+.++.+.++.. +-++..+..+..
T Consensus 9 L~gK~alITGas~GIG~aia~------~la~---------~Ga~V~~~~r~~~~~~~~~~~l~~~---g~~~~~~~~Dvs 70 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAI------TFAT---------AGASVVVSDINADAANHVVDEIQQL---GGQAFACRCDIT 70 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHH------HHHT---------TTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHH------HHHH---------CCCEEEEEECCHHHHHHHHHHHHHc---CCcEEEEEccCC
Confidence 578888887666555654443 2222 3667777776777777777776655 445666777766
Q ss_pred HHHHHHHHh------cCCCcEEEEChHH
Q 011963 295 IDHQITGLR------SCEPEFLVSTPER 316 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~r 316 (474)
...+...+- -+++||||...|.
T Consensus 71 ~~~~~~~~~~~~~~~~g~iDilvnnAG~ 98 (255)
T d1fmca_ 71 SEQELSALADFAISKLGKVDILVNNAGG 98 (255)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEeeeCCcC
Confidence 544443331 1479999998873
No 124
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=55.29 E-value=7.4 Score=29.46 Aligned_cols=29 Identities=10% Similarity=0.035 Sum_probs=25.9
Q ss_pred CCCCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 431 ~~~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
....++|+||+|-.++-..+..|...|++
T Consensus 80 ~~~~~ii~yC~sG~~A~~~~~~L~~lG~~ 108 (120)
T d1urha2 80 SYDKPIIVSCGSGVTAAVVLLALATLDVP 108 (120)
T ss_dssp CSSSCEEEECCSSSTHHHHHHHHHHTTCS
T ss_pred CccCceEEEccchhHHHHHHHHHHHcCCC
Confidence 34679999999999999999999999995
No 125
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=55.02 E-value=3.7 Score=30.99 Aligned_cols=27 Identities=15% Similarity=0.186 Sum_probs=25.5
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
..++||||.+...+...+..|...||+
T Consensus 58 ~~~ivv~c~~g~rs~~~a~~L~~~G~~ 84 (108)
T d1gmxa_ 58 DTPVMVMCYHGNSSKGAAQYLLQQGYD 84 (108)
T ss_dssp TSCEEEECSSSSHHHHHHHHHHHHTCS
T ss_pred cCcccccCCCChHHHHHHHHHHHcCCC
Confidence 679999999999999999999999995
No 126
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=54.96 E-value=38 Score=30.48 Aligned_cols=111 Identities=13% Similarity=0.054 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhcccCCcEEEEE--ecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC-
Q 011963 268 KAAKVRSVCKPLKAFGIHTVSL--HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK- 344 (474)
Q Consensus 268 La~Qi~~~~~~l~~~~i~v~~~--~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~- 344 (474)
++..+...+..+...|+.++.+ +|.--....+..+. ..-|+|.+|+.=-++-..+.--+.--+++||-=+|..-.
T Consensus 128 ~~~~~~~~i~~~~~~g~d~iiiETVG~gq~e~~~~~~~--D~~v~v~~p~~GD~iQ~~k~gilE~aDi~vvNKaD~~~~~ 205 (323)
T d2qm8a1 128 VAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLT--DFFLVLMLPGAGDELQGIKKGIFELADMIAVNKADDGDGE 205 (323)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSSSCHHHHHTTS--SEEEEEECSCC------CCTTHHHHCSEEEEECCSTTCCH
T ss_pred hhHHHHHHHHhhccCCCCeEEEeehhhhhhhhhhhccc--ceEEEEeeccchhhhhhhhhhHhhhhheeeEeccccccch
Confidence 3444444444443345554333 23222222222222 456889999864333222333344567888888885543
Q ss_pred ------hhHHHHHHhhCC-----CCCcEEEEEccCCccHHHHHHHhh
Q 011963 345 ------GDTLSLIRQSIS-----GKPHTVVFNDCLTYTSVPAVQNLL 380 (474)
Q Consensus 345 ------~~~l~~Il~~l~-----~~~q~llfSAT~~~~v~~l~~~~l 380 (474)
...+..-+..++ ..++++..||.-..-+.++...+.
T Consensus 206 ~~~~~~~~~~~~~l~~~~~~~~~~~p~V~~~Sa~~g~Gi~el~~~I~ 252 (323)
T d2qm8a1 206 RRASAAASEYRAALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIE 252 (323)
T ss_dssp HHHHHHHHHHHHHHTTBCCSBTTBCCCEEEEBTTTTBSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcccccccCCCCceEEEEecCCCCHHHHHHHHH
Confidence 122233333332 357899999998888887776654
No 127
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=53.92 E-value=21 Score=30.92 Aligned_cols=87 Identities=13% Similarity=0.010 Sum_probs=56.0
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||+..++|-|+.+|.. +.. .|-.+++..-+.+-+.++...+......+-++..+..+..
T Consensus 3 l~gKvalVTGas~GIG~aia~~------la~---------~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt 67 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVL------FAR---------EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHH------HHH---------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT
T ss_pred CCCCEEEEeCcCCHHHHHHHHH------HHH---------CCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCC
Confidence 4678888876666566654432 333 3778777777778778888887776434455666777766
Q ss_pred HHHHHHHHh------cCCCcEEEEChHH
Q 011963 295 IDHQITGLR------SCEPEFLVSTPER 316 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~r 316 (474)
...+...+- -+++||||-..|.
T Consensus 68 ~~~~v~~~~~~~~~~~g~iDilvnnAG~ 95 (264)
T d1spxa_ 68 TDAGQDEILSTTLGKFGKLDILVNNAGA 95 (264)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCC-
T ss_pred CHHHHHHHHHHHHHHhCCCCEeeccccc
Confidence 554444331 2479999987664
No 128
>d2dria_ c.93.1.1 (A:) D-ribose-binding protein {Escherichia coli, strain k-12 [TaxId: 562]}
Probab=53.87 E-value=57 Score=27.04 Aligned_cols=26 Identities=15% Similarity=0.119 Sum_probs=22.3
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCC
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGY 458 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi 458 (474)
+...-|||.+...|..+...|...|.
T Consensus 181 ~~~~ai~~~~d~~a~g~~~al~~~g~ 206 (271)
T d2dria_ 181 PDVQAVFAQNDEMALGALRALQTAGK 206 (271)
T ss_dssp TTCCEEEESSHHHHHHHHHHHHHHTC
T ss_pred cCceEEecccHHHHHHHHHHHHHhCC
Confidence 46788999999999999999988774
No 129
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}
Probab=53.52 E-value=28 Score=30.17 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=52.6
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEecc-HHHHHHHHHHHHhcccCCcEEEEEecCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSS-QEKAAKVRSVCKPLKAFGIHTVSLHPGA 293 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~Pt-reLa~Qi~~~~~~l~~~~i~v~~~~gg~ 293 (474)
|.||-+||+..++|-|+.+|..| .. .|-.+++..-+ .+++.++.+.++.. +.++..+..+.
T Consensus 5 L~gK~alITGas~GIG~aia~~l------a~---------~G~~Vv~~~r~~~~~~~~~~~~~~~~---g~~~~~~~~Dv 66 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRF------AT---------EKAKVVVNYRSKEDEANSVLEEIKKV---GGEAIAVKGDV 66 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHH------HH---------TTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHH------HH---------CCCEEEEEeCCcHHHHHHHHHHHHhc---CCcEEEEEccC
Confidence 67888888766665676655432 22 36677766655 34666666666655 55677777776
Q ss_pred CHHHHHHHHh------cCCCcEEEEChH
Q 011963 294 AIDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 294 ~~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
....+...+- -+++||||-..|
T Consensus 67 t~~~~v~~~~~~~~~~~G~iDiLVnnAG 94 (261)
T d1geea_ 67 TVESDVINLVQSAIKEFGKLDVMINNAG 94 (261)
T ss_dssp TSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEeeccce
Confidence 6554443331 147999998876
No 130
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.00 E-value=24 Score=31.32 Aligned_cols=89 Identities=10% Similarity=0.067 Sum_probs=58.8
Q ss_pred HHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhc--ccCCcEEEEE
Q 011963 212 KCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL--KAFGIHTVSL 289 (474)
Q Consensus 212 ~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l--~~~~i~v~~~ 289 (474)
|-.|.||-+||+..++|-|+.+|.. +.. .|-.+++..-+.+-..+..+.+..- ...+.++..+
T Consensus 7 ~g~L~gKvalITGas~GIG~aia~~------la~---------~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~ 71 (297)
T d1yxma1 7 PGLLQGQVAIVTGGATGIGKAIVKE------LLE---------LGSNVVIASRKLERLKSAADELQANLPPTKQARVIPI 71 (297)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHH------HHH---------TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEE
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHH------HHH---------CCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEE
Confidence 3458999999987776677654432 333 3667777777777777777777653 2336778888
Q ss_pred ecCCCHHHHHHHHh------cCCCcEEEEChH
Q 011963 290 HPGAAIDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 290 ~gg~~~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
..+..-..++..+- -+++||||...+
T Consensus 72 ~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg 103 (297)
T d1yxma1 72 QCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG 103 (297)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred eccCCCHHHHHHHHHHHHHHhCCeEEEEeecc
Confidence 88877555544331 247999997654
No 131
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=52.94 E-value=3.6 Score=31.64 Aligned_cols=28 Identities=7% Similarity=0.137 Sum_probs=25.5
Q ss_pred CCCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 432 ~~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
+..++||||++-.++...+..|...||.
T Consensus 71 ~~~~iv~~C~~G~rs~~a~~~L~~~G~~ 98 (119)
T d1tq1a_ 71 QSDNIIVGCQSGGRSIKATTDLLHAGFT 98 (119)
T ss_dssp TTSSEEEEESSCSHHHHHHHHHHHHHCC
T ss_pred CCcEEEEEcCCcCcHHHHHHHHHhcccC
Confidence 3679999999999999999999999994
No 132
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}
Probab=52.47 E-value=30 Score=29.82 Aligned_cols=83 Identities=16% Similarity=0.159 Sum_probs=51.7
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||...++|-|+.+|- .+.. .|-.++++.-+.+-+.++...+... +.++..+..+..
T Consensus 3 L~gK~alITGas~GIG~aia~------~la~---------~Ga~V~~~~r~~~~l~~~~~~~~~~---g~~~~~~~~Dv~ 64 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATAL------RLAE---------EGTAIALLDMNREALEKAEASVREK---GVEARSYVCDVT 64 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHH------HHHH---------TTCEEEEEESCHHHHHHHHHHHHTT---TSCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHH------HHHH---------CCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCC
Confidence 578888998777656665443 2333 3667777766666666666555543 566777777765
Q ss_pred HHHHHHHH------hcCCCcEEEEChH
Q 011963 295 IDHQITGL------RSCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l------~~~~~~IlV~TP~ 315 (474)
...+...+ .-+++||||...|
T Consensus 65 ~~~~v~~~~~~~~~~~g~iDilVnnaG 91 (260)
T d1zema1 65 SEEAVIGTVDSVVRDFGKIDFLFNNAG 91 (260)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCeehhhhc
Confidence 44443333 1247999997655
No 133
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}
Probab=50.63 E-value=35 Score=29.38 Aligned_cols=83 Identities=12% Similarity=0.058 Sum_probs=52.1
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
|.|+-+||+..++|-|+-+|- .+.. .|-.++++.-+.+-+..+.+.+... +..+..+..+..
T Consensus 4 L~gK~alITGas~GIG~aia~------~la~---------~G~~V~i~~r~~~~l~~~~~~~~~~---~~~~~~~~~D~s 65 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVE------ELAG---------LGARVYTCSRNEKELDECLEIWREK---GLNVEGSVCDLL 65 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHH------HHHH---------TTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHH------HHHH---------CCCEEEEEECCHHHHHHHHHHHHhc---CCCceEEEeecC
Confidence 578999999877766765443 2333 3778888887776666655555444 455556666666
Q ss_pred HHHHHHHH-------hcCCCcEEEEChH
Q 011963 295 IDHQITGL-------RSCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l-------~~~~~~IlV~TP~ 315 (474)
...+...+ ..+.++|||...|
T Consensus 66 ~~~~~~~~~~~~~~~~~g~idilinnag 93 (258)
T d1ae1a_ 66 SRTERDKLMQTVAHVFDGKLNILVNNAG 93 (258)
T ss_dssp CHHHHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEecccc
Confidence 54443322 1135889998765
No 134
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=50.41 E-value=3.1 Score=32.66 Aligned_cols=17 Identities=6% Similarity=-0.023 Sum_probs=14.4
Q ss_pred CCcEEEEcCCCcchhHHH
Q 011963 217 AKDILETSGSSSTIVQIA 234 (474)
Q Consensus 217 g~dvl~~A~TG~SGKTla 234 (474)
-|.++++.|.| ||||..
T Consensus 2 ~k~I~l~G~~G-sGKSTv 18 (169)
T d1kaga_ 2 KRNIFLVGPMG-AGKSTI 18 (169)
T ss_dssp CCCEEEECCTT-SCHHHH
T ss_pred CCeEEEECCCC-CCHHHH
Confidence 36899999999 999953
No 135
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=50.39 E-value=5.2 Score=37.28 Aligned_cols=25 Identities=0% Similarity=-0.126 Sum_probs=18.5
Q ss_pred HHHHHhcCCcE--EEEcCCCcchhHHHH
Q 011963 210 FWKCYSSAKDI--LETSGSSSTIVQIAW 235 (474)
Q Consensus 210 ~i~~~l~g~dv--l~~A~TG~SGKTlaf 235 (474)
.+..++.|.+. ++..+|| ||||...
T Consensus 105 lv~~~l~G~n~tifaYGqTG-SGKTyTm 131 (362)
T d1v8ka_ 105 LVQTIFEGGKATCFAYGQTG-SGKTHTM 131 (362)
T ss_dssp HHHHHHTTCEEEEEEEESTT-SSHHHHH
T ss_pred HHHHHHhccCceEEeeccCC-CCCceee
Confidence 34667888864 4456999 9999875
No 136
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=50.20 E-value=4.5 Score=37.83 Aligned_cols=26 Identities=4% Similarity=-0.027 Sum_probs=19.8
Q ss_pred HHHHHHhcCCc--EEEEcCCCcchhHHHH
Q 011963 209 EFWKCYSSAKD--ILETSGSSSTIVQIAW 235 (474)
Q Consensus 209 ~~i~~~l~g~d--vl~~A~TG~SGKTlaf 235 (474)
..++.++.|.+ +++..+|| ||||...
T Consensus 115 plv~~vl~G~n~ti~aYGqtG-SGKT~Tm 142 (368)
T d2ncda_ 115 PLIQSALDGYNICIFAYGQTG-SGKTYTM 142 (368)
T ss_dssp HHHHHHHTTCEEEEEEECSTT-SSHHHHH
T ss_pred HHHHHHhcccceeEEeeccCC-CccceEe
Confidence 35677889986 45556999 9999774
No 137
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=50.02 E-value=5.2 Score=37.10 Aligned_cols=25 Identities=0% Similarity=-0.141 Sum_probs=18.8
Q ss_pred HHHHHhcCCc--EEEEcCCCcchhHHHH
Q 011963 210 FWKCYSSAKD--ILETSGSSSTIVQIAW 235 (474)
Q Consensus 210 ~i~~~l~g~d--vl~~A~TG~SGKTlaf 235 (474)
.+..++.|.+ +++..+|| ||||...
T Consensus 71 lv~~~l~G~n~ti~aYG~tg-SGKT~Tm 97 (354)
T d1goja_ 71 TVDDILNGYNGTVFAYGQTG-AGKSYTM 97 (354)
T ss_dssp HHHHHTTTCCEEEEEECSTT-SSHHHHH
T ss_pred HHHHhhccCceeEEecccCC-CCcceee
Confidence 4456688986 55557999 9999774
No 138
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=50.00 E-value=4.6 Score=37.73 Aligned_cols=25 Identities=0% Similarity=-0.017 Sum_probs=19.2
Q ss_pred HHHHHhcCCcE--EEEcCCCcchhHHHH
Q 011963 210 FWKCYSSAKDI--LETSGSSSTIVQIAW 235 (474)
Q Consensus 210 ~i~~~l~g~dv--l~~A~TG~SGKTlaf 235 (474)
.+..++.|.|. ++-.+|| ||||.+.
T Consensus 66 lv~~~l~G~n~~i~aYGqTG-SGKTyTm 92 (364)
T d1sdma_ 66 LVQSAVDGYNVCIFAYGQTG-SGKTFTI 92 (364)
T ss_dssp HHHHHHTTCEEEEEEECSTT-SSHHHHH
T ss_pred HHHHHhcCCceeeeccccCC-CCccccc
Confidence 46778899864 4456999 9999875
No 139
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.41 E-value=4.3 Score=33.26 Aligned_cols=32 Identities=9% Similarity=-0.265 Sum_probs=21.8
Q ss_pred hHHHHHHHhcC-----CcEEEEcCCCcchhHHHHHHHHH
Q 011963 207 GIEFWKCYSSA-----KDILETSGSSSTIVQIAWIVATA 240 (474)
Q Consensus 207 Q~~~i~~~l~g-----~dvl~~A~TG~SGKTlaf~lp~l 240 (474)
....+..++.| +=+++.+|+| ||||. |++-++
T Consensus 8 G~~~LD~ll~GGi~~G~v~~i~G~~G-sGKT~-l~l~la 44 (242)
T d1n0wa_ 8 GSKELDKLLQGGIETGSITEMFGEFR-TGKTQ-ICHTLA 44 (242)
T ss_dssp SCHHHHHHTTTSEETTSEEEEECCTT-SSHHH-HHHHHH
T ss_pred CCHHHHHhhcCCCcCCEEEEEEeCCC-CCHHH-HHHHHH
Confidence 34566777764 4678888999 99994 444344
No 140
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=49.36 E-value=5.6 Score=36.78 Aligned_cols=25 Identities=4% Similarity=-0.053 Sum_probs=18.5
Q ss_pred HHHHHhcCCc--EEEEcCCCcchhHHHH
Q 011963 210 FWKCYSSAKD--ILETSGSSSTIVQIAW 235 (474)
Q Consensus 210 ~i~~~l~g~d--vl~~A~TG~SGKTlaf 235 (474)
.++.++.|.+ +++..+|| ||||.+.
T Consensus 78 lv~~~l~G~n~ti~aYGqTg-SGKT~Tm 104 (349)
T d2zfia1 78 MLQHAFEGYNVCIFAYGQTG-AGKSYTM 104 (349)
T ss_dssp HHHHHHTTCCEEEEEECSTT-SSHHHHH
T ss_pred HHHHHHhccCceeeeeccCC-CCCceee
Confidence 3456688876 45556999 9999874
No 141
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=49.13 E-value=9.8 Score=31.66 Aligned_cols=15 Identities=20% Similarity=0.162 Sum_probs=12.9
Q ss_pred CcEEEEcCCCcchhHH
Q 011963 218 KDILETSGSSSTIVQI 233 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTl 233 (474)
.=+++.+++| +|||.
T Consensus 27 ~~~~I~G~~G-~GKT~ 41 (242)
T d1tf7a1 27 RSTLVSGTSG-TGKTL 41 (242)
T ss_dssp SEEEEEESTT-SSHHH
T ss_pred eEEEEEeCCC-CCHHH
Confidence 5678899999 99994
No 142
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=48.69 E-value=3.2 Score=32.67 Aligned_cols=13 Identities=15% Similarity=0.038 Sum_probs=11.3
Q ss_pred EEEEcCCCcchhHH
Q 011963 220 ILETSGSSSTIVQI 233 (474)
Q Consensus 220 vl~~A~TG~SGKTl 233 (474)
++++.|+| ||||.
T Consensus 5 Iii~G~pG-sGKTT 17 (152)
T d1ly1a_ 5 ILTIGCPG-SGKST 17 (152)
T ss_dssp EEEECCTT-SSHHH
T ss_pred EEEECCCC-CCHHH
Confidence 67789999 99986
No 143
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=48.47 E-value=5.6 Score=36.65 Aligned_cols=25 Identities=8% Similarity=-0.045 Sum_probs=18.7
Q ss_pred HHHHHhcCCc--EEEEcCCCcchhHHHH
Q 011963 210 FWKCYSSAKD--ILETSGSSSTIVQIAW 235 (474)
Q Consensus 210 ~i~~~l~g~d--vl~~A~TG~SGKTlaf 235 (474)
.+..++.|.+ +++..+|| ||||...
T Consensus 72 lv~~~l~G~n~~i~aYGqtg-SGKTyTm 98 (345)
T d1x88a1 72 ILDEVIMGYNCTIFAYGQTG-TGKTFTM 98 (345)
T ss_dssp HHHHHHTTCEEEEEEEECTT-SSHHHHH
T ss_pred hHHHHhccCCceEEeeeecc-ccceEEe
Confidence 4566788986 44556999 9999764
No 144
>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=47.63 E-value=7.4 Score=29.79 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=51.0
Q ss_pred eEEeccccccCChhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCceEEEccC--CcccccCCcEEEEEEcCCc
Q 011963 333 LLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQ--SVASQSACIIQSVNVCASD 410 (474)
Q Consensus 333 ~lViDEad~ll~~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~~~v~v~~--~~~~~~~~i~q~~~~~~~~ 410 (474)
.++||-||.-.....+..-++.+...+-+++|+++-..+...++..+.......+.+.. ........+..........
T Consensus 13 ~iilD~AHN~~~~~~l~~~l~~~~~~~~~~v~g~~~dKd~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (129)
T d2gc6a1 13 LIVIDGAHNPDGINGLITALKQLFSQPITVIAGILADKDYAAMADRLTAAFSTVYLVPVPGTPRALPEAGYEALHEGRLK 92 (129)
T ss_dssp TEEECCCCSHHHHHHHHHHHHHHCSSCCEEEECCC----CCSSSSTTTTTCSEEEECCCTTSCCCC-----------CBC
T ss_pred cEEEECCCCHHHHHHHhhccccccchhhhhhccccCCccHHHHHHhhhhhCCeEEEECCCCCcccChHHHHHHHHhcccc
Confidence 48999999864433333333444556678889888777766655555444332233322 1111222221111112111
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHH
Q 011963 411 EEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTL 453 (474)
Q Consensus 411 ~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L 453 (474)
..-. +.+...+.... . ..|++|-|---+-++.+.|
T Consensus 93 ~~~~----~ai~~a~~~~~---~-~~vli~GS~ylvg~v~~~L 127 (129)
T d2gc6a1 93 DSWQ----EALAASLNDVP---D-QPIVITGSLYLASAVRQTL 127 (129)
T ss_dssp SCHH----HHHHHHHHHCT---T-SCEEEESCHHHHHHHHHHH
T ss_pred ccHH----HHHHHHHHhCC---C-CcEEEEehHHHHHHHHHHh
Confidence 2222 34444444433 3 3566667776666666655
No 145
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=47.56 E-value=4.9 Score=31.84 Aligned_cols=27 Identities=15% Similarity=0.130 Sum_probs=25.1
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
..++||||.+-.++...+..|...||+
T Consensus 82 ~~~ivvyC~~G~rs~~aa~~L~~~G~~ 108 (137)
T d1qxna_ 82 EKPVVVFCKTAARAALAGKTLREYGFK 108 (137)
T ss_dssp TSCEEEECCSSSCHHHHHHHHHHHTCS
T ss_pred ccceeeeecccchHHHHHHHHHHcCCC
Confidence 678999999999999999999999995
No 146
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=47.04 E-value=52 Score=24.54 Aligned_cols=82 Identities=12% Similarity=0.179 Sum_probs=46.5
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEE
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLV 335 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lV 335 (474)
.|+.|||=-...+...+...++.. |+.+.++..| ...++++.... ..+++
T Consensus 1 sPkILiVDD~~~~~~~l~~~L~~~---g~~v~~a~~~----------------------~eal~~~~~~~-----~dlvl 50 (121)
T d1ys7a2 1 SPRVLVVDDDSDVLASLERGLRLS---GFEVATAVDG----------------------AEALRSATENR-----PDAIV 50 (121)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHT---TCEEEEESSH----------------------HHHHHHHHHSC-----CSEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHC---CCEEEEECCH----------------------HHHHHHHHhCC-----CCEEE
Confidence 367777777777777766666554 5565544433 22333333322 23455
Q ss_pred eccccccCC---hhHHHHHHhhCCCCCcEEEEEccCCc
Q 011963 336 VDRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLTY 370 (474)
Q Consensus 336 iDEad~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~ 370 (474)
+|- .|-+ .+.+..|.+ .....+++++||.-..
T Consensus 51 ~D~--~mP~~~G~el~~~ir~-~~~~~piI~lt~~~~~ 85 (121)
T d1ys7a2 51 LDI--NMPVLDGVSVVTALRA-MDNDVPVCVLSARSSV 85 (121)
T ss_dssp EES--SCSSSCHHHHHHHHHH-TTCCCCEEEEECCCTT
T ss_pred EEe--eccCcccHHHHHHHHh-cCCCCEEEEEEeeCCH
Confidence 663 2333 455555544 4567899999987443
No 147
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}
Probab=46.68 E-value=22 Score=30.77 Aligned_cols=85 Identities=18% Similarity=0.121 Sum_probs=51.4
Q ss_pred HhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEecc-HHHHHHHHHHHHhcccCCcEEEEEecC
Q 011963 214 YSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSS-QEKAAKVRSVCKPLKAFGIHTVSLHPG 292 (474)
Q Consensus 214 ~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~Pt-reLa~Qi~~~~~~l~~~~i~v~~~~gg 292 (474)
+|.||-+||+..++|-|+.+|- .+.. .|-.+++..-+ .+.+.++...+... .+.++..+..+
T Consensus 1 ~L~gK~alITGas~GIG~aiA~------~la~---------~Ga~V~~~~r~~~~~~~~~~~~~~~~--~g~~~~~~~~D 63 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIAT------ALAA---------QGADIVLNGFGDAAEIEKVRAGLAAQ--HGVKVLYDGAD 63 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHH------HHHH---------TTCEEEEECCSCHHHHHHHHHHHHHH--HTSCEEEECCC
T ss_pred CCCcCEEEEeCCCCHHHHHHHH------HHHH---------CCCEEEEEeCCcHHHHHHHHHHHHHh--cCCcEEEEECC
Confidence 4788988887666556665433 3333 36666665543 45666666655443 25567677777
Q ss_pred CCHHHHHHHHh------cCCCcEEEEChH
Q 011963 293 AAIDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 293 ~~~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
.....+...+- -+++||||...|
T Consensus 64 v~~~~~v~~~~~~~~~~~G~iDiLVnnAG 92 (260)
T d1x1ta1 64 LSKGEAVRGLVDNAVRQMGRIDILVNNAG 92 (260)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEeecc
Confidence 66555544432 147999998765
No 148
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=46.04 E-value=3.2 Score=33.36 Aligned_cols=16 Identities=25% Similarity=0.241 Sum_probs=13.7
Q ss_pred CCcEEEEcCCCcchhHH
Q 011963 217 AKDILETSGSSSTIVQI 233 (474)
Q Consensus 217 g~dvl~~A~TG~SGKTl 233 (474)
-|.|++..|+| ||||.
T Consensus 7 ~K~I~i~G~~G-sGKTT 22 (192)
T d1lw7a2 7 AKTVAILGGES-SGKSV 22 (192)
T ss_dssp CEEEEEECCTT-SHHHH
T ss_pred ceEEEEECCCC-CCHHH
Confidence 35789999999 99985
No 149
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=45.94 E-value=3.1 Score=33.43 Aligned_cols=19 Identities=5% Similarity=-0.081 Sum_probs=15.4
Q ss_pred hcCCcEEEEcCCCcchhHHH
Q 011963 215 SSAKDILETSGSSSTIVQIA 234 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTla 234 (474)
+.|+=+++..|+| ||||..
T Consensus 2 ~~g~iI~l~G~~G-sGKSTi 20 (176)
T d1zp6a1 2 LGGNILLLSGHPG-SGKSTI 20 (176)
T ss_dssp CTTEEEEEEECTT-SCHHHH
T ss_pred CCCeEEEEECCCC-CCHHHH
Confidence 3567788999999 999963
No 150
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=45.32 E-value=5.5 Score=36.73 Aligned_cols=26 Identities=0% Similarity=0.019 Sum_probs=19.2
Q ss_pred HHHHHhcCCcE--EEEcCCCcchhHHHHH
Q 011963 210 FWKCYSSAKDI--LETSGSSSTIVQIAWI 236 (474)
Q Consensus 210 ~i~~~l~g~dv--l~~A~TG~SGKTlaf~ 236 (474)
.++.++.|.+. ++-.+|| ||||....
T Consensus 74 ~v~~~l~G~n~~i~aYGqtg-SGKT~T~~ 101 (342)
T d1f9va_ 74 LVQSSLDGYNVCIFAYGQTG-SGKTFTML 101 (342)
T ss_dssp HHGGGGGTCCEEEEEECCTT-SSHHHHHH
T ss_pred hhcchhcccccceeeeeccC-Cccccccc
Confidence 45667889864 4556999 99998763
No 151
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=44.72 E-value=8.1 Score=32.21 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=49.2
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHH---HHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcc
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDH---QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~---q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~ 332 (474)
+.++||.+.+.+.+..+...+. +..++|+.+... ....+..+.++|||+|. . -..++++..+.
T Consensus 93 ~~k~lvf~~~~~~~~~l~~~l~--------~~~i~g~~~~~~R~~~l~~F~~~~~~vLv~~~-~-----~~~Gidl~~~~ 158 (200)
T d2fwra1 93 KDKIIIFTRHNELVYRISKVFL--------IPAITHRTSREEREEILEGFRTGRFRAIVSSQ-V-----LDEGIDVPDAN 158 (200)
T ss_dssp SSCBCCBCSCHHHHHHHHHHTT--------CCBCCSSSCSHHHHTHHHHHHHSSCSBCBCSS-C-----CCSSSCSCCBS
T ss_pred CCcEEEEeCcHHHHHHHHhhcC--------cceeeCCCCHHHHHHHHHHhhcCCeeeeeecc-h-----hhcccCCCCCC
Confidence 4578999999888777765432 223678877553 24455666789999885 2 24678999999
Q ss_pred eEEecccc
Q 011963 333 LLVVDRLD 340 (474)
Q Consensus 333 ~lViDEad 340 (474)
++|+-+.+
T Consensus 159 ~vi~~~~~ 166 (200)
T d2fwra1 159 VGVIMSGS 166 (200)
T ss_dssp EEEEECCS
T ss_pred EEEEeCCC
Confidence 98886654
No 152
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=44.41 E-value=12 Score=29.36 Aligned_cols=28 Identities=11% Similarity=0.050 Sum_probs=25.1
Q ss_pred CCCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 432 ~~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
...++|+||++-..+-..+..|...|++
T Consensus 87 ~~~~vV~yC~~G~~a~~~~~~l~~~G~~ 114 (136)
T d1e0ca2 87 PDKEIVTHCQTHHRSGLTYLIAKALGYP 114 (136)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHTTCS
T ss_pred CCCceEEeCCChHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999995
No 153
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=44.06 E-value=9.4 Score=33.13 Aligned_cols=33 Identities=9% Similarity=-0.161 Sum_probs=22.9
Q ss_pred HHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHH
Q 011963 211 WKCYSSAKDILETSGSSSTIVQIAWIVATAADSIA 245 (474)
Q Consensus 211 i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~ 245 (474)
|+-++.|.=+++.+++| +||| .|++-+...+..
T Consensus 23 i~G~~pg~~~~i~G~~G-~GKS-~l~l~la~~ia~ 55 (274)
T d1nlfa_ 23 LPNMVAGTVGALVSPGG-AGKS-MLALQLAAQIAG 55 (274)
T ss_dssp ETTEETTSEEEEEESTT-SSHH-HHHHHHHHHHHT
T ss_pred hCCccCCcEEEEEeCCC-CCHH-HHHHHHHHHHHc
Confidence 45556677788899999 9999 455555545543
No 154
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=44.01 E-value=5.6 Score=33.96 Aligned_cols=17 Identities=6% Similarity=-0.144 Sum_probs=14.4
Q ss_pred CcEEEEcCCCcchhHHHH
Q 011963 218 KDILETSGSSSTIVQIAW 235 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTlaf 235 (474)
.++|+..|+| +|||.+.
T Consensus 36 ~~~L~~GPpG-tGKT~lA 52 (238)
T d1in4a2 36 DHVLLAGPPG-LGKTTLA 52 (238)
T ss_dssp CCEEEESSTT-SSHHHHH
T ss_pred CeEEEECCCC-CcHHHHH
Confidence 3799999999 9999744
No 155
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=43.80 E-value=36 Score=29.12 Aligned_cols=83 Identities=14% Similarity=0.145 Sum_probs=53.8
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.+|=+||+..++|-|+.+|-. +.. .|-.++++.-+.+-+.++...+... +.++..+..+..
T Consensus 8 lenKvalITGas~GIG~a~a~~------la~---------~Ga~V~~~~r~~~~l~~~~~~l~~~---g~~~~~~~~Dvt 69 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKM------LAK---------SVSHVICISRTQKSCDSVVDEIKSF---GYESSGYAGDVS 69 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHH------HTT---------TSSEEEEEESSHHHHHHHHHHHHTT---TCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHH------HHH---------cCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCC
Confidence 4677788877666566654432 222 4678888887777777777766554 556667777766
Q ss_pred HHHHHHHHh------cCCCcEEEEChH
Q 011963 295 IDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
...+...+- -+++||||...+
T Consensus 70 ~~~~v~~~~~~~~~~~g~iDilvnnag 96 (251)
T d2c07a1 70 KKEEISEVINKILTEHKNVDILVNNAG 96 (251)
T ss_dssp CHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCceeeeeccc
Confidence 555544331 247999998765
No 156
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=43.14 E-value=6 Score=33.86 Aligned_cols=17 Identities=6% Similarity=-0.191 Sum_probs=14.4
Q ss_pred CcEEEEcCCCcchhHHHH
Q 011963 218 KDILETSGSSSTIVQIAW 235 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTlaf 235 (474)
.++|...|+| +|||...
T Consensus 36 ~~~Ll~GPpG-~GKTtla 52 (239)
T d1ixsb2 36 EHLLLFGPPG-LGKTTLA 52 (239)
T ss_dssp CCEEEECCTT-SCHHHHH
T ss_pred CeEEEECCCC-CCHHHHH
Confidence 4799999999 9999644
No 157
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=42.40 E-value=5.2 Score=32.79 Aligned_cols=48 Identities=8% Similarity=0.092 Sum_probs=36.1
Q ss_pred CCcceEEeccccccCC-----hhHHHHHHhhCCCCCcEEEEEccCCccHHHHH
Q 011963 329 SGVSLLVVDRLDSLSK-----GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAV 376 (474)
Q Consensus 329 ~~l~~lViDEad~ll~-----~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~ 376 (474)
...++||+||+-..+. .+++..+++.-|....+|+.--..|+++.+.+
T Consensus 93 ~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p~~L~e~A 145 (157)
T d1g5ta_ 93 PLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILDLA 145 (157)
T ss_dssp TTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHHHHHHC
T ss_pred CccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCCHHHHHhc
Confidence 4467999999987665 88888888888887777776666776555543
No 158
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.40 E-value=5.1 Score=33.85 Aligned_cols=24 Identities=4% Similarity=-0.339 Sum_probs=19.2
Q ss_pred HHHHHHhcC-----CcEEEEcCCCcchhHH
Q 011963 209 EFWKCYSSA-----KDILETSGSSSTIVQI 233 (474)
Q Consensus 209 ~~i~~~l~g-----~dvl~~A~TG~SGKTl 233 (474)
..+..++.| +-+++..|+| ||||.
T Consensus 21 ~~LD~ll~GGi~~G~~~li~G~pG-sGKT~ 49 (251)
T d1szpa2 21 KNLDTLLGGGVETGSITELFGEFR-TGKSQ 49 (251)
T ss_dssp HHHHHHHTSSEESSSEEEEEESTT-SSHHH
T ss_pred HHHHhhhCCCCcCCeEEEEEcCCC-CCHHH
Confidence 667777766 4688889999 99994
No 159
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=41.01 E-value=18 Score=30.84 Aligned_cols=52 Identities=10% Similarity=0.039 Sum_probs=39.8
Q ss_pred HHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhC--CCccc--------chHHHHHHHhhc
Q 011963 417 GIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK--GYSIS--------TGSNCIVSHIKN 473 (474)
Q Consensus 417 l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~--gi~v~--------~~r~~~i~~Fk~ 473 (474)
++..|..-+.. ++++.+.|+..+..+.++..|.+. ++++. .+.+.+|++|++
T Consensus 20 i~~~I~~El~r-----GgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~eke~im~~F~~ 81 (211)
T d2eyqa5 20 VREAILREILR-----GGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHH 81 (211)
T ss_dssp HHHHHHHHHTT-----TCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHc-----CCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHHHHHHHHHHHHc
Confidence 44555555544 679999999999999999999773 44443 788899999985
No 160
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=40.91 E-value=15 Score=29.13 Aligned_cols=21 Identities=5% Similarity=-0.113 Sum_probs=13.2
Q ss_pred EEcCCCcchhHHHHHHHHHHHHH
Q 011963 222 ETSGSSSTIVQIAWIVATAADSI 244 (474)
Q Consensus 222 ~~A~TG~SGKTlaf~lp~l~~l~ 244 (474)
++.+.| |||| +++--++..|.
T Consensus 6 I~G~~g-SGKT-Tli~~l~~~L~ 26 (165)
T d1xjca_ 6 VVGYKH-SGKT-TLMEKWVAAAV 26 (165)
T ss_dssp EECCTT-SSHH-HHHHHHHHHHH
T ss_pred EEeCCC-CCHH-HHHHHHHHHHH
Confidence 677889 9999 44333443333
No 161
>d1pjra2 c.37.1.19 (A:319-651) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=40.26 E-value=20 Score=31.58 Aligned_cols=56 Identities=4% Similarity=-0.098 Sum_probs=42.6
Q ss_pred EEcCCchhHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc
Q 011963 405 NVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461 (474)
Q Consensus 405 ~~~~~~~~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~ 461 (474)
+.+.+..+-...+.+.|.+++.++. .+.+-+.|-|.|...+..++..|...||++.
T Consensus 6 ~~~~~~~~Ea~~Ia~~I~~li~~g~-~~~~DIAILvRt~~~~~~i~~~L~~~gIP~~ 61 (333)
T d1pjra2 6 YEAMNEADEAQFVAGRIREAVERGE-RRYRDFAVLYRTNAQSRVMEEMLLKANIPYQ 61 (333)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTTTS-CCGGGEEEEESSGGGHHHHHHHHHHTTCCEE
T ss_pred EeCCCHHHHHHHHHHHHHHHHHcCC-CCcCCEEEEEECcHhHHHHHHHHHHCCCCEE
Confidence 3333334445667788888887763 1246799999999999999999999999997
No 162
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=39.61 E-value=8.2 Score=33.21 Aligned_cols=15 Identities=7% Similarity=-0.146 Sum_probs=13.1
Q ss_pred cEEEEcCCCcchhHHH
Q 011963 219 DILETSGSSSTIVQIA 234 (474)
Q Consensus 219 dvl~~A~TG~SGKTla 234 (474)
.+|+..|+| +|||..
T Consensus 34 ~ilL~GpPG-tGKT~l 48 (273)
T d1gvnb_ 34 AFLLGGQPG-SGKTSL 48 (273)
T ss_dssp EEEEECCTT-SCTHHH
T ss_pred EEEEECCCC-CCHHHH
Confidence 489999999 999964
No 163
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}
Probab=39.38 E-value=72 Score=27.15 Aligned_cols=83 Identities=13% Similarity=0.056 Sum_probs=51.9
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
|.||-+||+..++|-|+.+|- .+.. .|-.+++..-..+-+.++...+... +.++..+..+..
T Consensus 6 L~GK~alITGas~GIG~aia~------~la~---------~Ga~V~~~~r~~~~l~~~~~~~~~~---g~~~~~~~~Dv~ 67 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVE------ELAS---------LGASVYTCSRNQKELNDCLTQWRSK---GFKVEASVCDLS 67 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHH------HHHH---------TTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHH------HHHH---------CCCEEEEEECCHHHHHHHHHHHHhc---CCCceEEEeeCC
Confidence 578888988777657775443 2333 3667777777777666666655543 566666667765
Q ss_pred HHHHHHHH-----hc-C-CCcEEEEChH
Q 011963 295 IDHQITGL-----RS-C-EPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l-----~~-~-~~~IlV~TP~ 315 (474)
...+...+ .. + ++||||...|
T Consensus 68 ~~~~v~~~~~~~~~~~~~~idilvnnAG 95 (259)
T d2ae2a_ 68 SRSERQELMNTVANHFHGKLNILVNNAG 95 (259)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEECCc
Confidence 44433322 11 2 5899998876
No 164
>d1vl1a_ c.124.1.1 (A:) 6-phosphogluconolactonase {Thermotoga maritima [TaxId: 2336]}
Probab=39.36 E-value=15 Score=31.17 Aligned_cols=171 Identities=12% Similarity=0.091 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHhc-ccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC
Q 011963 266 QEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK 344 (474)
Q Consensus 266 reLa~Qi~~~~~~l-~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~ 344 (474)
..+|..|...+..+ ...+.-...+.||. ||..+.+.|....++++++.++.+||-..-.+
T Consensus 13 ~~~a~~i~~~~~~~~~~~~~~~i~lsGG~-------------------tp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~ 73 (218)
T d1vl1a_ 13 DFVVEKIRTKMEKLLEEKDKIFVVLAGGR-------------------TPLPVYEKLAEQKFPWNRIHFFLSDERYVPLD 73 (218)
T ss_dssp HHHHHHHHHHHHHHHHHCSCEEEEECCST-------------------THHHHHHHHTTSCCCGGGEEEEESEEESSCTT
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEECCCh-------------------hHHHHHHHHHhcCCCcceEEEEecceecccCC
Confidence 34666666666665 44444455677774 45556666666778999999999999432222
Q ss_pred --hhHHHHHHhhC----C-CCCcEEEEEccCCcc--HHHHHHHh---hcCC-ceEEEccCCcccc------cCCcEEEEE
Q 011963 345 --GDTLSLIRQSI----S-GKPHTVVFNDCLTYT--SVPAVQNL---LLGS-INRLSLNQSVASQ------SACIIQSVN 405 (474)
Q Consensus 345 --~~~l~~Il~~l----~-~~~q~llfSAT~~~~--v~~l~~~~---l~~p-~~~v~v~~~~~~~------~~~i~q~~~ 405 (474)
......+.+.+ + +..++..+....+.+ .......+ .... ...+.++...+.. ...-...+.
T Consensus 74 ~~~Sn~~~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~y~~~i~~~~~~~Dl~lLG~G~DGHiASlFp~~~~~~~~~~~ 153 (218)
T d1vl1a_ 74 SDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSATDQFDLAILGMGPDGHVASIFDLETGNKDNLVT 153 (218)
T ss_dssp STTCHHHHHHHHTTTTSCCCGGGEECCCTTSCHHHHHHHHHHHHHHHCSSCSEEEECCCTTSCBTTBCSHHHHTCSSSEE
T ss_pred cccchHHHHHHHhhhhcccchheeeeccccccHHHHHHHhhhhhhccccceeEEEecCCCCCcccccCCCccccccceEE
Confidence 33333333333 2 223455544443321 12222222 1111 2233333321111 000011122
Q ss_pred EcCCch-hHHHHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCccc
Q 011963 406 VCASDE-EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461 (474)
Q Consensus 406 ~~~~~~-~K~~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~v~ 461 (474)
.+.... .+...+---+..+ .. ...+++++.-...++.+...+....+|+.
T Consensus 154 ~~~~~~~~~~~RITltl~~i-~~-----ak~i~ll~~G~~K~~~l~~~~~~~~~Pa~ 204 (218)
T d1vl1a_ 154 FTDPSGDPKVPRVTLTFRAL-NT-----SLYVLFLIRGKEKINRLTEILKDTPLPAY 204 (218)
T ss_dssp ECSSBTTTTBCEEEECHHHH-TT-----CSEEEEEEESHHHHHHHHHHHTTCCCGGG
T ss_pred eeccccCCCCCeeecCHHHh-hc-----cCEEEEEEcCHHHHHHHHHHhcCCCCChH
Confidence 222111 1100000112222 11 45777888888899999999987778876
No 165
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=39.24 E-value=17 Score=28.75 Aligned_cols=29 Identities=7% Similarity=-0.072 Sum_probs=25.0
Q ss_pred CCCCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 431 ~~~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
....++|+||++--.|-.++-.|...|++
T Consensus 89 ~~~~~iI~yC~sG~~A~~~~~~l~~lG~~ 117 (144)
T d1rhsa2 89 DLTKPLIATCRKGVTACHIALAAYLCGKP 117 (144)
T ss_dssp CTTSCEEEECSSSSTHHHHHHHHHHTTCC
T ss_pred CCCCCEEEEecccchHHHHHHHHHHcCCC
Confidence 34679999999988888899999999995
No 166
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=39.06 E-value=6.4 Score=31.03 Aligned_cols=14 Identities=7% Similarity=-0.088 Sum_probs=11.9
Q ss_pred EEEEcCCCcchhHHH
Q 011963 220 ILETSGSSSTIVQIA 234 (474)
Q Consensus 220 vl~~A~TG~SGKTla 234 (474)
++++.|+| ||||..
T Consensus 5 I~i~G~~G-sGKTTv 18 (176)
T d2bdta1 5 YIITGPAG-VGKSTT 18 (176)
T ss_dssp EEEECSTT-SSHHHH
T ss_pred EEEECCCC-CCHHHH
Confidence 67889999 999964
No 167
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=38.95 E-value=12 Score=29.26 Aligned_cols=27 Identities=11% Similarity=0.026 Sum_probs=24.8
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
..++++||.+-.++...+..|...||.
T Consensus 80 ~~~iV~~C~~g~rs~~aa~~L~~~G~~ 106 (136)
T d1yt8a1 80 RTRVIVNCAGRTRSIIGTQSLLNAGIP 106 (136)
T ss_dssp TSEEEEECSSSHHHHHHHHHHHHTTCS
T ss_pred cceEEEEcCCCCchHHHHHHHHHcCCC
Confidence 568999999999999999999999993
No 168
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=38.57 E-value=6.8 Score=31.16 Aligned_cols=17 Identities=24% Similarity=0.048 Sum_probs=14.2
Q ss_pred CCcEEEEcCCCcchhHHH
Q 011963 217 AKDILETSGSSSTIVQIA 234 (474)
Q Consensus 217 g~dvl~~A~TG~SGKTla 234 (474)
+..++++.|.| ||||..
T Consensus 5 ~~~I~i~G~~G-sGKTT~ 21 (174)
T d1y63a_ 5 GINILITGTPG-TGKTSM 21 (174)
T ss_dssp SCEEEEECSTT-SSHHHH
T ss_pred CCEEEEEeCCC-CCHHHH
Confidence 45789999999 999963
No 169
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.37 E-value=28 Score=30.16 Aligned_cols=91 Identities=16% Similarity=0.125 Sum_probs=54.6
Q ss_pred hHHHHHHHhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEE
Q 011963 207 GIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT 286 (474)
Q Consensus 207 Q~~~i~~~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v 286 (474)
+...-|-+|.|+-+||+..++|-|+.+|..+ .. .|..++++.=+.+-..++...+.... +..+
T Consensus 4 ~~~f~~~~L~GK~alITGassGIG~aiA~~l------a~---------~G~~Vil~~r~~~~l~~~~~~~~~~~--~~~~ 66 (269)
T d1xu9a_ 4 NEEFRPEMLQGKKVIVTGASKGIGREMAYHL------AK---------MGAHVVVTARSKETLQKVVSHCLELG--AASA 66 (269)
T ss_dssp SSCCCGGGGTTCEEEESSCSSHHHHHHHHHH------HH---------TTCEEEEEESCHHHHHHHHHHHHHHT--CSEE
T ss_pred CccCCccccCCCEEEEeCCCcHHHHHHHHHH------HH---------CCCEEEEEECCHHHHHHHHHHHhhhh--cccc
Confidence 4455577899999999887776777665533 22 37788888877777777766655542 3344
Q ss_pred EEEecCCCHHHHHHHH------hcCCCcEEEECh
Q 011963 287 VSLHPGAAIDHQITGL------RSCEPEFLVSTP 314 (474)
Q Consensus 287 ~~~~gg~~~~~q~~~l------~~~~~~IlV~TP 314 (474)
..+............+ ..+..+++|..-
T Consensus 67 ~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~na 100 (269)
T d1xu9a_ 67 HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH 100 (269)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECC
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhCCcccccccc
Confidence 4444443322221111 123678888654
No 170
>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=38.22 E-value=1.1e+02 Score=27.46 Aligned_cols=103 Identities=8% Similarity=0.013 Sum_probs=59.2
Q ss_pred CCccccCCCchhhHHHHHHHhcCCcEEEEc----CCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCc-EEEEEeccHHHH
Q 011963 195 VEQDNPLFVNSWGIEFWKCYSSAKDILETS----GSSSTIVQIAWIVATAADSIARKEKEGFSFTGP-FLLFLVSSQEKA 269 (474)
Q Consensus 195 ~~~ptpi~~~~~Q~~~i~~~l~g~dvl~~A----~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~-~alil~PtreLa 269 (474)
.-+|||+ +-..-+...+.|.++.+-. ||| |-|.-....-++. ... .+. +.++-+-+---+
T Consensus 47 ~~rpTPL----i~~~~Ls~~lgg~~Iy~K~E~lnptG-S~KdR~a~~~i~~-a~~---------~G~~~~v~~~s~Gn~g 111 (386)
T d1v8za1 47 AGRPTPL----YYAKRLTEKIGGAKIYLKREDLVHGG-AHKTNNAIGQALL-AKF---------MGKTRLIAETGAGQHG 111 (386)
T ss_dssp TCCSCCE----EECHHHHHHHTSSEEEEEEGGGSTTS-BTHHHHHHHHHHH-HHH---------TTCCEEEEEESSSHHH
T ss_pred CCCCCcc----eEhHhhHHhcCCCeEEEEeccCCCCC-CccchHHHHHHHH-Hhh---------cCCceeEeecccchHH
Confidence 4479998 1345555666788888875 999 9998776544432 222 122 334333444444
Q ss_pred HHHHHHHHhcccCCcEEEEEecCCCHH---HHHHHHhcCCCcEEEEChH
Q 011963 270 AKVRSVCKPLKAFGIHTVSLHPGAAID---HQITGLRSCEPEFLVSTPE 315 (474)
Q Consensus 270 ~Qi~~~~~~l~~~~i~v~~~~gg~~~~---~q~~~l~~~~~~IlV~TP~ 315 (474)
..+.-.+..+ |+++..+++..+.. .....+...|.+|+..+++
T Consensus 112 ~a~A~aaa~~---G~~~~i~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~ 157 (386)
T d1v8za1 112 VATAMAGALL---GMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSG 157 (386)
T ss_dssp HHHHHHHHHT---TCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECST
T ss_pred HHHHHHHHHc---CCcccccccchhhhhhHHHHHHHHhcCCeEEEecCC
Confidence 4444444443 78887777643322 2233344347888877654
No 171
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}
Probab=38.00 E-value=73 Score=27.14 Aligned_cols=85 Identities=13% Similarity=0.018 Sum_probs=52.4
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||+..++|-|+.+|-. +.. .|-.+++..-+.+...+....+.... .+.++..+..+..
T Consensus 2 l~gK~alITGas~GIG~aia~~------la~---------~Ga~V~i~~r~~~~l~~~~~~~~~~~-~~~~~~~~~~Dvt 65 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVR------LAA---------EGAKLSLVDVSSEGLEASKAAVLETA-PDAEVLTTVADVS 65 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHH------HHH---------TTCEEEEEESCHHHHHHHHHHHHHHC-TTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHH------HHH---------CCCEEEEEECCHHHHHHHHHHHHhhC-CCCeEEEEeccCC
Confidence 4688888877666577754432 333 36677777767777666666665542 2456666666765
Q ss_pred HHHHHHHHh------cCCCcEEEEChH
Q 011963 295 IDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
-..+...+- -+++||||..-|
T Consensus 66 ~~~~v~~~~~~~~~~~G~iDiLVnnAG 92 (258)
T d1iy8a_ 66 DEAQVEAYVTATTERFGRIDGFFNNAG 92 (258)
T ss_dssp SHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 444443331 247999997654
No 172
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.27 E-value=96 Score=26.24 Aligned_cols=85 Identities=11% Similarity=0.108 Sum_probs=51.2
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||+..++|-|+-+|- .+.. .|..+++..-..+-+.++.+.+.... .+-++..+..+..
T Consensus 8 lk~Kv~lITGas~GIG~aiA~------~la~---------~G~~Vv~~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~Dls 71 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVAR------ALVQ---------QGLKVVGCARTVGNIEELAAECKSAG-YPGTLIPYRCDLS 71 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHH------HHHH---------TTCEEEEEESCHHHHHHHHHHHHHTT-CSSEEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHH------HHHH---------CCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEEEEccCC
Confidence 568888888766656664433 3333 36677776666555566666655542 2346666666666
Q ss_pred HHHHHHHH----h--cCCCcEEEEChH
Q 011963 295 IDHQITGL----R--SCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l----~--~~~~~IlV~TP~ 315 (474)
..+....+ . -+++|+||-..|
T Consensus 72 ~~~~v~~~v~~~~~~~g~iD~lVnnAg 98 (257)
T d1xg5a_ 72 NEEDILSMFSAIRSQHSGVDICINNAG 98 (257)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEeccc
Confidence 54444332 1 247999998765
No 173
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.19 E-value=9.3 Score=32.31 Aligned_cols=32 Identities=3% Similarity=-0.275 Sum_probs=23.2
Q ss_pred CCccccCCCchhhHHHHHHHhcC-----CcEEEEcCCCcchhHHH
Q 011963 195 VEQDNPLFVNSWGIEFWKCYSSA-----KDILETSGSSSTIVQIA 234 (474)
Q Consensus 195 ~~~ptpi~~~~~Q~~~i~~~l~g-----~dvl~~A~TG~SGKTla 234 (474)
++-||-| ..+..++.| +-+++..|+| +|||.-
T Consensus 17 ~ri~TGi-------~~LD~~lgGGip~G~~~~i~G~~G-sGKT~l 53 (258)
T d1v5wa_ 17 FHITTGS-------QEFDKLLGGGIESMAITEAFGEFR-TGKTQL 53 (258)
T ss_dssp CCBCCSC-------HHHHHHTTSSBCSSEEEEEECCTT-CTHHHH
T ss_pred ceecCCC-------HHHHHhhcCCCcCCEEEEEECCCC-CCHHHH
Confidence 4556655 667777765 4678889999 999953
No 174
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.18 E-value=6.5 Score=32.45 Aligned_cols=15 Identities=20% Similarity=0.089 Sum_probs=13.1
Q ss_pred CcEEEEcCCCcchhHH
Q 011963 218 KDILETSGSSSTIVQI 233 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTl 233 (474)
|-|+++.|+| +|||-
T Consensus 2 rpIvl~GpsG-~GK~t 16 (186)
T d1gkya_ 2 RPIVISGPSG-TGKST 16 (186)
T ss_dssp CCEEEECCTT-SSHHH
T ss_pred CeEEEECCCC-CCHHH
Confidence 4589999999 99985
No 175
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=36.75 E-value=6.3 Score=31.22 Aligned_cols=14 Identities=21% Similarity=0.079 Sum_probs=12.4
Q ss_pred cEEEEcCCCcchhHH
Q 011963 219 DILETSGSSSTIVQI 233 (474)
Q Consensus 219 dvl~~A~TG~SGKTl 233 (474)
.++++.|.| ||||.
T Consensus 6 ~I~i~G~pG-sGKTT 19 (173)
T d1rkba_ 6 NILLTGTPG-VGKTT 19 (173)
T ss_dssp CEEEECSTT-SSHHH
T ss_pred EEEEECCCC-CCHHH
Confidence 588999999 99995
No 176
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=36.50 E-value=83 Score=23.90 Aligned_cols=36 Identities=6% Similarity=-0.019 Sum_probs=22.8
Q ss_pred ceEEeccccccCC---hhHHHHHHhhCCCCCcEEEEEccCCc
Q 011963 332 SLLVVDRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLTY 370 (474)
Q Consensus 332 ~~lViDEad~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~ 370 (474)
.++++| -.|-+ .+.+..|... .++.++|++||.-..
T Consensus 46 dlil~D--~~mP~~~G~el~~~lr~~-~~~~pvI~lT~~~~~ 84 (140)
T d1qkka_ 46 GIVISD--IRMPGMDGLALFRKILAL-DPDLPMILVTGHGDI 84 (140)
T ss_dssp SEEEEE--SCCSSSCHHHHHHHHHHH-CTTSCEEEEECGGGH
T ss_pred chHHHh--hccCCCCHHHHHHHHHHh-CCCCcEEEEECCCCH
Confidence 456676 23544 4555555554 557899999997544
No 177
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=36.10 E-value=53 Score=28.01 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=56.8
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
|.||-+||+..++|-|+.+|.. +.. .|-.+++..-..+.+.++... + +-++..+..+..
T Consensus 3 L~gK~alVTGas~GIG~aia~~------la~---------~Ga~V~~~~r~~~~l~~~~~~---~---~~~~~~~~~Dvt 61 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEA------YVR---------EGARVAIADINLEAARATAAE---I---GPAACAIALDVT 61 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHH------HHH---------TTEEEEEEESCHHHHHHHHHH---H---CTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHH------HHH---------CCCEEEEEECCHHHHHHHHHH---h---CCceEEEEeeCC
Confidence 5788888887776677755443 223 366766666665555444433 3 344555666665
Q ss_pred HHHHHHHHh------cCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC
Q 011963 295 IDHQITGLR------SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK 344 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~ 344 (474)
...+...+- -+++||||...|-. ....+.-+=.|+.+.+++
T Consensus 62 ~~~~v~~~~~~~~~~~g~iDilVnnAg~~---------~~~~~~~~~~~~~~~~~~ 108 (256)
T d1k2wa_ 62 DQASIDRCVAELLDRWGSIDILVNNAALF---------DLAPIVEITRESYDRLFA 108 (256)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC---------CCCCGGGCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCccEEEeecccc---------cccccccCCHHHHHhhhc
Confidence 544444331 24799999887631 122222233466666666
No 178
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=36.02 E-value=6.9 Score=35.51 Aligned_cols=18 Identities=17% Similarity=0.014 Sum_probs=15.5
Q ss_pred cCCcEEEEcCCCcchhHHH
Q 011963 216 SAKDILETSGSSSTIVQIA 234 (474)
Q Consensus 216 ~g~dvl~~A~TG~SGKTla 234 (474)
.+.++|+..|.| +|||..
T Consensus 27 ~~h~vLl~G~pG-~GKT~l 44 (333)
T d1g8pa_ 27 GIGGVLVFGDRG-TGKSTA 44 (333)
T ss_dssp GGCCEEEECCGG-GCTTHH
T ss_pred CCCeEEEECCCC-ccHHHH
Confidence 457899999999 999964
No 179
>d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=35.99 E-value=56 Score=23.25 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=33.8
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCC
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEP 307 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~ 307 (474)
+|.++|+.-..++........+.|.. ++++...+++.+...|.......++
T Consensus 3 ~pdv~iv~~~~~~~~~a~~i~~~LR~-~~~~~~~~~~~~l~kq~k~A~~~~~ 53 (96)
T d1h4vb1 3 GPDLYLIPLTEEAVAEAFYLAEALRP-RLRAEYALAPRKPAKGLEEALKRGA 53 (96)
T ss_dssp CCSEEEEESSHHHHHHHHHHHHHHTT-TSCEEECSSCCCHHHHHHHHHHTTC
T ss_pred CCEEEEEEcCHHHHHHHHHHHHHHHc-CceEEEECCCCCHHHHHHHHHHcCC
Confidence 56655555555566666666666743 7888888888888888776654343
No 180
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.17 E-value=8.7 Score=32.86 Aligned_cols=41 Identities=10% Similarity=0.140 Sum_probs=25.5
Q ss_pred CcceEEeccccccCC--hhHHHHHHhhCC-CCCcEEEEEccCCc
Q 011963 330 GVSLLVVDRLDSLSK--GDTLSLIRQSIS-GKPHTVVFNDCLTY 370 (474)
Q Consensus 330 ~l~~lViDEad~ll~--~~~l~~Il~~l~-~~~q~llfSAT~~~ 370 (474)
...++++||+|.+.. ...+..++.... ...++++.++|...
T Consensus 123 ~~~vi~ide~~~~~~~~~~~~~~~~~~~~~~~~~ii~i~~~~~~ 166 (253)
T d1sxja2 123 KHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNL 166 (253)
T ss_dssp TSEEEEECSGGGCCTTSTTHHHHHHHHHHHCSSCEEEEESCTTS
T ss_pred cceEEEeeeccccccchhhhhHHHhhhhcccccccccccccccc
Confidence 456899999999987 444555555432 33455655555443
No 181
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=35.03 E-value=8.4 Score=30.88 Aligned_cols=16 Identities=13% Similarity=-0.110 Sum_probs=13.7
Q ss_pred CcEEEEcCCCcchhHHH
Q 011963 218 KDILETSGSSSTIVQIA 234 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTla 234 (474)
++++++.+.| ||||..
T Consensus 1 k~I~liG~~G-sGKsTi 16 (161)
T d1viaa_ 1 KNIVFIGFMG-SGKSTL 16 (161)
T ss_dssp CCEEEECCTT-SCHHHH
T ss_pred CcEEEECCCC-CCHHHH
Confidence 5789999999 999954
No 182
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=34.34 E-value=11 Score=34.36 Aligned_cols=19 Identities=0% Similarity=-0.169 Sum_probs=14.7
Q ss_pred cCCc--EEEEcCCCcchhHHHH
Q 011963 216 SAKD--ILETSGSSSTIVQIAW 235 (474)
Q Consensus 216 ~g~d--vl~~A~TG~SGKTlaf 235 (474)
.|.+ +++-.+|| ||||.+.
T Consensus 82 ~G~n~~i~aYGqTG-SGKTyTm 102 (330)
T d1ry6a_ 82 NGCVCSCFAYGQTG-SGKTYTM 102 (330)
T ss_dssp HCCEEEEEEECCTT-SSHHHHH
T ss_pred cCCCeEEEeeeccc-cccceee
Confidence 5876 45556999 9999875
No 183
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=34.29 E-value=7.8 Score=32.82 Aligned_cols=17 Identities=6% Similarity=-0.126 Sum_probs=14.4
Q ss_pred cCCcEEEEcCCCcchhHH
Q 011963 216 SAKDILETSGSSSTIVQI 233 (474)
Q Consensus 216 ~g~dvl~~A~TG~SGKTl 233 (474)
+|+=+++++|+| +|||-
T Consensus 1 ~G~livi~GPSG-~GK~t 17 (205)
T d1s96a_ 1 QGTLYIVSAPSG-AGKSS 17 (205)
T ss_dssp CCCEEEEECCTT-SCHHH
T ss_pred CCeEEEEECCCC-CCHHH
Confidence 466789999999 99985
No 184
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=34.06 E-value=65 Score=27.51 Aligned_cols=85 Identities=14% Similarity=0.094 Sum_probs=51.7
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
|.||-+||+..++|-|+.+|-. +.. .|-.++++.-+.+-+.++...+... +.++..+..+..
T Consensus 6 LkgK~alVTGas~GIG~aiA~~------la~---------~Ga~V~~~~r~~~~l~~~~~~~~~~---~~~~~~~~~Dv~ 67 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEE------FAG---------FGAVIHTCARNEYELNECLSKWQKK---GFQVTGSVCDAS 67 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHH------HHH---------TTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHH------HHH---------CCCEEEEEECCHHHHHHHHHHHHhc---CCceEEEeccCC
Confidence 4688889887666566654432 333 3667777777777666666665543 445666666665
Q ss_pred HHHHHHHH----h---cCCCcEEEEChHHH
Q 011963 295 IDHQITGL----R---SCEPEFLVSTPERL 317 (474)
Q Consensus 295 ~~~q~~~l----~---~~~~~IlV~TP~rL 317 (474)
...+...+ . .+.+||||...|-.
T Consensus 68 ~~~~v~~~~~~~~~~~~g~idilvnnAG~~ 97 (259)
T d1xq1a_ 68 LRPEREKLMQTVSSMFGGKLDILINNLGAI 97 (259)
T ss_dssp SHHHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccc
Confidence 44433222 1 23589999887643
No 185
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}
Probab=33.84 E-value=95 Score=26.17 Aligned_cols=81 Identities=15% Similarity=0.065 Sum_probs=50.1
Q ss_pred CCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHH
Q 011963 217 AKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAID 296 (474)
Q Consensus 217 g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~ 296 (474)
||=.||+..++|-|+.+|- .+.. .|-.+++..-+.+-+.++.+.+... +.++..+..+....
T Consensus 2 gKValITGas~GIG~aia~------~la~---------~Ga~V~i~~r~~~~l~~~~~~l~~~---g~~~~~~~~Dvs~~ 63 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIAR------RLGK---------EGLRVFVCARGEEGLRTTLKELREA---GVEADGRTCDVRSV 63 (257)
T ss_dssp CCEEEEESCSSHHHHHHHH------HHHH---------TTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCH
T ss_pred CCEEEEeCCCCHHHHHHHH------HHHH---------CCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeecCCH
Confidence 4445666555546665443 2333 3678777888777777777776654 56677777776655
Q ss_pred HHHHHHh------cCCCcEEEEChH
Q 011963 297 HQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 297 ~q~~~l~------~~~~~IlV~TP~ 315 (474)
.....+- -+++||||...|
T Consensus 64 ~~v~~~~~~~~~~~g~iDilVnnAG 88 (257)
T d2rhca1 64 PEIEALVAAVVERYGPVDVLVNNAG 88 (257)
T ss_dssp HHHHHHHHHHHHHTCSCSEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEeccc
Confidence 4444331 246899997765
No 186
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=33.47 E-value=5.3 Score=34.54 Aligned_cols=14 Identities=21% Similarity=0.441 Sum_probs=11.2
Q ss_pred cceEEeccccccCC
Q 011963 331 VSLLVVDRLDSLSK 344 (474)
Q Consensus 331 l~~lViDEad~ll~ 344 (474)
...+++||+|.+..
T Consensus 133 ~~~~iide~d~l~~ 146 (287)
T d1w5sa2 133 YLLVILDEFQSMLS 146 (287)
T ss_dssp EEEEEEESTHHHHS
T ss_pred ccccceeEEEEecc
Confidence 45788999999875
No 187
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=33.01 E-value=40 Score=30.12 Aligned_cols=60 Identities=8% Similarity=0.168 Sum_probs=38.2
Q ss_pred EEEEEeccHHHHHHHHHHHHhcccCCcEEEEEec-------CCC--H---HHH---HHHHhcCCCcEEEEChHHHHH
Q 011963 258 FLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHP-------GAA--I---DHQ---ITGLRSCEPEFLVSTPERLLK 319 (474)
Q Consensus 258 ~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~g-------g~~--~---~~q---~~~l~~~~~~IlV~TP~rL~~ 319 (474)
..|||+|+...|.++++.+..+.+. .+..+-+ ..+ . ... ...+..++..|||+|+..|+.
T Consensus 16 p~lvv~~~~~~A~~l~~~L~~~~~~--~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~~~iiits~~al~~ 90 (308)
T d2b2na1 16 PVVLIAPDMQNALRLHDEISQFTDQ--MVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQ 90 (308)
T ss_dssp CEEEEESSHHHHHHHHHHHHTTCSS--CEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCCSSEEEEEHHHHTB
T ss_pred CEEEEcCCHHHHHHHHHHHHhcCCC--ceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcCCceEEeechhhhh
Confidence 4599999999999999999887332 3333211 111 1 111 233444578899999988754
No 188
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.90 E-value=17 Score=26.32 Aligned_cols=27 Identities=15% Similarity=0.059 Sum_probs=24.9
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
..++++||++..++..++..|...||.
T Consensus 58 ~~~vv~~~~~g~~s~~~~~~l~~~G~~ 84 (101)
T d1yt8a2 58 DTPITVYDDGEGLAPVAAQRLHDLGYS 84 (101)
T ss_dssp TSCEEEECSSSSHHHHHHHHHHHTTCS
T ss_pred CceeeeccchhhhHHHHHHHHHHcCCC
Confidence 568999999999999999999999995
No 189
>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.77 E-value=31 Score=28.92 Aligned_cols=52 Identities=10% Similarity=-0.120 Sum_probs=38.5
Q ss_pred hHHHHHHHhcCCc-EEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccH
Q 011963 207 GIEFWKCYSSAKD-ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266 (474)
Q Consensus 207 Q~~~i~~~l~g~d-vl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~Ptr 266 (474)
..+.|..++++.| ++++|.-| |.|=+-..|++..+.+... .-..+++..|.+
T Consensus 75 ~~~~I~~~l~~~d~vfi~AGlG--GGTGtgaapviA~~ake~g------~lvvaivtlPF~ 127 (198)
T d1ofua1 75 DRERISEVLEGADMVFITTGMG--GGTGTGAAPIIAEVAKEMG------ILTVAVVTRPFP 127 (198)
T ss_dssp THHHHHHHHTTCSEEEEEEETT--SSHHHHHHHHHHHHHHHTT------CEEEEEEEECCG
T ss_pred HHHHHHHHhCCCCeEEEEecCC--CCccccHHHHHHHHHHHcC------CCEEEEEecchH
Confidence 4556677788887 55668888 7888999999999887542 244677888865
No 190
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=32.65 E-value=9.8 Score=31.58 Aligned_cols=19 Identities=16% Similarity=-0.055 Sum_probs=15.7
Q ss_pred hcCCcEEEEcCCCcchhHHH
Q 011963 215 SSAKDILETSGSSSTIVQIA 234 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTla 234 (474)
..|+-++++++.| +|||-.
T Consensus 12 ~~g~gvl~~G~sG-~GKStl 30 (176)
T d1kkma_ 12 IYGLGVLITGDSG-VGKSET 30 (176)
T ss_dssp ETTEEEEEECCTT-SCHHHH
T ss_pred ECCEEEEEEeCCC-CCHHHH
Confidence 3577899999999 999754
No 191
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=32.65 E-value=54 Score=27.93 Aligned_cols=83 Identities=20% Similarity=0.184 Sum_probs=50.9
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEE-eccHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFL-VSSQEKAAKVRSVCKPLKAFGIHTVSLHPGA 293 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil-~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~ 293 (474)
|.|+-+||+..+||-|+-+| ..+.. .|-.+++. --..+++.++...+... |.++..+..+.
T Consensus 4 L~GK~alITGas~GIG~aia------~~la~---------~G~~Vvi~~~~~~~~~~~~~~~~~~~---g~~~~~~~~D~ 65 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIA------IELGR---------RGASVVVNYGSSSKAAEEVVAELKKL---GAQGVAIQADI 65 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHH------HHHHH---------TTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHH------HHHHH---------cCCEEEEEcCCChHHHHHHHHHHHHc---CCCceEecCCC
Confidence 57898898877776666443 23333 35566554 35666667777766655 55666666666
Q ss_pred CHHHHHHHH------hcCCCcEEEEChH
Q 011963 294 AIDHQITGL------RSCEPEFLVSTPE 315 (474)
Q Consensus 294 ~~~~q~~~l------~~~~~~IlV~TP~ 315 (474)
....+...+ .-+++|+||...|
T Consensus 66 ~~~~~v~~~~~~~~~~~g~idilinnag 93 (259)
T d1ja9a_ 66 SKPSEVVALFDKAVSHFGGLDFVMSNSG 93 (259)
T ss_dssp TSHHHHHHHHHHHHHHHSCEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEeccc
Confidence 544333322 2246899998776
No 192
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}
Probab=32.42 E-value=82 Score=27.04 Aligned_cols=85 Identities=7% Similarity=0.026 Sum_probs=50.5
Q ss_pred HhcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCC
Q 011963 214 YSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGA 293 (474)
Q Consensus 214 ~l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~ 293 (474)
-+.||-+||+..|||-|+-+|-. +.. .|-.++++.-+.+-..+..+.+... .+-.+..+..+.
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~------la~---------~Ga~Vii~~r~~~~l~~~~~~l~~~--~g~~~~~~~~D~ 84 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTL------LSS---------LGAQCVIASRKMDVLKATAEQISSQ--TGNKVHAIQCDV 84 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHH------HHH---------TTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHH------HHH---------cCCEEEEEECCHHHHHHHHHHHHHh--cCCceEEEEecc
Confidence 37889999999888777765443 333 3667777777766555555544433 234444555554
Q ss_pred CHHHHHHHH------hcCCCcEEEEChH
Q 011963 294 AIDHQITGL------RSCEPEFLVSTPE 315 (474)
Q Consensus 294 ~~~~q~~~l------~~~~~~IlV~TP~ 315 (474)
........+ ..+++||||...|
T Consensus 85 ~~~~~v~~~~~~~~~~~g~iDilvnnAg 112 (294)
T d1w6ua_ 85 RDPDMVQNTVSELIKVAGHPNIVINNAA 112 (294)
T ss_dssp TCHHHHHHHHHHHHHHTCSCSEEEECCC
T ss_pred cChHHHHHHhhhhhhhccccchhhhhhh
Confidence 433332221 2247899998764
No 193
>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.30 E-value=71 Score=27.89 Aligned_cols=83 Identities=12% Similarity=0.058 Sum_probs=48.1
Q ss_pred CCcEEE----EcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecC
Q 011963 217 AKDILE----TSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPG 292 (474)
Q Consensus 217 g~dvl~----~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg 292 (474)
|-+|.+ .-||| |=|-..... ++..+.. .+...||.+-+--.+..+...+..+ |+++..++..
T Consensus 21 g~~i~~K~E~~nptG-SfK~R~a~~-~~~~a~~---------~g~~~vv~aSsGN~g~a~A~~a~~~---G~~~~i~~p~ 86 (319)
T d1p5ja_ 21 GTSVYLKMDSAQPSG-SFKIRGIGH-FCKRWAK---------QGCAHFVCSSAGNAGMAAAYAARQL---GVPATIVVPG 86 (319)
T ss_dssp TSCEEEECGGGSGGG-BTTHHHHHH-HHHHHHH---------TTCCEEEECCSSHHHHHHHHHHHHH---TCCEEEEECT
T ss_pred CCEEEEEeCCCCCCC-CcHHHHHHH-HHHHHHH---------cCCCEEEEeCCCcHHHHHHHHhhhc---cccceecccc
Confidence 557777 45888 888654322 2323322 2335566655656666665555555 6777777766
Q ss_pred CCHHHHHHHHhcCCCcEEEEC
Q 011963 293 AAIDHQITGLRSCEPEFLVST 313 (474)
Q Consensus 293 ~~~~~q~~~l~~~~~~IlV~T 313 (474)
.........+...+.++++..
T Consensus 87 ~~~~~k~~~~~~~Ga~v~~~~ 107 (319)
T d1p5ja_ 87 TTPALTIERLKNEGATCKVVG 107 (319)
T ss_dssp TCCHHHHHHHHHTTCEEEECC
T ss_pred ccccccccccccceecccccc
Confidence 555555566665566666543
No 194
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=31.67 E-value=83 Score=26.62 Aligned_cols=125 Identities=12% Similarity=0.066 Sum_probs=68.1
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||+..++|-|+..|-. +.. .|-.+++..-+.+-..+....+.. ..+.++..+..+..
T Consensus 3 l~gK~~lITGas~GIG~aia~~------la~---------~Ga~V~i~~r~~~~~~~~~~~l~~--~~g~~~~~~~~Dv~ 65 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQG------LAE---------AGCSVVVASRNLEEASEAAQKLTE--KYGVETMAFRCDVS 65 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHH------HHH---------TTCEEEEEESCHHHHHHHHHHHHH--HHCCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHH------HHH---------CCCEEEEEECCHHHHHHHHHHHHH--HhCCcEEEEEccCC
Confidence 4688888887666577765543 223 366777776666555555444332 22566666777766
Q ss_pred HHHHHHHHh------cCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC------hhHHHHHHhhCC--CCCc
Q 011963 295 IDHQITGLR------SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK------GDTLSLIRQSIS--GKPH 360 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~------~~~l~~Il~~l~--~~~q 360 (474)
...+...+- -+++||||...|-. ....+.-+=.|+.+.+++ ....+.++..+. ....
T Consensus 66 ~~~~v~~~~~~~~~~~g~iDiLVnnAG~~---------~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~ 136 (251)
T d1vl8a_ 66 NYEEVKKLLEAVKEKFGKLDTVVNAAGIN---------RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPS 136 (251)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC---------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC---------CCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccc
Confidence 544443331 24799999876521 111111122466666666 333344444443 2345
Q ss_pred EEEEE
Q 011963 361 TVVFN 365 (474)
Q Consensus 361 ~llfS 365 (474)
++.+|
T Consensus 137 Ii~i~ 141 (251)
T d1vl8a_ 137 IINIG 141 (251)
T ss_dssp EEEEC
T ss_pred ccccc
Confidence 66664
No 195
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=31.65 E-value=8.6 Score=34.88 Aligned_cols=16 Identities=6% Similarity=-0.193 Sum_probs=13.4
Q ss_pred cEEEEcCCCcchhHHHH
Q 011963 219 DILETSGSSSTIVQIAW 235 (474)
Q Consensus 219 dvl~~A~TG~SGKTlaf 235 (474)
.++.+.||| +|||...
T Consensus 54 ~~lf~Gp~G-vGKT~la 69 (315)
T d1r6bx3 54 SFLFAGPTG-VGKTEVT 69 (315)
T ss_dssp EEEEECSTT-SSHHHHH
T ss_pred EEEEECCCc-chhHHHH
Confidence 588999999 9998643
No 196
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=31.62 E-value=8.3 Score=30.57 Aligned_cols=15 Identities=7% Similarity=-0.250 Sum_probs=11.8
Q ss_pred EEEEcCCCcchhHHHH
Q 011963 220 ILETSGSSSTIVQIAW 235 (474)
Q Consensus 220 vl~~A~TG~SGKTlaf 235 (474)
++++.|.| ||||...
T Consensus 9 ivl~G~~G-sGKsT~a 23 (171)
T d1knqa_ 9 YVLMGVSG-SGKSAVA 23 (171)
T ss_dssp EEEECSTT-SCHHHHH
T ss_pred EEEECCCC-CCHHHHH
Confidence 56789999 9998543
No 197
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=31.46 E-value=8.9 Score=32.13 Aligned_cols=34 Identities=0% Similarity=-0.278 Sum_probs=22.5
Q ss_pred HHHHHHhcC-----CcEEEEcCCCcchhHHHHHHHHHHHHH
Q 011963 209 EFWKCYSSA-----KDILETSGSSSTIVQIAWIVATAADSI 244 (474)
Q Consensus 209 ~~i~~~l~g-----~dvl~~A~TG~SGKTlaf~lp~l~~l~ 244 (474)
.-+..++.| .=+++.+++| +|||. |++-++.++.
T Consensus 21 ~~LD~ll~GGl~~G~l~~i~G~~G-~GKT~-~~l~~a~~~~ 59 (258)
T d2i1qa2 21 SELDSVLGGGLESQSVTEFAGVFG-SGKTQ-IMHQSCVNLQ 59 (258)
T ss_dssp HHHHHHTTSSEETTEEEEEEESTT-SSHHH-HHHHHHHHTT
T ss_pred HHHHHhcCCCccCCeEEEEEeCCC-CCHHH-HHHHHHHHHH
Confidence 555666665 4678889999 99994 4444444443
No 198
>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.40 E-value=48 Score=31.89 Aligned_cols=65 Identities=8% Similarity=-0.050 Sum_probs=41.2
Q ss_pred CCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 217 AKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 217 g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
++.+++...| ||-|-+.++-++ .. ..+..++||.|.-..-.-...++......++++..+-|..+
T Consensus 150 ~~~~~il~aT--SGDTG~Aa~~af---~~--------~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~G~fD 214 (511)
T d1kl7a_ 150 KKQITVVGAT--SGDTGSAAIYGL---RG--------KKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGTFD 214 (511)
T ss_dssp CCCEEEEEEC--SSSHHHHHHHHH---TT--------CTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESSCHH
T ss_pred CceEEEEEec--CCCccHHHHHHh---cC--------CCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEeccChH
Confidence 3556666666 578877755554 21 25789999999754433333455555455888888888744
No 199
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=30.85 E-value=9.4 Score=30.14 Aligned_cols=17 Identities=24% Similarity=0.155 Sum_probs=13.4
Q ss_pred cCCcEEEEcCCCcchhHH
Q 011963 216 SAKDILETSGSSSTIVQI 233 (474)
Q Consensus 216 ~g~dvl~~A~TG~SGKTl 233 (474)
+.+=|+++.|.| ||||.
T Consensus 2 ~~kiI~l~G~~G-sGKsT 18 (178)
T d1qhxa_ 2 TTRMIILNGGSS-AGKSG 18 (178)
T ss_dssp CCCEEEEECCTT-SSHHH
T ss_pred CCeEEEEECCCC-CCHHH
Confidence 345578889999 99984
No 200
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=30.20 E-value=19 Score=33.24 Aligned_cols=25 Identities=16% Similarity=0.130 Sum_probs=18.3
Q ss_pred HHHHHHhcC----CcEEEEcCCCcchhHHH
Q 011963 209 EFWKCYSSA----KDILETSGSSSTIVQIA 234 (474)
Q Consensus 209 ~~i~~~l~g----~dvl~~A~TG~SGKTla 234 (474)
.++..++.| +.+++..|.| +|||+.
T Consensus 142 ~~l~~~~~~~~~~~~~~~~g~~~-~gk~~~ 170 (362)
T d1svma_ 142 DFLKCMVYNIPKKRYWLFKGPID-SGKTTL 170 (362)
T ss_dssp HHHHHHHHCCTTCCEEEEECSTT-SSHHHH
T ss_pred HHHHHHHhCCCCcCeEEEECCCC-CCHHHH
Confidence 344455555 4799999999 999953
No 201
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=30.00 E-value=36 Score=28.68 Aligned_cols=50 Identities=12% Similarity=-0.065 Sum_probs=37.1
Q ss_pred HHHHHHhcCCc-EEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccH
Q 011963 209 EFWKCYSSAKD-ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266 (474)
Q Consensus 209 ~~i~~~l~g~d-vl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~Ptr 266 (474)
..|...+.|.| ++++|.-| |.|-+-..|++..+.+... ....+++..|.+
T Consensus 91 ~~I~~~l~~~d~vfi~AGlG--GGTGsgaapvia~~ake~g------~lvv~ivtlPF~ 141 (209)
T d2vapa1 91 EEIKAAIQDSDMVFITCGLG--GGTGTGSAPVVAEISKKIG------ALTVAVVTLPFV 141 (209)
T ss_dssp HHHHHHHTTCSEEEEEEETT--SSHHHHHHHHHHHHHHHTT------CEEEEEEEECCG
T ss_pred HHHHHhccCCCEEEEEEeCC--CCccccHHHHHHHHHHHcC------CcEEEEEecchh
Confidence 34455667776 66778888 7899999999998888642 245788888976
No 202
>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=29.76 E-value=36 Score=26.50 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=28.7
Q ss_pred HHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhh-CCCc
Q 011963 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKC-KGYS 459 (474)
Q Consensus 420 lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~-~gi~ 459 (474)
.|..++......+..++|+||++=..+-..+..|.. .|++
T Consensus 76 ~~~~~~~~~gi~~d~~vV~yC~~G~~As~~~~~l~~~~G~~ 116 (141)
T d1uara2 76 ELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYP 116 (141)
T ss_dssp HHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHhCCCCCCeEEEEecCcchHHHHHHHHHHHcCCC
Confidence 344444443333478999999998888888888875 7985
No 203
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.68 E-value=10 Score=31.32 Aligned_cols=15 Identities=7% Similarity=0.025 Sum_probs=12.7
Q ss_pred CcEEEEcCCCcchhHH
Q 011963 218 KDILETSGSSSTIVQI 233 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTl 233 (474)
|-++++.|+| ||||-
T Consensus 1 rpIvl~GPsG-sGK~t 15 (190)
T d1lvga_ 1 RPVVLSGPSG-AGKST 15 (190)
T ss_dssp CCEEEECCTT-SSHHH
T ss_pred CeEEEECCCC-CCHHH
Confidence 3478999999 99986
No 204
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.01 E-value=10 Score=30.78 Aligned_cols=16 Identities=6% Similarity=-0.010 Sum_probs=13.8
Q ss_pred CCcEEEEcCCCcchhHH
Q 011963 217 AKDILETSGSSSTIVQI 233 (474)
Q Consensus 217 g~dvl~~A~TG~SGKTl 233 (474)
|+=++++.|+| +|||-
T Consensus 2 G~iivl~GpsG-~GK~t 17 (182)
T d1znwa1 2 GRVVVLSGPSA-VGKST 17 (182)
T ss_dssp CCEEEEECSTT-SSHHH
T ss_pred CeEEEEECCCC-CCHHH
Confidence 56688999999 99986
No 205
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=28.83 E-value=6.3 Score=31.33 Aligned_cols=19 Identities=11% Similarity=-0.083 Sum_probs=15.3
Q ss_pred hcCCcEEEEcCCCcchhHHH
Q 011963 215 SSAKDILETSGSSSTIVQIA 234 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTla 234 (474)
..|.-|+++.+.| ||||..
T Consensus 4 ~~g~~I~l~G~~G-sGKTTi 22 (183)
T d1m8pa3 4 TQGFTIFLTGYMN-SGKDAI 22 (183)
T ss_dssp TCCEEEEEECSTT-SSHHHH
T ss_pred CCCeEEEEECCCC-CCHHHH
Confidence 4566788999999 999954
No 206
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}
Probab=28.80 E-value=88 Score=26.40 Aligned_cols=82 Identities=13% Similarity=0.034 Sum_probs=49.9
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
|.||-+||+..++|-|+-+|- .+.. .|-.+++..-+.+.+.++.+.+.. +-++..+..+..
T Consensus 4 L~gK~alVTGas~GIG~aia~------~la~---------~Ga~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~ 64 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIAT------KFVE---------EGAKVMITGRHSDVGEKAAKSVGT----PDQIQFFQHDSS 64 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHH------HHHH---------TTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHH------HHHH---------CCCEEEEEECCHHHHHHHHHHhCC----CCcEEEEEccCC
Confidence 568888888766656665443 2333 377888888787777766655432 224555666655
Q ss_pred HHHHHHHHh------cCCCcEEEEChH
Q 011963 295 IDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
...+...+- -+++||||...|
T Consensus 65 ~~~~v~~~~~~~~~~~G~iDiLVnnAg 91 (251)
T d1zk4a1 65 DEDGWTKLFDATEKAFGPVSTLVNNAG 91 (251)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCceEEEeccc
Confidence 444333221 147999998764
No 207
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=28.78 E-value=18 Score=30.62 Aligned_cols=17 Identities=18% Similarity=-0.226 Sum_probs=14.2
Q ss_pred cCCcEEEEcCCCcchhHH
Q 011963 216 SAKDILETSGSSSTIVQI 233 (474)
Q Consensus 216 ~g~dvl~~A~TG~SGKTl 233 (474)
.++.+++.+|.| +|||.
T Consensus 28 ~~~~i~i~G~~G-~GKTs 44 (283)
T d2fnaa2 28 RAPITLVLGLRR-TGKSS 44 (283)
T ss_dssp CSSEEEEEESTT-SSHHH
T ss_pred cCCEEEEEcCCC-CcHHH
Confidence 346788999999 99994
No 208
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=28.58 E-value=1.1e+02 Score=25.99 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=18.6
Q ss_pred EEEEEecCCCHHHHHHHHhcCCCcEEEECh
Q 011963 285 HTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314 (474)
Q Consensus 285 ~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP 314 (474)
++..+..+.....+...+...++.|||+|=
T Consensus 136 r~LlVLDDv~~~~~~~~~~~~~srilvTTR 165 (277)
T d2a5yb3 136 NTLFVFDDVVQEETIRWAQELRLRCLVTTR 165 (277)
T ss_dssp TEEEEEEEECCHHHHHHHHHTTCEEEEEES
T ss_pred CeeEecchhhHHhhhhhhcccCceEEEEee
Confidence 455555555555555555544788998884
No 209
>d1ne7a_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.30 E-value=46 Score=29.22 Aligned_cols=61 Identities=16% Similarity=0.194 Sum_probs=36.2
Q ss_pred EEEeccHHHHHH-----HHHHHHhc--ccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHH----HHcCCCCC
Q 011963 260 LFLVSSQEKAAK-----VRSVCKPL--KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKL----VSLKAIDV 328 (474)
Q Consensus 260 lil~PtreLa~Q-----i~~~~~~l--~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~l----l~~~~~~l 328 (474)
|+|+++.+=+.+ +.+.+... ...+.-+..+.||.+ |..+.+. .....+++
T Consensus 3 iii~~d~~e~s~~aA~~i~~~I~~~~~~~~~~~~i~lsGGsT-------------------P~~~y~~L~~~~~~~~i~w 63 (281)
T d1ne7a_ 3 LIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGST-------------------PLGCYKKLIEYYKNGDLSF 63 (281)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSHH-------------------HHHHHHHHHHHHHTTSCCC
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHhccccCCCEEEEECCCcC-------------------HHHHHHHHHHHHhccCCCh
Confidence 677777655443 33333222 112344556777743 4444443 35678999
Q ss_pred CCcceEEeccc
Q 011963 329 SGVSLLVVDRL 339 (474)
Q Consensus 329 ~~l~~lViDEa 339 (474)
+++.++.+||-
T Consensus 64 ~~v~if~~DEr 74 (281)
T d1ne7a_ 64 KYVKTFNMDEY 74 (281)
T ss_dssp TTEEEEESEEE
T ss_pred hHeEEEeccee
Confidence 99999999993
No 210
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.13 E-value=11 Score=30.82 Aligned_cols=13 Identities=0% Similarity=-0.128 Sum_probs=11.0
Q ss_pred EEEEcCCCcchhHH
Q 011963 220 ILETSGSSSTIVQI 233 (474)
Q Consensus 220 vl~~A~TG~SGKTl 233 (474)
+|++.+.| ||||.
T Consensus 17 iil~G~pG-sGKST 29 (172)
T d1yj5a2 17 VVAVGFPG-AGKST 29 (172)
T ss_dssp EEEECCTT-SSHHH
T ss_pred EEEECCCC-CCHHH
Confidence 57788999 99994
No 211
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.75 E-value=29 Score=29.96 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=29.8
Q ss_pred CCcEEEEEccc--------------hhHHHHHHHHhhCCCcccchH-------HHHHHHhh
Q 011963 433 PLKVLYIVGKD--------------SKFQNLVSTLKCKGYSISTGS-------NCIVSHIK 472 (474)
Q Consensus 433 ~~k~LVF~~s~--------------~~a~~l~~~L~~~gi~v~~~r-------~~~i~~Fk 472 (474)
.+-+||++|.. .+++.|+..|+..||.|.... ..++.+|.
T Consensus 26 rG~aLII~N~~f~~~~~l~~r~g~~~Da~~l~~~l~~lGF~V~~~~nlt~~em~~~l~~f~ 86 (257)
T g1pyo.1 26 RGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEMQEKLQNFA 86 (257)
T ss_dssp SEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHH
T ss_pred CCEEEEEeCccCCCccCCCCCCCcHHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHH
Confidence 44689998742 599999999999999998322 24566664
No 212
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.43 E-value=12 Score=30.72 Aligned_cols=15 Identities=7% Similarity=-0.051 Sum_probs=12.9
Q ss_pred CcEEEEcCCCcchhHH
Q 011963 218 KDILETSGSSSTIVQI 233 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTl 233 (474)
+=++++.|+| +|||.
T Consensus 4 k~ivl~Gpsg-~GK~t 18 (178)
T d1kgda_ 4 KTLVLLGAHG-VGRRH 18 (178)
T ss_dssp CEEEEECCTT-SSHHH
T ss_pred CcEEEECCCC-CCHHH
Confidence 4578999999 99985
No 213
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=26.43 E-value=1.4e+02 Score=24.95 Aligned_cols=58 Identities=16% Similarity=0.086 Sum_probs=38.1
Q ss_pred CCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHh------cCCCcEEEEChH
Q 011963 255 TGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 255 ~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
.|-.+++..-+.+-+.++.+.+... +.++..+..+.....+...+- -+++||||...|
T Consensus 24 ~Ga~V~~~~r~~~~l~~~~~~i~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG 87 (255)
T d1gega_ 24 DGFAVAIADYNDATAKAVASEINQA---GGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAG 87 (255)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeccc
Confidence 3667777777777777776666654 556667777766555544331 247999997655
No 214
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=26.20 E-value=15 Score=30.23 Aligned_cols=19 Identities=16% Similarity=-0.045 Sum_probs=15.8
Q ss_pred hcCCcEEEEcCCCcchhHHH
Q 011963 215 SSAKDILETSGSSSTIVQIA 234 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTla 234 (474)
..|+-|+++++.| +|||-.
T Consensus 13 ~~g~gvli~G~sg-~GKS~l 31 (169)
T d1ko7a2 13 VYGVGVLITGDSG-IGKSET 31 (169)
T ss_dssp ETTEEEEEEESTT-SSHHHH
T ss_pred ECCEEEEEEeCCC-CCHHHH
Confidence 3577899999999 999843
No 215
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=25.97 E-value=21 Score=30.84 Aligned_cols=20 Identities=15% Similarity=0.062 Sum_probs=16.0
Q ss_pred HhcCCcEEEEcCCCcchhHHH
Q 011963 214 YSSAKDILETSGSSSTIVQIA 234 (474)
Q Consensus 214 ~l~g~dvl~~A~TG~SGKTla 234 (474)
......|++..++| ||||+.
T Consensus 20 a~~~~pvlI~Ge~G-tGK~~~ 39 (247)
T d1ny5a2 20 SCAECPVLITGESG-VGKEVV 39 (247)
T ss_dssp TTCCSCEEEECSTT-SSHHHH
T ss_pred hCCCCCEEEECCCC-cCHHHH
Confidence 34556899999999 999853
No 216
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.93 E-value=1.1e+02 Score=26.04 Aligned_cols=83 Identities=13% Similarity=0.057 Sum_probs=46.1
Q ss_pred cCCcE-EEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 216 SAKDI-LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 216 ~g~dv-l~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+|+-| ||+..++|-|+.+|..| ... .+-.+++..-+.+-+.++.+.++.. +.++..+..+..
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~l------a~~--------~g~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dvs 63 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDL------CRL--------FSGDVVLTARDVTRGQAAVQQLQAE---GLSPRFHQLDID 63 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHH------HHH--------SSSEEEEEESSHHHHHHHHHHHHHT---TCCCEEEECCTT
T ss_pred CCCeEEEECCCCCHHHHHHHHHH------HHh--------CCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEEecC
Confidence 46666 44444443666555433 221 2557777777777777777766654 333444555554
Q ss_pred HHHHHHHH----h--cCCCcEEEEChH
Q 011963 295 IDHQITGL----R--SCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l----~--~~~~~IlV~TP~ 315 (474)
....+..+ . -+++||||..-|
T Consensus 64 ~~~sv~~~~~~~~~~~g~iDiLVnNAG 90 (275)
T d1wmaa1 64 DLQSIRALRDFLRKEYGGLDVLVNNAG 90 (275)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 33333222 1 246899997765
No 217
>d1em8a_ c.128.1.1 (A:) DNA polymerase III chi subunit {Escherichia coli [TaxId: 562]}
Probab=25.56 E-value=37 Score=26.72 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHH
Q 011963 415 LKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTL 453 (474)
Q Consensus 415 ~~l~~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L 453 (474)
..+..++...+.. +.+++|+|.+.+.++.|-+.|
T Consensus 23 ~~~crL~~K~~~~-----g~ri~I~~~d~~~~~~lD~~L 56 (147)
T d1em8a_ 23 QLVCEIAAERWRS-----GKRVLIACEDEKQAYRLDEAL 56 (147)
T ss_dssp HHHHHHHHHHHHT-----TCCEEEECSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHHH
Confidence 3455667777665 459999999999999999999
No 218
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.49 E-value=98 Score=22.76 Aligned_cols=83 Identities=13% Similarity=0.193 Sum_probs=47.6
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCCcEEEEChHHHHHHHHcCCCCCCCcceEE
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLV 335 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lV 335 (474)
.|++||+=....+...+...+... |+.+.....| ...++++... ..+++|
T Consensus 2 tp~ILiVDDd~~~~~~l~~~L~~~---g~~v~~a~~~----------------------~~al~~l~~~-----~~dlii 51 (121)
T d1xhfa1 2 TPHILIVEDELVTRNTLKSIFEAE---GYDVFEATDG----------------------AEMHQILSEY-----DINLVI 51 (121)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTT---TCEEEEESSH----------------------HHHHHHHHHS-----CCSEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHC---CCEEEEECCh----------------------HHHHHHHHhc-----CCCEEE
Confidence 468888888888888777777665 5666554433 2223333332 234566
Q ss_pred eccccccCC--hhHHHHHHhhCCCCCcEEEEEccCCcc
Q 011963 336 VDRLDSLSK--GDTLSLIRQSISGKPHTVVFNDCLTYT 371 (474)
Q Consensus 336 iDEad~ll~--~~~l~~Il~~l~~~~q~llfSAT~~~~ 371 (474)
+|= .|-+ .-++...++.. .+.+++++|+.-...
T Consensus 52 ~D~--~mp~~~G~~~~~~~r~~-~~~pii~lt~~~~~~ 86 (121)
T d1xhfa1 52 MDI--NLPGKNGLLLARELREQ-ANVALMFLTGRDNEV 86 (121)
T ss_dssp ECS--SCSSSCHHHHHHHHHHH-CCCEEEEEESCCSHH
T ss_pred eec--ccCCccCcHHHHHHHhc-CCCcEEEEECCCCHH
Confidence 662 2333 33333334443 368899999875543
No 219
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=25.46 E-value=12 Score=29.58 Aligned_cols=21 Identities=14% Similarity=0.208 Sum_probs=13.9
Q ss_pred CCcEEEEEccchhHHHHHHHH
Q 011963 433 PLKVLYIVGKDSKFQNLVSTL 453 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L 453 (474)
..++.+..++....++++..+
T Consensus 165 ~~~~~~v~~~~~~~ee~~~ei 185 (190)
T d1khta_ 165 GATVKIVQNRNGLLDQAVEEL 185 (190)
T ss_dssp CCEEEEEECCTTCHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHH
Confidence 345666677777777776655
No 220
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=24.91 E-value=13 Score=30.38 Aligned_cols=14 Identities=0% Similarity=0.033 Sum_probs=11.9
Q ss_pred cEEEEcCCCcchhHH
Q 011963 219 DILETSGSSSTIVQI 233 (474)
Q Consensus 219 dvl~~A~TG~SGKTl 233 (474)
-+++..|.| ||||.
T Consensus 5 ~I~i~GppG-sGKsT 18 (189)
T d1zaka1 5 KVMISGAPA-SGKGT 18 (189)
T ss_dssp CEEEEESTT-SSHHH
T ss_pred EEEEECCCC-CCHHH
Confidence 378899999 99975
No 221
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.82 E-value=1.1e+02 Score=25.78 Aligned_cols=79 Identities=10% Similarity=0.084 Sum_probs=46.1
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||+..++|-|+.+|-. +.. .|-.++++.-..+.+.++.+.+. .+..+..+..
T Consensus 4 l~GK~alITGas~GIG~aia~~------la~---------~Ga~V~i~~r~~~~~~~~~~~~~-------~~~~~~~Dvs 61 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRA------FVN---------SGARVVICDKDESGGRALEQELP-------GAVFILCDVT 61 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHH------HHH---------TTCEEEEEESCHHHHHHHHHHCT-------TEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHH------HHH---------CCCEEEEEECCHHHHHHHHHhcC-------CCeEEEccCC
Confidence 4788899987776677765443 222 36677777666665555443321 1334455555
Q ss_pred HHHHHHHHh------cCCCcEEEEChH
Q 011963 295 IDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
...++..+- -+++||||...|
T Consensus 62 ~~~~v~~~~~~~~~~~g~iDilVnnAG 88 (250)
T d1ydea1 62 QEDDVKTLVSETIRRFGRLDCVVNNAG 88 (250)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEeccc
Confidence 444433331 147999998876
No 222
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.74 E-value=1.3e+02 Score=25.14 Aligned_cols=84 Identities=13% Similarity=0.043 Sum_probs=50.2
Q ss_pred cCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCH
Q 011963 216 SAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAI 295 (474)
Q Consensus 216 ~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~ 295 (474)
+||-+||+..++|-|+.+|-.+ .. .|-.++++.-..+-..+....+... ..+.++..+..+...
T Consensus 2 ~GKvalITGas~GIG~aia~~l------a~---------~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~ 65 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEAL------LL---------KGAKVALVDWNLEAGVQCKAALHEQ-FEPQKTLFIQCDVAD 65 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH------HH---------TTCEEEEEESCHHHHHHHHHHHTTT-SCGGGEEEEECCTTS
T ss_pred CCCEEEEeCCCCHHHHHHHHHH------HH---------CCCEEEEEECCHHHHHHHHHHHHHh-cCCCcEEEEEeecCC
Confidence 5888888877665777655432 22 3667777776666655555554432 124566666667665
Q ss_pred HHHHHHHh------cCCCcEEEEChH
Q 011963 296 DHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 296 ~~q~~~l~------~~~~~IlV~TP~ 315 (474)
..++..+- -+++||||..-|
T Consensus 66 ~~~v~~~~~~~~~~~G~iDilVnnAg 91 (254)
T d2gdza1 66 QQQLRDTFRKVVDHFGRLDILVNNAG 91 (254)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCcCeeccccc
Confidence 44443331 247899997653
No 223
>d1o5za1 c.59.1.2 (A:294-430) Folylpolyglutamate synthetase, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.67 E-value=54 Score=24.78 Aligned_cols=52 Identities=8% Similarity=0.036 Sum_probs=36.6
Q ss_pred eEEeccccccCC-hhHHHHHHhhCCCCCcEEEEEccCCccHHHHHHHhhcCCc
Q 011963 333 LLVVDRLDSLSK-GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSI 384 (474)
Q Consensus 333 ~lViDEad~ll~-~~~l~~Il~~l~~~~q~llfSAT~~~~v~~l~~~~l~~p~ 384 (474)
.+|+|-||.... ...+..+....+..+-+++|+.+-..+...++..+.....
T Consensus 12 ~iilD~AHN~~a~~~l~~~l~~~~~~~~~~~i~g~~~dkd~~~~l~~l~~~~~ 64 (137)
T d1o5za1 12 MYILDGAHNPHGAESLVRSLKLYFNGEPLSLVIGILDDKNREDILRKYTGIFE 64 (137)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHHCTTCCEEEEECCCTTSCHHHHHGGGTTTCS
T ss_pred EEEEECCCCHHHHHHHHHHHHhhhccccceeeecccccccHHHHHHHHHhhcc
Confidence 478999998776 4445555555566667778887777778877777665543
No 224
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=24.46 E-value=29 Score=29.52 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=25.1
Q ss_pred CcceEEeccccccCC---hhHHHHHHhhCC-CCCcEEEEE
Q 011963 330 GVSLLVVDRLDSLSK---GDTLSLIRQSIS-GKPHTVVFN 365 (474)
Q Consensus 330 ~l~~lViDEad~ll~---~~~l~~Il~~l~-~~~q~llfS 365 (474)
...+|+|||...-|+ ...+..+++.+. ...|+++.|
T Consensus 225 ~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~T 264 (292)
T g1f2t.1 225 EISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVS 264 (292)
T ss_dssp SCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEE
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 345899999999999 555666666654 335777653
No 225
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=24.36 E-value=13 Score=29.87 Aligned_cols=13 Identities=15% Similarity=-0.072 Sum_probs=10.2
Q ss_pred EE-EEcCCCcchhHH
Q 011963 220 IL-ETSGSSSTIVQI 233 (474)
Q Consensus 220 vl-~~A~TG~SGKTl 233 (474)
+| +++|+| ||||.
T Consensus 24 iIgI~G~~G-SGKST 37 (198)
T d1rz3a_ 24 VLGIDGLSR-SGKTT 37 (198)
T ss_dssp EEEEEECTT-SSHHH
T ss_pred EEEEECCCC-CCHHH
Confidence 44 678999 99984
No 226
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=24.00 E-value=46 Score=28.35 Aligned_cols=22 Identities=5% Similarity=-0.029 Sum_probs=15.9
Q ss_pred hcCCcEEEEcCCCcchhHHHHH
Q 011963 215 SSAKDILETSGSSSTIVQIAWI 236 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~ 236 (474)
-.|+-|++.+.=||.|||..-.
T Consensus 17 ~~~~~iii~sGKGGVGKTT~a~ 38 (279)
T d1ihua2 17 RNEHGLIMLMGKGGVGKTTMAA 38 (279)
T ss_dssp TTSCEEEEEECSTTSSHHHHHH
T ss_pred cCCCEEEEEECCCCCCHHHHHH
Confidence 3456778887777799997543
No 227
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.83 E-value=41 Score=29.78 Aligned_cols=13 Identities=0% Similarity=-0.222 Sum_probs=9.6
Q ss_pred EEcCCCcchhH-HHH
Q 011963 222 ETSGSSSTIVQ-IAW 235 (474)
Q Consensus 222 ~~A~TG~SGKT-laf 235 (474)
+++++| |||| +|.
T Consensus 32 i~G~qG-SGKSTl~~ 45 (286)
T d1odfa_ 32 FSGPQG-SGKSFTSI 45 (286)
T ss_dssp EECCTT-SSHHHHHH
T ss_pred eECCCC-CCHHHHHH
Confidence 457999 9998 443
No 228
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}
Probab=23.48 E-value=1.1e+02 Score=25.83 Aligned_cols=81 Identities=16% Similarity=0.140 Sum_probs=45.7
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
|.||-+||+..++|-|+.+|- .+.. .|-.+++..-+.+-+.++... + +-++..+..+..
T Consensus 4 L~gK~alITGas~GIG~aia~------~la~---------~Ga~V~~~~~~~~~~~~~~~~---~---~~~~~~~~~Dv~ 62 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVK------LLLG---------EGAKVAFSDINEAAGQQLAAE---L---GERSMFVRHDVS 62 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHH------HHHH---------TTCEEEEECSCHHHHHHHHHH---H---CTTEEEECCCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHH------HHHH---------CCCEEEEEECCHHHHHHHHHH---h---CCCeEEEEeecC
Confidence 578888887666556665443 2333 366777666666555554443 3 233444555544
Q ss_pred HHHHHHHH------hcCCCcEEEEChHH
Q 011963 295 IDHQITGL------RSCEPEFLVSTPER 316 (474)
Q Consensus 295 ~~~q~~~l------~~~~~~IlV~TP~r 316 (474)
.......+ .-+++||||...|.
T Consensus 63 ~~~~~~~~~~~~~~~~g~iDilVnnAG~ 90 (253)
T d1hxha_ 63 SEADWTLVMAAVQRRLGTLNVLVNNAGI 90 (253)
T ss_dssp CHHHHHHHHHHHHHHHCSCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEecccc
Confidence 33333322 11479999988763
No 229
>d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.01 E-value=1.3e+02 Score=21.73 Aligned_cols=51 Identities=12% Similarity=0.095 Sum_probs=27.7
Q ss_pred cEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCC
Q 011963 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEP 307 (474)
Q Consensus 257 ~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~ 307 (474)
.+++||.-+.+-..........|...|+++..-.++.+...++......|+
T Consensus 8 ~Qv~iipi~~~~~~~a~~i~~~Lr~~gi~v~~d~~~~~l~~ki~~a~~~g~ 58 (110)
T d1qf6a1 8 VQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 58 (110)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHTTTCCEEEECCSSCHHHHHHHHHHTTC
T ss_pred ceEEEEeccHHHHHHHHHHHHHHHHhhccccccCCccchhHHHHHHHHcCC
Confidence 344444333332222333444455558888887777777777665544343
No 230
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=22.96 E-value=1.2e+02 Score=21.22 Aligned_cols=56 Identities=16% Similarity=0.139 Sum_probs=30.9
Q ss_pred EEEecc-HHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCCc-EEEEChH
Q 011963 260 LFLVSS-QEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPE-FLVSTPE 315 (474)
Q Consensus 260 lil~Pt-reLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~~-IlV~TP~ 315 (474)
++|+|. .++.......+..|...|+++..-+++.+...+.......++. +||--+.
T Consensus 7 v~ii~~~~~~~~~a~~i~~~Lr~~gi~v~~d~~~~~l~kq~~~A~~~~~~~~iiiG~~ 64 (95)
T d1qe0a1 7 LFIVTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQ 64 (95)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHTTTCCEEECCSCCCHHHHHHHHHHTTCSEEEEECHH
T ss_pred EEEEEeCHHHHHHHHHHHHHHHHCCCcEEecCCCCCHHHHHHHHHhcCCCEEEEEccc
Confidence 344453 3333333333344444588888778887888877766554544 4444443
No 231
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.57 E-value=10 Score=30.64 Aligned_cols=16 Identities=13% Similarity=-0.168 Sum_probs=12.5
Q ss_pred CcEEEEcCCCcchhHHH
Q 011963 218 KDILETSGSSSTIVQIA 234 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTla 234 (474)
.-++++.+.| ||||..
T Consensus 20 ~vI~L~G~pG-SGKTTi 35 (195)
T d1x6va3 20 CTVWLTGLSG-AGKTTV 35 (195)
T ss_dssp EEEEEESSCH-HHHHHH
T ss_pred eEEEEECCCC-CCHHHH
Confidence 3566889999 999853
No 232
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=22.56 E-value=1.5e+02 Score=22.21 Aligned_cols=49 Identities=22% Similarity=0.255 Sum_probs=29.7
Q ss_pred ChHHHHHHHHcCCCCCCCcceEEeccccccCC---hhHHHHHHhhCCCCCcEEEEEccCC
Q 011963 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLT 369 (474)
Q Consensus 313 TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~---~~~l~~Il~~l~~~~q~llfSAT~~ 369 (474)
|+...+.++.... ..++++|- .|.+ .+.+..|.. ..++.++|++||.-.
T Consensus 32 ~~~eAl~~l~~~~-----~dlvilD~--~mp~~~G~e~~~~lr~-~~~~~piI~lT~~~~ 83 (137)
T d1ny5a1 32 RGKEAYKLLSEKH-----FNVVLLDL--LLPDVNGLEILKWIKE-RSPETEVIVITGHGT 83 (137)
T ss_dssp SHHHHHHHHHHSC-----CSEEEEES--BCSSSBHHHHHHHHHH-HCTTSEEEEEEETTC
T ss_pred CHHHHHHHhhccc-----cccchHHH--hhhhhhHHHHHHHHHH-hCCCCCEEEEECCCC
Confidence 3444555555433 45788883 4555 555555544 456789999999643
No 233
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=22.39 E-value=38 Score=29.28 Aligned_cols=44 Identities=14% Similarity=0.190 Sum_probs=31.0
Q ss_pred CCCcceEEeccccccCC---hhHHHHHHhhCCCCCcEEEEEccCCccHH
Q 011963 328 VSGVSLLVVDRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLTYTSV 373 (474)
Q Consensus 328 l~~l~~lViDEad~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~~v~ 373 (474)
...-.+++|||.+.-+. ...+..++.....+.|+++. |-++.+.
T Consensus 239 ~~~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~~~Qviit--THsp~~~ 285 (308)
T d1e69a_ 239 IKPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVI--THNKIVM 285 (308)
T ss_dssp TSCCSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEE--CCCTTGG
T ss_pred hccCchhhhhhccccCCHHHHHHHHHHHHHhccCCEEEEE--ECCHHHH
Confidence 34456899999998888 55555566666678998874 6666544
No 234
>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.36 E-value=62 Score=26.84 Aligned_cols=52 Identities=8% Similarity=-0.136 Sum_probs=37.8
Q ss_pred hHHHHHHHhcCCc-EEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccH
Q 011963 207 GIEFWKCYSSAKD-ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266 (474)
Q Consensus 207 Q~~~i~~~l~g~d-vl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~Ptr 266 (474)
..+.|..++++-| ++++|.-| |.|=+-..|++..+.+... --..++|..|..
T Consensus 75 ~~~~I~~~l~~~d~vfi~AGlG--GgTGtGaaPviA~iake~g------~l~v~ivt~PF~ 127 (198)
T d1rq2a1 75 AKDEIEELLRGADMVFVTAGEG--GGTGTGGAPVVASIARKLG------ALTVGVVTRPFS 127 (198)
T ss_dssp THHHHHHHHTTCSEEEEEEETT--SSHHHHHHHHHHHHHHHHT------CEEEEEEEECCG
T ss_pred HHHHHHHHhcCCCEEEEEEecC--CCCCcchHHHHHHHHHHcC------CcEEEEEecChH
Confidence 4556667778887 55668888 6788888999998888642 244677888865
No 235
>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.10 E-value=23 Score=28.17 Aligned_cols=27 Identities=7% Similarity=0.012 Sum_probs=24.4
Q ss_pred CCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 433 PLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 433 ~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
..++||||++...+...+..|...|+.
T Consensus 58 ~~~vv~~c~~g~rs~~~a~~l~~~G~~ 84 (157)
T d1yt8a3 58 AERYVLTCGSSLLARFAVAEVQALSGK 84 (157)
T ss_dssp CSEEEEECSSSHHHHHHHHHHHHHHCS
T ss_pred CcceeeccCCcchHHHHHHHHhcccCc
Confidence 679999999999999999999988874
No 236
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}
Probab=22.00 E-value=1.3e+02 Score=25.20 Aligned_cols=123 Identities=12% Similarity=0.028 Sum_probs=64.6
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||+..++|-|+.+|-. +.. .|-.+++..-+.+-+.++.+.+.. ++..+..+..
T Consensus 2 l~gK~alITGas~GIG~a~a~~------l~~---------~G~~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~Dv~ 60 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAET------LAA---------RGAKVIGTATSENGAQAISDYLGA------NGKGLMLNVT 60 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHH------HHH---------TTCEEEEEESSHHHHHHHHHHHGG------GEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHH------HHH---------cCCEEEEEeCCHHHHHHHHHHhCC------CCcEEEEEec
Confidence 4678888876666577765432 333 366777777777666665554421 2333444544
Q ss_pred HHHHHHHH------hcCCCcEEEEChHHHHHHHHcCCCCCCCcceEEeccccccCC------hhHHHHHHhhCC--CCCc
Q 011963 295 IDHQITGL------RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK------GDTLSLIRQSIS--GKPH 360 (474)
Q Consensus 295 ~~~q~~~l------~~~~~~IlV~TP~rL~~ll~~~~~~l~~l~~lViDEad~ll~------~~~l~~Il~~l~--~~~q 360 (474)
...+...+ .-+++||||...|. .....+.-+=.|+.+.+++ ....+.++..+. ..-.
T Consensus 61 ~~~~v~~~~~~~~~~~g~iDilVnnAg~---------~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~ 131 (243)
T d1q7ba_ 61 DPASIESVLEKIRAEFGEVDILVNNAGI---------TRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGR 131 (243)
T ss_dssp CHHHHHHHHHHHHHHTCSCSEEEECCCC---------CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CHHHhhhhhhhhhcccCCcceehhhhhh---------ccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCE
Confidence 33333222 12479999987642 1222233334566777766 222233333331 2345
Q ss_pred EEEEEcc
Q 011963 361 TVVFNDC 367 (474)
Q Consensus 361 ~llfSAT 367 (474)
++.+|..
T Consensus 132 II~isS~ 138 (243)
T d1q7ba_ 132 IITIGSV 138 (243)
T ss_dssp EEEECCH
T ss_pred eeeecch
Confidence 6666643
No 237
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}
Probab=21.84 E-value=61 Score=26.78 Aligned_cols=52 Identities=8% Similarity=-0.158 Sum_probs=37.9
Q ss_pred hHHHHHHHhcCCc-EEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccH
Q 011963 207 GIEFWKCYSSAKD-ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266 (474)
Q Consensus 207 Q~~~i~~~l~g~d-vl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~Ptr 266 (474)
..+.|..++.+.| ++++|.-| |.|=+-..|++..+.+... ....+++..|..
T Consensus 74 ~~~~I~~~l~~~d~vfi~AGlG--GgTGtgaapviA~~ake~g------~lvv~ivtlPF~ 126 (194)
T d1w5fa1 74 SEEKIREVLQDTHMVFITAGFG--GGTGTGASPVIAKIAKEMG------ILTVAIVTTPFY 126 (194)
T ss_dssp THHHHHHHTTTCSEEEEEEETT--SSHHHHHHHHHHHHHHHTT------CEEEEEEEECCG
T ss_pred HHHHHHHHhcCCCeEEEEEecC--CCcccchHHHHHHHHHHcC------CceEEEEeechh
Confidence 4555667778877 55667887 7788889999999887642 245777888865
No 238
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.59 E-value=16 Score=29.79 Aligned_cols=13 Identities=15% Similarity=0.089 Sum_probs=11.0
Q ss_pred EEEEcCCCcchhHH
Q 011963 220 ILETSGSSSTIVQI 233 (474)
Q Consensus 220 vl~~A~TG~SGKTl 233 (474)
+++..|.| ||||.
T Consensus 11 I~i~GppG-SGKsT 23 (196)
T d1ukza_ 11 IFVLGGPG-AGKGT 23 (196)
T ss_dssp EEEECSTT-SSHHH
T ss_pred EEEECCCC-CCHHH
Confidence 67789999 99974
No 239
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}
Probab=21.52 E-value=56 Score=27.85 Aligned_cols=84 Identities=17% Similarity=0.140 Sum_probs=48.4
Q ss_pred hcCCcEEEEcCCCcchhHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEecCCC
Q 011963 215 SSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294 (474)
Q Consensus 215 l~g~dvl~~A~TG~SGKTlaf~lp~l~~l~~~~~~~~~~~~~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~ 294 (474)
+.||-+||...++|-|+.+|-. +.. .|-.++++.-..+-..+....+.. ..+.++..+..+..
T Consensus 7 l~gK~alITGas~GIG~aia~~------la~---------~Ga~V~i~~r~~~~~~~~~~~~~~--~~g~~~~~~~~Dv~ 69 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRA------VAA---------AGANVAVIYRSAADAVEVTEKVGK--EFGVKTKAYQCDVS 69 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHH------HHH---------TTEEEEEEESSCTTHHHHHHHHHH--HHTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHH------HHH---------CCCEEEEEECCHHHHHHHHHHHHH--HhCCceEEEEccCC
Confidence 4688888887776677765543 333 366766666554433333333322 22556667777766
Q ss_pred HHHHHHHHh------cCCCcEEEEChH
Q 011963 295 IDHQITGLR------SCEPEFLVSTPE 315 (474)
Q Consensus 295 ~~~q~~~l~------~~~~~IlV~TP~ 315 (474)
.......+- -+++||||...|
T Consensus 70 ~~~~v~~~~~~~~~~~g~iDilVnnAg 96 (260)
T d1h5qa_ 70 NTDIVTKTIQQIDADLGPISGLIANAG 96 (260)
T ss_dssp CHHHHHHHHHHHHHHSCSEEEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCcEeccccc
Confidence 555444332 246899997654
No 240
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=21.28 E-value=50 Score=28.66 Aligned_cols=28 Identities=7% Similarity=-0.231 Sum_probs=19.2
Q ss_pred hHHHHHHHhc-C-----CcEEEEcCCCcchhHHHH
Q 011963 207 GIEFWKCYSS-A-----KDILETSGSSSTIVQIAW 235 (474)
Q Consensus 207 Q~~~i~~~l~-g-----~dvl~~A~TG~SGKTlaf 235 (474)
-..++..++. | +=+.+..|.| ||||...
T Consensus 38 G~~~lD~~Lg~GGi~~g~itei~G~~g-sGKTtl~ 71 (263)
T d1u94a1 38 GSLSLDIALGAGGLPMGRIVEIYGPES-SGKTTLT 71 (263)
T ss_dssp SCHHHHHHTSSSSEETTSEEEEECSTT-SSHHHHH
T ss_pred CCHHHHHHhcCCCccCceEEEEecCCC-cHHHHHH
Confidence 3455666664 3 4577888999 9999543
No 241
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=20.96 E-value=83 Score=22.30 Aligned_cols=34 Identities=9% Similarity=0.081 Sum_probs=22.1
Q ss_pred HHHHhcccCCcEEEEEecCCCHHHHHHHHhcCCC
Q 011963 274 SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEP 307 (474)
Q Consensus 274 ~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~~~~~ 307 (474)
..+..|...|+++..-+++.+...++......++
T Consensus 21 ~l~~~Lr~~gi~v~~d~~~~~l~kq~~~A~~~~~ 54 (97)
T d1wu7a1 21 EYSRKLRERGMNVTVEIMERGLSAQLKYASAIGA 54 (97)
T ss_dssp HHHHHHHTTTCEEEECCSCCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCEEEEECCCCcHHHHHHHHHhcCC
Confidence 3334444458888887888888877766554444
No 242
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}
Probab=20.77 E-value=1.7e+02 Score=24.28 Aligned_cols=77 Identities=10% Similarity=0.092 Sum_probs=45.5
Q ss_pred CcEEEEE-eccHHHHHHHHHHHHhcccCCcEEEEEecCCCHHHHHHHHh------cCCCcEEEEChHHHHHHHHcCCCCC
Q 011963 256 GPFLLFL-VSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLR------SCEPEFLVSTPERLLKLVSLKAIDV 328 (474)
Q Consensus 256 ~~~alil-~PtreLa~Qi~~~~~~l~~~~i~v~~~~gg~~~~~q~~~l~------~~~~~IlV~TP~rL~~ll~~~~~~l 328 (474)
|-.+++. ....+.+.++.+.++.. +.++..+..+.....+...+- -+++||||...|.. ..
T Consensus 25 Ga~V~i~~~~~~~~~~~~~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~---------~~ 92 (244)
T d1edoa_ 25 GCKVLVNYARSAKAAEEVSKQIEAY---GGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGIT---------RD 92 (244)
T ss_dssp TCEEEEEESSCHHHHHHHHHHHHHH---TCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCC---------CC
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHc---CCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccc---------cc
Confidence 5566554 56777888787777765 456666667766554444331 24799999765421 12
Q ss_pred CCcceEEeccccccCC
Q 011963 329 SGVSLLVVDRLDSLSK 344 (474)
Q Consensus 329 ~~l~~lViDEad~ll~ 344 (474)
..+.-+=.|+.+++++
T Consensus 93 ~~~~~~~~~~~~~~~~ 108 (244)
T d1edoa_ 93 TLLIRMKKSQWDEVID 108 (244)
T ss_dssp CCGGGCCHHHHHHHHH
T ss_pred cchhccchHHHHHHHh
Confidence 2222233566677766
No 243
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=20.73 E-value=30 Score=28.67 Aligned_cols=13 Identities=0% Similarity=-0.087 Sum_probs=10.6
Q ss_pred EEEEcCCCcchhHH
Q 011963 220 ILETSGSSSTIVQI 233 (474)
Q Consensus 220 vl~~A~TG~SGKTl 233 (474)
+++..+.| ||||.
T Consensus 3 i~v~G~~G-sGKTT 15 (244)
T d1yrba1 3 VVFVGTAG-SGKTT 15 (244)
T ss_dssp EEEECSTT-SSHHH
T ss_pred EEEEcCCC-CcHHH
Confidence 56778999 99994
No 244
>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}
Probab=20.69 E-value=2.5e+02 Score=24.16 Aligned_cols=77 Identities=9% Similarity=0.097 Sum_probs=40.4
Q ss_pred CcEEEEEeccHHHHHHHHHHHHhcccCCcEEEEEe----cC---CCHHHHHHHHhcCCCcEE-EEChH------------
Q 011963 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLH----PG---AAIDHQITGLRSCEPEFL-VSTPE------------ 315 (474)
Q Consensus 256 ~~~alil~PtreLa~Qi~~~~~~l~~~~i~v~~~~----gg---~~~~~q~~~l~~~~~~Il-V~TP~------------ 315 (474)
+-.++|..|+--....+ +.. .|..++.+. ++ .+.+.....+....+.++ +++|.
T Consensus 82 gd~Vlv~~P~y~~~~~~---~~~---~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~ 155 (361)
T d1d2fa_ 82 GEGVVIHTPAYDAFYKA---IEG---NQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDEL 155 (361)
T ss_dssp TCEEEEEESCCHHHHHH---HHH---TTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHH
T ss_pred ccccccccccccchhHH---HHh---hcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhhh
Confidence 55788889976443222 222 244433322 11 356666666654344444 44442
Q ss_pred -HHHHHHHcCCCCCCCcceEEeccccccCC
Q 011963 316 -RLLKLVSLKAIDVSGVSLLVVDRLDSLSK 344 (474)
Q Consensus 316 -rL~~ll~~~~~~l~~l~~lViDEad~ll~ 344 (474)
.|.++.....+ +||+||++..+.
T Consensus 156 ~~i~~~~~~~~~------~lI~De~y~~~~ 179 (361)
T d1d2fa_ 156 EIMADLCERHGV------RVISDEIHMDMV 179 (361)
T ss_dssp HHHHHHHHHTTC------EEEEECTTTTCB
T ss_pred hhhhhhhhhhhe------eeeecccccccc
Confidence 34444444433 688999987653
No 245
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=20.58 E-value=22 Score=28.24 Aligned_cols=17 Identities=6% Similarity=-0.042 Sum_probs=13.6
Q ss_pred CcEEEEcCCCcchhHHHH
Q 011963 218 KDILETSGSSSTIVQIAW 235 (474)
Q Consensus 218 ~dvl~~A~TG~SGKTlaf 235 (474)
+.+++..+.| ||||...
T Consensus 3 ~~Iil~G~~G-sGKSTia 19 (170)
T d1e6ca_ 3 EPIFMVGARG-CGMTTVG 19 (170)
T ss_dssp CCEEEESCTT-SSHHHHH
T ss_pred CCEEEECCCC-CCHHHHH
Confidence 5678899999 9997543
No 246
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=20.44 E-value=17 Score=29.48 Aligned_cols=13 Identities=8% Similarity=0.089 Sum_probs=11.3
Q ss_pred EEEEcCCCcchhHH
Q 011963 220 ILETSGSSSTIVQI 233 (474)
Q Consensus 220 vl~~A~TG~SGKTl 233 (474)
+++..|.| ||||.
T Consensus 9 I~i~G~pG-SGKsT 21 (194)
T d1qf9a_ 9 VFVLGGPG-SGKGT 21 (194)
T ss_dssp EEEEESTT-SSHHH
T ss_pred EEEECCCC-CCHHH
Confidence 57789999 99986
No 247
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=20.37 E-value=18 Score=29.04 Aligned_cols=14 Identities=7% Similarity=-0.102 Sum_probs=11.9
Q ss_pred EEEEcCCCcchhHHH
Q 011963 220 ILETSGSSSTIVQIA 234 (474)
Q Consensus 220 vl~~A~TG~SGKTla 234 (474)
+++..|.| ||||..
T Consensus 3 I~i~G~pG-SGKsT~ 16 (179)
T d1e4va1 3 IILLGAPV-AGKGTQ 16 (179)
T ss_dssp EEEEESTT-SSHHHH
T ss_pred EEEECCCC-CCHHHH
Confidence 67889999 999864
No 248
>d1guda_ c.93.1.1 (A:) D-allose-binding protein {Escherichia coli [TaxId: 562]}
Probab=20.29 E-value=1.3e+02 Score=25.01 Aligned_cols=37 Identities=11% Similarity=0.125 Sum_probs=27.9
Q ss_pred HHHHHHhhccCCCCCCcEEEEEccchhHHHHHHHHhhCCCc
Q 011963 419 QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYS 459 (474)
Q Consensus 419 ~lL~~ll~~~~~~~~~k~LVF~~s~~~a~~l~~~L~~~gi~ 459 (474)
..+..++..+ +....|||.+...+..+...|+..|++
T Consensus 182 ~~~~~l~~~~----~~~~ai~~~~d~~a~g~~~al~~~g~~ 218 (288)
T d1guda_ 182 DVATNVLQRN----PNIKAIYCANDTMAMGVAQAVANAGKT 218 (288)
T ss_dssp HHHHHHHHHC----TTCCEEEESSHHHHHHHHHHHHHTTCT
T ss_pred HHHHHhhccC----cccceeeccCCHHHHHHHHHHHHcCCC
Confidence 3444454444 356688999999999999999999974
No 249
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}
Probab=20.27 E-value=86 Score=24.21 Aligned_cols=80 Identities=14% Similarity=0.138 Sum_probs=44.5
Q ss_pred HHHHHhcCCCcEEEEC--hHHHHHHHHc-CCCCCCCcceEEeccccccCC---hhHHHHHHhhCCCCCcEEEEEccCCcc
Q 011963 298 QITGLRSCEPEFLVST--PERLLKLVSL-KAIDVSGVSLLVVDRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLTYT 371 (474)
Q Consensus 298 q~~~l~~~~~~IlV~T--P~rL~~ll~~-~~~~l~~l~~lViDEad~ll~---~~~l~~Il~~l~~~~q~llfSAT~~~~ 371 (474)
....|.+.+.+|.|+. ++++.++... +..-..+.+-+ +|.+|.++= ...+..++..+..+.-++-+.|+++
T Consensus 15 l~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~-~~~~dvIilavkp~~~~~vl~~l~~~~~iis~~agi~-- 91 (152)
T d2ahra2 15 IIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDL-IDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGIS-- 91 (152)
T ss_dssp HHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHH-HHTCSEEEECSCGGGHHHHHTTSCCCSCEEECCTTCC--
T ss_pred HHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhh-hhccceeeeecchHhHHHHhhhcccceeEeccccccc--
Confidence 3444555467888884 6777776554 32222222222 566776654 7788888888865543443444444
Q ss_pred HHHHHHHhhc
Q 011963 372 SVPAVQNLLL 381 (474)
Q Consensus 372 v~~l~~~~l~ 381 (474)
...+. .++.
T Consensus 92 ~~~l~-~~l~ 100 (152)
T d2ahra2 92 LQRLA-TFVG 100 (152)
T ss_dssp HHHHH-HHHC
T ss_pred HHHHH-hhhc
Confidence 44443 4444
No 250
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.23 E-value=18 Score=28.81 Aligned_cols=14 Identities=0% Similarity=-0.220 Sum_probs=12.1
Q ss_pred EEEEcCCCcchhHHH
Q 011963 220 ILETSGSSSTIVQIA 234 (474)
Q Consensus 220 vl~~A~TG~SGKTla 234 (474)
+++..|.| ||||..
T Consensus 3 I~i~G~pG-SGKsT~ 16 (182)
T d1zina1 3 LVLMGLPG-AGKGTQ 16 (182)
T ss_dssp EEEECSTT-SSHHHH
T ss_pred EEEECCCC-CCHHHH
Confidence 78899999 999863
No 251
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=20.16 E-value=21 Score=28.92 Aligned_cols=17 Identities=0% Similarity=-0.240 Sum_probs=13.6
Q ss_pred CCcEEEEcCCCcchhHHH
Q 011963 217 AKDILETSGSSSTIVQIA 234 (474)
Q Consensus 217 g~dvl~~A~TG~SGKTla 234 (474)
|--+++..|.| ||||..
T Consensus 3 ~~riil~G~pG-SGKsT~ 19 (190)
T d1ak2a1 3 GVRAVLLGPPG-AGKGTQ 19 (190)
T ss_dssp CCEEEEECCTT-SSHHHH
T ss_pred ccEEEEECCCC-CCHHHH
Confidence 44678889999 999853
No 252
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=20.03 E-value=18 Score=29.05 Aligned_cols=13 Identities=8% Similarity=-0.202 Sum_probs=11.6
Q ss_pred EEEEcCCCcchhHH
Q 011963 220 ILETSGSSSTIVQI 233 (474)
Q Consensus 220 vl~~A~TG~SGKTl 233 (474)
+++..|.| ||||.
T Consensus 3 I~i~G~pG-SGKsT 15 (182)
T d1s3ga1 3 IVLMGLPG-AGKGT 15 (182)
T ss_dssp EEEECSTT-SSHHH
T ss_pred EEEECCCC-CCHHH
Confidence 68889999 99985
Done!