Query 011964
Match_columns 474
No_of_seqs 596 out of 3312
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 18:54:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011964.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011964hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.7 3.3E-17 1.1E-21 160.6 12.2 128 220-359 11-139 (257)
2 3hnr_A Probable methyltransfer 99.7 2.8E-15 9.5E-20 140.8 18.2 138 255-397 47-205 (220)
3 1vl5_A Unknown conserved prote 99.7 2.9E-15 9.9E-20 144.9 17.7 145 235-391 27-188 (260)
4 3dh0_A SAM dependent methyltra 99.6 1.8E-15 6E-20 142.1 13.3 135 255-390 39-178 (219)
5 4gek_A TRNA (CMO5U34)-methyltr 99.6 2.6E-15 8.8E-20 147.3 15.0 105 254-360 71-183 (261)
6 3h2b_A SAM-dependent methyltra 99.6 1.4E-15 4.9E-20 141.3 12.1 136 255-393 43-182 (203)
7 3dlc_A Putative S-adenosyl-L-m 99.6 7.3E-15 2.5E-19 136.9 16.6 103 255-360 45-153 (219)
8 2p7i_A Hypothetical protein; p 99.6 8.9E-15 3E-19 138.8 17.1 133 254-391 43-197 (250)
9 3l8d_A Methyltransferase; stru 99.6 9.2E-15 3.2E-19 139.1 16.7 133 254-390 54-197 (242)
10 1pjz_A Thiopurine S-methyltran 99.6 1.3E-15 4.3E-20 143.2 10.4 98 255-355 24-140 (203)
11 1nkv_A Hypothetical protein YJ 99.6 3.6E-15 1.2E-19 143.3 13.2 145 231-389 22-183 (256)
12 3kkz_A Uncharacterized protein 99.6 6.5E-15 2.2E-19 143.1 15.2 130 254-389 47-192 (267)
13 3bus_A REBM, methyltransferase 99.6 8.7E-15 3E-19 142.2 16.0 102 254-358 62-169 (273)
14 3f4k_A Putative methyltransfer 99.6 9.2E-15 3.1E-19 140.6 15.4 130 254-389 47-192 (257)
15 1xtp_A LMAJ004091AAA; SGPP, st 99.6 8.4E-16 2.9E-20 147.4 7.9 135 254-390 94-235 (254)
16 3i9f_A Putative type 11 methyl 99.6 3.5E-15 1.2E-19 134.8 11.5 128 255-391 19-146 (170)
17 3ujc_A Phosphoethanolamine N-m 99.6 9.6E-15 3.3E-19 140.5 14.8 136 254-391 56-204 (266)
18 2o57_A Putative sarcosine dime 99.6 1.5E-14 5.1E-19 142.6 15.9 135 254-391 83-232 (297)
19 1xxl_A YCGJ protein; structura 99.6 4.2E-14 1.4E-18 135.5 18.4 101 255-359 23-128 (239)
20 3g5l_A Putative S-adenosylmeth 99.6 1.4E-14 4.7E-19 139.4 14.5 102 253-357 44-147 (253)
21 3ege_A Putative methyltransfer 99.6 5.4E-15 1.9E-19 143.7 11.7 113 232-358 21-133 (261)
22 3ccf_A Cyclopropane-fatty-acyl 99.6 2.5E-14 8.5E-19 140.0 15.5 100 255-359 59-158 (279)
23 3dtn_A Putative methyltransfer 99.6 4.7E-14 1.6E-18 133.9 15.9 105 253-360 44-153 (234)
24 2gs9_A Hypothetical protein TT 99.6 3.4E-14 1.2E-18 132.7 14.6 101 253-359 36-136 (211)
25 4fsd_A Arsenic methyltransfera 99.6 1.9E-14 6.7E-19 148.2 14.0 136 253-389 83-247 (383)
26 3ou2_A SAM-dependent methyltra 99.6 5E-14 1.7E-18 131.5 15.5 99 255-358 48-149 (218)
27 3dli_A Methyltransferase; PSI- 99.6 1.7E-14 5.9E-19 137.9 12.0 130 254-389 42-180 (240)
28 3sm3_A SAM-dependent methyltra 99.5 1.1E-13 3.7E-18 130.5 16.7 103 254-360 31-146 (235)
29 3vc1_A Geranyl diphosphate 2-C 99.5 5.6E-14 1.9E-18 140.1 15.1 136 253-392 117-268 (312)
30 4htf_A S-adenosylmethionine-de 99.5 3.8E-14 1.3E-18 139.0 13.4 101 254-358 69-176 (285)
31 3mgg_A Methyltransferase; NYSG 99.5 3.6E-14 1.2E-18 138.2 12.8 103 254-358 38-145 (276)
32 2yqz_A Hypothetical protein TT 99.5 4.5E-14 1.5E-18 135.8 13.4 97 254-354 40-140 (263)
33 2avn_A Ubiquinone/menaquinone 99.5 3.4E-14 1.2E-18 137.8 12.5 101 254-358 55-155 (260)
34 3thr_A Glycine N-methyltransfe 99.5 1.9E-14 6.6E-19 141.3 10.8 115 231-357 43-177 (293)
35 3ofk_A Nodulation protein S; N 99.5 5.2E-14 1.8E-18 131.9 13.3 100 254-358 52-157 (216)
36 2p35_A Trans-aconitate 2-methy 99.5 4.5E-14 1.5E-18 135.7 13.0 103 253-358 33-135 (259)
37 3e23_A Uncharacterized protein 99.5 1.5E-14 5.1E-19 135.4 9.1 132 254-390 44-179 (211)
38 3jwg_A HEN1, methyltransferase 99.5 8.2E-14 2.8E-18 131.0 14.2 100 254-355 30-141 (219)
39 2gb4_A Thiopurine S-methyltran 99.5 3.7E-14 1.3E-18 138.4 12.2 99 254-355 69-191 (252)
40 3lcc_A Putative methyl chlorid 99.5 9.6E-14 3.3E-18 132.1 14.6 130 255-390 68-204 (235)
41 3bkw_A MLL3908 protein, S-aden 99.5 6.4E-14 2.2E-18 133.1 13.4 101 254-357 44-146 (243)
42 2ex4_A Adrenal gland protein A 99.5 3.7E-14 1.3E-18 135.7 11.3 134 254-390 80-222 (241)
43 3pfg_A N-methyltransferase; N, 99.5 7.9E-14 2.7E-18 135.0 13.6 99 254-356 51-152 (263)
44 3jwh_A HEN1; methyltransferase 99.5 7.2E-14 2.5E-18 131.4 12.8 100 255-356 31-142 (217)
45 4e2x_A TCAB9; kijanose, tetron 99.5 1.1E-14 3.9E-19 150.9 7.3 133 254-390 108-250 (416)
46 1ve3_A Hypothetical protein PH 99.5 1.1E-13 3.7E-18 130.2 13.2 101 254-357 39-144 (227)
47 2p8j_A S-adenosylmethionine-de 99.5 1.1E-13 3.9E-18 128.6 13.2 102 254-358 24-131 (209)
48 3g5t_A Trans-aconitate 3-methy 99.5 4.3E-14 1.5E-18 139.9 10.3 100 254-355 37-149 (299)
49 1vlm_A SAM-dependent methyltra 99.5 4.1E-13 1.4E-17 126.7 16.3 126 254-389 48-184 (219)
50 3gu3_A Methyltransferase; alph 99.5 1.2E-13 3.9E-18 136.1 13.0 102 254-357 23-128 (284)
51 1kpg_A CFA synthase;, cyclopro 99.5 1.4E-13 4.7E-18 134.9 13.5 102 254-360 65-173 (287)
52 2aot_A HMT, histamine N-methyl 99.5 3.4E-14 1.1E-18 140.4 8.7 104 253-358 52-175 (292)
53 2xvm_A Tellurite resistance pr 99.5 2.2E-13 7.4E-18 125.3 13.2 99 255-357 34-138 (199)
54 3cgg_A SAM-dependent methyltra 99.5 4.4E-13 1.5E-17 122.3 14.8 124 254-390 47-172 (195)
55 3e8s_A Putative SAM dependent 99.5 1.4E-13 4.9E-18 128.7 11.8 99 255-359 54-156 (227)
56 2kw5_A SLR1183 protein; struct 99.5 2.9E-13 9.9E-18 125.5 13.5 100 256-360 32-136 (202)
57 2pxx_A Uncharacterized protein 99.5 1.8E-13 6.3E-18 127.1 12.0 103 254-358 43-162 (215)
58 1y8c_A S-adenosylmethionine-de 99.5 2.7E-13 9.4E-18 128.6 13.4 117 231-357 21-144 (246)
59 3orh_A Guanidinoacetate N-meth 99.5 8.4E-14 2.9E-18 134.0 9.8 99 254-355 61-170 (236)
60 3hem_A Cyclopropane-fatty-acyl 99.5 3.3E-13 1.1E-17 133.7 14.1 101 254-360 73-188 (302)
61 3ocj_A Putative exported prote 99.5 2.7E-13 9.2E-18 134.8 13.4 103 254-358 119-230 (305)
62 1zx0_A Guanidinoacetate N-meth 99.5 7.9E-14 2.7E-18 133.3 8.8 101 254-356 61-171 (236)
63 3bxo_A N,N-dimethyltransferase 99.5 3E-13 1E-17 128.1 12.5 101 254-358 41-144 (239)
64 3cc8_A Putative methyltransfer 99.5 5.8E-13 2E-17 124.8 14.2 100 254-359 33-134 (230)
65 3mti_A RRNA methylase; SAM-dep 99.5 4.3E-13 1.5E-17 122.8 12.8 102 254-358 23-138 (185)
66 3m70_A Tellurite resistance pr 99.4 7.2E-13 2.5E-17 129.9 14.3 99 255-357 122-225 (286)
67 1dus_A MJ0882; hypothetical pr 99.4 3.1E-12 1E-16 116.5 17.2 130 217-358 22-160 (194)
68 2vdw_A Vaccinia virus capping 99.4 1.9E-13 6.5E-18 136.8 9.9 102 254-357 49-171 (302)
69 3g2m_A PCZA361.24; SAM-depende 99.4 3.5E-13 1.2E-17 133.3 11.6 102 255-360 84-195 (299)
70 2a14_A Indolethylamine N-methy 99.4 1E-13 3.5E-18 135.1 7.2 135 253-389 55-234 (263)
71 3bkx_A SAM-dependent methyltra 99.4 1E-12 3.6E-17 127.5 13.8 104 255-359 45-163 (275)
72 3e05_A Precorrin-6Y C5,15-meth 99.4 4.4E-12 1.5E-16 118.1 17.1 118 255-389 42-164 (204)
73 2g72_A Phenylethanolamine N-me 99.4 3.4E-13 1.2E-17 132.8 9.8 135 254-390 72-253 (289)
74 3d2l_A SAM-dependent methyltra 99.4 8E-13 2.8E-17 125.5 12.0 98 255-357 35-139 (243)
75 3p9n_A Possible methyltransfer 99.4 1.1E-12 3.6E-17 121.0 12.3 123 230-359 26-157 (189)
76 2fk8_A Methoxy mycolic acid sy 99.4 9.3E-13 3.2E-17 131.2 12.5 101 254-360 91-199 (318)
77 1wzn_A SAM-dependent methyltra 99.4 1.5E-12 5.2E-17 124.7 13.5 100 254-357 42-147 (252)
78 1ri5_A MRNA capping enzyme; me 99.4 8.2E-13 2.8E-17 129.3 11.1 102 254-357 65-176 (298)
79 3m33_A Uncharacterized protein 99.4 2E-12 7E-17 122.7 13.0 115 254-391 49-165 (226)
80 2i62_A Nicotinamide N-methyltr 99.4 6.8E-13 2.3E-17 127.7 9.5 136 253-390 56-236 (265)
81 3hm2_A Precorrin-6Y C5,15-meth 99.4 3.3E-12 1.1E-16 115.4 13.5 96 255-357 27-129 (178)
82 3iv6_A Putative Zn-dependent a 99.4 1.2E-12 4.2E-17 128.5 11.3 113 232-357 32-150 (261)
83 2yxd_A Probable cobalt-precorr 99.4 6.2E-12 2.1E-16 113.6 14.8 140 231-401 21-165 (183)
84 1p91_A Ribosomal RNA large sub 99.4 1.1E-12 3.8E-17 127.2 10.5 97 254-359 86-182 (269)
85 3bgv_A MRNA CAP guanine-N7 met 99.4 1.2E-12 4.1E-17 130.4 10.8 101 254-357 35-157 (313)
86 1yzh_A TRNA (guanine-N(7)-)-me 99.4 3.8E-12 1.3E-16 119.7 13.5 122 254-389 42-178 (214)
87 3g07_A 7SK snRNA methylphospha 99.4 1.1E-12 3.7E-17 130.1 9.8 104 254-358 47-223 (292)
88 3ggd_A SAM-dependent methyltra 99.4 7.3E-13 2.5E-17 126.6 8.2 103 254-359 57-167 (245)
89 3njr_A Precorrin-6Y methylase; 99.4 7.8E-12 2.7E-16 117.5 15.1 114 255-389 57-176 (204)
90 2fca_A TRNA (guanine-N(7)-)-me 99.4 3.6E-12 1.2E-16 120.6 12.6 100 255-356 40-154 (213)
91 1l3i_A Precorrin-6Y methyltran 99.4 6.6E-12 2.3E-16 114.1 13.9 129 232-388 20-155 (192)
92 3grz_A L11 mtase, ribosomal pr 99.4 4.4E-12 1.5E-16 118.0 12.7 116 254-389 61-181 (205)
93 2zfu_A Nucleomethylin, cerebra 99.4 1.5E-12 5.2E-17 122.0 9.5 109 254-390 68-176 (215)
94 3fpf_A Mtnas, putative unchara 99.4 3.2E-12 1.1E-16 127.6 12.3 97 253-356 122-223 (298)
95 3q87_B N6 adenine specific DNA 99.4 7.8E-12 2.7E-16 114.0 13.9 114 255-390 25-146 (170)
96 1xdz_A Methyltransferase GIDB; 99.3 5E-12 1.7E-16 121.3 12.9 121 253-389 70-198 (240)
97 3htx_A HEN1; HEN1, small RNA m 99.3 5.1E-12 1.7E-16 140.0 14.3 103 254-358 722-837 (950)
98 3eey_A Putative rRNA methylase 99.3 5.4E-12 1.9E-16 116.6 11.6 104 255-358 24-142 (197)
99 4df3_A Fibrillarin-like rRNA/T 99.3 7.8E-12 2.7E-16 120.8 12.8 132 253-390 77-214 (233)
100 3mq2_A 16S rRNA methyltransfer 99.3 5.4E-12 1.8E-16 118.6 11.4 133 255-389 29-180 (218)
101 3dxy_A TRNA (guanine-N(7)-)-me 99.3 2.3E-12 8E-17 122.7 8.7 101 254-356 35-151 (218)
102 1nt2_A Fibrillarin-like PRE-rR 99.3 7.9E-12 2.7E-16 118.3 12.2 98 253-356 57-162 (210)
103 2ift_A Putative methylase HI07 99.3 4.8E-12 1.6E-16 118.5 10.4 100 255-358 55-166 (201)
104 3dmg_A Probable ribosomal RNA 99.3 4.7E-12 1.6E-16 130.8 11.2 102 254-358 234-343 (381)
105 2r3s_A Uncharacterized protein 99.3 2.1E-11 7.2E-16 122.0 15.6 104 254-360 166-276 (335)
106 3dp7_A SAM-dependent methyltra 99.3 1.4E-11 4.6E-16 125.9 14.2 105 253-360 179-292 (363)
107 3uwp_A Histone-lysine N-methyl 99.3 3.2E-12 1.1E-16 132.6 9.3 120 230-360 158-293 (438)
108 3evz_A Methyltransferase; NYSG 99.3 2.4E-11 8.4E-16 114.9 14.4 123 254-389 56-202 (230)
109 3ckk_A TRNA (guanine-N(7)-)-me 99.3 6.8E-12 2.3E-16 120.9 10.4 101 254-356 47-169 (235)
110 3q7e_A Protein arginine N-meth 99.3 7.6E-12 2.6E-16 127.4 11.1 98 254-354 67-172 (349)
111 3hp7_A Hemolysin, putative; st 99.3 1.7E-11 5.9E-16 122.1 13.1 130 254-389 86-228 (291)
112 3i53_A O-methyltransferase; CO 99.3 3.7E-11 1.3E-15 120.7 15.6 133 253-389 169-317 (332)
113 2qe6_A Uncharacterized protein 99.3 1.6E-11 5.4E-16 121.0 12.3 104 254-358 78-199 (274)
114 3g89_A Ribosomal RNA small sub 99.3 1.6E-11 5.4E-16 119.4 12.1 121 253-389 80-208 (249)
115 2fyt_A Protein arginine N-meth 99.3 9.5E-12 3.3E-16 126.3 10.9 96 254-352 65-168 (340)
116 3lbf_A Protein-L-isoaspartate 99.3 1.7E-11 5.8E-16 114.4 11.6 107 233-357 65-176 (210)
117 3gwz_A MMCR; methyltransferase 99.3 6.1E-11 2.1E-15 121.3 16.7 104 253-360 202-312 (369)
118 2fpo_A Methylase YHHF; structu 99.3 1.8E-11 6.1E-16 114.7 11.4 99 255-357 56-162 (202)
119 4dzr_A Protein-(glutamine-N5) 99.3 3.2E-12 1.1E-16 118.5 6.1 102 254-357 31-166 (215)
120 1vbf_A 231AA long hypothetical 99.3 1.8E-11 6.2E-16 115.9 11.4 109 232-358 57-168 (231)
121 2esr_A Methyltransferase; stru 99.3 9.8E-12 3.3E-16 112.9 8.9 102 254-359 32-142 (177)
122 1qzz_A RDMB, aclacinomycin-10- 99.3 5.7E-11 1.9E-15 120.9 15.4 99 254-356 183-288 (374)
123 2fhp_A Methylase, putative; al 99.3 1.8E-11 6.3E-16 111.4 10.5 121 228-359 26-158 (187)
124 3lpm_A Putative methyltransfer 99.3 5E-11 1.7E-15 115.6 13.9 120 255-389 51-197 (259)
125 2pwy_A TRNA (adenine-N(1)-)-me 99.3 3.1E-11 1.1E-15 115.8 12.2 116 255-389 98-220 (258)
126 3fzg_A 16S rRNA methylase; met 99.2 6.3E-12 2.1E-16 117.7 6.7 99 254-355 50-152 (200)
127 3opn_A Putative hemolysin; str 99.2 5.4E-12 1.8E-16 121.6 6.2 125 254-389 38-180 (232)
128 3r0q_C Probable protein argini 99.2 1.4E-11 4.9E-16 126.7 9.8 99 254-356 64-170 (376)
129 1fbn_A MJ fibrillarin homologu 99.2 6E-11 2E-15 113.0 13.4 94 253-354 74-177 (230)
130 1ws6_A Methyltransferase; stru 99.2 1.3E-11 4.3E-16 110.7 8.1 118 230-359 24-151 (171)
131 1jsx_A Glucose-inhibited divis 99.2 4.1E-11 1.4E-15 111.3 11.8 96 254-356 66-166 (207)
132 2frn_A Hypothetical protein PH 99.2 4.6E-11 1.6E-15 117.7 12.8 122 254-389 126-253 (278)
133 3p2e_A 16S rRNA methylase; met 99.2 1.6E-11 5.6E-16 117.4 9.1 136 254-390 25-182 (225)
134 1af7_A Chemotaxis receptor met 99.2 5.7E-11 2E-15 117.4 12.8 101 254-354 106-251 (274)
135 1tw3_A COMT, carminomycin 4-O- 99.2 1.1E-10 3.6E-15 118.4 14.9 100 254-357 184-290 (360)
136 1g6q_1 HnRNP arginine N-methyl 99.2 5E-11 1.7E-15 120.3 12.1 112 231-353 24-143 (328)
137 1yb2_A Hypothetical protein TA 99.2 3.6E-11 1.2E-15 117.8 10.6 117 254-389 111-233 (275)
138 3mcz_A O-methyltransferase; ad 99.2 7.1E-11 2.4E-15 119.3 13.0 134 254-389 180-335 (352)
139 2ip2_A Probable phenazine-spec 99.2 7E-11 2.4E-15 118.5 12.7 101 255-359 169-276 (334)
140 4dcm_A Ribosomal RNA large sub 99.2 2.3E-11 8E-16 125.2 9.4 101 255-357 224-336 (375)
141 2pjd_A Ribosomal RNA small sub 99.2 1.7E-11 5.9E-16 124.3 8.2 117 231-358 182-306 (343)
142 1i9g_A Hypothetical protein RV 99.2 5E-11 1.7E-15 116.2 11.1 97 255-357 101-205 (280)
143 3sso_A Methyltransferase; macr 99.2 5.7E-12 2E-16 130.3 4.6 99 253-357 216-326 (419)
144 3mb5_A SAM-dependent methyltra 99.2 5.8E-11 2E-15 114.2 11.3 95 255-357 95-196 (255)
145 3lst_A CALO1 methyltransferase 99.2 1.5E-10 5.1E-15 117.3 14.9 131 254-389 185-332 (348)
146 2nxc_A L11 mtase, ribosomal pr 99.2 4.7E-11 1.6E-15 116.0 10.7 116 254-389 121-240 (254)
147 1dl5_A Protein-L-isoaspartate 99.2 5.1E-11 1.7E-15 119.4 11.1 111 232-357 62-177 (317)
148 1x19_A CRTF-related protein; m 99.2 7.4E-11 2.5E-15 119.8 12.4 102 254-359 191-299 (359)
149 1ej0_A FTSJ; methyltransferase 99.2 4E-11 1.4E-15 106.9 9.1 98 254-358 23-139 (180)
150 2yxe_A Protein-L-isoaspartate 99.2 6.5E-11 2.2E-15 110.8 10.6 96 255-357 79-179 (215)
151 3u81_A Catechol O-methyltransf 99.2 5.9E-11 2E-15 112.2 10.3 103 254-358 59-173 (221)
152 2ozv_A Hypothetical protein AT 99.2 8.3E-11 2.8E-15 114.7 11.3 102 254-356 37-171 (260)
153 3ntv_A MW1564 protein; rossman 99.2 1.8E-10 6.1E-15 110.0 13.4 100 254-358 72-179 (232)
154 3tfw_A Putative O-methyltransf 99.2 4.7E-10 1.6E-14 108.4 16.5 102 254-359 64-174 (248)
155 3gdh_A Trimethylguanosine synt 99.2 3.8E-12 1.3E-16 121.4 1.5 96 254-354 79-180 (241)
156 3id6_C Fibrillarin-like rRNA/T 99.2 1.2E-10 4.1E-15 112.5 11.9 99 253-356 76-182 (232)
157 2y1w_A Histone-arginine methyl 99.2 5.9E-11 2E-15 120.7 10.3 113 231-355 36-155 (348)
158 2bm8_A Cephalosporin hydroxyla 99.2 2.6E-11 8.9E-16 116.8 7.3 98 255-356 83-188 (236)
159 2ld4_A Anamorsin; methyltransf 99.2 1.8E-11 6.2E-16 111.3 5.5 113 253-385 12-128 (176)
160 2ipx_A RRNA 2'-O-methyltransfe 99.2 7.3E-11 2.5E-15 112.4 9.7 99 254-356 78-183 (233)
161 3bwc_A Spermidine synthase; SA 99.2 1.9E-10 6.6E-15 114.9 13.0 127 253-389 95-236 (304)
162 1i1n_A Protein-L-isoaspartate 99.2 1.5E-10 5.2E-15 109.2 11.6 98 254-358 78-185 (226)
163 1fp1_D Isoliquiritigenin 2'-O- 99.2 5.2E-11 1.8E-15 121.8 9.0 99 253-358 209-309 (372)
164 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.1E-10 3.6E-15 112.5 10.7 101 254-356 50-174 (246)
165 2b3t_A Protein methyltransfera 99.1 2.6E-10 8.9E-15 111.6 13.3 119 254-387 110-257 (276)
166 3reo_A (ISO)eugenol O-methyltr 99.1 1.4E-10 4.9E-15 118.7 11.6 101 253-359 203-304 (368)
167 1ixk_A Methyltransferase; open 99.1 3.6E-10 1.2E-14 113.4 14.3 125 255-388 120-270 (315)
168 3dr5_A Putative O-methyltransf 99.1 9.3E-11 3.2E-15 111.8 9.3 100 255-358 58-166 (221)
169 1o54_A SAM-dependent O-methylt 99.1 2.4E-10 8E-15 111.9 12.3 116 255-389 114-235 (277)
170 3p9c_A Caffeic acid O-methyltr 99.1 2E-10 6.9E-15 117.4 12.2 101 253-359 201-302 (364)
171 2pbf_A Protein-L-isoaspartate 99.1 1.6E-10 5.4E-15 109.2 10.6 97 254-357 81-195 (227)
172 1fp2_A Isoflavone O-methyltran 99.1 7.9E-11 2.7E-15 119.4 8.9 100 253-359 188-292 (352)
173 3duw_A OMT, O-methyltransferas 99.1 2.1E-10 7.1E-15 108.1 10.7 102 254-359 59-171 (223)
174 1g8a_A Fibrillarin-like PRE-rR 99.1 4.3E-10 1.5E-14 106.3 12.7 98 254-355 74-178 (227)
175 1u2z_A Histone-lysine N-methyl 99.1 1.4E-10 4.8E-15 121.5 10.1 117 231-358 228-362 (433)
176 2gpy_A O-methyltransferase; st 99.1 2.1E-10 7.2E-15 109.0 10.5 99 255-358 56-163 (233)
177 3c3p_A Methyltransferase; NP_9 99.1 2.3E-10 7.8E-15 107.0 10.6 100 254-358 57-163 (210)
178 1jg1_A PIMT;, protein-L-isoasp 99.1 2.4E-10 8.1E-15 109.1 10.5 108 233-358 79-192 (235)
179 2yvl_A TRMI protein, hypotheti 99.1 3.7E-10 1.3E-14 107.6 11.7 94 255-357 93-192 (248)
180 1o9g_A RRNA methyltransferase; 99.1 2.6E-10 8.8E-15 109.8 10.6 104 254-357 52-216 (250)
181 2plw_A Ribosomal RNA methyltra 99.1 2.2E-10 7.4E-15 105.9 9.4 96 255-357 24-156 (201)
182 3tr6_A O-methyltransferase; ce 99.1 1.7E-10 5.7E-15 108.7 8.7 102 254-359 65-178 (225)
183 3bzb_A Uncharacterized protein 99.1 5.3E-10 1.8E-14 110.2 12.2 99 254-355 80-205 (281)
184 3adn_A Spermidine synthase; am 99.1 8E-10 2.7E-14 110.2 13.5 102 253-356 83-199 (294)
185 3tma_A Methyltransferase; thum 99.1 4.1E-10 1.4E-14 114.4 11.6 102 255-356 205-318 (354)
186 3giw_A Protein of unknown func 99.1 1.7E-10 6E-15 113.8 8.4 106 253-359 78-204 (277)
187 2b25_A Hypothetical protein; s 99.1 3E-10 1E-14 114.4 10.1 96 255-356 107-220 (336)
188 1r18_A Protein-L-isoaspartate( 99.1 4.5E-10 1.6E-14 106.4 10.7 96 254-357 85-196 (227)
189 2igt_A SAM dependent methyltra 99.1 8E-10 2.7E-14 112.0 12.6 125 255-388 155-299 (332)
190 4a6d_A Hydroxyindole O-methylt 99.1 2.8E-09 9.6E-14 108.5 16.6 133 253-389 179-330 (353)
191 4azs_A Methyltransferase WBDD; 99.1 1.6E-10 5.4E-15 125.1 7.6 101 254-358 67-176 (569)
192 1xj5_A Spermidine synthase 1; 99.1 1.7E-09 5.7E-14 109.8 14.6 101 253-355 120-235 (334)
193 3b3j_A Histone-arginine methyl 99.0 3.7E-10 1.3E-14 120.0 9.2 97 254-354 159-262 (480)
194 2hnk_A SAM-dependent O-methylt 99.0 1.9E-09 6.5E-14 103.0 13.3 100 255-358 62-184 (239)
195 2wa2_A Non-structural protein 99.0 1.1E-10 3.7E-15 115.5 4.6 96 254-357 83-195 (276)
196 1ne2_A Hypothetical protein TA 99.0 1.8E-09 6.2E-14 100.0 12.7 94 254-354 52-146 (200)
197 2oxt_A Nucleoside-2'-O-methylt 99.0 1.4E-10 4.7E-15 114.0 5.2 96 254-357 75-187 (265)
198 1sui_A Caffeoyl-COA O-methyltr 99.0 7.3E-10 2.5E-14 107.3 10.1 101 254-358 80-193 (247)
199 3cbg_A O-methyltransferase; cy 99.0 2.2E-09 7.5E-14 102.5 13.3 102 254-359 73-186 (232)
200 3a27_A TYW2, uncharacterized p 99.0 3.4E-09 1.2E-13 104.0 14.5 98 254-358 120-222 (272)
201 3r3h_A O-methyltransferase, SA 99.0 1.2E-10 4.1E-15 112.5 4.0 102 254-359 61-174 (242)
202 3gjy_A Spermidine synthase; AP 99.0 9.7E-10 3.3E-14 110.7 10.6 100 255-356 91-201 (317)
203 1zg3_A Isoflavanone 4'-O-methy 99.0 4.5E-10 1.5E-14 114.1 8.0 99 254-359 194-297 (358)
204 2yxl_A PH0851 protein, 450AA l 99.0 4E-09 1.4E-13 110.9 15.4 106 255-360 261-394 (450)
205 4hc4_A Protein arginine N-meth 99.0 1E-09 3.6E-14 113.0 10.4 95 255-353 85-187 (376)
206 2b2c_A Spermidine synthase; be 99.0 2.1E-09 7.3E-14 108.1 12.3 100 254-355 109-222 (314)
207 1uir_A Polyamine aminopropyltr 99.0 1.1E-09 3.8E-14 109.9 9.9 101 253-355 77-195 (314)
208 1inl_A Spermidine synthase; be 99.0 3E-09 1E-13 105.9 13.0 101 254-356 91-206 (296)
209 3ajd_A Putative methyltransfer 99.0 1.1E-09 3.7E-14 107.5 9.5 106 255-360 85-216 (274)
210 2pt6_A Spermidine synthase; tr 99.0 2.5E-09 8.5E-14 107.8 12.0 102 254-357 117-232 (321)
211 2i7c_A Spermidine synthase; tr 99.0 3.2E-09 1.1E-13 105.0 12.6 103 253-357 78-194 (283)
212 2o07_A Spermidine synthase; st 99.0 1.3E-09 4.5E-14 109.0 9.9 102 253-356 95-210 (304)
213 2avd_A Catechol-O-methyltransf 99.0 3.3E-09 1.1E-13 100.1 11.9 101 254-358 70-182 (229)
214 1iy9_A Spermidine synthase; ro 99.0 3.7E-09 1.3E-13 104.1 12.7 102 253-356 75-190 (275)
215 2h00_A Methyltransferase 10 do 99.0 1.8E-10 6.3E-15 110.9 3.1 101 254-355 66-192 (254)
216 2qm3_A Predicted methyltransfe 99.0 9.3E-09 3.2E-13 105.4 16.0 123 254-388 173-304 (373)
217 3c3y_A Pfomt, O-methyltransfer 99.0 3.7E-09 1.3E-13 101.4 12.1 101 254-358 71-184 (237)
218 1wy7_A Hypothetical protein PH 99.0 2.3E-08 7.7E-13 92.8 17.0 117 254-389 50-171 (207)
219 2nyu_A Putative ribosomal RNA 99.0 7.6E-10 2.6E-14 101.6 6.9 98 254-357 23-147 (196)
220 3lec_A NADB-rossmann superfami 98.9 6.8E-09 2.3E-13 99.9 12.7 119 255-391 23-147 (230)
221 3tm4_A TRNA (guanine N2-)-meth 98.9 9.4E-09 3.2E-13 105.5 14.5 118 254-389 218-348 (373)
222 1mjf_A Spermidine synthase; sp 98.9 4.7E-09 1.6E-13 103.6 11.4 99 254-356 76-194 (281)
223 2cmg_A Spermidine synthase; tr 98.9 4E-09 1.4E-13 103.4 10.7 92 253-356 72-172 (262)
224 1nv8_A HEMK protein; class I a 98.9 6.5E-09 2.2E-13 102.8 12.1 98 255-356 125-250 (284)
225 3m6w_A RRNA methylase; rRNA me 98.9 3.1E-09 1.1E-13 112.3 10.3 106 255-360 103-234 (464)
226 1zq9_A Probable dimethyladenos 98.9 2E-09 6.8E-14 106.5 8.2 107 232-352 15-144 (285)
227 3gnl_A Uncharacterized protein 98.9 9.4E-09 3.2E-13 99.8 12.7 119 255-391 23-147 (244)
228 2p41_A Type II methyltransfera 98.9 7.3E-10 2.5E-14 111.0 4.4 99 254-358 83-194 (305)
229 1sqg_A SUN protein, FMU protei 98.9 5.5E-09 1.9E-13 109.1 11.1 105 255-360 248-379 (429)
230 3dou_A Ribosomal RNA large sub 98.9 3.8E-09 1.3E-13 98.4 8.2 95 254-357 26-141 (191)
231 2frx_A Hypothetical protein YE 98.9 1.1E-08 3.6E-13 108.7 12.2 106 255-360 119-251 (479)
232 3k6r_A Putative transferase PH 98.8 1.8E-08 6.3E-13 99.6 13.0 122 254-389 126-253 (278)
233 3kr9_A SAM-dependent methyltra 98.8 2E-08 6.7E-13 96.4 12.7 118 255-391 17-141 (225)
234 2b78_A Hypothetical protein SM 98.8 5.6E-09 1.9E-13 107.7 9.1 124 254-386 213-355 (385)
235 4dmg_A Putative uncharacterize 98.8 2.4E-08 8.3E-13 103.4 13.0 103 254-359 215-330 (393)
236 3m4x_A NOL1/NOP2/SUN family pr 98.8 2.1E-08 7.3E-13 105.7 11.3 126 255-389 107-259 (456)
237 3c0k_A UPF0064 protein YCCW; P 98.8 4.2E-08 1.4E-12 101.3 13.1 103 254-358 221-342 (396)
238 2as0_A Hypothetical protein PH 98.8 1.8E-08 6.3E-13 103.9 10.3 104 254-359 218-339 (396)
239 3lcv_B Sisomicin-gentamicin re 98.8 2.6E-08 8.9E-13 97.4 10.6 101 254-356 133-237 (281)
240 3frh_A 16S rRNA methylase; met 98.8 1.2E-08 4.2E-13 98.7 8.1 98 253-355 105-206 (253)
241 1wxx_A TT1595, hypothetical pr 98.7 2.4E-08 8.2E-13 102.7 10.5 101 255-358 211-328 (382)
242 2h1r_A Dimethyladenosine trans 98.7 3E-08 1E-12 98.7 10.3 85 232-330 29-118 (299)
243 3v97_A Ribosomal RNA large sub 98.7 1.4E-08 4.7E-13 112.6 8.4 101 255-357 541-659 (703)
244 2f8l_A Hypothetical protein LM 98.7 3.8E-08 1.3E-12 99.5 10.8 103 254-357 131-258 (344)
245 2ih2_A Modification methylase 98.7 3.2E-08 1.1E-12 102.0 9.7 114 231-357 25-166 (421)
246 2xyq_A Putative 2'-O-methyl tr 98.7 6.1E-08 2.1E-12 96.5 10.5 94 253-358 63-174 (290)
247 1yub_A Ermam, rRNA methyltrans 98.7 1.8E-09 6E-14 104.2 -1.2 112 232-356 16-146 (245)
248 2jjq_A Uncharacterized RNA met 98.7 2E-07 6.9E-12 97.4 14.0 93 254-355 291-387 (425)
249 2yx1_A Hypothetical protein MJ 98.6 8.2E-08 2.8E-12 97.1 10.0 93 254-358 196-294 (336)
250 1qam_A ERMC' methyltransferase 98.6 8.1E-08 2.8E-12 92.7 9.4 68 254-325 31-102 (244)
251 1uwv_A 23S rRNA (uracil-5-)-me 98.6 2.5E-07 8.7E-12 96.7 12.7 93 255-355 288-389 (433)
252 2okc_A Type I restriction enzy 98.6 1.6E-07 5.4E-12 98.5 10.3 117 231-356 157-308 (445)
253 3gru_A Dimethyladenosine trans 98.5 1.4E-07 4.6E-12 94.1 7.6 88 231-330 36-126 (295)
254 2qfm_A Spermine synthase; sper 98.4 3.1E-07 1.1E-11 93.8 8.3 102 253-356 188-315 (364)
255 3tqs_A Ribosomal RNA small sub 98.4 8.2E-07 2.8E-11 86.6 8.8 82 232-325 16-104 (255)
256 3k0b_A Predicted N6-adenine-sp 98.4 1.7E-06 5.7E-11 89.5 11.6 102 255-357 203-352 (393)
257 3ldu_A Putative methylase; str 98.3 1.6E-06 5.6E-11 89.3 11.1 102 255-357 197-346 (385)
258 2b9e_A NOL1/NOP2/SUN domain fa 98.3 5E-06 1.7E-10 83.3 13.8 105 255-360 104-239 (309)
259 3bt7_A TRNA (uracil-5-)-methyl 98.3 1.2E-06 4.1E-11 89.6 9.0 93 255-357 215-328 (369)
260 3evf_A RNA-directed RNA polyme 98.3 1.9E-06 6.5E-11 84.5 9.9 102 255-357 76-186 (277)
261 2efj_A 3,7-dimethylxanthine me 98.3 2.5E-06 8.6E-11 87.9 11.3 106 254-360 53-230 (384)
262 3ldg_A Putative uncharacterize 98.3 4.5E-06 1.5E-10 86.1 13.2 102 255-357 196-345 (384)
263 3b5i_A S-adenosyl-L-methionine 98.3 3.4E-06 1.1E-10 86.7 11.7 107 253-360 52-230 (374)
264 3fut_A Dimethyladenosine trans 98.2 2.7E-06 9.2E-11 83.7 9.0 86 232-330 34-122 (271)
265 1m6e_X S-adenosyl-L-methionnin 98.2 2.9E-06 9.9E-11 86.7 9.0 107 253-360 51-214 (359)
266 4gqb_A Protein arginine N-meth 98.2 6.4E-06 2.2E-10 89.9 12.2 97 254-352 358-464 (637)
267 3uzu_A Ribosomal RNA small sub 98.2 2.3E-06 7.9E-11 84.5 7.1 85 232-324 29-121 (279)
268 2dul_A N(2),N(2)-dimethylguano 98.2 3.3E-06 1.1E-10 86.9 8.5 95 255-355 49-164 (378)
269 2ar0_A M.ecoki, type I restric 98.2 4.4E-06 1.5E-10 89.8 9.8 117 232-356 156-313 (541)
270 1qyr_A KSGA, high level kasuga 98.1 3.2E-06 1.1E-10 82.2 7.6 84 232-326 8-99 (252)
271 3axs_A Probable N(2),N(2)-dime 98.1 8.2E-06 2.8E-10 84.4 10.9 97 254-355 53-158 (392)
272 3ftd_A Dimethyladenosine trans 98.1 1.3E-05 4.3E-10 77.8 11.1 83 232-324 18-102 (249)
273 2r6z_A UPF0341 protein in RSP 98.0 6.1E-06 2.1E-10 80.5 6.9 69 255-326 85-170 (258)
274 3khk_A Type I restriction-modi 98.0 1.9E-05 6.6E-10 84.9 10.8 103 255-357 246-397 (544)
275 1m6y_A S-adenosyl-methyltransf 98.0 6E-06 2E-10 82.4 6.3 86 231-325 12-106 (301)
276 3v97_A Ribosomal RNA large sub 98.0 2.5E-05 8.5E-10 86.6 11.3 104 255-358 192-350 (703)
277 3o4f_A Spermidine synthase; am 97.9 0.00012 4.1E-09 72.7 14.4 102 253-356 83-199 (294)
278 3ua3_A Protein arginine N-meth 97.9 1.1E-05 3.7E-10 88.5 6.2 99 254-352 410-531 (745)
279 3lkd_A Type I restriction-modi 97.8 0.00011 3.6E-09 79.1 13.1 123 231-357 203-360 (542)
280 3gcz_A Polyprotein; flavivirus 97.8 2.9E-05 1E-09 76.3 7.4 102 255-357 92-203 (282)
281 4auk_A Ribosomal RNA large sub 97.7 0.00034 1.2E-08 71.5 14.0 120 253-386 211-333 (375)
282 2qy6_A UPF0209 protein YFCK; s 97.7 2.6E-05 8.8E-10 76.1 5.4 101 253-353 60-211 (257)
283 3cvo_A Methyltransferase-like 97.7 0.00025 8.5E-09 66.7 11.4 92 254-355 31-154 (202)
284 3ll7_A Putative methyltransfer 97.7 2.4E-05 8.4E-10 81.2 4.4 68 254-324 94-170 (410)
285 3s1s_A Restriction endonucleas 97.6 0.00024 8.3E-09 79.1 12.3 104 254-357 322-467 (878)
286 2oyr_A UPF0341 protein YHIQ; a 97.6 4.9E-05 1.7E-09 74.2 5.0 90 255-349 90-194 (258)
287 3eld_A Methyltransferase; flav 97.5 0.00028 9.6E-09 69.8 8.9 103 253-357 81-193 (300)
288 2k4m_A TR8_protein, UPF0146 pr 97.3 0.0003 1E-08 62.8 6.3 84 254-357 36-123 (153)
289 4fzv_A Putative methyltransfer 97.3 0.0014 4.8E-08 66.8 12.1 105 255-360 150-289 (359)
290 3c6k_A Spermine synthase; sper 97.2 0.00072 2.5E-08 69.3 8.0 101 253-355 205-331 (381)
291 2wk1_A NOVP; transferase, O-me 97.1 0.005 1.7E-07 60.7 13.3 134 254-400 107-281 (282)
292 3lkz_A Non-structural protein 97.0 0.009 3.1E-07 59.1 13.5 101 255-360 96-209 (321)
293 2px2_A Genome polyprotein [con 96.8 0.0054 1.8E-07 59.6 10.1 100 254-357 74-185 (269)
294 1wg8_A Predicted S-adenosylmet 96.7 0.0042 1.4E-07 61.2 8.6 82 231-324 8-96 (285)
295 3ufb_A Type I restriction-modi 96.7 0.014 4.7E-07 62.5 13.2 118 231-356 203-363 (530)
296 3p8z_A Mtase, non-structural p 96.4 0.046 1.6E-06 52.5 13.5 102 255-360 80-191 (267)
297 2vz8_A Fatty acid synthase; tr 96.2 0.0013 4.5E-08 82.1 1.9 103 254-357 1241-1350(2512)
298 2zig_A TTHA0409, putative modi 96.1 0.0088 3E-07 58.9 6.8 40 255-297 237-276 (297)
299 1g55_A DNA cytosine methyltran 94.9 0.16 5.6E-06 50.9 11.5 70 255-324 3-75 (343)
300 3vyw_A MNMC2; tRNA wobble urid 93.5 0.21 7.2E-06 49.6 8.7 117 255-389 98-244 (308)
301 1f8f_A Benzyl alcohol dehydrog 92.8 0.14 4.8E-06 51.4 6.4 93 254-356 191-290 (371)
302 3qv2_A 5-cytosine DNA methyltr 92.7 0.76 2.6E-05 45.9 11.6 128 254-389 10-156 (327)
303 3r24_A NSP16, 2'-O-methyl tran 92.7 0.13 4.3E-06 51.0 5.6 96 253-358 109-220 (344)
304 1g60_A Adenine-specific methyl 92.7 0.2 7E-06 48.0 7.0 41 254-297 213-253 (260)
305 3g7u_A Cytosine-specific methy 92.3 2.4 8.2E-05 43.0 14.8 123 255-387 3-145 (376)
306 1pl8_A Human sorbitol dehydrog 92.1 0.43 1.5E-05 47.6 8.8 93 255-356 173-274 (356)
307 3tka_A Ribosomal RNA small sub 91.9 0.18 6.2E-06 50.8 5.7 85 231-323 43-134 (347)
308 2dph_A Formaldehyde dismutase; 91.7 0.57 1.9E-05 47.5 9.4 98 255-356 187-300 (398)
309 2zig_A TTHA0409, putative modi 91.7 0.27 9.1E-06 48.1 6.6 97 301-401 22-140 (297)
310 1pqw_A Polyketide synthase; ro 91.6 0.2 6.8E-06 45.3 5.2 89 254-356 39-138 (198)
311 1i4w_A Mitochondrial replicati 91.2 0.49 1.7E-05 47.8 8.1 76 232-310 39-116 (353)
312 1e3j_A NADP(H)-dependent ketos 90.6 0.95 3.3E-05 44.9 9.6 93 255-356 170-272 (352)
313 3two_A Mannitol dehydrogenase; 90.6 0.28 9.5E-06 48.8 5.6 90 254-357 177-267 (348)
314 4ej6_A Putative zinc-binding d 90.3 0.63 2.2E-05 46.7 8.1 93 255-357 184-286 (370)
315 1v3u_A Leukotriene B4 12- hydr 89.9 0.47 1.6E-05 46.7 6.6 92 254-356 146-245 (333)
316 3fpc_A NADP-dependent alcohol 89.8 0.41 1.4E-05 47.6 6.2 93 255-356 168-267 (352)
317 1kol_A Formaldehyde dehydrogen 89.4 0.57 2E-05 47.4 6.9 97 255-356 187-301 (398)
318 3ps9_A TRNA 5-methylaminomethy 88.6 0.89 3E-05 49.4 8.2 99 255-353 68-217 (676)
319 2h6e_A ADH-4, D-arabinose 1-de 88.6 0.5 1.7E-05 46.8 5.7 94 255-356 172-270 (344)
320 3s2e_A Zinc-containing alcohol 88.2 0.46 1.6E-05 46.9 5.2 92 254-357 167-265 (340)
321 1uuf_A YAHK, zinc-type alcohol 88.1 0.3 1E-05 49.2 3.8 91 254-356 195-289 (369)
322 1rjd_A PPM1P, carboxy methyl t 88.1 3 0.0001 41.6 11.0 103 254-359 98-236 (334)
323 3uog_A Alcohol dehydrogenase; 88.0 0.42 1.4E-05 47.8 4.7 93 254-357 190-289 (363)
324 4h0n_A DNMT2; SAH binding, tra 87.6 0.9 3.1E-05 45.4 6.9 128 255-389 4-145 (333)
325 4b7c_A Probable oxidoreductase 87.6 0.69 2.4E-05 45.5 6.0 92 254-356 150-249 (336)
326 3uko_A Alcohol dehydrogenase c 87.5 0.71 2.4E-05 46.4 6.1 94 254-356 194-296 (378)
327 2jhf_A Alcohol dehydrogenase E 87.4 0.91 3.1E-05 45.4 6.9 94 254-356 192-294 (374)
328 2j3h_A NADP-dependent oxidored 87.4 0.82 2.8E-05 45.0 6.4 92 254-355 156-255 (345)
329 1cdo_A Alcohol dehydrogenase; 87.4 0.77 2.6E-05 46.0 6.2 94 254-356 193-295 (374)
330 1p0f_A NADP-dependent alcohol 87.2 0.92 3.1E-05 45.4 6.7 94 254-356 192-294 (373)
331 3pvc_A TRNA 5-methylaminomethy 87.2 1.2 4.1E-05 48.6 8.1 100 254-353 59-209 (689)
332 1jvb_A NAD(H)-dependent alcoho 87.0 0.58 2E-05 46.4 5.0 94 254-356 171-272 (347)
333 3gms_A Putative NADPH:quinone 87.0 0.59 2E-05 46.2 5.1 92 254-356 145-244 (340)
334 1boo_A Protein (N-4 cytosine-s 86.8 2.1 7.3E-05 42.2 9.1 94 302-401 16-124 (323)
335 2hcy_A Alcohol dehydrogenase 1 86.7 0.49 1.7E-05 46.9 4.3 93 254-356 170-270 (347)
336 2fzw_A Alcohol dehydrogenase c 86.7 0.98 3.4E-05 45.1 6.6 94 254-356 191-293 (373)
337 3jv7_A ADH-A; dehydrogenase, n 85.9 1.1 3.7E-05 44.3 6.3 94 254-357 172-272 (345)
338 3nx4_A Putative oxidoreductase 85.5 1.4 4.8E-05 42.9 6.9 92 256-357 149-243 (324)
339 3m6i_A L-arabinitol 4-dehydrog 85.5 3.4 0.00012 40.9 9.9 93 255-356 181-284 (363)
340 1rjw_A ADH-HT, alcohol dehydro 85.4 2.7 9.4E-05 41.3 9.0 90 255-356 166-262 (339)
341 1e3i_A Alcohol dehydrogenase, 85.3 1.1 3.6E-05 45.0 6.0 95 254-356 196-298 (376)
342 2c7p_A Modification methylase 84.8 1.6 5.6E-05 43.4 7.0 123 255-387 12-147 (327)
343 4dvj_A Putative zinc-dependent 84.6 3 0.0001 41.6 9.0 91 254-355 172-270 (363)
344 3ubt_Y Modification methylase 84.6 8.1 0.00028 37.6 12.0 124 255-388 1-138 (331)
345 2qrv_A DNA (cytosine-5)-methyl 84.5 2.1 7.3E-05 42.0 7.6 71 254-324 16-90 (295)
346 2jml_A DNA binding domain/tran 83.4 0.3 1E-05 38.4 0.7 31 96-129 40-71 (81)
347 1yb5_A Quinone oxidoreductase; 83.4 1.4 4.8E-05 43.8 5.9 90 254-356 171-270 (351)
348 2d8a_A PH0655, probable L-thre 83.3 1.5 5.2E-05 43.3 6.1 93 254-356 168-268 (348)
349 3goh_A Alcohol dehydrogenase, 83.2 0.63 2.2E-05 45.4 3.2 86 254-355 143-229 (315)
350 2eih_A Alcohol dehydrogenase; 83.1 1.4 4.8E-05 43.5 5.7 90 254-356 167-266 (343)
351 3gpv_A Transcriptional regulat 82.9 0.42 1.4E-05 42.2 1.6 33 95-130 49-81 (148)
352 3jyn_A Quinone oxidoreductase; 82.6 1.1 3.8E-05 43.8 4.7 92 254-356 141-240 (325)
353 1g60_A Adenine-specific methyl 82.5 3.2 0.00011 39.4 7.9 72 313-402 19-104 (260)
354 2py6_A Methyltransferase FKBM; 82.2 1.6 5.6E-05 44.6 6.0 44 253-296 226-270 (409)
355 3hh0_A Transcriptional regulat 82.1 0.42 1.4E-05 42.1 1.3 32 95-129 37-68 (146)
356 2vz4_A Tipal, HTH-type transcr 81.4 0.47 1.6E-05 39.4 1.3 33 95-130 34-66 (108)
357 3qwb_A Probable quinone oxidor 81.4 1.4 4.7E-05 43.3 4.9 92 254-356 149-248 (334)
358 2c0c_A Zinc binding alcohol de 81.2 2.9 9.9E-05 41.6 7.3 92 254-356 164-262 (362)
359 1piw_A Hypothetical zinc-type 81.1 0.6 2.1E-05 46.6 2.1 94 254-356 180-277 (360)
360 2b5w_A Glucose dehydrogenase; 80.8 2.2 7.5E-05 42.4 6.2 90 255-356 174-274 (357)
361 2oo3_A Protein involved in cat 80.6 6.2 0.00021 38.5 9.1 101 255-359 93-202 (283)
362 1vj0_A Alcohol dehydrogenase, 80.4 1.8 6.1E-05 43.5 5.4 95 254-356 196-299 (380)
363 1qor_A Quinone oxidoreductase; 80.0 1.5 5.2E-05 42.8 4.7 91 254-356 141-240 (327)
364 3gp4_A Transcriptional regulat 80.0 0.52 1.8E-05 41.3 1.1 34 94-130 34-67 (142)
365 3ip1_A Alcohol dehydrogenase, 80.0 4.5 0.00015 40.9 8.3 95 254-357 214-320 (404)
366 1q06_A Transcriptional regulat 79.0 0.61 2.1E-05 40.4 1.2 33 95-130 33-65 (135)
367 4eye_A Probable oxidoreductase 78.7 1.6 5.6E-05 43.0 4.5 90 254-355 160-257 (342)
368 1r8d_A Transcription activator 78.7 0.66 2.2E-05 38.5 1.3 33 95-130 35-67 (109)
369 4eez_A Alcohol dehydrogenase 1 78.5 6.1 0.00021 38.6 8.6 95 255-357 165-265 (348)
370 3fbg_A Putative arginate lyase 78.2 4.2 0.00014 40.1 7.3 91 254-355 151-248 (346)
371 2uyo_A Hypothetical protein ML 78.0 29 0.00098 34.0 13.2 101 254-358 103-221 (310)
372 1xa0_A Putative NADPH dependen 77.9 1.6 5.5E-05 42.6 4.1 91 256-356 152-247 (328)
373 3me5_A Cytosine-specific methy 77.9 11 0.00037 39.6 10.6 56 254-311 88-146 (482)
374 1tt7_A YHFP; alcohol dehydroge 77.9 1.9 6.5E-05 42.1 4.6 90 256-356 153-248 (330)
375 1iz0_A Quinone oxidoreductase; 77.6 1.2 4.2E-05 43.0 3.1 88 254-356 126-219 (302)
376 2j8z_A Quinone oxidoreductase; 76.9 2.5 8.5E-05 42.0 5.2 92 254-356 163-262 (354)
377 1wly_A CAAR, 2-haloacrylate re 74.7 3.5 0.00012 40.3 5.6 92 254-356 146-245 (333)
378 2zhg_A Redox-sensitive transcr 74.5 0.77 2.6E-05 40.8 0.6 34 94-130 42-75 (154)
379 3tos_A CALS11; methyltransfera 73.7 7.3 0.00025 37.5 7.3 101 254-357 70-219 (257)
380 1boo_A Protein (N-4 cytosine-s 73.6 5.1 0.00017 39.5 6.4 41 254-297 253-293 (323)
381 3dmg_A Probable ribosomal RNA 73.6 8.4 0.00029 38.9 8.2 93 255-356 47-140 (381)
382 2dg6_A Putative transcriptiona 73.5 0.87 3E-05 43.0 0.7 34 94-130 32-66 (222)
383 2dq4_A L-threonine 3-dehydroge 72.3 2.8 9.7E-05 41.2 4.2 92 254-356 165-263 (343)
384 2zb4_A Prostaglandin reductase 72.0 5 0.00017 39.6 5.9 91 255-356 162-261 (357)
385 4a2c_A Galactitol-1-phosphate 71.1 11 0.00038 36.7 8.2 95 254-358 161-263 (346)
386 2cf5_A Atccad5, CAD, cinnamyl 70.8 1.3 4.4E-05 44.1 1.3 92 255-356 182-276 (357)
387 3krt_A Crotonyl COA reductase; 70.4 11 0.00037 38.7 8.3 92 254-356 229-345 (456)
388 3gaz_A Alcohol dehydrogenase s 70.2 4.1 0.00014 40.2 4.8 89 254-356 151-247 (343)
389 3qao_A LMO0526 protein, MERR-l 69.5 1.4 4.9E-05 42.1 1.3 34 94-130 35-68 (249)
390 4dup_A Quinone oxidoreductase; 68.9 3.3 0.00011 41.1 3.8 92 254-356 168-266 (353)
391 1r8e_A Multidrug-efflux transp 67.7 1.6 5.4E-05 41.7 1.1 34 94-130 38-71 (278)
392 4a0s_A Octenoyl-COA reductase/ 67.6 7.2 0.00025 39.8 6.2 92 254-356 221-337 (447)
393 1yqd_A Sinapyl alcohol dehydro 67.3 1.8 6.1E-05 43.3 1.5 92 255-356 189-283 (366)
394 2cdc_A Glucose dehydrogenase g 67.1 7.7 0.00026 38.4 6.2 88 254-357 181-280 (366)
395 3tqh_A Quinone oxidoreductase; 67.0 9.4 0.00032 37.0 6.7 89 255-355 154-245 (321)
396 2km1_A Protein DRE2; yeast, an 66.6 3.9 0.00013 35.6 3.3 43 311-353 53-96 (136)
397 1eg2_A Modification methylase 64.9 7.9 0.00027 38.2 5.7 42 254-298 243-287 (319)
398 3ggo_A Prephenate dehydrogenas 62.5 40 0.0014 32.8 10.3 91 255-353 34-126 (314)
399 3fwz_A Inner membrane protein 62.2 12 0.0004 31.6 5.6 91 255-355 8-105 (140)
400 3gqv_A Enoyl reductase; medium 61.5 10 0.00034 37.8 5.8 92 253-355 164-263 (371)
401 1zsy_A Mitochondrial 2-enoyl t 59.1 38 0.0013 33.2 9.5 92 254-355 168-270 (357)
402 1eg2_A Modification methylase 59.0 5.9 0.0002 39.1 3.5 44 313-356 54-107 (319)
403 3iei_A Leucine carboxyl methyl 55.8 1.6E+02 0.0055 29.0 14.2 144 254-398 91-286 (334)
404 2f1k_A Prephenate dehydrogenas 54.0 63 0.0022 30.1 9.8 85 256-352 2-88 (279)
405 3c85_A Putative glutathione-re 49.8 35 0.0012 29.8 6.8 92 255-355 40-139 (183)
406 2g5c_A Prephenate dehydrogenas 49.2 81 0.0028 29.4 9.7 90 256-353 3-94 (281)
407 1h2b_A Alcohol dehydrogenase; 46.1 26 0.00089 34.5 5.8 94 255-356 188-286 (359)
408 4dkj_A Cytosine-specific methy 45.7 56 0.0019 33.2 8.3 43 255-297 11-57 (403)
409 2vn8_A Reticulon-4-interacting 43.3 19 0.00066 35.6 4.4 93 254-356 184-281 (375)
410 3pi7_A NADH oxidoreductase; gr 43.2 19 0.00063 35.3 4.2 89 255-356 166-264 (349)
411 3swr_A DNA (cytosine-5)-methyl 42.8 40 0.0014 38.6 7.3 54 253-307 539-592 (1002)
412 4f3n_A Uncharacterized ACR, CO 42.6 20 0.00068 37.1 4.4 40 254-293 138-181 (432)
413 2vhw_A Alanine dehydrogenase; 42.3 9.8 0.00033 38.3 2.0 97 253-355 167-268 (377)
414 3nbm_A PTS system, lactose-spe 39.6 48 0.0016 27.3 5.5 77 255-354 7-83 (108)
415 3l9w_A Glutathione-regulated p 39.1 45 0.0015 33.9 6.4 91 255-356 5-103 (413)
416 1zcj_A Peroxisomal bifunctiona 38.6 1.6E+02 0.0056 30.0 10.7 88 254-354 37-149 (463)
417 3ius_A Uncharacterized conserv 38.3 1.6E+02 0.0055 26.9 9.9 66 255-326 6-72 (286)
418 2ew2_A 2-dehydropantoate 2-red 38.2 1.3E+02 0.0043 28.2 9.2 94 255-355 4-108 (316)
419 4a27_A Synaptic vesicle membra 37.2 19 0.00064 35.3 3.1 90 254-356 143-239 (349)
420 3c24_A Putative oxidoreductase 37.1 1.2E+02 0.004 28.5 8.8 84 255-352 12-98 (286)
421 1tvm_A PTS system, galactitol- 36.9 53 0.0018 26.9 5.5 52 259-324 25-76 (113)
422 3p2y_A Alanine dehydrogenase/p 35.8 23 0.00079 35.9 3.6 95 253-353 183-300 (381)
423 1zkd_A DUF185; NESG, RPR58, st 35.7 30 0.001 35.2 4.4 70 254-327 81-159 (387)
424 3g0o_A 3-hydroxyisobutyrate de 35.6 89 0.0031 29.7 7.7 88 255-353 8-100 (303)
425 3ce6_A Adenosylhomocysteinase; 35.2 60 0.0021 34.0 6.7 89 253-357 273-363 (494)
426 4hp8_A 2-deoxy-D-gluconate 3-d 33.8 1.6E+02 0.0055 27.7 8.9 71 254-325 9-87 (247)
427 3hwr_A 2-dehydropantoate 2-red 32.8 1.7E+02 0.0057 28.1 9.2 96 254-358 19-123 (318)
428 3llv_A Exopolyphosphatase-rela 32.0 1E+02 0.0035 25.2 6.6 89 255-355 7-103 (141)
429 3k6j_A Protein F01G10.3, confi 30.3 2.8E+02 0.0096 28.6 10.8 92 253-353 53-164 (460)
430 1gu7_A Enoyl-[acyl-carrier-pro 30.3 53 0.0018 32.1 5.1 91 255-356 169-276 (364)
431 3b1f_A Putative prephenate deh 29.8 2E+02 0.007 26.7 9.1 89 255-352 7-98 (290)
432 1e2b_A Enzyme IIB-cellobiose; 29.5 24 0.00081 28.9 2.0 53 256-324 5-57 (106)
433 2eez_A Alanine dehydrogenase; 29.2 28 0.00096 34.7 2.9 97 253-355 165-266 (369)
434 2cvz_A Dehydrogenase, 3-hydrox 27.9 1.2E+02 0.0041 28.1 7.0 85 256-354 3-89 (289)
435 4eso_A Putative oxidoreductase 26.6 3.2E+02 0.011 24.9 9.7 100 254-356 8-139 (255)
436 4dcm_A Ribosomal RNA large sub 26.6 1.2E+02 0.0042 30.1 7.1 92 255-356 40-137 (375)
437 4e21_A 6-phosphogluconate dehy 26.1 1.1E+02 0.0038 30.3 6.7 90 255-354 23-114 (358)
438 2h78_A Hibadh, 3-hydroxyisobut 25.8 96 0.0033 29.3 6.0 42 255-299 4-47 (302)
439 3trk_A Nonstructural polyprote 25.5 46 0.0016 32.3 3.4 50 311-360 205-264 (324)
440 4gua_A Non-structural polyprot 24.3 72 0.0025 34.1 4.9 70 311-390 216-295 (670)
441 3av4_A DNA (cytosine-5)-methyl 23.8 1.8E+02 0.0062 34.3 8.6 50 254-304 851-900 (1330)
442 3qha_A Putative oxidoreductase 23.1 69 0.0024 30.5 4.3 87 255-354 16-104 (296)
443 4dio_A NAD(P) transhydrogenase 22.8 73 0.0025 32.5 4.6 96 253-354 189-311 (405)
444 3i83_A 2-dehydropantoate 2-red 22.3 3.4E+02 0.012 25.8 9.2 95 255-358 3-108 (320)
445 4e12_A Diketoreductase; oxidor 22.2 3.7E+02 0.013 25.0 9.3 89 255-352 5-118 (283)
446 4ft4_B DNA (cytosine-5)-methyl 21.3 89 0.003 34.2 5.3 56 253-308 211-270 (784)
447 1bg6_A N-(1-D-carboxylethyl)-L 21.1 1.8E+02 0.0063 27.7 7.1 93 255-354 5-108 (359)
448 1vpd_A Tartronate semialdehyde 20.6 1E+02 0.0035 28.9 5.0 87 255-353 6-97 (299)
449 1l7d_A Nicotinamide nucleotide 20.4 33 0.0011 34.4 1.4 43 253-298 171-215 (384)
450 3ond_A Adenosylhomocysteinase; 20.4 2.5E+02 0.0084 29.3 8.1 86 254-357 265-354 (488)
451 4ezb_A Uncharacterized conserv 20.0 2.5E+02 0.0086 26.8 7.8 88 255-355 25-121 (317)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.71 E-value=3.3e-17 Score=160.64 Aligned_cols=128 Identities=18% Similarity=0.243 Sum_probs=95.4
Q ss_pred cccccccccch-hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC
Q 011964 220 FRSASLIFDGV-EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG 298 (474)
Q Consensus 220 F~~~~~~yd~~-~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg 298 (474)
|+..+..|+.. ..|...+.+.+....+ ...+|||||||+|.++..|++.+ .+|+|+|+|+.|++.|+++
T Consensus 11 F~~~a~~Y~~~Rp~yp~~l~~~l~~~~~------~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~~- 80 (257)
T 4hg2_A 11 FTPVADAYRAFRPRYPRALFRWLGEVAP------ARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALRH- 80 (257)
T ss_dssp ---------CCCCCCCHHHHHHHHHHSS------CSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCCC-
T ss_pred HHHHHHHHHHHCCCcHHHHHHHHHHhcC------CCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhhc-
Confidence 66666667543 3444555555442222 34689999999999999999885 4799999999999988653
Q ss_pred CCcEEEeecccCCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 299 LPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 299 ~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
.++.+.+++++++|+++++||+|+|..++ ||. +.+.+++|+.|+|||||.|++......
T Consensus 81 ~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 81 PRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp TTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred CCceeehhhhhhhcccCCcccEEEEeeeh-hHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 46788899999999999999999999885 663 577899999999999999999886544
No 2
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.66 E-value=2.8e-15 Score=140.85 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=105.9
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC-CcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.++++.. ++.+..+|+..++++ ++||+|++..+++++ .+
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~-~~ 121 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHL-TD 121 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGS-CH
T ss_pred CeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcC-Ch
Confidence 789999999999999999885 489999999999999998755 677888899999988 899999999886666 55
Q ss_pred HHH--HHHHHHhhcCCCcEEEEEeCCCCchhhhhhH-------------HHHH-----HHHHHHHHHHhhCceEEeeecc
Q 011964 334 DGI--LLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK-------------ENQK-----RWNFVRDFVENLCWELVSQQDE 393 (474)
Q Consensus 334 ~~~--~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~-------------e~~~-----~w~~~~~la~~l~W~~~~~~~~ 393 (474)
... +|+++.++|||||++++.++........... .... .-..+..++++.||+.......
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 122 DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc
Confidence 555 9999999999999999998765432111000 0000 1256778888889887765444
Q ss_pred eeEE
Q 011964 394 TVVW 397 (474)
Q Consensus 394 ~~iw 397 (474)
...|
T Consensus 202 ~~~w 205 (220)
T 3hnr_A 202 HFVW 205 (220)
T ss_dssp SSEE
T ss_pred ceEE
Confidence 3333
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.65 E-value=2.9e-15 Score=144.86 Aligned_cols=145 Identities=14% Similarity=0.212 Sum_probs=107.5
Q ss_pred HHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeeccc
Q 011964 235 HQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASK 309 (474)
Q Consensus 235 ~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~ 309 (474)
..+.+.+...++ .+|||||||+|.++..+++.+ ..++++|+|+.|++.|+++ +. ++.+..+|++
T Consensus 27 ~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~ 95 (260)
T 1vl5_A 27 AKLMQIAALKGN--------EEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE 95 (260)
T ss_dssp HHHHHHHTCCSC--------CEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred HHHHHHhCCCCC--------CEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH
Confidence 445555554443 799999999999999999885 3899999999999988765 33 4778888999
Q ss_pred CCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHH-H-----------HHHHHHHH
Q 011964 310 QLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE-N-----------QKRWNFVR 377 (474)
Q Consensus 310 ~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e-~-----------~~~w~~~~ 377 (474)
.+|+++++||+|++..+++++ +++..+|.++.|+|||||+|++.++............ . ......+.
T Consensus 96 ~l~~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (260)
T 1vl5_A 96 QMPFTDERFHIVTCRIAAHHF-PNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWL 174 (260)
T ss_dssp CCCSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHH
T ss_pred hCCCCCCCEEEEEEhhhhHhc-CCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHH
Confidence 999999999999999886666 7888999999999999999999876433211110000 0 00124566
Q ss_pred HHHHhhCceEEeee
Q 011964 378 DFVENLCWELVSQQ 391 (474)
Q Consensus 378 ~la~~l~W~~~~~~ 391 (474)
.++++.+|+.+...
T Consensus 175 ~~l~~aGf~~~~~~ 188 (260)
T 1vl5_A 175 KMLEEAGFELEELH 188 (260)
T ss_dssp HHHHHHTCEEEEEE
T ss_pred HHHHHCCCeEEEEE
Confidence 77788888866543
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.63 E-value=1.8e-15 Score=142.12 Aligned_cols=135 Identities=19% Similarity=0.118 Sum_probs=106.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.+|||||||+|.++..+++.+.....++++|+++.+++.|+++ ++ ++.+..+|...+++++++||+|++..++++
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 118 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHE 118 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhhh
Confidence 7999999999999999998742346899999999999988765 33 477888899999999999999999988666
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEee
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
+ .+...+++++.++|||||++++.++...................+..+++..+|+.+..
T Consensus 119 ~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 119 L-SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp C-SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred c-CCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 6 77889999999999999999999865543211111111122356778888999997764
No 5
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.63 E-value=2.6e-15 Score=147.35 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=85.9
Q ss_pred CceEEEECCCCchHHHHhhhcC-CceeEEEEecCCHHHHHHHHHc----C--CCcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKE-LLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g-~~~~~v~giD~s~~~l~~A~er----g--~~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
..+|||||||+|.++..|+++. .....|+|+|+|+.|++.|+++ + .++.+.++|+..+|++ .||+|++..+
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~ 148 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNFT 148 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEESC
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeeee
Confidence 3789999999999999998762 2346899999999999999876 2 3577888899888875 5999999988
Q ss_pred cccccc-cHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 327 GVDWDQ-KDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 327 l~~~~~-d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
++++.+ +...+|++++|+|||||.|+++++....
T Consensus 149 l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~ 183 (261)
T 4gek_A 149 LQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFE 183 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCS
T ss_pred eeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCC
Confidence 665532 2347899999999999999999876543
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.63 E-value=1.4e-15 Score=141.27 Aligned_cols=136 Identities=15% Similarity=0.095 Sum_probs=109.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccc-cc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-QK 333 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~-~d 333 (474)
.+|||||||+|.++..+++.+ ..++++|+++.|++.|+++..++.+..+++..+++++++||+|++..+++|+. .+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLG---HQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTT---CCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CeEEEecCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 689999999999999999885 37999999999999999987788899999999999999999999998877774 36
Q ss_pred HHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhH---HHHHHHHHHHHHHHhhCceEEeeecc
Q 011964 334 DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK---ENQKRWNFVRDFVENLCWELVSQQDE 393 (474)
Q Consensus 334 ~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~---e~~~~w~~~~~la~~l~W~~~~~~~~ 393 (474)
...+|+++.++|||||++++.++........... ........+..++++.||+.+.....
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEec
Confidence 7899999999999999999998765431110000 00112356678888999998875433
No 7
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.62 E-value=7.3e-15 Score=136.85 Aligned_cols=103 Identities=21% Similarity=0.272 Sum_probs=90.3
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+|||||||+|.++..+++. ....++++|+++.+++.|+++ ++ ++.+..+|...+++++++||+|++..+++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHh
Confidence 38999999999999999987 347899999999999998876 33 57788899999999999999999998866
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
|+ .+...+|+++.++|||||++++.++....
T Consensus 123 ~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 123 FW-EDVATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp GC-SCHHHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred hc-cCHHHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 66 78889999999999999999999866543
No 8
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.62 E-value=8.9e-15 Score=138.80 Aligned_cols=133 Identities=14% Similarity=0.060 Sum_probs=103.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC-CcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
..+|||||||+|.++..+++.+. .++++|+++.+++.|+++.. ++.+..++++.+ +++++||+|++..+++|+ +
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~-~ 117 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHI-D 117 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGC-S
T ss_pred CCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhh-c
Confidence 36899999999999999998853 78999999999999998754 677888888887 578899999999986666 7
Q ss_pred cHHHHHHHHH-hhcCCCcEEEEEeCCCCchhhhh--------------hHH------HHHHHHHHHHHHHhhCceEEeee
Q 011964 333 KDGILLLEVD-RVLKPGGYFVWTSPLTNPQAFLR--------------NKE------NQKRWNFVRDFVENLCWELVSQQ 391 (474)
Q Consensus 333 d~~~~L~ei~-RvLKPGG~lvis~~~~~~~~~~~--------------~~e------~~~~w~~~~~la~~l~W~~~~~~ 391 (474)
++..+|+++. |+|||||+++++++......... ... ..-.-..+..+++..+|+.+...
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 7889999999 99999999999998765321100 000 00122466778888888877643
No 9
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.62 E-value=9.2e-15 Score=139.08 Aligned_cols=133 Identities=19% Similarity=0.134 Sum_probs=106.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc--CCCcEEEeecccCCCCCCCCeeEEEecccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER--GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 331 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er--g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~ 331 (474)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++ ..++.+..+++..+++++++||+|++..+++|+
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~- 129 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTG---YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT- 129 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS-
T ss_pred CCeEEEEcCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc-
Confidence 3689999999999999999985 4799999999999999987 346778888999999999999999999886666
Q ss_pred ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHH---------HHHHHHHHHHHHhhCceEEee
Q 011964 332 QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKEN---------QKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 332 ~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~---------~~~w~~~~~la~~l~W~~~~~ 390 (474)
.++..++.++.++|||||++++.++............. ...-..+..+++..||+.+..
T Consensus 130 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 130 EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 78889999999999999999999876543211100000 011246788889999998764
No 10
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.61 E-value=1.3e-15 Score=143.23 Aligned_cols=98 Identities=9% Similarity=-0.055 Sum_probs=82.4
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-----------------CCCcEEEeecccCCCCCC-C
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------------GLPAMIGSFASKQLPYPS-L 316 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-----------------g~~~~~~~~d~~~Lpf~d-~ 316 (474)
.+|||+|||+|..+..|++++ ..|+|+|+|+.|++.|+++ ..++.+.++|+..+++++ +
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 789999999999999999986 4899999999999999876 235788899999999876 8
Q ss_pred CeeEEEeccccccccc-cHHHHHHHHHhhcCCCcEEEEEe
Q 011964 317 SFDMLHCARCGVDWDQ-KDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 317 sFDlVvss~~l~~~~~-d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
+||+|++..+++++.. +...+++++.|+|||||++++..
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999999877666643 23579999999999999855444
No 11
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.61 E-value=3.6e-15 Score=143.33 Aligned_cols=145 Identities=14% Similarity=0.140 Sum_probs=107.6
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEE
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIG 304 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~ 304 (474)
......+.+.+...++ .+|||||||+|.++..+++.. ...++++|+++.|++.|+++ ++ ++.+.
T Consensus 22 ~~~~~~l~~~~~~~~~--------~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~ 91 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPG--------TRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFI 91 (256)
T ss_dssp HHHHHHHHHHTCCCTT--------CEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 4455566666554444 799999999999999998863 25789999999999988765 44 47788
Q ss_pred eecccCCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHH-----------HH
Q 011964 305 SFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQK-----------RW 373 (474)
Q Consensus 305 ~~d~~~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~-----------~w 373 (474)
.+|+..+++ +++||+|+|..+++++ .+...+|+++.|+|||||++++.++....... ...... ..
T Consensus 92 ~~d~~~~~~-~~~fD~V~~~~~~~~~-~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 167 (256)
T 1nkv_A 92 HNDAAGYVA-NEKCDVAACVGATWIA-GGFAGAEELLAQSLKPGGIMLIGEPYWRQLPA--TEEIAQACGVSSTSDFLTL 167 (256)
T ss_dssp ESCCTTCCC-SSCEEEEEEESCGGGT-SSSHHHHHHHTTSEEEEEEEEEEEEEETTCCS--SHHHHHTTTCSCGGGSCCH
T ss_pred ECChHhCCc-CCCCCEEEECCChHhc-CCHHHHHHHHHHHcCCCeEEEEecCcccCCCC--hHHHHHHHhcccccccCCH
Confidence 899999988 8899999999886666 67789999999999999999999875432110 011111 12
Q ss_pred HHHHHHHHhhCceEEe
Q 011964 374 NFVRDFVENLCWELVS 389 (474)
Q Consensus 374 ~~~~~la~~l~W~~~~ 389 (474)
..+..++++.+|+.+.
T Consensus 168 ~~~~~~l~~aGf~~~~ 183 (256)
T 1nkv_A 168 PGLVGAFDDLGYDVVE 183 (256)
T ss_dssp HHHHHHHHTTTBCCCE
T ss_pred HHHHHHHHHCCCeeEE
Confidence 4556777778877543
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.61 E-value=6.5e-15 Score=143.11 Aligned_cols=130 Identities=19% Similarity=0.169 Sum_probs=103.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.+ ...++++|+++.+++.|+++ ++ ++.+..+|+..+|+++++||+|++..++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHV--TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTC--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCEEEEeCCCCCHHHHHHHhcc--CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 4799999999999999999883 35899999999999988765 43 3788889999999999999999999887
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHH----------HHHHHHHHhhCceEEe
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRW----------NFVRDFVENLCWELVS 389 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w----------~~~~~la~~l~W~~~~ 389 (474)
+++ +...+++++.++|||||++++.++...... ........| ..+..++++.||+.+.
T Consensus 125 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 125 YNI--GFERGLNEWRKYLKKGGYLAVSECSWFTDE--RPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp GGT--CHHHHHHHHGGGEEEEEEEEEEEEEESSSC--CCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEE
T ss_pred eec--CHHHHHHHHHHHcCCCCEEEEEEeeecCCC--ChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEE
Confidence 666 678899999999999999999987532211 112222333 4566778888888765
No 13
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.61 E-value=8.7e-15 Score=142.16 Aligned_cols=102 Identities=26% Similarity=0.402 Sum_probs=88.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.. ..+++++|+|+.+++.|+++ ++ .+.+..+|+..+|+++++||+|++..++
T Consensus 62 ~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 62 GDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESL 139 (273)
T ss_dssp TCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCT
T ss_pred CCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechh
Confidence 3799999999999999998863 36899999999999988765 43 4778888999999999999999999886
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+|+ .+...+|+++.++|||||++++.++..
T Consensus 140 ~~~-~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 140 HHM-PDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp TTS-SCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred hhC-CCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 666 778899999999999999999998754
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.60 E-value=9.2e-15 Score=140.55 Aligned_cols=130 Identities=18% Similarity=0.157 Sum_probs=102.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.+. ..++++|+++.+++.|+++ ++. +.+..+|+..+|+++++||+|++..++
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAI 124 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCS
T ss_pred CCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChH
Confidence 36999999999999999998853 3899999999999988765 443 778889999999999999999999887
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHH----------HHHHHHHHhhCceEEe
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRW----------NFVRDFVENLCWELVS 389 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w----------~~~~~la~~l~W~~~~ 389 (474)
+++ +...+++++.++|||||++++.++.+.... ........| ..+..++++.||+.+.
T Consensus 125 ~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 125 YNI--GFERGMNEWSKYLKKGGFIAVSEASWFTSE--RPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp CCC--CHHHHHHHHHTTEEEEEEEEEEEEEESSSC--CCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred hhc--CHHHHHHHHHHHcCCCcEEEEEEeeccCCC--ChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 666 678899999999999999999986533211 112222333 3556777888887765
No 15
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.60 E-value=8.4e-16 Score=147.40 Aligned_cols=135 Identities=13% Similarity=0.152 Sum_probs=102.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCCCCCCCeeEEEeccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
..+|||||||+|.++..+++.+ ...++++|+++.+++.|+++. ..+.+..++...+++++++||+|++..+++|+
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 4799999999999999998875 357999999999999998874 34677888888999999999999999987766
Q ss_pred c-ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhh---HHHHHHHHHHHHHHHhhCceEEee
Q 011964 331 D-QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN---KENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 331 ~-~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~---~e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
. .+...+|+++.++|||||++++.++.......... ......-..+..+++..+|+.+..
T Consensus 172 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 172 TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 4 34578999999999999999999864322111000 000112245677788888887654
No 16
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.60 E-value=3.5e-15 Score=134.78 Aligned_cols=128 Identities=16% Similarity=0.099 Sum_probs=99.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccccH
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKD 334 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d~ 334 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.++++..++.+...+ +++++++||+|++..+++++ .+.
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~-~~~ 91 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDM-DDK 91 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTC-SCH
T ss_pred CeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcc-cCH
Confidence 689999999999999999885 38999999999999999886677777766 78889999999999886666 788
Q ss_pred HHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEeee
Q 011964 335 GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 391 (474)
Q Consensus 335 ~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~~ 391 (474)
..+++++.|+|||||++++.++........+.....-..+.+..+.+ +|+.+...
T Consensus 92 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 92 QHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 89999999999999999999876543221111111112234555666 88876643
No 17
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.60 E-value=9.6e-15 Score=140.52 Aligned_cols=136 Identities=15% Similarity=0.148 Sum_probs=105.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCCCCCCCeeEEEeccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
..+|||||||+|.++..+++.. ...++++|+++.+++.|+++. .++.+...|...+|+++++||+|++..+++|+
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhc
Confidence 4799999999999999999872 358999999999999999875 46778888999999999999999999886665
Q ss_pred c-ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHH--H-------HHHHHHHHHHHHhhCceEEeee
Q 011964 331 D-QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE--N-------QKRWNFVRDFVENLCWELVSQQ 391 (474)
Q Consensus 331 ~-~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e--~-------~~~w~~~~~la~~l~W~~~~~~ 391 (474)
. .+...+|+++.|+|||||++++.++............ . ...-..+..+++..+|+.+...
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 3 5667899999999999999999987544311111000 0 0112466777888888876644
No 18
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.59 E-value=1.5e-14 Score=142.58 Aligned_cols=135 Identities=19% Similarity=0.204 Sum_probs=103.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.. ...++++|+++.+++.|+++ ++ .+.+..+|+..+|+++++||+|++..++
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 3799999999999999998871 24899999999999988765 33 4778888999999999999999999987
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhh-HHHH--------HHHHHHHHHHHhhCceEEeee
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN-KENQ--------KRWNFVRDFVENLCWELVSQQ 391 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~-~e~~--------~~w~~~~~la~~l~W~~~~~~ 391 (474)
+|+ .+...+|+++.|+|||||++++.++.......... .... ..-..+..+++..||+.+...
T Consensus 161 ~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 161 LHS-PDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp GGC-SCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hhc-CCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 777 66889999999999999999999875432111000 0000 012355677888888877643
No 19
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.59 E-value=4.2e-14 Score=135.47 Aligned_cols=101 Identities=24% Similarity=0.362 Sum_probs=88.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.++++ ++ ++.+..++++.+|+++++||+|++..+++|
T Consensus 23 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 99 (239)
T 1xxl_A 23 HRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHH 99 (239)
T ss_dssp CEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhh
Confidence 799999999999999999875 3899999999999988765 33 477888899999999999999999988777
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
+ .+...+|.++.|+|||||++++.++...
T Consensus 100 ~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 100 F-SDVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp C-SCHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred c-cCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 6 6788999999999999999999887543
No 20
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.58 E-value=1.4e-14 Score=139.38 Aligned_cols=102 Identities=14% Similarity=0.143 Sum_probs=90.2
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC--CCcEEEeecccCCCCCCCCeeEEEeccccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--LPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg--~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
...+|||||||+|.++..+++.+. ..++++|+++.+++.|+++. ..+.+..+|+..+|+++++||+|++..+++++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 347999999999999999999864 38999999999999998874 46778889999999999999999999986666
Q ss_pred cccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 331 DQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 331 ~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.+...+|+++.++|||||.++++.+.
T Consensus 122 -~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 122 -ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 78889999999999999999998654
No 21
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=5.4e-15 Score=143.68 Aligned_cols=113 Identities=18% Similarity=0.167 Sum_probs=95.6
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL 311 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L 311 (474)
.+.+.+.+.+...+ ..+|||||||+|.++..+++.+ ..++++|+|+.|++.|+++. ++.+...|++.+
T Consensus 21 ~~~~~l~~~~~~~~--------~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~ 88 (261)
T 3ege_A 21 RIVNAIINLLNLPK--------GSVIADIGAGTGGYSVALANQG---LFVYAVEPSIVMRQQAVVHP-QVEWFTGYAENL 88 (261)
T ss_dssp HHHHHHHHHHCCCT--------TCEEEEETCTTSHHHHHHHTTT---CEEEEECSCHHHHHSSCCCT-TEEEECCCTTSC
T ss_pred HHHHHHHHHhCCCC--------CCEEEEEcCcccHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcc-CCEEEECchhhC
Confidence 44555555555433 3799999999999999999864 58999999999999887765 788889999999
Q ss_pred CCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 312 PYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 312 pf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
|+++++||+|++..+++|+ .+...++++++|+|| ||++++.++..
T Consensus 89 ~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 89 ALPDKSVDGVISILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp CSCTTCBSEEEEESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred CCCCCCEeEEEEcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 9999999999999986666 888999999999999 99998888754
No 22
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=2.5e-14 Score=140.04 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=88.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccccH
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKD 334 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d~ 334 (474)
.+|||||||+|.++..+++.+ ..++++|+|+.|++.++++..++.+..+|++.+|+ +++||+|++..+++++ .++
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~-~d~ 133 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQSG---AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLHWV-KEP 133 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGGGC-SCH
T ss_pred CEEEEecCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhhhC-cCH
Confidence 789999999999999999854 58999999999999999886667788889999987 5799999999885554 788
Q ss_pred HHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 335 GILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 335 ~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
..+|+++.|+|||||++++..+...
T Consensus 134 ~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 134 EAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred HHHHHHHHHhcCCCcEEEEEecCCc
Confidence 8999999999999999999987654
No 23
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.56 E-value=4.7e-14 Score=133.87 Aligned_cols=105 Identities=18% Similarity=0.194 Sum_probs=89.3
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC---CcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~---~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
...+|||||||+|.++..+++.. ....++++|+++.+++.|+++.. ++.+..+|+..++++ ++||+|++..++++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHH 121 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCcccc
Confidence 34799999999999999999873 24689999999999999988732 577888899999888 89999999988777
Q ss_pred ccccHH--HHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 330 WDQKDG--ILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 330 ~~~d~~--~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
+ .+.. .+++++.|+|||||+++++++....
T Consensus 122 ~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 122 L-EDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp S-CHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred C-CHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 6 4443 5999999999999999999976654
No 24
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.56 E-value=3.4e-14 Score=132.69 Aligned_cols=101 Identities=25% Similarity=0.255 Sum_probs=88.4
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
...+|||||||+|.++..+ +. ..++++|+++.+++.++++...+.+..++...+|+++++||+|++..+++|+ +
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFV-E 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTC-S
T ss_pred CCCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhc-C
Confidence 3478999999999999888 22 2789999999999999988666788888999999999999999999886665 6
Q ss_pred cHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 333 KDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 333 d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
++..+++++.++|||||.++++++...
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 888999999999999999999998654
No 25
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.56 E-value=1.9e-14 Score=148.18 Aligned_cols=136 Identities=17% Similarity=0.125 Sum_probs=104.7
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc---------C----CCcEEEeecccCC------CC
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---------G----LPAMIGSFASKQL------PY 313 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er---------g----~~~~~~~~d~~~L------pf 313 (474)
...+|||||||+|.++..+++.......++++|+++.|++.|+++ | .++.+..+|+..+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 457999999999999999987622235899999999999999876 4 4678888898887 99
Q ss_pred CCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHH----------HHHHHHHHHHHhh
Q 011964 314 PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQ----------KRWNFVRDFVENL 383 (474)
Q Consensus 314 ~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~----------~~w~~~~~la~~l 383 (474)
++++||+|++..+++++ .+...+|+++.|+|||||+|+++++.............. ..+..+..++++.
T Consensus 163 ~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLS-TNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCEEEEEEccchhcC-CCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 99999999999885555 788899999999999999999998654321100000111 1236778889999
Q ss_pred CceEEe
Q 011964 384 CWELVS 389 (474)
Q Consensus 384 ~W~~~~ 389 (474)
+|+.+.
T Consensus 242 GF~~v~ 247 (383)
T 4fsd_A 242 GFRDVR 247 (383)
T ss_dssp TCCCEE
T ss_pred CCceEE
Confidence 997653
No 26
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.56 E-value=5e-14 Score=131.48 Aligned_cols=99 Identities=15% Similarity=0.187 Sum_probs=87.3
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC-CCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-LPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg-~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|++.+ .++.+..+|+..+ +++++||+|++..+++|+ ++
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~-~~ 122 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHV-PD 122 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGS-CH
T ss_pred CeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcC-CH
Confidence 689999999999999999885 48999999999999999877 4677888888888 888999999999886666 44
Q ss_pred H--HHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 334 D--GILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 334 ~--~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+ ..+|+++.++|||||.+++.++..
T Consensus 123 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 123 DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 3 689999999999999999998765
No 27
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.55 E-value=1.7e-14 Score=137.92 Aligned_cols=130 Identities=18% Similarity=0.155 Sum_probs=100.1
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC--CCCCCCeeEEEecccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL--PYPSLSFDMLHCARCGVDWD 331 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L--pf~d~sFDlVvss~~l~~~~ 331 (474)
..+|||||||+|.++..+++.+. .++++|+|+.+++.|+++ +.+..++...+ |+++++||+|+|..+++|+.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~ 115 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLD 115 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSC
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCC
Confidence 47899999999999999998753 689999999999999987 66777777665 88999999999999877763
Q ss_pred c-cHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhH----H--HHHHHHHHHHHHHhhCceEEe
Q 011964 332 Q-KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK----E--NQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 332 ~-d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~----e--~~~~w~~~~~la~~l~W~~~~ 389 (474)
. +...+++++.|+|||||++++.++........... . ....-..+..++++.+|+.+.
T Consensus 116 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 180 (240)
T 3dli_A 116 PERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVK 180 (240)
T ss_dssp GGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEE
T ss_pred cHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEE
Confidence 2 34789999999999999999999876542111000 0 001125667788888888654
No 28
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.55 E-value=1.1e-13 Score=130.45 Aligned_cols=103 Identities=27% Similarity=0.336 Sum_probs=88.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----C------CcEEEeecccCCCCCCCCeeEEEe
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----~------~~~~~~~d~~~Lpf~d~sFDlVvs 323 (474)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++. + .+.+...+...+++++++||+|++
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKG---YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 3689999999999999999885 48999999999999998752 2 356788889999999999999999
Q ss_pred ccccccccccHH---HHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 324 ARCGVDWDQKDG---ILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 324 s~~l~~~~~d~~---~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
..+++++ .++. .+++++.++|||||++++.++....
T Consensus 108 ~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 108 QAFLTSV-PDPKERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp ESCGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred cchhhcC-CCHHHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 9886666 5555 8999999999999999999876543
No 29
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.54 E-value=5.6e-14 Score=140.14 Aligned_cols=136 Identities=16% Similarity=0.063 Sum_probs=104.8
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
...+|||||||+|.++..+++.. ...++++|+++.+++.|+++ ++ ++.+..+|+..+|+++++||+|++..+
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 34799999999999999999872 25799999999999988765 44 478888999999999999999999988
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHH---HH-------HHHHHHHHHHHhhCceEEeeec
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE---NQ-------KRWNFVRDFVENLCWELVSQQD 392 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e---~~-------~~w~~~~~la~~l~W~~~~~~~ 392 (474)
++++ +...+|+++.|+|||||++++.++............ .. .....+..++++.||+.+....
T Consensus 195 l~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 195 TMYV--DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp GGGS--CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEE
T ss_pred hhhC--CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 6666 488999999999999999999986544321000000 00 0125667788888998776543
No 30
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.54 E-value=3.8e-14 Score=139.00 Aligned_cols=101 Identities=15% Similarity=0.126 Sum_probs=88.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCC-CCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lp-f~d~sFDlVvss~~ 326 (474)
..+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ ++ .+.+..+++..++ +++++||+|++..+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERG---HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 4689999999999999999885 4899999999999999876 33 4668888988888 88899999999988
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
++++ +++..+|+++.++|||||++++.++..
T Consensus 146 l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 146 LEWV-ADPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp GGGC-SCHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred hhcc-cCHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 6666 788899999999999999999998753
No 31
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.54 E-value=3.6e-14 Score=138.22 Aligned_cols=103 Identities=22% Similarity=0.271 Sum_probs=89.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
..+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++ ++.+...|...+++++++||+|++..++.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLE 116 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhh
Confidence 4799999999999999999873 236899999999999988765 33 57788889999999999999999998866
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
++ .++..++.++.++|||||++++.++..
T Consensus 117 ~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 117 HL-QSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp GC-SCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred hc-CCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 65 778899999999999999999998654
No 32
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.54 E-value=4.5e-14 Score=135.80 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=86.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+|||||||+|.++..+++.+ ..++++|+++.|++.|+++ ..++.+..+|+..+|+++++||+|++..++++
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 4789999999999999999874 4799999999999999887 34677888899999999999999999988555
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEE
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis 354 (474)
+ ++...++.++.++|||||.+++.
T Consensus 117 ~-~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 V-PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp C-TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred c-CCHHHHHHHHHHHCCCCcEEEEE
Confidence 4 67889999999999999999987
No 33
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.53 E-value=3.4e-14 Score=137.82 Aligned_cols=101 Identities=21% Similarity=0.348 Sum_probs=89.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
..+|||||||+|.++..+++.+ ..++++|+++.|++.|+++... .+..+++..+|+++++||+|++..+++|+..+
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 4789999999999999999885 4799999999999999988653 37778889999999999999998877888677
Q ss_pred HHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 334 DGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 334 ~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
...+|+++.++|||||.+++..+..
T Consensus 131 ~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 131 KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 8899999999999999999998753
No 34
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.53 E-value=1.9e-14 Score=141.32 Aligned_cols=115 Identities=17% Similarity=0.293 Sum_probs=93.4
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------CCc
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPA 301 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------~~~ 301 (474)
..+.+.+.+.+...++ .+|||||||+|.++..+++.+. .++++|+|+.|++.|+++. ..+
T Consensus 43 ~~~~~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGC--------HRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHHHHHTTC--------CEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHHHHHhcccCC--------CEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhccccccccee
Confidence 4455566666654433 7899999999999999999863 8999999999999997641 245
Q ss_pred EEEeecccCCC---CCCCCeeEEEec-ccccccccc-------HHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 302 MIGSFASKQLP---YPSLSFDMLHCA-RCGVDWDQK-------DGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 302 ~~~~~d~~~Lp---f~d~sFDlVvss-~~l~~~~~d-------~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.+..++...++ +++++||+|+|. .+++|+ .+ ...++++++++|||||++++..+.
T Consensus 112 ~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 112 VIEEANWLTLDKDVPAGDGFDAVICLGNSFAHL-PDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECCGGGHHHHSCCTTCEEEEEECTTCGGGS-CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eEeecChhhCccccccCCCeEEEEEcChHHhhc-CccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 67777888887 888999999998 676666 55 678999999999999999999874
No 35
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.53 E-value=5.2e-14 Score=131.91 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=86.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC---CcEEEeecccCCCCCCCCeeEEEeccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~---~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
..+|||||||+|.++..+++.+ ..++++|+++.+++.|+++.. ++.+..+|+..++ ++++||+|++..+++|+
T Consensus 52 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 127 (216)
T 3ofk_A 52 VSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYL 127 (216)
T ss_dssp EEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGS
T ss_pred CCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhC
Confidence 3789999999999999999874 589999999999999988742 5678888988888 67899999999886666
Q ss_pred cccH---HHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 331 DQKD---GILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 331 ~~d~---~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
.++ ..++.++.++|||||+++++++..
T Consensus 128 -~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 128 -EDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp -SSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred -CCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 444 478999999999999999988653
No 36
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=4.5e-14 Score=135.69 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=89.5
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
...+|||||||+|.++..+++.. ....++++|+++.|++.++++..++.+..+|++.++ ++++||+|++..+++++ +
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~-~ 109 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWV-P 109 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGS-T
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhC-C
Confidence 34789999999999999998872 235799999999999999988667888889999988 78899999999885554 7
Q ss_pred cHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 333 KDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 333 d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+...+|+++.++|||||++++.++..
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 110 DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 88899999999999999999998754
No 37
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.53 E-value=1.5e-14 Score=135.36 Aligned_cols=132 Identities=18% Similarity=0.205 Sum_probs=99.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccc-c
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-Q 332 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~-~ 332 (474)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++. .+.+..++...++ ++++||+|++..+++++. .
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAG---FDVDATDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CCcEEEECCCCCHHHHHHHHcC---CeEEEECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcCHH
Confidence 3689999999999999999885 47999999999999998873 3445566778888 788999999999877764 2
Q ss_pred cHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhh--HHHHHHHHHHHHHHHhhC-ceEEee
Q 011964 333 KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN--KENQKRWNFVRDFVENLC-WELVSQ 390 (474)
Q Consensus 333 d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~--~e~~~~w~~~~~la~~l~-W~~~~~ 390 (474)
+...+|+++.++|||||++++..+.......... ......-..+..+++..| |+.+..
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 5568999999999999999999775542110000 000112356677888888 987764
No 38
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.53 E-value=8.2e-14 Score=131.01 Aligned_cols=100 Identities=15% Similarity=0.125 Sum_probs=83.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----C------CcEEEeecccCCCCCCCCeeEEEe
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----~------~~~~~~~d~~~Lpf~d~sFDlVvs 323 (474)
..+|||||||+|.++..+++.+ ....++++|+++.+++.|+++. + .+.+..+|+..+++++++||+|+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATV 108 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEE
Confidence 3799999999999999999874 2368999999999999998762 1 577888888888888899999999
Q ss_pred ccccccccccH--HHHHHHHHhhcCCCcEEEEEe
Q 011964 324 ARCGVDWDQKD--GILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 324 s~~l~~~~~d~--~~~L~ei~RvLKPGG~lvis~ 355 (474)
..++.++ .++ ..+++++.++|||||++++..
T Consensus 109 ~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 109 IEVIEHL-DENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp ESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HHHHHhC-CHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 9987776 444 589999999999999666554
No 39
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.53 E-value=3.7e-14 Score=138.38 Aligned_cols=99 Identities=10% Similarity=-0.016 Sum_probs=83.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----------------------CCcEEEeecccCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------------------LPAMIGSFASKQL 311 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----------------------~~~~~~~~d~~~L 311 (474)
..+|||+|||+|..+..|++.|. .|+|+|+|+.|++.|+++. .++.+.++|+..+
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 36899999999999999999874 7999999999999997542 3567888999999
Q ss_pred CCCC-CCeeEEEeccccccccc-cHHHHHHHHHhhcCCCcEEEEEe
Q 011964 312 PYPS-LSFDMLHCARCGVDWDQ-KDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 312 pf~d-~sFDlVvss~~l~~~~~-d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
++++ ++||+|++..+++++.. +...+++++.|+|||||+|++.+
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8865 89999999877666643 34579999999999999997654
No 40
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.53 E-value=9.6e-14 Score=132.13 Aligned_cols=130 Identities=15% Similarity=0.023 Sum_probs=99.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC------CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL------PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~------~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++.. ++.+..+|+..++ ++++||+|++..+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 589999999999999998864 579999999999999987632 3678888888877 456999999998877
Q ss_pred cccc-cHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEee
Q 011964 329 DWDQ-KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 329 ~~~~-d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
++.+ +...+++++.++|||||++++.+.........+. .......+..+.+..+|+.+..
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPP--YKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSS--CCCCHHHHHHHHGGGTEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCC--ccCCHHHHHHHHHHcCCeEEEE
Confidence 6632 5678999999999999999998875532110000 0012345677888889987653
No 41
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.53 E-value=6.4e-14 Score=133.13 Aligned_cols=101 Identities=22% Similarity=0.298 Sum_probs=88.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC--CcEEEeecccCCCCCCCCeeEEEecccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 331 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~ 331 (474)
..+|||||||+|.++..+++.+. ..++++|+++.+++.|+++.. .+.+..++...+++++++||+|++..+++++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~- 120 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV- 120 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC-
T ss_pred CCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc-
Confidence 37899999999999999998853 389999999999999998753 4677888888899989999999999886665
Q ss_pred ccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 332 QKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 332 ~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.+...+|+++.++|||||++++.++.
T Consensus 121 ~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 121 EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 67889999999999999999998864
No 42
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.52 E-value=3.7e-14 Score=135.70 Aligned_cols=134 Identities=13% Similarity=0.111 Sum_probs=101.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC-----CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-----PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~-----~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
..+|||||||+|.++..+++.+ ...++++|+++.+++.|+++.. .+.+...++..+++++++||+|++..+++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 5799999999999999998875 3589999999999999987742 35677888888999888999999998876
Q ss_pred cccccH--HHHHHHHHhhcCCCcEEEEEeCCCCchhhhh--hHHHHHHHHHHHHHHHhhCceEEee
Q 011964 329 DWDQKD--GILLLEVDRVLKPGGYFVWTSPLTNPQAFLR--NKENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 329 ~~~~d~--~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~--~~e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
++ .++ ..+|+++.++|||||++++.++......... ..........+..++++.||+.+..
T Consensus 158 ~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 158 HL-TDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp GS-CHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hC-CHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 66 443 4899999999999999999886443200000 0000112345677788888887654
No 43
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.52 E-value=7.9e-14 Score=134.96 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=86.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecc-cccccc-
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCAR-CGVDWD- 331 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~-~l~~~~- 331 (474)
..+|||||||+|.++..+++.+ ..++++|+++.+++.|+++...+.+..+|+..+++ +++||+|+|.. ++.++.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCH
T ss_pred CCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCC
Confidence 4789999999999999999885 37999999999999999987778888999999888 68999999997 755553
Q ss_pred -ccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 332 -QKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 332 -~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.+...+|+++.++|||||+|++.+.
T Consensus 127 ~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 127 QAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 3456899999999999999999754
No 44
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.52 E-value=7.2e-14 Score=131.38 Aligned_cols=100 Identities=18% Similarity=0.154 Sum_probs=83.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----C------CcEEEeecccCCCCCCCCeeEEEec
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLHCA 324 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----~------~~~~~~~d~~~Lpf~d~sFDlVvss 324 (474)
.+|||||||+|.++..+++.+ ....++++|+++.+++.|+++. + ++.+..+|+..+++++++||+|++.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 799999999999999999874 2358999999999999998762 2 5778888887778888899999999
Q ss_pred cccccccccH--HHHHHHHHhhcCCCcEEEEEeC
Q 011964 325 RCGVDWDQKD--GILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 325 ~~l~~~~~d~--~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.++.++ .++ ..+++++.++|||||+++++..
T Consensus 110 ~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 110 EVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp SCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 987776 444 6899999999999997776653
No 45
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.51 E-value=1.1e-14 Score=150.89 Aligned_cols=133 Identities=17% Similarity=0.176 Sum_probs=101.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEE---EeecccCCCCCCCCeeEEEeccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI---GSFASKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~---~~~d~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
..+|||||||+|.++..+++.+. .++++|+|+.|++.|++++++... ...+.+.+|+++++||+|++..+++|+
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~ 184 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHI 184 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGC
T ss_pred CCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhc
Confidence 47999999999999999998864 899999999999999998765442 234556677888999999999997777
Q ss_pred cccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhh-------hHHHHHHHHHHHHHHHhhCceEEee
Q 011964 331 DQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLR-------NKENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 331 ~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~-------~~e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
+++..+|++++|+|||||++++.++......... ..........+..++++.+|+.+..
T Consensus 185 -~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 185 -PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp -TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred -CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 6889999999999999999999887532100000 0000011256788899999987754
No 46
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.51 E-value=1.1e-13 Score=130.22 Aligned_cols=101 Identities=22% Similarity=0.282 Sum_probs=86.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+|||||||+|.++..+++.+. .++++|+++.+++.|+++ +.++.+..+|+..+++++++||+|++..++++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 47899999999999999998853 899999999999988765 35678888899888988899999999977333
Q ss_pred c-cccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 330 W-DQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 330 ~-~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+ ..+...+++++.++|||||.+++.++.
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 2 245678999999999999999999875
No 47
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.51 E-value=1.1e-13 Score=128.57 Aligned_cols=102 Identities=21% Similarity=0.167 Sum_probs=85.0
Q ss_pred CceEEEECCCCchHH-HHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 254 VRTILDIGCGYGSFG-AHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~-~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
..+|||+|||+|.++ ..++..+ ..++++|+++.+++.|+++ +.++.+..+|+..+++++++||+|++..+++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDG---YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTT---CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 378999999999984 4444444 4899999999999988765 4567788889999999999999999998866
Q ss_pred ccc-ccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 329 DWD-QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 329 ~~~-~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
|+. .+...+++++.++|||||++++.++..
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 663 456789999999999999999998754
No 48
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.50 E-value=4.3e-14 Score=139.89 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=85.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-------CCCcEEEeecccCCCCCC------CCeeE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-------GLPAMIGSFASKQLPYPS------LSFDM 320 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-------g~~~~~~~~d~~~Lpf~d------~sFDl 320 (474)
..+|||||||+|.++..+++.......++++|+|+.+++.|+++ ..++.+..++++.+++++ ++||+
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 116 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDM 116 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeE
Confidence 47999999999999999996311246899999999999999876 446788899999999887 89999
Q ss_pred EEeccccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 321 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 321 Vvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
|++..+++++ +...++.++.++|||||.|++.+
T Consensus 117 V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 117 ITAVECAHWF--DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999885555 88999999999999999999843
No 49
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.50 E-value=4.1e-13 Score=126.73 Aligned_cols=126 Identities=20% Similarity=0.164 Sum_probs=97.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
..+|||||||+|.++..+++. +++|+++.+++.++++ .+.+..++...+++++++||+|++..++.++ ++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFV-DD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGS-SC
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhc-cC
Confidence 368999999999999998764 7899999999999987 5667778888899999999999999886665 77
Q ss_pred HHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhH-----------HHHHHHHHHHHHHHhhCceEEe
Q 011964 334 DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK-----------ENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 334 ~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~-----------e~~~~w~~~~~la~~l~W~~~~ 389 (474)
+..+|+++.++|||||++++.++........... ........+..++++.||+.+.
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 8899999999999999999998765431100000 0001235667777778887655
No 50
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.50 E-value=1.2e-13 Score=136.05 Aligned_cols=102 Identities=17% Similarity=0.224 Sum_probs=88.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+|||||||+|.++..+++.......++++|+++.+++.|+++ +.++.+...|+..++++ ++||+|++..++.+
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 101 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLLH 101 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhhc
Confidence 47999999999999999998732236899999999999988875 33577888899998885 69999999988665
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+ .+...++++++++|||||++++.++.
T Consensus 102 ~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 102 M-TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp C-SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred C-CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 5 78889999999999999999999987
No 51
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.50 E-value=1.4e-13 Score=134.94 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=84.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ +. .+.+...|...+| ++||+|++..++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l 139 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAF 139 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCG
T ss_pred cCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCch
Confidence 3799999999999999998542 24899999999999999876 32 5667778887766 789999999987
Q ss_pred cccc-ccHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 328 VDWD-QKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 328 ~~~~-~d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
+|+. .+...+|+++.|+|||||.+++.++....
T Consensus 140 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 140 EHFGHERYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp GGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred hhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 7775 46788999999999999999999876543
No 52
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.49 E-value=3.4e-14 Score=140.45 Aligned_cols=104 Identities=15% Similarity=0.053 Sum_probs=77.7
Q ss_pred CCceEEEECCCCchHHHHh----hhcCCcee--EEEEecCCHHHHHHHHHc-----CC-Cc--EEEeecccCCC------
Q 011964 253 GVRTILDIGCGYGSFGAHL----FSKELLTM--CIANYEASGSQVQLTLER-----GL-PA--MIGSFASKQLP------ 312 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~L----a~~g~~~~--~v~giD~s~~~l~~A~er-----g~-~~--~~~~~d~~~Lp------ 312 (474)
...+|||||||+|.++..+ +.+. ... .++++|+|+.|++.|+++ ++ ++ .+..++++.++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~-~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQY-PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHS-TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhC-CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 3468999999999766533 3322 123 459999999999988875 22 22 33445554443
Q ss_pred CCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 313 YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 313 f~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+++++||+|++..+++|+ +++..+|++++|+|||||+|++..+..
T Consensus 131 ~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYV-KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGC-SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeec-CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 678999999999986655 888999999999999999999987654
No 53
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.49 E-value=2.2e-13 Score=125.31 Aligned_cols=99 Identities=17% Similarity=0.288 Sum_probs=84.7
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.++++ +. ++.+..+|...+++ +++||+|++..++++
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANG---YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CeEEEEcCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 699999999999999999885 4899999999999988764 44 57788889888888 789999999988666
Q ss_pred cc-ccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 330 WD-QKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 330 ~~-~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+. .+...+++++.++|||||++++.++.
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 63 25678999999999999998887653
No 54
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.48 E-value=4.4e-13 Score=122.25 Aligned_cols=124 Identities=17% Similarity=0.083 Sum_probs=99.1
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEec-ccccccc-
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCA-RCGVDWD- 331 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss-~~l~~~~- 331 (474)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++..++.+...+...+++++++||+|++. .++.++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCH
T ss_pred CCeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcCh
Confidence 3689999999999999999885 4899999999999999988767888888988888888999999998 4534432
Q ss_pred ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEee
Q 011964 332 QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 332 ~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
++...++.++.++|||||++++..+.... .....+..+.+..+|+....
T Consensus 124 ~~~~~~l~~~~~~l~~~G~l~~~~~~~~~----------~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 124 DGREPALANIHRALGADGRAVIGFGAGRG----------WVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEETTSS----------CCHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCCCCC----------cCHHHHHHHHHHcCCEEeee
Confidence 33468999999999999999998765432 11234566777788876653
No 55
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.48 E-value=1.4e-13 Score=128.72 Aligned_cols=99 Identities=20% Similarity=0.234 Sum_probs=83.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC---CCCCC-CeeEEEeccccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL---PYPSL-SFDMLHCARCGVDW 330 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L---pf~d~-sFDlVvss~~l~~~ 330 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ ....+...+...+ ++..+ +||+|++..+++
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRG---IEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CEEEEeCCCCCHHHHHHHHCC---CEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 799999999999999999885 4799999999999999988 4455666665555 55544 599999998866
Q ss_pred cccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 331 DQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 331 ~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
..+...+++++.++|||||++++.++...
T Consensus 128 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 128 HQDIIELLSAMRTLLVPGGALVIQTLHPW 156 (227)
T ss_dssp SSCCHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred hhhHHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 47788999999999999999999997653
No 56
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.48 E-value=2.9e-13 Score=125.50 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=85.6
Q ss_pred eEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEeccccccc-
Q 011964 256 TILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW- 330 (474)
Q Consensus 256 ~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~- 330 (474)
+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ +.++.+..+|+..+++++++||+|+++.+ ++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG---YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC--HLP 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC--CCC
T ss_pred CEEEECCCCCHhHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh--cCC
Confidence 89999999999999999875 4899999999999988766 55778888899889998899999999643 33
Q ss_pred cccHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 331 DQKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 331 ~~d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
..+...++.++.++|||||++++.++....
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 245678999999999999999999876543
No 57
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.48 E-value=1.8e-13 Score=127.11 Aligned_cols=103 Identities=24% Similarity=0.297 Sum_probs=87.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCCCCCCCeeEEEeccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
..+|||||||+|.++..+++.+. ..++++|+++.+++.|+++. ..+.+..+|+..+++++++||+|++..++.++
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhh
Confidence 46899999999999999998864 27999999999999998874 35778888988899999999999998765433
Q ss_pred c--------------ccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 331 D--------------QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 331 ~--------------~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
. .+...++.++.++|||||.+++.++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 2 244689999999999999999999754
No 58
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.48 E-value=2.7e-13 Score=128.58 Aligned_cols=117 Identities=21% Similarity=0.236 Sum_probs=93.0
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEee
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSF 306 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~ 306 (474)
..+.+.+.+.+..... ...+|||||||+|.++..+++.+ ..++++|+++.|++.|+++ +..+.+..+
T Consensus 21 ~~~~~~~~~~l~~~~~------~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~ 91 (246)
T 1y8c_A 21 KKWSDFIIEKCVENNL------VFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ 91 (246)
T ss_dssp HHHHHHHHHHHHTTTC------CTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEECC
T ss_pred HHHHHHHHHHHHHhCC------CCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcCCCeEEEec
Confidence 3444555555543211 34789999999999999999885 4799999999999988865 346788888
Q ss_pred cccCCCCCCCCeeEEEecc-cccccc--ccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 307 ASKQLPYPSLSFDMLHCAR-CGVDWD--QKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 307 d~~~Lpf~d~sFDlVvss~-~l~~~~--~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
++..++++ ++||+|++.. +++|+. .+...+|+++.++|||||++++..+.
T Consensus 92 d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 92 DISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp CGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred ccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 99888887 7999999997 766663 45578999999999999999997764
No 59
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.47 E-value=8.4e-14 Score=134.00 Aligned_cols=99 Identities=14% Similarity=0.090 Sum_probs=78.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCC--CCCCCCeeEEEec---
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL--PYPSLSFDMLHCA--- 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~L--pf~d~sFDlVvss--- 324 (474)
..+|||||||+|..+..+++.. ..+++++|+++.+++.|+++ +..+.+..++++.+ ++++++||.|+.-
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 3799999999999999998874 35799999999999999875 34456666665543 5889999999752
Q ss_pred --cccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 325 --RCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 325 --~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
...+|. .+...++.++.|+|||||+|++.+
T Consensus 139 ~~~~~~~~-~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 139 LSEETWHT-HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTT-HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccchhhh-cchhhhhhhhhheeCCCCEEEEEe
Confidence 232333 567789999999999999999865
No 60
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.47 E-value=3.3e-13 Score=133.65 Aligned_cols=101 Identities=14% Similarity=0.160 Sum_probs=84.1
Q ss_pred CceEEEECCCCchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
..+|||||||+|.++..+++. + ..++++|+|+.+++.|+++ ++ .+.+..+|...+ +++||+|++..+
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~ 146 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGA 146 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESC
T ss_pred cCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcch
Confidence 379999999999999999987 4 5799999999999998876 44 366777887766 789999999988
Q ss_pred cccccc--------cHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 327 GVDWDQ--------KDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 327 l~~~~~--------d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
++|+.+ +...+++++.++|||||++++.++....
T Consensus 147 ~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 147 FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 777622 1268999999999999999999876543
No 61
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.47 E-value=2.7e-13 Score=134.75 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=85.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----CC--cEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----~~--~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..++........++++|+++.+++.|+++. +. +.+..+|+..++++ ++||+|++..++
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~ 197 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLN 197 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSG
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChh
Confidence 478999999999999999633334568999999999999998762 22 67888999999988 899999999886
Q ss_pred ccccccHH---HHHHHHHhhcCCCcEEEEEeCCC
Q 011964 328 VDWDQKDG---ILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 328 ~~~~~d~~---~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+++ +++. .+++++.++|||||++++++...
T Consensus 198 ~~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 198 IYE-PDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp GGC-CCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred hhc-CCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 666 4444 47999999999999999998654
No 62
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.46 E-value=7.9e-14 Score=133.28 Aligned_cols=101 Identities=15% Similarity=0.152 Sum_probs=81.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----CCcEEEeecccCC--CCCCCCeeEEEe-ccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSFASKQL--PYPSLSFDMLHC-ARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----~~~~~~~~d~~~L--pf~d~sFDlVvs-s~~ 326 (474)
..+|||||||+|.++..+++.+. ..++++|+|+.|++.|+++. .++.+..+++..+ |+++++||+|++ .+.
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 36899999999999999977642 48999999999999998763 4567788888888 899999999999 544
Q ss_pred cc-c-c-cccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 327 GV-D-W-DQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 327 l~-~-~-~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+. + + ..+.+.++++++|+|||||+|++.+.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 21 1 1 12234789999999999999998764
No 63
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.46 E-value=3e-13 Score=128.11 Aligned_cols=101 Identities=18% Similarity=0.159 Sum_probs=85.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecc-cccccc-
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCAR-CGVDWD- 331 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~-~l~~~~- 331 (474)
..+|||||||+|.++..+++.+. .++++|+++.+++.|+++..++.+..+|+..+++ +++||+|+|.. +++|+.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 47899999999999999998853 7999999999999999887678888889888887 67999999765 544442
Q ss_pred -ccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 332 -QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 332 -~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
.+...+|+++.++|||||.+++.++..
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 344689999999999999999987654
No 64
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.46 E-value=5.8e-13 Score=124.83 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=85.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccC--CCCCCCCeeEEEecccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ--LPYPSLSFDMLHCARCGVDWD 331 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~--Lpf~d~sFDlVvss~~l~~~~ 331 (474)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++.. .+...++.. +++++++||+|++..+++|+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~- 106 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLEHL- 106 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGGGS-
T ss_pred CCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhhhc-
Confidence 4799999999999999999884 589999999999999987653 456667665 67888999999999886666
Q ss_pred ccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 332 QKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 332 ~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
.++..++.++.++|||||+++++++...
T Consensus 107 ~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 107 FDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp SCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 6778999999999999999999987653
No 65
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.46 E-value=4.3e-13 Score=122.75 Aligned_cols=102 Identities=13% Similarity=0.050 Sum_probs=77.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC-CCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP-YPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lp-f~d~sFDlVvss~~l 327 (474)
..+|||+|||+|.++..+++.+ ..|+++|+++.|++.|+++ ++ ++.+...+...++ +.+++||+|+++...
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~---~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLS---KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCEEEEEcCCCCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 4789999999999999999873 6899999999999998765 43 4666666666653 557899999987432
Q ss_pred ccc--------cccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 328 VDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 328 ~~~--------~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
++. ..+...++.++.++|||||.+++.....
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 221 1333578999999999999999987643
No 66
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.44 E-value=7.2e-13 Score=129.89 Aligned_cols=99 Identities=13% Similarity=0.236 Sum_probs=84.5
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEeccccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ ++++.+..+|+..+++ +++||+|++..+++++
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 789999999999999999985 3899999999999888765 5578888889988887 7899999999886666
Q ss_pred c-ccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 331 D-QKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 331 ~-~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
. ++...+++++.++|||||++++....
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 3 33458999999999999998876643
No 67
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.44 E-value=3.1e-12 Score=116.49 Aligned_cols=130 Identities=17% Similarity=0.214 Sum_probs=96.1
Q ss_pred hhccccccccccc--hhhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHH
Q 011964 217 QISFRSASLIFDG--VEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLT 294 (474)
Q Consensus 217 ~~~F~~~~~~yd~--~~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A 294 (474)
.+.|......|.. .....+.+.+.+...++ .+|||+|||+|.++..+++.+ ..++++|+++.+++.|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~vLdiG~G~G~~~~~~~~~~---~~v~~~D~~~~~~~~a 90 (194)
T 1dus_A 22 KLKFKTDSGVFSYGKVDKGTKILVENVVVDKD--------DDILDLGCGYGVIGIALADEV---KSTTMADINRRAIKLA 90 (194)
T ss_dssp EEEEEEETTSTTTTSCCHHHHHHHHHCCCCTT--------CEEEEETCTTSHHHHHHGGGS---SEEEEEESCHHHHHHH
T ss_pred ceEEEeCCCcCCccccchHHHHHHHHcccCCC--------CeEEEeCCCCCHHHHHHHHcC---CeEEEEECCHHHHHHH
Confidence 3345444445522 23455566666654433 789999999999999999873 5899999999999988
Q ss_pred HHc----CCC---cEEEeecccCCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 295 LER----GLP---AMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 295 ~er----g~~---~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+++ ++. +.+...+... ++++++||+|++...+++...+...+++++.++|||||.+++.++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 91 KENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred HHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 865 443 6777777665 45577999999987644323455789999999999999999998754
No 68
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.44 E-value=1.9e-13 Score=136.76 Aligned_cols=102 Identities=13% Similarity=0.084 Sum_probs=77.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC-------cEEEeecc------cCC--CCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-------AMIGSFAS------KQL--PYP 314 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~-------~~~~~~d~------~~L--pf~ 314 (474)
..+|||||||+|..+..++..+. ..|+|+|+|+.|++.|+++ +.. +.+.+.++ +.+ +++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~--~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEI--ALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcCC--CeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 47899999999987766665543 5799999999999999876 222 33445544 323 467
Q ss_pred CCCeeEEEeccccccc-c-ccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 315 SLSFDMLHCARCGVDW-D-QKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 315 d~sFDlVvss~~l~~~-~-~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+++||+|+|..++++. . .+...+|+++.|+|||||+|+++++.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999999875442 1 34578999999999999999999875
No 69
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.44 E-value=3.5e-13 Score=133.29 Aligned_cols=102 Identities=15% Similarity=0.183 Sum_probs=86.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----C----CCcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G----LPAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g----~~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ + .++.+..+|+..+++ +++||+|+++..
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 489999999999999999885 4799999999999999876 2 457888999999988 679999998755
Q ss_pred cccccc--cHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 327 GVDWDQ--KDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 327 l~~~~~--d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
.+++.. +...+|+++.++|||||+|++.++....
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 566544 3468999999999999999999987643
No 70
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.43 E-value=1e-13 Score=135.15 Aligned_cols=135 Identities=15% Similarity=0.026 Sum_probs=92.8
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC------C---------------------------
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------L--------------------------- 299 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg------~--------------------------- 299 (474)
...+|||||||+|.++..++..+. .+|+++|+|+.|++.|+++. +
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 347899999999998887777653 47999999999999887631 0
Q ss_pred -Cc-EEEeecccC-CCC---CCCCeeEEEecccccccc---ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhh-hh--hH
Q 011964 300 -PA-MIGSFASKQ-LPY---PSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAF-LR--NK 367 (474)
Q Consensus 300 -~~-~~~~~d~~~-Lpf---~d~sFDlVvss~~l~~~~---~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~-~~--~~ 367 (474)
.+ .+..+|+.. .|+ ..++||+|+++.++++.. ++...++++++|+|||||+|++++........ .. ..
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 01 156667666 344 367999999999977653 34468999999999999999999754321100 00 00
Q ss_pred HHHHHHHHHHHHHHhhCceEEe
Q 011964 368 ENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 368 e~~~~w~~~~~la~~l~W~~~~ 389 (474)
...-.-+.+....++.||+.+.
T Consensus 213 ~~~~~~~~l~~~l~~aGF~i~~ 234 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFDIEQ 234 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEEE
Confidence 0000123567777888887665
No 71
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.43 E-value=1e-12 Score=127.55 Aligned_cols=104 Identities=15% Similarity=0.120 Sum_probs=82.5
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHH------HHHHHHHc----CC--CcEEEeec---ccCCCCCCCCee
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGS------QVQLTLER----GL--PAMIGSFA---SKQLPYPSLSFD 319 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~------~l~~A~er----g~--~~~~~~~d---~~~Lpf~d~sFD 319 (474)
.+|||||||+|.++..+++.......++++|+++. +++.|+++ ++ ++.+..+| ...+|+++++||
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 124 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFD 124 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEE
Confidence 79999999999999999987312358999999987 88888765 22 46677776 556778889999
Q ss_pred EEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 320 MLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 320 lVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
+|++..+++|+ .++..+++.+.++++|||++++.+....
T Consensus 125 ~v~~~~~l~~~-~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 125 RVVLAHSLWYF-ASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp EEEEESCGGGS-SCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred EEEEccchhhC-CCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 99999887666 6666677777777778999999987653
No 72
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.42 E-value=4.4e-12 Score=118.11 Aligned_cols=118 Identities=15% Similarity=0.057 Sum_probs=91.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.+|||||||+|.++..+++.+ ....++++|+++.+++.|+++ ++ ++.+...+........++||+|++..+..
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~- 119 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG- 119 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT-
T ss_pred CEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc-
Confidence 799999999999999999884 346899999999999998765 43 46677777755444446899999886532
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
+...++.++.++|||||.+++..+.. .....+..+.++.+|+...
T Consensus 120 ---~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 120 ---MLEEIIDAVDRRLKSEGVIVLNAVTL------------DTLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp ---CHHHHHHHHHHHCCTTCEEEEEECBH------------HHHHHHHHHHHHTTCEEEE
T ss_pred ---CHHHHHHHHHHhcCCCeEEEEEeccc------------ccHHHHHHHHHHCCCceeE
Confidence 56789999999999999999987632 1244556677778884333
No 73
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.42 E-value=3.4e-13 Score=132.77 Aligned_cols=135 Identities=17% Similarity=0.078 Sum_probs=89.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCC---------------------------------
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLP--------------------------------- 300 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~--------------------------------- 300 (474)
..+|||||||+|.+...++... ...|+++|+|+.|++.|+++...
T Consensus 72 ~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 4789999999999554444432 25899999999999988763100
Q ss_pred --cEEEeecccC-CCC-----CCCCeeEEEeccccccc---cccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhH--
Q 011964 301 --AMIGSFASKQ-LPY-----PSLSFDMLHCARCGVDW---DQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK-- 367 (474)
Q Consensus 301 --~~~~~~d~~~-Lpf-----~d~sFDlVvss~~l~~~---~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~-- 367 (474)
..+..+|+.. +|+ ++++||+|+|+.++++. .++...+|+++.|+|||||+|++.+............
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 2344557766 664 45679999999886653 2457799999999999999999985322110000000
Q ss_pred -HHHHHHHHHHHHHHhhCceEEee
Q 011964 368 -ENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 368 -e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
.....-..+..+++..+|+.+..
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEe
Confidence 00011245677778888887653
No 74
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.42 E-value=8e-13 Score=125.48 Aligned_cols=98 Identities=17% Similarity=0.213 Sum_probs=82.5
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecc-cccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCAR-CGVD 329 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~-~l~~ 329 (474)
.+|||||||+|.++..+++. ..++++|+++.+++.|+++ +.++.+...++..++++ ++||+|++.. ++.+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNY 109 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhh
Confidence 68999999999999999876 4899999999999998865 45678888888888877 7899999986 6555
Q ss_pred cc--ccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 330 WD--QKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 330 ~~--~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+. .+...+++++.++|||||.+++..+.
T Consensus 110 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 110 LQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp CCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 42 34468999999999999999997753
No 75
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.41 E-value=1.1e-12 Score=121.03 Aligned_cols=123 Identities=14% Similarity=0.117 Sum_probs=91.4
Q ss_pred hhhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEE
Q 011964 230 VEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIG 304 (474)
Q Consensus 230 ~~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~ 304 (474)
.....+.+.+.+..... ....+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++ ++ ++.+.
T Consensus 26 ~~~~~~~l~~~l~~~~~-----~~~~~vLDlgcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~ 98 (189)
T 3p9n_A 26 TDRVRESLFNIVTARRD-----LTGLAVLDLYAGSGALGLEALSRGA--ASVLFVESDQRSAAVIARNIEALGLSGATLR 98 (189)
T ss_dssp CHHHHHHHHHHHHHHSC-----CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEECCHHHHHHHHHHHHHHTCSCEEEE
T ss_pred cHHHHHHHHHHHHhccC-----CCCCEEEEeCCCcCHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 34455555555543100 1347899999999999998887753 5799999999999988765 44 56788
Q ss_pred eecccCCC--CCCCCeeEEEeccccccccccHHHHHHHHHh--hcCCCcEEEEEeCCCC
Q 011964 305 SFASKQLP--YPSLSFDMLHCARCGVDWDQKDGILLLEVDR--VLKPGGYFVWTSPLTN 359 (474)
Q Consensus 305 ~~d~~~Lp--f~d~sFDlVvss~~l~~~~~d~~~~L~ei~R--vLKPGG~lvis~~~~~ 359 (474)
.+|+..++ +++++||+|++....++...+...++.++.+ +|||||++++..+...
T Consensus 99 ~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 99 RGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp ESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred EccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 88877664 5578999999986633323566789999999 9999999999876543
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.41 E-value=9.3e-13 Score=131.23 Aligned_cols=101 Identities=13% Similarity=0.152 Sum_probs=85.6
Q ss_pred CceEEEECCCCchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
..+|||||||+|.++..+++. + ..++++|+++.+++.|+++ ++ .+.+...|...+| ++||+|++..+
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~ 164 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFD---VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEA 164 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred cCEEEEEcccchHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeCh
Confidence 478999999999999999987 4 4899999999999999876 33 3677778887775 78999999998
Q ss_pred ccccc-ccHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 327 GVDWD-QKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 327 l~~~~-~d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
++|+. .+...+++++.++|||||.+++.++....
T Consensus 165 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 165 FEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp GGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 77764 46789999999999999999999987654
No 77
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.41 E-value=1.5e-12 Score=124.75 Aligned_cols=100 Identities=20% Similarity=0.301 Sum_probs=82.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+|||||||+|.++..+++.+ ..++++|+|+.|++.|+++ +.++.+..+|+..++++ ++||+|+|..+.++
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERG---YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIM 117 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchh
Confidence 4789999999999999999885 4799999999999988765 55788888898888876 68999998754343
Q ss_pred cc--ccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 330 WD--QKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 330 ~~--~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+. .+...+++++.++|||||.+++..+.
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 32 34568999999999999999987764
No 78
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.40 E-value=8.2e-13 Score=129.26 Aligned_cols=102 Identities=20% Similarity=0.213 Sum_probs=85.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCC-CCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPY-PSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf-~d~sFDlVvss~~ 326 (474)
..+|||||||+|.++..+++.+. ..++++|+++.+++.|+++ +. ++.+..+|+..+|+ ++++||+|++..+
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 47899999999999999888752 4899999999999998876 22 35778888888888 6889999999988
Q ss_pred cccc---cccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 327 GVDW---DQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 327 l~~~---~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+++. ..+...+|+++.++|||||++++.++.
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 6542 345578999999999999999999875
No 79
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.39 E-value=2e-12 Score=122.75 Aligned_cols=115 Identities=19% Similarity=0.350 Sum_probs=91.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc-cCCCCC-CCCeeEEEecccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS-KQLPYP-SLSFDMLHCARCGVDWD 331 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~-~~Lpf~-d~sFDlVvss~~l~~~~ 331 (474)
..+|||||||+|.++..+++.+ ..++++|+++.+++.|+++..++.+..+|. +.+|++ +++||+|++.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------- 118 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------- 118 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------
T ss_pred CCeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------
Confidence 3789999999999999999885 489999999999999999877788888888 678888 8999999987
Q ss_pred ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEeee
Q 011964 332 QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 391 (474)
Q Consensus 332 ~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~~ 391 (474)
.+...+++++.++|||||.++....... ...+....+..+|..+...
T Consensus 119 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 119 RGPTSVILRLPELAAPDAHFLYVGPRLN-------------VPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp SCCSGGGGGHHHHEEEEEEEEEEESSSC-------------CTHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCcEEEEeCCcCC-------------HHHHHHHHHHCCCeEEEEE
Confidence 2445689999999999999993222111 1234556677788766543
No 80
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.39 E-value=6.8e-13 Score=127.66 Aligned_cols=136 Identities=18% Similarity=0.172 Sum_probs=96.8
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC--C------------------------------
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--P------------------------------ 300 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~--~------------------------------ 300 (474)
...+|||||||+|.++..+++.+. ..++++|+|+.|++.|+++.. .
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 347899999999999999988753 589999999999999876521 1
Q ss_pred --c-EEEeecccCCC-CCC---CCeeEEEecccccccc---ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhh---H
Q 011964 301 --A-MIGSFASKQLP-YPS---LSFDMLHCARCGVDWD---QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN---K 367 (474)
Q Consensus 301 --~-~~~~~d~~~Lp-f~d---~sFDlVvss~~l~~~~---~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~---~ 367 (474)
+ .+..+|+...+ +++ ++||+|++..++++.. .+...+|.++.++|||||+|++.+........... .
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~ 213 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFS 213 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccc
Confidence 4 67777877754 355 8999999998866332 35678999999999999999998854321100000 0
Q ss_pred HHHHHHHHHHHHHHhhCceEEee
Q 011964 368 ENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 368 e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
.....-+.+..+++..||+.+..
T Consensus 214 ~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 214 SLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEEEE
Confidence 00011235667778888887653
No 81
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.39 E-value=3.3e-12 Score=115.41 Aligned_cols=96 Identities=17% Similarity=0.149 Sum_probs=75.5
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecc-cCCCCCCCCeeEEEecccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFAS-KQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~-~~Lpf~d~sFDlVvss~~l 327 (474)
.+|||||||+|.++..+++.. ....++++|+++.+++.|+++ +.. + +...+. +.++..+++||+|++..++
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCcc
Confidence 799999999999999998873 347899999999999998865 443 4 555554 2333333799999998774
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.+ ..+++++.++|||||++++.+..
T Consensus 105 ~~-----~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 105 TA-----PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp TC-----TTHHHHHHHTCCTTCEEEEEECS
T ss_pred cH-----HHHHHHHHHhcCCCCEEEEEeec
Confidence 43 55999999999999999998864
No 82
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.39 E-value=1.2e-12 Score=128.53 Aligned_cols=113 Identities=10% Similarity=-0.005 Sum_probs=85.1
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL 311 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L 311 (474)
...+.+.+.+...++ .+|||||||+|.++..|++++ ..|+++|+|+.|++.|+++.... +...+...+
T Consensus 32 ~~~~~il~~l~l~~g--------~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~ 99 (261)
T 3iv6_A 32 SDRENDIFLENIVPG--------STVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADR-CVTIDLLDI 99 (261)
T ss_dssp CHHHHHHHTTTCCTT--------CEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSS-CCEEEECCT
T ss_pred HHHHHHHHhcCCCCc--------CEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhc-cceeeeeec
Confidence 344455555554443 799999999999999999986 47999999999999999874322 223344444
Q ss_pred CC-----CCCCeeEEEecccccccc-ccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 312 PY-----PSLSFDMLHCARCGVDWD-QKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 312 pf-----~d~sFDlVvss~~l~~~~-~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+. .+++||+|+++.+++|+. .+...++.++.++| |||.++++...
T Consensus 100 ~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 100 TAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp TSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 33 256899999998877764 34457999999999 99999999764
No 83
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=6.2e-12 Score=113.57 Aligned_cols=140 Identities=11% Similarity=0.129 Sum_probs=102.5
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEe
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGS 305 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~ 305 (474)
......+.+.+...++ .+|||+|||+|.++..+++. ...++++|+++.+++.|+++ ++ ++.+..
T Consensus 21 ~~~~~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 89 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKD--------DVVVDVGCGSGGMTVEIAKR---CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIK 89 (183)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEESCCCSHHHHHHHTT---SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHHcCCCCC--------CEEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3444555555544333 68999999999999999883 36899999999999988865 33 467777
Q ss_pred ecccCCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCc
Q 011964 306 FASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCW 385 (474)
Q Consensus 306 ~d~~~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W 385 (474)
.|... ++++++||+|++..+ .+...++.++.++ |||.+++.++... ....+....+..+|
T Consensus 90 ~d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~~------------~~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 90 GRAED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVLE------------NAAKIINEFESRGY 149 (183)
T ss_dssp SCHHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCHH------------HHHHHHHHHHHTTC
T ss_pred CCccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEecccc------------cHHHHHHHHHHcCC
Confidence 77766 677789999999876 5567899999999 9999999986421 23345566677778
Q ss_pred eEEeeecceeEEeecC
Q 011964 386 ELVSQQDETVVWKKTS 401 (474)
Q Consensus 386 ~~~~~~~~~~iw~k~~ 401 (474)
+....+....-+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~ 165 (183)
T 2yxd_A 150 NVDAVNVFISYAKKIP 165 (183)
T ss_dssp EEEEEEEEEEEEEEET
T ss_pred eEEEEEeeeehhhccC
Confidence 7766554444444433
No 84
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.38 E-value=1.1e-12 Score=127.25 Aligned_cols=97 Identities=23% Similarity=0.362 Sum_probs=84.1
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
..+|||||||+|.++..+++.. ....++++|+++.+++.|+++...+.+...+...+|+++++||+|++..+.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~------ 158 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP------ 158 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC------
T ss_pred CCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh------
Confidence 4789999999999999998862 235899999999999999998877888888999999999999999987541
Q ss_pred HHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 334 DGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 334 ~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
.++.++.|+|||||.+++.++...
T Consensus 159 --~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 159 --CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp --CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred --hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 258999999999999999998654
No 85
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.38 E-value=1.2e-12 Score=130.39 Aligned_cols=101 Identities=23% Similarity=0.365 Sum_probs=82.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC------------CCcEEEeecccCCC----CC--C
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------------LPAMIGSFASKQLP----YP--S 315 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg------------~~~~~~~~d~~~Lp----f~--d 315 (474)
..+|||||||+|.++..+++.+ ...++++|+++.|++.|+++. .++.+..+|+..++ ++ +
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 4689999999999999998763 368999999999999888652 14667888888876 64 4
Q ss_pred CCeeEEEecccccccc-c---cHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 316 LSFDMLHCARCGVDWD-Q---KDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 316 ~sFDlVvss~~l~~~~-~---d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
++||+|+|..+ +||. . +...+|.++.++|||||+|+++.+.
T Consensus 113 ~~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFV-CHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETC-GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecc-hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 59999999987 4443 2 3458999999999999999999875
No 86
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.37 E-value=3.8e-12 Score=119.75 Aligned_cols=122 Identities=13% Similarity=0.189 Sum_probs=92.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC--CCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lp--f~d~sFDlVvss~~ 326 (474)
..+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++ ++.+..+|+..++ +++++||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 3689999999999999998874 246899999999999988764 44 5778888888877 78889999999865
Q ss_pred cccccc--------cHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 327 GVDWDQ--------KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 327 l~~~~~--------d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
.+|.. ....++.++.++|||||.+++..... .....+.+..+..+|....
T Consensus 121 -~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 121 -DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR------------GLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH------------HHHHHHHHHHHHHTCEEEE
T ss_pred -CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH------------HHHHHHHHHHHHCCCeeee
Confidence 33322 12579999999999999999976421 1124455556666787654
No 87
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.37 E-value=1.1e-12 Score=130.05 Aligned_cols=104 Identities=14% Similarity=0.150 Sum_probs=82.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC-----------------------------------
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------------------------------- 298 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----------------------------------- 298 (474)
..+|||||||+|.++..+++.. ....|+++|+++.|++.|+++.
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4789999999999999999872 2368999999999999998762
Q ss_pred ----------------------------CCcEEEeecccCCC-----CCCCCeeEEEecccccccc-----ccHHHHHHH
Q 011964 299 ----------------------------LPAMIGSFASKQLP-----YPSLSFDMLHCARCGVDWD-----QKDGILLLE 340 (474)
Q Consensus 299 ----------------------------~~~~~~~~d~~~Lp-----f~d~sFDlVvss~~l~~~~-----~d~~~~L~e 340 (474)
.++.+..+|....+ +.+++||+|+|..++.+++ .+...+|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 13556666665443 6788999999998753331 245689999
Q ss_pred HHhhcCCCcEEEEEeCCC
Q 011964 341 VDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 341 i~RvLKPGG~lvis~~~~ 358 (474)
++++|||||+|++....+
T Consensus 206 ~~~~LkpGG~lil~~~~~ 223 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPW 223 (292)
T ss_dssp HHHHEEEEEEEEEECCCH
T ss_pred HHHHhCCCcEEEEecCCc
Confidence 999999999999976544
No 88
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=7.3e-13 Score=126.62 Aligned_cols=103 Identities=12% Similarity=0.032 Sum_probs=84.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC--CcEEEeecccCCCCCC-----CCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--PAMIGSFASKQLPYPS-----LSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~--~~~~~~~d~~~Lpf~d-----~sFDlVvss~~ 326 (474)
..+|||||||+|.++..+++.+. .++++|+++.|++.|+++.. ++.+..+|+..+++.. ..||+|++..+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 46899999999999999998864 79999999999999988743 5677888877765432 24999999988
Q ss_pred cccccc-cHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 327 GVDWDQ-KDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 327 l~~~~~-d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
++++.. +...+++++.++|||||++++.++...
T Consensus 134 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 666532 567999999999999999999988654
No 89
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.37 E-value=7.8e-12 Score=117.53 Aligned_cols=114 Identities=14% Similarity=0.075 Sum_probs=86.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ +++ +.+..+|+.........||+|++....
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~- 132 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAG---GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG- 132 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC-
T ss_pred CEEEEecCCCCHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc-
Confidence 789999999999999999883 5899999999999988765 443 777888877733333579999987532
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
+.. ++.++.++|||||++++..... .....+..+.++.+++...
T Consensus 133 ----~~~-~l~~~~~~LkpgG~lv~~~~~~------------~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 133 ----SQA-LYDRLWEWLAPGTRIVANAVTL------------ESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp ----CHH-HHHHHHHHSCTTCEEEEEECSH------------HHHHHHHHHHHHHCSEEEE
T ss_pred ----cHH-HHHHHHHhcCCCcEEEEEecCc------------ccHHHHHHHHHhCCCcEEE
Confidence 456 9999999999999999988642 1233444555666665543
No 90
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.36 E-value=3.6e-12 Score=120.58 Aligned_cols=100 Identities=13% Similarity=0.211 Sum_probs=81.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC--CCCCCeeEEEecccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lp--f~d~sFDlVvss~~l 327 (474)
.+|||||||+|.++..+++.. ....++|+|+++.+++.|+++ ++ ++.+..+|+..++ +++++||.|++.+.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~- 117 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS- 117 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC-
T ss_pred ceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC-
Confidence 689999999999999999873 346899999999999988764 44 5778888888776 78899999987654
Q ss_pred cccccc--------HHHHHHHHHhhcCCCcEEEEEeC
Q 011964 328 VDWDQK--------DGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 328 ~~~~~d--------~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
..|... ...++.++.++|||||.|++.+.
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 333221 25799999999999999999874
No 91
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.36 E-value=6.6e-12 Score=114.07 Aligned_cols=129 Identities=16% Similarity=0.197 Sum_probs=94.0
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEe
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGS 305 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~ 305 (474)
.....+.+.+...++ .+|||+|||+|.++..+++.+ ..++++|+++.+++.++++ +. .+.+..
T Consensus 20 ~~~~~~~~~~~~~~~--------~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~ 88 (192)
T 1l3i_A 20 EVRCLIMCLAEPGKN--------DVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME 88 (192)
T ss_dssp HHHHHHHHHHCCCTT--------CEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE
T ss_pred HHHHHHHHhcCCCCC--------CEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEe
Confidence 334445555544433 799999999999999999875 5899999999999988764 33 456666
Q ss_pred ecccCCCCCC-CCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhC
Q 011964 306 FASKQLPYPS-LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLC 384 (474)
Q Consensus 306 ~d~~~Lpf~d-~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~ 384 (474)
.+... ++++ ++||+|++..++. +...++.++.++|+|||.+++..+.. .....+..+.++.+
T Consensus 89 ~d~~~-~~~~~~~~D~v~~~~~~~----~~~~~l~~~~~~l~~gG~l~~~~~~~------------~~~~~~~~~l~~~g 151 (192)
T 1l3i_A 89 GDAPE-ALCKIPDIDIAVVGGSGG----ELQEILRIIKDKLKPGGRIIVTAILL------------ETKFEAMECLRDLG 151 (192)
T ss_dssp SCHHH-HHTTSCCEEEEEESCCTT----CHHHHHHHHHHTEEEEEEEEEEECBH------------HHHHHHHHHHHHTT
T ss_pred cCHHH-hcccCCCCCEEEECCchH----HHHHHHHHHHHhcCCCcEEEEEecCc------------chHHHHHHHHHHCC
Confidence 66655 3333 5899999886533 34789999999999999999988632 12344556667777
Q ss_pred ceEE
Q 011964 385 WELV 388 (474)
Q Consensus 385 W~~~ 388 (474)
|+..
T Consensus 152 ~~~~ 155 (192)
T 1l3i_A 152 FDVN 155 (192)
T ss_dssp CCCE
T ss_pred CceE
Confidence 7443
No 92
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.36 E-value=4.4e-12 Score=118.05 Aligned_cols=116 Identities=12% Similarity=0.089 Sum_probs=90.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC-cEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~-~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
..+|||||||+|.++..+++.+. ..++++|+++.+++.|+++ +.. +.+...|... +.+++||+|++.....
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANILAE 136 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCcHH
Confidence 37899999999999999988743 5899999999999988875 443 6777777654 4568999999986533
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
+ ...++.++.++|||||+++++++... ....+..+.+..+|+.+.
T Consensus 137 ~----~~~~l~~~~~~L~~gG~l~~~~~~~~------------~~~~~~~~~~~~Gf~~~~ 181 (205)
T 3grz_A 137 I----LLDLIPQLDSHLNEDGQVIFSGIDYL------------QLPKIEQALAENSFQIDL 181 (205)
T ss_dssp H----HHHHGGGSGGGEEEEEEEEEEEEEGG------------GHHHHHHHHHHTTEEEEE
T ss_pred H----HHHHHHHHHHhcCCCCEEEEEecCcc------------cHHHHHHHHHHcCCceEE
Confidence 2 36789999999999999999875432 134456677778888765
No 93
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.36 E-value=1.5e-12 Score=121.98 Aligned_cols=109 Identities=19% Similarity=0.209 Sum_probs=87.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
..+|||||||+|.++..++ ..++++|+++. .+.+..+++..+|+++++||+|++..++ |+ .+
T Consensus 68 ~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~~ 129 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR------NPVHCFDLASL----------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG-TN 129 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-SC
T ss_pred CCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------CceEEEeccccCCCCCCCEeEEEEehhc-cc-cC
Confidence 3689999999999998884 36889999986 4556777888899999999999999885 45 77
Q ss_pred HHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEee
Q 011964 334 DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 334 ~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
...++.++.++|||||++++.++.... .....+..+++..+|+.+..
T Consensus 130 ~~~~l~~~~~~L~~gG~l~i~~~~~~~----------~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 130 IRDFLEEANRVLKPGGLLKVAEVSSRF----------EDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECGGGC----------SCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCCCC----------CCHHHHHHHHHHCCCEEEEE
Confidence 889999999999999999999864321 02345567788889987664
No 94
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.36 E-value=3.2e-12 Score=127.58 Aligned_cols=97 Identities=15% Similarity=0.157 Sum_probs=78.2
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
.+.+|||||||+|.++..++.+. ....|+++|++++|++.|+++ ++ ++.+..+|+..+| +++||+|++...
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~- 197 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL- 197 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT-
T ss_pred CcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC-
Confidence 34899999999998775543331 246899999999999999876 54 5678888888765 789999997643
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.++...++.++.|+|||||.|++.+.
T Consensus 198 ---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 ---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 36778999999999999999999874
No 95
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.36 E-value=7.8e-12 Score=113.99 Aligned_cols=114 Identities=11% Similarity=-0.021 Sum_probs=87.9
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc--
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ-- 332 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~-- 332 (474)
.+|||+|||+|.++..+++.+ .++++|+++.|++. ..++.+..+|+.. ++++++||+|+++..+++..+
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCT
T ss_pred CeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCccc
Confidence 689999999999999999885 89999999999987 3356677778776 677789999999876443211
Q ss_pred ------cHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEee
Q 011964 333 ------KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 333 ------d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
+...++.++.+.| |||.+++..+.... -..+..+.+..+|+....
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~------------~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANR------------PKEVLARLEERGYGTRIL 146 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC------------HHHHHHHHHHTTCEEEEE
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecCCC------------HHHHHHHHHHCCCcEEEE
Confidence 1246889999999 99999998853321 234566777888886553
No 96
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.35 E-value=5e-12 Score=121.26 Aligned_cols=121 Identities=16% Similarity=0.131 Sum_probs=91.0
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCC---CCCeeEEEec
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYP---SLSFDMLHCA 324 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~---d~sFDlVvss 324 (474)
...+|||||||+|.++..++... ....++++|+++.|++.|+++ ++ ++.+..+++++++++ +++||+|++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 34789999999999999998542 235899999999999888764 54 477888888888764 6799999987
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
.+ .+...++.++.++|||||++++....... .....+....+..+|+...
T Consensus 149 ~~-----~~~~~~l~~~~~~LkpgG~l~~~~g~~~~----------~~~~~~~~~l~~~g~~~~~ 198 (240)
T 1xdz_A 149 AV-----ARLSVLSELCLPLVKKNGLFVALKAASAE----------EELNAGKKAITTLGGELEN 198 (240)
T ss_dssp CC-----SCHHHHHHHHGGGEEEEEEEEEEECC-CH----------HHHHHHHHHHHHTTEEEEE
T ss_pred cc-----CCHHHHHHHHHHhcCCCCEEEEEeCCCch----------HHHHHHHHHHHHcCCeEeE
Confidence 52 56788999999999999999987532211 1223445566677876654
No 97
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.35 E-value=5.1e-12 Score=139.97 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=87.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----------C-CCcEEEeecccCCCCCCCCeeEEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------G-LPAMIGSFASKQLPYPSLSFDMLH 322 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----------g-~~~~~~~~d~~~Lpf~d~sFDlVv 322 (474)
..+|||||||+|.++..|++.+.....|+|+|+++.|++.|+++ + .++.+..+|+..+++++++||+|+
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 37999999999999999998853336899999999999999772 2 247788999999999999999999
Q ss_pred eccccccccccHH--HHHHHHHhhcCCCcEEEEEeCCC
Q 011964 323 CARCGVDWDQKDG--ILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 323 ss~~l~~~~~d~~--~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+..+++|+ .++. .++.++.|+|||| .++++++..
T Consensus 802 ~~eVLeHL-~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 802 CLEVIEHM-EEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EESCGGGS-CHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EeCchhhC-ChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99987777 4333 6899999999999 888888754
No 98
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.33 E-value=5.4e-12 Score=116.55 Aligned_cols=104 Identities=14% Similarity=0.098 Sum_probs=81.9
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCC-CCCCCeeEEEecccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lp-f~d~sFDlVvss~~l 327 (474)
.+|||+|||+|.++..+++.......++++|+++.+++.|+++ ++ ++.+..+|+..++ +.+++||+|++....
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGY 103 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESB
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCc
Confidence 6899999999999999988621124899999999999998766 33 5778888887776 667899999988653
Q ss_pred ccc--------cccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 328 VDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 328 ~~~--------~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+.. ..+...++.++.++|||||++++.....
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 104 LPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 221 1133579999999999999999987543
No 99
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.33 E-value=7.8e-12 Score=120.81 Aligned_cols=132 Identities=13% Similarity=0.003 Sum_probs=90.3
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecc---cCCCCCCCCeeEEEeccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFAS---KQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~---~~Lpf~d~sFDlVvss~~ 326 (474)
...+|||+|||+|.++..+++.-.....|+++|+++.|++.++++. .++..+..+. ...++..++||+|++..
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~- 155 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADV- 155 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECC-
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEec-
Confidence 4589999999999999999987223468999999999999887652 2344444443 33467778999999753
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEee
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 390 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~ 390 (474)
.+..+...++.++.|+|||||+++++..........+..+ ...+....+++.+|+....
T Consensus 156 --~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~---~~~~ev~~L~~~GF~l~e~ 214 (233)
T 4df3_A 156 --AQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSE---VYKREIKTLMDGGLEIKDV 214 (233)
T ss_dssp --CCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCH---HHHHHHHHHHHTTCCEEEE
T ss_pred --cCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHH---HHHHHHHHHHHCCCEEEEE
Confidence 2335667899999999999999999865433221111111 1222334455678876654
No 100
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.33 E-value=5.4e-12 Score=118.59 Aligned_cols=133 Identities=17% Similarity=0.149 Sum_probs=91.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHH----HH----cCC-CcEEEeecccCCCCCCCCeeEEEecc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLT----LE----RGL-PAMIGSFASKQLPYPSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A----~e----rg~-~~~~~~~d~~~Lpf~d~sFDlVvss~ 325 (474)
.+|||||||+|.++..+++.. ....++++|+++.|++.+ ++ .+. ++.+..+|+..+|+++++ |.|+...
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~ 106 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLM 106 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEES
T ss_pred CEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEc
Confidence 789999999999999999873 347899999999988753 21 233 577888999999998877 8877443
Q ss_pred ccc----cccccHHHHHHHHHhhcCCCcEEEEEeCCCCchh------hhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 326 CGV----DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQA------FLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 326 ~l~----~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~------~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
... ++..++..+++++.|+|||||.++++.....+.. ..+.......-+.+..+.+..+|+...
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 107 PWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp CCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred cchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 211 1335557899999999999999999653221110 000001111123366778888888765
No 101
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.32 E-value=2.3e-12 Score=122.74 Aligned_cols=101 Identities=19% Similarity=0.202 Sum_probs=80.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCC-C--CCCCCeeEEEecc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQL-P--YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~L-p--f~d~sFDlVvss~ 325 (474)
..+|||||||+|.++..+++.. ....++|+|+++.+++.|+++ ++ ++.+..+|+..+ + +++++||.|++.+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 3689999999999999999874 346899999999999888754 44 577888887774 4 7899999999875
Q ss_pred ccccccccH--------HHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKD--------GILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~--------~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ..|.... ..++.++.|+|||||+|++.+.
T Consensus 114 ~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 P-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp C-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred C-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 4 3442221 2599999999999999999874
No 102
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=7.9e-12 Score=118.31 Aligned_cols=98 Identities=20% Similarity=0.124 Sum_probs=72.3
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHH----HHHHcCCCcEEEeecccC----CCCCCCCeeEEEec
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ----LTLERGLPAMIGSFASKQ----LPYPSLSFDMLHCA 324 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~----~A~erg~~~~~~~~d~~~----Lpf~d~sFDlVvss 324 (474)
...+|||||||+|.++..+++... ...|+++|+|+.|++ .|+++ .++.+..+|+.. .+++ ++||+|++.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 347899999999999999987632 358999999998653 44433 355666667655 3555 799999987
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.. . ..+...++.++.|+|||||+|+++.+
T Consensus 134 ~~-~--~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 134 IA-Q--KNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp CC-S--TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc-C--hhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 31 2 12334569999999999999999853
No 103
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.32 E-value=4.8e-12 Score=118.53 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=80.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC---CcEEEeecccCCC--CCCCC-eeEEEec
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLP--YPSLS-FDMLHCA 324 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~---~~~~~~~d~~~Lp--f~d~s-FDlVvss 324 (474)
.+|||+|||+|.++..++.++. ..++++|+++.|++.|+++ ++ ++.+..+|+..+. +++++ ||+|++.
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 6899999999999998777753 5799999999999998865 43 5678888876643 24678 9999998
Q ss_pred cccccccccHHHHHHHH--HhhcCCCcEEEEEeCCC
Q 011964 325 RCGVDWDQKDGILLLEV--DRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei--~RvLKPGG~lvis~~~~ 358 (474)
.. ++. .+...++.++ .|+|||||.++++....
T Consensus 133 ~~-~~~-~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PP-FHF-NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CC-SSS-CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CC-CCC-ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 66 343 5566788888 77899999999987654
No 104
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.32 E-value=4.7e-12 Score=130.77 Aligned_cols=102 Identities=20% Similarity=0.150 Sum_probs=85.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+|||+|||+|.++..+++.+ ..++++|+++.+++.|+++ ++.+.+...|+...+.++++||+|+++..+++
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 3689999999999999999885 4899999999999988765 56688888898888887789999999876443
Q ss_pred c----cccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 330 W----DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 330 ~----~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
. ..+...++.++.++|||||.++++....
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 1 2445689999999999999999987543
No 105
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.31 E-value=2.1e-11 Score=121.96 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=85.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.. ....++++|++ .+++.|+++ ++ .+.+..+|....+++++ ||+|++..++
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l 242 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFL 242 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCG
T ss_pred CCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchh
Confidence 4799999999999999998873 33689999999 999988765 33 36788888887777765 9999999987
Q ss_pred ccccc-cHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 328 VDWDQ-KDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 328 ~~~~~-d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
+++.+ +...+|+++.++|||||++++.++....
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 77742 2358999999999999999999987653
No 106
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.31 E-value=1.4e-11 Score=125.92 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=86.0
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC--CCCCCCeeEEEec
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL--PYPSLSFDMLHCA 324 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~L--pf~d~sFDlVvss 324 (474)
...+|||||||+|.++..+++.. +...++++|+ +.+++.|+++ ++ .+.+..+|+... |++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 34799999999999999999863 3468999999 9999998875 32 467788887775 576 789999999
Q ss_pred cccccccccH-HHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 325 RCGVDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 325 ~~l~~~~~d~-~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
.++++|.++. ..+|++++++|||||++++.++....
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 9988885332 47899999999999999999976654
No 107
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.31 E-value=3.2e-12 Score=132.61 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=92.8
Q ss_pred hhhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-----------C
Q 011964 230 VEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------G 298 (474)
Q Consensus 230 ~~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-----------g 298 (474)
....+..+.+.+...++ .+|||||||+|.++..++... ....++|+|+++.+++.|+++ +
T Consensus 158 ~~~~i~~il~~l~l~~g--------d~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G 228 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDD--------DLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYG 228 (438)
T ss_dssp HHHHHHHHHHHHCCCTT--------CEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCCC--------CEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 34555666666665555 789999999999999998652 224699999999999888652 3
Q ss_pred ---CCcEEEeecccCCCCCC--CCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 299 ---LPAMIGSFASKQLPYPS--LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 299 ---~~~~~~~~d~~~Lpf~d--~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
.++.+..+|+..+|+++ ..||+|+++.. ++ .++....|.+++|+|||||.|++++.....
T Consensus 229 l~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~-~F-~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 229 KKHAEYTLERGDFLSEEWRERIANTSVIFVNNF-AF-GPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp BCCCEEEEEECCTTSHHHHHHHHTCSEEEECCT-TC-CHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred CCCCCeEEEECcccCCccccccCCccEEEEccc-cc-CchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 35778899998888764 47999998755 33 367778999999999999999999876543
No 108
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.30 E-value=2.4e-11 Score=114.86 Aligned_cols=123 Identities=16% Similarity=0.084 Sum_probs=91.5
Q ss_pred CceEEEECCC-CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCC-CCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL-PYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCG-tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~L-pf~d~sFDlVvss~~l 327 (474)
..+|||+||| +|.++..+++.. ...++++|+++.+++.|+++ ++++.+..+|+..+ ++++++||+|+++...
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 4799999999 999999999873 36899999999999988765 55678888876433 5667899999988553
Q ss_pred cccc------------------ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 328 VDWD------------------QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 328 ~~~~------------------~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
++.. .....++.++.++|||||++++..+... .....+..+.++.+|+...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----------~~~~~~~~~l~~~g~~~~~ 202 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-----------KLLNVIKERGIKLGYSVKD 202 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-----------HHHHHHHHHHHHTTCEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-----------hHHHHHHHHHHHcCCceEE
Confidence 3221 1136789999999999999999765321 1234556677777886544
No 109
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.30 E-value=6.8e-12 Score=120.94 Aligned_cols=101 Identities=21% Similarity=0.205 Sum_probs=78.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----------CC-CcEEEeecccC-CC--CCCCCee
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------GL-PAMIGSFASKQ-LP--YPSLSFD 319 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----------g~-~~~~~~~d~~~-Lp--f~d~sFD 319 (474)
..+|||||||+|.++..|++.. ....++|+|+++.|++.|+++ +. ++.+..+|+.. ++ +++++||
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 4689999999999999999873 346899999999999887642 22 56788888876 66 8899999
Q ss_pred EEEecccccccccc--------HHHHHHHHHhhcCCCcEEEEEeC
Q 011964 320 MLHCARCGVDWDQK--------DGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 320 lVvss~~l~~~~~d--------~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.|++.+. ..|... ...+++++.++|||||.|++.+.
T Consensus 126 ~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 126 KMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 9987643 233211 13699999999999999999875
No 110
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.29 E-value=7.6e-12 Score=127.39 Aligned_cols=98 Identities=17% Similarity=0.213 Sum_probs=80.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.+. ..++++|+++ |++.|+++ ++. +.+..++++.+++++++||+|++..+.
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGA--RKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTC--SEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCEEEEEeccchHHHHHHHHCCC--CEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 37899999999999999998853 5899999994 88877754 443 788899999999999999999996532
Q ss_pred --ccccccHHHHHHHHHhhcCCCcEEEEE
Q 011964 328 --VDWDQKDGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 328 --~~~~~d~~~~L~ei~RvLKPGG~lvis 354 (474)
++...+...++.++.|+|||||++++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 233466788999999999999999743
No 111
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.29 E-value=1.7e-11 Score=122.12 Aligned_cols=130 Identities=12% Similarity=0.159 Sum_probs=89.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEE-EeecccCCC---CCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI-GSFASKQLP---YPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~-~~~d~~~Lp---f~d~sFDlVvss~~l~~ 329 (474)
..+|||||||||.++..|++.+. ..|+++|+++.|++.+.++...+.. ...++..++ ++..+||+|++..++++
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s 163 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS 163 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC
T ss_pred ccEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh
Confidence 46899999999999999998853 5899999999999886654433322 122333333 34456999999866544
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeCCC---Cch-----hhhhhH-HHHHHHHHHHHHHHhhCceEEe
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSPLT---NPQ-----AFLRNK-ENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~~~---~~~-----~~~~~~-e~~~~w~~~~~la~~l~W~~~~ 389 (474)
. ..+|.++.|+|||||.+++...+. ... +..++. .+...-+++..+++..+|....
T Consensus 164 l----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 164 L----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp G----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred H----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 3 569999999999999999973221 110 111122 2234456777888889998654
No 112
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.29 E-value=3.7e-11 Score=120.72 Aligned_cols=133 Identities=13% Similarity=0.153 Sum_probs=96.6
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
...+|||||||+|.++..+++.. ....++++|+ +.+++.|+++ ++ .+.+..+|.. .+++. +||+|++..+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 35799999999999999998863 3467899999 9999988765 33 4777878876 46665 8999999999
Q ss_pred ccccccc-HHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHH---------HHHHHHHHHHHHhhCceEEe
Q 011964 327 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKEN---------QKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 327 l~~~~~d-~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~---------~~~w~~~~~la~~l~W~~~~ 389 (474)
+++|.++ ...+|++++++|||||++++.++...........+. .....+++.++++.||+.+.
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 317 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRA 317 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 8888433 368999999999999999999986654200000000 01124556777778877664
No 113
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.28 E-value=1.6e-11 Score=121.01 Aligned_cols=104 Identities=11% Similarity=-0.008 Sum_probs=81.4
Q ss_pred CceEEEECCCC---chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCC-----------CCCC
Q 011964 254 VRTILDIGCGY---GSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLP-----------YPSL 316 (474)
Q Consensus 254 ~~~VLDIGCGt---G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~~~Lp-----------f~d~ 316 (474)
..+|||||||+ |.++..+.+.. ....|+++|+|+.|++.|+++. ..+.+..+|+.+.+ ++..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 47899999999 98876665542 2368999999999999998762 35677878875421 3334
Q ss_pred CeeEEEeccccccccc-cHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 317 SFDMLHCARCGVDWDQ-KDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 317 sFDlVvss~~l~~~~~-d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+||+|++..+++++.+ +...+|+++.++|||||+|++++...
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 8999999988666643 26789999999999999999999765
No 114
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.28 E-value=1.6e-11 Score=119.37 Aligned_cols=121 Identities=18% Similarity=0.070 Sum_probs=91.3
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCC---CCCeeEEEec
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYP---SLSFDMLHCA 324 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~---d~sFDlVvss 324 (474)
...+|||||||+|..+..++... ....|+++|+++.+++.|+++ ++ ++.+..+++++++.. +++||+|+|.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 45789999999999999998762 346899999999999988765 55 477888888887753 4799999986
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
.+ .+...++.++.++|||||+|++....... .....+....+..+|....
T Consensus 159 a~-----~~~~~ll~~~~~~LkpgG~l~~~~g~~~~----------~e~~~~~~~l~~~G~~~~~ 208 (249)
T 3g89_A 159 AV-----APLCVLSELLLPFLEVGGAAVAMKGPRVE----------EELAPLPPALERLGGRLGE 208 (249)
T ss_dssp SS-----CCHHHHHHHHGGGEEEEEEEEEEECSCCH----------HHHTTHHHHHHHHTEEEEE
T ss_pred Cc-----CCHHHHHHHHHHHcCCCeEEEEEeCCCcH----------HHHHHHHHHHHHcCCeEEE
Confidence 43 34578999999999999999987643211 1233345556677877654
No 115
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.28 E-value=9.5e-12 Score=126.32 Aligned_cols=96 Identities=15% Similarity=0.214 Sum_probs=79.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----C--CCcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g--~~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.+. ..++++|+++ |++.|+++ + ..+.+..+++..+++++++||+|++..+.
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred CCEEEEeeccCcHHHHHHHHcCC--CEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 37899999999999999998853 5899999996 88888764 3 35778888999999998899999987532
Q ss_pred --ccccccHHHHHHHHHhhcCCCcEEE
Q 011964 328 --VDWDQKDGILLLEVDRVLKPGGYFV 352 (474)
Q Consensus 328 --~~~~~d~~~~L~ei~RvLKPGG~lv 352 (474)
.....+...++.++.|+|||||.++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 2233456789999999999999998
No 116
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.28 E-value=1.7e-11 Score=114.37 Aligned_cols=107 Identities=18% Similarity=0.130 Sum_probs=85.0
Q ss_pred hHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeec
Q 011964 233 YSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFA 307 (474)
Q Consensus 233 ~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d 307 (474)
....+.+.+...++ .+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ +. ++.+..+|
T Consensus 65 ~~~~~~~~l~~~~~--------~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 133 (210)
T 3lbf_A 65 MVARMTELLELTPQ--------SRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD 133 (210)
T ss_dssp HHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred HHHHHHHhcCCCCC--------CEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECC
Confidence 33445555544433 799999999999999999874 5899999999999998875 33 46778888
Q ss_pred ccCCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 308 SKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 308 ~~~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
....+.++++||+|++..++.++ .+ ++.++|||||++++..+.
T Consensus 134 ~~~~~~~~~~~D~i~~~~~~~~~-~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 134 GWQGWQARAPFDAIIVTAAPPEI-PT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCGGGCCEEEEEESSBCSSC-CT------HHHHTEEEEEEEEEEECS
T ss_pred cccCCccCCCccEEEEccchhhh-hH------HHHHhcccCcEEEEEEcC
Confidence 87777777899999999775555 32 689999999999998875
No 117
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.28 E-value=6.1e-11 Score=121.33 Aligned_cols=104 Identities=23% Similarity=0.232 Sum_probs=84.7
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
...+|||||||+|.++..+++.. ....++++|+ +.+++.|+++ ++ .+.+..+|.. .+++. .||+|++..+
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHV 277 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESC
T ss_pred cCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhh
Confidence 34799999999999999999873 3468899999 9999988764 33 4777888876 56776 8999999999
Q ss_pred cccccccH-HHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 327 GVDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 327 l~~~~~d~-~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
+++|.++. ..+|++++++|||||++++.++....
T Consensus 278 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 278 LHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 87774322 27999999999999999999876544
No 118
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.27 E-value=1.8e-11 Score=114.69 Aligned_cols=99 Identities=12% Similarity=0.031 Sum_probs=79.5
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccC-CCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ-LPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~-Lpf~d~sFDlVvss~~l~ 328 (474)
.+|||+|||+|.++..++.++. ..|+++|+++.|++.|+++ ++ ++.+..+|+.. ++..+++||+|++... +
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p-~ 132 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP-F 132 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS-S
T ss_pred CeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC-C
Confidence 6899999999999998877753 4899999999999988765 43 56788888766 5667789999998765 3
Q ss_pred cccccHHHHHHHHHh--hcCCCcEEEEEeCC
Q 011964 329 DWDQKDGILLLEVDR--VLKPGGYFVWTSPL 357 (474)
Q Consensus 329 ~~~~d~~~~L~ei~R--vLKPGG~lvis~~~ 357 (474)
+. .....++.++.+ +|||||+++++...
T Consensus 133 ~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 RR-GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ST-TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CC-CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 43 455678888865 69999999998753
No 119
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.27 E-value=3.2e-12 Score=118.46 Aligned_cols=102 Identities=9% Similarity=-0.010 Sum_probs=64.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----CCcEEEeecccCCCCCC-----CCeeEEEec
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSFASKQLPYPS-----LSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----~~~~~~~~d~~~Lpf~d-----~sFDlVvss 324 (474)
..+|||+|||+|.++..+++.. ....++++|+++.+++.|+++. .++.+..+|+.. ++++ ++||+|+++
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVSN 108 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEEC
T ss_pred CCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEEC
Confidence 4799999999999999999874 3468999999999999888652 245566666665 5665 899999996
Q ss_pred ccccccc------cc-------------------HHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 325 RCGVDWD------QK-------------------DGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 325 ~~l~~~~------~d-------------------~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
...+... .. ...++.++.++|||||++++.+..
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 4422211 00 156889999999999995555543
No 120
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.27 E-value=1.8e-11 Score=115.85 Aligned_cols=109 Identities=12% Similarity=0.053 Sum_probs=84.1
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC---CcEEEeecc
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFAS 308 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~---~~~~~~~d~ 308 (474)
.....+.+.+...++ .+|||||||+|.++..+++.+ ..++++|+++.+++.|+++.. ++.+..+|.
T Consensus 57 ~~~~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~ 125 (231)
T 1vbf_A 57 NLGIFMLDELDLHKG--------QKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDG 125 (231)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc
Confidence 334455555544333 789999999999999999875 589999999999999987632 567777777
Q ss_pred cCCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 309 KQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 309 ~~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
.....++++||+|++..++.++. .++.++|||||++++..+..
T Consensus 126 ~~~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 126 TLGYEEEKPYDRVVVWATAPTLL-------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGCCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEECSS
T ss_pred ccccccCCCccEEEECCcHHHHH-------HHHHHHcCCCcEEEEEEcCC
Confidence 66333467899999998765552 37899999999999998643
No 121
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.26 E-value=9.8e-12 Score=112.87 Aligned_cols=102 Identities=11% Similarity=0.058 Sum_probs=78.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccC-CCCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~-Lpf~d~sFDlVvss~~ 326 (474)
..+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++ ++ .+.+..+|+.. ++..+++||+|++...
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 3689999999999999999874 35899999999999998765 33 36677777665 3444567999999755
Q ss_pred cccccccHHHHHHHHH--hhcCCCcEEEEEeCCCC
Q 011964 327 GVDWDQKDGILLLEVD--RVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~--RvLKPGG~lvis~~~~~ 359 (474)
++. .....++..+. ++|||||++++......
T Consensus 110 -~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 110 -YAK-ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp -SHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred -CCc-chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 222 33456777776 99999999999886543
No 122
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.26 E-value=5.7e-11 Score=120.91 Aligned_cols=99 Identities=23% Similarity=0.338 Sum_probs=80.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.. ....++++|+ +.+++.|+++ ++ .+.+..+|... +++. .||+|++..++
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl 258 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFVL 258 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESCG
T ss_pred CCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEeccc
Confidence 4799999999999999999874 3468999999 9999988764 33 47777777754 4554 49999999998
Q ss_pred ccccccH-HHHHHHHHhhcCCCcEEEEEeC
Q 011964 328 VDWDQKD-GILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 328 ~~~~~d~-~~~L~ei~RvLKPGG~lvis~~ 356 (474)
++|.+.. ..+|+++.++|||||++++.++
T Consensus 259 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 259 LNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 7774322 3899999999999999999988
No 123
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.26 E-value=1.8e-11 Score=111.36 Aligned_cols=121 Identities=16% Similarity=0.081 Sum_probs=87.5
Q ss_pred cchhhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--Cc
Q 011964 228 DGVEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PA 301 (474)
Q Consensus 228 d~~~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~ 301 (474)
.....+.+.+.+.+... ....+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++ ++ ++
T Consensus 26 p~~~~~~~~~~~~l~~~-------~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 96 (187)
T 2fhp_A 26 PTTDKVKESIFNMIGPY-------FDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITKEPEKF 96 (187)
T ss_dssp CCCHHHHHHHHHHHCSC-------CSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHTCGGGE
T ss_pred cCHHHHHHHHHHHHHhh-------cCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhCCCcce
Confidence 33455555666655321 123689999999999999888764 35899999999999988765 33 36
Q ss_pred EEEeecccCC----CCCCCCeeEEEeccccccccccHHHHHHHH--HhhcCCCcEEEEEeCCCC
Q 011964 302 MIGSFASKQL----PYPSLSFDMLHCARCGVDWDQKDGILLLEV--DRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 302 ~~~~~d~~~L----pf~d~sFDlVvss~~l~~~~~d~~~~L~ei--~RvLKPGG~lvis~~~~~ 359 (474)
.+..+|+... ++++++||+|++... ++. ......+..+ .++|||||.+++..+...
T Consensus 97 ~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 97 EVRKMDANRALEQFYEEKLQFDLVLLDPP-YAK-QEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCC-GGG-CCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EEEECcHHHHHHHHHhcCCCCCEEEECCC-CCc-hhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 6777776552 233678999999866 332 4456677777 999999999999886543
No 124
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.25 E-value=5e-11 Score=115.65 Aligned_cols=120 Identities=16% Similarity=0.114 Sum_probs=88.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCC--CCCCCeeEEEeccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP--YPSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lp--f~d~sFDlVvss~~ 326 (474)
.+|||+|||+|.++..+++++. ..++++|+++.+++.|+++ ++ ++.+..+|+..++ +++++||+|+++-.
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 7899999999999999998853 3899999999999998765 44 3678888887765 56789999999744
Q ss_pred cccc-------------------cccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceE
Q 011964 327 GVDW-------------------DQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWEL 387 (474)
Q Consensus 327 l~~~-------------------~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~ 387 (474)
.+.. ..+...++.++.++|||||++++..+... ..++...++..+|..
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------~~~~~~~l~~~~~~~ 195 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER-------------LLDIIDIMRKYRLEP 195 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT-------------HHHHHHHHHHTTEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH-------------HHHHHHHHHHCCCce
Confidence 2221 01235799999999999999999764321 223445566667765
Q ss_pred Ee
Q 011964 388 VS 389 (474)
Q Consensus 388 ~~ 389 (474)
..
T Consensus 196 ~~ 197 (259)
T 3lpm_A 196 KR 197 (259)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 125
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.25 E-value=3.1e-11 Score=115.79 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=90.7
Q ss_pred ceEEEECCCCchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHc-----C-CCcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 255 RTILDIGCGYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLER-----G-LPAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~er-----g-~~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
.+|||+|||+|.++..+++. + ....++++|+++.+++.|+++ + .++.+...|+...++++++||+|++.
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~--- 173 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVG-EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD--- 173 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE---
T ss_pred CEEEEECCCcCHHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC---
Confidence 79999999999999999887 3 235899999999999998876 4 34677888888888888899999974
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
+ +++..++.++.++|||||++++.++.. ....++...++..+|..+.
T Consensus 174 --~-~~~~~~l~~~~~~L~~gG~l~~~~~~~------------~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 174 --L-MEPWKVLEKAALALKPDRFLVAYLPNI------------TQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp --S-SCGGGGHHHHHHHEEEEEEEEEEESCH------------HHHHHHHHHHTTTTEEEEE
T ss_pred --C-cCHHHHHHHHHHhCCCCCEEEEEeCCH------------HHHHHHHHHHHHCCCceEE
Confidence 2 455679999999999999999998642 1123344445567777554
No 126
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.24 E-value=6.3e-12 Score=117.74 Aligned_cols=99 Identities=10% Similarity=0.214 Sum_probs=78.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
+.+|||||||+|.++..++..... ..++++|+++.|++.++++ |+...+...+.... .+.++||+|++..++++
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~-a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LHl 127 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEK-IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLPV 127 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCC-CEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHHh
Confidence 479999999999999999776433 4999999999999998865 55544444454333 45678999999988666
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
+ ++.+.++.++.+.|||||+||-..
T Consensus 128 L-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 128 L-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp H-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred h-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 6 666677889999999999988766
No 127
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.24 E-value=5.4e-12 Score=121.62 Aligned_cols=125 Identities=14% Similarity=0.148 Sum_probs=80.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEE------eecccCCC---CCCCCeeEEEec
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIG------SFASKQLP---YPSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~------~~d~~~Lp---f~d~sFDlVvss 324 (474)
..+|||||||+|.++..+++.+. ..++++|+|+.|++.|+++...+... ......++ ++..+||+++++
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CCEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 46899999999999999998853 48999999999999988764433221 11112222 223345544332
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhh--------hhh-HHHHHHHHHHHHHHHhhCceEEe
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAF--------LRN-KENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~--------~~~-~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
+ ..+|.++.|+|||||.+++...+.....+ .++ .......+++..+++..||+...
T Consensus 116 -----l----~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~ 180 (232)
T 3opn_A 116 -----L----DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKG 180 (232)
T ss_dssp -----G----GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred -----H----HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEE
Confidence 2 56999999999999999997411100000 001 11223456777888999998765
No 128
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.24 E-value=1.4e-11 Score=126.66 Aligned_cols=99 Identities=18% Similarity=0.181 Sum_probs=80.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.+. ..|+++|++ .|++.|+++ ++. +.+..++++.++++ ++||+|++....
T Consensus 64 ~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 64 GKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG 139 (376)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB
T ss_pred CCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh
Confidence 47899999999999999999863 489999999 899888754 443 67888899999887 799999996543
Q ss_pred ccc--cccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 328 VDW--DQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 328 ~~~--~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+.. ......++.++.++|||||++++...
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 322 24567899999999999999987543
No 129
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.24 E-value=6e-11 Score=112.98 Aligned_cols=94 Identities=16% Similarity=0.086 Sum_probs=75.4
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccC----CCCCCCCeeEEEecc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQ----LPYPSLSFDMLHCAR 325 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~~~----Lpf~d~sFDlVvss~ 325 (474)
...+|||+|||+|.++..+++... ...++++|+++.+++.|+++. .++.+..+|+.. ++++ ++||+|++.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~- 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYED- 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEEC-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEe-
Confidence 347899999999999999998721 358999999999998887652 346677778777 7776 789999932
Q ss_pred ccccccccH---HHHHHHHHhhcCCCcEEEEE
Q 011964 326 CGVDWDQKD---GILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 326 ~l~~~~~d~---~~~L~ei~RvLKPGG~lvis 354 (474)
. .++ ..++.++.++|||||+++++
T Consensus 151 ----~-~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 151 ----V-AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ----C-CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----c-CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 1 233 67899999999999999997
No 130
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.24 E-value=1.3e-11 Score=110.68 Aligned_cols=118 Identities=20% Similarity=0.197 Sum_probs=84.6
Q ss_pred hhhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEe
Q 011964 230 VEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGS 305 (474)
Q Consensus 230 ~~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~ 305 (474)
.....+.+.+.+..... ...+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ ++++.+..
T Consensus 24 ~~~~~~~~~~~~~~~~~------~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 94 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYP------RRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVVA 94 (171)
T ss_dssp CHHHHHHHHHHHHHHCT------TCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHHHHHHhhcc------CCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEEe
Confidence 34455555555543210 236899999999999999998864 399999999999988765 44677777
Q ss_pred ecccCC-C-C--CCCCeeEEEeccccccccccHHHHHHHHH--hhcCCCcEEEEEeCCCC
Q 011964 306 FASKQL-P-Y--PSLSFDMLHCARCGVDWDQKDGILLLEVD--RVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 306 ~d~~~L-p-f--~d~sFDlVvss~~l~~~~~d~~~~L~ei~--RvLKPGG~lvis~~~~~ 359 (474)
.|+... + + .+++||+|++...++ .+...++..+. ++|||||.+++..+...
T Consensus 95 ~d~~~~~~~~~~~~~~~D~i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 95 LPVEVFLPEAKAQGERFTVAFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred ccHHHHHHhhhccCCceEEEEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 776652 2 1 134899999986533 33445677777 99999999999887543
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.24 E-value=4.1e-11 Score=111.35 Aligned_cols=96 Identities=15% Similarity=0.099 Sum_probs=78.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
..+|||+|||+|.++..++... ....++++|+++.+++.|+++ ++ ++.+...+...++ ++++||+|++...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 3689999999999999998762 236899999999999988764 44 3677778877765 4578999997532
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.+...++.++.++|+|||++++...
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4557899999999999999999864
No 132
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.24 E-value=4.6e-11 Score=117.70 Aligned_cols=122 Identities=7% Similarity=0.115 Sum_probs=94.1
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||+|||+|.++..+++.+.. .++++|+++.+++.|+++ ++. +.+..+|+..++. +++||+|++...
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p- 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV- 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-
T ss_pred CCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-
Confidence 378999999999999999988642 799999999999988765 443 6688888888876 779999998633
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
.....++.++.++|||||.+++.+....... .....+.+...++..+|+...
T Consensus 202 ----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc------cccHHHHHHHHHHHcCCeeEE
Confidence 2335689999999999999999886532110 112345667788888888655
No 133
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.23 E-value=1.6e-11 Score=117.40 Aligned_cols=136 Identities=13% Similarity=0.113 Sum_probs=85.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCC-HHHHHHH---HHc----CC-CcEEEeecccCCCCC-CCCeeEEEe
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEAS-GSQVQLT---LER----GL-PAMIGSFASKQLPYP-SLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s-~~~l~~A---~er----g~-~~~~~~~d~~~Lpf~-d~sFDlVvs 323 (474)
..+|||||||+|.++..+++.. ....++|+|+| +.|++.| +++ ++ ++.+..++++.+|.. .+.+|.|++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 3689999999999999998653 34689999999 7777776 432 44 477888888888632 245666665
Q ss_pred ccccc----cccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhh----h-HHHHHHH---HHHHHHHHhhCceEEee
Q 011964 324 ARCGV----DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLR----N-KENQKRW---NFVRDFVENLCWELVSQ 390 (474)
Q Consensus 324 s~~l~----~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~----~-~e~~~~w---~~~~~la~~l~W~~~~~ 390 (474)
.+... ++..+...+|.+++|+|||||+|++...........+ . ......| .++....++.+|+....
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 43211 1112235689999999999999999433222100000 0 0000111 13677778889887653
No 134
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.22 E-value=5.7e-11 Score=117.39 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=77.5
Q ss_pred CceEEEECCCCch----HHHHhhhc-CC-c-eeEEEEecCCHHHHHHHHHcC----------------------------
Q 011964 254 VRTILDIGCGYGS----FGAHLFSK-EL-L-TMCIANYEASGSQVQLTLERG---------------------------- 298 (474)
Q Consensus 254 ~~~VLDIGCGtG~----~~~~La~~-g~-~-~~~v~giD~s~~~l~~A~erg---------------------------- 298 (474)
..+|||+|||||. ++..|++. +. . ...|+|+|+|+.|++.|++..
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 3689999999998 55556554 21 1 258999999999999998741
Q ss_pred --------CCcEEEeecccCCCCC-CCCeeEEEecccccccccc-HHHHHHHHHhhcCCCcEEEEE
Q 011964 299 --------LPAMIGSFASKQLPYP-SLSFDMLHCARCGVDWDQK-DGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 299 --------~~~~~~~~d~~~Lpf~-d~sFDlVvss~~l~~~~~d-~~~~L~ei~RvLKPGG~lvis 354 (474)
..+.+...|....|++ .+.||+|+|..+++++.+. ...++.+++++|+|||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0355677777776665 5789999999887777432 268999999999999999983
No 135
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.22 E-value=1.1e-10 Score=118.43 Aligned_cols=100 Identities=23% Similarity=0.341 Sum_probs=80.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.. ....++++|+ +.+++.|+++ ++ .+.+..+|..+ +++. .||+|++..++
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl 259 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFVL 259 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESCG
T ss_pred CcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcccc
Confidence 4799999999999999999874 3467889999 8899888764 34 47777777654 4554 49999999997
Q ss_pred ccccccH-HHHHHHHHhhcCCCcEEEEEeCC
Q 011964 328 VDWDQKD-GILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 328 ~~~~~d~-~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+++.+.. ..+++++.++|||||++++.++.
T Consensus 260 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 260 LNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 7774322 47999999999999999999987
No 136
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.21 E-value=5e-11 Score=120.28 Aligned_cols=112 Identities=19% Similarity=0.281 Sum_probs=85.7
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEE
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIG 304 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~ 304 (474)
..|.+.+.+.+...++ .+|||||||+|.++..+++.+. ..++++|++ .|++.|+++ ++ .+.+.
T Consensus 24 ~~y~~ai~~~~~~~~~--------~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~ 92 (328)
T 1g6q_1 24 LSYRNAIIQNKDLFKD--------KIVLDVGCGTGILSMFAAKHGA--KHVIGVDMS-SIIEMAKELVELNGFSDKITLL 92 (328)
T ss_dssp HHHHHHHHHHHHHHTT--------CEEEEETCTTSHHHHHHHHTCC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHhhHhhcCC--------CEEEEecCccHHHHHHHHHCCC--CEEEEEChH-HHHHHHHHHHHHcCCCCCEEEE
Confidence 3455555544443333 7899999999999999998753 589999999 588877654 44 36788
Q ss_pred eecccCCCCCCCCeeEEEecccccc--ccccHHHHHHHHHhhcCCCcEEEE
Q 011964 305 SFASKQLPYPSLSFDMLHCARCGVD--WDQKDGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 305 ~~d~~~Lpf~d~sFDlVvss~~l~~--~~~d~~~~L~ei~RvLKPGG~lvi 353 (474)
.+++.++++++++||+|++....+. .......++.++.++|||||.++.
T Consensus 93 ~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 93 RGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 8899999988889999999754222 234567899999999999999984
No 137
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.21 E-value=3.6e-11 Score=117.81 Aligned_cols=117 Identities=9% Similarity=0.078 Sum_probs=88.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-----CC-CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||+|||+|.++..+++.-.....++++|+++.+++.|+++ +. ++.+..+|+.. ++++++||+|++.
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~--- 186 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD--- 186 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC---
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc---
Confidence 37999999999999999987611235899999999999988865 33 46777778776 6777899999973
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
. +++..++.++.++|||||++++.++... ....+....+..+|..+.
T Consensus 187 --~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~------------~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 187 --I-PDPWNHVQKIASMMKPGSVATFYLPNFD------------QSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp --C-SCGGGSHHHHHHTEEEEEEEEEEESSHH------------HHHHHHHHSGGGTEEEEE
T ss_pred --C-cCHHHHHHHHHHHcCCCCEEEEEeCCHH------------HHHHHHHHHHHCCCeEEE
Confidence 2 4556799999999999999999986421 123344455566776544
No 138
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.21 E-value=7.1e-11 Score=119.33 Aligned_cols=134 Identities=12% Similarity=0.158 Sum_probs=96.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCC-CCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lp-f~d~sFDlVvss~~ 326 (474)
..+|||||||+|.++..+++.. ....++++|+ +.+++.|+++ ++ .+.+..+|....+ +..+.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 5799999999999999999873 3468899999 7788877754 33 3677778877665 23456999999999
Q ss_pred ccccccc-HHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHH---H-----------HHHHHHHHHHHHhhCceEEe
Q 011964 327 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE---N-----------QKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 327 l~~~~~d-~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e---~-----------~~~w~~~~~la~~l~W~~~~ 389 (474)
+++|.++ ...+|++++++|||||++++.++........+... . .....+++.++++.||+.+.
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 8888432 36899999999999999999987654321111000 0 01124556778888888765
No 139
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.21 E-value=7e-11 Score=118.50 Aligned_cols=101 Identities=16% Similarity=0.110 Sum_probs=82.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC------CCcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------LPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg------~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+|||||||+|.++..+++.. ....++++|+ +.+++.|+++- ..+.+..+|... +++ ++||+|++..+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 799999999999999998873 3458999999 99998887652 347777788766 666 6799999999988
Q ss_pred cccccH-HHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 329 DWDQKD-GILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 329 ~~~~d~-~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
+|.++. ..+|++++++|||||++++.++...
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 884322 3899999999999999999987643
No 140
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.21 E-value=2.3e-11 Score=125.25 Aligned_cols=101 Identities=17% Similarity=0.160 Sum_probs=78.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC----CcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL----PAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~----~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
.+|||+|||+|.++..+++.+ ....++++|+++.+++.|+++ ++ .+.+...|... ++++++||+|+++..
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCC
Confidence 789999999999999999884 246899999999999988765 32 35567777665 577889999999876
Q ss_pred cccc---ccc-HHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 327 GVDW---DQK-DGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 327 l~~~---~~d-~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+++. ... ...++.++.++|||||.++++...
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 4432 111 236899999999999999998753
No 141
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.21 E-value=1.7e-11 Score=124.27 Aligned_cols=117 Identities=16% Similarity=0.152 Sum_probs=87.7
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEee
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSF 306 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~ 306 (474)
+...+.+.+.+.... ..+|||||||+|.++..+++.+. ...++++|+++.+++.|+++ ++...+...
T Consensus 182 d~~~~~ll~~l~~~~--------~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~ 252 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHT--------KGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVEGEVFAS 252 (343)
T ss_dssp CHHHHHHHHHSCTTC--------CSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred cHHHHHHHHhcCcCC--------CCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 344455555553322 25899999999999999998752 34799999999999988765 556667666
Q ss_pred cccCCCCCCCCeeEEEeccccccc----cccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 307 ASKQLPYPSLSFDMLHCARCGVDW----DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 307 d~~~Lpf~d~sFDlVvss~~l~~~----~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
|... +.+++||+|+++..+++. ..+...+++++.++|||||.+++..+..
T Consensus 253 d~~~--~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 253 NVFS--EVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp STTT--TCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred cccc--cccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 6544 447799999999774431 2345689999999999999999987643
No 142
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.20 E-value=5e-11 Score=116.21 Aligned_cols=97 Identities=18% Similarity=0.135 Sum_probs=80.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-----C---CCcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----G---LPAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-----g---~~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
.+|||+|||+|.++..+++.-.....++++|+++.+++.|+++ + .++.+...|+...++++++||+|++..
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~- 179 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDM- 179 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEES-
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECC-
Confidence 7899999999999999987511235899999999999988765 3 356788888888888888999999842
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.++..++.++.++|||||++++..+.
T Consensus 180 -----~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 180 -----LAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp -----SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred -----cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34557999999999999999999874
No 143
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.20 E-value=5.7e-12 Score=130.30 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=79.3
Q ss_pred CCceEEEECCC------CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCC------CCCeeE
Q 011964 253 GVRTILDIGCG------YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP------SLSFDM 320 (474)
Q Consensus 253 ~~~~VLDIGCG------tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~------d~sFDl 320 (474)
.+.+||||||| +|..+..+++.......|+++|+++.|. ....++.+.++|+.++||. +++||+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCccE
Confidence 34799999999 7777777766523346899999999883 2345678889999998887 789999
Q ss_pred EEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 321 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 321 Vvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
|++..+ +++ .+...+|++++|+|||||+|++.+..
T Consensus 292 Visdgs-H~~-~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 292 VIDDGS-HIN-AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EEECSC-CCH-HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EEECCc-ccc-hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 998743 444 66788999999999999999999865
No 144
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.20 E-value=5.8e-11 Score=114.17 Aligned_cols=95 Identities=21% Similarity=0.273 Sum_probs=78.9
Q ss_pred ceEEEECCCCchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCeeEEEecccc
Q 011964 255 RTILDIGCGYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
.+|||+|||+|.++..+++. + ....++++|+++.+++.|+++ ++. +.+...|+... +++++||+|++..
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~-- 170 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVG-PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILDL-- 170 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEECS--
T ss_pred CEEEEecCCchHHHHHHHHHhC-CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEECC--
Confidence 78999999999999999987 3 236899999999999998876 443 67777787654 7788999999742
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+++..++.++.++|||||++++..+.
T Consensus 171 ----~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 171 ----PQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp ----SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred ----CCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 45567999999999999999998864
No 145
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.20 E-value=1.5e-10 Score=117.28 Aligned_cols=131 Identities=13% Similarity=0.078 Sum_probs=89.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHH--cC--CCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE--RG--LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~e--rg--~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+|||||||+|.++..+++.. ....++++|.+ .++..++. .+ ..+.+..+|+. .+++ +||+|++..++++
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~ 259 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILHN 259 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGGG
T ss_pred CceEEEECCccCHHHHHHHHHC-CCCEEEEecCH-HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhccC
Confidence 4799999999999999999874 34678999994 44441110 12 23677777875 4555 8999999999888
Q ss_pred ccccH-HHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHH------------HHHHHHHHHHHHhhCceEEe
Q 011964 330 WDQKD-GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKEN------------QKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 330 ~~~d~-~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~------------~~~w~~~~~la~~l~W~~~~ 389 (474)
|.+.. ..+|++++++|||||+|++.++............. .....+++.++++.||+.+.
T Consensus 260 ~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 332 (348)
T 3lst_A 260 WGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDR 332 (348)
T ss_dssp SCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEE
Confidence 84322 58999999999999999999876543211000000 01134556777888887654
No 146
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.20 E-value=4.7e-11 Score=116.05 Aligned_cols=116 Identities=17% Similarity=0.176 Sum_probs=88.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ ++.+.+...+... ++++++||+|+++... +
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~-~ 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYA-E 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCH-H
T ss_pred CCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcH-H
Confidence 37899999999999999998763 899999999999888764 4446666666544 2556789999987442 2
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
....++.++.++|||||++++++.... ....+....++.+|+.+.
T Consensus 196 ---~~~~~l~~~~~~LkpgG~lils~~~~~------------~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 196 ---LHAALAPRYREALVPGGRALLTGILKD------------RAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp ---HHHHHHHHHHHHEEEEEEEEEEEEEGG------------GHHHHHHHHHHTTCEEEE
T ss_pred ---HHHHHHHHHHHHcCCCCEEEEEeeccC------------CHHHHHHHHHHCCCEEEE
Confidence 235799999999999999999875321 134556677778888765
No 147
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.20 E-value=5.1e-11 Score=119.43 Aligned_cols=111 Identities=16% Similarity=0.081 Sum_probs=85.8
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEee
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSF 306 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~ 306 (474)
.....+.+.+...++ .+|||||||+|.++..+++.+.....++++|+++.+++.|+++ ++ ++.+..+
T Consensus 62 ~~~~~l~~~l~~~~~--------~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~ 133 (317)
T 1dl5_A 62 SLMALFMEWVGLDKG--------MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG 133 (317)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCCCc--------CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 344555555554444 7999999999999999998743235699999999999988865 43 3677788
Q ss_pred cccCCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 307 ASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 307 d~~~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
|....+.++++||+|++..++.+.. .++.++|||||.+++....
T Consensus 134 d~~~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 134 DGYYGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBCB
T ss_pred ChhhccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEECC
Confidence 8877665678999999998866553 5788999999999998643
No 148
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.20 E-value=7.4e-11 Score=119.85 Aligned_cols=102 Identities=16% Similarity=0.234 Sum_probs=84.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.. ....++++|+ +.+++.|+++ ++ .+.+..+|+...|+++. |+|++..++
T Consensus 191 ~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vl 266 (359)
T 1x19_A 191 VKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRIL 266 (359)
T ss_dssp CCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCG
T ss_pred CCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechh
Confidence 4799999999999999999873 3468999999 9999988765 43 37788888888887764 999999998
Q ss_pred cccccc-HHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 328 VDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 328 ~~~~~d-~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
++|.++ ...+|+++.++|||||++++.++...
T Consensus 267 h~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 267 YSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp GGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 888432 56899999999999999999986553
No 149
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.19 E-value=4e-11 Score=106.93 Aligned_cols=98 Identities=13% Similarity=0.056 Sum_probs=76.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC--------CCCCCeeEEEecc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP--------YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp--------f~d~sFDlVvss~ 325 (474)
..+|||+|||+|.++..+++.......++++|+++ +++. .++.+..+|....+ +++++||+|++..
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~ 96 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDM 96 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEEECC
Confidence 36899999999999999988711235899999998 7543 35667777887776 7788999999976
Q ss_pred ccccccccH-----------HHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 326 CGVDWDQKD-----------GILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 326 ~l~~~~~d~-----------~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
.+ ++..+. ..++.++.++|||||.+++.++..
T Consensus 97 ~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 97 AP-NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred Cc-cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 63 332333 578999999999999999988754
No 150
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=6.5e-11 Score=110.78 Aligned_cols=96 Identities=17% Similarity=0.101 Sum_probs=75.2
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ +. ++.+...+.......+++||+|++..++.+
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 158 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPK 158 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBBSS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCchHH
Confidence 7999999999999999988742225899999999999998865 33 366666666432223678999999988665
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+. .++.++|||||.+++..+.
T Consensus 159 ~~-------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 159 IP-------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp CC-------HHHHHTEEEEEEEEEEESS
T ss_pred HH-------HHHHHHcCCCcEEEEEECC
Confidence 52 4889999999999998864
No 151
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.19 E-value=5.9e-11 Score=112.24 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=77.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccC-CCC-C----CCCeeEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPY-P----SLSFDML 321 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~-Lpf-~----d~sFDlV 321 (474)
+.+|||||||+|..+..+++.-.....++++|+++.+++.|+++ ++ .+.+..+|+.. ++. + .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 37899999999999999998522246899999999999998864 44 36677777644 332 2 2789999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 322 vss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
++.....++ .+...++.++ ++|||||++++.+...
T Consensus 139 ~~d~~~~~~-~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 139 FLDHWKDRY-LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EECSCGGGH-HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEcCCcccc-hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 988653443 3344577777 9999999999987654
No 152
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.18 E-value=8.3e-11 Score=114.69 Aligned_cols=102 Identities=15% Similarity=0.081 Sum_probs=79.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCC---------cEEEeecccCC-------CCCCCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLP---------AMIGSFASKQL-------PYPSLS 317 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~---------~~~~~~d~~~L-------pf~d~s 317 (474)
..+|||+|||+|.++..++++. ....++++|+++.+++.|+++-.. +.+..+|...+ ++++++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 3689999999999999999874 346899999999999999876322 66778887776 367889
Q ss_pred eeEEEeccccccc-----------------cccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 318 FDMLHCARCGVDW-----------------DQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 318 FDlVvss~~l~~~-----------------~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
||+|+++-..... ......++.++.++|||||+|++..+
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9999997332211 12356789999999999999999764
No 153
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.18 E-value=1.8e-10 Score=110.04 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=79.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-CCCCCeeEEEecc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~L-p-f~d~sFDlVvss~ 325 (474)
..+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++ ++.+..+|+... + ..+++||+|++..
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 3799999999999999999842 346899999999999988765 43 477888887653 3 3368999999763
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
. ..+...++.++.++|||||+|++.+..+
T Consensus 151 ~----~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 151 A----KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp T----SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred c----HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 2 2455779999999999999999976544
No 154
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.18 E-value=4.7e-10 Score=108.37 Aligned_cols=102 Identities=18% Similarity=0.165 Sum_probs=79.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccC-CCCC--CCCeeEEEec
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYP--SLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~-Lpf~--d~sFDlVvss 324 (474)
..+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ ++.+..+|+.. ++.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 37999999999999999998732246899999999999988865 44 36777777655 3432 3489999986
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
.. ..+...++.++.++|||||++++.+..+.
T Consensus 144 ~~----~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 144 AD----KPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp SC----GGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred Cc----hHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 42 24456799999999999999999877553
No 155
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.17 E-value=3.8e-12 Score=121.45 Aligned_cols=96 Identities=13% Similarity=0.168 Sum_probs=79.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||+|||+|.++..+++.+ ..++++|+++.+++.|+++ ++ ++.+..+|+..++ ++++||+|++...+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred CCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 3789999999999999999885 5899999999999988765 44 5778888887776 66799999998764
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEE
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis 354 (474)
.+ ..+....+.++.++|+|||.+++.
T Consensus 155 ~~-~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GG-PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SS-GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CC-cchhhhHHHHHHhhcCCcceeHHH
Confidence 44 355555788999999999997764
No 156
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.17 E-value=1.2e-10 Score=112.45 Aligned_cols=99 Identities=15% Similarity=0.028 Sum_probs=71.4
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHH----HHHHHcCCCcEEEeecccCCC---CCCCCeeEEEecc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQV----QLTLERGLPAMIGSFASKQLP---YPSLSFDMLHCAR 325 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l----~~A~erg~~~~~~~~d~~~Lp---f~d~sFDlVvss~ 325 (474)
...+|||+|||+|.++..+++.-.....|+++|+++.|+ +.|+++ .++.+..+|+.... ...++||+|++..
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEecC
Confidence 448999999999999999987622235899999999885 344443 46677777766532 1246899999874
Q ss_pred ccccccccHH-HHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDG-ILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~-~~L~ei~RvLKPGG~lvis~~ 356 (474)
. . ++.. .++..+.++|||||+|+++..
T Consensus 155 a-~---~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 155 A-Q---PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp C-C---TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred C-C---hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 4 2 3444 445566779999999999853
No 157
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.17 E-value=5.9e-11 Score=120.72 Aligned_cols=113 Identities=20% Similarity=0.178 Sum_probs=86.4
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEE
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIG 304 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~ 304 (474)
..|.+.+.+.+...+ ..+|||||||+|.++..+++.+. ..++++|+++ |++.|+++ ++ .+.+.
T Consensus 36 ~~y~~~i~~~l~~~~--------~~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~ 104 (348)
T 2y1w_A 36 GTYQRAILQNHTDFK--------DKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVI 104 (348)
T ss_dssp HHHHHHHHHTGGGTT--------TCEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-HHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHhccccCC--------cCEEEEcCCCccHHHHHHHhCCC--CEEEEECCHH-HHHHHHHHHHHcCCCCcEEEE
Confidence 445555555544333 37999999999999999998753 5899999996 88777654 43 47788
Q ss_pred eecccCCCCCCCCeeEEEecccccccc-ccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 305 SFASKQLPYPSLSFDMLHCARCGVDWD-QKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 305 ~~d~~~Lpf~d~sFDlVvss~~l~~~~-~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
.++++.++++ ++||+|++....+++. +.....+.++.++|||||.+++..
T Consensus 105 ~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 105 PGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred EcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 8888888776 5899999987766664 334578889999999999998653
No 158
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.17 E-value=2.6e-11 Score=116.77 Aligned_cols=98 Identities=13% Similarity=0.109 Sum_probs=78.4
Q ss_pred ceEEEECCCCchHHHHhhhc---CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC---CCCC-CCeeEEEecccc
Q 011964 255 RTILDIGCGYGSFGAHLFSK---ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL---PYPS-LSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~---g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L---pf~d-~sFDlVvss~~l 327 (474)
.+|||||||+|..+..|++. -.....|+++|+++.|++.|+....++.+..+|+... ++.+ .+||+|++...
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~- 161 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA- 161 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc-
Confidence 68999999999999999875 1134689999999999988774445677888888774 5444 47999998654
Q ss_pred ccccccHHHHHHHHHh-hcCCCcEEEEEeC
Q 011964 328 VDWDQKDGILLLEVDR-VLKPGGYFVWTSP 356 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~R-vLKPGG~lvis~~ 356 (474)
| .+...+|.++.| +|||||++++.+.
T Consensus 162 -~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 162 -H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp -C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred -h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 2 356789999998 9999999999875
No 159
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.17 E-value=1.8e-11 Score=111.27 Aligned_cols=113 Identities=16% Similarity=0.085 Sum_probs=84.3
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC-CCcEEEeecccCCCC---CCCCeeEEEeccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-LPAMIGSFASKQLPY---PSLSFDMLHCARCGV 328 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg-~~~~~~~~d~~~Lpf---~d~sFDlVvss~~l~ 328 (474)
...+|||||||. +.+|+|+.|++.|+++. ..+.+..++++.+++ ++++||+|+|..+++
T Consensus 12 ~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~ 74 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPG 74 (176)
T ss_dssp TTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTT
T ss_pred CCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhh
Confidence 347999999996 12899999999998874 247788889988887 889999999998855
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCc
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCW 385 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W 385 (474)
++..+...+|++++|+|||||+|++.++....... ........++...++..+|
T Consensus 75 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 75 STTLHSAEILAEIARILRPGGCLFLKEPVETAVDN---NSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCS---SSSSCCHHHHHHHHHHTTC
T ss_pred hcccCHHHHHHHHHHHCCCCEEEEEEccccccccc---ccccCCHHHHHHHHHHCCC
Confidence 55367789999999999999999997664321100 0000113456677788888
No 160
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.16 E-value=7.3e-11 Score=112.36 Aligned_cols=99 Identities=16% Similarity=0.122 Sum_probs=74.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHH----HHHHcCCCcEEEeecccC---CCCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ----LTLERGLPAMIGSFASKQ---LPYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~----~A~erg~~~~~~~~d~~~---Lpf~d~sFDlVvss~~ 326 (474)
..+|||+|||+|.++..+++.......++++|+++.|++ .|+++ .++.+..+|+.. +++.+++||+|++...
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 478999999999999999886212257999999977554 44443 467777778776 4566789999998643
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.......++.++.++|||||+++++..
T Consensus 157 ---~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 157 ---QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp ---CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 212224568899999999999999654
No 161
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.16 E-value=1.9e-10 Score=114.90 Aligned_cols=127 Identities=13% Similarity=0.105 Sum_probs=89.7
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccCCCC--CCCCeeEE
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQLPY--PSLSFDML 321 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------~~~~~~~~d~~~Lpf--~d~sFDlV 321 (474)
.+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++. .++.+..+|+..++. ++++||+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 34799999999999999998762 3468999999999999998753 346777777766553 47899999
Q ss_pred EeccccccccccH----HHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 322 HCARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 322 vss~~l~~~~~d~----~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
++... .++.+.. ..+++++.++|||||++++....... . ......+....++.+|..+.
T Consensus 174 i~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-----~---~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 174 IIDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL-----D---LELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTT-----C---HHHHHHHHHHHHHHTCSEEE
T ss_pred EECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc-----c---hHHHHHHHHHHHhCCCCcEE
Confidence 99754 3332222 57899999999999999998654311 1 11233445566667776543
No 162
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.16 E-value=1.5e-10 Score=109.20 Aligned_cols=98 Identities=15% Similarity=0.101 Sum_probs=77.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----C------CCcEEEeecccCCCCCCCCeeEEEe
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G------LPAMIGSFASKQLPYPSLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g------~~~~~~~~d~~~Lpf~d~sFDlVvs 323 (474)
..+|||||||+|.++..+++.......++++|+++.+++.++++ + .++.+..+|....+.++++||+|++
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~ 157 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHV 157 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEE
Confidence 37999999999999999987621224899999999999988754 2 2567777787766666778999998
Q ss_pred ccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 324 s~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
.....+ ++.++.++|||||+++++....
T Consensus 158 ~~~~~~-------~~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 158 GAAAPV-------VPQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp CSBBSS-------CCHHHHHTEEEEEEEEEEESCT
T ss_pred CCchHH-------HHHHHHHhcCCCcEEEEEEecC
Confidence 866433 3468899999999999988643
No 163
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.16 E-value=5.2e-11 Score=121.80 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=81.5
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
...+|||||||+|.++..++++. ....++++|+ +.+++.|++. ..+.+..+|+.. ++++ ||+|++..++++| .
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~-~ 281 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNW-S 281 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGS-C
T ss_pred CCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccC-C
Confidence 34799999999999999999874 3457889999 8898877653 347778888776 7765 9999999998777 4
Q ss_pred cHH--HHHHHHHhhcCCCcEEEEEeCCC
Q 011964 333 KDG--ILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 333 d~~--~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+.. .+|++++++|||||++++.++..
T Consensus 282 d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 282 DEKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 555 89999999999999999997644
No 164
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.15 E-value=1.1e-10 Score=112.50 Aligned_cols=101 Identities=23% Similarity=0.227 Sum_probs=78.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc------------CC-CcEEEeecccC-CC--CCCCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------------GL-PAMIGSFASKQ-LP--YPSLS 317 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er------------g~-~~~~~~~d~~~-Lp--f~d~s 317 (474)
..+|||||||+|.++..+++.+ ....++++|+++.+++.|+++ ++ ++.+..+|+.. ++ +++++
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 3689999999999999999875 245899999999999888653 43 56778888776 66 77899
Q ss_pred eeEEEecccccccccc--------HHHHHHHHHhhcCCCcEEEEEeC
Q 011964 318 FDMLHCARCGVDWDQK--------DGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 318 FDlVvss~~l~~~~~d--------~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
||.|+.... -.|... ...++.++.++|||||+|++.+.
T Consensus 129 ~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 129 LSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 999986532 122110 04799999999999999999653
No 165
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.15 E-value=2.6e-10 Score=111.63 Aligned_cols=119 Identities=17% Similarity=0.133 Sum_probs=85.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
..+|||+|||+|.++..+++.. ....++++|+|+.+++.|+++ ++ ++.+..+|... ++++++||+|+++...+
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCB
T ss_pred CCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCC
Confidence 3689999999999999998652 236899999999999988765 44 46777777655 34567899999974321
Q ss_pred cc------------c------------ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhC
Q 011964 329 DW------------D------------QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLC 384 (474)
Q Consensus 329 ~~------------~------------~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~ 384 (474)
.. . .....++.++.++|||||++++...... -..+..+.+..+
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------~~~~~~~l~~~G 254 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQ-------------GEAVRQAFILAG 254 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSC-------------HHHHHHHHHHTT
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchH-------------HHHHHHHHHHCC
Confidence 11 0 1335789999999999999999754221 123455566667
Q ss_pred ceE
Q 011964 385 WEL 387 (474)
Q Consensus 385 W~~ 387 (474)
|+.
T Consensus 255 f~~ 257 (276)
T 2b3t_A 255 YHD 257 (276)
T ss_dssp CTT
T ss_pred CcE
Confidence 753
No 166
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.14 E-value=1.4e-10 Score=118.66 Aligned_cols=101 Identities=18% Similarity=0.167 Sum_probs=82.5
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
...+|||||||+|.++..+++.. +...++++|+ +.+++.|++. ..+.+..+|+.. |++++ |+|++..++++|.+
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSD 276 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCH
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCCH
Confidence 35799999999999999999874 3467899999 8888877654 357788888776 77764 99999999888854
Q ss_pred cH-HHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 333 KD-GILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 333 d~-~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
+. ..+|++++++|||||++++.+....
T Consensus 277 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 277 EHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 32 4789999999999999999997654
No 167
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.14 E-value=3.6e-10 Score=113.43 Aligned_cols=125 Identities=19% Similarity=0.200 Sum_probs=89.3
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEeccc---
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARC--- 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~--- 326 (474)
.+|||+|||+|..+..+++.......++++|+++.+++.++++ ++ ++.+...|+..++..+++||+|++...
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg 199 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCTG 199 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTTS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCCC
Confidence 7899999999999999987632235899999999999888765 55 567888888877655678999997411
Q ss_pred --ccccccc----------------HHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEE
Q 011964 327 --GVDWDQK----------------DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELV 388 (474)
Q Consensus 327 --l~~~~~d----------------~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~ 388 (474)
.++..++ ...+|.++.++|||||++++++...... ++ -..++.++++.+|+.+
T Consensus 200 ~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~------En---e~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 200 SGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE------EN---EFVIQWALDNFDVELL 270 (315)
T ss_dssp TTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG------GT---HHHHHHHHHHSSEEEE
T ss_pred cccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH------Hh---HHHHHHHHhcCCCEEe
Confidence 1111111 1478999999999999999998755431 11 1234555666666654
No 168
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.14 E-value=9.3e-11 Score=111.84 Aligned_cols=100 Identities=11% Similarity=0.078 Sum_probs=77.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC---cEEEeecccCC-C-CCCCCeeEEEecc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQL-P-YPSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~---~~~~~~d~~~L-p-f~d~sFDlVvss~ 325 (474)
.+|||||||+|..+..+++.-.....++++|+++.+++.|+++ ++. +.+..+|+.+. + +++++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 4899999999999999988522246899999999999988765 443 66777776543 2 4468999999764
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
. ..+...++.++.++|||||++++.+..+
T Consensus 138 ~----~~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 138 S----PMDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp C----TTTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred c----HHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 3 2345679999999999999999976544
No 169
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.14 E-value=2.4e-10 Score=111.89 Aligned_cols=116 Identities=21% Similarity=0.172 Sum_probs=87.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+|||+|||+|.++..+++.-.....++++|+++.+++.|+++ ++ .+.+...|.... +++++||+|++..
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~--- 189 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV--- 189 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC---
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC---
Confidence 6899999999999999988711236899999999999998876 44 466777777666 6778999999742
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
+++..++.++.++|+|||.+++.++... ....+...++..+|..+.
T Consensus 190 ---~~~~~~l~~~~~~L~pgG~l~~~~~~~~------------~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 190 ---PDPWNYIDKCWEALKGGGRFATVCPTTN------------QVQETLKKLQELPFIRIE 235 (277)
T ss_dssp ---SCGGGTHHHHHHHEEEEEEEEEEESSHH------------HHHHHHHHHHHSSEEEEE
T ss_pred ---cCHHHHHHHHHHHcCCCCEEEEEeCCHH------------HHHHHHHHHHHCCCceeE
Confidence 4456799999999999999999986321 123344445557776543
No 170
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.13 E-value=2e-10 Score=117.43 Aligned_cols=101 Identities=19% Similarity=0.152 Sum_probs=82.8
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
...+|||||||+|.++..+++.. +...++++|. +.+++.|++. ..+.+..+|+.. |++++ |+|++..++++|.+
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d 274 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSD 274 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCH
Confidence 34799999999999999999863 3457899999 8888777653 467788888877 88865 99999999888853
Q ss_pred c-HHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 333 K-DGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 333 d-~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
+ ...+|++++++|||||++++.+....
T Consensus 275 ~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 275 QHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 3 34899999999999999999987654
No 171
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.13 E-value=1.6e-10 Score=109.17 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=77.7
Q ss_pred CceEEEECCCCchHHHHhhhcCC----ceeEEEEecCCHHHHHHHHHc----C------CCcEEEeecccCCC----CCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKEL----LTMCIANYEASGSQVQLTLER----G------LPAMIGSFASKQLP----YPS 315 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~----~~~~v~giD~s~~~l~~A~er----g------~~~~~~~~d~~~Lp----f~d 315 (474)
..+|||||||+|.++..+++... ....++++|+++.+++.|+++ + .++.+..+|..... .++
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 160 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKEL 160 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccC
Confidence 37899999999999999988642 235899999999999988765 3 25677778877765 556
Q ss_pred CCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 316 LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 316 ~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
++||+|++.....+ ++.++.++|||||++++..+.
T Consensus 161 ~~fD~I~~~~~~~~-------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGASASE-------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECSBBSS-------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECCchHH-------HHHHHHHhcCCCcEEEEEEcc
Confidence 78999999876443 357889999999999998763
No 172
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.13 E-value=7.9e-11 Score=119.43 Aligned_cols=100 Identities=12% Similarity=0.122 Sum_probs=81.7
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
...+|||||||+|.++..+++.. +...++++|+ +.+++.|++. ..+.+..+|+.. ++++ ||+|++..++++| .
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~-~ 260 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKYILHNW-T 260 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEESCGGGS-C
T ss_pred cCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeehhhccC-C
Confidence 34799999999999999999873 3357999999 9999887654 247777778755 6664 9999999998888 4
Q ss_pred cHH--HHHHHHHhhcCC---CcEEEEEeCCCC
Q 011964 333 KDG--ILLLEVDRVLKP---GGYFVWTSPLTN 359 (474)
Q Consensus 333 d~~--~~L~ei~RvLKP---GG~lvis~~~~~ 359 (474)
+.. .+|++++++||| ||++++.++...
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 455 899999999999 999999987643
No 173
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.12 E-value=2.1e-10 Score=108.06 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=77.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-CC---CCCeeEEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YP---SLSFDMLH 322 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~L-p-f~---d~sFDlVv 322 (474)
+.+|||||||+|.++..+++.......++++|+++.+++.|+++ ++ .+.+..+|+... + ++ .++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 37899999999999999998732246899999999999988765 44 366777776442 1 11 25799999
Q ss_pred eccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 323 CARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 323 ss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
+... ......++.++.++|||||++++.+....
T Consensus 139 ~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 139 IDAD----KQNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp ECSC----GGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred EcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 8643 23446799999999999999999876543
No 174
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.12 E-value=4.3e-10 Score=106.32 Aligned_cols=98 Identities=15% Similarity=0.049 Sum_probs=73.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc---CCCcEEEeecccCCC---CCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---GLPAMIGSFASKQLP---YPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er---g~~~~~~~~d~~~Lp---f~d~sFDlVvss~~l 327 (474)
..+|||+|||+|.++..+++.......++++|+++.+++.++++ ..++.+..+|+.... ..+++||+|++...
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~- 152 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA- 152 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC-
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC-
Confidence 46899999999999999987611124789999999988877654 235677777776521 12358999997643
Q ss_pred ccccccH-HHHHHHHHhhcCCCcEEEEEe
Q 011964 328 VDWDQKD-GILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 328 ~~~~~d~-~~~L~ei~RvLKPGG~lvis~ 355 (474)
. .+. ..++.++.++|||||++++..
T Consensus 153 --~-~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 153 --Q-PTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp --S-TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --C-HhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2 333 355999999999999999983
No 175
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.11 E-value=1.4e-10 Score=121.53 Aligned_cols=117 Identities=15% Similarity=0.082 Sum_probs=83.1
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHH-------HHc----C-
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLT-------LER----G- 298 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A-------~er----g- 298 (474)
......+.+.+....+ .+|||||||+|.++..+++.. ....++|+|+++.+++.| +++ +
T Consensus 228 p~~v~~ml~~l~l~~g--------~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl 298 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKG--------DTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGM 298 (433)
T ss_dssp HHHHHHHHHHTTCCTT--------CEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC
Confidence 3344455555544333 799999999999999999862 124799999999998877 543 4
Q ss_pred --CCcEEEeecccCC--CC--CCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 299 --LPAMIGSFASKQL--PY--PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 299 --~~~~~~~~d~~~L--pf--~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
.++.+..++.... ++ ..++||+|+++.++ +.++...+|.++.++|||||.+++.++..
T Consensus 299 ~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 299 RLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp CCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred CCCceEEEEcCccccccccccccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 2455665543322 22 24689999987554 33566788999999999999999987544
No 176
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.11 E-value=2.1e-10 Score=109.01 Aligned_cols=99 Identities=18% Similarity=0.159 Sum_probs=79.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-CCC--CCCeeEEEecc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYP--SLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~L-pf~--d~sFDlVvss~ 325 (474)
.+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++ .+.+..+++... +.. +++||+|++..
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 789999999999999998873 246899999999999998876 44 367777776653 432 57899999875
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
.. .+...++.++.++|||||.+++.+..+
T Consensus 135 ~~----~~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 135 AK----GQYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp GG----SCHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred CH----HHHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 42 356789999999999999999986543
No 177
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.11 E-value=2.3e-10 Score=107.04 Aligned_cols=100 Identities=12% Similarity=0.077 Sum_probs=77.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-CCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~L-pf~d~sFDlVvss~~ 326 (474)
..+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+..+++... +..++ ||+|++...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 36899999999999999987632146899999999999988765 33 356777776543 55456 999998632
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
..+...++.++.++|||||++++.+..+
T Consensus 136 ----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 136 ----VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp ----TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred ----hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 2456789999999999999999976544
No 178
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.11 E-value=2.4e-10 Score=109.07 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=81.2
Q ss_pred hHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeec
Q 011964 233 YSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFA 307 (474)
Q Consensus 233 ~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d 307 (474)
....+.+.+...++ .+|||||||+|.++..+++... ..++++|+++.+++.|+++ ++ ++.+..+|
T Consensus 79 ~~~~~~~~l~~~~~--------~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 148 (235)
T 1jg1_A 79 MVAIMLEIANLKPG--------MNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGD 148 (235)
T ss_dssp HHHHHHHHHTCCTT--------CCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred HHHHHHHhcCCCCC--------CEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC
Confidence 44455555554443 6899999999999999998742 5799999999999998875 33 45666666
Q ss_pred ccCCCCCCC-CeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 308 SKQLPYPSL-SFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 308 ~~~Lpf~d~-sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
. ..+++++ .||+|++..++.++. .++.++|||||.+++..+..
T Consensus 149 ~-~~~~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 149 G-SKGFPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp G-GGCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEECSS
T ss_pred c-ccCCCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEecC
Confidence 5 4556554 499999987755442 37899999999999988643
No 179
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.10 E-value=3.7e-10 Score=107.60 Aligned_cols=94 Identities=18% Similarity=0.162 Sum_probs=77.4
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+|||+|||+|.++..+++. ...++++|+++.+++.|+++ ++ ++.+...|.....+++++||+|++..
T Consensus 93 ~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~--- 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV--- 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS---
T ss_pred CEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC---
Confidence 78999999999999999987 35899999999999998875 43 46677777766543677899999742
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+++..++.++.++|||||.+++..+.
T Consensus 167 ---~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 167 ---REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp ---SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ---cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 35567999999999999999999864
No 180
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.10 E-value=2.6e-10 Score=109.84 Aligned_cols=104 Identities=14% Similarity=-0.011 Sum_probs=76.4
Q ss_pred CceEEEECCCCchHHHHhhhcC-CceeEEEEecCCHHHHHHHHHc---C----C--C-----------------------
Q 011964 254 VRTILDIGCGYGSFGAHLFSKE-LLTMCIANYEASGSQVQLTLER---G----L--P----------------------- 300 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g-~~~~~v~giD~s~~~l~~A~er---g----~--~----------------------- 300 (474)
..+|||+|||+|.++..+++.. .....++++|+++.+++.|+++ . + .
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAA 131 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhh
Confidence 4689999999999999998761 1346899999999999998854 1 1 1
Q ss_pred --cE-------------EEeecccCCCC-----CCCCeeEEEecccccccc--------ccHHHHHHHHHhhcCCCcEEE
Q 011964 301 --AM-------------IGSFASKQLPY-----PSLSFDMLHCARCGVDWD--------QKDGILLLEVDRVLKPGGYFV 352 (474)
Q Consensus 301 --~~-------------~~~~d~~~Lpf-----~d~sFDlVvss~~l~~~~--------~d~~~~L~ei~RvLKPGG~lv 352 (474)
+. +...|...... ..++||+|+|+...+... .....++.++.++|||||+++
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 211 (250)
T 1o9g_A 132 RRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIA 211 (250)
T ss_dssp HHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEE
Confidence 33 66677655321 345899999985533321 223489999999999999999
Q ss_pred EEeCC
Q 011964 353 WTSPL 357 (474)
Q Consensus 353 is~~~ 357 (474)
++...
T Consensus 212 ~~~~~ 216 (250)
T 1o9g_A 212 VTDRS 216 (250)
T ss_dssp EEESS
T ss_pred EeCcc
Confidence 96543
No 181
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.09 E-value=2.2e-10 Score=105.91 Aligned_cols=96 Identities=15% Similarity=0.109 Sum_probs=72.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCc-eeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC---------------------
Q 011964 255 RTILDIGCGYGSFGAHLFSKELL-TMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP--------------------- 312 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~-~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp--------------------- 312 (474)
.+|||||||+|.++..++++... ...++++|+++.+ ....+.+..+|+...+
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~ 97 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYK 97 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTTTSSCCC-----------CHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccchhhhhhccccccccccchhhHHH
Confidence 68999999999999999987321 3689999999831 1124667777877776
Q ss_pred ----CCCCCeeEEEecccccccc----ccH-------HHHHHHHHhhcCCCcEEEEEeCC
Q 011964 313 ----YPSLSFDMLHCARCGVDWD----QKD-------GILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 313 ----f~d~sFDlVvss~~l~~~~----~d~-------~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+++++||+|++..+ .++. .+. ..++.++.++|||||.|++..+.
T Consensus 98 ~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 98 LKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 57789999999865 3331 121 13789999999999999997653
No 182
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.09 E-value=1.7e-10 Score=108.74 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=78.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCC-C-CC----CCCeeEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQL-P-YP----SLSFDML 321 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~L-p-f~----d~sFDlV 321 (474)
..+|||||||+|..+..+++.-.....++++|+++.+++.|+++ ++. +.+..+++... + +. .++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 36899999999999999998622246899999999999988765 443 66777776432 2 11 1789999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 322 vss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
++... ..+...++.++.++|||||++++.+..+.
T Consensus 145 ~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 145 YIDAD----KANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EECSC----GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred EECCC----HHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 96532 24567799999999999999999887653
No 183
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.08 E-value=5.3e-10 Score=110.18 Aligned_cols=99 Identities=14% Similarity=0.054 Sum_probs=74.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecC-CHHHHHHHHHcC---------C------CcEEEeecccCCC--C--
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEA-SGSQVQLTLERG---------L------PAMIGSFASKQLP--Y-- 313 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~-s~~~l~~A~erg---------~------~~~~~~~d~~~Lp--f-- 313 (474)
..+|||||||+|.++..+++.+. ..|+++|+ ++.+++.|+++. + ++.+...+..+.. +
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 36899999999999999988753 48999999 899998887642 1 2344433322211 1
Q ss_pred --CCCCeeEEEeccccccccccHHHHHHHHHhhcC---C--CcEEEEEe
Q 011964 314 --PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLK---P--GGYFVWTS 355 (474)
Q Consensus 314 --~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLK---P--GG~lvis~ 355 (474)
++++||+|+++.++++. .+...++.++.++|+ | ||.+++..
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~-~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFH-QAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHSCSSBSEEEEESCCSCG-GGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred hccCCCCCEEEEeCcccCh-HHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 45789999998886654 677889999999999 9 99877754
No 184
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.08 E-value=8e-10 Score=110.16 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=75.7
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----------CCcEEEeecccCC-CCCCCCeeEE
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQL-PYPSLSFDML 321 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----------~~~~~~~~d~~~L-pf~d~sFDlV 321 (474)
.+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- .++.+..+|+... +..+++||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 35799999999999999999872 3468999999999999998751 2466777776543 4456799999
Q ss_pred EeccccccccccH----HHHHHHHHhhcCCCcEEEEEeC
Q 011964 322 HCARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 322 vss~~l~~~~~d~----~~~L~ei~RvLKPGG~lvis~~ 356 (474)
++... .++.... ..+++++.++|||||++++...
T Consensus 162 i~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 99643 2322221 5799999999999999999763
No 185
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.08 E-value=4.1e-10 Score=114.39 Aligned_cols=102 Identities=18% Similarity=0.034 Sum_probs=81.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.+|||+|||+|.++..++........++|+|+++.+++.|+++ ++ .+.+...|+..++.+.++||+|+++-....
T Consensus 205 ~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~ 284 (354)
T 3tma_A 205 MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGL 284 (354)
T ss_dssp CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC
T ss_pred CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCcC
Confidence 7899999999999999988631235799999999999988865 44 578889999999888888999999643211
Q ss_pred c-c------ccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 330 W-D------QKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 330 ~-~------~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. . .....++.++.++|||||.+++.++
T Consensus 285 r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 285 RLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp ----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred ccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 1 1 1125789999999999999999886
No 186
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.08 E-value=1.7e-10 Score=113.84 Aligned_cols=106 Identities=14% Similarity=0.099 Sum_probs=76.7
Q ss_pred CCceEEEECCCC--chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC-----CcEEEeecccCCC----CC--CCCee
Q 011964 253 GVRTILDIGCGY--GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-----PAMIGSFASKQLP----YP--SLSFD 319 (474)
Q Consensus 253 ~~~~VLDIGCGt--G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~-----~~~~~~~d~~~Lp----f~--d~sFD 319 (474)
+.++|||||||+ +.++..++++......|+++|.|+.|++.|+++-. .+.+..+|+.+++ .+ .++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 357999999997 44555555442234689999999999999987621 3667888877652 11 34566
Q ss_pred -----EEEecccccccccc---HHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 320 -----MLHCARCGVDWDQK---DGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 320 -----lVvss~~l~~~~~d---~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
.|+++.+ +||..+ +..+++++.++|+|||+|++++....
T Consensus 158 ~~~p~av~~~av-LH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 158 LTRPVALTVIAI-VHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TTSCCEEEEESC-GGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cCCcchHHhhhh-HhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 4777666 555454 46899999999999999999987643
No 187
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.07 E-value=3e-10 Score=114.42 Aligned_cols=96 Identities=18% Similarity=0.096 Sum_probs=73.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----------------CCcEEEeecccCC--CCCCC
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------------LPAMIGSFASKQL--PYPSL 316 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----------------~~~~~~~~d~~~L--pf~d~ 316 (474)
.+|||+|||+|.++..+++.......++++|+++.+++.|+++. .++.+..+|+... +++++
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 79999999999999999886212358999999999999988641 2567777887776 56778
Q ss_pred CeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 317 SFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 317 sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+||+|++... ++..++.++.++|||||.+++..+
T Consensus 187 ~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 187 TFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred CeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9999998532 223489999999999999999886
No 188
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.07 E-value=4.5e-10 Score=106.40 Aligned_cols=96 Identities=20% Similarity=0.230 Sum_probs=74.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCc-----eeEEEEecCCHHHHHHHHHcC----------CCcEEEeecccCCCCCC-CC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELL-----TMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQLPYPS-LS 317 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~-----~~~v~giD~s~~~l~~A~erg----------~~~~~~~~d~~~Lpf~d-~s 317 (474)
..+|||||||+|.++..+++.... ...++++|+++.+++.|+++. .++.+...|... ++++ ++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 163 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAP 163 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCS
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCC
Confidence 368999999999999999875110 137999999999999887651 256677777766 5555 78
Q ss_pred eeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 318 FDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 318 FDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
||+|++...+.+. +.++.++|||||++++....
T Consensus 164 fD~I~~~~~~~~~-------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 164 YNAIHVGAAAPDT-------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEEECSCBSSC-------CHHHHHTEEEEEEEEEEESC
T ss_pred ccEEEECCchHHH-------HHHHHHHhcCCCEEEEEEec
Confidence 9999998775443 36899999999999998764
No 189
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.06 E-value=8e-10 Score=111.98 Aligned_cols=125 Identities=10% Similarity=0.009 Sum_probs=87.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC---cEEEeecccCCCC----CCCCeeEEEe
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQLPY----PSLSFDMLHC 323 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~---~~~~~~d~~~Lpf----~d~sFDlVvs 323 (474)
.+|||+|||+|.++..++..+. .++++|+|+.+++.|+++ ++. +.+..+|+..+.. .+++||+|++
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 6899999999999999998753 899999999999988765 443 6777777665431 1568999998
Q ss_pred cccc---------ccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEE
Q 011964 324 ARCG---------VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELV 388 (474)
Q Consensus 324 s~~l---------~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~ 388 (474)
.-.. .++..+...++.++.++|||||+|++........ . .......++..+...+++..
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~----~--~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRA----S--FYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTS----C--HHHHHHHHHHHTTTSCSEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCC----C--HHHHHHHHHHHHHHcCCeEE
Confidence 5321 1222345689999999999999988766543221 1 11223344445556666543
No 190
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.06 E-value=2.8e-09 Score=108.50 Aligned_cols=133 Identities=16% Similarity=0.103 Sum_probs=96.7
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC-----CCcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-----LPAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg-----~~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
...+|||||||+|.++..++++. +...++..|. +.+++.|+++. -.+.+..+|+...|++ .+|+|++..++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeec
Confidence 34789999999999999999884 4567777886 77888887652 2467788887666655 47999999998
Q ss_pred ccccccH-HHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHH---HH----------HHHHHHHHHHHhhCceEEe
Q 011964 328 VDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE---NQ----------KRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 328 ~~~~~d~-~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e---~~----------~~w~~~~~la~~l~W~~~~ 389 (474)
++|.++. ..+|+++++.|+|||.+++.+.........+... .. ..-.+++.++++.||+.+.
T Consensus 255 h~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEE
T ss_pred ccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 8885432 4789999999999999999998664322111110 00 0124557788888988765
No 191
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.05 E-value=1.6e-10 Score=125.12 Aligned_cols=101 Identities=15% Similarity=0.050 Sum_probs=82.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----C-CCcEEEeecccCC--CCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQL--PYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g-~~~~~~~~d~~~L--pf~d~sFDlVvss~~ 326 (474)
+.+|||||||.|.++..|++.| ..|+|+|.++.+++.|+.+ + +++.+.+++++++ ++++++||+|+|..+
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 4689999999999999999997 4799999999999988754 3 5678888888887 577889999999999
Q ss_pred cccccccHH--HHHHHHHhhcCCCcEEEEEeCCC
Q 011964 327 GVDWDQKDG--ILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 327 l~~~~~d~~--~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
++|+ +++. ..+..+.+.|+++|..++.....
T Consensus 144 ~ehv-~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 144 FHHI-VHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHH-HHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hhcC-CCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 7777 4444 34567788899988877766544
No 192
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.05 E-value=1.7e-09 Score=109.76 Aligned_cols=101 Identities=17% Similarity=0.116 Sum_probs=77.9
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccCC--CCCCCCeeEE
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQL--PYPSLSFDML 321 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------~~~~~~~~d~~~L--pf~d~sFDlV 321 (474)
.+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++. .++.+..+|+... .+++++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 34799999999999999999872 3468999999999999998752 2467777776553 2456799999
Q ss_pred Eecccccccc-cc---HHHHHHHHHhhcCCCcEEEEEe
Q 011964 322 HCARCGVDWD-QK---DGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 322 vss~~l~~~~-~d---~~~~L~ei~RvLKPGG~lvis~ 355 (474)
++... .++. .+ ...+++++.++|||||.|++..
T Consensus 199 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 98643 2221 11 3679999999999999999974
No 193
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.03 E-value=3.7e-10 Score=119.99 Aligned_cols=97 Identities=22% Similarity=0.219 Sum_probs=77.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||||||+|.++..+++.+ ...|+++|+++ +++.|+++ ++ .+.+..+++.+++++ ++||+|++....
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 234 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCH
T ss_pred CCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCch
Confidence 3799999999999999998864 35899999998 88877654 44 477888888887776 489999998665
Q ss_pred cccc-ccHHHHHHHHHhhcCCCcEEEEE
Q 011964 328 VDWD-QKDGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 328 ~~~~-~d~~~~L~ei~RvLKPGG~lvis 354 (474)
+++. ++....+.++.++|||||++++.
T Consensus 235 ~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 235 YMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred HhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5553 23346778999999999999853
No 194
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.03 E-value=1.9e-09 Score=102.98 Aligned_cols=100 Identities=18% Similarity=0.157 Sum_probs=76.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccC-CC--------------C
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQ-LP--------------Y 313 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~-Lp--------------f 313 (474)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ +.. +.+..++... ++ |
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f 141 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDF 141 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccc
Confidence 7899999999999999988732236899999999999988875 442 5566666433 12 3
Q ss_pred CC--CCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 314 PS--LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 314 ~d--~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
++ ++||+|++... ..+...++.++.++|||||++++.+..+
T Consensus 142 ~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 142 AFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp CCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred cCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 33 78999998743 2344679999999999999999987544
No 195
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.03 E-value=1.1e-10 Score=115.51 Aligned_cols=96 Identities=17% Similarity=0.138 Sum_probs=71.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC-------CcEEE--eecccCCCCCCCCeeEEEec
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------PAMIG--SFASKQLPYPSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~-------~~~~~--~~d~~~Lpf~d~sFDlVvss 324 (474)
..+|||||||+|.++..++++ ..|+++|+++ |+..++++.. ++.+. .+|+..+| +++||+|+|.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd 155 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCD 155 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEEC
T ss_pred CCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEEC
Confidence 478999999999999999987 3689999998 6443433322 45677 78888766 6799999997
Q ss_pred ccccccc---ccHH---HHHHHHHhhcCCCc--EEEEEeCC
Q 011964 325 RCGVDWD---QKDG---ILLLEVDRVLKPGG--YFVWTSPL 357 (474)
Q Consensus 325 ~~l~~~~---~d~~---~~L~ei~RvLKPGG--~lvis~~~ 357 (474)
.+ .... .+.. .+|.++.++||||| .|++..+.
T Consensus 156 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 156 IG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 65 2211 1111 37999999999999 99997765
No 196
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.03 E-value=1.8e-09 Score=99.97 Aligned_cols=94 Identities=7% Similarity=0.018 Sum_probs=72.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
..+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++..++.+..+|+..+| ++||+|+++..++++...
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~ 126 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKH 126 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC------
T ss_pred CCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCc
Confidence 4789999999999999998874 24799999999999999987556788888888865 689999999775555321
Q ss_pred -HHHHHHHHHhhcCCCcEEEEE
Q 011964 334 -DGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 334 -~~~~L~ei~RvLKPGG~lvis 354 (474)
...+++++.+++ |+.+++.
T Consensus 127 ~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 127 SDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp -CHHHHHHHHHHE--EEEEEEE
T ss_pred hhHHHHHHHHHhc--CcEEEEE
Confidence 247899999998 5544443
No 197
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.02 E-value=1.4e-10 Score=114.02 Aligned_cols=96 Identities=16% Similarity=0.105 Sum_probs=70.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC-------CcEEE--eecccCCCCCCCCeeEEEec
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------PAMIG--SFASKQLPYPSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~-------~~~~~--~~d~~~Lpf~d~sFDlVvss 324 (474)
..+|||||||+|.++..+++. ..|+++|+++ |+..++++.. ++.+. .+|+..++ +++||+|+|.
T Consensus 75 g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd 147 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCD 147 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEe
Confidence 378999999999999999887 3689999998 5433322221 45666 77887765 6799999997
Q ss_pred ccccccc---ccHH---HHHHHHHhhcCCCc--EEEEEeCC
Q 011964 325 RCGVDWD---QKDG---ILLLEVDRVLKPGG--YFVWTSPL 357 (474)
Q Consensus 325 ~~l~~~~---~d~~---~~L~ei~RvLKPGG--~lvis~~~ 357 (474)
.+ .+.. .+.. .+|.++.++||||| .|++..+.
T Consensus 148 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 148 VG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred Cc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 55 2211 1111 37899999999999 99998765
No 198
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.02 E-value=7.3e-10 Score=107.31 Aligned_cols=101 Identities=13% Similarity=0.037 Sum_probs=77.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-C-----CCCCeeE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-Y-----PSLSFDM 320 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~L-p-f-----~d~sFDl 320 (474)
+.+|||||||+|..+..+++.-.....++++|+++.+++.|+++ ++ .+.+..+++... + + ++++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 37899999999999999988622236899999999999988765 44 356776766542 3 2 2578999
Q ss_pred EEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 321 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 321 Vvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
|++... ..+...++.++.++|||||++++.+..+
T Consensus 160 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 160 IFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp EEECSC----STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred EEEcCc----hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 998643 2455789999999999999999876544
No 199
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.02 E-value=2.2e-09 Score=102.52 Aligned_cols=102 Identities=14% Similarity=0.089 Sum_probs=78.1
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccC----CCCCC--CCeeEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ----LPYPS--LSFDML 321 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~----Lpf~d--~sFDlV 321 (474)
..+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+..+++.. ++..+ ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 36899999999999999988632235899999999999988765 44 35666666432 33444 789999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 322 vss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
++... ..+...++.++.++|||||++++.+..+.
T Consensus 153 ~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 153 FIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EECSC----GGGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 97643 24557799999999999999999876543
No 200
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.01 E-value=3.4e-09 Score=104.03 Aligned_cols=98 Identities=14% Similarity=0.090 Sum_probs=79.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
..+|||+|||+|.++..+++... ...++++|+++.+++.|+++ ++ ++.+..+|+..++. +++||+|++....
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH- 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS-
T ss_pred CCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc-
Confidence 37899999999999999998732 35899999999999988764 44 46678888887744 6789999987542
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+...++.++.++|||||.++++....
T Consensus 197 ----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 44568999999999999999988653
No 201
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.01 E-value=1.2e-10 Score=112.52 Aligned_cols=102 Identities=7% Similarity=-0.040 Sum_probs=78.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-CCC-----CCCeeEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYP-----SLSFDML 321 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~L-pf~-----d~sFDlV 321 (474)
+.+|||||||+|..+..+++.-.....|+++|+++.+++.|+++ ++ ++.+..+|+... +.. +++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 37899999999999999998532246899999999988766554 44 467777776553 221 5789999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 322 vss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
++... ..+...++.++.++|||||++++.+..+.
T Consensus 141 ~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 141 FIDAD----KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp EEESC----GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred EEcCC----hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 98643 24556799999999999999999876553
No 202
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.01 E-value=9.7e-10 Score=110.68 Aligned_cols=100 Identities=15% Similarity=0.071 Sum_probs=77.3
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC-----CCcEEEeecccCC--CCCCCCeeEEEecccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-----LPAMIGSFASKQL--PYPSLSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg-----~~~~~~~~d~~~L--pf~d~sFDlVvss~~l 327 (474)
.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- .++.+..+|+... .+++++||+|++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~- 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF- 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-
Confidence 489999999999999999842 2358999999999999999863 2466777776554 356789999998633
Q ss_pred cccc-c---cHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 328 VDWD-Q---KDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 328 ~~~~-~---d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.+.. . ....++++++++|||||+|++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2221 1 125799999999999999998764
No 203
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.00 E-value=4.5e-10 Score=114.11 Aligned_cols=99 Identities=12% Similarity=0.120 Sum_probs=80.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
..+|||||||+|.++..++++. ....++++|+ +.+++.|++. ..+.+..+|+.. +++ +||+|++..++++| .+
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~-~d 266 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDW-ND 266 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGS-CH
T ss_pred CCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCC-CH
Confidence 4789999999999999999874 3457889999 6888776642 246777778766 776 49999999997777 55
Q ss_pred HH--HHHHHHHhhcCC---CcEEEEEeCCCC
Q 011964 334 DG--ILLLEVDRVLKP---GGYFVWTSPLTN 359 (474)
Q Consensus 334 ~~--~~L~ei~RvLKP---GG~lvis~~~~~ 359 (474)
.. .+|++++++||| ||++++.++...
T Consensus 267 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 267 EQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp HHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 44 899999999999 999999987543
No 204
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.00 E-value=4e-09 Score=110.92 Aligned_cols=106 Identities=16% Similarity=0.141 Sum_probs=81.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC--CCCCCeeEEEec---
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCA--- 324 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lp--f~d~sFDlVvss--- 324 (474)
.+|||+|||+|..+..+++.......++++|+++.+++.++++ ++ ++.+..+|+..++ +++++||+|++.
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc 340 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPC 340 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCC
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCC
Confidence 7899999999999999988622225899999999999888765 55 5677888887776 666789999962
Q ss_pred --cccccccccH----------------HHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 325 --RCGVDWDQKD----------------GILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 325 --~~l~~~~~d~----------------~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
...++..++. ..+|.++.++|||||.+++++.....
T Consensus 341 sg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 341 TSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp CCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 1112211221 46899999999999999999876653
No 205
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.99 E-value=1e-09 Score=112.98 Aligned_cols=95 Identities=22% Similarity=0.239 Sum_probs=74.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHH----cCC--CcEEEeecccCCCCCCCCeeEEEecccc-
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE----RGL--PAMIGSFASKQLPYPSLSFDMLHCARCG- 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~e----rg~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l- 327 (474)
.+|||||||+|.++...++.|. ..|+++|.|+ |++.|++ +++ .+.+..++++.+.++ ..||+|+|....
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA--~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGA--RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CEEEEeCCCccHHHHHHHHhCC--CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 6899999999999998888864 5799999985 6666654 354 467788888888887 579999985321
Q ss_pred -ccccccHHHHHHHHHhhcCCCcEEEE
Q 011964 328 -VDWDQKDGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 328 -~~~~~d~~~~L~ei~RvLKPGG~lvi 353 (474)
+........++....|+|||||.++.
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 22334557888999999999999874
No 206
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.99 E-value=2.1e-09 Score=108.06 Aligned_cols=100 Identities=13% Similarity=0.050 Sum_probs=74.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccC-CCCCCCCeeEEEe
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------~~~~~~~~d~~~-Lpf~d~sFDlVvs 323 (474)
+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- .++.+..+|+.. ++..+++||+|++
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4799999999999999999863 3468999999999999998762 235667666654 3335678999998
Q ss_pred ccccccccccH----HHHHHHHHhhcCCCcEEEEEe
Q 011964 324 ARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 324 s~~l~~~~~d~----~~~L~ei~RvLKPGG~lvis~ 355 (474)
... .++.+.. ..+++++.++|||||.+++..
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 643 3332221 578999999999999999976
No 207
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.98 E-value=1.1e-09 Score=109.93 Aligned_cols=101 Identities=14% Similarity=0.110 Sum_probs=78.5
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----------CCcEEEeecccC-CCCCCCCeeEE
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQ-LPYPSLSFDML 321 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----------~~~~~~~~d~~~-Lpf~d~sFDlV 321 (474)
.+.+|||||||+|.++..+++.. ...+++++|+++.+++.|+++- .++.+..+|+.. ++..+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 34799999999999999999872 3468999999999999998652 246677777655 34456789999
Q ss_pred Eeccccccc---cc--c--HHHHHHHHHhhcCCCcEEEEEe
Q 011964 322 HCARCGVDW---DQ--K--DGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 322 vss~~l~~~---~~--d--~~~~L~ei~RvLKPGG~lvis~ 355 (474)
++... .++ .+ . ...+++++.++|||||.+++..
T Consensus 156 i~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99754 333 11 1 2579999999999999999975
No 208
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.98 E-value=3e-09 Score=105.89 Aligned_cols=101 Identities=15% Similarity=0.047 Sum_probs=76.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccC-CCCCCCCeeEEEe
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------~~~~~~~~d~~~-Lpf~d~sFDlVvs 323 (474)
+.+|||||||+|.++..+++.. ...+++++|+++.+++.|+++- .++.+..+|+.. ++..+++||+|++
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4799999999999999999872 2468999999999999998752 246677777554 3445678999998
Q ss_pred ccccccccc-----cHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 324 ARCGVDWDQ-----KDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 324 s~~l~~~~~-----d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
... .++.. ....+++++.++|||||.+++...
T Consensus 170 d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 170 DST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 532 23111 225799999999999999999754
No 209
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.98 E-value=1.1e-09 Score=107.54 Aligned_cols=106 Identities=17% Similarity=0.094 Sum_probs=80.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCC----CCCCeeEEEecc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPY----PSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf----~d~sFDlVvss~ 325 (474)
.+|||+|||+|..+..+++.......++++|+++.+++.++++ ++ ++.+...|+..++. .+++||+|++.-
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~ 164 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDA 164 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcC
Confidence 7899999999999999987521225899999999999888765 54 56777778776654 367899999862
Q ss_pred ccc-----------------cccccHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 326 CGV-----------------DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 326 ~l~-----------------~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
... ........+|.++.++|||||.+++++.....
T Consensus 165 Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 165 PCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEV 216 (274)
T ss_dssp CCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCT
T ss_pred CCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCCh
Confidence 100 01134568999999999999999999876543
No 210
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.97 E-value=2.5e-09 Score=107.80 Aligned_cols=102 Identities=15% Similarity=0.125 Sum_probs=77.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccC-CCCCCCCeeEEEe
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------~~~~~~~~d~~~-Lpf~d~sFDlVvs 323 (474)
+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- .++.+..+|+.. ++..+++||+|++
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4789999999999999999762 3468999999999999998762 235667666544 2334578999998
Q ss_pred ccccccccc--c--HHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 324 ARCGVDWDQ--K--DGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 324 s~~l~~~~~--d--~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
... .++.. . ...+++++.++|||||++++....
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 642 22211 1 167999999999999999997643
No 211
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.97 E-value=3.2e-09 Score=104.99 Aligned_cols=103 Identities=14% Similarity=0.115 Sum_probs=78.3
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccCC-CCCCCCeeEEE
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQL-PYPSLSFDMLH 322 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------~~~~~~~~d~~~L-pf~d~sFDlVv 322 (474)
.+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- .++.+..+|+... +..+++||+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 34799999999999999998773 3468999999999999998762 2456677776542 22367899999
Q ss_pred eccccccccccH----HHHHHHHHhhcCCCcEEEEEeCC
Q 011964 323 CARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 323 ss~~l~~~~~d~----~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+... .++.... ..+++++.++|||||.+++....
T Consensus 157 ~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 157 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 8543 3332211 57999999999999999998643
No 212
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.97 E-value=1.3e-09 Score=109.00 Aligned_cols=102 Identities=13% Similarity=0.100 Sum_probs=76.7
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc---------CCCcEEEeecccC-CCCCCCCeeEEE
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---------GLPAMIGSFASKQ-LPYPSLSFDMLH 322 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er---------g~~~~~~~~d~~~-Lpf~d~sFDlVv 322 (474)
.+.+|||||||+|.++..++++. ....++++|+++.+++.|+++ ..++.+...|+.. ++..+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 34799999999999999999873 346899999999999999875 2346677777654 344567999999
Q ss_pred eccccccccc----cHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 323 CARCGVDWDQ----KDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 323 ss~~l~~~~~----d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+... .++.+ ....+++++.++|||||.+++...
T Consensus 174 ~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 174 TDSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EECC------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 8643 33221 124689999999999999999763
No 213
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.96 E-value=3.3e-09 Score=100.07 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=77.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-CCC----CCeeEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YPS----LSFDML 321 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~L-p-f~d----~sFDlV 321 (474)
..+|||||||+|.++..+++.......++++|+++.+++.|+++ ++ .+.+..+++... + +++ ++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 37899999999999999988632246899999999999988765 43 466776665432 1 211 689999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 322 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 322 vss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
++... ..+...++.++.++|||||++++.+..+
T Consensus 150 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 150 VVDAD----KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp EECSC----STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 98643 2445679999999999999999987554
No 214
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.96 E-value=3.7e-09 Score=104.13 Aligned_cols=102 Identities=11% Similarity=0.094 Sum_probs=78.1
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccC-CCCCCCCeeEEE
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 322 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------~~~~~~~~d~~~-Lpf~d~sFDlVv 322 (474)
.+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- .++.+..+|+.. ++..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35799999999999999999872 2468999999999999998752 246677777654 344467899999
Q ss_pred ecccccccccc----HHHHHHHHHhhcCCCcEEEEEeC
Q 011964 323 CARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 323 ss~~l~~~~~d----~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+... .++... ...+++++.++|||||.+++...
T Consensus 154 ~d~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESCS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8643 333211 25799999999999999999854
No 215
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.96 E-value=1.8e-10 Score=110.86 Aligned_cols=101 Identities=14% Similarity=0.153 Sum_probs=69.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCC---CCC---CCCeeEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQL---PYP---SLSFDML 321 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~L---pf~---d~sFDlV 321 (474)
..+|||+|||+|.++..++++. ....++++|+++.|++.|+++ ++. +.+..+|+... +++ +++||+|
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 4689999999999999988762 236899999999999988765 443 67777776552 455 3689999
Q ss_pred Eecccccccc--------------ccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 322 HCARCGVDWD--------------QKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 322 vss~~l~~~~--------------~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
+++...++.. .....++.+++|+|||||.+.+.+
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 9985433221 011245678899999999877653
No 216
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.96 E-value=9.3e-09 Score=105.40 Aligned_cols=123 Identities=13% Similarity=0.110 Sum_probs=89.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccC-CCC-CCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ-LPY-PSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~-Lpf-~d~sFDlVvss~~ 326 (474)
..+|||+| |+|.++..++..+. ...++++|+++.|++.|+++ ++ ++.+..+|+.. +|. .+++||+|+++..
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 47899999 99999999987742 35899999999999998866 55 67788888887 764 4578999999854
Q ss_pred cccccccHHHHHHHHHhhcCCCcEE-EEEeCCCCchhhhhhHHHHHHHHHHHHHHH-hhCceEE
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYF-VWTSPLTNPQAFLRNKENQKRWNFVRDFVE-NLCWELV 388 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~l-vis~~~~~~~~~~~~~e~~~~w~~~~~la~-~l~W~~~ 388 (474)
++.. ....++.++.++|||||.+ +++..... .....|..+..+.. ..++...
T Consensus 251 -~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~g~~~~ 304 (373)
T 2qm3_A 251 -ETLE-AIRAFVGRGIATLKGPRCAGYFGITRRE--------SSLDKWREIQKLLLNEFNVVIT 304 (373)
T ss_dssp -SSHH-HHHHHHHHHHHTBCSTTCEEEEEECTTT--------CCHHHHHHHHHHHHHTSCCEEE
T ss_pred -CchH-HHHHHHHHHHHHcccCCeEEEEEEecCc--------CCHHHHHHHHHHHHHhcCcchh
Confidence 3221 2478999999999999944 55543211 11124555666666 6776654
No 217
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.96 E-value=3.7e-09 Score=101.45 Aligned_cols=101 Identities=11% Similarity=-0.004 Sum_probs=77.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-C-----CCCCeeE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-Y-----PSLSFDM 320 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~L-p-f-----~d~sFDl 320 (474)
+.+|||||||+|..+..+++.-.....++++|+++.+++.|+++ ++ .+.+..+++... + + ++++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 37899999999999999987622246899999999999988764 54 356666665442 2 2 2578999
Q ss_pred EEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 321 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 321 Vvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
|++... ..+...++.++.++|||||++++.+..+
T Consensus 151 I~~d~~----~~~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 151 GFVDAD----KPNYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp EEECSC----GGGHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred EEECCc----hHHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 997632 2455789999999999999999876543
No 218
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.95 E-value=2.3e-08 Score=92.78 Aligned_cols=117 Identities=11% Similarity=0.044 Sum_probs=84.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++ ++++.+..+|+..++ ++||+|+++...+.
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGS 124 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCcc
Confidence 47899999999999999998853 4799999999999999876 346778888888764 48999999866444
Q ss_pred cc-ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 330 WD-QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 330 ~~-~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
.. .....++.++.++| ||.+++.... . .....+...++..+|+...
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~~~~~~~~~---------~---~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DVVYSIHLAK---------P---EVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SEEEEEEECC---------H---HHHHHHHHHHHHTTEEEEE
T ss_pred ccCCchHHHHHHHHHhc--CcEEEEEeCC---------c---CCHHHHHHHHHHCCCeEEE
Confidence 32 22357899999998 6655544211 1 1123345566777776543
No 219
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.95 E-value=7.6e-10 Score=101.64 Aligned_cols=98 Identities=16% Similarity=0.075 Sum_probs=69.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCce--------eEEEEecCCHHHHHHHHHcCCCcEEE-eecccCCC--------CCCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLT--------MCIANYEASGSQVQLTLERGLPAMIG-SFASKQLP--------YPSL 316 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~--------~~v~giD~s~~~l~~A~erg~~~~~~-~~d~~~Lp--------f~d~ 316 (474)
..+|||||||+|.++..+++..... ..++++|+++.+ ....+.+. .+|....+ ++++
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCHHHHHHHHHhcCCC
Confidence 3789999999999999999872111 579999999832 01235556 66654432 3456
Q ss_pred CeeEEEeccccc---cccccH-------HHHHHHHHhhcCCCcEEEEEeCC
Q 011964 317 SFDMLHCARCGV---DWDQKD-------GILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 317 sFDlVvss~~l~---~~~~d~-------~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+||+|+|..+.. ++..+. ..++.++.++|||||.|++.++.
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 899999865322 222222 47899999999999999998764
No 220
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.93 E-value=6.8e-09 Score=99.94 Aligned_cols=119 Identities=15% Similarity=0.081 Sum_probs=91.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+|||||||+|.++..+++.+ ....++++|+++.+++.|+++ ++ .+.+..+|......+++.||+|+.....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg 101 (230)
T 3lec_A 23 ARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGG 101 (230)
T ss_dssp EEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCch
Confidence 689999999999999999885 346899999999999998865 44 36777778766655555799988654311
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEeee
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 391 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~~ 391 (474)
.-...+|.+..+.|+++|+|+++... ....++.++...+|....+.
T Consensus 102 ---~lI~~IL~~~~~~l~~~~~lIlqp~~--------------~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 102 ---RLIADILNNDIDKLQHVKTLVLQPNN--------------REDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp ---HHHHHHHHHTGGGGTTCCEEEEEESS--------------CHHHHHHHHHHTTEEEEEEE
T ss_pred ---HHHHHHHHHHHHHhCcCCEEEEECCC--------------ChHHHHHHHHHCCCEEEEEE
Confidence 22356888999999999999998742 13456777888999988765
No 221
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.93 E-value=9.4e-09 Score=105.48 Aligned_cols=118 Identities=15% Similarity=0.027 Sum_probs=86.1
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||+|||+|.++..++..+. ...++|+|+++.|++.|+++ ++ .+.+..+|+..+++++++||+|+++...
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCC
T ss_pred CCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCC
Confidence 37899999999999999998752 23799999999999998865 55 5788899999999888999999997432
Q ss_pred cccc------cc-HHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 328 VDWD------QK-DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 328 ~~~~------~d-~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
.... .+ ...++.++.++| ||.+++.... ...++...+..+|+...
T Consensus 297 g~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~---------------~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 297 GLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE---------------KKAIEEAIAENGFEIIH 348 (373)
T ss_dssp C------CCHHHHHHHHHHHHHHHE--EEEEEEEESC---------------HHHHHHHHHHTTEEEEE
T ss_pred CcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC---------------HHHHHHHHHHcCCEEEE
Confidence 2111 11 256889999999 5555554431 12334466677887654
No 222
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.91 E-value=4.7e-09 Score=103.57 Aligned_cols=99 Identities=13% Similarity=0.057 Sum_probs=74.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------------CCcEEEeecccC-CCCCCCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------------LPAMIGSFASKQ-LPYPSLS 317 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------------~~~~~~~~d~~~-Lpf~d~s 317 (474)
+.+|||||||+|.++..+++. ....++++|+++.+++.|+++- .++.+..+|+.. ++. +++
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 478999999999999999987 3468999999999999998753 234566666543 222 578
Q ss_pred eeEEEeccccccccc--c--HHHHHHHHHhhcCCCcEEEEEeC
Q 011964 318 FDMLHCARCGVDWDQ--K--DGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 318 FDlVvss~~l~~~~~--d--~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
||+|++... .++.. . ...+++++.++|+|||.+++...
T Consensus 153 fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 999998643 33311 1 25789999999999999999753
No 223
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.91 E-value=4e-09 Score=103.36 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=74.3
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccCCCCCCCCeeEEEe
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQLPYPSLSFDMLHC 323 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---------~~~~~~~~d~~~Lpf~d~sFDlVvs 323 (474)
.+.+|||||||+|.++..+++. . .+++++|+++.+++.|+++- ..+.+..+|+.... ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 3479999999999999999887 3 68999999999999887642 24566777776654 78999998
Q ss_pred ccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 324 s~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.. .++..+++++.++|||||.+++...
T Consensus 146 d~------~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 146 LQ------EPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp SS------CCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CC------CChHHHHHHHHHhcCCCcEEEEEcC
Confidence 62 2345599999999999999999753
No 224
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.91 E-value=6.5e-09 Score=102.84 Aligned_cols=98 Identities=17% Similarity=0.232 Sum_probs=73.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCe---eEEEecc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSF---DMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~sF---DlVvss~ 325 (474)
.+|||+|||+|.++..+++. ....++++|+|+.+++.|+++ ++. +.+..+|... +++ ++| |+|+++-
T Consensus 125 ~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNP 200 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECC
T ss_pred CEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcC
Confidence 68999999999999999987 346899999999999998865 443 6777777665 233 478 9999972
Q ss_pred cccc----------ccc--------cHHHHHHHHH-hhcCCCcEEEEEeC
Q 011964 326 CGVD----------WDQ--------KDGILLLEVD-RVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~----------~~~--------d~~~~L~ei~-RvLKPGG~lvis~~ 356 (474)
-... +.+ +...+++++. +.|+|||.+++...
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 2110 111 1126899999 99999999998543
No 225
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.90 E-value=3.1e-09 Score=112.26 Aligned_cols=106 Identities=23% Similarity=0.294 Sum_probs=79.9
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCC-CCCCCeeEEEe----cc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLP-YPSLSFDMLHC----AR 325 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lp-f~d~sFDlVvs----s~ 325 (474)
.+|||+|||+|..+..+++.......|+++|+++.+++.++++ ++.+.+..+|+..++ +.+++||+|++ +.
T Consensus 103 ~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg 182 (464)
T 3m6w_A 103 ERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSG 182 (464)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCCC
T ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcCC
Confidence 7999999999999999987632235799999999999888765 666777777877765 34679999995 21
Q ss_pred c-ccccccc----------------HHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 326 C-GVDWDQK----------------DGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 326 ~-l~~~~~d----------------~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
. .+...++ ...+|.++.++|||||+|++++.....
T Consensus 183 ~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 183 EGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp GGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred ccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 1 1111111 257899999999999999999876554
No 226
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.90 E-value=2e-09 Score=106.52 Aligned_cols=107 Identities=21% Similarity=0.151 Sum_probs=77.8
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC------CCcEEEe
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------LPAMIGS 305 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg------~~~~~~~ 305 (474)
...+.+.+.+...++ .+|||||||+|.++..+++.+ ..++++|+++.|++.++++. .++.+..
T Consensus 15 ~i~~~i~~~~~~~~~--------~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 83 (285)
T 1zq9_A 15 LIINSIIDKAALRPT--------DVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLV 83 (285)
T ss_dssp HHHHHHHHHTCCCTT--------CEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 345566666554433 789999999999999999885 47999999999999988752 2467788
Q ss_pred ecccCCCCCCCCeeEEEeccccccccccHH-HHH--------------HHH--HhhcCCCcEEE
Q 011964 306 FASKQLPYPSLSFDMLHCARCGVDWDQKDG-ILL--------------LEV--DRVLKPGGYFV 352 (474)
Q Consensus 306 ~d~~~Lpf~d~sFDlVvss~~l~~~~~d~~-~~L--------------~ei--~RvLKPGG~lv 352 (474)
+|+..++++ +||+|+++.. +++..+.- .++ +|+ +++|+|||.++
T Consensus 84 ~D~~~~~~~--~fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 84 GDVLKTDLP--FFDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SCTTTSCCC--CCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cceecccch--hhcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 888877776 7999999754 55532211 222 333 37999999873
No 227
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.90 E-value=9.4e-09 Score=99.79 Aligned_cols=119 Identities=15% Similarity=0.093 Sum_probs=90.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+|||||||+|.++..+++.+ ....++++|+++.+++.|+++ ++. +.+..+|......++..||+|+.....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg 101 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG 101 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCch
Confidence 689999999999999999885 356899999999999999876 553 5677777666554444699998653311
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEeee
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 391 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~~ 391 (474)
.-...+|.+..+.|+++|+|+++... ....++.++...+|..+.+.
T Consensus 102 ---~lI~~IL~~~~~~L~~~~~lIlq~~~--------------~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 102 ---TLIRTILEEGAAKLAGVTKLILQPNI--------------AAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp ---HHHHHHHHHTGGGGTTCCEEEEEESS--------------CHHHHHHHHHHHTEEEEEEE
T ss_pred ---HHHHHHHHHHHHHhCCCCEEEEEcCC--------------ChHHHHHHHHHCCCEEEEEE
Confidence 12346889999999999999998632 13456677888899976543
No 228
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.88 E-value=7.3e-10 Score=111.00 Aligned_cols=99 Identities=16% Similarity=0.128 Sum_probs=67.5
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecC----CHHHHHHHHHc--C-CCcEEEee-cccCCCCCCCCeeEEEecc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEA----SGSQVQLTLER--G-LPAMIGSF-ASKQLPYPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~----s~~~l~~A~er--g-~~~~~~~~-d~~~Lpf~d~sFDlVvss~ 325 (474)
..+|||||||+|.++..++++ ..|+++|+ ++.+++.+... + ..+.+..+ |+..+| +++||+|+|..
T Consensus 83 g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~ 156 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDI 156 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECC
T ss_pred CCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECC
Confidence 379999999999999999987 25788888 44333221111 1 13456655 655554 56899999975
Q ss_pred ccc--cccccHH---HHHHHHHhhcCCCcEEEEEeCCC
Q 011964 326 CGV--DWDQKDG---ILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 326 ~l~--~~~~d~~---~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+.. ++..+.. .+|.++.++|||||.|++..+..
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 532 2222222 47899999999999999977643
No 229
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.88 E-value=5.5e-09 Score=109.14 Aligned_cols=105 Identities=15% Similarity=0.181 Sum_probs=81.3
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCC--CCCCCeeEEEec----
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLP--YPSLSFDMLHCA---- 324 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lp--f~d~sFDlVvss---- 324 (474)
.+|||+|||+|..+..+++... ...++++|+++.+++.++++ ++++.+...|+..++ +++++||+|++.
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcs 326 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCS 326 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCC
T ss_pred CeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCC
Confidence 7899999999999999998742 26899999999999887665 667778888887776 666799999962
Q ss_pred c-ccccccccH----------------HHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 325 R-CGVDWDQKD----------------GILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 325 ~-~l~~~~~d~----------------~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
. ..++..++. ..+|.++.++|||||++++++.....
T Consensus 327 g~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 327 ATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp CGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred cccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 1 111111221 37899999999999999999876543
No 230
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.86 E-value=3.8e-09 Score=98.38 Aligned_cols=95 Identities=12% Similarity=-0.009 Sum_probs=69.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCC-----------CCCeeEEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP-----------SLSFDMLH 322 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~-----------d~sFDlVv 322 (474)
..+|||+|||+|.++..++++ ...|+++|+++.. ....+.+..+|+...+.. .++||+|+
T Consensus 26 g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vl 96 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVV 96 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEe
Confidence 379999999999999999988 3589999998742 122567778887775521 14899999
Q ss_pred eccccc---ccccc-------HHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 323 CARCGV---DWDQK-------DGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 323 ss~~l~---~~~~d-------~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
|..... .+..+ ...++.++.++|||||.|++....
T Consensus 97 sd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 97 SDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 863211 11111 246789999999999999987763
No 231
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.85 E-value=1.1e-08 Score=108.69 Aligned_cols=106 Identities=20% Similarity=0.287 Sum_probs=79.5
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCC-CCCCeeEEEec----
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPY-PSLSFDMLHCA---- 324 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf-~d~sFDlVvss---- 324 (474)
.+|||+|||+|..+..+++.-.....|+++|+++.+++.++++ ++ ++.+...|+..++. .+++||.|++.
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcS 198 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCS 198 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCC
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcC
Confidence 7899999999999999998622235799999999999888765 55 46677788777653 56789999972
Q ss_pred cc-cc--------cccc--------cHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 325 RC-GV--------DWDQ--------KDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 325 ~~-l~--------~~~~--------d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
.. .+ +|.. ....+|.++.++|||||+|++++.....
T Consensus 199 g~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~ 251 (479)
T 2frx_A 199 GEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQ 251 (479)
T ss_dssp CGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSS
T ss_pred CcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCc
Confidence 11 11 1111 1246899999999999999999876543
No 232
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.85 E-value=1.8e-08 Score=99.62 Aligned_cols=122 Identities=7% Similarity=0.116 Sum_probs=88.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||+|||+|.++..++..+. ..|+++|+++.+++.++++ ++. +.+..+|+..++. .+.||.|++...
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p- 201 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV- 201 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-
T ss_pred CCEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC-
Confidence 37899999999999999998853 5799999999999888765 553 5677788777653 468999997743
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
.....+|..+.++|||||.+.+.+....... .....+.++.+++..+++...
T Consensus 202 ----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~------~~~~~e~i~~~~~~~g~~v~~ 253 (278)
T 3k6r_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ----CcHHHHHHHHHHHcCCCCEEEEEeeeccccc------chhHHHHHHHHHHHcCCcEEE
Confidence 2234588888999999999988765432211 112234566777888887543
No 233
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.85 E-value=2e-08 Score=96.45 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=87.7
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCC-CeeEEEecccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSL-SFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~--~~~~~~d~~~Lpf~d~-sFDlVvss~~l 327 (474)
.+|||||||+|.++..++..+ ....++++|+++.+++.|+++ ++. +.+..+|... +++.+ .||+|+.....
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~IviaG~G 94 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAGMG 94 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEEEcCCC
Confidence 689999999999999999875 356899999999999988765 553 5666666532 23333 69999865431
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEeee
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 391 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~~~ 391 (474)
- .-...++.+....|+|+|+|+++... ....++.++...+|..+.+.
T Consensus 95 g---~~i~~Il~~~~~~L~~~~~lVlq~~~--------------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 95 G---RLIARILEEGLGKLANVERLILQPNN--------------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp H---HHHHHHHHHTGGGCTTCCEEEEEESS--------------CHHHHHHHHHHTTEEEEEEE
T ss_pred h---HHHHHHHHHHHHHhCCCCEEEEECCC--------------CHHHHHHHHHHCCCEEEEEE
Confidence 1 12356899999999999999996541 12456677888899988764
No 234
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.83 E-value=5.6e-09 Score=107.70 Aligned_cols=124 Identities=11% Similarity=0.083 Sum_probs=88.1
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC---CcEEEeecccC-CCC---CCCCeeEEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQ-LPY---PSLSFDMLH 322 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~---~~~~~~~d~~~-Lpf---~d~sFDlVv 322 (474)
..+|||+|||+|.++..+++.+. ..|+++|+++.+++.|+++ ++ ++.+..+|+.. ++. ...+||+|+
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga--~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGA--MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTB--SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 36899999999999999998752 4899999999999988765 44 56778777655 221 245899999
Q ss_pred eccccc--------cccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCce
Q 011964 323 CARCGV--------DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWE 386 (474)
Q Consensus 323 ss~~l~--------~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~ 386 (474)
+.-... ....+...++.++.++|+|||+++++...... .....++.+...+...+++
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~-------~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM-------TVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-------CHHHHHHHHHHHHTTCCCE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC-------CHHHHHHHHHHHHHHcCCc
Confidence 853321 11122345778889999999999998864332 1123455666667777766
No 235
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.81 E-value=2.4e-08 Score=103.40 Aligned_cols=103 Identities=15% Similarity=0.016 Sum_probs=77.0
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCC-CCCCCCeeEEEeccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL-PYPSLSFDMLHCARCGV 328 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~L-pf~d~sFDlVvss~~l~ 328 (474)
..+|||+|||+|.++..++..+. .|+++|+|+.+++.|+++ ++...+..+|+... +...+.||+|++.-..+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 37899999999999999998863 399999999999988765 66656667776553 22233499999864322
Q ss_pred cc--------cccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 329 DW--------DQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 329 ~~--------~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
.. ..+...++.++.++|||||++++++....
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 11 12335789999999999999998876543
No 236
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.78 E-value=2.1e-08 Score=105.71 Aligned_cols=126 Identities=18% Similarity=0.221 Sum_probs=87.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC-cEEEeecccCCC-CCCCCeeEEEeccc--
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLP-YPSLSFDMLHCARC-- 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~-~~~~~~d~~~Lp-f~d~sFDlVvss~~-- 326 (474)
.+|||+|||+|..+..+++.-.....|+++|+++.+++.++++ ++. +.+...|+..++ +.+++||+|++.--
T Consensus 107 ~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCS 186 (456)
T 3m4x_A 107 EKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCS 186 (456)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCC
T ss_pred CEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCCC
Confidence 7999999999999999987621235799999999999887764 553 566677776664 34578999997321
Q ss_pred ---ccc--------ccc--------cHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceE
Q 011964 327 ---GVD--------WDQ--------KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWEL 387 (474)
Q Consensus 327 ---l~~--------~~~--------d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~ 387 (474)
.+. |.. ....+|.++.++|||||+|++++-..... | .-..++.++++.+|++
T Consensus 187 g~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e------E---ne~vv~~~l~~~~~~l 257 (456)
T 3m4x_A 187 GEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE------E---NEEIISWLVENYPVTI 257 (456)
T ss_dssp CGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG------G---THHHHHHHHHHSSEEE
T ss_pred CccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc------c---CHHHHHHHHHhCCCEE
Confidence 011 100 11267999999999999999998766541 1 1234455666666665
Q ss_pred Ee
Q 011964 388 VS 389 (474)
Q Consensus 388 ~~ 389 (474)
+-
T Consensus 258 ~~ 259 (456)
T 3m4x_A 258 EE 259 (456)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 237
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.77 E-value=4.2e-08 Score=101.27 Aligned_cols=103 Identities=13% Similarity=0.041 Sum_probs=79.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC---CcEEEeecccCCCC----CCCCeeEEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLPY----PSLSFDMLH 322 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~---~~~~~~~d~~~Lpf----~d~sFDlVv 322 (474)
..+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++ ++ ++.+..+|+..... .+.+||+|+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 3689999999999999999875 35899999999999888765 55 56777777665421 146899999
Q ss_pred eccccc--------cccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 323 CARCGV--------DWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 323 ss~~l~--------~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
+.-... ........++.++.++|+|||+++++....
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 863211 112345678999999999999999988644
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.77 E-value=1.8e-08 Score=103.88 Aligned_cols=104 Identities=14% Similarity=0.012 Sum_probs=79.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCC----CCCCeeEEEe
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPY----PSLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf----~d~sFDlVvs 323 (474)
..+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++ ++ ++.+..+|+..+.. .+++||+|++
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~--~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGA--DEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 37899999999999999998742 5899999999999888765 44 46777777665421 2568999998
Q ss_pred ccccccc--------cccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 324 ARCGVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 324 s~~l~~~--------~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
.-..+.. ..+...++.++.++|+|||.+++++....
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 6332211 13345789999999999999999886543
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.76 E-value=2.6e-08 Score=97.40 Aligned_cols=101 Identities=12% Similarity=0.035 Sum_probs=78.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
+.+|||||||+|.++..+.... ....++++|+++.|+++++++ ++...+...|...-+ +.+.||+|++.-++.+
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHH
T ss_pred CceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHH
Confidence 5799999999999999987763 457899999999999988765 677777777654443 5678999999987555
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
........+.++...|+|+|.++-...
T Consensus 211 Le~q~kg~g~~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 211 LETQQRGSGWEVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HHHHSTTHHHHHHHHSSCSEEEEEEEC
T ss_pred hhhhhhHHHHHHHHHhCCCCEEEeccc
Confidence 533223344499999999999887654
No 240
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.76 E-value=1.2e-08 Score=98.67 Aligned_cols=98 Identities=10% Similarity=-0.021 Sum_probs=76.8
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+.+|||||||+|.++..+. ....++++|+++.+++.++++ +.+..+...|....+.+. +||+|++.-+++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh 179 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLP 179 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHH
T ss_pred CCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHH
Confidence 35799999999999999887 236899999999999988765 667778888877777665 899999987755
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
+..........++...|+++|.++-..
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 553323344458888999998776554
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.75 E-value=2.4e-08 Score=102.66 Aligned_cols=101 Identities=19% Similarity=0.125 Sum_probs=78.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC-cEEEeecccCCCC----CCCCeeEEEecc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLPY----PSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~-~~~~~~d~~~Lpf----~d~sFDlVvss~ 325 (474)
.+|||+|||+|.++..+++. ...++++|+++.+++.|+++ ++. +.+..+|+..... .+++||+|++.-
T Consensus 211 ~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 68999999999999999986 46899999999999988765 443 6777777665421 256899999853
Q ss_pred ccccc--------cccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 326 CGVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 326 ~l~~~--------~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
..+.. ......++.++.++|+|||+++++....
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 22111 1234578999999999999999998654
No 242
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.73 E-value=3e-08 Score=98.72 Aligned_cols=85 Identities=15% Similarity=0.264 Sum_probs=62.1
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEee
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSF 306 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~ 306 (474)
...+.+.+.+....+ .+|||||||+|.++..+++.+ ..++++|+++.+++.++++ +. ++.+..+
T Consensus 29 ~i~~~i~~~~~~~~~--------~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~ 97 (299)
T 2h1r_A 29 GILDKIIYAAKIKSS--------DIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEG 97 (299)
T ss_dssp HHHHHHHHHHCCCTT--------CEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEC---
T ss_pred HHHHHHHHhcCCCCc--------CEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 345566666554433 789999999999999999874 4899999999999988765 33 5667777
Q ss_pred cccCCCCCCCCeeEEEeccccccc
Q 011964 307 ASKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 307 d~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
|+..++++ +||+|+++.. +++
T Consensus 98 D~~~~~~~--~~D~Vv~n~p-y~~ 118 (299)
T 2h1r_A 98 DAIKTVFP--KFDVCTANIP-YKI 118 (299)
T ss_dssp -CCSSCCC--CCSEEEEECC-GGG
T ss_pred chhhCCcc--cCCEEEEcCC-ccc
Confidence 88777664 7999999754 555
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.73 E-value=1.4e-08 Score=112.63 Aligned_cols=101 Identities=16% Similarity=0.186 Sum_probs=79.5
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC---cEEEeecccC-CCCCCCCeeEEEeccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQ-LPYPSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~---~~~~~~d~~~-Lpf~d~sFDlVvss~~ 326 (474)
.+|||+|||+|.++..++..+. ..|+++|+|+.+++.|+++ ++. +.+..+|+.. ++..+++||+|++.-.
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 6899999999999999998754 5799999999999988765 443 6778787765 4445679999998642
Q ss_pred cc----------cccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 327 GV----------DWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 327 l~----------~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.+ ....+...++.++.++|+|||+|+++...
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 11 22234457899999999999999998865
No 244
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.72 E-value=3.8e-08 Score=99.52 Aligned_cols=103 Identities=16% Similarity=0.159 Sum_probs=78.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCc----eeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELL----TMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~----~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~ 325 (474)
..+|||+|||+|.++..+++.... ...++|+|+++.+++.|+.+ ++.+.+..+|+.. +.+.+.||+|+++-
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISDL 209 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEEC
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEECC
Confidence 478999999999999988766211 26899999999999988764 6677777777654 34567899999986
Q ss_pred cccccccc----------------H-HHHHHHHHhhcCCCcEEEEEeCC
Q 011964 326 CGVDWDQK----------------D-GILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 326 ~l~~~~~d----------------~-~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.+..+..+ . ..++.++.+.|||||++++..+.
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 53333111 1 15799999999999999999864
No 245
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.70 E-value=3.2e-08 Score=101.99 Aligned_cols=114 Identities=18% Similarity=0.127 Sum_probs=80.1
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccC
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ 310 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~ 310 (474)
....+.+.+.+... ...+|||+|||+|.++..++++......++|+|+++.+++.| ..+.+..+|...
T Consensus 25 ~~l~~~~~~~~~~~--------~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~ 92 (421)
T 2ih2_A 25 PEVVDFMVSLAEAP--------RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLL 92 (421)
T ss_dssp HHHHHHHHHHCCCC--------TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGG
T ss_pred HHHHHHHHHhhccC--------CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhh
Confidence 34455566555422 235899999999999999987521235899999999998776 356677777766
Q ss_pred CCCCCCCeeEEEeccccccc----------ccc------------------HHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 311 LPYPSLSFDMLHCARCGVDW----------DQK------------------DGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 311 Lpf~d~sFDlVvss~~l~~~----------~~d------------------~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.+ +++.||+|+++--.... ..+ ...++..+.++|+|||.+++..+.
T Consensus 93 ~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 93 WE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 54 34689999996221111 011 115688999999999999998874
No 246
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.68 E-value=6.1e-08 Score=96.46 Aligned_cols=94 Identities=12% Similarity=-0.058 Sum_probs=65.7
Q ss_pred CCceEEEECC------CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEE-EeecccCCCCCCCCeeEEEecc
Q 011964 253 GVRTILDIGC------GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI-GSFASKQLPYPSLSFDMLHCAR 325 (474)
Q Consensus 253 ~~~~VLDIGC------GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~-~~~d~~~Lpf~d~sFDlVvss~ 325 (474)
...+|||+|| |+|. ..+++.-.....|+++|+++. + ..+.+ ..+|+..++++ ++||+|++..
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------~~v~~~i~gD~~~~~~~-~~fD~Vvsn~ 131 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------SDADSTLIGDCATVHTA-NKWDLIISDM 131 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------CSSSEEEESCGGGCCCS-SCEEEEEECC
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------CCCEEEEECccccCCcc-CcccEEEEcC
Confidence 3478999999 4476 333333111357999999987 1 24667 88898888775 6899999863
Q ss_pred cccccc-----------ccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 326 CGVDWD-----------QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 326 ~l~~~~-----------~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
. .++. .....+++++.|+|||||.|++..+..
T Consensus 132 ~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 132 Y-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp C-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred C-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 2 2110 112478999999999999999987543
No 247
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.66 E-value=1.8e-09 Score=104.15 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=80.1
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecc
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFAS 308 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~ 308 (474)
...+.+.+.+...++ .+|||||||+|.++..+++.+ ..++++|+++.+++.|+++. .++.+..+|+
T Consensus 16 ~~~~~i~~~~~~~~~--------~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~ 84 (245)
T 1yub_A 16 KVLNQIIKQLNLKET--------DTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDI 84 (245)
T ss_dssp TTHHHHHHHCCCCSS--------EEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCC
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhccCCceEEEECCh
Confidence 344566666554433 789999999999999999885 58999999999998887652 2467788898
Q ss_pred cCCCCCC-CCeeEEEecccccccc-----------ccHHHHH----HHHHhhcCCCcEEEEEeC
Q 011964 309 KQLPYPS-LSFDMLHCARCGVDWD-----------QKDGILL----LEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 309 ~~Lpf~d-~sFDlVvss~~l~~~~-----------~d~~~~L----~ei~RvLKPGG~lvis~~ 356 (474)
..+++++ ++| .|+++.. ++.. .....++ ..+.|+|+|||.+.+...
T Consensus 85 ~~~~~~~~~~f-~vv~n~P-y~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIP-YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp TTTTCCCSSEE-EEEEECC-SSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred hhcCcccCCCc-EEEEeCC-ccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 8888874 689 6776532 2211 1112234 668999999998877553
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.65 E-value=2e-07 Score=97.43 Aligned_cols=93 Identities=16% Similarity=0.261 Sum_probs=71.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+|||+|||+|.++..+++.+ ..++++|+++.+++.|+++ ++.+.+..+|+..+... +||+|++......
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRAG 365 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTTC
T ss_pred CCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCccc
Confidence 3789999999999999999874 4899999999999988764 55577888888776432 8999998643111
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
....++..+. .|+|||+++++.
T Consensus 366 ---~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 ---LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ---SCHHHHHHHH-HHCCSEEEEEES
T ss_pred ---hHHHHHHHHH-hcCCCcEEEEEC
Confidence 1134555554 599999999975
No 249
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.63 E-value=8.2e-08 Score=97.09 Aligned_cols=93 Identities=10% Similarity=0.064 Sum_probs=74.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||+|||+|.++.. ++. ...++++|+++.+++.|+++ ++ ++.+..+|+.... ++||+|++...
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP- 267 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP- 267 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT-
T ss_pred CCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc-
Confidence 36899999999999999 773 36899999999999988765 44 4778888887765 78999998632
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
. ....++.++.++|+|||.+++.+...
T Consensus 268 ~----~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 268 K----FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp T----TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred H----hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 1 12368999999999999999987644
No 250
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.62 E-value=8.1e-08 Score=92.72 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=55.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCCCCC-CCeeEEEecc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPS-LSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~~~Lpf~d-~sFDlVvss~ 325 (474)
..+|||||||+|.++..+++++ ..++++|+++.+++.++++. .++.+..+|+..+++++ ..| .|+++.
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~vv~nl 102 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-KIFGNI 102 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-EEEEEC
T ss_pred CCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-EEEEeC
Confidence 3789999999999999999885 57999999999999998763 35778889999998875 456 455553
No 251
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.59 E-value=2.5e-07 Score=96.68 Aligned_cols=93 Identities=17% Similarity=0.234 Sum_probs=71.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccC----CCCCCCCeeEEEecc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ----LPYPSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~----Lpf~d~sFDlVvss~ 325 (474)
.+|||+|||+|.++..|++.+ ..++++|+++.+++.|+++ ++ ++.+..+|+.. +++++++||+|++.-
T Consensus 288 ~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP 364 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP 364 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred CEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECC
Confidence 689999999999999999873 5899999999999988764 44 57788888766 456678999999863
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
-.... ..++..+. .++|++.++++.
T Consensus 365 Pr~g~----~~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 365 ARAGA----AGVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp CTTCC----HHHHHHHH-HHCCSEEEEEES
T ss_pred CCccH----HHHHHHHH-hcCCCeEEEEEC
Confidence 31111 23555554 378999888865
No 252
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.57 E-value=1.6e-07 Score=98.51 Aligned_cols=117 Identities=17% Similarity=0.133 Sum_probs=83.9
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcC------------CceeEEEEecCCHHHHHHHHHc-
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKE------------LLTMCIANYEASGSQVQLTLER- 297 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g------------~~~~~v~giD~s~~~l~~A~er- 297 (474)
....+.+.+.+.... ..+|||.|||+|.++..+++.- .....++|+|+++.+++.|+.+
T Consensus 157 ~~v~~~mv~~l~~~~--------~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl 228 (445)
T 2okc_A 157 RPLIQAMVDCINPQM--------GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL 228 (445)
T ss_dssp HHHHHHHHHHHCCCT--------TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC--------CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH
Confidence 344556666654333 3689999999999998887541 0224799999999999988754
Q ss_pred ---CC---CcEEEeecccCCCCCCCCeeEEEeccccccc--ccc--------------HHHHHHHHHhhcCCCcEEEEEe
Q 011964 298 ---GL---PAMIGSFASKQLPYPSLSFDMLHCARCGVDW--DQK--------------DGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 298 ---g~---~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~--~~d--------------~~~~L~ei~RvLKPGG~lvis~ 355 (474)
++ ...+..+|+...+... .||+|+++-.+... ... ...++..+.++|||||++++..
T Consensus 229 ~l~g~~~~~~~i~~gD~l~~~~~~-~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 229 YLHGIGTDRSPIVCEDSLEKEPST-LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp HHTTCCSSCCSEEECCTTTSCCSS-CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhCCCcCCCCEeeCCCCCCcccC-CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 55 5667777876665543 89999998543321 110 1368999999999999999988
Q ss_pred C
Q 011964 356 P 356 (474)
Q Consensus 356 ~ 356 (474)
|
T Consensus 308 p 308 (445)
T 2okc_A 308 P 308 (445)
T ss_dssp E
T ss_pred C
Confidence 6
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.51 E-value=1.4e-07 Score=94.15 Aligned_cols=88 Identities=15% Similarity=0.116 Sum_probs=71.0
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeec
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFA 307 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d 307 (474)
....+.+.+.+...++ .+|||||||+|.++..|++.+ ..++++|+++.+++.++++. .++.+..+|
T Consensus 36 ~~i~~~Iv~~l~~~~~--------~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD 104 (295)
T 3gru_A 36 KNFVNKAVESANLTKD--------DVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELYNNIEIIWGD 104 (295)
T ss_dssp HHHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHCSSEEEEESC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccCCCeEEEECc
Confidence 3455666666655444 789999999999999999874 58999999999999988762 467888999
Q ss_pred ccCCCCCCCCeeEEEeccccccc
Q 011964 308 SKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 308 ~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
+..+++++.+||.|+++.. +++
T Consensus 105 ~l~~~~~~~~fD~Iv~NlP-y~i 126 (295)
T 3gru_A 105 ALKVDLNKLDFNKVVANLP-YQI 126 (295)
T ss_dssp TTTSCGGGSCCSEEEEECC-GGG
T ss_pred hhhCCcccCCccEEEEeCc-ccc
Confidence 9999998889999998854 444
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.44 E-value=3.1e-07 Score=93.79 Aligned_cols=102 Identities=13% Similarity=0.023 Sum_probs=74.8
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC-------------CcEEEeecccCCCC----CC
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------------PAMIGSFASKQLPY----PS 315 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~-------------~~~~~~~d~~~Lpf----~d 315 (474)
.+.+|||||||+|.++..+++++. ..++.+|+++.+++.|++.-. .+.+..+|+...-- .+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 568999999999999999998853 689999999999999998621 25566666554321 35
Q ss_pred CCeeEEEecccccccc--c---cHHHHHHHH----HhhcCCCcEEEEEeC
Q 011964 316 LSFDMLHCARCGVDWD--Q---KDGILLLEV----DRVLKPGGYFVWTSP 356 (474)
Q Consensus 316 ~sFDlVvss~~l~~~~--~---d~~~~L~ei----~RvLKPGG~lvis~~ 356 (474)
++||+|++...-.... + ....+++.+ .++|+|||++++..-
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 7899999864321211 1 123566666 899999999998764
No 255
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.36 E-value=8.2e-07 Score=86.60 Aligned_cols=82 Identities=17% Similarity=0.135 Sum_probs=64.9
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecc
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFAS 308 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~ 308 (474)
...+.+.+.+...++ .+|||||||+|.++..|++++ ..++++|+++.|++.++++. .++.+..+|+
T Consensus 16 ~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~ 84 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKT--------DTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDA 84 (255)
T ss_dssp HHHHHHHHHHCCCTT--------CEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCT
T ss_pred HHHHHHHHhcCCCCc--------CEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcch
Confidence 345566666665544 789999999999999999885 58999999999999998762 4678888999
Q ss_pred cCCCCCC----CCeeEEEecc
Q 011964 309 KQLPYPS----LSFDMLHCAR 325 (474)
Q Consensus 309 ~~Lpf~d----~sFDlVvss~ 325 (474)
..+++++ +.|| |+++.
T Consensus 85 ~~~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 85 LQFDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp TTCCGGGSCCSSCEE-EEEEC
T ss_pred HhCCHHHhccCCCeE-EEecC
Confidence 8888653 5688 66663
No 256
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.36 E-value=1.7e-06 Score=89.53 Aligned_cols=102 Identities=12% Similarity=0.098 Sum_probs=74.2
Q ss_pred ceEEEECCCCchHHHHhhhcCCc-------------------------------------eeEEEEecCCHHHHHHHHHc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELL-------------------------------------TMCIANYEASGSQVQLTLER 297 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~-------------------------------------~~~v~giD~s~~~l~~A~er 297 (474)
..|||.+||+|.++..++..+.. ...|+++|+++.|++.|+++
T Consensus 203 ~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~N 282 (393)
T 3k0b_A 203 RPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQN 282 (393)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHH
Confidence 68999999999998877654211 14599999999999998865
Q ss_pred ----CC--CcEEEeecccCCCCCCCCeeEEEecccccc-cc--ccHHHHHHHHHhhcCC--CcEEEEEeCC
Q 011964 298 ----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVD-WD--QKDGILLLEVDRVLKP--GGYFVWTSPL 357 (474)
Q Consensus 298 ----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~-~~--~d~~~~L~ei~RvLKP--GG~lvis~~~ 357 (474)
++ .+.+...|+.+++.++ +||+|+++--... .. .+...+..++.++||+ ||.+++.+..
T Consensus 283 a~~~gl~~~I~~~~~D~~~~~~~~-~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 283 AVEAGLGDLITFRQLQVADFQTED-EYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHTTCTTCSEEEECCGGGCCCCC-CSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHHcCCCCceEEEECChHhCCCCC-CCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 55 3778889999888764 8999999843211 11 1223566666677766 8988887753
No 257
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.35 E-value=1.6e-06 Score=89.32 Aligned_cols=102 Identities=13% Similarity=0.145 Sum_probs=75.8
Q ss_pred ceEEEECCCCchHHHHhhhcCC-------------------------------------ceeEEEEecCCHHHHHHHHHc
Q 011964 255 RTILDIGCGYGSFGAHLFSKEL-------------------------------------LTMCIANYEASGSQVQLTLER 297 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~-------------------------------------~~~~v~giD~s~~~l~~A~er 297 (474)
.+|||++||+|.++..++..+. ....|+|+|+++.+++.|+++
T Consensus 197 ~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~N 276 (385)
T 3ldu_A 197 RVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAREN 276 (385)
T ss_dssp SCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHH
Confidence 7899999999999988875521 114699999999999998865
Q ss_pred ----CC--CcEEEeecccCCCCCCCCeeEEEecccccc-cc--ccHHHHHHHHHhhcCC--CcEEEEEeCC
Q 011964 298 ----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVD-WD--QKDGILLLEVDRVLKP--GGYFVWTSPL 357 (474)
Q Consensus 298 ----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~-~~--~d~~~~L~ei~RvLKP--GG~lvis~~~ 357 (474)
++ .+.+...|+.+++.+ .+||+|+++--... .. .+...+.+++.++||+ ||.+++.+..
T Consensus 277 a~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 277 AEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 55 467888898888765 48999999744221 11 2234667777778877 8888887763
No 258
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.33 E-value=5e-06 Score=83.25 Aligned_cols=105 Identities=8% Similarity=-0.053 Sum_probs=73.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCC---CCeeEEEec--
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPS---LSFDMLHCA-- 324 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lpf~d---~sFDlVvss-- 324 (474)
.+|||+|||+|..+..+++.-.....|+++|+++.+++.++++ ++ ++.+...|+..++... ++||.|++.
T Consensus 104 ~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPS 183 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECCC
T ss_pred CEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcCC
Confidence 7899999999999999987511235799999999999888765 55 4677778877775432 579999962
Q ss_pred --c-ccc-c-----c----c-cc-------HHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 325 --R-CGV-D-----W----D-QK-------DGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 325 --~-~l~-~-----~----~-~d-------~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
. ..+ . | . .+ ...+|..+.++|+ ||++++++-....
T Consensus 184 cSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 184 CSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ 239 (309)
T ss_dssp CCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG
T ss_pred cCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh
Confidence 1 111 1 0 0 11 1246778888887 9999998876543
No 259
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.31 E-value=1.2e-06 Score=89.59 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=68.7
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC--CCC------------
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPS------------ 315 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~-~~~~~~~d~~~Lp--f~d------------ 315 (474)
.+|||+|||+|.++..+++.. ..|+++|+++.+++.|+++ ++ ++.+..+|+.++. +.+
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 579999999999999998753 5899999999999988754 44 5677777765541 221
Q ss_pred --CCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 316 --LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 316 --~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.+||+|++.--. ..+..++.++|+++|.+++....
T Consensus 292 ~~~~fD~Vv~dPPr-------~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 292 KSYQCETIFVDPPR-------SGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp GGCCEEEEEECCCT-------TCCCHHHHHHHTTSSEEEEEESC
T ss_pred ccCCCCEEEECcCc-------cccHHHHHHHHhCCCEEEEEECC
Confidence 379999865221 12345677778899999988764
No 260
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.31 E-value=1.9e-06 Score=84.55 Aligned_cols=102 Identities=14% Similarity=0.183 Sum_probs=67.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHH---cCCCcEEEeecccCCCCCCCCeeEEEeccccc---
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE---RGLPAMIGSFASKQLPYPSLSFDMLHCARCGV--- 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~e---rg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~--- 328 (474)
.+|||+|||+|.|+..++++. ....+.++|+...+...... .+.++.....+++...++++.||+|+|..+..
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~ 154 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESSSS 154 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSC
T ss_pred CEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccCcCc
Confidence 689999999999999887662 23567777777433100110 12233444444455677888999999975322
Q ss_pred cccccHH--HHHHHHHhhcCCC-cEEEEEeCC
Q 011964 329 DWDQKDG--ILLLEVDRVLKPG-GYFVWTSPL 357 (474)
Q Consensus 329 ~~~~d~~--~~L~ei~RvLKPG-G~lvis~~~ 357 (474)
++.+... .+|..+.++|||| |.|++-.+.
T Consensus 155 ~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 155 SVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 2322222 3578889999999 999998775
No 261
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.31 E-value=2.5e-06 Score=87.89 Aligned_cols=106 Identities=18% Similarity=0.166 Sum_probs=73.1
Q ss_pred CceEEEECCCCchHHHHhhhc----------------CCceeEEEEecCC-----------HHHHHHHHH-cC--CCcEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSK----------------ELLTMCIANYEAS-----------GSQVQLTLE-RG--LPAMI 303 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~----------------g~~~~~v~giD~s-----------~~~l~~A~e-rg--~~~~~ 303 (474)
..+|+|+||++|.++..+... ..+...+...|.. +.+.+.+++ .+ .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 478999999999999887654 1235677888876 444444333 22 23445
Q ss_pred Eeec---ccCCCCCCCCeeEEEeccccccccccHH---------------------------------------HHHHHH
Q 011964 304 GSFA---SKQLPYPSLSFDMLHCARCGVDWDQKDG---------------------------------------ILLLEV 341 (474)
Q Consensus 304 ~~~d---~~~Lpf~d~sFDlVvss~~l~~~~~d~~---------------------------------------~~L~ei 341 (474)
..+. ...-.||+++||+|+++.+ +||..+.. .+|+-.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 3345699999999999988 77843321 126666
Q ss_pred HhhcCCCcEEEEEeCCCCc
Q 011964 342 DRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 342 ~RvLKPGG~lvis~~~~~~ 360 (474)
.+.|+|||.++++..+...
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 212 SEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHEEEEEEEEEEEECCCT
T ss_pred HHHhccCCeEEEEEecCCC
Confidence 8999999999999887654
No 262
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.30 E-value=4.5e-06 Score=86.08 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=75.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCc-------------------------------------eeEEEEecCCHHHHHHHHHc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELL-------------------------------------TMCIANYEASGSQVQLTLER 297 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~-------------------------------------~~~v~giD~s~~~l~~A~er 297 (474)
..|||.+||+|.++...+..+.. ...++|+|+++.|++.|+++
T Consensus 196 ~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~N 275 (384)
T 3ldg_A 196 KPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKN 275 (384)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHH
Confidence 78999999999998887654211 13599999999999998865
Q ss_pred ----CC--CcEEEeecccCCCCCCCCeeEEEeccccc-ccc--ccHHHHHHHHHhhcCC--CcEEEEEeCC
Q 011964 298 ----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGV-DWD--QKDGILLLEVDRVLKP--GGYFVWTSPL 357 (474)
Q Consensus 298 ----g~--~~~~~~~d~~~Lpf~d~sFDlVvss~~l~-~~~--~d~~~~L~ei~RvLKP--GG~lvis~~~ 357 (474)
++ .+.+...|+.+++.++ +||+|+++--.. ... .+...+..++.+.||+ ||.+++.++.
T Consensus 276 a~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 276 AREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 55 3678888998888764 899999983321 121 2234677777777776 9999888763
No 263
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.29 E-value=3.4e-06 Score=86.72 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=70.2
Q ss_pred CCceEEEECCCCchHHHHhhhc--------------CCceeEEEEecCCHHHHHHH-HHc----------------CCCc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSK--------------ELLTMCIANYEASGSQVQLT-LER----------------GLPA 301 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~--------------g~~~~~v~giD~s~~~l~~A-~er----------------g~~~ 301 (474)
...+|+|+|||+|.++..+... ..+...|...|......... +.- +.+.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 3578999999999999887321 12346777777654432111 110 0011
Q ss_pred EEEe---ecccCCCCCCCCeeEEEeccccccccc--------------------------------------cHHHHHHH
Q 011964 302 MIGS---FASKQLPYPSLSFDMLHCARCGVDWDQ--------------------------------------KDGILLLE 340 (474)
Q Consensus 302 ~~~~---~d~~~Lpf~d~sFDlVvss~~l~~~~~--------------------------------------d~~~~L~e 340 (474)
.+.. ++...-.||+++||+|+|+.+ +||.. |-..+|+.
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 223334589999999999988 77754 22346889
Q ss_pred HHhhcCCCcEEEEEeCCCCc
Q 011964 341 VDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 341 i~RvLKPGG~lvis~~~~~~ 360 (474)
..+.|+|||.++++......
T Consensus 211 ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHEEEEEEEEEEEEECCC
T ss_pred HHHHhCCCCEEEEEEecCCC
Confidence 99999999999999886543
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.22 E-value=2.7e-06 Score=83.70 Aligned_cols=86 Identities=14% Similarity=0.096 Sum_probs=66.8
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC--CCcEEEeeccc
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--LPAMIGSFASK 309 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg--~~~~~~~~d~~ 309 (474)
...+.+.+.+... .. +|||||||+|.++..|++.+ ..++++|+++.|++.++++. .++.+..+|+.
T Consensus 34 ~i~~~Iv~~~~~~--------~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l 101 (271)
T 3fut_A 34 AHLRRIVEAARPF--------TG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDAL 101 (271)
T ss_dssp HHHHHHHHHHCCC--------CS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGG
T ss_pred HHHHHHHHhcCCC--------CC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECChh
Confidence 4455666655432 23 89999999999999999985 47999999999999998763 35778889998
Q ss_pred CCCCCCC-CeeEEEeccccccc
Q 011964 310 QLPYPSL-SFDMLHCARCGVDW 330 (474)
Q Consensus 310 ~Lpf~d~-sFDlVvss~~l~~~ 330 (474)
.+++++. .||.|+++.- ++.
T Consensus 102 ~~~~~~~~~~~~iv~NlP-y~i 122 (271)
T 3fut_A 102 LYPWEEVPQGSLLVANLP-YHI 122 (271)
T ss_dssp GSCGGGSCTTEEEEEEEC-SSC
T ss_pred hCChhhccCccEEEecCc-ccc
Confidence 8888753 6899998854 443
No 265
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.21 E-value=2.9e-06 Score=86.71 Aligned_cols=107 Identities=15% Similarity=0.169 Sum_probs=76.6
Q ss_pred CCceEEEECCCCchHHHHhhhc---------------CCceeEEEEecCCHHHHHHHHHcCC------CcEEEee---cc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSK---------------ELLTMCIANYEASGSQVQLTLERGL------PAMIGSF---AS 308 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~---------------g~~~~~v~giD~s~~~l~~A~erg~------~~~~~~~---d~ 308 (474)
...+|+|+||++|.++..+... ..+...+...|..........+.-. +..+..+ +.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999998877654 2456788888987766655543311 2244333 34
Q ss_pred cCCCCCCCCeeEEEeccccccccccH---------------------------------HHHHHHHHhhcCCCcEEEEEe
Q 011964 309 KQLPYPSLSFDMLHCARCGVDWDQKD---------------------------------GILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 309 ~~Lpf~d~sFDlVvss~~l~~~~~d~---------------------------------~~~L~ei~RvLKPGG~lvis~ 355 (474)
....||+++||+|+|+.+ +||..+. ..+|+-..+.|+|||.++++.
T Consensus 131 y~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 446799999999999987 7784321 134888899999999999998
Q ss_pred CCCCc
Q 011964 356 PLTNP 360 (474)
Q Consensus 356 ~~~~~ 360 (474)
.+...
T Consensus 210 ~gr~~ 214 (359)
T 1m6e_X 210 LGRRS 214 (359)
T ss_dssp EECSS
T ss_pred ecCCC
Confidence 76644
No 266
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.20 E-value=6.4e-06 Score=89.89 Aligned_cols=97 Identities=16% Similarity=0.155 Sum_probs=67.9
Q ss_pred CceEEEECCCCchHH---HHhhhcCCceeEEEEecCCHHHHHHHHH----cCC--CcEEEeecccCCCCCCCCeeEEEec
Q 011964 254 VRTILDIGCGYGSFG---AHLFSKELLTMCIANYEASGSQVQLTLE----RGL--PAMIGSFASKQLPYPSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~---~~La~~g~~~~~v~giD~s~~~l~~A~e----rg~--~~~~~~~d~~~Lpf~d~sFDlVvss 324 (474)
...|||||||+|.+. ...++++...+.|+++|-++ |...|++ ++. .++++.++++++..|. .+|+|||.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPE-KVDIIVSE 435 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPE-KADIIVSE 435 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSS-CEEEEECC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCc-ccCEEEEE
Confidence 357999999999984 44444444456899999997 4444433 333 4778889999988774 79999997
Q ss_pred cccccc-cccHHHHHHHHHhhcCCCcEEE
Q 011964 325 RCGVDW-DQKDGILLLEVDRVLKPGGYFV 352 (474)
Q Consensus 325 ~~l~~~-~~d~~~~L~ei~RvLKPGG~lv 352 (474)
....-. .+.-...|....|.|||||.++
T Consensus 436 wMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 432211 1222357788899999999876
No 267
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.16 E-value=2.3e-06 Score=84.49 Aligned_cols=85 Identities=12% Similarity=0.098 Sum_probs=63.3
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCc-eeEEEEecCCHHHHHHHHHc-CCCcEEEeeccc
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELL-TMCIANYEASGSQVQLTLER-GLPAMIGSFASK 309 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~-~~~v~giD~s~~~l~~A~er-g~~~~~~~~d~~ 309 (474)
...+.+.+.+...++ .+|||||||+|.++..|++.+.. ...++++|+++.|++.++++ ..++.+..+|+.
T Consensus 29 ~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~ 100 (279)
T 3uzu_A 29 GVIDAIVAAIRPERG--------ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHCCCTT--------CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGG
T ss_pred HHHHHHHHhcCCCCc--------CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChh
Confidence 455666676665444 78999999999999999987431 12399999999999999887 345778888999
Q ss_pred CCCCCCC------CeeEEEec
Q 011964 310 QLPYPSL------SFDMLHCA 324 (474)
Q Consensus 310 ~Lpf~d~------sFDlVvss 324 (474)
.+++++- ..+.|+++
T Consensus 101 ~~~~~~~~~~~~~~~~~vv~N 121 (279)
T 3uzu_A 101 TFDFGSIARPGDEPSLRIIGN 121 (279)
T ss_dssp GCCGGGGSCSSSSCCEEEEEE
T ss_pred cCChhHhcccccCCceEEEEc
Confidence 9887642 23456665
No 268
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.16 E-value=3.3e-06 Score=86.88 Aligned_cols=95 Identities=16% Similarity=0.050 Sum_probs=70.9
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-------------------CCC-cEEEeecccCCCC-
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-------------------GLP-AMIGSFASKQLPY- 313 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-------------------g~~-~~~~~~d~~~Lpf- 313 (474)
.+|||+|||+|.++..++.+. ....|+++|+++.+++.++++ ++. +.+..+|+..+..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 689999999999999999872 124699999999999888754 443 5666666654421
Q ss_pred CCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 314 PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 314 ~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
..+.||+|+..- . .....++..+.+.|||||.++++.
T Consensus 128 ~~~~fD~I~lDP-~----~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLDP-F----GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEECC-S----SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeCC-C----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999542 1 123568999999999999888864
No 269
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.16 E-value=4.4e-06 Score=89.85 Aligned_cols=117 Identities=11% Similarity=0.035 Sum_probs=80.9
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhc---CC--------------ceeEEEEecCCHHHHHHH
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSK---EL--------------LTMCIANYEASGSQVQLT 294 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~---g~--------------~~~~v~giD~s~~~l~~A 294 (474)
...+.+.+.+.... ..+|||.+||+|.++..+++. .. ....++|+|+++.+++.|
T Consensus 156 ~iv~~mv~~l~p~~--------~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 156 PLIKTIIHLLKPQP--------REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp HHHHHHHHHHCCCT--------TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhccCC--------CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 34455566654332 368999999999999877653 00 124799999999999998
Q ss_pred HHc----CCC------cEEEeecccCCC-CCCCCeeEEEecccccccc------------cc-HHHHHHHHHhhcCCCcE
Q 011964 295 LER----GLP------AMIGSFASKQLP-YPSLSFDMLHCARCGVDWD------------QK-DGILLLEVDRVLKPGGY 350 (474)
Q Consensus 295 ~er----g~~------~~~~~~d~~~Lp-f~d~sFDlVvss~~l~~~~------------~d-~~~~L~ei~RvLKPGG~ 350 (474)
+.+ ++. ..+..+|+...+ .+.+.||+|+++-.+.... .+ .-.++..+.+.|||||+
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCE
Confidence 764 444 456666654433 3456899999974322110 11 23689999999999999
Q ss_pred EEEEeC
Q 011964 351 FVWTSP 356 (474)
Q Consensus 351 lvis~~ 356 (474)
+.+..|
T Consensus 308 ~a~V~p 313 (541)
T 2ar0_A 308 AAVVVP 313 (541)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999876
No 270
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.15 E-value=3.2e-06 Score=82.18 Aligned_cols=84 Identities=11% Similarity=0.019 Sum_probs=60.5
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC---CcEEEeecc
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFAS 308 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~---~~~~~~~d~ 308 (474)
...+.+.+.+...++ .+|||||||+|.++. +.. + ....++++|+++.|++.++++.. ++.+..+|+
T Consensus 8 ~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~ 76 (252)
T 1qyr_A 8 FVIDSIVSAINPQKG--------QAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDA 76 (252)
T ss_dssp HHHHHHHHHHCCCTT--------CCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCG
T ss_pred HHHHHHHHhcCCCCc--------CEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECch
Confidence 345566666654444 689999999999999 653 3 11238999999999999987642 567888898
Q ss_pred cCCCCCCC-----CeeEEEeccc
Q 011964 309 KQLPYPSL-----SFDMLHCARC 326 (474)
Q Consensus 309 ~~Lpf~d~-----sFDlVvss~~ 326 (474)
..+++++. ..|.|+++..
T Consensus 77 ~~~~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 77 MTFNFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp GGCCHHHHHHHHTSCEEEEEECC
T ss_pred hhCCHHHhhcccCCceEEEECCC
Confidence 88876532 3467777743
No 271
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.14 E-value=8.2e-06 Score=84.37 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=72.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CCC---cEEEeecccCCC--CCCCCeeEEEec
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQLP--YPSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~~---~~~~~~d~~~Lp--f~d~sFDlVvss 324 (474)
..+|||++||+|.++..++.+.-....|+++|+++.+++.++++ ++. +.+..+|+..+. ...+.||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 36899999999999999988521236899999999999888765 553 567777764431 124579999976
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
- . .....++..+.+.|+|||+++++.
T Consensus 133 P--~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P--F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C--S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C--C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 3 1 223458999999999999888865
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.12 E-value=1.3e-05 Score=77.76 Aligned_cols=83 Identities=16% Similarity=0.147 Sum_probs=62.7
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-CCCcEEEeecccC
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-GLPAMIGSFASKQ 310 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-g~~~~~~~~d~~~ 310 (474)
...+.+.+.+....+ .+|||||||+|.++..+++.+ ...++++|+++.+++.++++ ..++.+..+|+..
T Consensus 18 ~i~~~iv~~~~~~~~--------~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 18 GVLKKIAEELNIEEG--------NTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSIGDERLEVINEDASK 87 (249)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred HHHHHHHHhcCCCCc--------CEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhh
Confidence 455666666655444 789999999999999999884 25899999999999999876 2246788889988
Q ss_pred CCCCCCC-eeEEEec
Q 011964 311 LPYPSLS-FDMLHCA 324 (474)
Q Consensus 311 Lpf~d~s-FDlVvss 324 (474)
+++++.. ...|+++
T Consensus 88 ~~~~~~~~~~~vv~N 102 (249)
T 3ftd_A 88 FPFCSLGKELKVVGN 102 (249)
T ss_dssp CCGGGSCSSEEEEEE
T ss_pred CChhHccCCcEEEEE
Confidence 8877532 2255555
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.03 E-value=6.1e-06 Score=80.47 Aligned_cols=69 Identities=14% Similarity=0.094 Sum_probs=55.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCH-------HHHHHHHHc----CC--CcEEEeecccCC-C-CCC--CC
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASG-------SQVQLTLER----GL--PAMIGSFASKQL-P-YPS--LS 317 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~-------~~l~~A~er----g~--~~~~~~~d~~~L-p-f~d--~s 317 (474)
.+|||+|||+|.++..++..+ ..|+++|+++ .+++.|+++ ++ .+.+..+|+..+ + +++ ++
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 689999999999999999875 4799999999 888888754 22 367777777663 3 444 68
Q ss_pred eeEEEeccc
Q 011964 318 FDMLHCARC 326 (474)
Q Consensus 318 FDlVvss~~ 326 (474)
||+|++.-.
T Consensus 162 fD~V~~dP~ 170 (258)
T 2r6z_A 162 PDIVYLDPM 170 (258)
T ss_dssp CSEEEECCC
T ss_pred ccEEEECCC
Confidence 999998754
No 274
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.00 E-value=1.9e-05 Score=84.92 Aligned_cols=103 Identities=17% Similarity=0.091 Sum_probs=72.5
Q ss_pred ceEEEECCCCchHHHHhhhcC--------------CceeEEEEecCCHHHHHHHHHc----CCCcEE--EeecccCCC-C
Q 011964 255 RTILDIGCGYGSFGAHLFSKE--------------LLTMCIANYEASGSQVQLTLER----GLPAMI--GSFASKQLP-Y 313 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g--------------~~~~~v~giD~s~~~l~~A~er----g~~~~~--~~~d~~~Lp-f 313 (474)
.+|||.+||+|.+...+++.- .....++|+|+++.+++.|+.+ ++...+ ..+|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 489999999999987765320 0036899999999999988754 554444 555554444 5
Q ss_pred CCCCeeEEEeccccc--cccc-------------------------c-HHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 314 PSLSFDMLHCARCGV--DWDQ-------------------------K-DGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 314 ~d~sFDlVvss~~l~--~~~~-------------------------d-~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
++..||+|+++--+. .|.. + .-.++..+.+.|||||++.+..|.
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 567899999973322 1210 0 115889999999999999998863
No 275
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.00 E-value=6e-06 Score=82.44 Aligned_cols=86 Identities=12% Similarity=0.108 Sum_probs=65.1
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC----CCcEEEee
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSF 306 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg----~~~~~~~~ 306 (474)
....+.+.+.+...++ .+|||+|||+|.++..+++... ...++++|.++.|++.|+++- .++.+..+
T Consensus 12 pvLl~e~l~~L~~~~g--------~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~ 82 (301)
T 1m6y_A 12 PVMVREVIEFLKPEDE--------KIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKV 82 (301)
T ss_dssp CTTHHHHHHHHCCCTT--------CEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEEC
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 3445566666665444 7899999999999999998732 368999999999999998762 45778888
Q ss_pred cccCCC--CC---CCCeeEEEecc
Q 011964 307 ASKQLP--YP---SLSFDMLHCAR 325 (474)
Q Consensus 307 d~~~Lp--f~---d~sFDlVvss~ 325 (474)
+...++ ++ .++||.|++..
T Consensus 83 d~~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 83 SYREADFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp CGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEcC
Confidence 877765 22 15799999753
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.97 E-value=2.5e-05 Score=86.56 Aligned_cols=104 Identities=16% Similarity=0.099 Sum_probs=71.8
Q ss_pred ceEEEECCCCchHHHHhhhcC------C-----------------------------------ceeEEEEecCCHHHHHH
Q 011964 255 RTILDIGCGYGSFGAHLFSKE------L-----------------------------------LTMCIANYEASGSQVQL 293 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g------~-----------------------------------~~~~v~giD~s~~~l~~ 293 (474)
..|||.+||+|.++...+... . ....++|+|+++.+++.
T Consensus 192 ~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~ 271 (703)
T 3v97_A 192 TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQR 271 (703)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHH
T ss_pred CeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHH
Confidence 689999999999988776531 0 11479999999999998
Q ss_pred HHHc----CCC--cEEEeecccCC--CCCCCCeeEEEecccc-ccccc--cHHHH---HHHHHhhcCCCcEEEEEeCCC
Q 011964 294 TLER----GLP--AMIGSFASKQL--PYPSLSFDMLHCARCG-VDWDQ--KDGIL---LLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 294 A~er----g~~--~~~~~~d~~~L--pf~d~sFDlVvss~~l-~~~~~--d~~~~---L~ei~RvLKPGG~lvis~~~~ 358 (474)
|+++ |+. +.+...|+..+ |..+++||+|+++--. ..+.. +...+ |.++.+.+.|||.+++.++..
T Consensus 272 A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 272 ARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeCCH
Confidence 8765 554 57788888877 4445589999998331 11211 22233 455556666899999887643
No 277
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.94 E-value=0.00012 Score=72.71 Aligned_cols=102 Identities=18% Similarity=0.159 Sum_probs=75.8
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----------CCCcEEEeecccCC-CCCCCCeeEE
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------GLPAMIGSFASKQL-PYPSLSFDML 321 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----------g~~~~~~~~d~~~L-pf~d~sFDlV 321 (474)
.+++||=||.|.|..+..+++.. ....++.+|+++..++.+++. ..++.+...|+... .-..++||+|
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 46899999999999999998873 346899999999999998764 13456666665543 3456789999
Q ss_pred Eeccccccccc----cHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 322 HCARCGVDWDQ----KDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 322 vss~~l~~~~~----d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+.-.. -.... ....+++.+++.|+|||+++....
T Consensus 162 i~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 97532 21111 114689999999999999998653
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.88 E-value=1.1e-05 Score=88.45 Aligned_cols=99 Identities=19% Similarity=0.120 Sum_probs=68.1
Q ss_pred CceEEEECCCCchHHHHhhhc----C--------CceeEEEEecCCHHHHHHHHH---cC--CCcEEEeecccCCCCC--
Q 011964 254 VRTILDIGCGYGSFGAHLFSK----E--------LLTMCIANYEASGSQVQLTLE---RG--LPAMIGSFASKQLPYP-- 314 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~----g--------~~~~~v~giD~s~~~l~~A~e---rg--~~~~~~~~d~~~Lpf~-- 314 (474)
...|||||||+|.+....+.. + .....|+++|.++.++...+. ++ -.+.++.++++++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 357999999999996432211 1 124689999999865543332 33 3477888899888763
Q ss_pred ---CCCeeEEEecccccccc-ccHHHHHHHHHhhcCCCcEEE
Q 011964 315 ---SLSFDMLHCARCGVDWD-QKDGILLLEVDRVLKPGGYFV 352 (474)
Q Consensus 315 ---d~sFDlVvss~~l~~~~-~d~~~~L~ei~RvLKPGG~lv 352 (474)
...+|+|||.....-.. +-....|..+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 46899999985432211 122357888899999999876
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.84 E-value=0.00011 Score=79.14 Aligned_cols=123 Identities=20% Similarity=0.144 Sum_probs=83.0
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcC--CceeEEEEecCCHHHHHHHHHc----CC---Cc
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKE--LLTMCIANYEASGSQVQLTLER----GL---PA 301 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g--~~~~~v~giD~s~~~l~~A~er----g~---~~ 301 (474)
....+.+.+++..... +....+|||.+||+|.+...+++.- .....++|+|+++.++..|+.+ ++ ..
T Consensus 203 ~~Vv~lmv~ll~~~~~----~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~ 278 (542)
T 3lkd_A 203 QPVAKLMTQIAFLGRE----DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQ 278 (542)
T ss_dssp HHHHHHHHHHHHTTCT----TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHhcccC----CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCcc
Confidence 3445566666542110 1234689999999999988776551 1236899999999999988754 55 24
Q ss_pred EEEeecccCC--C-CCCCCeeEEEecccc-ccccc--------------------c-HHHHHHHHHhhcC-CCcEEEEEe
Q 011964 302 MIGSFASKQL--P-YPSLSFDMLHCARCG-VDWDQ--------------------K-DGILLLEVDRVLK-PGGYFVWTS 355 (474)
Q Consensus 302 ~~~~~d~~~L--p-f~d~sFDlVvss~~l-~~~~~--------------------d-~~~~L~ei~RvLK-PGG~lvis~ 355 (474)
.+..+|.... | +....||+|+++--+ ..|.. + .-.++..+.+.|| |||++.+..
T Consensus 279 ~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 279 FLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp EEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred ceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 5677776655 3 456789999987221 11100 0 1147899999999 999999988
Q ss_pred CC
Q 011964 356 PL 357 (474)
Q Consensus 356 ~~ 357 (474)
|.
T Consensus 359 P~ 360 (542)
T 3lkd_A 359 PH 360 (542)
T ss_dssp ET
T ss_pred cc
Confidence 63
No 280
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.81 E-value=2.9e-05 Score=76.29 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=64.7
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHH---cCCCcEEEeecccCCCCCCCCeeEEEeccccc---
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE---RGLPAMIGSFASKQLPYPSLSFDMLHCARCGV--- 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~e---rg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~--- 328 (474)
.+|||+|||+|.|+.+.++.. ...++.++|+...+...+.. .+.++.....+++...++.+.+|+|+|-.+..
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApnsG~ 170 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGESSPS 170 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCCCSC
T ss_pred CEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCccCCCC
Confidence 689999999999999988653 34678899987653222111 01122222222222345678899999975522
Q ss_pred cccccHH--HHHHHHHhhcCCC--cEEEEEeCC
Q 011964 329 DWDQKDG--ILLLEVDRVLKPG--GYFVWTSPL 357 (474)
Q Consensus 329 ~~~~d~~--~~L~ei~RvLKPG--G~lvis~~~ 357 (474)
+..+... .+|.-+.++|+|| |.|++-.+.
T Consensus 171 ~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 171 IAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 1111111 3566678899999 999998875
No 281
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.73 E-value=0.00034 Score=71.51 Aligned_cols=120 Identities=10% Similarity=0.076 Sum_probs=78.8
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
.+.+|||+||.+|.|+..+++++ ..|+++|+.+ |-..... ...+.+...|+.....+.+.||+|+|-.+ .
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~-l~~~l~~-~~~V~~~~~d~~~~~~~~~~~D~vvsDm~-----~ 280 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGP-MAQSLMD-TGQVTWLREDGFKFRPTRSNISWMVCDMV-----E 280 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT---CEEEEECSSC-CCHHHHT-TTCEEEECSCTTTCCCCSSCEEEEEECCS-----S
T ss_pred CCCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhh-cChhhcc-CCCeEEEeCccccccCCCCCcCEEEEcCC-----C
Confidence 34899999999999999999986 4799999764 2222222 23567778888887777788999998644 3
Q ss_pred cHHHHHHHHHhhcCCC---cEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCce
Q 011964 333 KDGILLLEVDRVLKPG---GYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWE 386 (474)
Q Consensus 333 d~~~~L~ei~RvLKPG---G~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~ 386 (474)
++...+.-+.+.|..| +.++........ +..+....+..+.......++.
T Consensus 281 ~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~----~~~~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 281 KPAKVAALMAQWLVNGWCRETIFNLKLPMKK----RYEEVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEEECCSSS----HHHHHHHHHHHHHHHHHHTTCC
T ss_pred ChHHhHHHHHHHHhccccceEEEEEEecccc----hHHHHHHHHHHHHHHHHhcCcc
Confidence 4455555555555544 555444443222 2234455566666666666654
No 282
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.72 E-value=2.6e-05 Score=76.08 Aligned_cols=101 Identities=12% Similarity=0.104 Sum_probs=63.6
Q ss_pred CCceEEEECCCCchHHHHhhhc-------CCc----eeEEEEecCCH---HHHHHH-----------HHc----------
Q 011964 253 GVRTILDIGCGYGSFGAHLFSK-------ELL----TMCIANYEASG---SQVQLT-----------LER---------- 297 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~-------g~~----~~~v~giD~s~---~~l~~A-----------~er---------- 297 (474)
...+|||||+|+|.++..+++. +.. ...++++|..+ +++..| ++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3468999999999998886543 221 36788888765 554432 221
Q ss_pred ---------CCCcEEEeecccC-CCC-CC---CCeeEEEecccccccccc--HHHHHHHHHhhcCCCcEEEE
Q 011964 298 ---------GLPAMIGSFASKQ-LPY-PS---LSFDMLHCARCGVDWDQK--DGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 298 ---------g~~~~~~~~d~~~-Lpf-~d---~sFDlVvss~~l~~~~~d--~~~~L~ei~RvLKPGG~lvi 353 (474)
...+.+..+|+.+ ++. ++ ..||+|+.-...-.-.++ ...+|.++.++|||||.|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0223455666554 442 22 279999974211111111 25799999999999999985
No 283
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.69 E-value=0.00025 Score=66.71 Aligned_cols=92 Identities=10% Similarity=-0.053 Sum_probs=64.1
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----CC----CcEEEeecccC---------------
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL----PAMIGSFASKQ--------------- 310 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g~----~~~~~~~d~~~--------------- 310 (474)
.++||||||| ..+..+++. . ...|+.+|.+++..+.|++. ++ ++.+..+++..
T Consensus 31 a~~VLEiGtG--ySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCEEEEECch--HHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 4789999985 677777764 1 46899999999999888753 54 35566666432
Q ss_pred CC--------C-CCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 311 LP--------Y-PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 311 Lp--------f-~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
++ . ..++||+|+.-.- .....+..+.+.|+|||++++-.
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEEeC
Confidence 22 2 2368999997632 22356666779999999996644
No 284
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.66 E-value=2.4e-05 Score=81.21 Aligned_cols=68 Identities=16% Similarity=0.039 Sum_probs=54.8
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc------CC-CcEEEeecccCC-CC-CCCCeeEEEec
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------GL-PAMIGSFASKQL-PY-PSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er------g~-~~~~~~~d~~~L-pf-~d~sFDlVvss 324 (474)
..+|||+|||+|..+..+++.+ ..|+++|+++.+++.|+++ ++ ++.+..+|+... +. ++++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 3789999999999999998875 4899999999999988765 44 466788887663 32 34689999985
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.65 E-value=0.00024 Score=79.05 Aligned_cols=104 Identities=15% Similarity=0.057 Sum_probs=70.4
Q ss_pred CceEEEECCCCchHHHHhhhcC--CceeEEEEecCCHHHHHHH--HHc--------CCCc-EEEeecccCC-CCCCCCee
Q 011964 254 VRTILDIGCGYGSFGAHLFSKE--LLTMCIANYEASGSQVQLT--LER--------GLPA-MIGSFASKQL-PYPSLSFD 319 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g--~~~~~v~giD~s~~~l~~A--~er--------g~~~-~~~~~d~~~L-pf~d~sFD 319 (474)
..+|||.|||+|.++..+++.. .....++|+|+++.+++.| +.. ++.. .+...+.... +...+.||
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 4689999999999999988752 1235789999999999888 322 2222 3333333332 23456899
Q ss_pred EEEecccccc-ccc--------------------------c-HHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 320 MLHCARCGVD-WDQ--------------------------K-DGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 320 lVvss~~l~~-~~~--------------------------d-~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+|+++--... +.. + ...++..+.+.|+|||++.+..|.
T Consensus 402 VVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 402 VVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred EEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 9999744211 100 0 124678899999999999999873
No 286
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.58 E-value=4.9e-05 Score=74.19 Aligned_cols=90 Identities=17% Similarity=0.056 Sum_probs=59.5
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHH-------c----C-C--CcEEEeecccC-CCCCCCCee
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE-------R----G-L--PAMIGSFASKQ-LPYPSLSFD 319 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~e-------r----g-~--~~~~~~~d~~~-Lpf~d~sFD 319 (474)
.+|||+|||+|..+..++.++ ..|+++|.++.+.+.+++ + + + ++.+..+|+.. ++....+||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g---~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG---CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT---CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 689999999999999999885 369999999976433322 1 1 2 35677777665 342234799
Q ss_pred EEEeccccccccccHHHHHHHHHhhcCCCc
Q 011964 320 MLHCARCGVDWDQKDGILLLEVDRVLKPGG 349 (474)
Q Consensus 320 lVvss~~l~~~~~d~~~~L~ei~RvLKPGG 349 (474)
+|++.-. ++... ...++++..++|++.+
T Consensus 167 vV~lDP~-y~~~~-~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPM-FPHKQ-KSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCC-CCCCC-C-----HHHHHHHHHS
T ss_pred EEEEcCC-CCCcc-cchHHHHHHHHHHHhh
Confidence 9998755 33322 2356777778887765
No 287
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.48 E-value=0.00028 Score=69.80 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=63.9
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHH---HcCCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTL---ERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~---erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
...+|||+||++|.|+..+++.. ....+.++|+...+..... ..+.++...........+..+.||+|+|..+ .+
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A-Pn 158 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG-ES 158 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCc-CC
Confidence 34799999999999999999862 3467889998653211000 0011222222122223456678999999744 22
Q ss_pred cc---ccH---HHHHHHHHhhcCCC-cEEEEEeCC
Q 011964 330 WD---QKD---GILLLEVDRVLKPG-GYFVWTSPL 357 (474)
Q Consensus 330 ~~---~d~---~~~L~ei~RvLKPG-G~lvis~~~ 357 (474)
-. .|. ..+|.-+.++|+|| |.|++-.+-
T Consensus 159 sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 159 SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 10 111 13566678899999 999998764
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.32 E-value=0.0003 Score=62.78 Aligned_cols=84 Identities=11% Similarity=0.050 Sum_probs=57.0
Q ss_pred CceEEEECCCCc-hHHHHhhh-cCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCC--CCeeEEEecccccc
Q 011964 254 VRTILDIGCGYG-SFGAHLFS-KELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPS--LSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG-~~~~~La~-~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d--~sFDlVvss~~l~~ 329 (474)
..+|||||||.| ..+..|++ .+ ..|+++|+++..++ +...|..+ |..+ ..||+|++...-
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g---~~V~atDInp~Av~----------~v~dDiF~-P~~~~Y~~~DLIYsirPP-- 99 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSK---VDLVLTDIKPSHGG----------IVRDDITS-PRMEIYRGAALIYSIRPP-- 99 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSC---CEEEEECSSCSSTT----------EECCCSSS-CCHHHHTTEEEEEEESCC--
T ss_pred CCcEEEEccCCChHHHHHHHHhCC---CeEEEEECCccccc----------eEEccCCC-CcccccCCcCEEEEcCCC--
Confidence 369999999999 59999997 65 47899999986655 55555544 3332 379999987542
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
.+....+.++.+-. |.-++|....
T Consensus 100 --~El~~~i~~lA~~v--~adliI~pL~ 123 (153)
T 2k4m_A 100 --AEIHSSLMRVADAV--GARLIIKPLT 123 (153)
T ss_dssp --TTTHHHHHHHHHHH--TCEEEEECBT
T ss_pred --HHHHHHHHHHHHHc--CCCEEEEcCC
Confidence 33344555555432 5667776543
No 289
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.31 E-value=0.0014 Score=66.81 Aligned_cols=105 Identities=15% Similarity=0.097 Sum_probs=74.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----C-------CCcEEEeecccCCC-CCCCCeeEEE
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-------LPAMIGSFASKQLP-YPSLSFDMLH 322 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g-------~~~~~~~~d~~~Lp-f~d~sFDlVv 322 (474)
.+|||+.+|.|.=+.++++.+ ....|+++|+++.-++..+++ + .++.+...|...++ +..+.||.|+
T Consensus 150 ~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VL 228 (359)
T 4fzv_A 150 DIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVL 228 (359)
T ss_dssp EEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEE
T ss_pred CEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEE
Confidence 799999999999999998874 345799999999877655432 2 24556666766554 4557899999
Q ss_pred e----ccc---ccc--------ccc--------cHHHHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 323 C----ARC---GVD--------WDQ--------KDGILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 323 s----s~~---l~~--------~~~--------d~~~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
+ +.. ... +.. -+..+|....+.|||||+++.++-....
T Consensus 229 lDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 229 VDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp EECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred ECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 5 321 111 100 1136788899999999999999976654
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.17 E-value=0.00072 Score=69.32 Aligned_cols=101 Identities=13% Similarity=0.033 Sum_probs=70.4
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC-------------CcEEEeecccCC----CCCC
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------------PAMIGSFASKQL----PYPS 315 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~-------------~~~~~~~d~~~L----pf~d 315 (474)
.+++||=||.|.|..+..+++... ..++.+|+++..++.+++.-. .+.+...|+... .-..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~--~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhcCC--ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 357999999999999999998743 689999999999999987521 134444443221 1134
Q ss_pred CCeeEEEecccccccccc---------HHHHHHHHHhhcCCCcEEEEEe
Q 011964 316 LSFDMLHCARCGVDWDQK---------DGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 316 ~sFDlVvss~~l~~~~~d---------~~~~L~ei~RvLKPGG~lvis~ 355 (474)
+.||+|+.-..-.....+ ...+++.+++.|+|||+++...
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 579999975221110011 1367889999999999998854
No 291
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.12 E-value=0.005 Score=60.69 Aligned_cols=134 Identities=12% Similarity=0.069 Sum_probs=80.9
Q ss_pred CceEEEECCCCchHHHHhhhc----CCceeEEEEecCCHH--------------------------HHHHHHH----cCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSK----ELLTMCIANYEASGS--------------------------QVQLTLE----RGL 299 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~----g~~~~~v~giD~s~~--------------------------~l~~A~e----rg~ 299 (474)
++.|||+|+..|..+..++.. +.....|+++|..+. .++.+++ .++
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 478999999999998887643 112356777775311 1233333 244
Q ss_pred ---CcEEEeecccC-CC-CCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHH
Q 011964 300 ---PAMIGSFASKQ-LP-YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWN 374 (474)
Q Consensus 300 ---~~~~~~~d~~~-Lp-f~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~ 374 (474)
.+.+..+++.+ +| +++++||+|+.-.- ........|..+.+.|+|||++++-+... + .... +
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~DD~~~-~------~G~~---~ 253 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIVDDYMM-C------PPCK---D 253 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEESSCTT-C------HHHH---H
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEEcCCCC-C------HHHH---H
Confidence 46677776543 44 45678999997632 11223468999999999999999977632 1 1122 3
Q ss_pred HHHHHHHhhCceEEee--ecceeEEeec
Q 011964 375 FVRDFVENLCWELVSQ--QDETVVWKKT 400 (474)
Q Consensus 375 ~~~~la~~l~W~~~~~--~~~~~iw~k~ 400 (474)
.++++.+..++..... ......|+|.
T Consensus 254 Av~Ef~~~~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 254 AVDEYRAKFDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp HHHHHHHHTTCCSCCEECSSSCEEEECC
T ss_pred HHHHHHHhcCCceEEEEecCEEEEEEeC
Confidence 4455666666543332 2334556553
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.99 E-value=0.009 Score=59.06 Aligned_cols=101 Identities=19% Similarity=0.210 Sum_probs=64.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHH---HHHHcCCC-cEEEee-cccCCCCCCCCeeEEEecccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ---LTLERGLP-AMIGSF-ASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~---~A~erg~~-~~~~~~-d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.+||||||++|.|+.+.+... .+..|.++|+-..-.+ ..++.+-+ +.+... |+..++- ..+|+|+|--. ..
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig-eS 171 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG-ES 171 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC-CC
T ss_pred CEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc-cC
Confidence 699999999999999877663 3458999999764110 00011111 334433 5555543 56999998644 22
Q ss_pred ccccH----H---HHHHHHHhhcCCC-cEEEEEeCCCCc
Q 011964 330 WDQKD----G---ILLLEVDRVLKPG-GYFVWTSPLTNP 360 (474)
Q Consensus 330 ~~~d~----~---~~L~ei~RvLKPG-G~lvis~~~~~~ 360 (474)
- .++ . .+|.-+.+.|++| |-|++-.+.+..
T Consensus 172 s-~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~ 209 (321)
T 3lkz_A 172 S-SSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM 209 (321)
T ss_dssp C-SCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS
T ss_pred C-CChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC
Confidence 1 221 1 3566678899999 999998876643
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.80 E-value=0.0054 Score=59.55 Aligned_cols=100 Identities=17% Similarity=0.169 Sum_probs=57.7
Q ss_pred CceEEEECCCCchHHHHhhhc-CCc--eeEEEEecCCHHHHHHHHH-cCCCc-EEEee-cccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSK-ELL--TMCIANYEASGSQVQLTLE-RGLPA-MIGSF-ASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~-g~~--~~~v~giD~s~~~l~~A~e-rg~~~-~~~~~-d~~~Lpf~d~sFDlVvss~~l 327 (474)
..+|||+||++|.|+.+.++. ++. ...++++|.. +...... .++.+ .+..+ |...+ +...+|+|+|-.+-
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~--~~P~~~~~~Gv~~i~~~~G~Df~~~--~~~~~DvVLSDMAP 149 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGH--EEPMLMQSYGWNIVTMKSGVDVFYK--PSEISDTLLCDIGE 149 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTS--CCCCCCCSTTGGGEEEECSCCGGGS--CCCCCSEEEECCCC
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccc--cCCCcccCCCceEEEeeccCCccCC--CCCCCCEEEeCCCC
Confidence 379999999999999999886 221 1233445521 0000000 12222 23334 66553 34579999986432
Q ss_pred c--cccccHH---HHHHHHHhhcCCCc-EEEEEeCC
Q 011964 328 V--DWDQKDG---ILLLEVDRVLKPGG-YFVWTSPL 357 (474)
Q Consensus 328 ~--~~~~d~~---~~L~ei~RvLKPGG-~lvis~~~ 357 (474)
- +...|.. .+|.-+.++|+||| .|++-.+.
T Consensus 150 nSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 150 SSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 1 1111222 25666678999999 99997775
No 294
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.69 E-value=0.0042 Score=61.17 Aligned_cols=82 Identities=7% Similarity=0.011 Sum_probs=61.6
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC--CCcEEEeecc
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--LPAMIGSFAS 308 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg--~~~~~~~~d~ 308 (474)
.-..+.+.+.+...++ ..+||.+||.|..+..+++++ ..++|+|.++.+++.|++ - ..+.+...+.
T Consensus 8 pVLl~e~le~L~~~~g--------g~~VD~T~G~GGHS~~il~~~---g~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f 75 (285)
T 1wg8_A 8 PVLYQEALDLLAVRPG--------GVYVDATLGGAGHARGILERG---GRVIGLDQDPEAVARAKG-LHLPGLTVVQGNF 75 (285)
T ss_dssp CTTHHHHHHHHTCCTT--------CEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHH-TCCTTEEEEESCG
T ss_pred hHHHHHHHHhhCCCCC--------CEEEEeCCCCcHHHHHHHHCC---CEEEEEeCCHHHHHHHHh-hccCCEEEEECCc
Confidence 4455667777766555 789999999999999999973 589999999999999987 3 1456666666
Q ss_pred cCCC-----CCCCCeeEEEec
Q 011964 309 KQLP-----YPSLSFDMLHCA 324 (474)
Q Consensus 309 ~~Lp-----f~d~sFDlVvss 324 (474)
..++ ...++||.|++.
T Consensus 76 ~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 76 RHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp GGHHHHHHHTTCSCEEEEEEE
T ss_pred chHHHHHHHcCCCCcCEEEeC
Confidence 6553 223579999864
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.67 E-value=0.014 Score=62.47 Aligned_cols=118 Identities=21% Similarity=0.208 Sum_probs=77.4
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhc----CC--------ceeEEEEecCCHHHHHHHHHc-
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSK----EL--------LTMCIANYEASGSQVQLTLER- 297 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~----g~--------~~~~v~giD~s~~~l~~A~er- 297 (474)
...++.+.+++....+ .+|+|-.||+|.|.....+. .. ....+.|.|+++.+...|+-+
T Consensus 203 ~~Vv~lmv~l~~p~~~--------~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 203 RPVVRFMVEVMDPQLG--------ESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp HHHHHHHHHHHCCCTT--------CCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCC--------CEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 4556677777654443 68999999999998766432 10 124689999999999888753
Q ss_pred ---CCC-cEEEeecccCCCC----CCCCeeEEEeccccc-ccc-------------ccH-HHHHHHHHhhcC-------C
Q 011964 298 ---GLP-AMIGSFASKQLPY----PSLSFDMLHCARCGV-DWD-------------QKD-GILLLEVDRVLK-------P 347 (474)
Q Consensus 298 ---g~~-~~~~~~d~~~Lpf----~d~sFDlVvss~~l~-~~~-------------~d~-~~~L~ei~RvLK-------P 347 (474)
++. ..+...|....|+ +...||+|+++--+- .+. .+. -.++..+.+.|| |
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~ 354 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN 354 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS
T ss_pred HhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC
Confidence 443 4455556544442 234799999973321 110 111 245677778776 7
Q ss_pred CcEEEEEeC
Q 011964 348 GGYFVWTSP 356 (474)
Q Consensus 348 GG~lvis~~ 356 (474)
||++.+..|
T Consensus 355 gGr~avVlP 363 (530)
T 3ufb_A 355 GGRAAVVVP 363 (530)
T ss_dssp CCEEEEEEE
T ss_pred CceEEEEec
Confidence 999999887
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.43 E-value=0.046 Score=52.48 Aligned_cols=102 Identities=19% Similarity=0.171 Sum_probs=64.7
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHH---HHHHcCC-CcEEEee-cccCCCCCCCCeeEEEecccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ---LTLERGL-PAMIGSF-ASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~---~A~erg~-~~~~~~~-d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.+|||+||++|.|+.+.+... .+..|.++|+-..-.+ ..+..|- .+.+... |...++- ..+|+|+|-..-..
T Consensus 80 ~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~--~~~DtllcDIgeSs 156 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP--EKCDTLLCDIGESS 156 (267)
T ss_dssp EEEEEESCTTSHHHHHHHTST-TEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC--CCCSEEEECCCCCC
T ss_pred CEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCC--ccccEEEEecCCCC
Confidence 699999999999999877663 3458999998653221 0011122 2456655 6555543 56999999643211
Q ss_pred ccc--cHH---HHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 330 WDQ--KDG---ILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 330 ~~~--d~~---~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
-.+ +.. .+|.-+.+.|++ |-|++-.+.+..
T Consensus 157 ~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 157 PSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred CChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 111 111 366667889999 788887776554
No 297
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.20 E-value=0.0013 Score=82.09 Aligned_cols=103 Identities=13% Similarity=0.185 Sum_probs=49.2
Q ss_pred CceEEEECCCCchHHHHhhhc----CCceeEEEEecCCHHHHHHHHHcC--CCcEEEeecccCC-CCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSK----ELLTMCIANYEASGSQVQLTLERG--LPAMIGSFASKQL-PYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~----g~~~~~v~giD~s~~~l~~A~erg--~~~~~~~~d~~~L-pf~d~sFDlVvss~~ 326 (474)
..+|||||.|+|..+..+.+. .....+++-.|+|+...+.|+++- +.+.....+.... ++...+||+|+++.+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 368999999999876554332 111356777899876665555441 1222222232222 445678999999987
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+ |-..+....|.+++++|||||++++.+..
T Consensus 1321 l-~~t~~~~~~l~~~~~lL~p~G~l~~~e~~ 1350 (2512)
T 2vz8_A 1321 L-ATLGDPAVAVGNMAATLKEGGFLLLHTLL 1350 (2512)
T ss_dssp ---------------------CCEEEEEEC-
T ss_pred c-cccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence 4 55567778999999999999999998753
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.06 E-value=0.0088 Score=58.87 Aligned_cols=40 Identities=23% Similarity=0.050 Sum_probs=36.3
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER 297 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er 297 (474)
..|||++||+|..+..+++.| ..++++|+++.+++.|+++
T Consensus 237 ~~vlD~f~GsGt~~~~a~~~g---~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 237 DVVLDPFAGTGTTLIAAARWG---RRALGVELVPRYAQLAKER 276 (297)
T ss_dssp CEEEETTCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHH
Confidence 689999999999999998876 4789999999999998876
No 299
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.89 E-value=0.16 Score=50.94 Aligned_cols=70 Identities=14% Similarity=0.159 Sum_probs=54.6
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC---CCCCCeeEEEec
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP---YPSLSFDMLHCA 324 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp---f~d~sFDlVvss 324 (474)
.+|||+-||.|.++..+...|+....+.++|+++.+++..+.+.....+...|+..+. ++...+|+|+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 5799999999999999998875445789999999999988887655556666776654 122258999976
No 300
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=93.53 E-value=0.21 Score=49.64 Aligned_cols=117 Identities=21% Similarity=0.198 Sum_probs=65.8
Q ss_pred ceEEEECCCCchHHHHhhh----cCC-ceeEEEEecCC------------HHHHHHHHHc-----C--CCcEEEeecccC
Q 011964 255 RTILDIGCGYGSFGAHLFS----KEL-LTMCIANYEAS------------GSQVQLTLER-----G--LPAMIGSFASKQ 310 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~----~g~-~~~~v~giD~s------------~~~l~~A~er-----g--~~~~~~~~d~~~ 310 (474)
-+|||+|-|+|.++..... .+. ....++.+|.. ....+...++ + +...+..+|+..
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 5799999999997654321 121 22455555531 2222222222 1 122334445433
Q ss_pred -CC-CCCCCeeEEEeccccccccccH----HHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhC
Q 011964 311 -LP-YPSLSFDMLHCARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLC 384 (474)
Q Consensus 311 -Lp-f~d~sFDlVvss~~l~~~~~d~----~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~ 384 (474)
++ +++..||+|+.-. +.-..++ ..+|+.|+++++|||.|+- .... ..++.-++..|
T Consensus 178 ~l~~l~~~~~Da~flDg--FsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Ytaa--------------g~VRR~L~~aG 239 (308)
T 3vyw_A 178 RIKEVENFKADAVFHDA--FSPYKNPELWTLDFLSLIKERIDEKGYWVS--YSSS--------------LSVRKSLLTLG 239 (308)
T ss_dssp HGGGCCSCCEEEEEECC--SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SCCC--------------HHHHHHHHHTT
T ss_pred HHhhhcccceeEEEeCC--CCcccCcccCCHHHHHHHHHHhCCCcEEEE--EeCc--------------HHHHHHHHHCC
Confidence 33 4556899999742 1111233 4799999999999998874 3221 23455667778
Q ss_pred ceEEe
Q 011964 385 WELVS 389 (474)
Q Consensus 385 W~~~~ 389 (474)
|+.-.
T Consensus 240 F~V~k 244 (308)
T 3vyw_A 240 FKVGS 244 (308)
T ss_dssp CEEEE
T ss_pred CEEEe
Confidence 87654
No 301
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.84 E-value=0.14 Score=51.44 Aligned_cols=93 Identities=13% Similarity=0.062 Sum_probs=64.0
Q ss_pred CceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----CCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----PYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----pf~d~sFDlVvss~~ 326 (474)
..+||-+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|....+.. ...++ ...++.||+|+-.-.
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~-~~~~~~~~~~~~~~gg~D~vid~~g 267 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGA--SIIIAVDIVESRLELAKQLGATHVINS-KTQDPVAAIKEITDGGVNFALESTG 267 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTC--SEEEEEESCHHHHHHHHHHTCSEEEET-TTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC--CeEEEECCCHHHHHHHHHcCCCEEecC-CccCHHHHHHHhcCCCCcEEEECCC
Confidence 37899999886 7777777765 32 258889999999999988886443321 11110 112236999985422
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
....+.+..+.|+|||.+++...
T Consensus 268 -------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 268 -------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp -------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred -------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 13478899999999999998654
No 302
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.74 E-value=0.76 Score=45.87 Aligned_cols=128 Identities=5% Similarity=0.025 Sum_probs=79.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEE-EEecCCHHHHHHHHHcCCCcEEEeecccCCC---CCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCI-ANYEASGSQVQLTLERGLPAMIGSFASKQLP---YPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v-~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp---f~d~sFDlVvss~~l~~ 329 (474)
..+++|+-||.|.+...+.+.|+....+ .++|+++..++..+.+.... +...|+..+. ++...+|+++.+.-=-.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQP 88 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCTT
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCccC
Confidence 3589999999999999998887533456 79999999888776653222 3445665553 22236899997532011
Q ss_pred c----------cccH-HHHHHHHHh-hcCC---CcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 330 W----------DQKD-GILLLEVDR-VLKP---GGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 330 ~----------~~d~-~~~L~ei~R-vLKP---GG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
+ ..|. ..++.++.| +++. .-.+++.+-+..-. ....+..+...++.+++....
T Consensus 89 fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~-------~~~~~~~i~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 89 YNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFK-------ESLVFKEIYNILIKNQYYIKD 156 (327)
T ss_dssp CSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGG-------GSHHHHHHHHHHHHTTCEEEE
T ss_pred cccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhc-------ChHHHHHHHHHHHhCCCEEEE
Confidence 1 1233 367778777 6542 23456666554321 113466667777777776543
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=92.73 E-value=0.13 Score=50.99 Aligned_cols=96 Identities=8% Similarity=-0.058 Sum_probs=57.6
Q ss_pred CCceEEEECC------CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 253 GVRTILDIGC------GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 253 ~~~~VLDIGC------GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
...+|||+|+ -+|++. +.+.+.....++++|+.+-. .....+..+|...+. ..+.||+|+|-.+
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~-------sda~~~IqGD~~~~~-~~~k~DLVISDMA 178 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFV-------SDADSTLIGDCATVH-TANKWDLIISDMY 178 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCB-------CSSSEEEESCGGGEE-ESSCEEEEEECCC
T ss_pred CCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCcccc-------cCCCeEEEccccccc-cCCCCCEEEecCC
Confidence 4589999996 667742 22222222368888887632 112244667754433 2478999998421
Q ss_pred c---cccc-cc------HHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 327 G---VDWD-QK------DGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 327 l---~~~~-~d------~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
- -+.. +. .+.++.-+.++|+|||.|++-.+--
T Consensus 179 PNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 179 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp CTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 0 0110 11 2456777788999999999987643
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.65 E-value=0.2 Score=47.96 Aligned_cols=41 Identities=12% Similarity=-0.042 Sum_probs=36.4
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER 297 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er 297 (474)
...|||..||+|..+....+.| ..++++|+++..++.|++|
T Consensus 213 ~~~vlD~f~GsGtt~~~a~~~g---r~~ig~e~~~~~~~~~~~r 253 (260)
T 1g60_A 213 NDLVLDCFMGSGTTAIVAKKLG---RNFIGCDMNAEYVNQANFV 253 (260)
T ss_dssp TCEEEESSCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHH
Confidence 3689999999999999988876 4789999999999998876
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=92.32 E-value=2.4 Score=43.03 Aligned_cols=123 Identities=8% Similarity=-0.008 Sum_probs=78.1
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCC--------CCCCeeEEEeccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPY--------PSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf--------~d~sFDlVvss~~ 326 (474)
.+|+|+-||.|.++..+.+.|+ ..+.++|+++..++..+.+.....+...|+..+.. ....+|+|+...-
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~--~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF--DVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC--EEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC--cEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 4799999999999999988885 45779999999998887775556666677766631 3457999997532
Q ss_pred ccc-c-------cccHH-HHHHH---HHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceE
Q 011964 327 GVD-W-------DQKDG-ILLLE---VDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWEL 387 (474)
Q Consensus 327 l~~-~-------~~d~~-~~L~e---i~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~ 387 (474)
|. + ..|.. .++.+ +...++|.- ++.+-+..-. .......++.+. ..+.+++..
T Consensus 81 -CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~--~v~ENV~gl~----s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 81 -CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLF--FLAENVPGIM----QEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp -CCTTC-------CHHHHHHHHHHHHHHHHHCCSE--EEEEECTTTT----CGGGHHHHHHHH-HHHHTTEEE
T ss_pred -CCCcccccCCCCCCchHHHHHHHHHHHHHhCCCE--EEEecchHhh----ccCcHHHHHHHH-HHHcCCCcc
Confidence 11 1 12222 34444 444567853 3444333221 112234556666 667777776
No 306
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.06 E-value=0.43 Score=47.57 Aligned_cols=93 Identities=11% Similarity=0.054 Sum_probs=62.7
Q ss_pred ceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEee--cccC----C-CCCCCCeeEEEecc
Q 011964 255 RTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSF--ASKQ----L-PYPSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~--d~~~----L-pf~d~sFDlVvss~ 325 (474)
.+||-+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|....+... +..+ + ....+.||+|+-.-
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMGA--AQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 7899999875 7777777765 32 2788999999999999988865333211 0001 0 00014699998542
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ....+.+..++|+|||.+++...
T Consensus 251 g-------~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 G-------AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp C-------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred C-------ChHHHHHHHHHhcCCCEEEEEec
Confidence 1 13467888999999999998754
No 307
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=91.91 E-value=0.18 Score=50.76 Aligned_cols=85 Identities=9% Similarity=-0.031 Sum_probs=58.2
Q ss_pred hhhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-CCCcEEEeeccc
Q 011964 231 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-GLPAMIGSFASK 309 (474)
Q Consensus 231 ~~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-g~~~~~~~~d~~ 309 (474)
.-..+++.+.+...++ ..++|..||.|..+..+++.-.....++++|.++.+++.|++. .-.+.+...+..
T Consensus 43 pVLl~Evl~~L~i~pg--------giyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~ 114 (347)
T 3tka_A 43 TVLLDEAVNGLNIRPD--------GIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFS 114 (347)
T ss_dssp CTTTHHHHHHTCCCTT--------CEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGG
T ss_pred cccHHHHHHhhCCCCC--------CEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHH
Confidence 3445666666665555 7899999999999999998732346899999999999988421 123455555544
Q ss_pred CCC--CC----CCCeeEEEe
Q 011964 310 QLP--YP----SLSFDMLHC 323 (474)
Q Consensus 310 ~Lp--f~----d~sFDlVvs 323 (474)
.+. ++ .+++|.|+.
T Consensus 115 ~l~~~L~~~g~~~~vDgILf 134 (347)
T 3tka_A 115 ALGEYVAERDLIGKIDGILL 134 (347)
T ss_dssp GHHHHHHHTTCTTCEEEEEE
T ss_pred HHHHHHHhcCCCCcccEEEE
Confidence 432 11 136888886
No 308
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.73 E-value=0.57 Score=47.48 Aligned_cols=98 Identities=13% Similarity=0.041 Sum_probs=64.4
Q ss_pred ceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-C-----C-CCCCeeEEEecc
Q 011964 255 RTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-P-----Y-PSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-p-----f-~d~sFDlVvss~ 325 (474)
.+||-+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|.. +......+. . . ....||+|+-.-
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~ 262 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLLGA--ACVIVGDQNPERLKLLSDAGFE--TIDLRNSAPLRDQIDQILGKPEVDCGVDAV 262 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--SEEEEEESCHHHHHHHHTTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CEEEEEcCCHHHHHHHHHcCCc--EEcCCCcchHHHHHHHHhCCCCCCEEEECC
Confidence 7899999986 7888888775 32 2788999999999999887752 322211111 0 1 123699998653
Q ss_pred ccccc-------cccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDW-------DQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~-------~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
..... ..+....+.+..+.|+|||.+++...
T Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 263 GFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp CTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 21100 00123478899999999999987654
No 309
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.65 E-value=0.27 Score=48.10 Aligned_cols=97 Identities=14% Similarity=0.134 Sum_probs=54.4
Q ss_pred cEEEeecccC-CC-CCCCCeeEEEeccccccc-------------------cccHHHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 301 AMIGSFASKQ-LP-YPSLSFDMLHCARCGVDW-------------------DQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 301 ~~~~~~d~~~-Lp-f~d~sFDlVvss~~l~~~-------------------~~d~~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
..+.++|... ++ +++++||+|+++--.... ......++.++.|+|||||.+++......
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~ 101 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVA 101 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEE
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 4566666554 32 567899999997432111 01123567899999999999988754221
Q ss_pred chhhhhhHH-HHHHHHHHHHHHHhhCceEEeeecceeEEeecC
Q 011964 360 PQAFLRNKE-NQKRWNFVRDFVENLCWELVSQQDETVVWKKTS 401 (474)
Q Consensus 360 ~~~~~~~~e-~~~~w~~~~~la~~l~W~~~~~~~~~~iw~k~~ 401 (474)
......... ....+..+..+.+..+|.... ..||.|..
T Consensus 102 ~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~----~iiW~K~~ 140 (297)
T 2zig_A 102 VARRRFGRHLVFPLHADIQVRCRKLGFDNLN----PIIWHKHT 140 (297)
T ss_dssp EECC----EEEECHHHHHHHHHHHTTCEEEE----EEEEECC-
T ss_pred cccccCCcccccccHHHHHHHHHHcCCeeec----cEEEeCCC
Confidence 000000000 001234556667778886543 46898864
No 310
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.55 E-value=0.2 Score=45.32 Aligned_cols=89 Identities=16% Similarity=0.177 Sum_probs=58.6
Q ss_pred CceEEEECC--CCchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC--------CCCCCeeEEE
Q 011964 254 VRTILDIGC--GYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP--------YPSLSFDMLH 322 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp--------f~d~sFDlVv 322 (474)
..+||.+|+ |.|..+..++.. | ..+++++.+++.++.+++.+....+ +..... ...+.+|+|+
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSDAKREMLSRLGVEYVG---DSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHTTCCSEEE---ETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHcCCCEEe---eCCcHHHHHHHHHHhCCCCCeEEE
Confidence 378999995 456666665544 4 4688889999888887766643222 211111 1224699998
Q ss_pred eccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 323 CARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 323 ss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.+.. ...+.+..+.|+|||.+++...
T Consensus 113 ~~~g--------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 113 NSLA--------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp ECCC--------THHHHHHHHTEEEEEEEEECSC
T ss_pred ECCc--------hHHHHHHHHHhccCCEEEEEcC
Confidence 6521 1368889999999999998653
No 311
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=91.15 E-value=0.49 Score=47.84 Aligned_cols=76 Identities=17% Similarity=0.147 Sum_probs=50.8
Q ss_pred hhHHHHHHHHhccccccccccCCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc--CCCcEEEeeccc
Q 011964 232 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER--GLPAMIGSFASK 309 (474)
Q Consensus 232 ~~~~~l~~~l~~~~g~~l~~~~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er--g~~~~~~~~d~~ 309 (474)
...+.|.+.+....+ ........|||||.|.|.+|..|++.. ....++++|+++.++...++. .-+..+..+|+.
T Consensus 39 ~i~~~Iv~~~~l~~~--~~~~~~~~VlEIGPG~G~LT~~Ll~~~-~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l 115 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKT--YKHPEELKVLDLYPGVGIQSAIFYNKY-CPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPY 115 (353)
T ss_dssp HHHHHHHHHHCGGGT--CCCTTTCEEEEESCTTCHHHHHHHHHH-CCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTT
T ss_pred HHHHHHHHhccCCcc--cCcCCCCEEEEECCCCCHHHHHHHhhC-CCCEEEEEecCHHHHHHHHHhccCCCEEEEECCcc
Confidence 455667666654321 000023689999999999999999752 124689999999998877664 234667767764
Q ss_pred C
Q 011964 310 Q 310 (474)
Q Consensus 310 ~ 310 (474)
.
T Consensus 116 ~ 116 (353)
T 1i4w_A 116 D 116 (353)
T ss_dssp C
T ss_pred c
Confidence 3
No 312
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.63 E-value=0.95 Score=44.89 Aligned_cols=93 Identities=12% Similarity=0.040 Sum_probs=62.0
Q ss_pred ceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CC---CCCeeEEEec
Q 011964 255 RTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YP---SLSFDMLHCA 324 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~---d~sFDlVvss 324 (474)
.+||-+|+|. |.++..+++.. ...|+++|.+++.++.+++.|....+...+..++. .. .+.||+|+-.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 7899999874 66777777652 23588899999999999887765333211101110 11 2469999855
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.. ....+.+..+.|+|||.+++...
T Consensus 248 ~g-------~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 248 SG-------NEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SC-------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred CC-------CHHHHHHHHHHHhcCCEEEEEec
Confidence 22 13467888999999999998754
No 313
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.56 E-value=0.28 Score=48.76 Aligned_cols=90 Identities=14% Similarity=0.089 Sum_probs=63.5
Q ss_pred CceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
..+||-+|+|. |.++..+++.. ...+++++.+++.++.+++.|....+ .+...+ .. .||+|+-... .
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~v~--~~~~~~--~~-~~D~vid~~g-~---- 244 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALSMGVKHFY--TDPKQC--KE-ELDFIISTIP-T---- 244 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHHTTCSEEE--SSGGGC--CS-CEEEEEECCC-S----
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcCCCeec--CCHHHH--hc-CCCEEEECCC-c----
Confidence 37899999875 77777777652 24788999999889999888865544 232222 22 7999985422 1
Q ss_pred cHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 333 KDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 333 d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
...+....+.|+|||.+++....
T Consensus 245 --~~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 245 --HYDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp --CCCHHHHHTTEEEEEEEEECCCC
T ss_pred --HHHHHHHHHHHhcCCEEEEECCC
Confidence 12567888999999999987643
No 314
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.33 E-value=0.63 Score=46.75 Aligned_cols=93 Identities=17% Similarity=0.164 Sum_probs=64.0
Q ss_pred ceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccC--------CCCCCCCeeEEEec
Q 011964 255 RTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ--------LPYPSLSFDMLHCA 324 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~--------Lpf~d~sFDlVvss 324 (474)
.+||=+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|....+.. ...+ .....+.||+|+-.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~-~~~~~~~~i~~~~~~~~gg~Dvvid~ 260 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAGA--TTVILSTRQATKRRLAEEVGATATVDP-SAGDVVEAIAGPVGLVPGGVDVVIEC 260 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHTCSEEECT-TSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHcCCCEEECC-CCcCHHHHHHhhhhccCCCCCEEEEC
Confidence 7889899865 6677777765 32 378889999999999998886543321 1111 01223479999854
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
-. ....+.+..+.|++||.+++....
T Consensus 261 ~G-------~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 261 AG-------VAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp SC-------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred CC-------CHHHHHHHHHHhccCCEEEEEecc
Confidence 21 134788999999999999987643
No 315
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.89 E-value=0.47 Score=46.66 Aligned_cols=92 Identities=15% Similarity=0.086 Sum_probs=60.1
Q ss_pred CceEEEECC--CCchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----CCCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----PYPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----pf~d~sFDlVvss~ 325 (474)
..+||-+|+ |.|..+..++.. | ..++++|.+++.++.+++.+....+...+..++ ....+.+|+|+.+.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 222 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV 222 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 378999998 566666666654 4 478888999988888866665332211110111 01124799998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ...+.+..+.|+|||.+++...
T Consensus 223 g--------~~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 223 G--------GEFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp C--------HHHHHHHHTTEEEEEEEEECCC
T ss_pred C--------hHHHHHHHHHHhcCCEEEEEec
Confidence 2 1357888999999999988653
No 316
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=89.83 E-value=0.41 Score=47.58 Aligned_cols=93 Identities=16% Similarity=0.099 Sum_probs=63.0
Q ss_pred ceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----C-CCCCCeeEEEecccc
Q 011964 255 RTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----P-YPSLSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----p-f~d~sFDlVvss~~l 327 (474)
.+||=+|+|. |.++..+++... ...|+++|.+++.++.+++.|....+.. ...++ . .....||+|+-...
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~lGa~~vi~~-~~~~~~~~v~~~t~g~g~D~v~d~~g- 244 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALEYGATDIINY-KNGDIVEQILKATDGKGVDKVVIAGG- 244 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHHHTCCEEECG-GGSCHHHHHHHHTTTCCEEEEEECSS-
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHHhCCceEEcC-CCcCHHHHHHHHcCCCCCCEEEECCC-
Confidence 7899999875 777777776521 1268889999999999998886543321 11111 0 12336999985422
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ...+.+..+.|+|||.+++...
T Consensus 245 ----~--~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 245 ----D--VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp ----C--TTHHHHHHHHEEEEEEEEECCC
T ss_pred ----C--hHHHHHHHHHHhcCCEEEEecc
Confidence 1 2378889999999999998764
No 317
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.36 E-value=0.57 Score=47.37 Aligned_cols=97 Identities=12% Similarity=0.054 Sum_probs=64.6
Q ss_pred ceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccC-----C-C-CCCCCeeEEEecc
Q 011964 255 RTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ-----L-P-YPSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~-----L-p-f~d~sFDlVvss~ 325 (474)
.+||-+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|.. ........ + . .....||+|+-.-
T Consensus 187 ~~VlV~GaG~vG~~aiqlAk~~Ga--~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~ 262 (398)
T 1kol_A 187 STVYVAGAGPVGLAAAASARLLGA--AVVIVGDLNPARLAHAKAQGFE--IADLSLDTPLHEQIAALLGEPEVDCAVDAV 262 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHcCCc--EEccCCcchHHHHHHHHhCCCCCCEEEECC
Confidence 7899999875 7777788775 32 3688899999999999888763 22211111 0 0 1123699998653
Q ss_pred ccc---------cccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGV---------DWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~---------~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
..- ++ .++...+.+..++|++||.+++...
T Consensus 263 G~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 263 GFEARGHGHEGAKH-EAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp CTTCBCSSTTGGGS-BCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCcccccccccccc-cchHHHHHHHHHHHhcCCEEEEecc
Confidence 211 11 2334578999999999999988653
No 318
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=88.58 E-value=0.89 Score=49.43 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=59.1
Q ss_pred ceEEEECCCCchHHHHhhhc-----------CCceeEEEEecC---CHHHHHHHHHc---------------C-------
Q 011964 255 RTILDIGCGYGSFGAHLFSK-----------ELLTMCIANYEA---SGSQVQLTLER---------------G------- 298 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~-----------g~~~~~v~giD~---s~~~l~~A~er---------------g------- 298 (474)
-+|||+|.|+|.+.....+. .....+++.+|. +.+.+..+... .
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 48999999999988776442 112467888887 77777644331 0
Q ss_pred --------CCcEEEeecccC----CCCC-CCCeeEEEecccccccccc--HHHHHHHHHhhcCCCcEEEE
Q 011964 299 --------LPAMIGSFASKQ----LPYP-SLSFDMLHCARCGVDWDQK--DGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 299 --------~~~~~~~~d~~~----Lpf~-d~sFDlVvss~~l~~~~~d--~~~~L~ei~RvLKPGG~lvi 353 (474)
+...+..+|+.. ++.. +..||+++.-...-.-.++ ...++.++.++++|||.+.-
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 011122223221 1211 4679999874211111111 14799999999999998764
No 319
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.57 E-value=0.5 Score=46.77 Aligned_cols=94 Identities=12% Similarity=0.118 Sum_probs=62.4
Q ss_pred ceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeec----ccCCCCCCCCeeEEEecccccc
Q 011964 255 RTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFA----SKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d----~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.+||-+|+|. |.++..+++.......|++++.+++.++.+++.|....+...+ ...+. ....||+|+-.-.
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~~g--- 247 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDLVG--- 247 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEESSC---
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEECCC---
Confidence 7899999864 6677777765200246899999999999998877543332111 01111 1236999986522
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
....+.+..++|+|||.+++...
T Consensus 248 ----~~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 248 ----TEETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp ----CHHHHHHHHHHEEEEEEEEECCC
T ss_pred ----ChHHHHHHHHHhhcCCEEEEeCC
Confidence 13478889999999999988654
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=88.21 E-value=0.46 Score=46.90 Aligned_cols=92 Identities=9% Similarity=0.070 Sum_probs=64.4
Q ss_pred CceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCC------CCCCeeEEEeccc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPY------PSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf------~d~sFDlVvss~~ 326 (474)
..+||-+|+|. |.++..+++.. ...++++|.+++.++.+++.|....+.. ....+ ..+.+|+|+-...
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~---~~~~~~~~~~~~~g~~d~vid~~g 241 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARRLGAEVAVNA---RDTDPAAWLQKEIGGAHGVLVTAV 241 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEET---TTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCEEEeC---CCcCHHHHHHHhCCCCCEEEEeCC
Confidence 37888899875 88888888762 2478999999999999998876543321 11111 1136888875421
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
....+....+.|+|||.+++....
T Consensus 242 -------~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 242 -------SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp -------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred -------CHHHHHHHHHHhccCCEEEEeCCC
Confidence 145788999999999999987543
No 321
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.14 E-value=0.3 Score=49.16 Aligned_cols=91 Identities=16% Similarity=0.180 Sum_probs=61.1
Q ss_pred CceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeec---ccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFA---SKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d---~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
..+||-+|+|. |.++..+++.. ...|++++.+++.++.+++.|....+...+ ...+. +.||+|+-.-. .
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g-~- 267 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVA-A- 267 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCS-S-
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCC-C-
Confidence 37899999874 77777777652 246888999998888888877543332111 11221 47999986522 1
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
...+.+..+.|+|||.+++...
T Consensus 268 -----~~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 268 -----PHNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp -----CCCHHHHHTTEEEEEEEEECCC
T ss_pred -----HHHHHHHHHHhccCCEEEEecc
Confidence 1146778899999999987654
No 322
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=88.07 E-value=3 Score=41.62 Aligned_cols=103 Identities=9% Similarity=0.103 Sum_probs=64.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc---C-----------------------CCcEEEeec
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---G-----------------------LPAMIGSFA 307 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er---g-----------------------~~~~~~~~d 307 (474)
...|+.+|||.......|...+ ....+.-+|. ++.++.-++. . ....++.+|
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4789999999999999998642 1357778887 5555433221 1 234455555
Q ss_pred ccCCC--------C-CCCCeeEEEeccccccccccH-HHHHHHHHhhcCCCcEEEEEeCCCC
Q 011964 308 SKQLP--------Y-PSLSFDMLHCARCGVDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTN 359 (474)
Q Consensus 308 ~~~Lp--------f-~d~sFDlVvss~~l~~~~~d~-~~~L~ei~RvLKPGG~lvis~~~~~ 359 (474)
..+.. . ..+...++++..++..+.++. ..+++.+.... |+|.+++.++...
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 54421 1 334567778777766664433 36677777766 8888877776543
No 323
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.03 E-value=0.42 Score=47.85 Aligned_cols=93 Identities=14% Similarity=0.075 Sum_probs=62.8
Q ss_pred CceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~d~sFDlVvss~~ 326 (474)
..+||=+|+|. |..+..+++.. ...+++++.+++.++.+++.|....+. .+..++. .....||+|+-...
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~~g~g~D~vid~~g 266 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFALGADHGIN-RLEEDWVERVYALTGDRGADHILEIAG 266 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEEEEETT
T ss_pred CCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHHcCCCEEEc-CCcccHHHHHHHHhCCCCceEEEECCC
Confidence 37899999774 66777777652 247889999999999998888654332 1111110 12336999985522
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
...+.+..+.|+|||.+++....
T Consensus 267 --------~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 267 --------GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp --------SSCHHHHHHHEEEEEEEEEECCC
T ss_pred --------hHHHHHHHHHhhcCCEEEEEecC
Confidence 12567788999999999988643
No 324
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=87.62 E-value=0.9 Score=45.44 Aligned_cols=128 Identities=11% Similarity=0.034 Sum_probs=80.0
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC---CCCCCeeEEEeccccccc-
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP---YPSLSFDMLHCARCGVDW- 330 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp---f~d~sFDlVvss~~l~~~- 330 (474)
.+++|+-||.|.+...+.+.|+....+.++|+++..++.-+.+.....+...|+..+. ++...+|+++.+.-=-.+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 4799999999999999988876445688999999998887776544445556666654 233368999965220111
Q ss_pred -------cccHH-HHHHHHHhhcCCC--cEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEEe
Q 011964 331 -------DQKDG-ILLLEVDRVLKPG--GYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (474)
Q Consensus 331 -------~~d~~-~~L~ei~RvLKPG--G~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~~ 389 (474)
..+.. .++.++.|+++.= =.+++.+-+..-.. ...++.+....+.+++....
T Consensus 84 ~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~~~vlENV~gl~~-------~~~~~~i~~~l~~~GY~v~~ 145 (333)
T 4h0n_A 84 RNGKYLDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFEN-------STVRNLFIDKLKECNFIYQE 145 (333)
T ss_dssp ETTEECCTTCTTSCCHHHHHHHGGGCTTCCEEEEEECTTGGG-------SHHHHHHHHHHHHTTEEEEE
T ss_pred hhhhccCCcCcccccHHHHHHHHHHhcCCCEEEEecchhhhh-------hhHHHHHHHHHHhCCCeEEE
Confidence 12222 4566666655321 25566665544311 12355666677777776543
No 325
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=87.60 E-value=0.69 Score=45.48 Aligned_cols=92 Identities=14% Similarity=0.110 Sum_probs=61.4
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHH-HHcCCCcEEEeecccCCC-----CCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLT-LERGLPAMIGSFASKQLP-----YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A-~erg~~~~~~~~d~~~Lp-----f~d~sFDlVvss~ 325 (474)
..+||-+|+ |.|..+..+++.. ...+++++.+++.++.+ ++.+....+...+ .++. ...+.+|+|+.+-
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVEELGFDGAIDYKN-EDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCCSEEEETTT-SCHHHHHHHHCTTCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCCEEEECCC-HHHHHHHHHhcCCCceEEEECC
Confidence 378999998 5677777777652 24788899999888888 6666543322111 1100 1134699998652
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ...+....+.|++||.+++...
T Consensus 227 g--------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 227 G--------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp C--------HHHHHHHHTTEEEEEEEEECCC
T ss_pred C--------cchHHHHHHHHhhCCEEEEEee
Confidence 2 1378889999999999998653
No 326
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=87.47 E-value=0.71 Score=46.38 Aligned_cols=94 Identities=12% Similarity=0.037 Sum_probs=63.0
Q ss_pred CceEEEECCC-CchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeec-ccCC-----CCCCCCeeEEEecc
Q 011964 254 VRTILDIGCG-YGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFA-SKQL-----PYPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCG-tG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d-~~~L-----pf~d~sFDlVvss~ 325 (474)
..+||=+|+| .|.++..+++. |. ..|+++|.+++.++.+++.|....+...+ ..++ ...++.||+|+-.-
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGA--SRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTC--SCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 3689999987 37777777765 32 26888999999999998877654332111 0111 02234799998542
Q ss_pred ccccccccHHHHHHHHHhhcCCC-cEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPG-GYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPG-G~lvis~~ 356 (474)
. ....+.+..+.|++| |.+++...
T Consensus 272 g-------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 272 G-------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp C-------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred C-------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 1 134788999999997 99998764
No 327
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=87.45 E-value=0.91 Score=45.43 Aligned_cols=94 Identities=12% Similarity=-0.036 Sum_probs=61.8
Q ss_pred CceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc-cCC-----CCCCCCeeEEEecc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS-KQL-----PYPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~-~~L-----pf~d~sFDlVvss~ 325 (474)
..+||-+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|....+...+. .++ ...++.||+|+-.-
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga--~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 269 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGA--ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI 269 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--SEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECC
Confidence 37899999864 6677777765 32 268889999988899988776433321110 111 01224799998542
Q ss_pred ccccccccHHHHHHHHHhhcCCC-cEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPG-GYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPG-G~lvis~~ 356 (474)
. ....+.+..+.|++| |.+++...
T Consensus 270 g-------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 270 G-------RLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp C-------CHHHHHHHHHHBCTTTCEEEECSC
T ss_pred C-------CHHHHHHHHHHhhcCCcEEEEecc
Confidence 1 134788899999999 99988653
No 328
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=87.41 E-value=0.82 Score=45.04 Aligned_cols=92 Identities=14% Similarity=0.066 Sum_probs=60.3
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHH-HcCCCcEEEeecccCCC-----CCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTL-ERGLPAMIGSFASKQLP-----YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~-erg~~~~~~~~d~~~Lp-----f~d~sFDlVvss~ 325 (474)
..+||-+|+ |.|..+..+++.. ...+++++.+++.++.++ +.+....+...+..++. ...+.+|+|+.+.
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 233 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENV 233 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence 378999997 5677777776642 147888999998888887 45553322111101110 1124699998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
. ...+....+.|++||.+++..
T Consensus 234 g--------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 234 G--------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp C--------HHHHHHHHTTEEEEEEEEECC
T ss_pred C--------HHHHHHHHHHHhcCCEEEEEc
Confidence 2 137888999999999998864
No 329
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=87.35 E-value=0.77 Score=45.97 Aligned_cols=94 Identities=11% Similarity=-0.026 Sum_probs=61.9
Q ss_pred CceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc-cCC-----CCCCCCeeEEEecc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS-KQL-----PYPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~-~~L-----pf~d~sFDlVvss~ 325 (474)
..+||-+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|....+...+. .++ ....+.+|+|+-.-
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga--~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 270 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGA--KRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV 270 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--SEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC--CEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECC
Confidence 37899999864 6677777765 32 268889999999999988776433321110 011 01123699998542
Q ss_pred ccccccccHHHHHHHHHhhcCCC-cEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPG-GYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPG-G~lvis~~ 356 (474)
. ....+....+.|+|| |.+++...
T Consensus 271 g-------~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 271 G-------NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp C-------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred C-------CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 2 134788999999999 99988654
No 330
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=87.20 E-value=0.92 Score=45.39 Aligned_cols=94 Identities=13% Similarity=-0.032 Sum_probs=62.3
Q ss_pred CceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc-cCC-----CCCCCCeeEEEecc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS-KQL-----PYPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~-~~L-----pf~d~sFDlVvss~ 325 (474)
..+||-+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|....+...+. .++ ....+.||+|+-.-
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~ 269 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGA--SRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA 269 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC--CeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECC
Confidence 37899999864 6677777765 32 268889999988999988776433321110 111 01224799998542
Q ss_pred ccccccccHHHHHHHHHhhcCCC-cEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPG-GYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPG-G~lvis~~ 356 (474)
. ....+.+..+.|++| |.+++...
T Consensus 270 g-------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 270 G-------RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp C-------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred C-------CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 1 134788899999999 99988654
No 331
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=87.19 E-value=1.2 Score=48.58 Aligned_cols=100 Identities=17% Similarity=0.195 Sum_probs=59.5
Q ss_pred CceEEEECCCCchHHHHhhhc-----------CCceeEEEEecC---CHHHHHHHHHc--------------------C-
Q 011964 254 VRTILDIGCGYGSFGAHLFSK-----------ELLTMCIANYEA---SGSQVQLTLER--------------------G- 298 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~-----------g~~~~~v~giD~---s~~~l~~A~er--------------------g- 298 (474)
.-+|+|+|.|+|.+...+.+. .....+++.+|. +.+.+..+... +
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 358999999999988777553 112367888887 55555543321 0
Q ss_pred ---------CCcEEEeecccC-CC-CC---CCCeeEEEecccccccccc--HHHHHHHHHhhcCCCcEEEE
Q 011964 299 ---------LPAMIGSFASKQ-LP-YP---SLSFDMLHCARCGVDWDQK--DGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 299 ---------~~~~~~~~d~~~-Lp-f~---d~sFDlVvss~~l~~~~~d--~~~~L~ei~RvLKPGG~lvi 353 (474)
+...+..+|+.+ ++ +. ++.||+++.-...-...++ ...++..+.++++|||.+.-
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 112233344322 22 22 4689999874211111111 15799999999999998664
No 332
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.98 E-value=0.58 Score=46.37 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=61.3
Q ss_pred CceEEEECCC--CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----CCCC-CCeeEEEecc
Q 011964 254 VRTILDIGCG--YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----PYPS-LSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCG--tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----pf~d-~sFDlVvss~ 325 (474)
..+||-+|+| .|..+..+++.. ....++++|.+++.++.+++.+....+...+ .+. .... +.+|+|+.+.
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~ 248 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRAGADYVINASM-QDPLAEIRRITESKGVDAVIDLN 248 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHHTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEESC
T ss_pred CCEEEEECCCccHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCEEecCCC-ccHHHHHHHHhcCCCceEEEECC
Confidence 3789999998 555666666541 0246888999999888888776543332111 110 0112 4799998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ....+.+..++|+|||.+++...
T Consensus 249 g-------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 249 N-------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp C-------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred C-------CHHHHHHHHHHHhcCCEEEEECC
Confidence 2 13477888999999999988654
No 333
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=86.97 E-value=0.59 Score=46.17 Aligned_cols=92 Identities=18% Similarity=0.143 Sum_probs=59.7
Q ss_pred CceEEEECCC--CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CCCCCeeEEEecc
Q 011964 254 VRTILDIGCG--YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCG--tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~d~sFDlVvss~ 325 (474)
..+||-+|+| .|..+..+++.. ...+++++.+++.++.+++.+....+...+ .++. .....||+|+-+-
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~-~~~~~~~~~~~~~~g~Dvvid~~ 221 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRLGAAYVIDTST-APLYETVMELTNGIGADAAIDSI 221 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhCCCcEEEeCCc-ccHHHHHHHHhCCCCCcEEEECC
Confidence 4789999987 577777777651 247888888888888888877654332111 1110 1234799998652
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ...+.+..+.|+|||.+++...
T Consensus 222 g--------~~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 222 G--------GPDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp C--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred C--------ChhHHHHHHHhcCCCEEEEEee
Confidence 2 1123444589999999998764
No 334
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=86.84 E-value=2.1 Score=42.22 Aligned_cols=94 Identities=16% Similarity=0.131 Sum_probs=53.7
Q ss_pred EEEeecccC-CC-CCCCCeeEEEecccccc-------------ccccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhh
Q 011964 302 MIGSFASKQ-LP-YPSLSFDMLHCARCGVD-------------WDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN 366 (474)
Q Consensus 302 ~~~~~d~~~-Lp-f~d~sFDlVvss~~l~~-------------~~~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~ 366 (474)
.+..+|... +. +++++||+|++.--... +.......|.++.|+|||||.+++........+. +
T Consensus 16 ~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~-~- 93 (323)
T 1boo_A 16 SMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGV-P- 93 (323)
T ss_dssp EEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTE-E-
T ss_pred eEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCC-c-
Confidence 445555432 33 56789999998732110 1112457899999999999999987543200000 0
Q ss_pred HHHHHHHHHHHHHHHhhCceEEeeecceeEEeecC
Q 011964 367 KENQKRWNFVRDFVENLCWELVSQQDETVVWKKTS 401 (474)
Q Consensus 367 ~e~~~~w~~~~~la~~l~W~~~~~~~~~~iw~k~~ 401 (474)
......+..+.++.+..+|... ...||.|..
T Consensus 94 ~~~~~~~~~i~~~~~~~Gf~~~----~~iiW~k~~ 124 (323)
T 1boo_A 94 ARSIYNFRVLIRMIDEVGFFLA----EDFYWFNPS 124 (323)
T ss_dssp EECCHHHHHHHHHHHTTCCEEE----EEEEEECSS
T ss_pred ccccchHHHHHHHHHhCCCEEE----EEEEEecCC
Confidence 0001124444456677888654 256898765
No 335
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=86.73 E-value=0.49 Score=46.95 Aligned_cols=93 Identities=12% Similarity=0.063 Sum_probs=60.5
Q ss_pred CceEEEECC--CCchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC-----CCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP-----YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp-----f~d~sFDlVvss~ 325 (474)
..+||-+|+ |.|..+..++.. | ..+++++.+++.++.+++.+....+...+..++. ..++.+|+|+.+.
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~G---a~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMG---YRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC---CcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 378999998 467777776664 4 4678888888777888776654322111011110 1112699998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ....+.+..+.|++||.+++...
T Consensus 247 g-------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 247 V-------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp S-------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred C-------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 2 13478899999999999988654
No 336
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=86.70 E-value=0.98 Score=45.11 Aligned_cols=94 Identities=13% Similarity=-0.029 Sum_probs=61.9
Q ss_pred CceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc-cCC-----CCCCCCeeEEEecc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS-KQL-----PYPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~-~~L-----pf~d~sFDlVvss~ 325 (474)
..+||-+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|....+...+. .++ ...++.||+|+-.-
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga--~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~ 268 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGA--SRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECI 268 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECC
Confidence 36899999864 6666677665 32 268889999988899988776433321110 111 01124799998542
Q ss_pred ccccccccHHHHHHHHHhhcCCC-cEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPG-GYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPG-G~lvis~~ 356 (474)
. ....+.+..+.|+|| |.+++...
T Consensus 269 g-------~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 269 G-------NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp C-------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred C-------cHHHHHHHHHhhccCCcEEEEEec
Confidence 2 134788999999999 99998654
No 337
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=85.87 E-value=1.1 Score=44.32 Aligned_cols=94 Identities=15% Similarity=0.082 Sum_probs=64.7
Q ss_pred CceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC-----C-CCCCeeEEEeccc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP-----Y-PSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp-----f-~d~sFDlVvss~~ 326 (474)
..+||=+|+|. |.++..+++.- -...|+++|.+++.++.+++.|....+...+ ++. . ....+|+|+-.-.
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~--~~~~~v~~~t~g~g~d~v~d~~G 248 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALAREVGADAAVKSGA--GAADAIRELTGGQGATAVFDFVG 248 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHTTCSEEEECST--THHHHHHHHHGGGCEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC--cHHHHHHHHhCCCCCeEEEECCC
Confidence 37899999875 77777777651 1357899999999999999888654432111 110 1 1236999985421
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
....+.+..+.|++||.+++....
T Consensus 249 -------~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 249 -------AQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp -------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred -------CHHHHHHHHHHHhcCCEEEEECCC
Confidence 134788999999999999987643
No 338
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=85.52 E-value=1.4 Score=42.90 Aligned_cols=92 Identities=15% Similarity=0.083 Sum_probs=63.3
Q ss_pred eEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccC-CCCCCCCeeEEEeccccccccc
Q 011964 256 TILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ-LPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 256 ~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~-Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
+||=+|+ |.|.++..+++.. ...+++++.+++.++.+++.|....+...+... ..+..+.+|+|+-.-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g------ 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG------ 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC------
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC------
Confidence 4999987 5678888888762 247888999998899998887654443222111 1123457999875421
Q ss_pred cHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 333 KDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 333 d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
...+.+..+.|+|+|.+++....
T Consensus 221 --~~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 221 --DKVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp --HHHHHHHHHTEEEEEEEEECCCT
T ss_pred --cHHHHHHHHHHhcCCEEEEEecC
Confidence 23788999999999999987543
No 339
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=85.51 E-value=3.4 Score=40.89 Aligned_cols=93 Identities=9% Similarity=0.008 Sum_probs=60.7
Q ss_pred ceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeec---ccCCC------CCCCCeeEEEe
Q 011964 255 RTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFA---SKQLP------YPSLSFDMLHC 323 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d---~~~Lp------f~d~sFDlVvs 323 (474)
.+||=+|+|. |.++..+++. |. ..|+++|.+++.++.+++....+.....+ ..++. .....||+|+-
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAGA--CPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC--CSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 6888899865 7777777765 32 23788999999999998873222211111 01100 12347999985
Q ss_pred ccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 324 s~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.-. ....+....++|++||.+++...
T Consensus 259 ~~g-------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 259 CTG-------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CSC-------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred CCC-------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 421 13478889999999999998764
No 340
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=85.42 E-value=2.7 Score=41.31 Aligned_cols=90 Identities=10% Similarity=0.097 Sum_probs=61.1
Q ss_pred ceEEEECCC-CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCC------CCCeeEEEecccc
Q 011964 255 RTILDIGCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP------SLSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCG-tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~------d~sFDlVvss~~l 327 (474)
.+||-+|+| .|..+..+++.. ...+++++.+++.++.+++.+....+ +.....+. .+.+|+|+-...
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~~---d~~~~~~~~~~~~~~~~~d~vid~~g- 239 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELGADLVV---NPLKEDAAKFMKEKVGGVHAAVVTAV- 239 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEEE---CTTTSCHHHHHHHHHSSEEEEEESSC-
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHCCCCEEe---cCCCccHHHHHHHHhCCCCEEEECCC-
Confidence 789999986 477777776652 24788999999999998877654322 21111110 046999986522
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
....+.+..+.|++||.+++...
T Consensus 240 ------~~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 240 ------SKPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp ------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred ------CHHHHHHHHHHhhcCCEEEEecc
Confidence 13478888999999999988654
No 341
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.34 E-value=1.1 Score=44.97 Aligned_cols=95 Identities=13% Similarity=-0.009 Sum_probs=61.9
Q ss_pred CceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc-cCC-----CCCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS-KQL-----PYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~-~~L-----pf~d~sFDlVvss~~ 326 (474)
..+||-+|+|. |.++..+++... ...|+++|.+++.++.+++.|....+...+. .++ ....+.||+|+-.-.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 37899999863 667777776521 1268889999988999988776433321110 011 011236999985421
Q ss_pred cccccccHHHHHHHHHhhcCCC-cEEEEEeC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPG-GYFVWTSP 356 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPG-G~lvis~~ 356 (474)
....+.+..+.|++| |.+++...
T Consensus 275 -------~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 -------TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp -------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred -------CHHHHHHHHHHhhcCCCEEEEECC
Confidence 134788999999999 99988654
No 342
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=84.78 E-value=1.6 Score=43.38 Aligned_cols=123 Identities=16% Similarity=0.146 Sum_probs=71.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCC-CCCeeEEEeccccccc---
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP-SLSFDMLHCARCGVDW--- 330 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~-d~sFDlVvss~~l~~~--- 330 (474)
.+|+|+.||.|.++..+...|+ ..+.++|+++..++..+.+..... ..|+..+... -..+|+|+...---.+
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG~--~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~a 87 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCGA--ECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSIS 87 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC--EEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCTT
T ss_pred CcEEEECCCcCHHHHHHHHCCC--eEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcchh
Confidence 5899999999999999998886 567889999999887776632221 4555554311 1248999975210111
Q ss_pred -----cccHH-HHHHH---HHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceE
Q 011964 331 -----DQKDG-ILLLE---VDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWEL 387 (474)
Q Consensus 331 -----~~d~~-~~L~e---i~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~ 387 (474)
..+.. .++.+ +.+.++|- +++.+-+..-. .......+..+...++.+++..
T Consensus 88 g~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~gl~----~~~~~~~~~~i~~~l~~~GY~v 147 (327)
T 2c7p_A 88 GKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKNFA----SHDNGNTLEVVKNTMNELDYSF 147 (327)
T ss_dssp SCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGGGG----TGGGGHHHHHHHHHHHHTTBCC
T ss_pred cccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHHHH----hccccHHHHHHHHHHHhCCCEE
Confidence 12222 24343 44446885 34444332211 1112245666666667777653
No 343
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=84.62 E-value=3 Score=41.58 Aligned_cols=91 Identities=13% Similarity=0.161 Sum_probs=63.5
Q ss_pred CceEEEEC-CC-CchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeec-----ccCCCCCCCCeeEEEecc
Q 011964 254 VRTILDIG-CG-YGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFA-----SKQLPYPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIG-CG-tG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d-----~~~Lpf~d~sFDlVvss~ 325 (474)
..+||=+| +| .|.++..+++. +. ..|++++.+++.++.+++.|....+...+ ... ...+.+|+|+-..
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g--~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~--~~~~g~Dvvid~~ 247 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTD--LTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAA--LGLGAPAFVFSTT 247 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCC--SEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHT--TCSCCEEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHH--hcCCCceEEEECC
Confidence 46899998 44 58888888875 32 57899999999999998877543332110 111 2345799998542
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
. ....+.+..+.|+|||.+++..
T Consensus 248 g-------~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 248 H-------TDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp C-------HHHHHHHHHHHSCTTCEEEECS
T ss_pred C-------chhhHHHHHHHhcCCCEEEEEC
Confidence 1 2357889999999999999874
No 344
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=84.61 E-value=8.1 Score=37.59 Aligned_cols=124 Identities=13% Similarity=0.062 Sum_probs=75.2
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCC-CCCeeEEEecccccc-c--
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP-SLSFDMLHCARCGVD-W-- 330 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~-d~sFDlVvss~~l~~-~-- 330 (474)
.+|||+=||.|.+...|.+.|+ ..+.++|+++..++.-+.+. +..+...|+..+... -..+|+++...- |. +
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~--~~v~a~e~d~~a~~ty~~N~-~~~~~~~DI~~i~~~~~~~~D~l~ggpP-CQ~fS~ 76 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGF--RIICANEYDKSIWKTYESNH-SAKLIKGDISKISSDEFPKCDGIIGGPP-SQSWSE 76 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC--EEEEEEECCTTTHHHHHHHC-CSEEEESCGGGCCGGGSCCCSEEECCCC-GGGTEE
T ss_pred CeEEEeCcCccHHHHHHHHCCC--EEEEEEeCCHHHHHHHHHHC-CCCcccCChhhCCHhhCCcccEEEecCC-CCCcCC
Confidence 3699999999999999988886 45678999998877666553 445566677666421 125899986521 11 1
Q ss_pred ------cccHH-HHHHHHHh---hcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHHHhhCceEE
Q 011964 331 ------DQKDG-ILLLEVDR---VLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELV 388 (474)
Q Consensus 331 ------~~d~~-~~L~ei~R---vLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la~~l~W~~~ 388 (474)
..|.. .++.++.| .+||. +++.+-+..-. .......+..+...++.+++...
T Consensus 77 ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~----~~~~~~~~~~i~~~l~~~GY~v~ 138 (331)
T 3ubt_Y 77 GGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMM----AQRHNKAVQEFIQEFDNAGYDVH 138 (331)
T ss_dssp TTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGG----GCTTSHHHHHHHHHHHHHTEEEE
T ss_pred CCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeecccc----cccccchhhhhhhhhccCCcEEE
Confidence 12332 45555444 46885 44555444321 11122445566666677776643
No 345
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=84.48 E-value=2.1 Score=41.96 Aligned_cols=71 Identities=10% Similarity=-0.030 Sum_probs=52.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCC---C-CCCeeEEEec
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPY---P-SLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf---~-d~sFDlVvss 324 (474)
..+|+|+=||.|.++..+.+.|+....+.++|+++..++.-+.+.....+...|+..+.. + .+.+|+++..
T Consensus 16 ~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 468999999999999999888875444789999999887766654444555667766641 1 1369999975
No 346
>2jml_A DNA binding domain/transcriptional regulator; anti-repressor, MERR, carotenogenesis; HET: DNA; NMR {Myxococcus xanthus}
Probab=83.42 E-value=0.3 Score=38.39 Aligned_cols=31 Identities=10% Similarity=0.129 Sum_probs=25.8
Q ss_pred ccceechhhhhhHHHhhhhhc-cCCCCcCcccccc
Q 011964 96 HGYRRLQEQLVSDLWDIGEIS-LGSSRSKDLEFCS 129 (474)
Q Consensus 96 ~~yr~~~~~~~~~~~~~~~~~-~g~~~~~~~~~C~ 129 (474)
||||+|++.|+.+|..|..|. .-|. ++++..
T Consensus 40 ~g~R~Y~~~dl~~l~~I~~l~~~~G~---sl~ei~ 71 (81)
T 2jml_A 40 NNYRVYSREEVEAVRRVARLIQEEGL---SVSEAI 71 (81)
T ss_dssp SSSCEECHHHHHHHHHHHHHHHHTST---HHHHHH
T ss_pred CCeeecCHHHHHHHHHHHHHHHHCCC---CHHHHH
Confidence 899999999999999999998 6666 555443
No 347
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=83.37 E-value=1.4 Score=43.81 Aligned_cols=90 Identities=13% Similarity=0.184 Sum_probs=60.2
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC--------CCCCCeeEEEe
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP--------YPSLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp--------f~d~sFDlVvs 323 (474)
..+||-+|+ |.|..+..+++.. ...+++++.+++.++.+++.+....+ +..... .....+|+|+.
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~~~---d~~~~~~~~~~~~~~~~~~~D~vi~ 245 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNGAHEVF---NHREVNYIDKIKKYVGEKGIDIIIE 245 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEE---ETTSTTHHHHHHHHHCTTCEEEEEE
T ss_pred cCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHcCCCEEE---eCCCchHHHHHHHHcCCCCcEEEEE
Confidence 478999997 5566666666542 24688899999888888877654322 211111 12236999986
Q ss_pred ccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 324 s~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+.. ...+.+..++|+|||.+++...
T Consensus 246 ~~G--------~~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 246 MLA--------NVNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp SCH--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC--------hHHHHHHHHhccCCCEEEEEec
Confidence 532 1357788999999999998653
No 348
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=83.35 E-value=1.5 Score=43.32 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=61.1
Q ss_pred CceEEEECCCC-chHHHHhhhcCCcee-EEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----C-CCCCCeeEEEecc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSKELLTM-CIANYEASGSQVQLTLERGLPAMIGSFASKQL-----P-YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~g~~~~-~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----p-f~d~sFDlVvss~ 325 (474)
..+||-+|+|. |..+..+++.. .. .|++++.+++.++.+++.+....+. ....++ . .....+|+|+-.-
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~v~~~~~g~g~D~vid~~ 244 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKKVGADYVIN-PFEEDVVKEVMDITDGNGVDVFLEFS 244 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHHHTCSEEEC-TTTSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhCCCEEEC-CCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 36899999863 66666666642 23 6888999999999888877543321 111111 0 1123699998652
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ....+.+..+.|++||.+++...
T Consensus 245 g-------~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 245 G-------APKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp C-------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred C-------CHHHHHHHHHHHhcCCEEEEEcc
Confidence 2 13478889999999999988654
No 349
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=83.24 E-value=0.63 Score=45.37 Aligned_cols=86 Identities=14% Similarity=0.194 Sum_probs=57.6
Q ss_pred CceEEEECCC-CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 254 VRTILDIGCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 254 ~~~VLDIGCG-tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
..+||=+|+| .|.++..+++.. ...+++++ +++.++.+++.|....+ . |.+.+ .+.||+|+-.-.
T Consensus 143 g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~lGa~~v~-~-d~~~v---~~g~Dvv~d~~g------ 208 (315)
T 3goh_A 143 QREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAKRGVRHLY-R-EPSQV---TQKYFAIFDAVN------ 208 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHHHTEEEEE-S-SGGGC---CSCEEEEECC--------
T ss_pred CCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHHcCCCEEE-c-CHHHh---CCCccEEEECCC------
Confidence 4789999996 477777777652 24788888 88888888887754333 2 33333 567999985421
Q ss_pred cHHHHHHHHHhhcCCCcEEEEEe
Q 011964 333 KDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 333 d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
...+.+..+.|+|||.++...
T Consensus 209 --~~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 --SQNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -------TTGGGEEEEEEEEEEC
T ss_pred --chhHHHHHHHhcCCCEEEEEe
Confidence 112356789999999999874
No 350
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=83.06 E-value=1.4 Score=43.46 Aligned_cols=90 Identities=9% Similarity=0.025 Sum_probs=61.7
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC--------CCCCCeeEEEe
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP--------YPSLSFDMLHC 323 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp--------f~d~sFDlVvs 323 (474)
..+||-+|+ |.|..+..+++.. ...+++++.+++.++.+++.+....+ +..... .....+|+|+.
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~ga~~~~---d~~~~~~~~~~~~~~~~~~~d~vi~ 241 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKALGADETV---NYTHPDWPKEVRRLTGGKGADKVVD 241 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEEE---ETTSTTHHHHHHHHTTTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCEEE---cCCcccHHHHHHHHhCCCCceEEEE
Confidence 478999998 6788887777652 24788899999988888876654322 211111 12247999986
Q ss_pred ccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 324 s~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+.. ...+....+.|+++|.+++...
T Consensus 242 ~~g--------~~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 242 HTG--------ALYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp SSC--------SSSHHHHHHHEEEEEEEEESSC
T ss_pred CCC--------HHHHHHHHHhhccCCEEEEEec
Confidence 532 1256778899999999988654
No 351
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=82.92 E-value=0.42 Score=42.17 Aligned_cols=33 Identities=15% Similarity=0.025 Sum_probs=28.8
Q ss_pred cccceechhhhhhHHHhhhhhccCCCCcCccccccc
Q 011964 95 YHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCSE 130 (474)
Q Consensus 95 ~~~yr~~~~~~~~~~~~~~~~~~g~~~~~~~~~C~~ 130 (474)
-||||.|++.|+.+|..|..|..-|. ++++...
T Consensus 49 ~~g~R~Y~~~dl~~l~~I~~lr~~G~---sL~eIk~ 81 (148)
T 3gpv_A 49 EKGDRIFNEEALKYLEMILCLKNTGM---PIQKIKQ 81 (148)
T ss_dssp TTCCEEBCHHHHHHHHHHHHHHTTTC---CHHHHHH
T ss_pred CCCCeecCHHHHHHHHHHHHHHHcCC---CHHHHHH
Confidence 59999999999999999999988888 6666554
No 352
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=82.56 E-value=1.1 Score=43.83 Aligned_cols=92 Identities=14% Similarity=0.022 Sum_probs=62.0
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~d~sFDlVvss~ 325 (474)
..+||-+|+ |.|..+..+++.. ..++++++.+++.++.+++.+....+.. ...++. .....+|+|+-+-
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~-~~~~~~~~~~~~~~~~g~Dvvid~~ 217 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKALGAWETIDY-SHEDVAKRVLELTDGKKCPVVYDGV 217 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHTCSEEEET-TTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCCEEEeC-CCccHHHHHHHHhCCCCceEEEECC
Confidence 478999983 4677777777651 2478889999999999988775433321 111110 1234799998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. . ..+....+.|++||.+++...
T Consensus 218 g-----~---~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 218 G-----Q---DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp C-----G---GGHHHHHTTEEEEEEEEECCC
T ss_pred C-----h---HHHHHHHHHhcCCCEEEEEec
Confidence 2 1 267788899999999998764
No 353
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=82.54 E-value=3.2 Score=39.43 Aligned_cols=72 Identities=11% Similarity=0.085 Sum_probs=42.3
Q ss_pred CCCCCeeEEEecccccccc--------------ccHHHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHH
Q 011964 313 YPSLSFDMLHCARCGVDWD--------------QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRD 378 (474)
Q Consensus 313 f~d~sFDlVvss~~l~~~~--------------~d~~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~ 378 (474)
+++++||+|++.-- +... ......|.++.|+|+|||.+++... . .+ ...+..
T Consensus 19 l~~~~vdlI~~DPP-Y~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~---d------~~----~~~~~~ 84 (260)
T 1g60_A 19 VENKSVQLAVIDPP-YNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT---P------FN----CAFICQ 84 (260)
T ss_dssp SCTTCEEEEEECCC-CSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC---H------HH----HHHHHH
T ss_pred ccccccCEEEECCC-CCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC---c------HH----HHHHHH
Confidence 34567888887522 1110 1224678899999999999988641 0 00 112233
Q ss_pred HHHhhCceEEeeecceeEEeecCC
Q 011964 379 FVENLCWELVSQQDETVVWKKTSK 402 (474)
Q Consensus 379 la~~l~W~~~~~~~~~~iw~k~~~ 402 (474)
+....+|.... ..||.|...
T Consensus 85 ~~~~~gf~~~~----~iiW~K~~~ 104 (260)
T 1g60_A 85 YLVSKGMIFQN----WITWDKRDG 104 (260)
T ss_dssp HHHHTTCEEEE----EEEECCCCS
T ss_pred HHHhhccceeE----EEEEEecCC
Confidence 44556775433 568988753
No 354
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=82.24 E-value=1.6 Score=44.61 Aligned_cols=44 Identities=16% Similarity=0.058 Sum_probs=34.8
Q ss_pred CCceEEEECCCCchHHHHhh-hcCCceeEEEEecCCHHHHHHHHH
Q 011964 253 GVRTILDIGCGYGSFGAHLF-SKELLTMCIANYEASGSQVQLTLE 296 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La-~~g~~~~~v~giD~s~~~l~~A~e 296 (474)
...+|+|||++.|.++..++ ..+.....|+++|+++...+..++
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~ 270 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQN 270 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH
Confidence 45799999999999999887 443233689999999988876654
No 355
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=82.10 E-value=0.42 Score=42.11 Aligned_cols=32 Identities=16% Similarity=-0.054 Sum_probs=27.1
Q ss_pred cccceechhhhhhHHHhhhhhccCCCCcCcccccc
Q 011964 95 YHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCS 129 (474)
Q Consensus 95 ~~~yr~~~~~~~~~~~~~~~~~~g~~~~~~~~~C~ 129 (474)
-||||.|++.|+.+|..|..|..-|. ++++-.
T Consensus 37 ~~g~R~Y~~~dl~~l~~I~~lr~~G~---sl~~I~ 68 (146)
T 3hh0_A 37 EGGHRLYTKDDLYVLQQIQSFKHLGF---SLGEIQ 68 (146)
T ss_dssp TTSCEEBCHHHHHHHHHHHHHHHTTC---CHHHHH
T ss_pred CCCCEeeCHHHHHHHHHHHHHHHcCC---CHHHHH
Confidence 49999999999999999999987777 555544
No 356
>2vz4_A Tipal, HTH-type transcriptional activator TIPA; transcription, resistance, antibiotic; 2.90A {Streptomyces lividans}
Probab=81.40 E-value=0.47 Score=39.36 Aligned_cols=33 Identities=18% Similarity=0.024 Sum_probs=27.7
Q ss_pred cccceechhhhhhHHHhhhhhccCCCCcCccccccc
Q 011964 95 YHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCSE 130 (474)
Q Consensus 95 ~~~yr~~~~~~~~~~~~~~~~~~g~~~~~~~~~C~~ 130 (474)
-||||.|++.|+.++..|..|..-|. ++++-..
T Consensus 34 ~~g~R~Y~~~dl~~l~~I~~lr~~G~---sl~~I~~ 66 (108)
T 2vz4_A 34 HAGHRRYSDADLDRLQQILFYRELGF---PLDEVAA 66 (108)
T ss_dssp SSCCEEBCHHHHHHHHHHHHHHHTTC---CHHHHHH
T ss_pred CCCCeecCHHHHHHHHHHHHHHHCCC---CHHHHHH
Confidence 58999999999999999999987777 5555443
No 357
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=81.36 E-value=1.4 Score=43.32 Aligned_cols=92 Identities=14% Similarity=0.100 Sum_probs=61.4
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~d~sFDlVvss~ 325 (474)
..+||-+|+ |.|..+..+++.. ...+++++.+++.++.+++.+....+.. ...++. .....||+|+-+-
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~-~~~~~~~~~~~~~~~~g~D~vid~~ 225 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKEYGAEYLINA-SKEDILRQVLKFTNGKGVDASFDSV 225 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEET-TTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcEEEeC-CCchHHHHHHHHhCCCCceEEEECC
Confidence 478999994 4566777776652 2478889999999999888775433321 111110 1234699998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. . ..+....+.|+|||.+++...
T Consensus 226 g-----~---~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 226 G-----K---DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp G-----G---GGHHHHHHHEEEEEEEEECCC
T ss_pred C-----h---HHHHHHHHHhccCCEEEEEcC
Confidence 2 1 367788899999999998753
No 358
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=81.17 E-value=2.9 Score=41.65 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=62.5
Q ss_pred CceEEEEC--CCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----CCCCCCeeEEEeccc
Q 011964 254 VRTILDIG--CGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----PYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIG--CGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----pf~d~sFDlVvss~~ 326 (474)
..+||-+| .|.|..+..+++.. ...+++++.+++.++.+++.|....+. .+..++ ....+.+|+|+-+..
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~~g~D~vid~~g 240 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKSLGCDRPIN-YKTEPVGTVLKQEYPEGVDVVYESVG 240 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHCTTCEEEEEECSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCCcEEEe-cCChhHHHHHHHhcCCCCCEEEECCC
Confidence 37899999 46788888887652 246888999998888888877543332 111110 011246999986532
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
...+..+.+.|++||.+++...
T Consensus 241 --------~~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 241 --------GAMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp --------THHHHHHHHHEEEEEEEEECCC
T ss_pred --------HHHHHHHHHHHhcCCEEEEEeC
Confidence 1378889999999999988654
No 359
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=81.08 E-value=0.6 Score=46.57 Aligned_cols=94 Identities=18% Similarity=0.206 Sum_probs=59.7
Q ss_pred CceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC--CCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL--PYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L--pf~d~sFDlVvss~~l~~ 329 (474)
..+||-+|+|. |.++..+++. | ..|++++.+++.++.+++.|....+...+..++ ... +.||+|+-.....
T Consensus 180 g~~VlV~GaG~vG~~~~qlak~~G---a~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g~~- 254 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISKAMG---AETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCASSL- 254 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT---CEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCSCS-
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCCCC-
Confidence 37899999853 6666777664 4 368889988888888888775443321111010 011 4799998653210
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
....+.+..+.|+|||.+++...
T Consensus 255 ----~~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 255 ----TDIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ----TTCCTTTGGGGEEEEEEEEECCC
T ss_pred ----cHHHHHHHHHHhcCCCEEEEecC
Confidence 01245667889999999987653
No 360
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=80.84 E-value=2.2 Score=42.36 Aligned_cols=90 Identities=12% Similarity=0.058 Sum_probs=58.5
Q ss_pred ceEEEECCCC-chHH-HHhh-hc-CCceeEEEEecCCHH---HHHHHHHcCCCcEEEeecccCC----CCCCCCeeEEEe
Q 011964 255 RTILDIGCGY-GSFG-AHLF-SK-ELLTMCIANYEASGS---QVQLTLERGLPAMIGSFASKQL----PYPSLSFDMLHC 323 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~-~~La-~~-g~~~~~v~giD~s~~---~l~~A~erg~~~~~~~~d~~~L----pf~d~sFDlVvs 323 (474)
.+||=+|+|. |.++ ..++ +. |. ..|++++.+++ .++.+++.|.... .....++ .. .+.||+|+-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga--~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~-~gg~Dvvid 248 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGY--ENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDV-YEQMDFIYE 248 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCC--CEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHH-SCCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCC--cEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHh-CCCCCEEEE
Confidence 6899999853 6666 6777 54 32 23888888887 7888887775322 2111110 01 236999985
Q ss_pred ccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 324 s~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.-. . ...+.+..++|+|||.+++...
T Consensus 249 ~~g------~-~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 249 ATG------F-PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp CSC------C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC------C-hHHHHHHHHHHhcCCEEEEEeC
Confidence 421 1 3468889999999999998754
No 361
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=80.56 E-value=6.2 Score=38.54 Aligned_cols=101 Identities=10% Similarity=0.068 Sum_probs=69.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccC-CC---CCCCCeeEEEecccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQ-LP---YPSLSFDMLHCARCG 327 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~~~-Lp---f~d~sFDlVvss~~l 327 (474)
..+||+=+|+|.++..+.+.+ ..++.+|.++..++..+++- -.+.+...|... +. -+...||+|++--.
T Consensus 93 ~~~LDlfaGSGaLgiEaLS~~---d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP- 168 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLRSQ---DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS- 168 (283)
T ss_dssp SSSCCEEECHHHHHHHHSCTT---SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC-
T ss_pred CCceeEeCCcHHHHHHHcCCC---CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC-
Confidence 468999999999999998853 57888999999988777653 235566666322 21 22346999998643
Q ss_pred ccccccHHHHHHHHHh--hcCCCcEEEEEeCCCC
Q 011964 328 VDWDQKDGILLLEVDR--VLKPGGYFVWTSPLTN 359 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~R--vLKPGG~lvis~~~~~ 359 (474)
+....+.+.++..+.. .+.|+|.+++=-|...
T Consensus 169 Ye~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 169 YERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp CCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred CCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 3322344556665555 5679999998777644
No 362
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=80.39 E-value=1.8 Score=43.51 Aligned_cols=95 Identities=19% Similarity=0.219 Sum_probs=62.0
Q ss_pred CceEEEECCC-CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeec--ccC----C-C-CCCCCeeEEEec
Q 011964 254 VRTILDIGCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFA--SKQ----L-P-YPSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCG-tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d--~~~----L-p-f~d~sFDlVvss 324 (474)
..+||-+|+| .|.++..+++... ...|++++.+++.++.+++.|....+.... ..+ + . .....||+|+-.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 3789999966 4666777776521 147889999999999998877643332110 011 1 0 122369999854
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
-. . ...+.+..+.|+|||.+++...
T Consensus 275 ~g---~----~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 275 TG---D----SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp SS---C----TTHHHHHHHHEEEEEEEEECCC
T ss_pred CC---C----HHHHHHHHHHHhcCCEEEEEec
Confidence 22 0 1367888999999999998754
No 363
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.01 E-value=1.5 Score=42.77 Aligned_cols=91 Identities=12% Similarity=0.047 Sum_probs=59.5
Q ss_pred CceEEEECC--CCchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----C-CCCCCeeEEEec
Q 011964 254 VRTILDIGC--GYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----P-YPSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----p-f~d~sFDlVvss 324 (474)
..+||-+|+ |.|..+..++.. | ..+++++.+++.++.+++.+....+. ....+. . .....+|+|+.+
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G---~~V~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTAQKAQSALKAGAWQVIN-YREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHcCCCEEEE-CCCccHHHHHHHHhCCCCceEEEEC
Confidence 478999994 556666666654 4 47888899998888887766543321 111110 0 122369999865
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.. ...+....+.|++||.+++...
T Consensus 217 ~g--------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 217 VG--------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp SC--------GGGHHHHHHTEEEEEEEEECCC
T ss_pred Cc--------hHHHHHHHHHhcCCCEEEEEec
Confidence 32 2367888999999999988653
No 364
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=80.00 E-value=0.52 Score=41.32 Aligned_cols=34 Identities=9% Similarity=0.031 Sum_probs=28.9
Q ss_pred ccccceechhhhhhHHHhhhhhccCCCCcCccccccc
Q 011964 94 IYHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCSE 130 (474)
Q Consensus 94 ~~~~yr~~~~~~~~~~~~~~~~~~g~~~~~~~~~C~~ 130 (474)
.-||||.|++.|+.+|..|..|..-|. ++++...
T Consensus 34 ~~~g~R~Y~~~dl~~l~~I~~lr~~G~---sL~eIk~ 67 (142)
T 3gp4_A 34 NESGVRKFGAEDLRWILFTRQMRRAGL---SIEALID 67 (142)
T ss_dssp CTTSCBCBCHHHHHHHHHHHHHHHTTC---CHHHHHH
T ss_pred CCCCCeeeCHHHHHHHHHHHHHHHcCC---CHHHHHH
Confidence 369999999999999999999988888 6666543
No 365
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=79.98 E-value=4.5 Score=40.86 Aligned_cols=95 Identities=13% Similarity=0.122 Sum_probs=59.1
Q ss_pred CceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CCCCCeeEEEecc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~d~sFDlVvss~ 325 (474)
..+||=+|+|. |.++..+++. |. ..|+++|.+++-++.+++.|....+.. ...++. .....+|+|+-.-
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~~~~lGa~~vi~~-~~~~~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGA--SKVILSEPSEVRRNLAKELGADHVIDP-TKENFVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHTCSEEECT-TTSCHHHHHHHHTTTCCCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHcCCCEEEcC-CCCCHHHHHHHHhCCCCCCEEEECC
Confidence 46888899864 6666667665 32 378899999999999998885443321 111110 1233699998542
Q ss_pred ccccccccHHHHHHHHHhhc----CCCcEEEEEeCC
Q 011964 326 CGVDWDQKDGILLLEVDRVL----KPGGYFVWTSPL 357 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvL----KPGG~lvis~~~ 357 (474)
. .....+..+.+.| ++||.+++....
T Consensus 291 g------~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 291 G------VPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp S------CHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred C------CcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 1 1222444444444 999999987653
No 366
>1q06_A Transcriptional regulator CUER; MERR family transcriptional regulator, copper efflux regulator; 2.07A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q05_A 1q07_A
Probab=79.02 E-value=0.61 Score=40.43 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=27.7
Q ss_pred cccceechhhhhhHHHhhhhhccCCCCcCccccccc
Q 011964 95 YHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCSE 130 (474)
Q Consensus 95 ~~~yr~~~~~~~~~~~~~~~~~~g~~~~~~~~~C~~ 130 (474)
-||||.|++.|+.+|..|..|..-|. ++++-..
T Consensus 33 ~~g~R~Y~~~dl~~l~~I~~lr~~G~---sl~eI~~ 65 (135)
T 1q06_A 33 ENGYRTYTQQHLNELTLLRQARQVGF---NLEESGE 65 (135)
T ss_dssp TTSCEECCHHHHHHHHHHHHHHHTTC---CHHHHHH
T ss_pred CCCCeeeCHHHHHHHHHHHHHHHCCC---CHHHHHH
Confidence 68999999999999999999887777 5655443
No 367
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=78.74 E-value=1.6 Score=43.04 Aligned_cols=90 Identities=12% Similarity=0.108 Sum_probs=60.3
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~d~sFDlVvss~ 325 (474)
..+||=+|+ |.|..+..+++.. ...+++++.+++.++.+++.+....+. .. .++. .....+|+|+-.-
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~v~~-~~-~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSVGADIVLP-LE-EGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEE-SS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCcEEec-Cc-hhHHHHHHHHhCCCCceEEEECC
Confidence 478999997 4677777777652 247888898888888888877544332 11 1110 1233699998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
. . ..+....+.|++||.+++..
T Consensus 236 g-~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 236 G-G-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp C----------CHHHHHHTEEEEEEEEEC-
T ss_pred c-h-------hHHHHHHHhhcCCCEEEEEE
Confidence 2 1 25778889999999999865
No 368
>1r8d_A Transcription activator MTAN; protein-DNA complex, transcription/DNA complex; 2.70A {Bacillus subtilis} SCOP: a.6.1.3 PDB: 1jbg_A
Probab=78.65 E-value=0.66 Score=38.51 Aligned_cols=33 Identities=21% Similarity=0.084 Sum_probs=27.8
Q ss_pred cccceechhhhhhHHHhhhhhccCCCCcCccccccc
Q 011964 95 YHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCSE 130 (474)
Q Consensus 95 ~~~yr~~~~~~~~~~~~~~~~~~g~~~~~~~~~C~~ 130 (474)
-||||.|++.|+.++..|..|..-|. ++++...
T Consensus 35 ~~g~R~Y~~~dl~~l~~I~~l~~~G~---~l~~I~~ 67 (109)
T 1r8d_A 35 DAGYRLYSDADLERLQQILFFKEIGF---RLDEIKE 67 (109)
T ss_dssp TTCCEEBCHHHHHHHHHHHHHHHTTC---CHHHHHH
T ss_pred CCCCeeeCHHHHHHHHHHHHHHHCCC---CHHHHHH
Confidence 59999999999999999999887777 5665554
No 369
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=78.51 E-value=6.1 Score=38.62 Aligned_cols=95 Identities=14% Similarity=0.098 Sum_probs=60.3
Q ss_pred ceEEEECCCCc-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeeccc---CC-C-CCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYG-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASK---QL-P-YPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~---~L-p-f~d~sFDlVvss~~l~ 328 (474)
.+||=+|+|.+ .++..+++. .....|+++|.+++-++.+++.+....+...+.. .+ . .....+|.++....
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~-~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~-- 241 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKN-VFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAV-- 241 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCS--
T ss_pred CEEEEEcCCCccHHHHHHHHH-hCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEecc--
Confidence 68999999864 344444443 1236789999999999999988765544321110 00 0 12234666654311
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
....+....+.|++||.+++....
T Consensus 242 -----~~~~~~~~~~~l~~~G~~v~~g~~ 265 (348)
T 4eez_A 242 -----ARIAFEQAVASLKPMGKMVAVAVP 265 (348)
T ss_dssp -----CHHHHHHHHHTEEEEEEEEECCCC
T ss_pred -----CcchhheeheeecCCceEEEEecc
Confidence 145788899999999999887643
No 370
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=78.17 E-value=4.2 Score=40.07 Aligned_cols=91 Identities=15% Similarity=0.230 Sum_probs=60.3
Q ss_pred CceEEEEC-CC-CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----CCCCCCeeEEEeccc
Q 011964 254 VRTILDIG-CG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----PYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIG-CG-tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----pf~d~sFDlVvss~~ 326 (474)
..+||=+| +| .|.++..+++.. ...+++++.+++.++.+++.|....+.. . +++ ....+.||+|+-...
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~-~-~~~~~~~~~~~~~g~Dvv~d~~g 226 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKKMGADIVLNH-K-ESLLNQFKTQGIELVDYVFCTFN 226 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHHHTCSEEECT-T-SCHHHHHHHHTCCCEEEEEESSC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCcEEEEC-C-ccHHHHHHHhCCCCccEEEECCC
Confidence 36899884 43 566777777652 2478999999999999988775433321 1 110 012346999985421
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
....+....+.|++||.++...
T Consensus 227 -------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 227 -------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEESS
T ss_pred -------chHHHHHHHHHhccCCEEEEEC
Confidence 2457788999999999997653
No 371
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=77.96 E-value=29 Score=33.98 Aligned_cols=101 Identities=9% Similarity=0.009 Sum_probs=61.7
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc----C----CCcEEEeecccCCC---------CCCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G----LPAMIGSFASKQLP---------YPSL 316 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er----g----~~~~~~~~d~~~Lp---------f~d~ 316 (474)
.+.|++||||-=.....+... ....++-+| .+..++..++. + -...++.+|..+ . |...
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~--~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWP--TGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCC--TTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CCeEEEeCCCCCchhhhccCC--CCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 467999999998887777632 125677788 56666554432 1 123345556544 2 2222
Q ss_pred CeeEEEecccccccccc-HHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 317 SFDMLHCARCGVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 317 sFDlVvss~~l~~~~~d-~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
.-=++++..+++++.++ ...+++.+...+.||+++++.....
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 23345555554444332 2478888888888999998876543
No 372
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=77.94 E-value=1.6 Score=42.63 Aligned_cols=91 Identities=13% Similarity=0.147 Sum_probs=58.3
Q ss_pred eEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc--cC-CCCCCCCeeEEEeccccccc
Q 011964 256 TILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS--KQ-LPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 256 ~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~--~~-Lpf~d~sFDlVvss~~l~~~ 330 (474)
+||-+|+ |.|.++..+++.. ...+++++.+++.++.+++.|....+...+. +. .....+.+|+|+-.-.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g---- 225 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVG---- 225 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECST----
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCc----
Confidence 7999997 5677777777652 1357788888777888887775433321111 00 1122346999985422
Q ss_pred cccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 331 DQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 331 ~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ..+.+..+.|++||.+++...
T Consensus 226 -~---~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 226 -G---RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp -T---TTHHHHHHTEEEEEEEEECSC
T ss_pred -H---HHHHHHHHhhccCCEEEEEee
Confidence 1 157788899999999988653
No 373
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=77.88 E-value=11 Score=39.56 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=40.9
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQL 311 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg---~~~~~~~~d~~~L 311 (474)
.-+++|+=||.|.++..+.+.|+ ..+.++|+++..++.-+.+. ....+...|+..+
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~--~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGG--QCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTE--EEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHCCC--EEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhh
Confidence 46899999999999999988875 45789999998887766553 2333444454433
No 374
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=77.85 E-value=1.9 Score=42.14 Aligned_cols=90 Identities=12% Similarity=0.123 Sum_probs=59.3
Q ss_pred eEEEECC--CCchHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc--cCC-CCCCCCeeEEEecccccc
Q 011964 256 TILDIGC--GYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS--KQL-PYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 256 ~VLDIGC--GtG~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~--~~L-pf~d~sFDlVvss~~l~~ 329 (474)
+||=+|+ |.|..+..+++. | ..+++++.+++.++.+++.|....+...+. +.+ ....+.+|+|+-.-.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g--- 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG--- 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC---
T ss_pred eEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc---
Confidence 7999997 567777777765 4 357778887777788887775443321111 111 123346999985422
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ..+.+..+.|++||.+++...
T Consensus 227 ---~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 227 ---G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp ---T--HHHHHHHTTEEEEEEEEECCC
T ss_pred ---H--HHHHHHHHhhcCCCEEEEEec
Confidence 1 268888999999999998654
No 375
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=77.62 E-value=1.2 Score=42.98 Aligned_cols=88 Identities=14% Similarity=0.102 Sum_probs=58.7
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeec----ccCCCCCCCCeeEEEecccc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFA----SKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d----~~~Lpf~d~sFDlVvss~~l 327 (474)
..+||-+|+ |.|..+..+++.. ...+++++.+++.++.+++.+....+...+ .+.+ +.+|+|+. ..
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~----~~~d~vid-~g- 197 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW----GGLDLVLE-VR- 197 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT----TSEEEEEE-CS-
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh----cCceEEEE-CC-
Confidence 378999997 4677777777652 247888899888888887766543322111 0112 46999986 32
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ..+....+.|++||.++....
T Consensus 198 ~-------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 198 G-------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp C-------TTHHHHHTTEEEEEEEEEC--
T ss_pred H-------HHHHHHHHhhccCCEEEEEeC
Confidence 1 257788899999999987643
No 376
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=76.93 E-value=2.5 Score=41.96 Aligned_cols=92 Identities=13% Similarity=0.074 Sum_probs=59.5
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----C-CCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----P-YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----p-f~d~sFDlVvss~ 325 (474)
..+||-+|+ |.|..+..++... ...+++++.+++.++.+++.+....+. ....+. . .....+|+|+.+.
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~~ 239 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEKLGAAAGFN-YKKEDFSEATLKFTKGAGVNLILDCI 239 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCcEEEe-cCChHHHHHHHHHhcCCCceEEEECC
Confidence 478999984 5666666666542 247888999998888887766543321 111110 0 1224699998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.. ..+.+..++|++||.+++...
T Consensus 240 G~--------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 240 GG--------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp CG--------GGHHHHHHHEEEEEEEEECCC
T ss_pred Cc--------hHHHHHHHhccCCCEEEEEec
Confidence 21 146778899999999998764
No 377
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=74.67 E-value=3.5 Score=40.27 Aligned_cols=92 Identities=11% Similarity=0.066 Sum_probs=60.4
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~d~sFDlVvss~ 325 (474)
..+||-+|+ |.|..+..++... ...+++++.+++.++.+++.+....+. ....+.. .....+|+|+.+.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~g~~~~~d-~~~~~~~~~i~~~~~~~~~d~vi~~~ 222 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARKLGCHHTIN-YSTQDFAEVVREITGGKGVDVVYDSI 222 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCCEEEE-CCCHHHHHHHHHHhCCCCCeEEEECC
Confidence 478999995 6777777776642 247888999998888887766543221 1111100 1123699998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.. ..+....+.|++||.+++...
T Consensus 223 g~--------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 223 GK--------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp CT--------TTHHHHHHTEEEEEEEEECCC
T ss_pred cH--------HHHHHHHHhhccCCEEEEEec
Confidence 21 357788899999999988653
No 378
>2zhg_A Redox-sensitive transcriptional activator SOXR; oxidative stress, MERR family, activator; HET: DNA; 2.80A {Escherichia coli} PDB: 2zhh_A
Probab=74.47 E-value=0.77 Score=40.77 Aligned_cols=34 Identities=15% Similarity=-0.043 Sum_probs=28.0
Q ss_pred ccccceechhhhhhHHHhhhhhccCCCCcCccccccc
Q 011964 94 IYHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCSE 130 (474)
Q Consensus 94 ~~~~yr~~~~~~~~~~~~~~~~~~g~~~~~~~~~C~~ 130 (474)
.-||||.|++.|+.+|..|..|..-|. ++++-..
T Consensus 42 ~~~g~R~Y~~~dl~~l~~I~~lr~~G~---sl~eI~~ 75 (154)
T 2zhg_A 42 NSGNQRRYKRDVLRYVAIIKIAQRIGI---PLATIGE 75 (154)
T ss_dssp CTTSCEEBCTTHHHHHHHHHHHHHHTC---CHHHHHH
T ss_pred CCCCCEEeCHHHHHHHHHHHHHHHCCC---CHHHHHH
Confidence 469999999999999999999887777 6665543
No 379
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=73.72 E-value=7.3 Score=37.46 Aligned_cols=101 Identities=12% Similarity=0.133 Sum_probs=62.4
Q ss_pred CceEEEECCCCchHHHHhhhc------CCceeEEEEec-----CCH----------------------HHHHHHH---Hc
Q 011964 254 VRTILDIGCGYGSFGAHLFSK------ELLTMCIANYE-----ASG----------------------SQVQLTL---ER 297 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~------g~~~~~v~giD-----~s~----------------------~~l~~A~---er 297 (474)
++.|+|+|+-.|..+..++.. ......+.+.| +.. +.++... ++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 468999999999988876542 11234666666 210 1122111 11
Q ss_pred ----C---CCcEEEeecccC-CC-----CCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 298 ----G---LPAMIGSFASKQ-LP-----YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 298 ----g---~~~~~~~~d~~~-Lp-----f~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
+ -++.+..+++.+ +| .+..+||+|+.-.- .-......+..+...|+|||++++-+..
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D---~Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD---LYEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC---CHHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc---ccchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 2 235666665443 22 34567999997632 2133356899999999999999998863
No 380
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=73.61 E-value=5.1 Score=39.45 Aligned_cols=41 Identities=17% Similarity=0.065 Sum_probs=36.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHc
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER 297 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~er 297 (474)
...|||.-||+|..+....+.| ...+++|+++..++.+++|
T Consensus 253 ~~~VlDpF~GsGtt~~aa~~~g---r~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 253 DDLVVDIFGGSNTTGLVAERES---RKWISFEMKPEYVAASAFR 293 (323)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHGG
T ss_pred CCEEEECCCCCCHHHHHHHHcC---CCEEEEeCCHHHHHHHHHH
Confidence 3789999999999998887776 4788999999999999887
No 381
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=73.58 E-value=8.4 Score=38.95 Aligned_cols=93 Identities=19% Similarity=0.202 Sum_probs=59.7
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccc-cc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-QK 333 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~-~d 333 (474)
.+||.++-+.|.++..+... ..++.+.-|....+..+.++...... .....+...||+|+.-.- -+-. ..
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~d~v~~~~P-k~k~~~~ 117 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGR----MAVERLETSRAAFRCLTASGLQARLA----LPWEAAAGAYDLVVLALP-AGRGTAY 117 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTT----BEEEEEECBHHHHHHHHHTTCCCEEC----CGGGSCTTCEEEEEEECC-GGGCHHH
T ss_pred CcEEEecCCCCccccccCCC----CceEEEeCcHHHHHHHHHcCCCcccc----CCccCCcCCCCEEEEECC-cchhHHH
Confidence 58999999999877777533 24455555655555566677766331 112223467999984311 0000 12
Q ss_pred HHHHHHHHHhhcCCCcEEEEEeC
Q 011964 334 DGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 334 ~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.+..|.++.+.|+|||.+++...
T Consensus 118 ~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 118 VQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEEEc
Confidence 35788899999999999998874
No 382
>2dg6_A Putative transcriptional regulator; winged-helix motif, MERR family, gene regulation; 2.20A {Streptomyces coelicolor}
Probab=73.50 E-value=0.87 Score=43.04 Aligned_cols=34 Identities=9% Similarity=0.012 Sum_probs=22.7
Q ss_pred ccccceechhhhhhHHHhhhhhccC-CCCcCccccccc
Q 011964 94 IYHGYRRLQEQLVSDLWDIGEISLG-SSRSKDLEFCSE 130 (474)
Q Consensus 94 ~~~~yr~~~~~~~~~~~~~~~~~~g-~~~~~~~~~C~~ 130 (474)
.-||||.|++.++.+|..|+.|+.- |. ++++...
T Consensus 32 ~~~gyR~Y~~~dl~~L~~I~~lr~~~G~---sL~eIk~ 66 (222)
T 2dg6_A 32 VNATTAEYDEDHLRRLRLVRALIQVGKV---PVATARE 66 (222)
T ss_dssp -------CCHHHHHHHHHHHHHHHTTCC---CHHHHHH
T ss_pred CCCCceeeCHHHHHHHHHHHHHHHcCCC---CHHHHHH
Confidence 3689999999999999999999876 88 6666554
No 383
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=72.25 E-value=2.8 Score=41.23 Aligned_cols=92 Identities=13% Similarity=0.052 Sum_probs=57.7
Q ss_pred CceEEEECCCC-chHHHHhhhcCCcee-EEEEecCCHHHHHHHHHcCCCcEEEeecccCCC-----CCCCCeeEEEeccc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSKELLTM-CIANYEASGSQVQLTLERGLPAMIGSFASKQLP-----YPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~g~~~~-~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp-----f~d~sFDlVvss~~ 326 (474)
..+||-+|+|. |..+..+++.. .. .|++++.+++.++.+++. . ..+......++. ...+.||+|+-...
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a-~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-A-DRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-C-SEEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-H-HhccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 36899999853 66666666642 23 688899998887777653 2 222211111100 01236999985522
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ...+.+..+.|++||.+++...
T Consensus 241 ------~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 241 ------N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp ------C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred ------C-HHHHHHHHHHHhcCCEEEEEec
Confidence 1 3468889999999999988654
No 384
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=71.98 E-value=5 Score=39.61 Aligned_cols=91 Identities=12% Similarity=0.105 Sum_probs=58.3
Q ss_pred ceEEEECC--CCchHHHHhhhcCCcee-EEEEecCCHHHHHHHHH-cCCCcEEEeecccCC-----CCCCCCeeEEEecc
Q 011964 255 RTILDIGC--GYGSFGAHLFSKELLTM-CIANYEASGSQVQLTLE-RGLPAMIGSFASKQL-----PYPSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGC--GtG~~~~~La~~g~~~~-~v~giD~s~~~l~~A~e-rg~~~~~~~~d~~~L-----pf~d~sFDlVvss~ 325 (474)
.+||-+|+ |.|..+..++... .. .+++++.+++.++.+++ .+....+ .....+. ....+.+|+|+.+-
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSELGFDAAI-NYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCCSEEE-ETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcCCceEE-ecCchHHHHHHHHhcCCCCCEEEECC
Confidence 68999997 4566666666541 24 78888999888887776 5543222 1111110 01112699998653
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ...+.+..++|++||.+++...
T Consensus 239 G--------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 239 G--------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp C--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred C--------HHHHHHHHHHhccCcEEEEECC
Confidence 2 2478889999999999988653
No 385
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=71.12 E-value=11 Score=36.72 Aligned_cols=95 Identities=12% Similarity=0.075 Sum_probs=61.4
Q ss_pred CceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CCCCCeeEEEecc
Q 011964 254 VRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~d~sFDlVvss~ 325 (474)
..+||=+|+|. |.++..+++. |. ..++.+|.+++-++.+++.|....+...+ ...+ -....+|+|+-.-
T Consensus 161 g~~VlV~GaG~vG~~aiq~ak~~G~--~~vi~~~~~~~k~~~a~~lGa~~~i~~~~-~~~~~~~~~~~~~~g~d~v~d~~ 237 (346)
T 4a2c_A 161 NKNVIIIGAGTIGLLAIQCAVALGA--KSVTAIDISSEKLALAKSFGAMQTFNSSE-MSAPQMQSVLRELRFNQLILETA 237 (346)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTTCSEEEETTT-SCHHHHHHHHGGGCSSEEEEECS
T ss_pred CCEEEEECCCCcchHHHHHHHHcCC--cEEEEEechHHHHHHHHHcCCeEEEeCCC-CCHHHHHHhhcccCCcccccccc
Confidence 37899899874 4455555554 32 45678899999999999988654442111 1100 1224578877542
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
. ....+....++|++||.+++.....
T Consensus 238 G-------~~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 238 G-------VPQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp C-------SHHHHHHHHHHCCTTCEEEECCCCS
T ss_pred c-------ccchhhhhhheecCCeEEEEEeccC
Confidence 1 1347888899999999999876543
No 386
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=70.81 E-value=1.3 Score=44.10 Aligned_cols=92 Identities=15% Similarity=0.098 Sum_probs=55.9
Q ss_pred ceEEEECCC-CchHHHHhhhcCCceeEEEEecCCHHHHHHHH-HcCCCcEEEeecccCC-CCCCCCeeEEEecccccccc
Q 011964 255 RTILDIGCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTL-ERGLPAMIGSFASKQL-PYPSLSFDMLHCARCGVDWD 331 (474)
Q Consensus 255 ~~VLDIGCG-tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~-erg~~~~~~~~d~~~L-pf~d~sFDlVvss~~l~~~~ 331 (474)
.+||=+|+| .|.++..+++.. ...+++++.+++.++.++ +.|....+...+.+.+ ... +.||+|+-.-. ..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~-~g~D~vid~~g-~~-- 255 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELA-DSLDYVIDTVP-VH-- 255 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHST-TTEEEEEECCC-SC--
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhc-CCCCEEEECCC-Ch--
Confidence 688999976 355666666541 246888898888888777 5564433321110000 011 36999985422 11
Q ss_pred ccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 332 QKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 332 ~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
..+....++|+|||.+++...
T Consensus 256 ----~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 256 ----HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ----CCSHHHHTTEEEEEEEEECSC
T ss_pred ----HHHHHHHHHhccCCEEEEeCC
Confidence 135567789999999988653
No 387
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=70.35 E-value=11 Score=38.73 Aligned_cols=92 Identities=15% Similarity=0.097 Sum_probs=61.4
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC-------------------
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------------------- 312 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------------------- 312 (474)
..+||=+|+ |.|.++..+++.. ...+++++.+++-++.+++.|....+...+ .+..
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~-~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRAMGAEAIIDRNA-EGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCCEEEETTT-TTCCSEEETTEECHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCcEEEecCc-CcccccccccccchHHHHHHHHH
Confidence 478999997 4677777777652 246677778999999998877654332111 1110
Q ss_pred ----CCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 313 ----YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 313 ----f~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.....+|+|+-.-. ...+....++|++||.+++...
T Consensus 306 i~~~t~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPG--------RETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHTSCCEEEEEECSC--------HHHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHhCCCCCcEEEEcCC--------chhHHHHHHHhhCCcEEEEEec
Confidence 11247999985422 2478888999999999998654
No 388
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=70.19 E-value=4.1 Score=40.16 Aligned_cols=89 Identities=21% Similarity=0.177 Sum_probs=59.3
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC------CCCCCeeEEEecc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------f~d~sFDlVvss~ 325 (474)
..+||-+|+ |.|..+..+++.. ...++++ .+++.++.+++.|... +. ...++. .....||+|+-.-
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~lGa~~-i~--~~~~~~~~~~~~~~~~g~D~vid~~ 224 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRDLGATP-ID--ASREPEDYAAEHTAGQGFDLVYDTL 224 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHHHTSEE-EE--TTSCHHHHHHHHHTTSCEEEEEESS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHHcCCCE-ec--cCCCHHHHHHHHhcCCCceEEEECC
Confidence 478999994 4577777777652 2367777 7888888888877544 22 211110 1234699998542
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ...+....+.|++||.+++...
T Consensus 225 g--------~~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 225 G--------GPVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp C--------THHHHHHHHHEEEEEEEEESCC
T ss_pred C--------cHHHHHHHHHHhcCCeEEEEcc
Confidence 2 1378888899999999997643
No 389
>3qao_A LMO0526 protein, MERR-like transcriptional regulator; structural genomics, the center for structural genomics of I diseases, csgid; 1.87A {Listeria monocytogenes}
Probab=69.55 E-value=1.4 Score=42.14 Aligned_cols=34 Identities=24% Similarity=0.153 Sum_probs=28.6
Q ss_pred ccccceechhhhhhHHHhhhhhccCCCCcCccccccc
Q 011964 94 IYHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCSE 130 (474)
Q Consensus 94 ~~~~yr~~~~~~~~~~~~~~~~~~g~~~~~~~~~C~~ 130 (474)
.-||||.|+++|+.+|..|..|..-|. ++++-..
T Consensus 35 ~~~GyR~Y~~~dl~~L~~I~~lr~~G~---sL~eIk~ 68 (249)
T 3qao_A 35 DWNGYRIYSEKDVDKLQQILFFKELDF---PLKKIQQ 68 (249)
T ss_dssp TTTCCEEBCHHHHHHHHHHHHHHHTTC---CHHHHHH
T ss_pred CCCCCeeeCHHHHHHHHHHHHHHHCCC---CHHHHHH
Confidence 369999999999999999999987788 6666554
No 390
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=68.95 E-value=3.3 Score=41.06 Aligned_cols=92 Identities=13% Similarity=0.034 Sum_probs=60.7
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC-----CCCCCeeEEEeccc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP-----YPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp-----f~d~sFDlVvss~~ 326 (474)
..+||-+|+ |.|..+..+++.. ...+++++.+++.++.+++.+....+.. ...++. ...+.+|+|+.+..
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~-~~~~~~~~~~~~~~~g~Dvvid~~g 244 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACERLGAKRGINY-RSEDFAAVIKAETGQGVDIILDMIG 244 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEEEET-TTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCCEEEeC-CchHHHHHHHHHhCCCceEEEECCC
Confidence 478999853 4577777777652 2478899999999999988775443321 111100 01346999986532
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
. ..+....+.|++||.+++...
T Consensus 245 -----~---~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 245 -----A---AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp -----G---GGHHHHHHTEEEEEEEEECCC
T ss_pred -----H---HHHHHHHHHhccCCEEEEEEe
Confidence 1 156778899999999998754
No 391
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=67.65 E-value=1.6 Score=41.73 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=29.4
Q ss_pred ccccceechhhhhhHHHhhhhhccCCCCcCccccccc
Q 011964 94 IYHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCSE 130 (474)
Q Consensus 94 ~~~~yr~~~~~~~~~~~~~~~~~~g~~~~~~~~~C~~ 130 (474)
..||||.|++.++.+|..|..|..-|. ++++-..
T Consensus 38 ~~~g~R~y~~~~~~~l~~i~~l~~~g~---~l~~i~~ 71 (278)
T 1r8e_A 38 PDTSYRYYTDSQLIHLDLIKSLKYIGT---PLEEMKK 71 (278)
T ss_dssp TTTCCEEEETGGGGHHHHHHHHHHTTC---CHHHHHH
T ss_pred CCCCccccCHHHHHHHHHHHHHHHCCC---CHHHHHH
Confidence 369999999999999999999988788 6776665
No 392
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=67.63 E-value=7.2 Score=39.80 Aligned_cols=92 Identities=14% Similarity=0.080 Sum_probs=60.9
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC-------------------
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------------------- 312 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp------------------- 312 (474)
..+||=+|+ |.|..+..+++.. ...++.++.+++.++.+++.|....+...+ .++.
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRALGCDLVINRAE-LGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCCCEEEHHH-HTCCTTGGGCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCCEEEeccc-ccccccccccccccchhhhHHHH
Confidence 478999997 4566777777652 246677788999999998877654432211 1110
Q ss_pred ----CCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 313 ----YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 313 ----f~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.....+|+|+-.-. ...+....+.|++||.+++...
T Consensus 298 ~v~~~~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 298 LVVEKAGREPDIVFEHTG--------RVTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHSSCCSEEEECSC--------HHHHHHHHHHSCTTCEEEESCC
T ss_pred HHHHHhCCCceEEEECCC--------chHHHHHHHHHhcCCEEEEEec
Confidence 01246999986422 1367888899999999998754
No 393
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=67.29 E-value=1.8 Score=43.29 Aligned_cols=92 Identities=18% Similarity=0.147 Sum_probs=54.8
Q ss_pred ceEEEECCCC-chHHHHhhhcCCceeEEEEecCCHHHHHHHH-HcCCCcEEEeecccCCC-CCCCCeeEEEecccccccc
Q 011964 255 RTILDIGCGY-GSFGAHLFSKELLTMCIANYEASGSQVQLTL-ERGLPAMIGSFASKQLP-YPSLSFDMLHCARCGVDWD 331 (474)
Q Consensus 255 ~~VLDIGCGt-G~~~~~La~~g~~~~~v~giD~s~~~l~~A~-erg~~~~~~~~d~~~Lp-f~d~sFDlVvss~~l~~~~ 331 (474)
.+||=+|+|. |.++..+++.. ...+++++.+++.++.++ +.|....+...+.+.+. .. +.+|+|+-.-..-
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~-~~~D~vid~~g~~--- 262 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAA-GTLDGIIDTVSAV--- 262 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTT-TCEEEEEECCSSC---
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhh-CCCCEEEECCCcH---
Confidence 6888899753 55666666542 246888898888777776 44543322111100110 11 3699998653211
Q ss_pred ccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 332 QKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 332 ~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
..+.+..+.|++||.++....
T Consensus 263 ----~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 263 ----HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ----CCSHHHHHHEEEEEEEEECCC
T ss_pred ----HHHHHHHHHHhcCCEEEEEcc
Confidence 134566788999999988654
No 394
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=67.06 E-value=7.7 Score=38.43 Aligned_cols=88 Identities=16% Similarity=0.072 Sum_probs=56.9
Q ss_pred CceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCH---HHHHHHHHcCCCcEEEeecccCCCCC------CCCeeEEE
Q 011964 254 VRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASG---SQVQLTLERGLPAMIGSFASKQLPYP------SLSFDMLH 322 (474)
Q Consensus 254 ~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~---~~l~~A~erg~~~~~~~~d~~~Lpf~------d~sFDlVv 322 (474)
..+||-+|+|. |..+..+++. | ..|++++.++ +.++.+++.+.... + .. .+. .+.+|+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~~~~~~~~~~~~~~~ga~~v----~-~~-~~~~~~~~~~~~~d~vi 251 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG---LEVWMANRREPTEVEQTVIEETKTNYY----N-SS-NGYDKLKDSVGKFDVII 251 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT---CEEEEEESSCCCHHHHHHHHHHTCEEE----E-CT-TCSHHHHHHHCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeCCccchHHHHHHHHhCCcee----c-hH-HHHHHHHHhCCCCCEEE
Confidence 47899999842 4455555543 4 3788888887 77788877664322 2 22 221 14699998
Q ss_pred eccccccccccHHHHH-HHHHhhcCCCcEEEEEeCC
Q 011964 323 CARCGVDWDQKDGILL-LEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 323 ss~~l~~~~~d~~~~L-~ei~RvLKPGG~lvis~~~ 357 (474)
..-. . ...+ .+..+.|++||.+++....
T Consensus 252 d~~g-~------~~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 252 DATG-A------DVNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp ECCC-C------CTHHHHHHGGGEEEEEEEEECSCC
T ss_pred ECCC-C------hHHHHHHHHHHHhcCCEEEEEecC
Confidence 6532 1 1256 8889999999999987643
No 395
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=67.00 E-value=9.4 Score=36.99 Aligned_cols=89 Identities=17% Similarity=0.115 Sum_probs=55.2
Q ss_pred ceEEEEC-CC-CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccC-CCCCCCCeeEEEecccccccc
Q 011964 255 RTILDIG-CG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ-LPYPSLSFDMLHCARCGVDWD 331 (474)
Q Consensus 255 ~~VLDIG-CG-tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~-Lpf~d~sFDlVvss~~l~~~~ 331 (474)
.+||=+| +| .|.++..+++.. ...+++++ ++...+.+++.|....+...+ .+ +.-.-..+|+|+-.-.
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~g~D~v~d~~g----- 224 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLKALGAEQCINYHE-EDFLLAISTPVDAVIDLVG----- 224 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHHHHTCSEEEETTT-SCHHHHCCSCEEEEEESSC-----
T ss_pred CEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHHHcCCCEEEeCCC-cchhhhhccCCCEEEECCC-----
Confidence 7899886 44 577777777652 23566666 455588888877654332111 11 1000146999985422
Q ss_pred ccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 332 QKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 332 ~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
...+.+..+.|++||.++...
T Consensus 225 ---~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 225 ---GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp ---HHHHHHHGGGEEEEEEEEECC
T ss_pred ---cHHHHHHHHhccCCCEEEEeC
Confidence 123488899999999999864
No 396
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=66.58 E-value=3.9 Score=35.63 Aligned_cols=43 Identities=14% Similarity=0.163 Sum_probs=31.2
Q ss_pred CCCCCCCeeEEEeccccc-cccccHHHHHHHHHhhcCCCcEEEE
Q 011964 311 LPYPSLSFDMLHCARCGV-DWDQKDGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 311 Lpf~d~sFDlVvss~~l~-~~~~d~~~~L~ei~RvLKPGG~lvi 353 (474)
..+++++||.|+-..-.- ....-+..++..+.+.|||||.|..
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 457889999998642211 1112236899999999999999987
No 397
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=64.89 E-value=7.9 Score=38.17 Aligned_cols=42 Identities=19% Similarity=0.023 Sum_probs=36.3
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCH---HHHHHHHHcC
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASG---SQVQLTLERG 298 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~---~~l~~A~erg 298 (474)
...|||.-||+|..+....+.| ...+++|+++ ..++.+++|-
T Consensus 243 ~~~vlDpF~GsGtt~~aa~~~~---r~~ig~e~~~~~~~~~~~~~~Rl 287 (319)
T 1eg2_A 243 GSTVLDFFAGSGVTARVAIQEG---RNSICTDAAPVFKEYYQKQLTFL 287 (319)
T ss_dssp TCEEEETTCTTCHHHHHHHHHT---CEEEEEESSTHHHHHHHHHHHHC
T ss_pred CCEEEecCCCCCHHHHHHHHcC---CcEEEEECCccHHHHHHHHHHHH
Confidence 3789999999999998887775 4788999999 9999998874
No 398
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=62.49 E-value=40 Score=32.77 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=57.7
Q ss_pred ceEEEECCCC--chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 255 RTILDIGCGY--GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 255 ~~VLDIGCGt--G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
.+|.=||+|. +.++..|.+.|. ...|+++|.+++.++.+.+.|...... .+..++ .-...|+|+..-- . .
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr~~~~~~~a~~~G~~~~~~-~~~~~~--~~~~aDvVilavp---~-~ 105 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEGT-TSIAKV--EDFSPDFVMLSSP---V-R 105 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEEE-SCTTGG--GGGCCSEEEECSC---G-G
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHCCCcchhc-CCHHHH--hhccCCEEEEeCC---H-H
Confidence 6788899873 345555666664 237899999999998888877532221 111110 1135799986521 1 2
Q ss_pred cHHHHHHHHHhhcCCCcEEEE
Q 011964 333 KDGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 333 d~~~~L~ei~RvLKPGG~lvi 353 (474)
....++.++...|+||..++-
T Consensus 106 ~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp GHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHhhccCCCcEEEE
Confidence 335688999999999876543
No 399
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=62.19 E-value=12 Score=31.63 Aligned_cols=91 Identities=19% Similarity=0.145 Sum_probs=54.7
Q ss_pred ceEEEECCCC-chH-HHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC----CCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGY-GSF-GAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP----YPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGt-G~~-~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp----f~d~sFDlVvss~~l~ 328 (474)
.+|+=+|||. |.. +..|.+.| ..++.+|.+++.++.+++.+..+. .+|..+.. ..-..+|+|++...
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g---~~v~vid~~~~~~~~~~~~g~~~i--~gd~~~~~~l~~a~i~~ad~vi~~~~-- 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD---IPLVVIETSRTRVDELRERGVRAV--LGNAANEEIMQLAHLECAKWLILTIP-- 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHTTCEEE--ESCTTSHHHHHHTTGGGCSEEEECCS--
T ss_pred CCEEEECcCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHcCCCEE--ECCCCCHHHHHhcCcccCCEEEEECC--
Confidence 5788899864 332 22333444 478899999999988887665443 33432211 11236898886522
Q ss_pred cccccHH-HHHHHHHhhcCCCcEEEEEe
Q 011964 329 DWDQKDG-ILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 329 ~~~~d~~-~~L~ei~RvLKPGG~lvis~ 355 (474)
.+.. ..+....+.+.|+..++...
T Consensus 81 ---~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 81 ---NGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp ---CHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred ---ChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 2222 33455667788888777654
No 400
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=61.54 E-value=10 Score=37.77 Aligned_cols=92 Identities=12% Similarity=0.048 Sum_probs=58.3
Q ss_pred CCceEEEECCC--CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----CCCCCCeeEEEecc
Q 011964 253 GVRTILDIGCG--YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----PYPSLSFDMLHCAR 325 (474)
Q Consensus 253 ~~~~VLDIGCG--tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----pf~d~sFDlVvss~ 325 (474)
...+||=+|++ .|.++..+++... ..++++. +++-++.+++.|....+.. ...++ ...++.+|+|+-.-
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~-~~~~~~~~~~lGa~~vi~~-~~~~~~~~v~~~t~g~~d~v~d~~ 239 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSG--YIPIATC-SPHNFDLAKSRGAEEVFDY-RAPNLAQTIRTYTKNNLRYALDCI 239 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHHHHTTCSEEEET-TSTTHHHHHHHHTTTCCCEEEESS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe-CHHHHHHHHHcCCcEEEEC-CCchHHHHHHHHccCCccEEEECC
Confidence 34789999983 7888888887621 3455553 6777888888875433321 11111 01234599998542
Q ss_pred ccccccccHHHHHHHHHhhc-CCCcEEEEEe
Q 011964 326 CGVDWDQKDGILLLEVDRVL-KPGGYFVWTS 355 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvL-KPGG~lvis~ 355 (474)
. ....+....+.| ++||.++...
T Consensus 240 g-------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 240 T-------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp C-------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred C-------chHHHHHHHHHhhcCCCEEEEEe
Confidence 1 134678888888 6999998865
No 401
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=59.07 E-value=38 Score=33.15 Aligned_cols=92 Identities=14% Similarity=0.061 Sum_probs=53.1
Q ss_pred CceEEEECC--CCchHHHHhhhc-CCceeEEEEecCCH---HHHHHHHHcCCCcEEEeec--ccCC-CCCC--CCeeEEE
Q 011964 254 VRTILDIGC--GYGSFGAHLFSK-ELLTMCIANYEASG---SQVQLTLERGLPAMIGSFA--SKQL-PYPS--LSFDMLH 322 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~-g~~~~~v~giD~s~---~~l~~A~erg~~~~~~~~d--~~~L-pf~d--~sFDlVv 322 (474)
..+||=+|+ |.|.++..+++. |. ..++.++.++ +..+.+++.|....+...+ ...+ .... +.+|+|+
T Consensus 168 g~~VlV~Ga~G~vG~~aiqlak~~Ga--~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvi 245 (357)
T 1zsy_A 168 GDSVIQNASNSGVGQAVIQIAAALGL--RTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLAL 245 (357)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEE
T ss_pred CCEEEEeCCcCHHHHHHHHHHHHcCC--EEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEE
Confidence 378999997 567788888775 43 2344444432 3456777777544332111 0111 1111 1489988
Q ss_pred eccccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 323 CARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 323 ss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
-.-. ...+.+..++|++||.+++..
T Consensus 246 d~~g--------~~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 246 NCVG--------GKSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp ESSC--------HHHHHHHHTTSCTTCEEEECC
T ss_pred ECCC--------cHHHHHHHHhhCCCCEEEEEe
Confidence 5421 112346789999999999864
No 402
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=59.03 E-value=5.9 Score=39.11 Aligned_cols=44 Identities=25% Similarity=0.276 Sum_probs=30.2
Q ss_pred CCCCCeeEEEeccccc----------cccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 313 YPSLSFDMLHCARCGV----------DWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 313 f~d~sFDlVvss~~l~----------~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+++++||+|++.--.. .|.......|.++.|+|+|||.+++...
T Consensus 54 l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 54 LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 4567899999863211 0111234678899999999999998754
No 403
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=55.76 E-value=1.6e+02 Score=28.98 Aligned_cols=144 Identities=13% Similarity=0.050 Sum_probs=77.6
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHH---Hc------------------------CCCcEEEee
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTL---ER------------------------GLPAMIGSF 306 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~---er------------------------g~~~~~~~~ 306 (474)
...|+-+|||.=.....|...+.....+.-+|.-+.+....+ +. .-...++.+
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~ 170 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGA 170 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEEC
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEcc
Confidence 468999999999888888764323356777887554332111 10 112234444
Q ss_pred cccCC----------CCCCCCeeEEEeccccccccccH-HHHHHHHHhhcCCCcEEEEEeCCCCchhhhhh---------
Q 011964 307 ASKQL----------PYPSLSFDMLHCARCGVDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN--------- 366 (474)
Q Consensus 307 d~~~L----------pf~d~sFDlVvss~~l~~~~~d~-~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~--------- 366 (474)
|..++ .+..+.--++++..++..+.++. ..+|+.+.... |+|.+++.++....+...+.
T Consensus 171 DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~d~fg~~M~~~l~~~g 249 (334)
T 3iei_A 171 DLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMGDRFGQIMIENLRRRQ 249 (334)
T ss_dssp CTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTTSHHHHHHHHHHHTTT
T ss_pred ccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCCCHHHHHHHHHHHHhC
Confidence 54331 13334444666666666664433 35666666655 66777777765432111000
Q ss_pred -----HHHHHHHHHHHHHHHhhCceEEeeecceeEEe
Q 011964 367 -----KENQKRWNFVRDFVENLCWELVSQQDETVVWK 398 (474)
Q Consensus 367 -----~e~~~~w~~~~~la~~l~W~~~~~~~~~~iw~ 398 (474)
-.....-+...+.....||+.+.-.....+|.
T Consensus 250 ~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~~~~~~ 286 (334)
T 3iei_A 250 CDLAGVETCKSLESQKERLLSNGWETASAVDMMELYN 286 (334)
T ss_dssp CCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEHHHHHH
T ss_pred CCCcccccCCCHHHHHHHHHHcCCCcceeecHHHHHH
Confidence 00011124445667788898765555555664
No 404
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=53.99 E-value=63 Score=30.09 Aligned_cols=85 Identities=19% Similarity=0.129 Sum_probs=51.7
Q ss_pred eEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 256 TILDIGCGY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 256 ~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
+|.=||||. | .++..|.+.+. .|+.+|.+++.++.+.+.+...... .+.... ...|+|+..-- . ..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~----~~~D~vi~av~---~-~~ 69 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH---YLIGVSRQQSTCEKAVERQLVDEAG-QDLSLL----QTAKIIFLCTP---I-QL 69 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTSCSEEE-SCGGGG----TTCSEEEECSC---H-HH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHhCCCCcccc-CCHHHh----CCCCEEEEECC---H-HH
Confidence 466788764 2 23344555553 6888999998887777666543221 122222 35899986521 1 22
Q ss_pred HHHHHHHHHhhcCCCcEEE
Q 011964 334 DGILLLEVDRVLKPGGYFV 352 (474)
Q Consensus 334 ~~~~L~ei~RvLKPGG~lv 352 (474)
...++.++...++||..++
T Consensus 70 ~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHhhCCCCCEEE
Confidence 3567888888888887554
No 405
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=49.80 E-value=35 Score=29.77 Aligned_cols=92 Identities=14% Similarity=0.068 Sum_probs=52.8
Q ss_pred ceEEEECCCC-chH-HHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccC---C-CC-CCCCeeEEEeccc
Q 011964 255 RTILDIGCGY-GSF-GAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ---L-PY-PSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGt-G~~-~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~---L-pf-~d~sFDlVvss~~ 326 (474)
.+|+=+|+|. |.. +..|.+. | ..|+.+|.+++.++.+++.+..+... |..+ + .. .-..+|+|+....
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~~~~~~~~~~~~g~~~~~g--d~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG---KISLGIEIREEAAQQHRSEGRNVISG--DATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC---SCEEEEESCHHHHHHHHHTTCCEEEC--CTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHHhccC---CeEEEEECCHHHHHHHHHCCCCEEEc--CCCCHHHHHhccCCCCCCEEEEeCC
Confidence 5788888763 322 2233333 4 46888999999888887777554433 3221 1 11 1235898886421
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
. ......+....+.+.|++.++...
T Consensus 115 --~--~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 --H--HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp --S--HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred --C--hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 1 111233445666677788877754
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=49.20 E-value=81 Score=29.41 Aligned_cols=90 Identities=14% Similarity=0.146 Sum_probs=52.7
Q ss_pred eEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 256 TILDIGCGY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 256 ~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
+|.=||+|. | .++..|.+.|. ...|+++|.+++.++.+.+.+...... .+.... ..+ ..|+|+..-- . ..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~~~~~~~~~~~~g~~~~~~-~~~~~~-~~~-~aDvVilavp---~-~~ 74 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEGT-TSIAKV-EDF-SPDFVMLSSP---V-RT 74 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEEE-SCGGGG-GGT-CCSEEEECSC---H-HH
T ss_pred EEEEEecCHHHHHHHHHHHhcCC-CcEEEEEeCCHHHHHHHHHCCCccccc-CCHHHH-hcC-CCCEEEEcCC---H-HH
Confidence 577788764 2 23344445553 236888999998888887766532211 111111 111 5798886521 1 12
Q ss_pred HHHHHHHHHhhcCCCcEEEE
Q 011964 334 DGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 334 ~~~~L~ei~RvLKPGG~lvi 353 (474)
...++.++...+++|..++.
T Consensus 75 ~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 75 FREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp HHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHhhCCCCcEEEE
Confidence 34677888888999886554
No 407
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=46.14 E-value=26 Score=34.45 Aligned_cols=94 Identities=10% Similarity=0.082 Sum_probs=55.6
Q ss_pred ceEEEECCC-CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc--cCC-CCC-CCCeeEEEecccccc
Q 011964 255 RTILDIGCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS--KQL-PYP-SLSFDMLHCARCGVD 329 (474)
Q Consensus 255 ~~VLDIGCG-tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~--~~L-pf~-d~sFDlVvss~~l~~ 329 (474)
.+||=+|+| .|.++..+++.. ....|+++|.+++-++.+++.|....+...+. +.+ ... ...+|+|+-.-.
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~-~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~~g~g~Dvvid~~G--- 263 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVM-TPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVG--- 263 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC---
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHHhCCCCCcEEEECCC---
Confidence 789999975 344555565541 02478899999999999988775433321110 000 012 226999985422
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
......+....+. +||.+++...
T Consensus 264 --~~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 264 --SQATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp --CHHHHHHGGGGEE--EEEEEEECCC
T ss_pred --CchHHHHHHHhhc--CCCEEEEEeC
Confidence 1001155666666 9999988654
No 408
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=45.66 E-value=56 Score=33.25 Aligned_cols=43 Identities=12% Similarity=-0.111 Sum_probs=32.9
Q ss_pred ceEEEECCCCchHHHHhhhcCCce----eEEEEecCCHHHHHHHHHc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLT----MCIANYEASGSQVQLTLER 297 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~----~~v~giD~s~~~l~~A~er 297 (474)
.+|||+=||.|.+...|.+.|+.. .++.++|+++.+++.-+.+
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n 57 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAI 57 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHH
Confidence 589999999999999998776321 2378899999887655443
No 409
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=43.34 E-value=19 Score=35.61 Aligned_cols=93 Identities=15% Similarity=0.088 Sum_probs=55.9
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC---CCCCCeeEEEeccccc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP---YPSLSFDMLHCARCGV 328 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp---f~d~sFDlVvss~~l~ 328 (474)
..+||=+|+ |.|..+..+++... ..+++++ +++.++.+++.|....+.. ...++. .....+|+|+-.-.
T Consensus 184 g~~VlV~Ga~G~vG~~~~qla~~~G--a~Vi~~~-~~~~~~~~~~lGa~~v~~~-~~~~~~~~~~~~~g~D~vid~~g-- 257 (375)
T 2vn8_A 184 GKRVLILGASGGVGTFAIQVMKAWD--AHVTAVC-SQDASELVRKLGADDVIDY-KSGSVEEQLKSLKPFDFILDNVG-- 257 (375)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHHHHTTCSEEEET-TSSCHHHHHHTSCCBSEEEESSC--
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEe-ChHHHHHHHHcCCCEEEEC-CchHHHHHHhhcCCCCEEEECCC--
Confidence 478999983 46777777776521 3566666 5566777877775433321 111100 01146999985422
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
.....+....+.|++||.++....
T Consensus 258 ----~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 258 ----GSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp ----TTHHHHGGGGBCSSSCCEEEESCC
T ss_pred ----ChhhhhHHHHHhhcCCcEEEEeCC
Confidence 111356778889999999988653
No 410
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=43.24 E-value=19 Score=35.30 Aligned_cols=89 Identities=11% Similarity=0.072 Sum_probs=54.2
Q ss_pred ceEEEE-CCC-CchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCC--------CCCeeEEEec
Q 011964 255 RTILDI-GCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP--------SLSFDMLHCA 324 (474)
Q Consensus 255 ~~VLDI-GCG-tG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~--------d~sFDlVvss 324 (474)
.+||=. |+| .|..+..+++.. ...+++++.+++.++.+++.|....+. .....+. ...+|+|+-.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~---~~~~~~~~~v~~~~~~~g~D~vid~ 240 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKDIGAAHVLN---EKAPDFEATLREVMKAEQPRIFLDA 240 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHTCSEEEE---TTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCCEEEE---CCcHHHHHHHHHHhcCCCCcEEEEC
Confidence 455543 332 455555565541 247888898888888888877543332 1111111 1359999854
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
-. ...+.+..+.|++||.+++...
T Consensus 241 ~g--------~~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 241 VT--------GPLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp SC--------HHHHHHHHHHSCTTCEEEECCC
T ss_pred CC--------ChhHHHHHhhhcCCCEEEEEec
Confidence 22 1245778899999999998753
No 411
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=42.84 E-value=40 Score=38.56 Aligned_cols=54 Identities=11% Similarity=-0.012 Sum_probs=40.6
Q ss_pred CCceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeec
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFA 307 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d 307 (474)
...+++|+-||.|.++.-|.+.|+. ..+.++|+++..++.-+.+.....+...|
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~-~vv~avEid~~A~~ty~~N~p~~~~~~~D 592 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGIS-DTLWAIEMWDPAAQAFRLNNPGSTVFTED 592 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSE-EEEEEECSSHHHHHHHHHHCTTSEEECSC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhCCCCcccccc
Confidence 3458999999999999999888752 35779999999988776665444444333
No 412
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=42.60 E-value=20 Score=37.05 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=29.3
Q ss_pred CceEEEECCCCchHHHHhhhc----CCceeEEEEecCCHHHHHH
Q 011964 254 VRTILDIGCGYGSFGAHLFSK----ELLTMCIANYEASGSQVQL 293 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~----g~~~~~v~giD~s~~~l~~ 293 (474)
.-+|+|+|.|+|.++..+++. +....++..+|+|+.+.+.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~ 181 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRAR 181 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHH
Confidence 358999999999988877543 2223478899999866543
No 413
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=42.25 E-value=9.8 Score=38.28 Aligned_cols=97 Identities=12% Similarity=0.032 Sum_probs=53.0
Q ss_pred CCceEEEECCCCchHHHHhh---h-cCCceeEEEEecCCHHHHHHHHH-cCCCcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 253 GVRTILDIGCGYGSFGAHLF---S-KELLTMCIANYEASGSQVQLTLE-RGLPAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La---~-~g~~~~~v~giD~s~~~l~~A~e-rg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
.+.+|+=+|+| ..+..++ . .| ..|+++|.++..++.+.+ .+........+...+.-.-..+|+|+..-.
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~G---a~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~- 240 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGMG---ATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL- 240 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCC-
Confidence 35789999985 4443333 2 24 478899999988877765 344332211111111000025799986421
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
......+..+.+++.+.+||||.++...
T Consensus 241 ~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 241 VPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred cCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 1111111122456778899999988654
No 414
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=39.56 E-value=48 Score=27.30 Aligned_cols=77 Identities=13% Similarity=-0.028 Sum_probs=46.8
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccccH
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKD 334 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d~ 334 (474)
.+|| +-|+.|..+..|+++ |-+.|.++++++.+.......+.-.-..||+|+.. +..
T Consensus 7 mkIl-L~C~aGmSTsllv~k---------------m~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLg-------PQV 63 (108)
T 3nbm_A 7 LKVL-VLCAGSGTSAQLANA---------------INEGANLTEVRVIANSGAYGAHYDIMGVYDLIILA-------PQV 63 (108)
T ss_dssp EEEE-EEESSSSHHHHHHHH---------------HHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEEC-------GGG
T ss_pred ceEE-EECCCCCCHHHHHHH---------------HHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEC-------hHH
Confidence 4566 457777666666554 66778888988777543333333222459999876 222
Q ss_pred HHHHHHHHhhcCCCcEEEEE
Q 011964 335 GILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 335 ~~~L~ei~RvLKPGG~lvis 354 (474)
...+.++.....+-|.=+..
T Consensus 64 ~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 64 RSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp GGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHhhhcCCcEEE
Confidence 33556677777776654443
No 415
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=39.08 E-value=45 Score=33.92 Aligned_cols=91 Identities=13% Similarity=0.120 Sum_probs=58.6
Q ss_pred ceEEEECCCCchHHHHhh----hcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC----CCCCCeeEEEeccc
Q 011964 255 RTILDIGCGYGSFGAHLF----SKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP----YPSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La----~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp----f~d~sFDlVvss~~ 326 (474)
.+|+=+|+| .++..++ +.+ ..|+.+|.+++.++.+++.+.++.+. |+.+.. ..-...|+|++..-
T Consensus 5 ~~viIiG~G--r~G~~va~~L~~~g---~~vvvId~d~~~v~~~~~~g~~vi~G--Dat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 5 MRVIIAGFG--RFGQITGRLLLSSG---VKMVVLDHDPDHIETLRKFGMKVFYG--DATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTT---CCEEEEECCHHHHHHHHHTTCCCEES--CTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CeEEEECCC--HHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHhCCCeEEEc--CCCCHHHHHhcCCCccCEEEECCC
Confidence 568888885 4444443 344 47889999999999998888776655 333321 12245888886522
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
- +.....+....|-+.|...++....
T Consensus 78 ---~-~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 78 ---D-PQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp ---S-HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ---C-hHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 0 1223556677788889888776554
No 416
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=38.60 E-value=1.6e+02 Score=30.04 Aligned_cols=88 Identities=16% Similarity=0.229 Sum_probs=54.1
Q ss_pred CceEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-----------CC-------C--cEEEeecccCC
Q 011964 254 VRTILDIGCGY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------GL-------P--AMIGSFASKQL 311 (474)
Q Consensus 254 ~~~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-----------g~-------~--~~~~~~d~~~L 311 (474)
..+|.=||+|. | .++..++..|+ .|+.+|.+++.++.+++. +. . ..+ ..+.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~---~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI---SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG-
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH-
Confidence 45789999986 3 35555666664 688899999887665431 10 0 112 112211
Q ss_pred CCCCCCeeEEEeccccccccccH---HHHHHHHHhhcCCCcEEEEE
Q 011964 312 PYPSLSFDMLHCARCGVDWDQKD---GILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 312 pf~d~sFDlVvss~~l~~~~~d~---~~~L~ei~RvLKPGG~lvis 354 (474)
+ ...|+|+..-. .+. ..++.++...++||.+++.+
T Consensus 112 -~--~~aDlVIeaVp-----e~~~~k~~v~~~l~~~~~~~~ii~sn 149 (463)
T 1zcj_A 112 -L--STVDLVVEAVF-----EDMNLKKKVFAELSALCKPGAFLCTN 149 (463)
T ss_dssp -G--TTCSEEEECCC-----SCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred -H--CCCCEEEEcCC-----CCHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 1 35799986521 232 46888899999998877643
No 417
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=38.27 E-value=1.6e+02 Score=26.94 Aligned_cols=66 Identities=14% Similarity=0.001 Sum_probs=41.0
Q ss_pred ceEEEECCCCchHHHHhhhcCC-ceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKEL-LTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~-~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~ 326 (474)
++||=+|+ |..+..+++.-. ....|++++-++......... .+.+..+|..++. -..+|+|+....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRAS--GAEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHT--TEEEEESSSSCCC--CTTCCEEEECCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhC--CCeEEEecccccc--cCCCCEEEECCC
Confidence 57999994 887777654300 114677777776554443333 3566667776655 456899987644
No 418
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=38.25 E-value=1.3e+02 Score=28.18 Aligned_cols=94 Identities=14% Similarity=0.185 Sum_probs=53.7
Q ss_pred ceEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEE------e---ecccCCCCCCCCeeEEEe
Q 011964 255 RTILDIGCGY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIG------S---FASKQLPYPSLSFDMLHC 323 (474)
Q Consensus 255 ~~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~------~---~d~~~Lpf~d~sFDlVvs 323 (474)
.+|.=||+|. | .++..|++.|. .|+.+|.+++.++...+.+...... . .+..++.-.-..+|+|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN---DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC---cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 4688899873 2 23344555553 7888999988887777666432110 0 011111000025899886
Q ss_pred ccccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 324 s~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
.-- - .....++.++...++|+..++...
T Consensus 81 ~v~---~-~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 81 LTK---A-QQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CSC---H-HHHHHHHHHHGGGCCTTCEEEECC
T ss_pred Eec---c-ccHHHHHHHHHHhcCCCCEEEEec
Confidence 522 1 223567888888888887665543
No 419
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=37.15 E-value=19 Score=35.30 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=49.5
Q ss_pred CceEEEECC--CCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC-----CCCCCCeeEEEeccc
Q 011964 254 VRTILDIGC--GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL-----PYPSLSFDMLHCARC 326 (474)
Q Consensus 254 ~~~VLDIGC--GtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~L-----pf~d~sFDlVvss~~ 326 (474)
..+||=+|+ |.|.++..+++.. ....+++++ ++...+.++ .+....+. ...++ ....+.||+|+-.-.
T Consensus 143 g~~VlV~Ga~G~vG~~a~qla~~~-g~~~V~~~~-~~~~~~~~~-~ga~~~~~--~~~~~~~~~~~~~~~g~Dvv~d~~g 217 (349)
T 4a27_A 143 GMSVLVHSAGGGVGQAVAQLCSTV-PNVTVFGTA-STFKHEAIK-DSVTHLFD--RNADYVQEVKRISAEGVDIVLDCLC 217 (349)
T ss_dssp TCEEEESSTTSHHHHHHHHHHTTS-TTCEEEEEE-CGGGHHHHG-GGSSEEEE--TTSCHHHHHHHHCTTCEEEEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHc-CCcEEEEeC-CHHHHHHHH-cCCcEEEc--CCccHHHHHHHhcCCCceEEEECCC
Confidence 478999998 3577777777652 124566666 444455555 55433222 11111 012357999985421
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
...+.+..+.|++||.+++...
T Consensus 218 --------~~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 218 --------GDNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp ---------------CTTEEEEEEEEEEC-
T ss_pred --------chhHHHHHHHhhcCCEEEEECC
Confidence 1134678899999999998764
No 420
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=37.11 E-value=1.2e+02 Score=28.46 Aligned_cols=84 Identities=14% Similarity=0.107 Sum_probs=50.7
Q ss_pred ceEEEECC-CC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccc
Q 011964 255 RTILDIGC-GY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 331 (474)
Q Consensus 255 ~~VLDIGC-Gt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~ 331 (474)
.+|.=||+ |. | .++..|.+.|. .|+.+|.+++.++.+.+.++.. .+... .-...|+|+..-- -
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~---~V~~~~r~~~~~~~~~~~g~~~----~~~~~---~~~~aDvVi~av~---~- 77 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH---HLAAIEIAPEGRDRLQGMGIPL----TDGDG---WIDEADVVVLALP---D- 77 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS---EEEEECCSHHHHHHHHHTTCCC----CCSSG---GGGTCSEEEECSC---H-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECCHHHHHHHHhcCCCc----CCHHH---HhcCCCEEEEcCC---c-
Confidence 47888998 74 3 24445555553 6788999988877776655322 11111 1125799986521 1
Q ss_pred ccHHHHHHHHHhhcCCCcEEE
Q 011964 332 QKDGILLLEVDRVLKPGGYFV 352 (474)
Q Consensus 332 ~d~~~~L~ei~RvLKPGG~lv 352 (474)
.....++.++...++||..++
T Consensus 78 ~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 78 NIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp HHHHHHHHHHGGGSCTTCEEE
T ss_pred hHHHHHHHHHHHhCCCCCEEE
Confidence 123567788888888876544
No 421
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=36.90 E-value=53 Score=26.95 Aligned_cols=52 Identities=8% Similarity=0.126 Sum_probs=31.7
Q ss_pred EECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEec
Q 011964 259 DIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCA 324 (474)
Q Consensus 259 DIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss 324 (474)
=+-||+|.-+..++.. .+-+.+.+.++.+.+...+...++-....+|+|+++
T Consensus 25 lvvC~sG~gTS~ll~~--------------kl~~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist 76 (113)
T 1tvm_A 25 IVACGGAVATSTMAAE--------------EIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTT 76 (113)
T ss_dssp EEESCSCSSHHHHHHH--------------HHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEES
T ss_pred EEECCCCHHHHHHHHH--------------HHHHHHHHcCCeEEEEEecHHHHhhccCCCCEEEEC
Confidence 3668888777776433 233455666776655555555554323468988876
No 422
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=35.85 E-value=23 Score=35.92 Aligned_cols=95 Identities=14% Similarity=0.123 Sum_probs=53.7
Q ss_pred CCceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeec--c-------------------c
Q 011964 253 GVRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFA--S-------------------K 309 (474)
Q Consensus 253 ~~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d--~-------------------~ 309 (474)
.+.+|+=||+|. |..+..++.. | ..|+.+|.++..++.+.+.|.. +...+ . .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D~~~~~l~~~~~lGa~--~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG---AKTTGYDVRPEVAEQVRSVGAQ--WLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT---CEEEEECSSGGGHHHHHHTTCE--ECCCC-------------CHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHcCCe--EEeccccccccccchhhhhHHHHhhhHH
Confidence 347899999984 3444444433 4 4788999999888777775432 21110 0 0
Q ss_pred CCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEE
Q 011964 310 QLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 310 ~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvi 353 (474)
.+.-.-..+|+|+.+- +..-...+.-+-+++.+.+|||.+++=
T Consensus 258 ~l~e~l~~aDIVI~tv-~iPg~~ap~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 258 ALEDAITKFDIVITTA-LVPGRPAPRLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp HHHHHHTTCSEEEECC-CCTTSCCCCCBCHHHHHTSCTTCEEEE
T ss_pred HHHHHHhcCCEEEECC-CCCCcccceeecHHHHhcCCCCcEEEE
Confidence 0000014689999652 121111112234688888999887764
No 423
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=35.69 E-value=30 Score=35.18 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=42.2
Q ss_pred CceEEEECCCCchHHHHhhhc--C----CceeEEEEecCCHHHHHHHHHc--CC-CcEEEeecccCCCCCCCCeeEEEec
Q 011964 254 VRTILDIGCGYGSFGAHLFSK--E----LLTMCIANYEASGSQVQLTLER--GL-PAMIGSFASKQLPYPSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~--g----~~~~~v~giD~s~~~l~~A~er--g~-~~~~~~~d~~~Lpf~d~sFDlVvss 324 (474)
+-.|+|+|.|.|.++..+++. . ....++..+|+|+...+.-+++ +. ++.+.. +.+++| ++ .=+|+++
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~W~~-~l~~lp--~~-~~~viAN 156 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHD-SFEDVP--EG-PAVILAN 156 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEES-SGGGSC--CS-SEEEEEE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeEEeC-ChhhcC--CC-CeEEEec
Confidence 357999999999998877542 1 1235888999999877644443 11 233331 234444 22 3466666
Q ss_pred ccc
Q 011964 325 RCG 327 (474)
Q Consensus 325 ~~l 327 (474)
..+
T Consensus 157 E~f 159 (387)
T 1zkd_A 157 EYF 159 (387)
T ss_dssp SSG
T ss_pred ccc
Confidence 543
No 424
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=35.65 E-value=89 Score=29.70 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=49.0
Q ss_pred ceEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 255 RTILDIGCGY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 255 ~~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
.+|.=||+|. | .++..|++.|. .|+.+|.+++.++.+.+.+... ...+..+. -...|+|+..-. -..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~---~V~~~dr~~~~~~~~~~~g~~~--~~~~~~e~---~~~aDvvi~~vp---~~~ 76 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL---STWGADLNPQACANLLAEGACG--AAASAREF---AGVVDALVILVV---NAA 76 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTCSE--EESSSTTT---TTTCSEEEECCS---SHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC---eEEEEECCHHHHHHHHHcCCcc--ccCCHHHH---HhcCCEEEEECC---CHH
Confidence 5688888773 2 23444555553 6888999999888877766432 11121111 124688886521 101
Q ss_pred cHHHHH---HHHHhhcCCCcEEEE
Q 011964 333 KDGILL---LEVDRVLKPGGYFVW 353 (474)
Q Consensus 333 d~~~~L---~ei~RvLKPGG~lvi 353 (474)
..+.++ .++...|+||..++-
T Consensus 77 ~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 77 QVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp HHHHHHC--CCCGGGSCTTCEEEE
T ss_pred HHHHHHhChhhHHhhCCCCCEEEe
Confidence 122333 455667777766654
No 425
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=35.24 E-value=60 Score=34.00 Aligned_cols=89 Identities=15% Similarity=0.110 Sum_probs=53.9
Q ss_pred CCceEEEECCCCchHHHHhhhc--CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSK--ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 330 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~--g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~ 330 (474)
...+|+=+|+| ..+..+++. . ....|+++|.++...+.|++.|.. +. +..++ + ..+|+|+..-...+.
T Consensus 273 ~GktV~IiG~G--~IG~~~A~~lka-~Ga~Viv~d~~~~~~~~A~~~Ga~--~~--~l~e~-l--~~aDvVi~atgt~~~ 342 (494)
T 3ce6_A 273 GGKKVLICGYG--DVGKGCAEAMKG-QGARVSVTEIDPINALQAMMEGFD--VV--TVEEA-I--GDADIVVTATGNKDI 342 (494)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHTTCE--EC--CHHHH-G--GGCSEEEECSSSSCS
T ss_pred CcCEEEEEccC--HHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHcCCE--Ee--cHHHH-H--hCCCEEEECCCCHHH
Confidence 34789999985 344333322 1 124789999999888888777753 22 21111 1 358999875221221
Q ss_pred cccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 331 DQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 331 ~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
. -.+..+.+||||+++.....
T Consensus 343 i------~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 343 I------MLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp B------CHHHHHHSCTTCEEEECSSS
T ss_pred H------HHHHHHhcCCCcEEEEeCCC
Confidence 1 12566779999999887653
No 426
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=33.76 E-value=1.6e+02 Score=27.65 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=45.8
Q ss_pred CceEEEECCCCch---HHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC-----CCCCCeeEEEecc
Q 011964 254 VRTILDIGCGYGS---FGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP-----YPSLSFDMLHCAR 325 (474)
Q Consensus 254 ~~~VLDIGCGtG~---~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp-----f~d~sFDlVvss~ 325 (474)
.+++|=.|.+.|. .+..|++.|.. +-+...+..++..+...+.+..+....+|..+.. +..+..|+++.+-
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~-Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA 87 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAE-VVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA 87 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCE-EEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence 4678888888875 55667777742 2333444445666667777777777766654422 4457799999764
No 427
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=32.81 E-value=1.7e+02 Score=28.09 Aligned_cols=96 Identities=15% Similarity=0.082 Sum_probs=56.1
Q ss_pred CceEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEE-----E-eec-ccCCCCCCCCeeEEEec
Q 011964 254 VRTILDIGCGY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI-----G-SFA-SKQLPYPSLSFDMLHCA 324 (474)
Q Consensus 254 ~~~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~-----~-~~d-~~~Lpf~d~sFDlVvss 324 (474)
..+|.=||+|. | .++..|++.|. .|+.+ ..++.++..++.++.... . ... ..+.. .-..+|+|+..
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~---~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vila 93 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGH---EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLVLFC 93 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTC---EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCC---eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEEEEE
Confidence 35788898873 2 34455555553 56667 777777777766643220 0 000 01111 11368998865
Q ss_pred cccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 325 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 325 ~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
-- . .....++.++...++|+..++....+.
T Consensus 94 vk--~--~~~~~~l~~l~~~l~~~~~iv~~~nGi 123 (318)
T 3hwr_A 94 VK--S--TDTQSAALAMKPALAKSALVLSLQNGV 123 (318)
T ss_dssp CC--G--GGHHHHHHHHTTTSCTTCEEEEECSSS
T ss_pred cc--c--ccHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 21 1 234678999999999988776655443
No 428
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=32.03 E-value=1e+02 Score=25.25 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=50.8
Q ss_pred ceEEEECCCCchHHHHhh----hcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC----CCCCCeeEEEeccc
Q 011964 255 RTILDIGCGYGSFGAHLF----SKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP----YPSLSFDMLHCARC 326 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La----~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lp----f~d~sFDlVvss~~ 326 (474)
.+|+=+|+|. ++..++ +.| ..++.+|.+++.++.+.+.+.. +..+|..+.. ..-..+|+|+....
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g---~~V~~id~~~~~~~~~~~~~~~--~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAG---KKVLAVDKSKEKIELLEDEGFD--AVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHTTCE--EEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCH--HHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHCCCc--EEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 5789999854 554443 445 4688899999988888776643 3334433211 12246898886522
Q ss_pred cccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 327 l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
.......+....+-+. ...++...
T Consensus 80 ----~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 80 ----DDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp ----CHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred ----CHHHHHHHHHHHHHhC-CceEEEEE
Confidence 1112234445555555 55555544
No 429
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=30.32 E-value=2.8e+02 Score=28.55 Aligned_cols=92 Identities=10% Similarity=-0.018 Sum_probs=53.2
Q ss_pred CCceEEEECCCC--chHHHHhhhcCCceeEEEEecCCHHH--------HHHHHHcCC-Cc--------EE-EeecccCCC
Q 011964 253 GVRTILDIGCGY--GSFGAHLFSKELLTMCIANYEASGSQ--------VQLTLERGL-PA--------MI-GSFASKQLP 312 (474)
Q Consensus 253 ~~~~VLDIGCGt--G~~~~~La~~g~~~~~v~giD~s~~~--------l~~A~erg~-~~--------~~-~~~d~~~Lp 312 (474)
...+|-=||+|+ +.++..+++.|+ .|+.+|.+++. ++.+.+++. .. .+ ...+.+.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~---~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~a-- 127 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGI---ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHK-- 127 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGG--
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC---eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHH--
Confidence 346788899985 445666667664 78889999872 222333332 10 11 1122221
Q ss_pred CCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEE
Q 011964 313 YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVW 353 (474)
Q Consensus 313 f~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvi 353 (474)
+ ...|+|+..-. ... .-...++.++...++|+.+|+-
T Consensus 128 l--~~aDlVIeAVp-e~~-~vk~~v~~~l~~~~~~~aIlas 164 (460)
T 3k6j_A 128 L--SNCDLIVESVI-EDM-KLKKELFANLENICKSTCIFGT 164 (460)
T ss_dssp C--TTCSEEEECCC-SCH-HHHHHHHHHHHTTSCTTCEEEE
T ss_pred H--ccCCEEEEcCC-CCH-HHHHHHHHHHHhhCCCCCEEEe
Confidence 2 34799986521 111 1124688999999999988764
No 430
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=30.30 E-value=53 Score=32.05 Aligned_cols=91 Identities=10% Similarity=0.064 Sum_probs=51.2
Q ss_pred ceEEEECC--CCchHHHHhhhc-CCceeEEEEec--CCH--HHHHHHHHcCCCcEEEeecc--cCCC-----C---CCCC
Q 011964 255 RTILDIGC--GYGSFGAHLFSK-ELLTMCIANYE--ASG--SQVQLTLERGLPAMIGSFAS--KQLP-----Y---PSLS 317 (474)
Q Consensus 255 ~~VLDIGC--GtG~~~~~La~~-g~~~~~v~giD--~s~--~~l~~A~erg~~~~~~~~d~--~~Lp-----f---~d~s 317 (474)
.+||=+|+ |.|.++..+++. |. .++++. .+. ...+.+++.|....+...+. .++. . ..+.
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga---~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g 245 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNF---NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 245 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTC---EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCC
Confidence 68998886 467777777765 43 344443 222 23456666675433321110 1110 1 1246
Q ss_pred eeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 318 FDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 318 FDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
||+|+-.-. ...+. +..++|++||.+++...
T Consensus 246 ~Dvvid~~G-------~~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 246 AKLALNCVG-------GKSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp EEEEEESSC-------HHHHH-HHHHTSCTTCEEEECCC
T ss_pred ceEEEECCC-------chhHH-HHHHHhccCCEEEEecC
Confidence 999985422 12233 67899999999988653
No 431
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=29.81 E-value=2e+02 Score=26.66 Aligned_cols=89 Identities=20% Similarity=0.168 Sum_probs=51.9
Q ss_pred ceEEEECCCC--chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 255 RTILDIGCGY--GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 255 ~~VLDIGCGt--G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
.+|.=||+|. +.++..|.+.+. ...|+.+|.+++.++.+.+.+...... .+.... -...|+|+..-- . .
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~~~~~~~~~~~~g~~~~~~-~~~~~~---~~~aDvVilavp---~-~ 77 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHP-HYKIVGYNRSDRSRDIALERGIVDEAT-ADFKVF---AALADVIILAVP---I-K 77 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHTTSCSEEE-SCTTTT---GGGCSEEEECSC---H-H
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCC-CcEEEEEcCCHHHHHHHHHcCCccccc-CCHHHh---hcCCCEEEEcCC---H-H
Confidence 4688888775 223444554432 246888999998887776665432111 111111 135799886521 1 1
Q ss_pred cHHHHHHHHHhh-cCCCcEEE
Q 011964 333 KDGILLLEVDRV-LKPGGYFV 352 (474)
Q Consensus 333 d~~~~L~ei~Rv-LKPGG~lv 352 (474)
....++.++... |++|..++
T Consensus 78 ~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 78 KTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHHHHHHHTSCCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCCEEE
Confidence 225678888888 88876555
No 432
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=29.48 E-value=24 Score=28.91 Aligned_cols=53 Identities=17% Similarity=0.128 Sum_probs=35.7
Q ss_pred eEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEec
Q 011964 256 TILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCA 324 (474)
Q Consensus 256 ~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss 324 (474)
+|| +-||.|..+..+++. +-+.++++|+++.+...+...+.-....+|+|+.+
T Consensus 5 kIl-l~Cg~G~sTS~l~~k---------------~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~ 57 (106)
T 1e2b_A 5 HIY-LFSSAGMSTSLLVSK---------------MRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLG 57 (106)
T ss_dssp EEE-EECSSSTTTHHHHHH---------------HHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEEC
T ss_pred EEE-EECCCchhHHHHHHH---------------HHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEc
Confidence 455 779999887766543 55677888988877666655543212468999876
No 433
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=29.20 E-value=28 Score=34.66 Aligned_cols=97 Identities=12% Similarity=0.116 Sum_probs=51.2
Q ss_pred CCceEEEECCCCchHHHHhh----hcCCceeEEEEecCCHHHHHHHHH-cCCCcEEEeecccCCCCCCCCeeEEEecccc
Q 011964 253 GVRTILDIGCGYGSFGAHLF----SKELLTMCIANYEASGSQVQLTLE-RGLPAMIGSFASKQLPYPSLSFDMLHCARCG 327 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La----~~g~~~~~v~giD~s~~~l~~A~e-rg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l 327 (474)
.+.+|+=+|+| ..+..++ ..| ..|+.+|.++..++.+.+ .+..+.....+...+.-.-..+|+|+..-.
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~G---a~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g- 238 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMG---AQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVL- 238 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCC-
Confidence 34789999985 4443333 234 478899999887776655 343321111111111000025899986522
Q ss_pred ccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 328 VDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 328 ~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
......+..+.+++.+.+||||.++...
T Consensus 239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 1110111113467778889999887654
No 434
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=27.85 E-value=1.2e+02 Score=28.12 Aligned_cols=85 Identities=13% Similarity=0.044 Sum_probs=49.2
Q ss_pred eEEEECCCC-ch-HHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccccccc
Q 011964 256 TILDIGCGY-GS-FGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 333 (474)
Q Consensus 256 ~VLDIGCGt-G~-~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~d 333 (474)
+|.=||+|. |. ++..|.+ +. .|+.+|.+++..+...+.+... .. ..+. . ...|+|+..-. ....
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~---~V~~~~~~~~~~~~~~~~g~~~--~~--~~~~-~--~~~D~vi~~v~---~~~~ 68 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF---PTLVWNRTFEKALRHQEEFGSE--AV--PLER-V--AEARVIFTCLP---TTRE 68 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS---CEEEECSSTHHHHHHHHHHCCE--EC--CGGG-G--GGCSEEEECCS---SHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CC---eEEEEeCCHHHHHHHHHCCCcc--cC--HHHH-H--hCCCEEEEeCC---ChHH
Confidence 577788885 33 3445555 54 5777898887776665555322 11 1111 1 25799886521 1112
Q ss_pred HHHHHHHHHhhcCCCcEEEEE
Q 011964 334 DGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 334 ~~~~L~ei~RvLKPGG~lvis 354 (474)
...++.++...+++|..++..
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEEC
T ss_pred HHHHHHHHHhhCCCCCEEEEC
Confidence 345677888888888766543
No 435
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.62 E-value=3.2e+02 Score=24.85 Aligned_cols=100 Identities=16% Similarity=0.132 Sum_probs=56.8
Q ss_pred CceEEEECCCCch---HHHHhhhcCCceeEEEEecCCHHHHHHHHHc-CCCcEEEeecccCCC-----C-----CCCCee
Q 011964 254 VRTILDIGCGYGS---FGAHLFSKELLTMCIANYEASGSQVQLTLER-GLPAMIGSFASKQLP-----Y-----PSLSFD 319 (474)
Q Consensus 254 ~~~VLDIGCGtG~---~~~~La~~g~~~~~v~giD~s~~~l~~A~er-g~~~~~~~~d~~~Lp-----f-----~d~sFD 319 (474)
.+++|=.|++.|. .+..|++.|. +|+.++.+++.++...+. +..+.+..+|..+.. + .-+..|
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGA---EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3678988977664 4455566664 677778887766554332 444555555544321 0 013689
Q ss_pred EEEeccccccccc----cHH--------------HHHHHHHhhcCCCcEEEEEeC
Q 011964 320 MLHCARCGVDWDQ----KDG--------------ILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 320 lVvss~~l~~~~~----d~~--------------~~L~ei~RvLKPGG~lvis~~ 356 (474)
+++.+-......+ +.+ .+.+.+.+.++.+|.+++..-
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 8887643222110 111 235566667778898887643
No 436
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=26.62 E-value=1.2e+02 Score=30.06 Aligned_cols=92 Identities=10% Similarity=-0.004 Sum_probs=54.3
Q ss_pred ceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHH--H-HHHHHcCCC---cEEEeecccCCCCCCCCeeEEEeccccc
Q 011964 255 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQ--V-QLTLERGLP---AMIGSFASKQLPYPSLSFDMLHCARCGV 328 (474)
Q Consensus 255 ~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~--l-~~A~erg~~---~~~~~~d~~~Lpf~d~sFDlVvss~~l~ 328 (474)
.+||.|+.+.|.++..|+..++ ..+ -|.--.. + ..+..+++. +.+. +. +.-....||+|+.-.. -
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~--~~~--~ds~~~~~~~~~n~~~~~~~~~~~~~~--~~--~~~~~~~~~~v~~~lp-k 110 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKP--YSI--GDSYISELATRENLRLNGIDESSVKFL--DS--TADYPQQPGVVLIKVP-K 110 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCC--EEE--ESCHHHHHHHHHHHHHTTCCGGGSEEE--ET--TSCCCSSCSEEEEECC-S
T ss_pred CCEEEECCCCCHHHHhhccCCc--eEE--EhHHHHHHHHHHHHHHcCCCccceEec--cc--ccccccCCCEEEEEcC-C
Confidence 5799999999999999886643 222 2422111 1 122334554 2332 22 2222357999985321 1
Q ss_pred cccccHHHHHHHHHhhcCCCcEEEEEeC
Q 011964 329 DWDQKDGILLLEVDRVLKPGGYFVWTSP 356 (474)
Q Consensus 329 ~~~~d~~~~L~ei~RvLKPGG~lvis~~ 356 (474)
+. ......|.++...|+||+.+++..-
T Consensus 111 ~~-~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 111 TL-ALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp CH-HHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred CH-HHHHHHHHHHHhhCCCCCEEEEEec
Confidence 11 2234678888999999999987764
No 437
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=26.13 E-value=1.1e+02 Score=30.29 Aligned_cols=90 Identities=13% Similarity=0.036 Sum_probs=52.8
Q ss_pred ceEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 255 RTILDIGCGY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 255 ~~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
.+|.=||+|. | .++..|++.| ..|+++|.+++.++.+.+.++... .+..++--.....|+|+..-. - .
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~dr~~~~~~~l~~~g~~~~---~s~~e~~~~a~~~DvVi~~vp---~-~ 92 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGG---HECVVYDLNVNAVQALEREGIAGA---RSIEEFCAKLVKPRVVWLMVP---A-A 92 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTTTCBCC---SSHHHHHHHSCSSCEEEECSC---G-G
T ss_pred CEEEEECchHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHCCCEEe---CCHHHHHhcCCCCCEEEEeCC---H-H
Confidence 5688888763 2 2344455555 468889999988887776653211 011111000123588886522 1 1
Q ss_pred cHHHHHHHHHhhcCCCcEEEEE
Q 011964 333 KDGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 333 d~~~~L~ei~RvLKPGG~lvis 354 (474)
..+.++.++...|++|..++-.
T Consensus 93 ~v~~vl~~l~~~l~~g~iiId~ 114 (358)
T 4e21_A 93 VVDSMLQRMTPLLAANDIVIDG 114 (358)
T ss_dssp GHHHHHHHHGGGCCTTCEEEEC
T ss_pred HHHHHHHHHHhhCCCCCEEEeC
Confidence 4467888898999988766543
No 438
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=25.80 E-value=96 Score=29.28 Aligned_cols=42 Identities=21% Similarity=0.326 Sum_probs=29.7
Q ss_pred ceEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCC
Q 011964 255 RTILDIGCGY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGL 299 (474)
Q Consensus 255 ~~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~ 299 (474)
.+|.=||+|. | .++..|++.|. .|+.+|.+++.++.+.+.++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~---~V~~~d~~~~~~~~~~~~g~ 47 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY---LLNVFDLVQSAVDGLVAAGA 47 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC---EEEEECSSHHHHHHHHHTTC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC---eEEEEcCCHHHHHHHHHCCC
Confidence 5688889885 2 34455666664 78889999988887776653
No 439
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=25.47 E-value=46 Score=32.34 Aligned_cols=50 Identities=20% Similarity=0.192 Sum_probs=32.4
Q ss_pred CCCCCCCeeEEEecc----cccccc--ccHH----HHHHHHHhhcCCCcEEEEEeCCCCc
Q 011964 311 LPYPSLSFDMLHCAR----CGVDWD--QKDG----ILLLEVDRVLKPGGYFVWTSPLTNP 360 (474)
Q Consensus 311 Lpf~d~sFDlVvss~----~l~~~~--~d~~----~~L~ei~RvLKPGG~lvis~~~~~~ 360 (474)
+|-.-+.||+|+++- -.+|+. +|.. .+-....+.|+|||.+++...+...
T Consensus 205 ~P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyAD 264 (324)
T 3trk_A 205 LPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYAD 264 (324)
T ss_dssp CCGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCS
T ss_pred CCCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccc
Confidence 343347899999862 123331 1211 3345677899999999999887765
No 440
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=24.35 E-value=72 Score=34.14 Aligned_cols=70 Identities=17% Similarity=0.213 Sum_probs=42.1
Q ss_pred CCCCCCCeeEEEecc----cccccc--ccH----HHHHHHHHhhcCCCcEEEEEeCCCCchhhhhhHHHHHHHHHHHHHH
Q 011964 311 LPYPSLSFDMLHCAR----CGVDWD--QKD----GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFV 380 (474)
Q Consensus 311 Lpf~d~sFDlVvss~----~l~~~~--~d~----~~~L~ei~RvLKPGG~lvis~~~~~~~~~~~~~e~~~~w~~~~~la 380 (474)
+|- ++.||+|+++- -.+|+. +|. ..+-....+.|+|||.+++...+... +.. -..+..++
T Consensus 216 ~p~-~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyAD----r~s-----E~vv~ala 285 (670)
T 4gua_A 216 FPP-QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYAD----RNS-----EDVVTALA 285 (670)
T ss_dssp CCC-CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCS----HHH-----HHHHHHHH
T ss_pred CCC-CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccc----cch-----HHHHHHHH
Confidence 553 46899999862 223332 121 13345677899999999999987765 222 23445566
Q ss_pred HhhCceEEee
Q 011964 381 ENLCWELVSQ 390 (474)
Q Consensus 381 ~~l~W~~~~~ 390 (474)
.+..+..+.+
T Consensus 286 RkF~~~rv~~ 295 (670)
T 4gua_A 286 RKFVRVSAAR 295 (670)
T ss_dssp HTEEEEEEEC
T ss_pred hheeeeeeeC
Confidence 6555544443
No 441
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=23.79 E-value=1.8e+02 Score=34.30 Aligned_cols=50 Identities=12% Similarity=0.018 Sum_probs=38.2
Q ss_pred CceEEEECCCCchHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEE
Q 011964 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIG 304 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~ 304 (474)
..+++|+-||.|.++.-|...|+. ..+.++|+++.+++.-+.+.....+.
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~-~vv~avEid~~A~~ty~~N~p~~~~~ 900 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVF 900 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSE-EEEEEECCSHHHHHHHHHHCTTSEEE
T ss_pred CceEEecccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhCCCCcEe
Confidence 358999999999999999888752 35788999999887766654433333
No 442
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=23.15 E-value=69 Score=30.50 Aligned_cols=87 Identities=16% Similarity=0.142 Sum_probs=51.0
Q ss_pred ceEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 255 RTILDIGCGY-G-SFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 255 ~~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
.+|.=||+|. | .++..|++.|. .|+.+|.+++.++.+.+.++. .. .+..++ . . .|+|+..- .-..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~---~V~~~dr~~~~~~~~~~~g~~--~~-~~~~~~--~-~-aDvvi~~v---p~~~ 82 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG---GVTVYDIRIEAMTPLAEAGAT--LA-DSVADV--A-A-ADLIHITV---LDDA 82 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT---CEEEECSSTTTSHHHHHTTCE--EC-SSHHHH--T-T-SSEEEECC---SSHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHCCCE--Ec-CCHHHH--H-h-CCEEEEEC---CChH
Confidence 4688888884 3 24555666664 678889988777777665532 11 111111 1 2 68887542 1112
Q ss_pred cHHHHHHHHHhhcCCCcEEEEE
Q 011964 333 KDGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 333 d~~~~L~ei~RvLKPGG~lvis 354 (474)
..+.++.++...++||..++-.
T Consensus 83 ~~~~v~~~l~~~l~~g~ivv~~ 104 (296)
T 3qha_A 83 QVREVVGELAGHAKPGTVIAIH 104 (296)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEC
T ss_pred HHHHHHHHHHHhcCCCCEEEEe
Confidence 2345677888888887766543
No 443
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=22.84 E-value=73 Score=32.48 Aligned_cols=96 Identities=13% Similarity=0.122 Sum_probs=54.1
Q ss_pred CCceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcCCCcEEEeeccc------CCC-CCC--------
Q 011964 253 GVRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASK------QLP-YPS-------- 315 (474)
Q Consensus 253 ~~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~------~Lp-f~d-------- 315 (474)
.+.+|+=+|+|. |..+..++.. | ..|+.+|.++..++.+.+.+.. +...+.. ... |..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D~~~~~l~~~~~~G~~--~~~~~~~~~~d~~~~~~ya~e~s~~~~~ 263 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG---AVVSATDVRPAAKEQVASLGAK--FIAVEDEEFKAAETAGGYAKEMSGEYQV 263 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSSTTHHHHHHHTTCE--ECCCCC-----------------CHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHcCCc--eeecccccccccccccchhhhcchhhhh
Confidence 357899999984 4444444443 4 4788999999888877765532 2111100 000 110
Q ss_pred ----------CCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEEEE
Q 011964 316 ----------LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 316 ----------~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lvis 354 (474)
...|+|+..- +..-...+.-+-+++.+.+|||.+++=.
T Consensus 264 ~~~~~l~e~l~~aDVVI~tv-lipg~~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 264 KQAALVAEHIAKQDIVITTA-LIPGRPAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHHHHHHHTCSEEEECC-CCSSSCCCCCBCHHHHTTSCTTCEEEET
T ss_pred hhHhHHHHHhcCCCEEEECC-cCCCCCCCEEecHHHHhcCCCCCEEEEE
Confidence 3579998652 1121112222346888999999887753
No 444
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=22.33 E-value=3.4e+02 Score=25.78 Aligned_cols=95 Identities=18% Similarity=0.085 Sum_probs=51.7
Q ss_pred ceEEEECCCC--chHHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEE------E--eecc-cCCCCCCCCeeEEEe
Q 011964 255 RTILDIGCGY--GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI------G--SFAS-KQLPYPSLSFDMLHC 323 (474)
Q Consensus 255 ~~VLDIGCGt--G~~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~------~--~~d~-~~Lpf~d~sFDlVvs 323 (474)
.+|+=||+|. +.++..|++.| ..|+.++.++ .+..++.|+...- . .... .+..-....+|+|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTG---HCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTT---CEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 4678888873 23455555555 3667777765 2555555532211 0 0000 001001136899986
Q ss_pred ccccccccccHHHHHHHHHhhcCCCcEEEEEeCCC
Q 011964 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (474)
Q Consensus 324 s~~l~~~~~d~~~~L~ei~RvLKPGG~lvis~~~~ 358 (474)
.--.... ..++.++...++++..++....+.
T Consensus 78 avK~~~~----~~~l~~l~~~l~~~t~Iv~~~nGi 108 (320)
T 3i83_A 78 CIKVVEG----ADRVGLLRDAVAPDTGIVLISNGI 108 (320)
T ss_dssp CCCCCTT----CCHHHHHTTSCCTTCEEEEECSSS
T ss_pred ecCCCCh----HHHHHHHHhhcCCCCEEEEeCCCC
Confidence 5221222 348889999999998777665444
No 445
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=22.19 E-value=3.7e+02 Score=25.02 Aligned_cols=89 Identities=11% Similarity=0.103 Sum_probs=51.1
Q ss_pred ceEEEECCCC--chHHHHhhhcCCceeEEEEecCCHHHHHHHHHc-------------CCC----------cEEEeeccc
Q 011964 255 RTILDIGCGY--GSFGAHLFSKELLTMCIANYEASGSQVQLTLER-------------GLP----------AMIGSFASK 309 (474)
Q Consensus 255 ~~VLDIGCGt--G~~~~~La~~g~~~~~v~giD~s~~~l~~A~er-------------g~~----------~~~~~~d~~ 309 (474)
.+|.=||+|+ ..++..++..|. .|+.+|.+++.++.+.+. ++. +.. ..+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~---~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF---AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 4677788874 223444555563 788899999888776653 111 111 11111
Q ss_pred CCCCCCCCeeEEEeccccccccccHHHHHHHHHhhcCCCcEEE
Q 011964 310 QLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFV 352 (474)
Q Consensus 310 ~Lpf~d~sFDlVvss~~l~~~~~d~~~~L~ei~RvLKPGG~lv 352 (474)
+. + ...|+|+..-. ... .....++.++...++|+..++
T Consensus 81 ~~-~--~~aDlVi~av~-~~~-~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 81 QA-V--KDADLVIEAVP-ESL-DLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp HH-T--TTCSEEEECCC-SCH-HHHHHHHHHHHHHSCTTCEEE
T ss_pred HH-h--ccCCEEEEecc-CcH-HHHHHHHHHHHhhCCCCcEEE
Confidence 10 1 34799986521 111 122467889999999988665
No 446
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=21.28 E-value=89 Score=34.23 Aligned_cols=56 Identities=13% Similarity=-0.003 Sum_probs=41.0
Q ss_pred CCceEEEECCCCchHHHHhhhcCC----ceeEEEEecCCHHHHHHHHHcCCCcEEEeecc
Q 011964 253 GVRTILDIGCGYGSFGAHLFSKEL----LTMCIANYEASGSQVQLTLERGLPAMIGSFAS 308 (474)
Q Consensus 253 ~~~~VLDIGCGtG~~~~~La~~g~----~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~ 308 (474)
+..+|||+=||-|.++.-|.+.|. ....+.++|.++.+++.-+.+.....+.+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di 270 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKA 270 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTTSEEEESCH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCCCceecCcH
Confidence 446899999999999988866541 12457789999999988777765555544443
No 447
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=21.12 E-value=1.8e+02 Score=27.72 Aligned_cols=93 Identities=13% Similarity=0.199 Sum_probs=51.8
Q ss_pred ceEEEECCCC-ch-HHHHhhhcCCceeEEEEecCCHHHHHHHHHc-CCCcE------EEee--cccCCCCCCCCeeEEEe
Q 011964 255 RTILDIGCGY-GS-FGAHLFSKELLTMCIANYEASGSQVQLTLER-GLPAM------IGSF--ASKQLPYPSLSFDMLHC 323 (474)
Q Consensus 255 ~~VLDIGCGt-G~-~~~~La~~g~~~~~v~giD~s~~~l~~A~er-g~~~~------~~~~--d~~~Lpf~d~sFDlVvs 323 (474)
.+|.=||+|. |. ++..|++.| ..|+.+|.+++.++..++. ++... .... ...++.-.-..+|+|+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG---QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 4788899875 32 344455555 3678899998887766665 32100 0000 00010000125898886
Q ss_pred ccccccccccHHHHHHHHHhhcCCCcEEEEE
Q 011964 324 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWT 354 (474)
Q Consensus 324 s~~l~~~~~d~~~~L~ei~RvLKPGG~lvis 354 (474)
.--. .....++.++...+++|..++..
T Consensus 82 ~v~~----~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 82 VVPA----IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CSCG----GGHHHHHHHHGGGCCTTCEEEES
T ss_pred eCCc----hHHHHHHHHHHHhCCCCCEEEEc
Confidence 5221 22356888898999997765544
No 448
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=20.65 E-value=1e+02 Score=28.86 Aligned_cols=87 Identities=13% Similarity=0.100 Sum_probs=48.9
Q ss_pred ceEEEECCCC-ch-HHHHhhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEeccccccccc
Q 011964 255 RTILDIGCGY-GS-FGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 332 (474)
Q Consensus 255 ~~VLDIGCGt-G~-~~~~La~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~~~~ 332 (474)
.+|.=||+|. |. ++..|.+.+. .|+.+|.+++.++...+.++. .. .+..+. + ...|+|+..-. ...
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~~~~~~~~~~g~~--~~-~~~~~~-~--~~~D~vi~~v~---~~~ 73 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY---SLVVSDRNPEAIADVIAAGAE--TA-STAKAI-A--EQCDVIITMLP---NSP 73 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTCE--EC-SSHHHH-H--HHCSEEEECCS---SHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCC---EEEEEeCCHHHHHHHHHCCCe--ec-CCHHHH-H--hCCCEEEEECC---CHH
Confidence 3688899885 33 3444555553 678899999888777665532 11 111110 1 13688876521 111
Q ss_pred cHHHHH---HHHHhhcCCCcEEEE
Q 011964 333 KDGILL---LEVDRVLKPGGYFVW 353 (474)
Q Consensus 333 d~~~~L---~ei~RvLKPGG~lvi 353 (474)
..+.++ .++...++||..++-
T Consensus 74 ~~~~~~~~~~~l~~~l~~~~~vv~ 97 (299)
T 1vpd_A 74 HVKEVALGENGIIEGAKPGTVLID 97 (299)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred HHHHHHhCcchHhhcCCCCCEEEE
Confidence 223455 566777888876543
No 449
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=20.38 E-value=33 Score=34.36 Aligned_cols=43 Identities=12% Similarity=0.128 Sum_probs=28.0
Q ss_pred CCceEEEECCCC-chHHHHhhhc-CCceeEEEEecCCHHHHHHHHHcC
Q 011964 253 GVRTILDIGCGY-GSFGAHLFSK-ELLTMCIANYEASGSQVQLTLERG 298 (474)
Q Consensus 253 ~~~~VLDIGCGt-G~~~~~La~~-g~~~~~v~giD~s~~~l~~A~erg 298 (474)
.+.+|+=+|+|. |..+..++.. | ..|+.+|.++.-.+.+++.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G---a~V~~~d~~~~~~~~~~~~G 215 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG---AVVMATDVRAATKEQVESLG 215 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCSTTHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHcC
Confidence 457899999874 3333334433 4 35888999877666666544
No 450
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=20.36 E-value=2.5e+02 Score=29.32 Aligned_cols=86 Identities=12% Similarity=0.062 Sum_probs=51.4
Q ss_pred CceEEEECCCCchHHHHh----hhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecccccc
Q 011964 254 VRTILDIGCGYGSFGAHL----FSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (474)
Q Consensus 254 ~~~VLDIGCGtG~~~~~L----a~~g~~~~~v~giD~s~~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~~l~~ 329 (474)
.++|+=+|+| ..+..+ ...| ..|+..|.++.....+...+. .+ .+.... -..+|+|+......+
T Consensus 265 GKtVvVtGaG--gIG~aiA~~Laa~G---A~Viv~D~~~~~a~~Aa~~g~--dv--~~lee~---~~~aDvVi~atG~~~ 332 (488)
T 3ond_A 265 GKVAVVAGYG--DVGKGCAAALKQAG---ARVIVTEIDPICALQATMEGL--QV--LTLEDV---VSEADIFVTTTGNKD 332 (488)
T ss_dssp TCEEEEECCS--HHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTTC--EE--CCGGGT---TTTCSEEEECSSCSC
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHhCC--cc--CCHHHH---HHhcCEEEeCCCChh
Confidence 4789999988 344333 3445 478888999877766666553 11 122221 235898886533233
Q ss_pred ccccHHHHHHHHHhhcCCCcEEEEEeCC
Q 011964 330 WDQKDGILLLEVDRVLKPGGYFVWTSPL 357 (474)
Q Consensus 330 ~~~d~~~~L~ei~RvLKPGG~lvis~~~ 357 (474)
... .+..+.+|+|+.++-....
T Consensus 333 vl~------~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 333 IIM------LDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp SBC------HHHHTTSCTTEEEEESSST
T ss_pred hhh------HHHHHhcCCCeEEEEcCCC
Confidence 211 3356788999988766543
No 451
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=20.01 E-value=2.5e+02 Score=26.85 Aligned_cols=88 Identities=16% Similarity=0.065 Sum_probs=49.8
Q ss_pred ceEEEECCCC-c-hHHHHhhhcCCceeEEEEecCCH-------HHHHHHHHcCCCcEEEeecccCCCCCCCCeeEEEecc
Q 011964 255 RTILDIGCGY-G-SFGAHLFSKELLTMCIANYEASG-------SQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCAR 325 (474)
Q Consensus 255 ~~VLDIGCGt-G-~~~~~La~~g~~~~~v~giD~s~-------~~l~~A~erg~~~~~~~~d~~~Lpf~d~sFDlVvss~ 325 (474)
.+|-=||+|. | .++..|++.|. ..|+++|.++ ..++.+.+.+. .. .+..+. . ...|+|+..-
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~--~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~-~s~~e~-~--~~aDvVi~av 95 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNA--ARLAAYDLRFNDPAASGALRARAAELGV---EP-LDDVAG-I--ACADVVLSLV 95 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC--SEEEEECGGGGCTTTHHHHHHHHHHTTC---EE-ESSGGG-G--GGCSEEEECC
T ss_pred CeEEEECccHHHHHHHHHHHHcCC--CeEEEEeCCCccccchHHHHHHHHHCCC---CC-CCHHHH-H--hcCCEEEEec
Confidence 4688888873 2 24444555551 3677888886 45555555554 11 011111 1 2468888652
Q ss_pred ccccccccHHHHHHHHHhhcCCCcEEEEEe
Q 011964 326 CGVDWDQKDGILLLEVDRVLKPGGYFVWTS 355 (474)
Q Consensus 326 ~l~~~~~d~~~~L~ei~RvLKPGG~lvis~ 355 (474)
. - ......+.++...|+||..++-..
T Consensus 96 p---~-~~~~~~~~~i~~~l~~~~ivv~~s 121 (317)
T 4ezb_A 96 V---G-AATKAVAASAAPHLSDEAVFIDLN 121 (317)
T ss_dssp C---G-GGHHHHHHHHGGGCCTTCEEEECC
T ss_pred C---C-HHHHHHHHHHHhhcCCCCEEEECC
Confidence 1 1 222346688888999987665443
Done!