Query 011965
Match_columns 474
No_of_seqs 177 out of 1385
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 07:10:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011965.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011965hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 1E-118 3E-123 898.1 40.1 422 31-473 22-454 (454)
2 PLN02209 serine carboxypeptida 100.0 3E-104 6E-109 804.9 42.8 422 8-469 4-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 2E-103 4E-108 798.8 41.1 403 35-469 19-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 2E-102 5E-107 801.5 31.1 400 43-466 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 1.6E-95 4E-100 750.0 39.9 384 47-469 42-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 1.9E-74 4.2E-79 569.6 31.1 313 126-469 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 6.3E-71 1.4E-75 546.5 21.9 389 41-467 57-491 (498)
8 KOG1283 Serine carboxypeptidas 100.0 7.1E-66 1.5E-70 476.7 14.8 391 54-465 5-412 (414)
9 TIGR03611 RutD pyrimidine util 99.2 1.1E-09 2.3E-14 104.0 15.9 116 68-226 2-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 99.1 6.2E-09 1.3E-13 100.3 20.5 129 53-225 3-132 (288)
11 PHA02857 monoglyceride lipase; 99.0 2.9E-08 6.3E-13 96.3 20.9 124 63-225 9-133 (276)
12 PRK10673 acyl-CoA esterase; Pr 99.0 1.4E-08 3.1E-13 96.9 17.3 104 76-222 11-114 (255)
13 PRK00870 haloalkane dehalogena 99.0 7.8E-08 1.7E-12 94.7 22.9 140 35-223 7-149 (302)
14 TIGR03056 bchO_mg_che_rel puta 99.0 2.6E-08 5.7E-13 96.1 18.5 108 78-226 25-132 (278)
15 PLN02824 hydrolase, alpha/beta 99.0 2E-08 4.4E-13 98.4 17.5 123 56-224 12-137 (294)
16 PRK03204 haloalkane dehalogena 98.9 9.7E-08 2.1E-12 93.4 19.2 58 382-464 227-285 (286)
17 TIGR03343 biphenyl_bphD 2-hydr 98.9 1.6E-07 3.4E-12 91.2 19.8 59 382-465 223-281 (282)
18 PF12697 Abhydrolase_6: Alpha/ 98.9 1.2E-08 2.6E-13 94.2 9.8 104 84-227 1-104 (228)
19 TIGR02427 protocat_pcaD 3-oxoa 98.9 1.2E-07 2.7E-12 88.9 16.9 60 381-465 192-251 (251)
20 PLN02385 hydrolase; alpha/beta 98.8 3.4E-07 7.3E-12 92.2 20.4 128 63-225 70-198 (349)
21 PLN02298 hydrolase, alpha/beta 98.8 4.9E-07 1.1E-11 90.2 21.4 138 52-225 32-170 (330)
22 PRK03592 haloalkane dehalogena 98.8 2.1E-07 4.6E-12 91.2 16.9 115 64-226 16-130 (295)
23 TIGR02240 PHA_depoly_arom poly 98.8 3.2E-07 7E-12 89.0 17.7 117 64-225 11-127 (276)
24 PRK06489 hypothetical protein; 98.7 1.9E-06 4.2E-11 87.1 21.3 59 382-466 292-356 (360)
25 PLN02679 hydrolase, alpha/beta 98.7 1E-06 2.2E-11 89.1 19.2 105 80-224 87-191 (360)
26 PRK10349 carboxylesterase BioH 98.7 6.9E-07 1.5E-11 85.5 16.9 60 381-465 195-254 (256)
27 PLN03084 alpha/beta hydrolase 98.7 1.3E-06 2.9E-11 88.6 18.7 130 50-224 102-232 (383)
28 PLN02652 hydrolase; alpha/beta 98.6 1.6E-06 3.6E-11 88.4 18.4 128 63-225 119-246 (395)
29 TIGR01738 bioH putative pimelo 98.6 2.1E-06 4.6E-11 80.3 16.8 58 382-464 188-245 (245)
30 PLN02578 hydrolase 98.6 5E-06 1.1E-10 83.9 19.3 112 64-223 75-186 (354)
31 KOG4409 Predicted hydrolase/ac 98.6 3E-06 6.6E-11 82.1 16.3 138 49-228 62-199 (365)
32 PLN03087 BODYGUARD 1 domain co 98.5 2.2E-05 4.7E-10 81.7 22.8 133 51-223 175-308 (481)
33 TIGR01249 pro_imino_pep_1 prol 98.5 1.2E-05 2.6E-10 79.3 20.1 126 54-225 6-131 (306)
34 PLN02894 hydrolase, alpha/beta 98.5 4.8E-06 1E-10 85.4 17.5 109 79-224 103-211 (402)
35 PRK14875 acetoin dehydrogenase 98.5 9.1E-06 2E-10 82.2 19.1 103 79-223 129-231 (371)
36 TIGR03695 menH_SHCHC 2-succiny 98.5 2.3E-06 5E-11 80.0 13.1 105 81-224 1-105 (251)
37 PRK10749 lysophospholipase L2; 98.5 1.8E-05 3.9E-10 79.0 20.1 125 64-225 40-167 (330)
38 PRK11126 2-succinyl-6-hydroxy- 98.5 2.3E-06 5E-11 80.9 12.8 100 81-223 2-101 (242)
39 PLN02965 Probable pheophorbida 98.4 1.2E-05 2.6E-10 77.0 16.3 60 381-465 192-251 (255)
40 PRK08775 homoserine O-acetyltr 98.3 6.6E-06 1.4E-10 82.6 13.7 62 382-467 277-339 (343)
41 KOG4178 Soluble epoxide hydrol 98.3 8.3E-05 1.8E-09 71.9 19.9 136 51-228 21-157 (322)
42 PLN02980 2-oxoglutarate decarb 98.3 2E-05 4.3E-10 93.9 17.3 108 77-223 1367-1479(1655)
43 PRK07581 hypothetical protein; 98.3 2.5E-05 5.5E-10 78.2 15.7 59 382-465 275-334 (339)
44 TIGR01607 PST-A Plasmodium sub 98.2 5.1E-05 1.1E-09 75.9 16.6 62 382-466 270-332 (332)
45 COG1506 DAP2 Dipeptidyl aminop 98.2 2.2E-05 4.8E-10 85.0 14.3 122 56-196 367-491 (620)
46 PRK00175 metX homoserine O-ace 98.1 0.00018 3.8E-09 73.4 17.3 64 382-466 309-373 (379)
47 PLN02872 triacylglycerol lipas 98.0 4.7E-05 1E-09 77.6 11.2 61 382-466 325-388 (395)
48 PLN02511 hydrolase 97.9 2.4E-05 5.3E-10 79.9 8.2 136 54-225 73-211 (388)
49 PF00561 Abhydrolase_1: alpha/ 97.9 3.8E-05 8.3E-10 71.4 8.6 56 381-461 174-229 (230)
50 PRK05855 short chain dehydroge 97.9 0.00029 6.3E-09 75.7 16.6 99 64-195 12-111 (582)
51 COG2267 PldB Lysophospholipase 97.9 0.00034 7.3E-09 68.7 15.0 138 51-227 8-145 (298)
52 KOG1454 Predicted hydrolase/ac 97.7 0.00074 1.6E-08 67.1 14.5 60 382-466 264-323 (326)
53 PF10340 DUF2424: Protein of u 97.7 6.1E-05 1.3E-09 74.9 6.6 133 66-228 105-239 (374)
54 PF00326 Peptidase_S9: Prolyl 97.7 0.00017 3.7E-09 67.0 8.4 92 125-229 13-104 (213)
55 TIGR03100 hydr1_PEP hydrolase, 97.5 0.0011 2.5E-08 64.2 12.5 78 127-225 58-135 (274)
56 PRK10985 putative hydrolase; P 97.5 0.0013 2.8E-08 65.5 12.4 46 382-452 255-300 (324)
57 PRK05077 frsA fermentation/res 97.3 0.00099 2.1E-08 68.6 9.3 130 56-225 170-301 (414)
58 PLN02211 methyl indole-3-aceta 97.2 0.0018 3.9E-08 62.8 8.9 107 79-224 16-122 (273)
59 TIGR03101 hydr2_PEP hydrolase, 97.0 0.0056 1.2E-07 59.0 10.9 126 64-228 9-138 (266)
60 PF08386 Abhydrolase_4: TAP-li 96.9 0.0048 1.1E-07 50.3 7.5 66 382-472 34-99 (103)
61 TIGR02821 fghA_ester_D S-formy 96.6 0.031 6.8E-07 54.2 12.4 52 163-226 123-175 (275)
62 TIGR01840 esterase_phb esteras 96.4 0.012 2.6E-07 54.7 8.1 117 78-224 10-130 (212)
63 KOG1515 Arylacetamide deacetyl 96.3 0.042 9.1E-07 54.6 11.7 144 54-227 63-210 (336)
64 PLN02442 S-formylglutathione h 96.3 0.015 3.2E-07 56.8 7.9 47 382-449 217-264 (283)
65 PRK10566 esterase; Provisional 96.2 0.021 4.6E-07 54.1 8.8 62 382-466 186-247 (249)
66 KOG2564 Predicted acetyltransf 96.2 0.015 3.3E-07 55.0 7.1 108 79-221 72-179 (343)
67 COG0596 MhpC Predicted hydrola 96.1 0.036 7.9E-07 51.1 9.5 104 81-225 21-124 (282)
68 KOG1455 Lysophospholipase [Lip 96.0 0.03 6.5E-07 53.8 8.3 129 63-224 36-164 (313)
69 cd00707 Pancreat_lipase_like P 96.0 0.0085 1.8E-07 58.2 4.9 114 78-224 33-147 (275)
70 TIGR00976 /NonD putative hydro 95.9 0.018 3.9E-07 61.7 7.2 130 63-227 5-135 (550)
71 TIGR01392 homoserO_Ac_trn homo 95.5 0.021 4.6E-07 57.4 5.7 63 382-465 288-351 (351)
72 PRK06765 homoserine O-acetyltr 95.3 0.064 1.4E-06 54.8 8.2 65 382-467 323-388 (389)
73 TIGR01838 PHA_synth_I poly(R)- 95.2 0.88 1.9E-05 48.3 16.4 85 127-227 221-305 (532)
74 PRK10115 protease 2; Provision 94.8 0.084 1.8E-06 58.0 7.9 143 56-228 418-563 (686)
75 PF06500 DUF1100: Alpha/beta h 94.6 0.013 2.9E-07 59.2 1.1 81 126-226 218-298 (411)
76 TIGR03230 lipo_lipase lipoprot 94.5 0.27 5.8E-06 50.8 10.2 81 126-223 73-153 (442)
77 COG3509 LpqC Poly(3-hydroxybut 94.3 0.29 6.3E-06 47.1 9.2 125 64-224 44-179 (312)
78 PLN00021 chlorophyllase 94.1 0.14 3.1E-06 50.5 7.1 116 78-226 49-168 (313)
79 PRK10162 acetyl esterase; Prov 93.8 0.14 3E-06 50.8 6.6 65 156-226 133-197 (318)
80 PF00975 Thioesterase: Thioest 93.1 0.37 8E-06 44.9 7.8 103 83-224 2-104 (229)
81 PRK11460 putative hydrolase; P 92.9 0.19 4.2E-06 47.3 5.6 62 382-464 148-209 (232)
82 PF12695 Abhydrolase_5: Alpha/ 92.7 0.18 3.9E-06 42.9 4.7 94 83-223 1-94 (145)
83 PF10230 DUF2305: Uncharacteri 92.6 0.88 1.9E-05 43.9 9.8 119 81-226 2-124 (266)
84 PRK10566 esterase; Provisional 92.4 0.22 4.7E-06 47.1 5.3 109 68-197 14-126 (249)
85 COG3208 GrsT Predicted thioest 92.2 6.8 0.00015 36.9 14.5 59 382-465 176-234 (244)
86 KOG2100 Dipeptidyl aminopeptid 91.9 0.38 8.3E-06 53.3 7.1 136 65-227 508-647 (755)
87 TIGR01392 homoserO_Ac_trn homo 91.7 1.7 3.7E-05 43.5 11.2 129 64-224 15-162 (351)
88 KOG2382 Predicted alpha/beta h 91.2 0.44 9.6E-06 46.5 5.8 60 382-466 253-312 (315)
89 PF02230 Abhydrolase_2: Phosph 90.9 0.4 8.6E-06 44.6 5.2 59 382-465 155-213 (216)
90 cd00312 Esterase_lipase Estera 90.7 0.81 1.8E-05 48.2 7.9 39 157-196 156-194 (493)
91 PLN02211 methyl indole-3-aceta 90.1 0.84 1.8E-05 44.1 6.8 59 382-466 211-269 (273)
92 PF03583 LIP: Secretory lipase 90.0 0.88 1.9E-05 44.5 6.9 68 382-470 219-288 (290)
93 COG0596 MhpC Predicted hydrola 89.5 1.1 2.4E-05 41.0 7.0 61 381-465 220-280 (282)
94 PLN02454 triacylglycerol lipas 88.5 1.3 2.7E-05 45.2 6.8 69 154-226 205-273 (414)
95 PRK11460 putative hydrolase; P 88.4 2.4 5.3E-05 39.8 8.5 37 160-197 86-122 (232)
96 COG0400 Predicted esterase [Ge 88.4 0.76 1.6E-05 42.5 4.8 59 382-466 146-204 (207)
97 PF10503 Esterase_phd: Esteras 88.1 1.4 3.1E-05 41.1 6.5 50 164-224 83-132 (220)
98 PF12695 Abhydrolase_5: Alpha/ 88.0 0.97 2.1E-05 38.3 5.1 44 380-447 102-145 (145)
99 KOG1838 Alpha/beta hydrolase [ 87.6 3 6.4E-05 42.4 8.8 131 55-223 96-235 (409)
100 KOG3975 Uncharacterized conser 87.4 2 4.3E-05 40.4 6.8 117 66-202 14-130 (301)
101 TIGR01836 PHA_synth_III_C poly 86.4 1.6 3.5E-05 43.8 6.4 61 382-466 286-349 (350)
102 PF02129 Peptidase_S15: X-Pro 84.2 0.9 2E-05 43.8 3.2 83 127-228 58-140 (272)
103 PF11144 DUF2920: Protein of u 83.6 2.3 5E-05 43.0 5.8 62 156-228 161-223 (403)
104 PF02230 Abhydrolase_2: Phosph 83.4 0.96 2.1E-05 41.9 3.0 59 157-228 86-144 (216)
105 PRK05371 x-prolyl-dipeptidyl a 83.2 1.4 3.1E-05 49.1 4.6 89 124-226 277-375 (767)
106 PF06057 VirJ: Bacterial virul 83.0 2.8 6E-05 38.0 5.5 64 153-226 46-109 (192)
107 PF01764 Lipase_3: Lipase (cla 82.1 2.5 5.4E-05 35.9 4.9 62 156-224 45-106 (140)
108 PRK06765 homoserine O-acetyltr 81.9 2.4 5.2E-05 43.3 5.4 53 153-223 142-195 (389)
109 cd00741 Lipase Lipase. Lipase 81.1 4.1 8.8E-05 35.4 5.9 44 156-202 9-52 (153)
110 cd00519 Lipase_3 Lipase (class 80.8 3.7 8E-05 38.4 5.9 61 156-225 109-169 (229)
111 PF07859 Abhydrolase_3: alpha/ 80.6 1.2 2.6E-05 40.8 2.4 63 156-226 50-112 (211)
112 PRK10252 entF enterobactin syn 80.2 9.6 0.00021 45.3 10.4 103 81-223 1068-1170(1296)
113 PRK10439 enterobactin/ferric e 80.1 7.7 0.00017 39.9 8.4 35 179-224 289-323 (411)
114 PF05577 Peptidase_S28: Serine 79.8 2.2 4.7E-05 44.2 4.4 71 152-233 87-157 (434)
115 KOG4391 Predicted alpha/beta h 79.4 2 4.4E-05 39.5 3.3 130 56-226 56-186 (300)
116 PF10081 Abhydrolase_9: Alpha/ 78.7 5.2 0.00011 38.5 6.0 38 154-191 85-122 (289)
117 PRK13604 luxD acyl transferase 78.6 4.9 0.00011 39.5 6.0 47 382-451 202-248 (307)
118 PF05728 UPF0227: Uncharacteri 78.1 2.1 4.6E-05 38.9 3.2 52 162-230 46-97 (187)
119 PF07519 Tannase: Tannase and 77.7 4.4 9.5E-05 42.6 5.8 86 371-471 342-431 (474)
120 PF11288 DUF3089: Protein of u 77.7 2.9 6.2E-05 38.5 3.9 43 157-201 76-118 (207)
121 PRK05077 frsA fermentation/res 77.6 6.4 0.00014 40.6 6.9 58 382-467 355-412 (414)
122 PF05990 DUF900: Alpha/beta hy 77.2 3.4 7.3E-05 39.0 4.4 67 156-227 74-140 (233)
123 KOG2183 Prolylcarboxypeptidase 77.0 4.9 0.00011 40.6 5.5 63 126-192 111-181 (492)
124 COG0400 Predicted esterase [Ge 76.8 12 0.00026 34.6 7.8 149 67-243 5-156 (207)
125 PLN02571 triacylglycerol lipas 75.1 8.8 0.00019 39.2 6.9 71 155-226 204-277 (413)
126 TIGR03502 lipase_Pla1_cef extr 74.5 12 0.00027 41.5 8.4 99 80-197 448-574 (792)
127 PF08840 BAAT_C: BAAT / Acyl-C 72.8 5.1 0.00011 37.2 4.4 46 166-223 10-55 (213)
128 smart00824 PKS_TE Thioesterase 71.7 15 0.00032 32.9 7.2 76 126-222 25-100 (212)
129 KOG1552 Predicted alpha/beta h 71.5 14 0.00031 35.0 6.9 106 80-225 59-164 (258)
130 KOG2551 Phospholipase/carboxyh 71.1 11 0.00025 34.8 6.0 58 382-465 163-222 (230)
131 PRK14567 triosephosphate isome 71.0 9.9 0.00021 36.2 5.8 61 155-227 178-238 (253)
132 PRK14566 triosephosphate isome 70.4 9.3 0.0002 36.6 5.5 61 155-227 188-248 (260)
133 PF05677 DUF818: Chlamydia CHL 68.9 14 0.00031 36.6 6.5 58 125-191 170-228 (365)
134 KOG1552 Predicted alpha/beta h 68.7 7.8 0.00017 36.8 4.5 60 382-466 192-251 (258)
135 PF08237 PE-PPE: PE-PPE domain 68.5 18 0.00039 33.9 7.0 87 128-224 4-90 (225)
136 PRK11071 esterase YqiA; Provis 68.5 12 0.00026 33.9 5.8 54 382-465 136-189 (190)
137 KOG4627 Kynurenine formamidase 68.3 3.4 7.3E-05 37.8 1.9 73 137-226 102-174 (270)
138 COG4099 Predicted peptidase [G 66.4 78 0.0017 30.9 10.6 133 62-225 169-305 (387)
139 PF06821 Ser_hydrolase: Serine 66.1 9.1 0.0002 34.2 4.3 43 383-451 115-157 (171)
140 PLN02733 phosphatidylcholine-s 65.2 15 0.00033 38.1 6.3 41 155-198 142-182 (440)
141 COG4425 Predicted membrane pro 63.7 16 0.00035 37.3 5.9 37 154-190 373-409 (588)
142 PRK07868 acyl-CoA synthetase; 61.4 16 0.00035 42.3 6.3 62 382-468 297-362 (994)
143 PF07172 GRP: Glycine rich pro 60.6 8.4 0.00018 30.8 2.7 8 1-8 1-8 (95)
144 KOG3101 Esterase D [General fu 60.1 90 0.002 29.0 9.4 154 51-228 8-180 (283)
145 PLN02753 triacylglycerol lipas 60.1 23 0.0005 37.3 6.4 74 153-226 285-361 (531)
146 PLN02408 phospholipase A1 60.1 23 0.0005 35.6 6.3 46 156-202 179-224 (365)
147 TIGR01836 PHA_synth_III_C poly 59.9 20 0.00044 35.8 6.1 79 127-227 95-174 (350)
148 PF12146 Hydrolase_4: Putative 59.5 53 0.0011 25.0 7.0 78 65-166 2-79 (79)
149 PLN02719 triacylglycerol lipas 59.5 24 0.00053 37.0 6.5 72 155-226 273-347 (518)
150 COG1647 Esterase/lipase [Gener 58.6 34 0.00075 31.8 6.6 62 382-466 181-243 (243)
151 PLN02442 S-formylglutathione h 58.4 17 0.00037 35.2 5.0 57 157-227 125-181 (283)
152 PF11187 DUF2974: Protein of u 58.4 22 0.00048 33.2 5.6 39 160-202 70-108 (224)
153 PLN02429 triosephosphate isome 58.1 21 0.00046 35.1 5.5 61 155-227 238-299 (315)
154 PLN02802 triacylglycerol lipas 57.9 22 0.00048 37.2 5.9 63 156-224 309-371 (509)
155 COG2945 Predicted hydrolase of 56.8 15 0.00032 33.4 3.8 55 137-199 70-124 (210)
156 PRK11071 esterase YqiA; Provis 55.5 12 0.00027 33.8 3.4 92 82-226 2-95 (190)
157 PLN02324 triacylglycerol lipas 55.3 34 0.00075 35.0 6.7 47 155-202 193-239 (415)
158 PLN03082 Iron-sulfur cluster a 54.4 13 0.00028 32.9 3.1 63 79-142 76-144 (163)
159 PF00151 Lipase: Lipase; Inte 53.8 3.2 7E-05 41.3 -0.9 105 78-201 68-173 (331)
160 PRK04940 hypothetical protein; 52.9 20 0.00044 32.2 4.1 38 178-229 60-97 (180)
161 PLN02561 triosephosphate isome 52.5 30 0.00064 33.1 5.4 60 155-226 179-239 (253)
162 COG0657 Aes Esterase/lipase [L 52.5 77 0.0017 30.9 8.7 65 156-228 131-195 (312)
163 PF09292 Neil1-DNA_bind: Endon 51.5 8.7 0.00019 24.6 1.1 11 82-92 25-35 (39)
164 PLN02761 lipase class 3 family 51.1 45 0.00097 35.2 6.8 73 154-226 267-344 (527)
165 COG1073 Hydrolases of the alph 51.0 35 0.00076 32.2 6.0 61 383-466 233-296 (299)
166 cd00311 TIM Triosephosphate is 50.9 38 0.00083 32.1 5.9 60 155-227 175-235 (242)
167 PF03959 FSH1: Serine hydrolas 50.6 15 0.00033 33.9 3.1 49 382-455 161-209 (212)
168 PLN02310 triacylglycerol lipas 50.5 34 0.00074 34.9 5.8 64 156-225 186-250 (405)
169 COG0627 Predicted esterase [Ge 48.8 36 0.00078 33.7 5.6 130 80-227 52-190 (316)
170 PLN00413 triacylglycerol lipas 48.4 21 0.00046 37.1 4.0 39 160-201 269-307 (479)
171 TIGR01911 HesB_rel_seleno HesB 48.4 21 0.00045 28.3 3.1 57 83-140 28-89 (92)
172 PLN02934 triacylglycerol lipas 48.2 45 0.00098 35.0 6.3 41 159-202 305-345 (515)
173 PF01738 DLH: Dienelactone hyd 48.1 56 0.0012 29.9 6.6 64 381-465 144-215 (218)
174 PF05448 AXE1: Acetyl xylan es 47.5 56 0.0012 32.4 6.8 56 382-461 262-318 (320)
175 PTZ00333 triosephosphate isome 47.3 40 0.00086 32.2 5.4 60 155-226 182-242 (255)
176 PF06342 DUF1057: Alpha/beta h 47.3 2.8E+02 0.0061 27.0 12.3 101 78-223 32-136 (297)
177 PLN02847 triacylglycerol lipas 46.8 33 0.00071 36.7 5.1 60 153-221 225-288 (633)
178 PRK00042 tpiA triosephosphate 46.8 51 0.0011 31.4 6.1 60 155-227 179-239 (250)
179 PRK13604 luxD acyl transferase 46.4 54 0.0012 32.3 6.3 125 63-226 18-143 (307)
180 PRK11190 Fe/S biogenesis prote 46.2 31 0.00067 31.4 4.3 63 83-146 25-95 (192)
181 PF08538 DUF1749: Protein of u 45.9 40 0.00087 33.0 5.3 71 153-229 82-153 (303)
182 PF03283 PAE: Pectinacetyleste 45.5 2E+02 0.0043 29.1 10.4 148 65-225 35-198 (361)
183 PF06259 Abhydrolase_8: Alpha/ 44.4 51 0.0011 29.6 5.4 65 125-198 62-129 (177)
184 PLN02162 triacylglycerol lipas 44.0 30 0.00066 35.9 4.3 39 160-201 263-301 (475)
185 KOG3079 Uridylate kinase/adeny 43.7 14 0.0003 33.4 1.5 17 79-95 5-21 (195)
186 KOG4569 Predicted lipase [Lipi 42.8 45 0.00099 33.3 5.3 59 159-224 155-213 (336)
187 PF05057 DUF676: Putative seri 42.7 38 0.00081 31.4 4.5 50 153-203 54-103 (217)
188 PLN03037 lipase class 3 family 42.5 54 0.0012 34.5 5.9 46 157-202 296-342 (525)
189 PRK14565 triosephosphate isome 42.2 48 0.001 31.3 5.1 54 154-227 172-225 (237)
190 KOG1553 Predicted alpha/beta h 42.0 53 0.0011 32.7 5.3 58 148-222 286-343 (517)
191 KOG2182 Hydrolytic enzymes of 40.8 41 0.00088 35.1 4.6 41 152-192 146-186 (514)
192 COG0429 Predicted hydrolase of 40.2 60 0.0013 32.1 5.5 120 65-223 61-185 (345)
193 PF05049 IIGP: Interferon-indu 39.4 20 0.00044 36.2 2.2 59 79-139 32-97 (376)
194 PF08840 BAAT_C: BAAT / Acyl-C 38.5 18 0.00038 33.5 1.5 48 382-448 115-163 (213)
195 COG2272 PnbA Carboxylesterase 36.6 1.8E+02 0.0039 30.5 8.4 33 162-195 165-197 (491)
196 COG3319 Thioesterase domains o 36.5 1E+02 0.0022 29.5 6.4 59 153-225 46-104 (257)
197 PF01083 Cutinase: Cutinase; 36.0 82 0.0018 28.2 5.4 81 128-226 41-125 (179)
198 COG3571 Predicted hydrolase of 35.8 47 0.001 29.4 3.6 29 173-201 84-112 (213)
199 TIGR03341 YhgI_GntY IscR-regul 35.1 62 0.0013 29.4 4.5 64 82-146 23-94 (190)
200 PF00756 Esterase: Putative es 35.0 54 0.0012 30.6 4.4 53 163-227 100-153 (251)
201 COG4757 Predicted alpha/beta h 34.9 89 0.0019 29.5 5.4 64 127-195 58-122 (281)
202 COG2819 Predicted hydrolase of 34.6 3.2E+02 0.0069 26.3 9.2 57 158-226 113-174 (264)
203 PF01555 N6_N4_Mtase: DNA meth 34.2 41 0.0009 30.7 3.4 40 128-171 2-41 (231)
204 PF03403 PAF-AH_p_II: Platelet 34.2 33 0.00071 34.9 2.8 38 179-228 229-266 (379)
205 PRK13962 bifunctional phosphog 33.0 70 0.0015 34.9 5.2 61 155-227 574-635 (645)
206 PRK15492 triosephosphate isome 32.6 1E+02 0.0022 29.6 5.7 60 155-227 188-248 (260)
207 PF00681 Plectin: Plectin repe 32.6 22 0.00048 23.9 0.9 33 221-253 11-43 (45)
208 PF10609 ParA: ParA/MinD ATPas 32.6 28 0.00062 26.8 1.6 12 128-139 2-13 (81)
209 TIGR02011 IscA iron-sulfur clu 32.2 38 0.00083 27.4 2.4 64 81-145 22-91 (105)
210 PRK09502 iscA iron-sulfur clus 32.0 29 0.00062 28.3 1.6 63 82-145 25-93 (107)
211 PF06821 Ser_hydrolase: Serine 31.9 43 0.00094 29.8 2.9 51 164-225 42-92 (171)
212 PF03096 Ndr: Ndr family; Int 31.4 29 0.00064 33.6 1.8 63 382-469 219-281 (283)
213 PF07389 DUF1500: Protein of u 31.2 37 0.00081 26.3 1.9 36 159-202 7-42 (100)
214 PF05448 AXE1: Acetyl xylan es 29.8 85 0.0018 31.1 4.9 138 64-224 66-209 (320)
215 PF12740 Chlorophyllase2: Chlo 29.8 79 0.0017 30.3 4.4 65 153-225 62-132 (259)
216 KOG1516 Carboxylesterase and r 29.6 3.1E+02 0.0067 29.1 9.5 34 162-196 180-213 (545)
217 TIGR00419 tim triosephosphate 29.6 1E+02 0.0023 28.3 5.0 55 155-226 150-204 (205)
218 PRK10115 protease 2; Provision 29.2 97 0.0021 34.3 5.6 65 382-465 605-673 (686)
219 PF10503 Esterase_phd: Esteras 29.0 53 0.0012 30.6 3.1 27 382-408 169-195 (220)
220 PRK09504 sufA iron-sulfur clus 29.0 33 0.00071 28.7 1.5 64 81-145 39-108 (122)
221 PF02450 LCAT: Lecithin:choles 28.8 67 0.0014 32.8 4.0 41 160-200 101-141 (389)
222 PRK00022 lolB outer membrane l 28.4 95 0.0021 28.3 4.7 17 7-23 4-20 (202)
223 PF04446 Thg1: tRNAHis guanyly 28.2 52 0.0011 28.1 2.6 52 128-186 22-73 (135)
224 PF00121 TIM: Triosephosphate 27.9 22 0.00048 33.7 0.3 61 155-227 177-238 (244)
225 PF07819 PGAP1: PGAP1-like pro 27.6 71 0.0015 29.8 3.7 35 156-190 61-97 (225)
226 KOG2382 Predicted alpha/beta h 27.4 1E+02 0.0022 30.4 4.7 90 74-189 45-134 (315)
227 COG0149 TpiA Triosephosphate i 27.0 1.7E+02 0.0036 27.9 6.0 76 128-228 161-239 (251)
228 PF10929 DUF2811: Protein of u 26.9 50 0.0011 23.6 1.9 23 155-177 4-26 (57)
229 PRK06762 hypothetical protein; 26.9 34 0.00074 29.9 1.3 15 82-96 2-18 (166)
230 PF15613 WHIM2: WSTF, HB1, Itc 25.5 1.4E+02 0.003 19.4 3.6 27 66-92 12-38 (38)
231 PF00809 Pterin_bind: Pterin b 25.5 1.1E+02 0.0023 28.3 4.4 39 129-184 165-203 (210)
232 PF08060 NOSIC: NOSIC (NUC001) 25.2 61 0.0013 22.7 2.1 21 156-176 14-35 (53)
233 PF03583 LIP: Secretory lipase 25.1 2E+02 0.0043 28.0 6.4 68 155-228 45-117 (290)
234 PRK05371 x-prolyl-dipeptidyl a 24.6 1.6E+02 0.0035 33.1 6.3 28 382-409 455-482 (767)
235 PF07519 Tannase: Tannase and 24.2 1.3E+02 0.0028 31.7 5.2 53 162-229 103-155 (474)
236 COG3673 Uncharacterized conser 24.2 82 0.0018 31.1 3.4 68 126-199 65-143 (423)
237 COG2945 Predicted hydrolase of 23.8 1.3E+02 0.0028 27.6 4.3 56 382-464 149-204 (210)
238 KOG2984 Predicted hydrolase [G 23.6 33 0.00072 31.5 0.6 58 129-198 74-134 (277)
239 TIGR02821 fghA_ester_D S-formy 23.6 90 0.002 29.9 3.7 51 382-453 211-262 (275)
240 PF14020 DUF4236: Protein of u 22.9 89 0.0019 22.2 2.5 14 129-143 41-54 (55)
241 PF01583 APS_kinase: Adenylyls 22.7 45 0.00098 29.3 1.3 14 81-94 1-14 (156)
242 COG3545 Predicted esterase of 22.7 89 0.0019 28.0 3.1 36 177-223 58-93 (181)
243 KOG4667 Predicted esterase [Li 22.7 1.3E+02 0.0029 28.0 4.2 49 382-455 199-247 (269)
244 TIGR01840 esterase_phb esteras 22.0 65 0.0014 29.4 2.3 27 383-409 169-195 (212)
245 PRK10949 protease 4; Provision 21.9 72 0.0016 34.7 2.9 70 127-221 115-186 (618)
246 KOG1643 Triosephosphate isomer 21.8 1E+02 0.0023 28.2 3.3 86 116-228 149-239 (247)
247 KOG3253 Predicted alpha/beta h 21.0 1.9E+02 0.0041 31.3 5.4 50 376-449 298-347 (784)
248 TIGR01849 PHB_depoly_PhaZ poly 20.9 1.6E+02 0.0035 30.3 5.0 56 163-228 157-212 (406)
249 PF04414 tRNA_deacylase: D-ami 20.7 2.2E+02 0.0047 26.5 5.3 106 82-202 30-152 (213)
250 TIGR01839 PHA_synth_II poly(R) 20.7 1.5E+02 0.0032 31.8 4.8 60 159-227 272-331 (560)
251 PLN02517 phosphatidylcholine-s 20.4 1E+02 0.0022 33.2 3.5 48 177-224 212-269 (642)
252 KOG3724 Negative regulator of 20.4 1.4E+02 0.0031 33.1 4.6 96 79-192 88-196 (973)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-118 Score=898.06 Aligned_cols=422 Identities=47% Similarity=0.898 Sum_probs=382.1
Q ss_pred CccccccccccCCCCCC-CCceeEEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEE
Q 011965 31 TTEADADRVRDLPGQPK-VEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLV 109 (474)
Q Consensus 31 ~~~~~~~~v~~lpg~~~-~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i 109 (474)
...++.++|+.|||++. +++++|||||+|+++.+++||||||||+++|++||||||||||||||||+ |+|.|+|||++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v 100 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRV 100 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEE
Confidence 34557789999999974 89999999999998888999999999999999999999999999999995 99999999999
Q ss_pred cCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEecccccc
Q 011965 110 GGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAG 189 (474)
Q Consensus 110 ~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG 189 (474)
+.+|.+|..||||||+.||||||||||||||||+++..++.+ +|+.+|+|+++||+.||++||||++|||||+||||||
T Consensus 101 ~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~-~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG 179 (454)
T KOG1282|consen 101 KYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT-GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAG 179 (454)
T ss_pred cCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcC-CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccc
Confidence 999889999999999999999999999999999999888876 8999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccccccccccccccccccCHHHHHHHHhhcccCC------CCCc
Q 011965 190 HYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ------SMIR 263 (474)
Q Consensus 190 ~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~q~~~~~~~a~~~gli~~~~~~~~~~~c~~~~------~~~~ 263 (474)
||||+||++|+++|+.. .++.|||||++||||++|+..|..++.+|+|.||+|++++++.+++.|.+.. ....
T Consensus 180 ~YVP~La~~I~~~N~~~-~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~ 258 (454)
T KOG1282|consen 180 HYVPALAQEILKGNKKC-CKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSN 258 (454)
T ss_pred eehHHHHHHHHhccccc-cCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCch
Confidence 99999999999999753 3578999999999999999999999999999999999999999999998742 2336
Q ss_pred hhHHHHHHHHH-HHcCCCCcccCCCcccCCCCCCCCCCccccCCcccccccccCCCCCCCCCCchhHHHhhcCcHHHHHH
Q 011965 264 SNCNDHIRGFV-EAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAEDYVMKFFNREDVQRA 342 (474)
Q Consensus 264 ~~C~~~~~~~~-~~~g~in~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~ylN~~~Vr~a 342 (474)
.+|.+++++.. ...+.++.|+++.+.|..... . . + .......+++|...+.+.|||+++||+|
T Consensus 259 ~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~-~-------~-~-------~~~~~~~~~~c~~~~~~~ylN~~~VrkA 322 (454)
T KOG1282|consen 259 TKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSY-E-------L-K-------KPTDCYGYDPCLSDYAEKYLNRPEVRKA 322 (454)
T ss_pred hHHHHHHHHHHHHHhccCchhhhcchhhccccc-c-------c-c-------ccccccccCCchhhhHHHhcCCHHHHHH
Confidence 79999999988 455789999999998974110 0 0 0 0111245689998777999999999999
Q ss_pred hccCccCCccccccccccc-cccccCCCChHHHHHHHHhcC-CeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeee
Q 011965 343 LHANITKLSYPYTTCSGVI-SKWNDSAETVLPIIQKLLNAG-LRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWF 420 (474)
Q Consensus 343 L~v~~~~~~~~w~~cs~~v-~~~~d~~~~~~~~l~~lL~~~-irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~ 420 (474)
|||+.+..+ +|+.||..| ..|.+...+++|.+..++.++ +|||||+||.|++||+.||++||++|++....+|+||+
T Consensus 323 Lh~~~~~~~-~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~ 401 (454)
T KOG1282|consen 323 LHANKTSIG-KWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWY 401 (454)
T ss_pred hCCCCCCCC-cccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCc
Confidence 999875322 799999999 678899999999999999865 99999999999999999999999999999999999999
Q ss_pred ec-CeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHHHHHcCCCCCCCC
Q 011965 421 HK-HQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAATLPSAR 473 (474)
Q Consensus 421 ~~-~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~~fl~~~~~~~~~ 473 (474)
++ +|++||+++|+ ||||+||+|||||||.|||++|++||++||.|++++.++
T Consensus 402 ~~~~qvaG~~~~Y~-~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~~ 454 (454)
T KOG1282|consen 402 HKGGQVAGYTKTYG-GLTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPSTP 454 (454)
T ss_pred cCCCceeeeEEEec-CEEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCCC
Confidence 95 89999999999 899999999999999999999999999999999999764
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=2.6e-104 Score=804.87 Aligned_cols=422 Identities=30% Similarity=0.559 Sum_probs=356.5
Q ss_pred HHHHHHHHHHHHHhhhcccccccCccccccccccCCCCC-CCCceeEEeeEEecCCCCceEEEEEEeecCCCCCCCceEe
Q 011965 8 LLCFMLCTLLVSAVASRSRVSHQTTEADADRVRDLPGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLW 86 (474)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilW 86 (474)
+|-+|+..|||+.. +.++.++|+.|||++ .+++++||||++|+++.+++||||||||+++|+++|||||
T Consensus 4 ~~~~~~~~~~~~~~----------~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lW 73 (437)
T PLN02209 4 ILKFMLLILLVSSH----------HVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIW 73 (437)
T ss_pred HHHHHHHHHHHhcc----------cCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEE
Confidence 46677777777755 334668899999995 5899999999999977778999999999999999999999
Q ss_pred ecCCCChhhhhhhhhhhcCCeEEcCCC-----CcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHH
Q 011965 87 LNGGPGCSSIAYGAAQELGPFLVGGNG-----SRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDS 161 (474)
Q Consensus 87 lnGGPG~SS~~~g~~~e~GP~~i~~~~-----~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~ 161 (474)
|||||||||| +|+|.|+|||+++.++ .++++|||||++.|||||||||+||||||+.++..+. +++++|+|+
T Consensus 74 lnGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~ 150 (437)
T PLN02209 74 LNGGPGCSCL-SGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKI 150 (437)
T ss_pred ECCCCcHHHh-hhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHH
Confidence 9999999999 7999999999998763 4799999999999999999999999999987665554 566778999
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcccccccccccccccc
Q 011965 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHA 241 (474)
Q Consensus 162 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~q~~~~~~~a~~~g 241 (474)
++||+.||++||+|+++|+||+||||||||||.||++|+++|++. .+++||||||+||||++||..|..++.+|+|.||
T Consensus 151 ~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~-~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~g 229 (437)
T PLN02209 151 HEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYIC-CNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMS 229 (437)
T ss_pred HHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccc-cCCceeeeeEEecCcccChhhhhhhHHHHHhccC
Confidence 999999999999999999999999999999999999999987542 3568999999999999999999999999999999
Q ss_pred ccCHHHHHHHHhhcccC---CCCCchhHHHHHHHHHHHcCCCCcccCCCcccCCCCCCCCCCccccCCcccccccccCCC
Q 011965 242 IISDKLYKDISKECDFG---QSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRL 318 (474)
Q Consensus 242 li~~~~~~~~~~~c~~~---~~~~~~~C~~~~~~~~~~~g~in~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (474)
+|++++++.+++.|... .......|.++++++....+.++.|++....|......
T Consensus 230 lI~~~~~~~~~~~c~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~---------------------- 287 (437)
T PLN02209 230 LISDELYESLKRICKGNYFSVDPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDSNTQ---------------------- 287 (437)
T ss_pred CCCHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHhhcCCccccccccccccccc----------------------
Confidence 99999999999998642 12345789998888766667788887665557421100
Q ss_pred CCCCCCCch---hHHHhhcCcHHHHHHhccCccCCccccccccccccccccCCCChHHHHHHHHhcCCeEEEEecCCCCC
Q 011965 319 PSGYDPCAE---DYVMKFFNREDVQRALHANITKLSYPYTTCSGVISKWNDSAETVLPIIQKLLNAGLRIWVYSGDTDGR 395 (474)
Q Consensus 319 ~~~~~pc~~---~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~cs~~v~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~~ 395 (474)
....+|.. ..+..|||+++||+||||+... ...|..|+..+ .+.+...++++.+..+|.+++|||||+||.|++
T Consensus 288 -~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~~~~~~-~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~i 364 (437)
T PLN02209 288 -HISPDCYYYPYHLVECWANNESVREALHVDKGS-IGEWIRDHRGI-PYKSDIRSSIPYHMNNSINGYRSLIFSGDHDIT 364 (437)
T ss_pred -cCCCCcccccHHHHHHHhCCHHHHHHhCCCCCC-CCCCccccchh-hcccchhhhHHHHHHHHhcCceEEEEECCcccc
Confidence 01124532 3578999999999999998421 23699998654 343333344555555556799999999999999
Q ss_pred CChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHHHHHcCCCC
Q 011965 396 VPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAATL 469 (474)
Q Consensus 396 ~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~~fl~~~~~ 469 (474)
||+.|+++|+++|+|++.++|++|+++++++||+|+|+++|||++|+||||||| +||++|++||++||.|++|
T Consensus 365 cn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 365 MPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred CCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999993499999999999998 7999999999999999865
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1.9e-103 Score=798.81 Aligned_cols=403 Identities=30% Similarity=0.590 Sum_probs=347.8
Q ss_pred cccccccCCCCC-CCCceeEEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCC-
Q 011965 35 DADRVRDLPGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGN- 112 (474)
Q Consensus 35 ~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~- 112 (474)
..+.|++|||++ .+++++||||++|+++.+++||||||||+++|+++||||||||||||||+ +|+|.|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 447799999984 58899999999998766789999999999999999999999999999999 799999999998643
Q ss_pred ----CCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccc
Q 011965 113 ----GSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYA 188 (474)
Q Consensus 113 ----~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYg 188 (474)
+.++++||+||++.|||||||||+||||||+.++..+. +|+++|+++++||+.||++||+|+++||||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 25789999999999999999999999999987765543 566778999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccccccccccccccccccCHHHHHHHHhhcccCC---CCCchh
Q 011965 189 GHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ---SMIRSN 265 (474)
Q Consensus 189 G~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~q~~~~~~~a~~~gli~~~~~~~~~~~c~~~~---~~~~~~ 265 (474)
|+|||.+|++|+++|+.. .+++||||||+||||+++|..|..++.+|+|.||+|++++++.+++.|.... ......
T Consensus 176 G~yvP~la~~i~~~n~~~-~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~ 254 (433)
T PLN03016 176 GMIVPALVQEISQGNYIC-CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQ 254 (433)
T ss_pred ceehHHHHHHHHhhcccc-cCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHH
Confidence 999999999999988642 3578999999999999999999999999999999999999999999997421 234678
Q ss_pred HHHHHHHHHHHcCCCCcccCCCcccCCCCCCCCCCccccCCcccccccccCCCCCCCCCCch---hHHHhhcCcHHHHHH
Q 011965 266 CNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE---DYVMKFFNREDVQRA 342 (474)
Q Consensus 266 C~~~~~~~~~~~g~in~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~ylN~~~Vr~a 342 (474)
|.+++..+....+.+|.||++.+.|... .. ..++|.. ..++.|+|+++||+|
T Consensus 255 C~~~~~~~~~~~~~~n~yni~~~~~~~~-----------------------~~--~~~~c~~~~~~~~~~ylN~~~V~~a 309 (433)
T PLN03016 255 CLKLTEEYHKCTAKINIHHILTPDCDVT-----------------------NV--TSPDCYYYPYHLIECWANDESVREA 309 (433)
T ss_pred HHHHHHHHHHHhcCCChhhccCCccccc-----------------------cc--CCCcccccchHHHHHHhCCHHHHHH
Confidence 9999888777788999999997656310 00 0124542 357899999999999
Q ss_pred hccCccCCccccccccccccccccCCCChHHHHHHHHhcCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeec
Q 011965 343 LHANITKLSYPYTTCSGVISKWNDSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHK 422 (474)
Q Consensus 343 L~v~~~~~~~~w~~cs~~v~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~ 422 (474)
|||+... ..+|+.||..|. +.....++++.+..++.+++|||||+||.|++||+.|+++|+++|+|++.++|++|+++
T Consensus 310 L~v~~~~-~~~w~~cn~~v~-~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~ 387 (433)
T PLN03016 310 LHIEKGS-KGKWARCNRTIP-YNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMIN 387 (433)
T ss_pred hCCCCCC-CCCCccCCcccc-cccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCC
Confidence 9998521 247999998872 33223345555556666799999999999999999999999999999999999999999
Q ss_pred CeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHHHHHcCCCC
Q 011965 423 HQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAATL 469 (474)
Q Consensus 423 ~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~~fl~~~~~ 469 (474)
++++||+|+|+++|||++|++|||||| +||++|++||++||+|+++
T Consensus 388 ~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 388 NQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred CEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 999999999984599999999999998 7999999999999999865
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=2.5e-102 Score=801.47 Aligned_cols=400 Identities=39% Similarity=0.734 Sum_probs=328.8
Q ss_pred CCCC-CCCceeEEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCC-CCcccccC
Q 011965 43 PGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGN-GSRLKFNK 120 (474)
Q Consensus 43 pg~~-~~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~-~~~l~~N~ 120 (474)
||++ .+++++|||||+|+++.+++||||||||+++|+++||||||||||||||| +|+|+|+|||+++.+ ..++++||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 6765 38899999999999777899999999999999999999999999999999 799999999999944 37899999
Q ss_pred cccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHH
Q 011965 121 YSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIH 200 (474)
Q Consensus 121 ~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 200 (474)
+||+++||||||||||||||||+.+...+.. +++++|+++++||+.||++||+|+++|+||+||||||+|||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999988776555 899999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCceeeeeeeEeeccccCccccccccccccccccccCHHHHHHHHhhcccC--CCCCchhHHHHHHHHHHH--
Q 011965 201 ERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFG--QSMIRSNCNDHIRGFVEA-- 276 (474)
Q Consensus 201 ~~n~~~~~~~~inLkGi~igng~~dp~~q~~~~~~~a~~~gli~~~~~~~~~~~c~~~--~~~~~~~C~~~~~~~~~~-- 276 (474)
++|..+ .++.||||||+||||++||..|..++.+|+|.||+|++++++.+.+.|... ......+|.++.+.+...
T Consensus 159 ~~~~~~-~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 237 (415)
T PF00450_consen 159 QQNKKG-DQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYA 237 (415)
T ss_dssp HHTCC---STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCH
T ss_pred hccccc-cccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhcc
Confidence 998653 336899999999999999999999999999999999999999999888643 234568899888877653
Q ss_pred ----cCCCCcccCCCcccCCCCCCCCCCccccCCcccccccccCCCCCCCCCCchhHHHhhcCcHHHHHHhccCccCCcc
Q 011965 277 ----YAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAEDYVMKFFNREDVQRALHANITKLSY 352 (474)
Q Consensus 277 ----~g~in~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~ylN~~~Vr~aL~v~~~~~~~ 352 (474)
.+.+|+||++.++|.... . ........+++....+..|||+++||++|||+.. ...
T Consensus 238 ~~~~~~~~n~Ydi~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~-~~~ 297 (415)
T PF00450_consen 238 ISQCNGGINPYDIRQPCYNPSR-S------------------SYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVD-SNV 297 (415)
T ss_dssp HHHHHTTSETTSTTSEETT-SH-C------------------TTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STT-TSS
T ss_pred cccccCCcceeeeecccccccc-c------------------cccccccccccchhhHHHHhccHHHHHhhCCCcc-cCC
Confidence 479999999987442100 0 0000112234455688999999999999999721 145
Q ss_pred ccccccccc-cc--cccCCCChHHHHHHHHhcCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeee--cCeEee
Q 011965 353 PYTTCSGVI-SK--WNDSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFH--KHQVAG 427 (474)
Q Consensus 353 ~w~~cs~~v-~~--~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~--~~~~~G 427 (474)
+|+.|+..| .. ..+.+.++.+.++.||++++|||||+||+|++||+.|+++||++|+|+++++|++|.. +++++|
T Consensus 298 ~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G 377 (415)
T PF00450_consen 298 NWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAG 377 (415)
T ss_dssp S--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEE
T ss_pred cccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccc
Confidence 899999987 32 3367789999999999999999999999999999999999999999999999999987 899999
Q ss_pred EEEEeccCeEEEEEcCCeeccccCChHHHHHHHHHHHcC
Q 011965 428 WVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSA 466 (474)
Q Consensus 428 ~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~~fl~~ 466 (474)
|+|+++ ||||++|++||||||+|||+++++||++||+|
T Consensus 378 ~~k~~~-~ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 378 YVKQYG-NLTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp EEEEET-TEEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred eeEEec-cEEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 999999 99999999999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.6e-95 Score=749.97 Aligned_cols=384 Identities=29% Similarity=0.566 Sum_probs=332.0
Q ss_pred CCCceeEEeeEEecC-CCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCccccc
Q 011965 47 KVEFKHYAGYVKLRP-NDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK 125 (474)
Q Consensus 47 ~~~~~~~sGyl~v~~-~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~ 125 (474)
+.++++|||||+|++ ..+++||||||||+++|+++||||||||||||||| +|+|.|+|||+|+.++.+++.||+||++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~ 120 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNN 120 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccc
Confidence 456889999999975 44689999999999999999999999999999999 7999999999999987789999999999
Q ss_pred CcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhh
Q 011965 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (474)
Q Consensus 126 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (474)
.+||||||||+||||||+... ++.. +++++|+|+++||+.|+++||+++++|+||+||||||+|+|.+|.+|+++|+.
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~-~~~~-~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~ 198 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA-DYDH-NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKK 198 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC-CCCC-ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccc
Confidence 999999999999999998654 3443 77899999999999999999999999999999999999999999999999865
Q ss_pred cCCCceeeeeeeEeeccccCcccccccccccccc-------ccccCHHHHHHHHh---hc-------ccCCCCCchhHHH
Q 011965 206 AGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWS-------HAIISDKLYKDISK---EC-------DFGQSMIRSNCND 268 (474)
Q Consensus 206 ~~~~~~inLkGi~igng~~dp~~q~~~~~~~a~~-------~gli~~~~~~~~~~---~c-------~~~~~~~~~~C~~ 268 (474)
+ .+.+||||||+||||++||..|..++.+|+|+ +|+|++++++++.+ .| ..........|..
T Consensus 199 ~-~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~ 277 (462)
T PTZ00472 199 G-DGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSV 277 (462)
T ss_pred c-CCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHH
Confidence 3 34789999999999999999999999999985 58999998887754 23 3211112345654
Q ss_pred HHHHHHHH-----cCCCCcccCCCcccCCCCCCCCCCccccCCcccccccccCCCCCCCCCCch-hHHHhhcCcHHHHHH
Q 011965 269 HIRGFVEA-----YAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE-DYVMKFFNREDVQRA 342 (474)
Q Consensus 269 ~~~~~~~~-----~g~in~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~-~~~~~ylN~~~Vr~a 342 (474)
+...|... .+++|+||+|.+ |.. ++|.+ ..+..|||+++||+|
T Consensus 278 a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~------------------------------~~c~~~~~~~~yLN~~~Vq~A 326 (462)
T PTZ00472 278 ARALCNEYIAVYSATGLNNYDIRKP-CIG------------------------------PLCYNMDNTIAFMNREDVQSS 326 (462)
T ss_pred HHHHHHHHHHHHHhcCCChhheecc-CCC------------------------------CCccCHHHHHHHhCCHHHHHH
Confidence 44333221 257899999976 631 14543 468899999999999
Q ss_pred hccCccCCccccccccccc-cccc-cCCCChHHHHHHHHhcCCeEEEEecCCCCCCChhHHHHHHHHcCCCCcc-----c
Q 011965 343 LHANITKLSYPYTTCSGVI-SKWN-DSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKE-----E 415 (474)
Q Consensus 343 L~v~~~~~~~~w~~cs~~v-~~~~-d~~~~~~~~l~~lL~~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~-----~ 415 (474)
|||+. .+|+.|+..| ..+. |.+.++.+.++.||++++|||||+||.|++||+.|+++|+++|+|++++ +
T Consensus 327 L~v~~----~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~ 402 (462)
T PTZ00472 327 LGVKP----ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAP 402 (462)
T ss_pred hCCCC----CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcC
Confidence 99984 4799999998 5555 6777888999999999999999999999999999999999999999976 5
Q ss_pred eeee-eecCeEeeEEEEecc----CeEEEEEcCCeeccccCChHHHHHHHHHHHcCCCC
Q 011965 416 WRAW-FHKHQVAGWVETYEK----GLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAATL 469 (474)
Q Consensus 416 ~~~w-~~~~~~~G~~k~~~~----nLtf~~V~~AGHmvP~dqP~~a~~~i~~fl~~~~~ 469 (474)
|++| +++++++||+|+++. ||+|++|++||||||.|||+++++||++|+.|+++
T Consensus 403 ~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 403 DVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred ccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 5899 568899999999962 89999999999999999999999999999999876
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.9e-74 Score=569.64 Aligned_cols=313 Identities=28% Similarity=0.555 Sum_probs=264.5
Q ss_pred CcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhh
Q 011965 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (474)
Q Consensus 126 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (474)
+|||||||||+||||||+.++..+. +++++|+|++.||+.||++||+|+++||||+||||||||||.||++|+++|..
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 4899999999999999987665554 56677799999999999999999999999999999999999999999998864
Q ss_pred cCCCceeeeeeeEeeccccCccccccccccccccccccCHHHHHHHHhhcccCC---CCCchhHHHHHHHHHHHcCCCCc
Q 011965 206 AGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ---SMIRSNCNDHIRGFVEAYAEIDI 282 (474)
Q Consensus 206 ~~~~~~inLkGi~igng~~dp~~q~~~~~~~a~~~gli~~~~~~~~~~~c~~~~---~~~~~~C~~~~~~~~~~~g~in~ 282 (474)
. ++++||||||+|||||++|..|..++.+|+|.||+|++++++.+++.|.... ......|.+++..+....+.+|.
T Consensus 79 ~-~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 157 (319)
T PLN02213 79 C-CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINI 157 (319)
T ss_pred c-cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCH
Confidence 3 4568999999999999999999999999999999999999999999886321 23457899988887777788999
Q ss_pred ccCCCcccCCCCCCCCCCccccCCcccccccccCCCCCCCCCCch---hHHHhhcCcHHHHHHhccCccCCccccccccc
Q 011965 283 YSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE---DYVMKFFNREDVQRALHANITKLSYPYTTCSG 359 (474)
Q Consensus 283 ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~cs~ 359 (474)
||++.+.|... .. ..++|.. ..+..|||+++||+||||+... ..+|+.||.
T Consensus 158 ~~~~~~~~~~~-----------------------~~--~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~ 211 (319)
T PLN02213 158 HHILTPDCDVT-----------------------NV--TSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNR 211 (319)
T ss_pred hhcccCcccCc-----------------------cC--CCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCc
Confidence 99986656310 00 0123542 3578999999999999997421 247999998
Q ss_pred cccccccCCCChHHHHHHHHhcCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEE
Q 011965 360 VISKWNDSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLV 439 (474)
Q Consensus 360 ~v~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~ 439 (474)
.|. +.....+.++.+..+|..++|||||+||.|++||+.|+++|+++|+|++.++|++|+.+++++||+|+|+++|||+
T Consensus 212 ~v~-~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~ 290 (319)
T PLN02213 212 TIP-YNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFA 290 (319)
T ss_pred ccc-cccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEE
Confidence 873 3322334555555566678999999999999999999999999999999999999999999999999998459999
Q ss_pred EEcCCeeccccCChHHHHHHHHHHHcCCCC
Q 011965 440 TVRGAGHQVPAFAPAQSLSLFTKFLSAATL 469 (474)
Q Consensus 440 ~V~~AGHmvP~dqP~~a~~~i~~fl~~~~~ 469 (474)
+|+||||||| +||+++++||++||+++++
T Consensus 291 ~V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 291 TIKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred EEcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 9999999998 7999999999999999764
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-71 Score=546.50 Aligned_cols=389 Identities=26% Similarity=0.437 Sum_probs=309.6
Q ss_pred cCCCCCCCCceeEEeeEEecCCCC-----ceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCc
Q 011965 41 DLPGQPKVEFKHYAGYVKLRPNDH-----KALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSR 115 (474)
Q Consensus 41 ~lpg~~~~~~~~~sGyl~v~~~~~-----~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~ 115 (474)
.++|. .+.++.++|.++|.+.++ ..+|||+||++++|.++|+||||||||||||+ +|+|+|+||+||+.+...
T Consensus 57 ~l~~~-~~~~~~~~G~lpv~~~~g~~d~ed~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P 134 (498)
T COG2939 57 RLRGR-TLSYPATAGILPVRDYTGYPDAEDFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSP 134 (498)
T ss_pred eecCc-cCCcchhccccchhhccCCcccceeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCC
Confidence 45554 355667777777765433 24999999999999999999999999999999 799999999999988422
Q ss_pred cc-ccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCC--CeEEeccccccccH
Q 011965 116 LK-FNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSH--DFYIAGESYAGHYV 192 (474)
Q Consensus 116 l~-~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yv 192 (474)
.. +||+||++++||||||||+|||||++..+ +... +-..+.+|++.|++.|++.||++.+. |+||+||||||+|+
T Consensus 135 ~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~-e~~~-d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yi 212 (498)
T COG2939 135 SYPDNPGSWLDFADLVFIDQPVGTGFSRALGD-EKKK-DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYI 212 (498)
T ss_pred CCCCCccccccCCceEEEecCcccCccccccc-cccc-chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhh
Confidence 22 69999999999999999999999998322 2232 56778899999999999999999888 99999999999999
Q ss_pred HHHHHHHHHHhhhcCCCceeeeeeeEeecc-ccCcccccccccccccc----ccccCHHHHHHHHhhcccCC--------
Q 011965 193 PQLAELIHERNIRAGKDSFINLKGFMIGNA-VINDPTDTKGLVDYAWS----HAIISDKLYKDISKECDFGQ-------- 259 (474)
Q Consensus 193 P~lA~~i~~~n~~~~~~~~inLkGi~igng-~~dp~~q~~~~~~~a~~----~gli~~~~~~~~~~~c~~~~-------- 259 (474)
|.||++|+++|.. .+-.+||++++|||| +++|..|+.+|..+|+. ++.++.+.++++++.|+...
T Consensus 213 p~~A~~L~~~~~~--~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~ 290 (498)
T COG2939 213 PVFAHELLEDNIA--LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGC 290 (498)
T ss_pred HHHHHHHHHhccc--cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCC
Confidence 9999999998632 345799999999999 99999999999998874 45667777888888776421
Q ss_pred --CCCchhHHHHHHHHHHHc------CC---CCcccCCCcccCCCCCCCCCCccccCCcccccccccCCCCCCCCCCch-
Q 011965 260 --SMIRSNCNDHIRGFVEAY------AE---IDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE- 327 (474)
Q Consensus 260 --~~~~~~C~~~~~~~~~~~------g~---in~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~- 327 (474)
......|..+...+.... .+ .|.|+++.. |... +.. .-|++
T Consensus 291 ~~~~~~~~c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~------------g~~--------------~~~y~~ 343 (498)
T COG2939 291 YDSGSLQPCENASAYLTGLMREYVGRAGGRLLNVYDIREE-CRDP------------GLG--------------GSCYDT 343 (498)
T ss_pred CCchhhhHHHHHHHHHHhcchhhhccccccccccccchhh-cCCC------------Ccc--------------cccccc
Confidence 122346766655554321 23 789999875 6421 000 02332
Q ss_pred -hHHHhhcCcHHHHHHhccCccCCccccccccccc-cccc----cCCCChHHHHHHHHhcCCeEEEEecCCCCCCChhHH
Q 011965 328 -DYVMKFFNREDVQRALHANITKLSYPYTTCSGVI-SKWN----DSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTST 401 (474)
Q Consensus 328 -~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~cs~~v-~~~~----d~~~~~~~~l~~lL~~~irVLiy~Gd~D~~~~~~Gt 401 (474)
.....|+|.+.+++.+.... ..|..|+.++ ..|. +.+......+..++.+++.+++|.|+.|.+|++.|+
T Consensus 344 ~~~~ld~~~~~~~~~~~~~~~----d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~ 419 (498)
T COG2939 344 LSTSLDYFNFDPEQEVNDPEV----DNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGN 419 (498)
T ss_pred eeeccccccccchhccccccc----cchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhh
Confidence 24567888777788777654 3799999887 4552 455667778888888999999999999999999999
Q ss_pred HHHHHHcCCCCcccee-----eeee--cCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHHHHHcCC
Q 011965 402 RYSINKMGLKIKEEWR-----AWFH--KHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAA 467 (474)
Q Consensus 402 ~~~i~~l~w~~~~~~~-----~w~~--~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~~fl~~~ 467 (474)
+.|..+|+|.+...|. +|.. ..+..|-.++++ |++|+.++.||||||.|+|+.++.|++.|+.+.
T Consensus 420 ~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~-n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 420 MALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYR-NLTFLRIYEAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred cccCCcceEeeecchhhhcCCCcccccchhhcccccccC-CceEEEEecCcceeecCChHHHHHHHHHHHhhc
Confidence 9999999999998663 3433 567788888888 999999999999999999999999999999884
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.1e-66 Score=476.65 Aligned_cols=391 Identities=25% Similarity=0.411 Sum_probs=310.7
Q ss_pred EeeEEecCCCCceEEEEEEeecCC-CCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEE
Q 011965 54 AGYVKLRPNDHKALFYWFFEAQKG-VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFL 132 (474)
Q Consensus 54 sGyl~v~~~~~~~lFy~~~es~~~-~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfi 132 (474)
-||++|++ ++++|+|+|.+..+ ...+|+.|||+||||+||.++|+|.|+||+..+ +.+|+++|.+.|||+||
T Consensus 5 wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllfv 77 (414)
T KOG1283|consen 5 WGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLFV 77 (414)
T ss_pred ccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEEe
Confidence 58999984 78999999988644 488999999999999999999999999999876 56899999999999999
Q ss_pred eCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCcee
Q 011965 133 EAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFI 212 (474)
Q Consensus 133 DqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~i 212 (474)
|.|||+||||.+..+.|.+ +.+++|.|+.+.|+.||+.||+|+.+||||+-|||||+..+.+|..+.+..++ .+.+.
T Consensus 78 DnPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~--G~i~~ 154 (414)
T KOG1283|consen 78 DNPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKR--GEIKL 154 (414)
T ss_pred cCCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhc--Cceee
Confidence 9999999999998888887 89999999999999999999999999999999999999999999999999876 46889
Q ss_pred eeeeeEeeccccCccccccccccccccccccCHHHHHHHHh---hcccC--C---CCCchhHHHHHHHHHHHcCCCCccc
Q 011965 213 NLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISK---ECDFG--Q---SMIRSNCNDHIRGFVEAYAEIDIYS 284 (474)
Q Consensus 213 nLkGi~igng~~dp~~q~~~~~~~a~~~gli~~~~~~~~~~---~c~~~--~---~~~~~~C~~~~~~~~~~~g~in~yd 284 (474)
|+.|++||+.||+|..-..+..+|++..+++|+...+...+ .|.-. . ..++......-+-+...+..++.||
T Consensus 155 nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYN 234 (414)
T KOG1283|consen 155 NFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYN 234 (414)
T ss_pred cceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceee
Confidence 99999999999999999999999999999999887665433 23211 0 0111111111222334455899999
Q ss_pred CCCcccCCCCCCCCCCccccCCcccccccccCCCCCCCC-CCchhHHHhhcCcHHHHHHhccCccCCccccccccccc-c
Q 011965 285 IYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYD-PCAEDYVMKFFNREDVQRALHANITKLSYPYTTCSGVI-S 362 (474)
Q Consensus 285 i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pc~~~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~cs~~v-~ 362 (474)
|..+.-.+..+.+. ++.. +.+..+ +++..... +-..+.+..++|-+ ||++|++.++ ...|-.-+.+| .
T Consensus 235 il~~t~~d~~~~ss-~~~~-~~~~~~-----rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~--~~~wGgqsg~vFt 304 (414)
T KOG1283|consen 235 ILTKTLGDQYSLSS-RAAM-TPEEVM-----RRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPG--GVKWGGQSGDVFT 304 (414)
T ss_pred eeccCCCcchhhhh-hhhc-chHHHH-----HHHHhccCcchhHHHHHHHhccc-ccccccccCC--CCcccCcCCchHH
Confidence 98864332211110 0000 111111 00100111 11124578888864 8999999875 46898888777 3
Q ss_pred ccc-cCCCChHHHHHHHHhcCCeEEEEecCCCCCCChhHHHHHHHHcCCCCcccee--ee---eecCeEeeEEEEeccCe
Q 011965 363 KWN-DSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWR--AW---FHKHQVAGWVETYEKGL 436 (474)
Q Consensus 363 ~~~-d~~~~~~~~l~~lL~~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~--~w---~~~~~~~G~~k~~~~nL 436 (474)
... +.+.+++..+.+||+.|++|.||+|++|.||++.|+++|++.|.|+....+. +| +++...+||.|.|. ||
T Consensus 305 ~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyk-nl 383 (414)
T KOG1283|consen 305 KLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYK-NL 383 (414)
T ss_pred HhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhc-cc
Confidence 333 8899999999999999999999999999999999999999999999988653 34 34667899999999 99
Q ss_pred EEEEEcCCeeccccCChHHHHHHHHHHHc
Q 011965 437 TLVTVRGAGHQVPAFAPAQSLSLFTKFLS 465 (474)
Q Consensus 437 tf~~V~~AGHmvP~dqP~~a~~~i~~fl~ 465 (474)
.|..|..||||||.|+|+.|.+|++-+.+
T Consensus 384 ~f~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 384 SFFWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred eeEEeecccCcccCCCHHHHhhheeeccc
Confidence 99999999999999999999999986643
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.15 E-value=1.1e-09 Score=104.02 Aligned_cols=116 Identities=20% Similarity=0.195 Sum_probs=78.9
Q ss_pred EEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCC
Q 011965 68 FYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSE 147 (474)
Q Consensus 68 Fy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~ 147 (474)
+|..+.. ..++.|+||++.|.+|++.. |..+.+ .+ .+..+++.+|.| |.|.|......
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~-G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLD-----------VL-------TQRFHVVTYDHR-GTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHH-----------HH-------HhccEEEEEcCC-CCCCCCCCCcc
Confidence 4554432 23468999999999888777 654432 11 134699999977 99999754333
Q ss_pred CCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 148 DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 148 ~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
.+ +.++.++++.+++... ...+++|+|+|+||..+..+|.+.-+ .++++++.+++..+
T Consensus 60 ~~---~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~-----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 GY---SIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYPE-----------RLLSLVLINAWSRP 117 (257)
T ss_pred cC---CHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHChH-----------HhHHheeecCCCCC
Confidence 32 5566677777766542 23579999999999988888864322 27888888876554
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.13 E-value=6.2e-09 Score=100.30 Aligned_cols=129 Identities=22% Similarity=0.306 Sum_probs=80.6
Q ss_pred EEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEE
Q 011965 53 YAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFL 132 (474)
Q Consensus 53 ~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfi 132 (474)
..++++++ +..+.|.-+. .+...|.||++.||||+++..+..+.+. +.. +..+++.+
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~-----------l~~------~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL-----------LKE------EGREVIMY 59 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH-----------HHh------cCCEEEEE
Confidence 34566664 3344444332 2334678899999999987623333221 111 14789999
Q ss_pred eCCCCcCcCcccCCCC-CccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCce
Q 011965 133 EAPVGVGFSYTNNSED-LHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSF 211 (474)
Q Consensus 133 DqPvGtGfS~~~~~~~-~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~ 211 (474)
|.| |.|.|....... .. +-++.++++..++... ..++++|.|+|+||..+..+|..- +
T Consensus 60 d~~-G~G~s~~~~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~liG~S~Gg~ia~~~a~~~-----------p 118 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDELW--TIDYFVDELEEVREKL-------GLDKFYLLGHSWGGMLAQEYALKY-----------G 118 (288)
T ss_pred cCC-CCCCCCCCCcccccc--cHHHHHHHHHHHHHHc-------CCCcEEEEEeehHHHHHHHHHHhC-----------c
Confidence 977 999987533222 11 4566666665554432 234699999999999888887532 2
Q ss_pred eeeeeeEeeccccC
Q 011965 212 INLKGFMIGNAVIN 225 (474)
Q Consensus 212 inLkGi~igng~~d 225 (474)
..++++++.++...
T Consensus 119 ~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 119 QHLKGLIISSMLDS 132 (288)
T ss_pred cccceeeEeccccc
Confidence 34789998887653
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.04 E-value=2.9e-08 Score=96.27 Aligned_cols=124 Identities=15% Similarity=0.160 Sum_probs=83.8
Q ss_pred CCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCccccc-CcceEEEeCCCCcCcC
Q 011965 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGFS 141 (474)
Q Consensus 63 ~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~-~anllfiDqPvGtGfS 141 (474)
.|..|+|..|+.. +..+|+||.+-|..++|.. |-.+.+. +.+ -..++-+|.| |.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~~------------------l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAEN------------------ISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHHH------------------HHhCCCEEEEccCC-CCCCC
Confidence 4678999888764 3456999999999877777 6544431 112 3579999966 99999
Q ss_pred cccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeec
Q 011965 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (474)
Q Consensus 142 ~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~ign 221 (474)
..... ... +-....+|+.+++..+.++++ ..|++|+|+|.||.-+..+|.+ . +-.++|+++.+
T Consensus 67 ~~~~~-~~~--~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~---~--------p~~i~~lil~~ 129 (276)
T PHA02857 67 NGEKM-MID--DFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYK---N--------PNLFTAMILMS 129 (276)
T ss_pred CCccC-CcC--CHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHh---C--------ccccceEEEec
Confidence 64321 111 334456777777766555443 4689999999999766555532 1 12489999999
Q ss_pred cccC
Q 011965 222 AVIN 225 (474)
Q Consensus 222 g~~d 225 (474)
|.++
T Consensus 130 p~~~ 133 (276)
T PHA02857 130 PLVN 133 (276)
T ss_pred cccc
Confidence 8765
No 12
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.02 E-value=1.4e-08 Score=96.93 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=76.5
Q ss_pred CCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChH
Q 011965 76 KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQ 155 (474)
Q Consensus 76 ~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~ 155 (474)
+++.+.|.||++.|.+|.+.. |..+.+. + .+..+++.+|.| |-|.|.... .+ +-+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~~-----------l-------~~~~~vi~~D~~-G~G~s~~~~--~~---~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLARD-----------L-------VNDHDIIQVDMR-NHGLSPRDP--VM---NYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHHH-----------H-------hhCCeEEEECCC-CCCCCCCCC--CC---CHH
Confidence 456778999999999999888 7655431 2 234699999977 999886432 22 556
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecc
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNA 222 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng 222 (474)
+.++|+.++|..+ .-.+++|.|+|.||..+..+|.+--+ .++++++.++
T Consensus 66 ~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~-----------~v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD-----------RIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh-----------hcceEEEEec
Confidence 7788888888653 23479999999999998888865322 2888888764
No 13
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.01 E-value=7.8e-08 Score=94.67 Aligned_cols=140 Identities=19% Similarity=0.210 Sum_probs=89.9
Q ss_pred cccccccCCCCCCCCceeEEeeEEecCCCC--ceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCC
Q 011965 35 DADRVRDLPGQPKVEFKHYAGYVKLRPNDH--KALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGN 112 (474)
Q Consensus 35 ~~~~v~~lpg~~~~~~~~~sGyl~v~~~~~--~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~ 112 (474)
++.++.+||.++ ..-.|+.++...| ..++|.-. .++ +.|.||.+.|.|+.+.. |..+.+
T Consensus 7 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~y~~~---G~~-~~~~lvliHG~~~~~~~-w~~~~~--------- 67 (302)
T PRK00870 7 PDSRFENLPDYP-----FAPHYVDVDDGDGGPLRMHYVDE---GPA-DGPPVLLLHGEPSWSYL-YRKMIP--------- 67 (302)
T ss_pred CcccccCCcCCC-----CCceeEeecCCCCceEEEEEEec---CCC-CCCEEEEECCCCCchhh-HHHHHH---------
Confidence 455677888553 2456788875333 35776632 233 46789999999888888 754432
Q ss_pred CCcccccCcccccCcceEEEeCCCCcCcCcccCC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEecccccccc
Q 011965 113 GSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHY 191 (474)
Q Consensus 113 ~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~-~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 191 (474)
.|.. +..+++.+|.| |.|.|..... ..+ +-++.++++.++|.. . ...+++|.|+|+||..
T Consensus 68 --~L~~------~gy~vi~~Dl~-G~G~S~~~~~~~~~---~~~~~a~~l~~~l~~----l---~~~~v~lvGhS~Gg~i 128 (302)
T PRK00870 68 --ILAA------AGHRVIAPDLI-GFGRSDKPTRREDY---TYARHVEWMRSWFEQ----L---DLTDVTLVCQDWGGLI 128 (302)
T ss_pred --HHHh------CCCEEEEECCC-CCCCCCCCCCcccC---CHHHHHHHHHHHHHH----c---CCCCEEEEEEChHHHH
Confidence 1211 24689999966 9999953221 122 445566666655543 2 2458999999999998
Q ss_pred HHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 192 VPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 192 vP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
+-.+|.+-- -.++++++.++.
T Consensus 129 a~~~a~~~p-----------~~v~~lvl~~~~ 149 (302)
T PRK00870 129 GLRLAAEHP-----------DRFARLVVANTG 149 (302)
T ss_pred HHHHHHhCh-----------hheeEEEEeCCC
Confidence 877775321 128888888764
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.00 E-value=2.6e-08 Score=96.06 Aligned_cols=108 Identities=18% Similarity=0.100 Sum_probs=73.8
Q ss_pred CCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHH
Q 011965 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT 157 (474)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~ 157 (474)
+.+.|+||++.|.+|.+.. |..+.+ .+. +..+++.+|.| |-|.|.......+ +-+..
T Consensus 25 ~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l~-------~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~ 81 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHS-WRDLMP-----------PLA-------RSFRVVAPDLP-GHGFTRAPFRFRF---TLPSM 81 (278)
T ss_pred CCCCCeEEEEcCCCCCHHH-HHHHHH-----------HHh-------hCcEEEeecCC-CCCCCCCccccCC---CHHHH
Confidence 3456899999999888777 654332 121 23689999966 9999965433222 55667
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 158 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
++++.++++.+ ..++++|.|+|+||..+..+|.+. +-.++++++.++...+
T Consensus 82 ~~~l~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 82 AEDLSALCAAE-------GLSPDGVIGHSAGAAIALRLALDG-----------PVTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHHHHc-------CCCCceEEEECccHHHHHHHHHhC-----------CcccceEEEEcCcccc
Confidence 77777766542 235789999999998777666432 1337899999887654
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.99 E-value=2e-08 Score=98.36 Aligned_cols=123 Identities=17% Similarity=0.160 Sum_probs=82.8
Q ss_pred eEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCC
Q 011965 56 YVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAP 135 (474)
Q Consensus 56 yl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqP 135 (474)
|++++ +.+++|. +. .+ ..|.||.+.|.+++|.+ |-.+.+. | .+..+++.+|.|
T Consensus 12 ~~~~~---~~~i~y~--~~-G~--~~~~vlllHG~~~~~~~-w~~~~~~-----------L-------~~~~~vi~~Dlp 64 (294)
T PLN02824 12 TWRWK---GYNIRYQ--RA-GT--SGPALVLVHGFGGNADH-WRKNTPV-----------L-------AKSHRVYAIDLL 64 (294)
T ss_pred eEEEc---CeEEEEE--Ec-CC--CCCeEEEECCCCCChhH-HHHHHHH-----------H-------HhCCeEEEEcCC
Confidence 56664 3456653 22 22 23789999999999998 7765541 2 234589999977
Q ss_pred CCcCcCcccCCCCCc---cCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCcee
Q 011965 136 VGVGFSYTNNSEDLH---KLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFI 212 (474)
Q Consensus 136 vGtGfS~~~~~~~~~---~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~i 212 (474)
|.|.|...+..... .++-++.|+++.++|...- ..+++|.|+|.||..+-.+|.+--+
T Consensus 65 -G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~-------~~~~~lvGhS~Gg~va~~~a~~~p~----------- 125 (294)
T PLN02824 65 -GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV-------GDPAFVICNSVGGVVGLQAAVDAPE----------- 125 (294)
T ss_pred -CCCCCCCCccccccccccCCHHHHHHHHHHHHHHhc-------CCCeEEEEeCHHHHHHHHHHHhChh-----------
Confidence 99999754322100 1155667777777776542 3589999999999988777754322
Q ss_pred eeeeeEeecccc
Q 011965 213 NLKGFMIGNAVI 224 (474)
Q Consensus 213 nLkGi~igng~~ 224 (474)
.++++++.|+..
T Consensus 126 ~v~~lili~~~~ 137 (294)
T PLN02824 126 LVRGVMLINISL 137 (294)
T ss_pred heeEEEEECCCc
Confidence 289999999864
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.92 E-value=9.7e-08 Score=93.38 Aligned_cols=58 Identities=14% Similarity=0.036 Sum_probs=49.6
Q ss_pred CCeEEEEecCCCCCCChhHH-HHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTST-RYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt-~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i 460 (474)
..+|||..|..|.+++.... +.+.+.+. +.++.+|.+|||+++.++|+...++|
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip-------------------------~~~~~~i~~aGH~~~~e~Pe~~~~~i 281 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFP-------------------------DHVLVELPNAKHFIQEDAPDRIAAAI 281 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcC-------------------------CCeEEEcCCCcccccccCHHHHHHHH
Confidence 69999999999998866543 44445554 78899999999999999999999999
Q ss_pred HHHH
Q 011965 461 TKFL 464 (474)
Q Consensus 461 ~~fl 464 (474)
.+|+
T Consensus 282 ~~~~ 285 (286)
T PRK03204 282 IERF 285 (286)
T ss_pred HHhc
Confidence 9997
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.90 E-value=1.6e-07 Score=91.17 Aligned_cols=59 Identities=20% Similarity=0.128 Sum_probs=53.5
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
..+||+..|..|.+++..-.+.+...+. +.+++.|.+|||+++.++|+...++|.
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~~~~~~~-------------------------~~~~~~i~~agH~~~~e~p~~~~~~i~ 277 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLKLLWNMP-------------------------DAQLHVFSRCGHWAQWEHADAFNRLVI 277 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHHHHHhCC-------------------------CCEEEEeCCCCcCCcccCHHHHHHHHH
Confidence 7899999999999999877777777774 788899999999999999999999999
Q ss_pred HHHc
Q 011965 462 KFLS 465 (474)
Q Consensus 462 ~fl~ 465 (474)
+|+.
T Consensus 278 ~fl~ 281 (282)
T TIGR03343 278 DFLR 281 (282)
T ss_pred HHhh
Confidence 9985
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.86 E-value=1.2e-08 Score=94.15 Aligned_cols=104 Identities=21% Similarity=0.248 Sum_probs=71.8
Q ss_pred eEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHH
Q 011965 84 VLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYA 163 (474)
Q Consensus 84 ilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~ 163 (474)
||.+.|++|.+.. |..+.+ .+. +..+++.+|.| |.|.|..... +...+-++.++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l~-------~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------ALA-------RGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HHH-------TTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HHh-------CCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhh
Confidence 6889999999987 665544 121 45689999977 9999976543 111145566666666
Q ss_pred HHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 164 FLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 164 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
+|+. ... ++++|.|+|+||..+-.+|.+.- -.++|+++.++.....
T Consensus 59 ~l~~----~~~---~~~~lvG~S~Gg~~a~~~a~~~p-----------~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 59 LLDA----LGI---KKVILVGHSMGGMIALRLAARYP-----------DRVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHH----TTT---SSEEEEEETHHHHHHHHHHHHSG-----------GGEEEEEEESESSSHH
T ss_pred cccc----ccc---ccccccccccccccccccccccc-----------cccccceeeccccccc
Confidence 5544 322 58999999999988888875421 1499999999887643
No 19
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.85 E-value=1.2e-07 Score=88.93 Aligned_cols=60 Identities=25% Similarity=0.366 Sum_probs=53.0
Q ss_pred cCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHH
Q 011965 381 AGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 381 ~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i 460 (474)
-..+|++.+|..|.++|....+.+.+.+. +.+++.+.++||+++.++|+...+.+
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLVP-------------------------GARFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhCC-------------------------CceEEEECCCCCcccccChHHHHHHH
Confidence 36999999999999999987777777664 66788899999999999999999999
Q ss_pred HHHHc
Q 011965 461 TKFLS 465 (474)
Q Consensus 461 ~~fl~ 465 (474)
+.|+.
T Consensus 247 ~~fl~ 251 (251)
T TIGR02427 247 RDFLR 251 (251)
T ss_pred HHHhC
Confidence 99973
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.84 E-value=3.4e-07 Score=92.19 Aligned_cols=128 Identities=13% Similarity=0.146 Sum_probs=81.8
Q ss_pred CCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCccccc-CcceEEEeCCCCcCcC
Q 011965 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGFS 141 (474)
Q Consensus 63 ~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~-~anllfiDqPvGtGfS 141 (474)
.|..+|+..+... +...+|+||.+.|..+.++..|-.+.+ .+.+ -.+++-+|.| |.|.|
T Consensus 70 ~g~~l~~~~~~p~-~~~~~~~iv~lHG~~~~~~~~~~~~~~------------------~l~~~g~~v~~~D~~-G~G~S 129 (349)
T PLN02385 70 RGVEIFSKSWLPE-NSRPKAAVCFCHGYGDTCTFFFEGIAR------------------KIASSGYGVFAMDYP-GFGLS 129 (349)
T ss_pred CCCEEEEEEEecC-CCCCCeEEEEECCCCCccchHHHHHHH------------------HHHhCCCEEEEecCC-CCCCC
Confidence 4668888766532 224579999999986665541121111 1111 3689999988 99999
Q ss_pred cccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeec
Q 011965 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (474)
Q Consensus 142 ~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~ign 221 (474)
.... .+.. +-++.++|+.++++.. ...+++...+++|+|+|+||..+..+|.+ . +-.++|+++.+
T Consensus 130 ~~~~--~~~~-~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~---~--------p~~v~glVLi~ 194 (349)
T PLN02385 130 EGLH--GYIP-SFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLK---Q--------PNAWDGAILVA 194 (349)
T ss_pred CCCC--CCcC-CHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHh---C--------cchhhheeEec
Confidence 6432 2221 4556788888777653 33334555689999999999876665532 1 12389999999
Q ss_pred cccC
Q 011965 222 AVIN 225 (474)
Q Consensus 222 g~~d 225 (474)
|...
T Consensus 195 p~~~ 198 (349)
T PLN02385 195 PMCK 198 (349)
T ss_pred cccc
Confidence 8653
No 21
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.84 E-value=4.9e-07 Score=90.20 Aligned_cols=138 Identities=14% Similarity=0.147 Sum_probs=86.0
Q ss_pred eEEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCccccc-CcceE
Q 011965 52 HYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANML 130 (474)
Q Consensus 52 ~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~-~anll 130 (474)
...+++... +|..++|+.+.-......+|+|+++.|..+.++ +. +.+.. ..+.+ -.+|+
T Consensus 32 ~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~--~~-~~~~~---------------~~L~~~Gy~V~ 91 (330)
T PLN02298 32 GSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDIS--WT-FQSTA---------------IFLAQMGFACF 91 (330)
T ss_pred cccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcc--ee-hhHHH---------------HHHHhCCCEEE
Confidence 346666664 367899876643222245789999999954332 21 11100 01222 47999
Q ss_pred EEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCc
Q 011965 131 FLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDS 210 (474)
Q Consensus 131 fiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~ 210 (474)
-+|+| |.|.|.... .+.. +-+..++|+..+++..... .++...|++|+|+|.||..+..++. +.
T Consensus 92 ~~D~r-GhG~S~~~~--~~~~-~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~----~~------- 155 (330)
T PLN02298 92 ALDLE-GHGRSEGLR--AYVP-NVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHL----AN------- 155 (330)
T ss_pred EecCC-CCCCCCCcc--ccCC-CHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHh----cC-------
Confidence 99988 999985322 2222 4566788888888755432 2233458999999999987665543 11
Q ss_pred eeeeeeeEeeccccC
Q 011965 211 FINLKGFMIGNAVIN 225 (474)
Q Consensus 211 ~inLkGi~igng~~d 225 (474)
+-.++|+++.+++..
T Consensus 156 p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 156 PEGFDGAVLVAPMCK 170 (330)
T ss_pred cccceeEEEeccccc
Confidence 123999999998764
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.80 E-value=2.1e-07 Score=91.21 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=78.9
Q ss_pred CceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcc
Q 011965 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (474)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~ 143 (474)
+..++|.-. . +.|.||.+.|.|+++.. |-.+.+ .| .+...++-+|.| |-|.|..
T Consensus 16 g~~i~y~~~--G----~g~~vvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~via~D~~-G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIET--G----EGDPIVFLHGNPTSSYL-WRNIIP-----------HL-------AGLGRCLAPDLI-GMGASDK 69 (295)
T ss_pred CEEEEEEEe--C----CCCEEEEECCCCCCHHH-HHHHHH-----------HH-------hhCCEEEEEcCC-CCCCCCC
Confidence 456666522 1 24789999999999988 765443 12 223489999977 9999964
Q ss_pred cCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
.. ..+ +.++.|+|+..+|... ...+++|.|+|.||..+-.+|.+--+ .++|+++.|+.
T Consensus 70 ~~-~~~---~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~-----------~v~~lil~~~~ 127 (295)
T PRK03592 70 PD-IDY---TFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHPD-----------RVRGIAFMEAI 127 (295)
T ss_pred CC-CCC---CHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhChh-----------heeEEEEECCC
Confidence 32 222 5566777777766553 23589999999999877777754322 28999999986
Q ss_pred cCc
Q 011965 224 IND 226 (474)
Q Consensus 224 ~dp 226 (474)
..+
T Consensus 128 ~~~ 130 (295)
T PRK03592 128 VRP 130 (295)
T ss_pred CCC
Confidence 544
No 23
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.79 E-value=3.2e-07 Score=89.03 Aligned_cols=117 Identities=17% Similarity=0.098 Sum_probs=77.5
Q ss_pred CceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcc
Q 011965 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (474)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~ 143 (474)
+..+.|+..+. . ...|.||++.|-++.+.. |..+.+ .| .+..+++.+|.| |.|.|-.
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~vi~~Dl~-G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLEL-VFPFIE-----------AL-------DPDLEVIAFDVP-GVGGSST 67 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHH-HHHHHH-----------Hh-------ccCceEEEECCC-CCCCCCC
Confidence 45788876532 2 234678999987777776 654433 11 134699999977 9999964
Q ss_pred cCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
.. .++ +-+..++++.++|... .-.+++|.|+|+||..+-.+|.+--+ .++|+++.|+.
T Consensus 68 ~~-~~~---~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~-----------~v~~lvl~~~~ 125 (276)
T TIGR02240 68 PR-HPY---RFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPE-----------RCKKLILAATA 125 (276)
T ss_pred CC-CcC---cHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHH-----------HhhheEEeccC
Confidence 22 222 4455666666666553 23479999999999877777753222 29999999987
Q ss_pred cC
Q 011965 224 IN 225 (474)
Q Consensus 224 ~d 225 (474)
..
T Consensus 126 ~~ 127 (276)
T TIGR02240 126 AG 127 (276)
T ss_pred Cc
Confidence 64
No 24
>PRK06489 hypothetical protein; Provisional
Probab=98.71 E-value=1.9e-06 Score=87.09 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=49.2
Q ss_pred CCeEEEEecCCCCCCChhHH--HHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCC----eeccccCChHH
Q 011965 382 GLRIWVYSGDTDGRVPVTST--RYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGA----GHQVPAFAPAQ 455 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt--~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~A----GHmvP~dqP~~ 455 (474)
..+|||.+|+.|.++|.... +...+.+. +-++++|.+| ||++. ++|+.
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-------------------------~a~l~~i~~a~~~~GH~~~-e~P~~ 345 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRVK-------------------------HGRLVLIPASPETRGHGTT-GSAKF 345 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhCc-------------------------CCeEEEECCCCCCCCcccc-cCHHH
Confidence 79999999999999997754 44445553 6788999996 99986 89999
Q ss_pred HHHHHHHHHcC
Q 011965 456 SLSLFTKFLSA 466 (474)
Q Consensus 456 a~~~i~~fl~~ 466 (474)
..+.|.+|+..
T Consensus 346 ~~~~i~~FL~~ 356 (360)
T PRK06489 346 WKAYLAEFLAQ 356 (360)
T ss_pred HHHHHHHHHHh
Confidence 99999999964
No 25
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.71 E-value=1e-06 Score=89.12 Aligned_cols=105 Identities=17% Similarity=0.085 Sum_probs=69.2
Q ss_pred CCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHH
Q 011965 80 SKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAN 159 (474)
Q Consensus 80 ~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~ 159 (474)
+.|.||.+.|.++.+.. |..+.+. | .+...++-+|.| |.|.|.......+ +-++.++
T Consensus 87 ~gp~lvllHG~~~~~~~-w~~~~~~-----------L-------~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~ 143 (360)
T PLN02679 87 SGPPVLLVHGFGASIPH-WRRNIGV-----------L-------AKNYTVYAIDLL-GFGASDKPPGFSY---TMETWAE 143 (360)
T ss_pred CCCeEEEECCCCCCHHH-HHHHHHH-----------H-------hcCCEEEEECCC-CCCCCCCCCCccc---cHHHHHH
Confidence 34778899999988888 7654431 1 133589999977 9999854322222 4556777
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 160 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
++.++|... ...+++|.|+|+||..+-.+|.+ ...+ .++|+++.|+..
T Consensus 144 ~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~--~~P~--------rV~~LVLi~~~~ 191 (360)
T PLN02679 144 LILDFLEEV-------VQKPTVLIGNSVGSLACVIAASE--STRD--------LVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHh--cChh--------hcCEEEEECCcc
Confidence 777777642 23589999999999654444421 1111 289999988753
No 26
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.70 E-value=6.9e-07 Score=85.54 Aligned_cols=60 Identities=17% Similarity=0.059 Sum_probs=52.4
Q ss_pred cCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHH
Q 011965 381 AGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 381 ~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i 460 (474)
-..+|||.+|..|.++|....+...+.+. +..++.+.++||+.+.++|+...+.+
T Consensus 195 i~~P~lii~G~~D~~~~~~~~~~~~~~i~-------------------------~~~~~~i~~~gH~~~~e~p~~f~~~l 249 (256)
T PRK10349 195 VSMPFLRLYGYLDGLVPRKVVPMLDKLWP-------------------------HSESYIFAKAAHAPFISHPAEFCHLL 249 (256)
T ss_pred cCCCeEEEecCCCccCCHHHHHHHHHhCC-------------------------CCeEEEeCCCCCCccccCHHHHHHHH
Confidence 37999999999999999887765556654 78889999999999999999999999
Q ss_pred HHHHc
Q 011965 461 TKFLS 465 (474)
Q Consensus 461 ~~fl~ 465 (474)
.+|-+
T Consensus 250 ~~~~~ 254 (256)
T PRK10349 250 VALKQ 254 (256)
T ss_pred HHHhc
Confidence 99864
No 27
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.68 E-value=1.3e-06 Score=88.60 Aligned_cols=130 Identities=19% Similarity=0.195 Sum_probs=80.4
Q ss_pred ceeEEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcce
Q 011965 50 FKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANM 129 (474)
Q Consensus 50 ~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anl 129 (474)
.++-+|+.... ++-.+||. +. .+...|.||.+.|.|+.+.. |-.+.+. | .+...+
T Consensus 102 ~~~~~~~~~~~--~~~~~~y~--~~--G~~~~~~ivllHG~~~~~~~-w~~~~~~-----------L-------~~~~~V 156 (383)
T PLN03084 102 LKMGAQSQASS--DLFRWFCV--ES--GSNNNPPVLLIHGFPSQAYS-YRKVLPV-----------L-------SKNYHA 156 (383)
T ss_pred ccccceeEEcC--CceEEEEE--ec--CCCCCCeEEEECCCCCCHHH-HHHHHHH-----------H-------hcCCEE
Confidence 34445554432 23455544 22 23356899999999988877 6554431 2 234699
Q ss_pred EEEeCCCCcCcCcccCCC-CCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCC
Q 011965 130 LFLEAPVGVGFSYTNNSE-DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGK 208 (474)
Q Consensus 130 lfiDqPvGtGfS~~~~~~-~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~ 208 (474)
+-+|.| |.|+|...... ... .+-++.++++.+||+.. ...+++|+|+|+||..+-.+| .+..
T Consensus 157 ia~Dlp-G~G~S~~p~~~~~~~-ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a----~~~P---- 219 (383)
T PLN03084 157 IAFDWL-GFGFSDKPQPGYGFN-YTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYA----SAHP---- 219 (383)
T ss_pred EEECCC-CCCCCCCCccccccc-CCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHH----HhCh----
Confidence 999977 99999754321 111 15566677777776553 234799999999995444444 3321
Q ss_pred CceeeeeeeEeecccc
Q 011965 209 DSFINLKGFMIGNAVI 224 (474)
Q Consensus 209 ~~~inLkGi~igng~~ 224 (474)
-.++++++.|+..
T Consensus 220 ---~~v~~lILi~~~~ 232 (383)
T PLN03084 220 ---DKIKKLILLNPPL 232 (383)
T ss_pred ---HhhcEEEEECCCC
Confidence 2389999999764
No 28
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.64 E-value=1.6e-06 Score=88.42 Aligned_cols=128 Identities=17% Similarity=0.146 Sum_probs=85.5
Q ss_pred CCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCc
Q 011965 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSY 142 (474)
Q Consensus 63 ~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~ 142 (474)
.+..+|++.+... ....+|+||++.|.++.+.. |-.+.+. +. .+-.+++-+|.| |-|.|.
T Consensus 119 ~~~~l~~~~~~p~-~~~~~~~Vl~lHG~~~~~~~-~~~~a~~-----------L~------~~Gy~V~~~D~r-GhG~S~ 178 (395)
T PLN02652 119 RRNALFCRSWAPA-AGEMRGILIIIHGLNEHSGR-YLHFAKQ-----------LT------SCGFGVYAMDWI-GHGGSD 178 (395)
T ss_pred CCCEEEEEEecCC-CCCCceEEEEECCchHHHHH-HHHHHHH-----------HH------HCCCEEEEeCCC-CCCCCC
Confidence 3457888877653 23457899999999887766 5443321 11 123589999977 999986
Q ss_pred ccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecc
Q 011965 143 TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNA 222 (474)
Q Consensus 143 ~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng 222 (474)
... .+.. +.+..++|+.++++..-..+|. .|++|+|+|+||.-+..+|. +.+ ..-.++|+++.+|
T Consensus 179 ~~~--~~~~-~~~~~~~Dl~~~l~~l~~~~~~---~~i~lvGhSmGG~ial~~a~----~p~-----~~~~v~glVL~sP 243 (395)
T PLN02652 179 GLH--GYVP-SLDYVVEDTEAFLEKIRSENPG---VPCFLFGHSTGGAVVLKAAS----YPS-----IEDKLEGIVLTSP 243 (395)
T ss_pred CCC--CCCc-CHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECHHHHHHHHHHh----ccC-----cccccceEEEECc
Confidence 432 2222 4556678888888877666653 48999999999987655442 211 1124899999988
Q ss_pred ccC
Q 011965 223 VIN 225 (474)
Q Consensus 223 ~~d 225 (474)
++.
T Consensus 244 ~l~ 246 (395)
T PLN02652 244 ALR 246 (395)
T ss_pred ccc
Confidence 864
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.60 E-value=2.1e-06 Score=80.25 Aligned_cols=58 Identities=19% Similarity=0.115 Sum_probs=51.3
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
..+||+.+|..|.+++....+.+-+.+. +-++..+.++||+++.++|+...+.|.
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLAP-------------------------HSELYIFAKAAHAPFLSHAEAFCALLV 242 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhCC-------------------------CCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 6899999999999999887777666663 667788999999999999999999999
Q ss_pred HHH
Q 011965 462 KFL 464 (474)
Q Consensus 462 ~fl 464 (474)
+||
T Consensus 243 ~fi 245 (245)
T TIGR01738 243 AFK 245 (245)
T ss_pred hhC
Confidence 986
No 30
>PLN02578 hydrolase
Probab=98.56 E-value=5e-06 Score=83.88 Aligned_cols=112 Identities=15% Similarity=0.120 Sum_probs=73.7
Q ss_pred CceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcc
Q 011965 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (474)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~ 143 (474)
+.++.|.-.. +.|-||.+.|-++.+.. |....+ .+ .+..+++-+|.| |.|.|..
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~-w~~~~~-----------~l-------~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFH-WRYNIP-----------EL-------AKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hcCCEEEEECCC-CCCCCCC
Confidence 4567765322 13446888987666555 543322 11 234789999988 9998864
Q ss_pred cCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
.. ..| +.+..++++.+|++... ..+++|.|+|+||..+..+|.+--+ .++++++.|+.
T Consensus 129 ~~-~~~---~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~-----------~v~~lvLv~~~ 186 (354)
T PLN02578 129 AL-IEY---DAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGYPE-----------LVAGVALLNSA 186 (354)
T ss_pred cc-ccc---CHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhChH-----------hcceEEEECCC
Confidence 32 222 55666778877776643 3589999999999977777764322 38899998874
No 31
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.56 E-value=3e-06 Score=82.08 Aligned_cols=138 Identities=14% Similarity=0.191 Sum_probs=85.4
Q ss_pred CceeEEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcc
Q 011965 49 EFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAAN 128 (474)
Q Consensus 49 ~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~an 128 (474)
+.+.-+-|+.+.. +... |.++-...+++++-++.+.| =|++++.| . -|. .+..+.-|
T Consensus 62 ~v~~~~~~v~i~~--~~~i--w~~~~~~~~~~~~plVliHG-yGAg~g~f---~------~Nf---------~~La~~~~ 118 (365)
T KOG4409|consen 62 PVPYSKKYVRIPN--GIEI--WTITVSNESANKTPLVLIHG-YGAGLGLF---F------RNF---------DDLAKIRN 118 (365)
T ss_pred CCCcceeeeecCC--Ccee--EEEeecccccCCCcEEEEec-cchhHHHH---H------Hhh---------hhhhhcCc
Confidence 3344466777762 2223 22333333456666667775 46555422 2 122 22234679
Q ss_pred eEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCC
Q 011965 129 MLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGK 208 (474)
Q Consensus 129 llfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~ 208 (474)
|-.||+| |-|.|.-.. +.. +.+.+-+.|++-|.+|..... =.+.+|.|+|+||......|.+=-++
T Consensus 119 vyaiDll-G~G~SSRP~---F~~-d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer------ 184 (365)
T KOG4409|consen 119 VYAIDLL-GFGRSSRPK---FSI-DPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER------ 184 (365)
T ss_pred eEEeccc-CCCCCCCCC---CCC-CcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh------
Confidence 9999966 999996432 211 223344588899999998653 34799999999998876666443333
Q ss_pred CceeeeeeeEeeccccCccc
Q 011965 209 DSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 209 ~~~inLkGi~igng~~dp~~ 228 (474)
++-++|.+||--+..
T Consensus 185 -----V~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 185 -----VEKLILVSPWGFPEK 199 (365)
T ss_pred -----hceEEEecccccccC
Confidence 778999999987653
No 32
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.52 E-value=2.2e-05 Score=81.73 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=82.3
Q ss_pred eeEEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhh-hhhcCCeEEcCCCCcccccCcccccCcce
Q 011965 51 KHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGA-AQELGPFLVGGNGSRLKFNKYSWNKAANM 129 (474)
Q Consensus 51 ~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~-~~e~GP~~i~~~~~~l~~N~~SW~~~anl 129 (474)
+.-.-|++.+ +..|||+..... +....|.||++.|.+|.+.+ |.. +.+ .+.+ .+.+...+
T Consensus 175 ~~~~~~~~~~---~~~l~~~~~gp~-~~~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~yrV 235 (481)
T PLN03087 175 KFCTSWLSSS---NESLFVHVQQPK-DNKAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTYRL 235 (481)
T ss_pred ceeeeeEeeC---CeEEEEEEecCC-CCCCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCCEE
Confidence 3445666664 357888865543 22335789999999999888 752 111 0111 12345789
Q ss_pred EEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCC
Q 011965 130 LFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKD 209 (474)
Q Consensus 130 lfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~ 209 (474)
+.+|.| |.|.|.......| +.++.++++. +.+++.. ...+++|.|+|.||..+-.+|.+--+
T Consensus 236 ia~Dl~-G~G~S~~p~~~~y---tl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe-------- 297 (481)
T PLN03087 236 FAVDLL-GFGRSPKPADSLY---TLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPG-------- 297 (481)
T ss_pred EEECCC-CCCCCcCCCCCcC---CHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH--------
Confidence 999977 9998853322222 4444555442 2334432 24589999999999988777764222
Q ss_pred ceeeeeeeEeeccc
Q 011965 210 SFINLKGFMIGNAV 223 (474)
Q Consensus 210 ~~inLkGi~igng~ 223 (474)
.++++++.++.
T Consensus 298 ---~V~~LVLi~~~ 308 (481)
T PLN03087 298 ---AVKSLTLLAPP 308 (481)
T ss_pred ---hccEEEEECCC
Confidence 27888988863
No 33
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.51 E-value=1.2e-05 Score=79.33 Aligned_cols=126 Identities=16% Similarity=0.295 Sum_probs=77.1
Q ss_pred EeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEe
Q 011965 54 AGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLE 133 (474)
Q Consensus 54 sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiD 133 (474)
.+|+.+.+ +..|+|+-. .++.. |-||.+.||||.++. ..... .+. .+..++|-+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~~-~~lvllHG~~~~~~~-~~~~~-----~~~-------------~~~~~vi~~D 60 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPDG-KPVVFLHGGPGSGTD-PGCRR-----FFD-------------PETYRIVLFD 60 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCCC-CEEEEECCCCCCCCC-HHHHh-----ccC-------------ccCCEEEEEC
Confidence 47888864 567887643 22333 446889999998765 21110 000 1347899999
Q ss_pred CCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceee
Q 011965 134 APVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFIN 213 (474)
Q Consensus 134 qPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~in 213 (474)
+| |.|.|..... .... +.++.++++..++ +.. ...++++.|+||||..+..+|.+--+ .
T Consensus 61 ~~-G~G~S~~~~~-~~~~-~~~~~~~dl~~l~----~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~-----------~ 119 (306)
T TIGR01249 61 QR-GCGKSTPHAC-LEEN-TTWDLVADIEKLR----EKL---GIKNWLVFGGSWGSTLALAYAQTHPE-----------V 119 (306)
T ss_pred CC-CCCCCCCCCC-cccC-CHHHHHHHHHHHH----HHc---CCCCEEEEEECHHHHHHHHHHHHChH-----------h
Confidence 77 9999974321 1111 3444555554444 332 23479999999999877777654322 2
Q ss_pred eeeeEeeccccC
Q 011965 214 LKGFMIGNAVIN 225 (474)
Q Consensus 214 LkGi~igng~~d 225 (474)
++++++.+..+.
T Consensus 120 v~~lvl~~~~~~ 131 (306)
T TIGR01249 120 VTGLVLRGIFLL 131 (306)
T ss_pred hhhheeeccccC
Confidence 788888877654
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.51 E-value=4.8e-06 Score=85.41 Aligned_cols=109 Identities=13% Similarity=0.127 Sum_probs=70.4
Q ss_pred CCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHH
Q 011965 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (474)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a 158 (474)
.+.|.||.+.|.++.+.. |....+ .+ .+..+++-+|.| |.|.|... ...+. +.+++.
T Consensus 103 ~~~p~vvllHG~~~~~~~-~~~~~~-----------~L-------~~~~~vi~~D~r-G~G~S~~~-~~~~~--~~~~~~ 159 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGF-FFRNFD-----------AL-------ASRFRVIAIDQL-GWGGSSRP-DFTCK--STEETE 159 (402)
T ss_pred CCCCEEEEECCCCcchhH-HHHHHH-----------HH-------HhCCEEEEECCC-CCCCCCCC-Ccccc--cHHHHH
Confidence 467999999999887766 532211 12 234689999977 99988432 11111 233444
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 159 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
+.+.+.+..|.+.. ...+++|.|+|+||.-+-.+|.+- +-.++++++.++..
T Consensus 160 ~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~-----------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 160 AWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH-----------PEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC-----------chhhcEEEEECCcc
Confidence 45666666776543 234899999999998777666432 12388899888764
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.49 E-value=9.1e-06 Score=82.18 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=69.0
Q ss_pred CCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHH
Q 011965 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (474)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a 158 (474)
.+.|.||++.|.+|++.. |..+.+. |. +..+++-+|.| |.|.|...... . +.++.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~~-----------l~-------~~~~v~~~d~~-g~G~s~~~~~~---~-~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHAA-----------LA-------AGRPVIALDLP-GHGASSKAVGA---G-SLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHHH-----------Hh-------cCCEEEEEcCC-CCCCCCCCCCC---C-CHHHHH
Confidence 446889999999998888 6655441 21 12689999976 99998432211 1 455556
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 159 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
+++.++++. . ...+++|.|+|+||..+..+|.+-- -.++++++.++.
T Consensus 185 ~~~~~~~~~----~---~~~~~~lvG~S~Gg~~a~~~a~~~~-----------~~v~~lv~~~~~ 231 (371)
T PRK14875 185 AAVLAFLDA----L---GIERAHLVGHSMGGAVALRLAARAP-----------QRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHHh----c---CCccEEEEeechHHHHHHHHHHhCc-----------hheeEEEEECcC
Confidence 665555533 2 3357999999999998888876421 237788877664
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.47 E-value=2.3e-06 Score=80.00 Aligned_cols=105 Identities=21% Similarity=0.288 Sum_probs=67.5
Q ss_pred CCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHH
Q 011965 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (474)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d 160 (474)
+|.||.+.|.+|.+.. |-.+.+ .|. +..+++-+|.| |.|.|........ . +.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L~-------~~~~v~~~d~~-g~G~s~~~~~~~~-~-~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LLG-------PHFRCLAIDLP-GHGSSQSPDEIER-Y-DFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hhc-------ccCeEEEEcCC-CCCCCCCCCccCh-h-hHHHHHHH
Confidence 4789999999888877 643332 111 23689999966 9999854321111 1 34444544
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 161 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
+ +..+.+.+ ..++++|.|+|+||..+..+|.+.- -.++++++.++..
T Consensus 59 ~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~-----------~~v~~lil~~~~~ 105 (251)
T TIGR03695 59 I---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYP-----------ERVQGLILESGSP 105 (251)
T ss_pred H---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCc-----------hheeeeEEecCCC
Confidence 2 33333433 2468999999999998888886431 2388999887753
No 37
>PRK10749 lysophospholipase L2; Provisional
Probab=98.47 E-value=1.8e-05 Score=79.04 Aligned_cols=125 Identities=14% Similarity=0.071 Sum_probs=80.4
Q ss_pred CceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcc
Q 011965 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (474)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~ 143 (474)
|..++|+.+.. +..+|+||.+.|-.+.+.. |.-+.. . +. .+-.+++-+|.| |.|.|..
T Consensus 40 g~~l~~~~~~~---~~~~~~vll~HG~~~~~~~-y~~~~~---~--------l~------~~g~~v~~~D~~-G~G~S~~ 97 (330)
T PRK10749 40 DIPIRFVRFRA---PHHDRVVVICPGRIESYVK-YAELAY---D--------LF------HLGYDVLIIDHR-GQGRSGR 97 (330)
T ss_pred CCEEEEEEccC---CCCCcEEEEECCccchHHH-HHHHHH---H--------HH------HCCCeEEEEcCC-CCCCCCC
Confidence 56788887753 2456889999988665544 433321 0 11 123589999977 9999963
Q ss_pred cCCC---CCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEee
Q 011965 144 NNSE---DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIG 220 (474)
Q Consensus 144 ~~~~---~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~ig 220 (474)
.... .... +-++.++|+..+++.....++ ..|++|.|+|.||..+-.+|.+ .. -.++|+++.
T Consensus 98 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~---~p--------~~v~~lvl~ 162 (330)
T PRK10749 98 LLDDPHRGHVE-RFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQR---HP--------GVFDAIALC 162 (330)
T ss_pred CCCCCCcCccc-cHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHh---CC--------CCcceEEEE
Confidence 2111 1111 445677788888776655443 4689999999999776666542 21 237999999
Q ss_pred ccccC
Q 011965 221 NAVIN 225 (474)
Q Consensus 221 ng~~d 225 (474)
+|...
T Consensus 163 ~p~~~ 167 (330)
T PRK10749 163 APMFG 167 (330)
T ss_pred Cchhc
Confidence 88754
No 38
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.46 E-value=2.3e-06 Score=80.94 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=67.8
Q ss_pred CCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHH
Q 011965 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (474)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d 160 (474)
.|.||.+.|.+|++.. |-.+.+. + +..+++-+|.| |.|.|..... . +-++.+++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~~-----------l--------~~~~vi~~D~~-G~G~S~~~~~----~-~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGEA-----------L--------PDYPRLYIDLP-GHGGSAAISV----D-GFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHHH-----------c--------CCCCEEEecCC-CCCCCCCccc----c-CHHHHHHH
Confidence 5889999999998888 7544331 1 23699999966 9999963221 1 44555666
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 161 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
+.++|.. . ...+++++|+|+||.-+-.+|.+... -.+++++|.++.
T Consensus 56 l~~~l~~----~---~~~~~~lvG~S~Gg~va~~~a~~~~~----------~~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQS----Y---NILPYWLVGYSLGGRIAMYYACQGLA----------GGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHH----c---CCCCeEEEEECHHHHHHHHHHHhCCc----------ccccEEEEeCCC
Confidence 6655543 2 34589999999999877777764211 117888887654
No 39
>PLN02965 Probable pheophorbidase
Probab=98.40 E-value=1.2e-05 Score=77.00 Aligned_cols=60 Identities=7% Similarity=-0.000 Sum_probs=53.2
Q ss_pred cCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHH
Q 011965 381 AGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 381 ~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i 460 (474)
-.+++|+..|..|.++|....+...+.+. +-+++.+.+|||++...+|+...++|
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-------------------------~a~~~~i~~~GH~~~~e~p~~v~~~l 246 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP-------------------------PAQTYVLEDSDHSAFFSVPTTLFQYL 246 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC-------------------------cceEEEecCCCCchhhcCHHHHHHHH
Confidence 37999999999999999987777777774 66778899999999999999999999
Q ss_pred HHHHc
Q 011965 461 TKFLS 465 (474)
Q Consensus 461 ~~fl~ 465 (474)
.+|+.
T Consensus 247 ~~~~~ 251 (255)
T PLN02965 247 LQAVS 251 (255)
T ss_pred HHHHH
Confidence 99975
No 40
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.35 E-value=6.6e-06 Score=82.63 Aligned_cols=62 Identities=18% Similarity=0.157 Sum_probs=53.4
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcC-CeeccccCChHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRG-AGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~-AGHmvP~dqP~~a~~~i 460 (474)
..++||..|+.|.++|....+...+.+. . +-.+++|.+ |||+++.++|+....+|
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p-~a~l~~i~~~aGH~~~lE~Pe~~~~~l 332 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------P-RGSLRVLRSPYGHDAFLKETDRIDAIL 332 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------C-CCeEEEEeCCccHHHHhcCHHHHHHHH
Confidence 6899999999999999888888777773 1 567788874 99999999999999999
Q ss_pred HHHHcCC
Q 011965 461 TKFLSAA 467 (474)
Q Consensus 461 ~~fl~~~ 467 (474)
.+||...
T Consensus 333 ~~FL~~~ 339 (343)
T PRK08775 333 TTALRST 339 (343)
T ss_pred HHHHHhc
Confidence 9999653
No 41
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.33 E-value=8.3e-05 Score=71.90 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=91.8
Q ss_pred eeEEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceE
Q 011965 51 KHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANML 130 (474)
Q Consensus 51 ~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anll 130 (474)
....+|++++ + +++++.|. -++..|+|+.|.|=|=.+=. |=+-.+ .+.. +...+|
T Consensus 21 ~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wys-wr~q~~-----------~la~------~~~rvi 75 (322)
T KOG4178|consen 21 AISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYS-WRHQIP-----------GLAS------RGYRVI 75 (322)
T ss_pred hcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchh-hhhhhh-----------hhhh------cceEEE
Confidence 4567888885 2 88888886 68889999999999977665 421111 1211 125789
Q ss_pred EEeCCCCcCcCcccCC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCC
Q 011965 131 FLEAPVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKD 209 (474)
Q Consensus 131 fiDqPvGtGfS~~~~~-~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~ 209 (474)
.+|.+ |-|+|..... ..| +-+..+.|+..+|...= ...+++.|++||+.-+=.+|..--++.+
T Consensus 76 A~Dlr-GyG~Sd~P~~~~~Y---t~~~l~~di~~lld~Lg-------~~k~~lvgHDwGaivaw~la~~~Perv~----- 139 (322)
T KOG4178|consen 76 APDLR-GYGFSDAPPHISEY---TIDELVGDIVALLDHLG-------LKKAFLVGHDWGAIVAWRLALFYPERVD----- 139 (322)
T ss_pred ecCCC-CCCCCCCCCCccee---eHHHHHHHHHHHHHHhc-------cceeEEEeccchhHHHHHHHHhChhhcc-----
Confidence 99977 9999987554 333 56677777776665432 4579999999999887777766555422
Q ss_pred ceeeeeeeEeeccccCccc
Q 011965 210 SFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 210 ~~inLkGi~igng~~dp~~ 228 (474)
..+++++... ||..+|..
T Consensus 140 ~lv~~nv~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 140 GLVTLNVPFP-NPKLKPLD 157 (322)
T ss_pred eEEEecCCCC-Ccccchhh
Confidence 2355555555 66666654
No 42
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.27 E-value=2e-05 Score=93.87 Aligned_cols=108 Identities=18% Similarity=0.221 Sum_probs=72.0
Q ss_pred CCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCC-----CCCcc
Q 011965 77 GVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNS-----EDLHK 151 (474)
Q Consensus 77 ~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~-----~~~~~ 151 (474)
+.++.|.||++.|.+|++.. |-.+.+ .+ .+..+++.+|.| |-|.|..... ....
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~- 1425 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTEPT- 1425 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEcCC-CCCCCCCcccccccccccc-
Confidence 34567899999999999988 754443 12 123689999977 9998864321 0111
Q ss_pred CChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 152 LGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 152 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
.+-+..++++.+++... ...+++|+|+|+||..+-.+|.+--+ .++++++.++.
T Consensus 1426 ~si~~~a~~l~~ll~~l-------~~~~v~LvGhSmGG~iAl~~A~~~P~-----------~V~~lVlis~~ 1479 (1655)
T PLN02980 1426 LSVELVADLLYKLIEHI-------TPGKVTLVGYSMGARIALYMALRFSD-----------KIEGAVIISGS 1479 (1655)
T ss_pred CCHHHHHHHHHHHHHHh-------CCCCEEEEEECHHHHHHHHHHHhChH-----------hhCEEEEECCC
Confidence 14556666666665532 24589999999999887777754322 27888887764
No 43
>PRK07581 hypothetical protein; Validated
Probab=98.26 E-value=2.5e-05 Score=78.17 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=53.3
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcC-CeeccccCChHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRG-AGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~-AGHmvP~dqP~~a~~~i 460 (474)
..+|||.+|+.|..+|....+.+.+.+. +.++++|.+ +||+++.+||+....+|
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip-------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP-------------------------NAELRPIESIWGHLAGFGQNPADIAFI 329 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------CCeEEEeCCCCCccccccCcHHHHHHH
Confidence 6999999999999999998888777774 677888998 99999999999999999
Q ss_pred HHHHc
Q 011965 461 TKFLS 465 (474)
Q Consensus 461 ~~fl~ 465 (474)
++|+.
T Consensus 330 ~~~~~ 334 (339)
T PRK07581 330 DAALK 334 (339)
T ss_pred HHHHH
Confidence 99985
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.22 E-value=5.1e-05 Score=75.87 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=52.3
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCC-hHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFA-PAQSLSLF 460 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dq-P~~a~~~i 460 (474)
.+++|+.+|..|.+++..+++.+.+++.-+ +-++..+.+++|+...+. ++.+.+.+
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~-----------------------~~~l~~~~g~~H~i~~E~~~~~v~~~i 326 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSIS-----------------------NKELHTLEDMDHVITIEPGNEEVLKKI 326 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCC-----------------------CcEEEEECCCCCCCccCCCHHHHHHHH
Confidence 689999999999999999999888876421 456678899999999885 67888999
Q ss_pred HHHHcC
Q 011965 461 TKFLSA 466 (474)
Q Consensus 461 ~~fl~~ 466 (474)
.+||.+
T Consensus 327 ~~wL~~ 332 (332)
T TIGR01607 327 IEWISN 332 (332)
T ss_pred HHHhhC
Confidence 999864
No 45
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.19 E-value=2.2e-05 Score=85.03 Aligned_cols=122 Identities=20% Similarity=0.262 Sum_probs=77.8
Q ss_pred eEEecCCCCceEEEEEEeecC-CCCC-CCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcc-cccCcceEEE
Q 011965 56 YVKLRPNDHKALFYWFFEAQK-GVSS-KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYS-WNKAANMLFL 132 (474)
Q Consensus 56 yl~v~~~~~~~lFy~~~es~~-~~~~-~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~S-W~~~anllfi 132 (474)
++.+....|..+..|++.-.. ++.. -|+|+++-||| +++ ++. ... .+... +.+-..||++
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~~~-------~~~q~~~~~G~~V~~~ 429 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------SFN-------PEIQVLASAGYAVLAP 429 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------ccc-------hhhHHHhcCCeEEEEe
Confidence 334433346789999887643 3333 49999999999 666 451 111 11111 2355789999
Q ss_pred eCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHH
Q 011965 133 EAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLA 196 (474)
Q Consensus 133 DqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 196 (474)
+.---+||+..-.......++ ....+|+.+++. |+...|..-...+.|+|.||||...-.++
T Consensus 430 n~RGS~GyG~~F~~~~~~~~g-~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~ 491 (620)
T COG1506 430 NYRGSTGYGREFADAIRGDWG-GVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAA 491 (620)
T ss_pred CCCCCCccHHHHHHhhhhccC-CccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHH
Confidence 955556665431111111112 235678889999 99999988878899999999997765555
No 46
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.07 E-value=0.00018 Score=73.38 Aligned_cols=64 Identities=17% Similarity=0.170 Sum_probs=53.0
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEc-CCeeccccCChHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVR-GAGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~-~AGHmvP~dqP~~a~~~i 460 (474)
..++||..|+.|.++|....+...+.+. +. ++..+++.|. ++||+.+.++|++..+.|
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~--~a-------------------~~~~~l~~i~~~~GH~~~le~p~~~~~~L 367 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALL--AA-------------------GADVSYAEIDSPYGHDAFLLDDPRYGRLV 367 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHH--hc-------------------CCCeEEEEeCCCCCchhHhcCHHHHHHHH
Confidence 6899999999999999988887777774 00 0034778886 999999999999999999
Q ss_pred HHHHcC
Q 011965 461 TKFLSA 466 (474)
Q Consensus 461 ~~fl~~ 466 (474)
.+|+.+
T Consensus 368 ~~FL~~ 373 (379)
T PRK00175 368 RAFLER 373 (379)
T ss_pred HHHHHh
Confidence 999975
No 47
>PLN02872 triacylglycerol lipase
Probab=97.99 E-value=4.7e-05 Score=77.62 Aligned_cols=61 Identities=21% Similarity=0.382 Sum_probs=50.7
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeec---cccCChHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQ---VPAFAPAQSLS 458 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHm---vP~dqP~~a~~ 458 (474)
+++|+++.|..|.+++....+++.+.+. +...+..+.++||+ ...+.|+..++
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp------------------------~~~~l~~l~~~gH~dfi~~~eape~V~~ 380 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP------------------------SKPELLYLENYGHIDFLLSTSAKEDVYN 380 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC------------------------CccEEEEcCCCCCHHHHhCcchHHHHHH
Confidence 5899999999999999999999999985 01345678999996 34588999999
Q ss_pred HHHHHHcC
Q 011965 459 LFTKFLSA 466 (474)
Q Consensus 459 ~i~~fl~~ 466 (474)
.|.+|+.+
T Consensus 381 ~Il~fL~~ 388 (395)
T PLN02872 381 HMIQFFRS 388 (395)
T ss_pred HHHHHHHH
Confidence 99989874
No 48
>PLN02511 hydrolase
Probab=97.94 E-value=2.4e-05 Score=79.87 Aligned_cols=136 Identities=15% Similarity=0.115 Sum_probs=79.9
Q ss_pred EeeEEecCCCCceEEEEEEee--cCCCCCCCceEeecCCCChhhhhhh-hhhhcCCeEEcCCCCcccccCcccccCcceE
Q 011965 54 AGYVKLRPNDHKALFYWFFEA--QKGVSSKPLVLWLNGGPGCSSIAYG-AAQELGPFLVGGNGSRLKFNKYSWNKAANML 130 (474)
Q Consensus 54 sGyl~v~~~~~~~lFy~~~es--~~~~~~~PlilWlnGGPG~SS~~~g-~~~e~GP~~i~~~~~~l~~N~~SW~~~anll 130 (474)
--++...| |..+.+..+.. ...+.++|+||.+.|..|+|...|- .+.. .+ ..+-.+++
T Consensus 73 re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------~~------~~~g~~vv 133 (388)
T PLN02511 73 RECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL-----------RA------RSKGWRVV 133 (388)
T ss_pred EEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH-----------HH------HHCCCEEE
Confidence 34555543 45565544432 1235678999999999998742121 1111 00 02345899
Q ss_pred EEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCc
Q 011965 131 FLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDS 210 (474)
Q Consensus 131 fiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~ 210 (474)
-+|.| |.|-|.......+ ....++|+.++|+..-.++| ..+++++|+|.||..+-.++.+ ..+
T Consensus 134 ~~d~r-G~G~s~~~~~~~~----~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~---~~~------ 196 (388)
T PLN02511 134 VFNSR-GCADSPVTTPQFY----SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE---EGE------ 196 (388)
T ss_pred EEecC-CCCCCCCCCcCEE----cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh---cCC------
Confidence 99977 8888864333222 12345677777776666676 4589999999999876555432 211
Q ss_pred eeeeeeeEeeccccC
Q 011965 211 FINLKGFMIGNAVIN 225 (474)
Q Consensus 211 ~inLkGi~igng~~d 225 (474)
..+|++.++.++-.+
T Consensus 197 ~~~v~~~v~is~p~~ 211 (388)
T PLN02511 197 NCPLSGAVSLCNPFD 211 (388)
T ss_pred CCCceEEEEECCCcC
Confidence 234667665554334
No 49
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.92 E-value=3.8e-05 Score=71.38 Aligned_cols=56 Identities=20% Similarity=0.234 Sum_probs=50.0
Q ss_pred cCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHH
Q 011965 381 AGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 381 ~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i 460 (474)
-.+++|+.+|..|.++|....+...+.+. +..++.+.++||....+.|++..++|
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLIP-------------------------NSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHST-------------------------TEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcC-------------------------CCEEEECCCCChHHHhcCHHhhhhhh
Confidence 47999999999999999998888666664 78889999999999999999988877
Q ss_pred H
Q 011965 461 T 461 (474)
Q Consensus 461 ~ 461 (474)
.
T Consensus 229 ~ 229 (230)
T PF00561_consen 229 I 229 (230)
T ss_dssp H
T ss_pred c
Confidence 5
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=97.92 E-value=0.00029 Score=75.66 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=67.2
Q ss_pred CceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcc
Q 011965 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (474)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~ 143 (474)
+..|.|+-+. +.+.|.||.+.|.++.+.. |..+.+. + .+...++-+|.| |.|.|..
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~-w~~~~~~-----------L-------~~~~~Vi~~D~~-G~G~S~~ 67 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEV-WDGVAPL-----------L-------ADRFRVVAYDVR-GAGRSSA 67 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHH-HHHHHHH-----------h-------hcceEEEEecCC-CCCCCCC
Confidence 4567766442 2347899999999888777 6654431 2 123689999977 9999975
Q ss_pred cCC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHH
Q 011965 144 NNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQL 195 (474)
Q Consensus 144 ~~~-~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 195 (474)
... ..+ +.++.++|+.++++..- ...|++|+|+|+||..+-.+
T Consensus 68 ~~~~~~~---~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 68 PKRTAAY---TLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred CCccccc---CHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHHHH
Confidence 332 222 56778888888887531 13479999999999544333
No 51
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.90 E-value=0.00034 Score=68.73 Aligned_cols=138 Identities=17% Similarity=0.160 Sum_probs=91.4
Q ss_pred eeEEeeEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceE
Q 011965 51 KHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANML 130 (474)
Q Consensus 51 ~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anll 130 (474)
...-|+.... .+..++|+-+...+++. -+|+++.|.=..+.- |-.+.+. +.. .=.+++
T Consensus 8 ~~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~~-----------l~~------~G~~V~ 65 (298)
T COG2267 8 TRTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELADD-----------LAA------RGFDVY 65 (298)
T ss_pred ccccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHHH-----------HHh------CCCEEE
Confidence 3445555554 36789999888754443 899999999777776 6554331 111 224788
Q ss_pred EEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCc
Q 011965 131 FLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDS 210 (474)
Q Consensus 131 fiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~ 210 (474)
=+|+| |.|-|.- ....... +-.+...|+..|++......| ..|+||+|+|-||-.+...+.+-.
T Consensus 66 ~~D~R-GhG~S~r-~~rg~~~-~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~---------- 129 (298)
T COG2267 66 ALDLR-GHGRSPR-GQRGHVD-SFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP---------- 129 (298)
T ss_pred EecCC-CCCCCCC-CCcCCch-hHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC----------
Confidence 89988 9999972 1122211 334455566666666555444 569999999999977666554332
Q ss_pred eeeeeeeEeeccccCcc
Q 011965 211 FINLKGFMIGNAVINDP 227 (474)
Q Consensus 211 ~inLkGi~igng~~dp~ 227 (474)
-+++|++|-+|++...
T Consensus 130 -~~i~~~vLssP~~~l~ 145 (298)
T COG2267 130 -PRIDGLVLSSPALGLG 145 (298)
T ss_pred -ccccEEEEECccccCC
Confidence 4599999999998765
No 52
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.73 E-value=0.00074 Score=67.13 Aligned_cols=60 Identities=25% Similarity=0.362 Sum_probs=54.4
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
+.+|||..|+.|.++|....+...+++. |..+..|.+|||.+..++|++....|.
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~p-------------------------n~~~~~I~~~gH~~h~e~Pe~~~~~i~ 318 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKLP-------------------------NAELVEIPGAGHLPHLERPEEVAALLR 318 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhCC-------------------------CceEEEeCCCCcccccCCHHHHHHHHH
Confidence 4889999999999999997777766663 999999999999999999999999999
Q ss_pred HHHcC
Q 011965 462 KFLSA 466 (474)
Q Consensus 462 ~fl~~ 466 (474)
.|+.+
T Consensus 319 ~Fi~~ 323 (326)
T KOG1454|consen 319 SFIAR 323 (326)
T ss_pred HHHHH
Confidence 99975
No 53
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.72 E-value=6.1e-05 Score=74.95 Aligned_cols=133 Identities=16% Similarity=0.224 Sum_probs=83.3
Q ss_pred eEEEEEEeec--CCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcc
Q 011965 66 ALFYWFFEAQ--KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (474)
Q Consensus 66 ~lFy~~~es~--~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~ 143 (474)
+=.||++++. .+|++|||||++.|| |.+.+.=|+.+. ...+=|...+...+|.+|-..-. ..
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~---~~ 168 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS---SD 168 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc---cc
Confidence 3479999863 468889999999999 444454454432 11122222334499999944322 00
Q ss_pred cCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
..+..|++ . ..++.+..+...+.- ..+.+.|.|+|=||+.+-.+..++.+.+.. +-=+++++.+||
T Consensus 169 ~~~~~yPt--Q---L~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~------~~Pk~~iLISPW 234 (374)
T PF10340_consen 169 EHGHKYPT--Q---LRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL------PYPKSAILISPW 234 (374)
T ss_pred cCCCcCch--H---HHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC------CCCceeEEECCC
Confidence 12334442 2 233344444444322 235799999999999999999998775431 223799999999
Q ss_pred cCccc
Q 011965 224 INDPT 228 (474)
Q Consensus 224 ~dp~~ 228 (474)
+++..
T Consensus 235 v~l~~ 239 (374)
T PF10340_consen 235 VNLVP 239 (374)
T ss_pred cCCcC
Confidence 99863
No 54
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.66 E-value=0.00017 Score=67.05 Aligned_cols=92 Identities=16% Similarity=0.112 Sum_probs=61.2
Q ss_pred cCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhh
Q 011965 125 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNI 204 (474)
Q Consensus 125 ~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 204 (474)
+=..|+.+|..-+.||+..-....... .-....+|+.++++...++. ......+.|+|.||||+.+-.++.+ ..
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~---~~- 86 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQ---HP- 86 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHH---TC-
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcc---cc-
Confidence 446899999988888876432222222 23456788888877776654 4445679999999999988877651 21
Q ss_pred hcCCCceeeeeeeEeeccccCcccc
Q 011965 205 RAGKDSFINLKGFMIGNAVINDPTD 229 (474)
Q Consensus 205 ~~~~~~~inLkGi~igng~~dp~~q 229 (474)
-.++.++.++|++|+...
T Consensus 87 -------~~f~a~v~~~g~~d~~~~ 104 (213)
T PF00326_consen 87 -------DRFKAAVAGAGVSDLFSY 104 (213)
T ss_dssp -------CGSSEEEEESE-SSTTCS
T ss_pred -------eeeeeeeccceecchhcc
Confidence 237889999999887643
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.53 E-value=0.0011 Score=64.21 Aligned_cols=78 Identities=18% Similarity=0.158 Sum_probs=53.9
Q ss_pred cceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhc
Q 011965 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRA 206 (474)
Q Consensus 127 anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 206 (474)
.+++-+|.| |.|-|.... . +-.+..+|+.++++.+-+..|.+ .++.++|.|.||..+-.+|. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~----~--~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~--- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN----L--GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD--- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC----C--CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC---
Confidence 689999987 999886421 1 33445677777777666666654 36999999999965544432 11
Q ss_pred CCCceeeeeeeEeeccccC
Q 011965 207 GKDSFINLKGFMIGNAVIN 225 (474)
Q Consensus 207 ~~~~~inLkGi~igng~~d 225 (474)
-.++|+++.||++.
T Consensus 122 -----~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 -----LRVAGLVLLNPWVR 135 (274)
T ss_pred -----CCccEEEEECCccC
Confidence 24999999998754
No 56
>PRK10985 putative hydrolase; Provisional
Probab=97.49 E-value=0.0013 Score=65.47 Aligned_cols=46 Identities=7% Similarity=-0.109 Sum_probs=36.4
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCC
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFA 452 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dq 452 (474)
.+++|+.+|+.|.+++....+...... . +++++++.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPESLP------------------------P-NVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHHHhC------------------------C-CeEEEECCCCCceeeCCC
Confidence 689999999999999976655443222 2 788899999999988764
No 57
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.31 E-value=0.00099 Score=68.61 Aligned_cols=130 Identities=18% Similarity=0.188 Sum_probs=77.1
Q ss_pred eEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChh--hhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEe
Q 011965 56 YVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCS--SIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLE 133 (474)
Q Consensus 56 yl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~S--S~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiD 133 (474)
.|.+.-..+..|--|++... .....|+||. .||.++. .+ |..+.+ .+. .+-.++|-+|
T Consensus 170 ~v~i~~~~g~~l~g~l~~P~-~~~~~P~Vli-~gG~~~~~~~~-~~~~~~-----------~La------~~Gy~vl~~D 229 (414)
T PRK05077 170 ELEFPIPGGGPITGFLHLPK-GDGPFPTVLV-CGGLDSLQTDY-YRLFRD-----------YLA------PRGIAMLTID 229 (414)
T ss_pred EEEEEcCCCcEEEEEEEECC-CCCCccEEEE-eCCcccchhhh-HHHHHH-----------HHH------hCCCEEEEEC
Confidence 34443223335665555432 2355798885 5777763 23 332221 011 1225899999
Q ss_pred CCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceee
Q 011965 134 APVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFIN 213 (474)
Q Consensus 134 qPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~in 213 (474)
.| |.|.|..... .. + ...+...+.+|+...|.....++.|+|.|+||..++.+|..-- -.
T Consensus 230 ~p-G~G~s~~~~~---~~-d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p-----------~r 289 (414)
T PRK05077 230 MP-SVGFSSKWKL---TQ-D----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP-----------PR 289 (414)
T ss_pred CC-CCCCCCCCCc---cc-c----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC-----------cC
Confidence 88 9999854211 10 1 1222234556666677666678999999999999998885321 13
Q ss_pred eeeeEeeccccC
Q 011965 214 LKGFMIGNAVIN 225 (474)
Q Consensus 214 LkGi~igng~~d 225 (474)
++++++.+|.++
T Consensus 290 i~a~V~~~~~~~ 301 (414)
T PRK05077 290 LKAVACLGPVVH 301 (414)
T ss_pred ceEEEEECCccc
Confidence 888888887754
No 58
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.16 E-value=0.0018 Score=62.83 Aligned_cols=107 Identities=13% Similarity=0.136 Sum_probs=68.7
Q ss_pred CCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHH
Q 011965 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (474)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a 158 (474)
.++|.||++.|..+.++. |..+.+ .|.. +-.+++-+|.| |.|.|.......+ +-++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~-----------~L~~------~g~~vi~~dl~-g~G~s~~~~~~~~---~~~~~~ 73 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRC-----------LMEN------SGYKVTCIDLK-SAGIDQSDADSVT---TFDEYN 73 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHH-----------HHHh------CCCEEEEeccc-CCCCCCCCcccCC---CHHHHH
Confidence 568999999998887777 654432 1211 13589999988 9998753322111 455556
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 159 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
+++.++|+. ... ..+++|.|+||||.-+-.++.+.-+ .++++++.++.+
T Consensus 74 ~~l~~~i~~----l~~--~~~v~lvGhS~GG~v~~~~a~~~p~-----------~v~~lv~~~~~~ 122 (273)
T PLN02211 74 KPLIDFLSS----LPE--NEKVILVGHSAGGLSVTQAIHRFPK-----------KICLAVYVAATM 122 (273)
T ss_pred HHHHHHHHh----cCC--CCCEEEEEECchHHHHHHHHHhChh-----------heeEEEEecccc
Confidence 555555543 221 3589999999999976666643211 277888876643
No 59
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.04 E-value=0.0056 Score=58.97 Aligned_cols=126 Identities=13% Similarity=0.111 Sum_probs=77.0
Q ss_pred CceEEEEEEeecCCCCCCCceEeecCCCCh---hh-hhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcC
Q 011965 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGC---SS-IAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVG 139 (474)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~---SS-~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtG 139 (474)
..++|.|+++... +..+|+||.+.|-.+- +. + +..+.+ .|. ..-.+++-+|.| |.|
T Consensus 9 ~g~~~~~~~~p~~-~~~~~~VlllHG~g~~~~~~~~~-~~~la~-----------~La------~~Gy~Vl~~Dl~-G~G 68 (266)
T TIGR03101 9 HGFRFCLYHPPVA-VGPRGVVIYLPPFAEEMNKSRRM-VALQAR-----------AFA------AGGFGVLQIDLY-GCG 68 (266)
T ss_pred CCcEEEEEecCCC-CCCceEEEEECCCcccccchhHH-HHHHHH-----------HHH------HCCCEEEEECCC-CCC
Confidence 3568898887543 2337999999985331 11 1 111111 111 123689999977 999
Q ss_pred cCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEe
Q 011965 140 FSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMI 219 (474)
Q Consensus 140 fS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~i 219 (474)
.|...... . +.....+|+..+++ |++... ..+++|+|+|.||..+..+|.+. +-.++++++
T Consensus 69 ~S~g~~~~-~---~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~-----------p~~v~~lVL 129 (266)
T TIGR03101 69 DSAGDFAA-A---RWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPL-----------AAKCNRLVL 129 (266)
T ss_pred CCCCcccc-C---CHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhC-----------ccccceEEE
Confidence 98653221 1 33444566555433 444332 35899999999999988777442 123788999
Q ss_pred eccccCccc
Q 011965 220 GNAVINDPT 228 (474)
Q Consensus 220 gng~~dp~~ 228 (474)
.+|.++...
T Consensus 130 ~~P~~~g~~ 138 (266)
T TIGR03101 130 WQPVVSGKQ 138 (266)
T ss_pred eccccchHH
Confidence 998877543
No 60
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.86 E-value=0.0048 Score=50.34 Aligned_cols=66 Identities=32% Similarity=0.375 Sum_probs=58.0
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
..+||+.+|..|.++|+.+.+...+.|. +-..+++.++||-+....-..+.++++
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~ 88 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVD 88 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-------------------------CceEEEEeccCcceecCCChHHHHHHH
Confidence 4999999999999999999999999995 567799999999998755567889999
Q ss_pred HHHcCCCCCCC
Q 011965 462 KFLSAATLPSA 472 (474)
Q Consensus 462 ~fl~~~~~~~~ 472 (474)
+|+..-.+|..
T Consensus 89 ~yl~~G~lP~~ 99 (103)
T PF08386_consen 89 DYLLDGTLPAD 99 (103)
T ss_pred HHHHcCCCCCC
Confidence 99988877753
No 61
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.58 E-value=0.031 Score=54.15 Aligned_cols=52 Identities=19% Similarity=0.137 Sum_probs=34.1
Q ss_pred HHHHHHHHH-CCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 163 AFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 163 ~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
+.|..++.. ++ ....+++|+|.|+||.-+-.+|.+- . -.+++++..+|+.++
T Consensus 123 ~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~----p-------~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 123 QELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKN----P-------DRFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhC----c-------ccceEEEEECCccCc
Confidence 333344443 33 3445799999999998766666431 1 126889998988775
No 62
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.45 E-value=0.012 Score=54.69 Aligned_cols=117 Identities=14% Similarity=0.029 Sum_probs=60.6
Q ss_pred CCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCcc----CC
Q 011965 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHK----LG 153 (474)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~----~~ 153 (474)
....|+|++|.|+++.++. +..-.+ +. .+.. ..-..||..|.| |.|.+.. .-++.. ..
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~~-----~~----~~a~-----~~g~~Vv~Pd~~-g~~~~~~--~~~~~~~~~~~~ 71 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDWG-----WK----AAAD-----RYGFVLVAPEQT-SYNSSNN--CWDWFFTHHRAR 71 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-HhhhcC-----hH----HHHH-----hCCeEEEecCCc-CccccCC--CCCCCCccccCC
Confidence 4568999999999987765 321100 00 0100 022467777765 4332211 000000 00
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 154 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
......++.+++....++++ ....+++|+|.|.||..+-.+|.+ +. -.++++++.+|..
T Consensus 72 ~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~---~p--------~~~~~~~~~~g~~ 130 (212)
T TIGR01840 72 GTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCT---YP--------DVFAGGASNAGLP 130 (212)
T ss_pred CCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHh---Cc--------hhheEEEeecCCc
Confidence 01123344445554444443 334579999999999876666543 21 1267777777653
No 63
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.35 E-value=0.042 Score=54.57 Aligned_cols=144 Identities=15% Similarity=0.179 Sum_probs=92.9
Q ss_pred EeeEEecCCCCceEEEEEEeecCC-C-CCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccc-cCcceE
Q 011965 54 AGYVKLRPNDHKALFYWFFEAQKG-V-SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-KAANML 130 (474)
Q Consensus 54 sGyl~v~~~~~~~lFy~~~es~~~-~-~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~-~~anll 130 (474)
+.-++++ ....++-+.|..... + ..+|+||++.||=-|-+.. + ....++--++. ..+|.+
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~------------~---~~~y~~~~~~~a~~~~~v 125 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA------------N---SPAYDSFCTRLAAELNCV 125 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC------------C---CchhHHHHHHHHHHcCeE
Confidence 3344443 456799999987643 3 6899999999996665531 0 01112222232 455666
Q ss_pred EEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHH-HHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCC
Q 011965 131 FLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIG-WFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKD 209 (474)
Q Consensus 131 fiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~ 209 (474)
-|= ++|=.+ +...++. .-++.-+.+..++.+ |.+..-+.+ .++|+|.|-||..+-.+|.++.+.. -
T Consensus 126 vvS----VdYRLA-PEh~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~-----~ 192 (336)
T KOG1515|consen 126 VVS----VDYRLA-PEHPFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK-----L 192 (336)
T ss_pred EEe----cCcccC-CCCCCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc-----C
Confidence 553 555443 2333443 333444455566666 888766654 3999999999999999999998753 1
Q ss_pred ceeeeeeeEeeccccCcc
Q 011965 210 SFINLKGFMIGNAVINDP 227 (474)
Q Consensus 210 ~~inLkGi~igng~~dp~ 227 (474)
..+.|+|+++.-|++...
T Consensus 193 ~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 193 SKPKIKGQILIYPFFQGT 210 (336)
T ss_pred CCcceEEEEEEecccCCC
Confidence 358899999999887654
No 64
>PLN02442 S-formylglutathione hydrolase
Probab=96.26 E-value=0.015 Score=56.77 Aligned_cols=47 Identities=15% Similarity=0.013 Sum_probs=35.7
Q ss_pred CCeEEEEecCCCCCCChh-HHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccc
Q 011965 382 GLRIWVYSGDTDGRVPVT-STRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVP 449 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~-Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP 449 (474)
+.+|++.+|+.|.+|+.. .++.+.+.++=.+ . +.++..+.|++|-..
T Consensus 217 ~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g--------------------~-~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 217 SATILIDQGEADKFLKEQLLPENFEEACKEAG--------------------A-PVTLRLQPGYDHSYF 264 (283)
T ss_pred CCCEEEEECCCCccccccccHHHHHHHHHHcC--------------------C-CeEEEEeCCCCccHH
Confidence 689999999999999974 4666666663111 1 688899999999765
No 65
>PRK10566 esterase; Provisional
Probab=96.25 E-value=0.021 Score=54.09 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=48.0
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
..++|+.+|..|.++|...++...+.++=.+.. . +++++++.|+||... | ..++.+.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~------------------~-~~~~~~~~~~~H~~~---~-~~~~~~~ 242 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLD------------------K-NLTCLWEPGVRHRIT---P-EALDAGV 242 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC------------------c-ceEEEecCCCCCccC---H-HHHHHHH
Confidence 478999999999999999999988888533221 1 589999999999974 3 3566666
Q ss_pred HHHcC
Q 011965 462 KFLSA 466 (474)
Q Consensus 462 ~fl~~ 466 (474)
+||..
T Consensus 243 ~fl~~ 247 (249)
T PRK10566 243 AFFRQ 247 (249)
T ss_pred HHHHh
Confidence 77764
No 66
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.19 E-value=0.015 Score=55.00 Aligned_cols=108 Identities=24% Similarity=0.396 Sum_probs=76.0
Q ss_pred CCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHH
Q 011965 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (474)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a 158 (474)
..-|+++.+.|| |.|.|+|..|.- .+..+- ..-++-+| -=|.|=+..++..+. +-+..+
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~~-----~~r~~a~D-lRgHGeTk~~~e~dl---S~eT~~ 130 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS-----------ELKSKI-----RCRCLALD-LRGHGETKVENEDDL---SLETMS 130 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH-----------HHHhhc-----ceeEEEee-ccccCccccCChhhc---CHHHHH
Confidence 456899999988 999998877652 111110 01236688 669999988877764 778899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeec
Q 011965 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (474)
Q Consensus 159 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~ign 221 (474)
+|+...++.+|..-| .++.|.|+|.||-...+.|. . + .--+|.|+.+.+
T Consensus 131 KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~----~-k-----~lpsl~Gl~viD 179 (343)
T KOG2564|consen 131 KDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAA----S-K-----TLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHhccCC----CceEEEeccccchhhhhhhh----h-h-----hchhhhceEEEE
Confidence 999999999885433 37999999999977655442 1 1 123588888765
No 67
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.09 E-value=0.036 Score=51.15 Aligned_cols=104 Identities=20% Similarity=0.241 Sum_probs=65.1
Q ss_pred CCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHH
Q 011965 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (474)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d 160 (474)
.|.++++.|+|+++.. +....+..+ .... + .+++.+|+| |.|.|. .. .+ .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~~~~-----------~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFKVLP-----------ALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHHHhh-----------cccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6699999999999998 654111111 1100 1 799999999 999997 11 11 22222444
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccC
Q 011965 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (474)
Q Consensus 161 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~d 225 (474)
+..++ +... ..++.+.|+|+||..+-.++.+..+ .++++++.++...
T Consensus 78 ~~~~~----~~~~---~~~~~l~G~S~Gg~~~~~~~~~~p~-----------~~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALL----DALG---LEKVVLVGHSMGGAVALALALRHPD-----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHH----HHhC---CCceEEEEecccHHHHHHHHHhcch-----------hhheeeEecCCCC
Confidence 44444 4322 2349999999997766666654433 3778888877665
No 68
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.02 E-value=0.03 Score=53.84 Aligned_cols=129 Identities=17% Similarity=0.108 Sum_probs=83.9
Q ss_pred CCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCc
Q 011965 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSY 142 (474)
Q Consensus 63 ~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~ 142 (474)
.|..+|.-++.-...++.+-+|+...|.=+-||.. |.+.- -+++..| .-+--+|+. |.|.|.
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~---~~~~a-~~l~~~g-------------~~v~a~D~~-GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWR---YQSTA-KRLAKSG-------------FAVYAIDYE-GHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhh---HHHHH-HHHHhCC-------------CeEEEeecc-CCCcCC
Confidence 36688887776655567788888888876655431 22211 1122222 235678877 999997
Q ss_pred ccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecc
Q 011965 143 TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNA 222 (474)
Q Consensus 143 ~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng 222 (474)
+.. .|.. +-+.+.+|...|+..+-. ..+++..|.|++|||.||--+-.++.+ .. --..|+++..|
T Consensus 98 Gl~--~yi~-~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k----~p-------~~w~G~ilvaP 162 (313)
T KOG1455|consen 98 GLH--AYVP-SFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALK----DP-------NFWDGAILVAP 162 (313)
T ss_pred CCc--ccCC-cHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhh----CC-------cccccceeeec
Confidence 543 3444 677788888887776554 457778899999999999665555543 11 22677777776
Q ss_pred cc
Q 011965 223 VI 224 (474)
Q Consensus 223 ~~ 224 (474)
+.
T Consensus 163 mc 164 (313)
T KOG1455|consen 163 MC 164 (313)
T ss_pred cc
Confidence 64
No 69
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.01 E-value=0.0085 Score=58.16 Aligned_cols=114 Identities=13% Similarity=0.116 Sum_probs=68.0
Q ss_pred CCCCCceEeecCCCChh-hhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHH
Q 011965 78 VSSKPLVLWLNGGPGCS-SIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQV 156 (474)
Q Consensus 78 ~~~~PlilWlnGGPG~S-S~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~ 156 (474)
..++|++|++.|-.|.. .. |-.. + .+.+.-....|+|.||-+-+..-.|.. . ..+...
T Consensus 33 ~~~~p~vilIHG~~~~~~~~-~~~~--------------l-~~~ll~~~~~nVi~vD~~~~~~~~y~~---a--~~~~~~ 91 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEES-WISD--------------L-RKAYLSRGDYNVIVVDWGRGANPNYPQ---A--VNNTRV 91 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCc-HHHH--------------H-HHHHHhcCCCEEEEEECccccccChHH---H--HHhHHH
Confidence 34578999999987765 23 2100 0 000111135799999966431111110 0 013445
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 157 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
+++++.++|+...+.. .....+++|+|+|.||+-+-.+|.+.-+ .++.|+..+|..
T Consensus 92 v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~-----------~v~~iv~LDPa~ 147 (275)
T cd00707 92 VGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG-----------KLGRITGLDPAG 147 (275)
T ss_pred HHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC-----------ccceeEEecCCc
Confidence 6777777777766543 2234579999999999998888865522 378888877653
No 70
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.90 E-value=0.018 Score=61.72 Aligned_cols=130 Identities=18% Similarity=0.166 Sum_probs=77.2
Q ss_pred CCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccc-cCcceEEEeCCCCcCcC
Q 011965 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-KAANMLFLEAPVGVGFS 141 (474)
Q Consensus 63 ~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~-~~anllfiDqPvGtGfS 141 (474)
.|..|+...|.-. +....|+||.++|--..+....+. +. ....-|. +-..+|-+|.+ |.|.|
T Consensus 5 DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~~~~--~~-------------~~~~~l~~~Gy~vv~~D~R-G~g~S 67 (550)
T TIGR00976 5 DGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLRWGL--DK-------------TEPAWFVAQGYAVVIQDTR-GRGAS 67 (550)
T ss_pred CCCEEEEEEEecC-CCCCCCEEEEecCCCCchhhcccc--cc-------------ccHHHHHhCCcEEEEEecc-ccccC
Confidence 3567887766432 244689999998654333210000 00 0001121 34689999955 99999
Q ss_pred cccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeec
Q 011965 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (474)
Q Consensus 142 ~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~ign 221 (474)
...... + + ...++|+.++|. |+.+.|. .+.++.++|.||||...-.+|.. . .-.|++++..+
T Consensus 68 ~g~~~~-~---~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---~--------~~~l~aiv~~~ 129 (550)
T TIGR00976 68 EGEFDL-L---G-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---Q--------PPALRAIAPQE 129 (550)
T ss_pred CCceEe-c---C-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---C--------CCceeEEeecC
Confidence 754221 1 2 334566666554 6665553 34589999999999765555531 1 13499999999
Q ss_pred cccCcc
Q 011965 222 AVINDP 227 (474)
Q Consensus 222 g~~dp~ 227 (474)
++.|..
T Consensus 130 ~~~d~~ 135 (550)
T TIGR00976 130 GVWDLY 135 (550)
T ss_pred cccchh
Confidence 887643
No 71
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.53 E-value=0.021 Score=57.40 Aligned_cols=63 Identities=21% Similarity=0.162 Sum_probs=50.7
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEc-CCeeccccCChHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVR-GAGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~-~AGHmvP~dqP~~a~~~i 460 (474)
..++|+..|..|.++|....+...+.+. .. .-..+|+.|. ++||+++.++|+...+.|
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~--~~-------------------~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP--AA-------------------GLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh--hc-------------------CCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 6899999999999999998888777774 00 0023455564 899999999999999999
Q ss_pred HHHHc
Q 011965 461 TKFLS 465 (474)
Q Consensus 461 ~~fl~ 465 (474)
.+|+.
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99984
No 72
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.29 E-value=0.064 Score=54.77 Aligned_cols=65 Identities=12% Similarity=0.072 Sum_probs=54.0
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcC-CeeccccCChHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRG-AGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~-AGHmvP~dqP~~a~~~i 460 (474)
..+||+..|+.|.++|....+...+.+.=.+ .+.+++.|.+ +||+.+.++|+.....|
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~---------------------~~a~l~~I~s~~GH~~~le~p~~~~~~I 381 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQKQG---------------------KYAEVYEIESINGHMAGVFDIHLFEKKI 381 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC---------------------CCeEEEEECCCCCcchhhcCHHHHHHHH
Confidence 7999999999999999987777766663100 1678888985 99999999999999999
Q ss_pred HHHHcCC
Q 011965 461 TKFLSAA 467 (474)
Q Consensus 461 ~~fl~~~ 467 (474)
.+|+..+
T Consensus 382 ~~FL~~~ 388 (389)
T PRK06765 382 YEFLNRK 388 (389)
T ss_pred HHHHccc
Confidence 9999753
No 73
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=95.16 E-value=0.88 Score=48.29 Aligned_cols=85 Identities=9% Similarity=0.005 Sum_probs=52.1
Q ss_pred cceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhc
Q 011965 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRA 206 (474)
Q Consensus 127 anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 206 (474)
..++-||- .|-|.|....+ -++-+.+.+.++|..+.+.. ...+++++|.|.||..+...+.......
T Consensus 221 f~V~~iDw-rgpg~s~~~~~------~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~--- 287 (532)
T TIGR01838 221 HTVFVISW-RNPDASQADKT------FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARG--- 287 (532)
T ss_pred cEEEEEEC-CCCCcccccCC------hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhC---
Confidence 46777884 47777643211 12233345666666666544 3568999999999998766333332221
Q ss_pred CCCceeeeeeeEeeccccCcc
Q 011965 207 GKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 207 ~~~~~inLkGi~igng~~dp~ 227 (474)
..-.++++++.+..+|..
T Consensus 288 ---~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 288 ---DDKRIKSATFFTTLLDFS 305 (532)
T ss_pred ---CCCccceEEEEecCcCCC
Confidence 012388988888888764
No 74
>PRK10115 protease 2; Provisional
Probab=94.78 E-value=0.084 Score=58.03 Aligned_cols=143 Identities=14% Similarity=0.022 Sum_probs=76.0
Q ss_pred eEEecCCCCceEEEEEEeecC--CCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccC-cceEEE
Q 011965 56 YVKLRPNDHKALFYWFFEAQK--GVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKA-ANMLFL 132 (474)
Q Consensus 56 yl~v~~~~~~~lFy~~~es~~--~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~-anllfi 132 (474)
.+.+....|..+-.|++-.+. .....|+||+..||||.|.. .++..+. .+|... .-+++.
T Consensus 418 ~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~-p~f~~~~----------------~~l~~rG~~v~~~ 480 (686)
T PRK10115 418 HLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASID-ADFSFSR----------------LSLLDRGFVYAIV 480 (686)
T ss_pred EEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC-CCccHHH----------------HHHHHCCcEEEEE
Confidence 333433345666665544322 23456999999999999965 2332222 122222 122333
Q ss_pred eCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCcee
Q 011965 133 EAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFI 212 (474)
Q Consensus 133 DqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~i 212 (474)
.-==|+||-..=...+... .-..+-+|+.+...-...+ +--....+.|.|-||||..+-.++. ++.+
T Consensus 481 n~RGs~g~G~~w~~~g~~~-~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~---~~Pd-------- 547 (686)
T PRK10115 481 HVRGGGELGQQWYEDGKFL-KKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAIN---QRPE-------- 547 (686)
T ss_pred EcCCCCccCHHHHHhhhhh-cCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHh---cChh--------
Confidence 3222445543211100000 0012355666666544433 3333457999999999986554442 1112
Q ss_pred eeeeeEeeccccCccc
Q 011965 213 NLKGFMIGNAVINDPT 228 (474)
Q Consensus 213 nLkGi~igng~~dp~~ 228 (474)
-++.++.+.|++|...
T Consensus 548 lf~A~v~~vp~~D~~~ 563 (686)
T PRK10115 548 LFHGVIAQVPFVDVVT 563 (686)
T ss_pred heeEEEecCCchhHhh
Confidence 2999999999998764
No 75
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=94.63 E-value=0.013 Score=59.17 Aligned_cols=81 Identities=23% Similarity=0.260 Sum_probs=53.3
Q ss_pred CcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhh
Q 011965 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (474)
Q Consensus 126 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (474)
-..||=||-| |||+|.... + + ++...++..+..|+...|+.-...+.++|-|.||.|++.+|.-=.++
T Consensus 218 GiA~LtvDmP-G~G~s~~~~---l---~--~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R--- 285 (411)
T PF06500_consen 218 GIAMLTVDMP-GQGESPKWP---L---T--QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR--- 285 (411)
T ss_dssp T-EEEEE--T-TSGGGTTT----S------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT---
T ss_pred CCEEEEEccC-CCcccccCC---C---C--cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc---
Confidence 3479999988 999985321 1 1 11234666777888889988888899999999999999998522222
Q ss_pred cCCCceeeeeeeEeeccccCc
Q 011965 206 AGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 206 ~~~~~~inLkGi~igng~~dp 226 (474)
|||++.-.|.++.
T Consensus 286 --------lkavV~~Ga~vh~ 298 (411)
T PF06500_consen 286 --------LKAVVALGAPVHH 298 (411)
T ss_dssp ---------SEEEEES---SC
T ss_pred --------eeeEeeeCchHhh
Confidence 8887777766543
No 76
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=94.48 E-value=0.27 Score=50.76 Aligned_cols=81 Identities=14% Similarity=0.111 Sum_probs=52.9
Q ss_pred CcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhh
Q 011965 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (474)
Q Consensus 126 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (474)
..|||-+|-| |-|-|.-..... +...+|+++.+||+...... .+.-.+++|.|+|.||+-+-.+|.+.-
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a~~----~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p----- 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTSAA----YTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK----- 141 (442)
T ss_pred CCEEEEEECC-CcCCCCCccccc----cHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC-----
Confidence 4799999977 444332111111 34567888888887655433 244468999999999998777665321
Q ss_pred cCCCceeeeeeeEeeccc
Q 011965 206 AGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 206 ~~~~~~inLkGi~igng~ 223 (474)
-.|.+|++.+|.
T Consensus 142 ------~rV~rItgLDPA 153 (442)
T TIGR03230 142 ------HKVNRITGLDPA 153 (442)
T ss_pred ------cceeEEEEEcCC
Confidence 237788888874
No 77
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.30 E-value=0.29 Score=47.06 Aligned_cols=125 Identities=15% Similarity=0.189 Sum_probs=71.0
Q ss_pred CceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcc-----eEEEeC----
Q 011965 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAAN-----MLFLEA---- 134 (474)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~an-----llfiDq---- 134 (474)
+...-||+|.-..-++..||||.|.|+=|...- +-++. .|++.|+ |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~~~~s-------------------g~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-QLHGT-------------------GWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH-hhccc-------------------chhhhhcccCcEEECcCccccc
Confidence 456788988876677888999999999777654 22222 2333322 233321
Q ss_pred --CCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCcee
Q 011965 135 --PVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFI 212 (474)
Q Consensus 135 --PvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~i 212 (474)
|-+.|=++...+.. .+.+.+-.+.+.+.....+| ......+||+|=|=||..+-.++-.- ++
T Consensus 104 wn~~~~~~~~~p~~~~----~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~---p~-------- 167 (312)
T COG3509 104 WNANGCGNWFGPADRR----RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEY---PD-------- 167 (312)
T ss_pred cCCCcccccCCccccc----CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcC---cc--------
Confidence 33444443322111 11122333333333333434 22345799999999998776666432 22
Q ss_pred eeeeeEeecccc
Q 011965 213 NLKGFMIGNAVI 224 (474)
Q Consensus 213 nLkGi~igng~~ 224 (474)
-+.+|++..|..
T Consensus 168 ~faa~A~VAg~~ 179 (312)
T COG3509 168 IFAAIAPVAGLL 179 (312)
T ss_pred cccceeeeeccc
Confidence 278888888877
No 78
>PLN00021 chlorophyllase
Probab=94.08 E-value=0.14 Score=50.54 Aligned_cols=116 Identities=15% Similarity=0.114 Sum_probs=69.1
Q ss_pred CCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHH
Q 011965 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT 157 (474)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~ 157 (474)
..+.|+|+++.|+.+.+.. |..+.+. +. +| -..++.+|.+ | ++... . . .+.+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~~-----------La----s~--G~~VvapD~~-g--~~~~~---~-~--~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQH-----------IA----SH--GFIVVAPQLY-T--LAGPD---G-T--DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHHH-----------HH----hC--CCEEEEecCC-C--cCCCC---c-h--hhHHH
Confidence 4568999999999877665 5443321 11 11 1356666644 2 32111 1 1 23344
Q ss_pred HHHHHHHHHHHHHH-CC---CCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 158 ANDSYAFLIGWFKR-FP---NFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 158 a~d~~~fL~~f~~~-fp---~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
+.++.+++.+-++. .| +....+++|+|+|.||..+-.+|.+..+.. ....+++++..+|+...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~------~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS------LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc------cccceeeEEeecccccc
Confidence 66666776664432 12 233357999999999998888876543221 12468999988887654
No 79
>PRK10162 acetyl esterase; Provisional
Probab=93.83 E-value=0.14 Score=50.78 Aligned_cols=65 Identities=9% Similarity=0.097 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
+.+.+.++++.+....+. ...+++.|+|+|.||+.+..++.++.+... ....++|+++..|+++.
T Consensus 133 ~D~~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~-----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQI-----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCC-----CccChhheEEECCccCC
Confidence 344555556655554432 224579999999999999999877655421 12457889998888764
No 80
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=93.12 E-value=0.37 Score=44.86 Aligned_cols=103 Identities=17% Similarity=0.215 Sum_probs=66.3
Q ss_pred ceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHH
Q 011965 83 LVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSY 162 (474)
Q Consensus 83 lilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~ 162 (474)
-||++-+|=|+++. |--|... +..+ ..++..|+.| |-+ . + ..... +-++.|+...
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~~-----------l~~~------~~~v~~i~~~-~~~--~--~-~~~~~-si~~la~~y~ 56 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLARA-----------LPDD------VIGVYGIEYP-GRG--D--D-EPPPD-SIEELASRYA 56 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHHH-----------HTTT------EEEEEEECST-TSC--T--T-SHEES-SHHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHHh-----------CCCC------eEEEEEEecC-CCC--C--C-CCCCC-CHHHHHHHHH
Confidence 46788877675555 5333321 1110 3578888855 665 1 1 11111 6677777766
Q ss_pred HHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 163 AFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 163 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
+.|+. ..|+ .|++|+|.|+||..+=.+|.++.++. .....+++.++..
T Consensus 57 ~~I~~---~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G--------~~v~~l~liD~~~ 104 (229)
T PF00975_consen 57 EAIRA---RQPE---GPYVLAGWSFGGILAFEMARQLEEAG--------EEVSRLILIDSPP 104 (229)
T ss_dssp HHHHH---HTSS---SSEEEEEETHHHHHHHHHHHHHHHTT---------SESEEEEESCSS
T ss_pred HHhhh---hCCC---CCeeehccCccHHHHHHHHHHHHHhh--------hccCceEEecCCC
Confidence 66544 4443 39999999999999999999888863 5588899988653
No 81
>PRK11460 putative hydrolase; Provisional
Probab=92.89 E-value=0.19 Score=47.34 Aligned_cols=62 Identities=16% Similarity=0.097 Sum_probs=47.0
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
+.+|++.+|..|.++|....+...+.|+=.+ . +.++.++.++||.+..+.-+.+.+.|.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g--------------------~-~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLG--------------------G-DVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCC--------------------C-CeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 5789999999999999999988888874111 1 678888999999997554445555555
Q ss_pred HHH
Q 011965 462 KFL 464 (474)
Q Consensus 462 ~fl 464 (474)
+++
T Consensus 207 ~~l 209 (232)
T PRK11460 207 YTV 209 (232)
T ss_pred HHc
Confidence 554
No 82
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=92.71 E-value=0.18 Score=42.92 Aligned_cols=94 Identities=20% Similarity=0.249 Sum_probs=59.0
Q ss_pred ceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHH
Q 011965 83 LVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSY 162 (474)
Q Consensus 83 lilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~ 162 (474)
+||++.|+-|.+.. +..+.+ .+.. +-.+++.+|.| |.|-+.. ...+++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~-----------~l~~------~G~~v~~~~~~-~~~~~~~-----------~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE-----------ALAE------QGYAVVAFDYP-GHGDSDG-----------ADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH-----------HHHH------TTEEEEEESCT-TSTTSHH-----------SHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH-----------HHHH------CCCEEEEEecC-CCCccch-----------hHHHHHHH
Confidence 58999999887666 555544 1111 13578888866 6665511 12333433
Q ss_pred HHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 163 AFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 163 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
+.+. ...+ ..++++|+|.|.||..+..++.+- -.++++++.+|+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~------------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN------------PRVKAVVLLSPY 94 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS------------TTESEEEEESES
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc------------cceeEEEEecCc
Confidence 3332 3333 356899999999999877777622 238899988884
No 83
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=92.64 E-value=0.88 Score=43.90 Aligned_cols=119 Identities=18% Similarity=0.215 Sum_probs=76.7
Q ss_pred CCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCC----CCccCChHH
Q 011965 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSE----DLHKLGDQV 156 (474)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~----~~~~~~~~~ 156 (474)
+++++|+-|-||.-.. |--|.+ .|..+- +....++=|.. .|+|...... ....++-++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISH---AGHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecC---CCCcCCcccccccCCCCccCHHH
Confidence 6899999999999998 876664 232221 34556666662 4555543331 111227777
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 157 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
..+.-.+||+++....+ ..+.+++|.|+|=|+. |+.+|+++.. +...+++++++.=|.+.-
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGay----i~levl~r~~----~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAY----IALEVLKRLP----DLKFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHH----HHHHHHHhcc----ccCCceeEEEEeCCcccc
Confidence 88888999999998664 2356899999999875 5555555532 123566777666665543
No 84
>PRK10566 esterase; Provisional
Probab=92.39 E-value=0.22 Score=47.09 Aligned_cols=109 Identities=13% Similarity=0.137 Sum_probs=62.9
Q ss_pred EEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCC
Q 011965 68 FYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSE 147 (474)
Q Consensus 68 Fy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~ 147 (474)
+|-++++...+...|+||.+.|++|.... +..+.. .+.. +-..++.+|.| |.|-|+.....
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~-----------~l~~------~G~~v~~~d~~-g~G~~~~~~~~ 74 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYFAV-----------ALAQ------AGFRVIMPDAP-MHGARFSGDEA 74 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccch-HHHHHH-----------HHHh------CCCEEEEecCC-cccccCCCccc
Confidence 44444553333457999999999887765 432221 1111 22578899966 77765432211
Q ss_pred C-C---ccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHH
Q 011965 148 D-L---HKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAE 197 (474)
Q Consensus 148 ~-~---~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 197 (474)
. . +. ......+|+..++ .++...+.....+++|+|+|+||..+..++.
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 75 RRLNHFWQ-ILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred cchhhHHH-HHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 1 0 00 1123345554444 4444444445568999999999998887764
No 85
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.16 E-value=6.8 Score=36.86 Aligned_cols=59 Identities=19% Similarity=0.194 Sum_probs=48.2
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
..+|.++.|+.|..|...-...|-+..+ + .+++- +...|||-..+|.+++...|.
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~-~f~l~-~fdGgHFfl~~~~~~v~~~i~ 230 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------G-DFTLR-VFDGGHFFLNQQREEVLARLE 230 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------C-CceEE-EecCcceehhhhHHHHHHHHH
Confidence 6899999999999999987777776653 2 56655 556899999999999998888
Q ss_pred HHHc
Q 011965 462 KFLS 465 (474)
Q Consensus 462 ~fl~ 465 (474)
+.+.
T Consensus 231 ~~l~ 234 (244)
T COG3208 231 QHLA 234 (244)
T ss_pred HHhh
Confidence 8774
No 86
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=91.93 E-value=0.38 Score=53.35 Aligned_cols=136 Identities=19% Similarity=0.124 Sum_probs=75.8
Q ss_pred ceEEEEEEeecC--CCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCccccc-CcceEEEeCCCCcCcC
Q 011965 65 KALFYWFFEAQK--GVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGFS 141 (474)
Q Consensus 65 ~~lFy~~~es~~--~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~-~anllfiDqPvGtGfS 141 (474)
-...+++...++ +.+.-||+++.-||||+-+.. +. + .+.-|++.+.. -+=++.|| +-|+|+.
T Consensus 508 ~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~~------~-------~~~~~~~~~s~~g~~v~~vd-~RGs~~~ 572 (755)
T KOG2100|consen 508 ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-SK------F-------SVDWNEVVVSSRGFAVLQVD-GRGSGGY 572 (755)
T ss_pred EEEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-ee------E-------EecHHHHhhccCCeEEEEEc-CCCcCCc
Confidence 345566555443 234679999999999933321 10 1 12223333322 35678899 8888875
Q ss_pred cccC-CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEee
Q 011965 142 YTNN-SEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIG 220 (474)
Q Consensus 142 ~~~~-~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~ig 220 (474)
=-.- ..-+..+++. ..+|....++.+.+.+ ..-...+.|+|-||||.. +..++.... .--+|--+..
T Consensus 573 G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~----t~~~l~~~~------~~~fkcgvav 640 (755)
T KOG2100|consen 573 GWDFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYL----TLKLLESDP------GDVFKCGVAV 640 (755)
T ss_pred chhHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHHH----HHHHhhhCc------CceEEEEEEe
Confidence 3221 0011111322 3456666777776665 333446999999999954 444444421 1235555777
Q ss_pred ccccCcc
Q 011965 221 NAVINDP 227 (474)
Q Consensus 221 ng~~dp~ 227 (474)
+|++|..
T Consensus 641 aPVtd~~ 647 (755)
T KOG2100|consen 641 APVTDWL 647 (755)
T ss_pred cceeeee
Confidence 7777654
No 87
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=91.74 E-value=1.7 Score=43.54 Aligned_cols=129 Identities=14% Similarity=0.116 Sum_probs=69.8
Q ss_pred CceEEEEEEeecCCCCCCCceEeecCCCChhhhh-h------hhhhhc-CCeEEcCCCCcccccCcccccCcceEEEeCC
Q 011965 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIA-Y------GAAQEL-GPFLVGGNGSRLKFNKYSWNKAANMLFLEAP 135 (474)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~-~------g~~~e~-GP~~i~~~~~~l~~N~~SW~~~anllfiDqP 135 (474)
+..++|.-+... +....|.|+.+.|=.|++-.. + |.+... ||-+ .+. .+...||-+|.|
T Consensus 15 ~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~------~l~------~~~~~vi~~D~~ 81 (351)
T TIGR01392 15 DVRVAYETYGTL-NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGR------AID------TDRYFVVCSNVL 81 (351)
T ss_pred CceEEEEecccc-CCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCC------CcC------CCceEEEEecCC
Confidence 457888766431 123467899999877755331 0 011100 1100 000 134689999977
Q ss_pred CC--cCcCcccC----CCCC----ccCChHHHHHHHHHHHHHHHHHCCCCCCCC-eEEeccccccccHHHHHHHHHHHhh
Q 011965 136 VG--VGFSYTNN----SEDL----HKLGDQVTANDSYAFLIGWFKRFPNFKSHD-FYIAGESYAGHYVPQLAELIHERNI 204 (474)
Q Consensus 136 vG--tGfS~~~~----~~~~----~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvP~lA~~i~~~n~ 204 (474)
| .|-|-..+ ...+ ...+-++.++++.++++. . . -.+ ++|+|+|+||..+-.+|.+--+
T Consensus 82 -G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l-~--~~~~~~l~G~S~Gg~ia~~~a~~~p~--- 150 (351)
T TIGR01392 82 -GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH----L-G--IEQIAAVVGGSMGGMQALEWAIDYPE--- 150 (351)
T ss_pred -CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH----c-C--CCCceEEEEECHHHHHHHHHHHHChH---
Confidence 7 55442211 0001 111344555555555543 2 2 234 9999999999877777754322
Q ss_pred hcCCCceeeeeeeEeecccc
Q 011965 205 RAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 205 ~~~~~~~inLkGi~igng~~ 224 (474)
.++++++.++..
T Consensus 151 --------~v~~lvl~~~~~ 162 (351)
T TIGR01392 151 --------RVRAIVVLATSA 162 (351)
T ss_pred --------hhheEEEEccCC
Confidence 288899888754
No 88
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.19 E-value=0.44 Score=46.50 Aligned_cols=60 Identities=17% Similarity=0.147 Sum_probs=47.6
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
..+||+..|-.+--++..-......... +..+..+.+|||+|..|+|+.....|.
T Consensus 253 ~~pvlfi~g~~S~fv~~~~~~~~~~~fp-------------------------~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 253 TGPVLFIKGLQSKFVPDEHYPRMEKIFP-------------------------NVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred ccceeEEecCCCCCcChhHHHHHHHhcc-------------------------chheeecccCCceeecCCHHHHHHHHH
Confidence 6889999999888887765444443332 566777888999999999999999999
Q ss_pred HHHcC
Q 011965 462 KFLSA 466 (474)
Q Consensus 462 ~fl~~ 466 (474)
+|+..
T Consensus 308 ~Fl~~ 312 (315)
T KOG2382|consen 308 EFLEE 312 (315)
T ss_pred HHhcc
Confidence 99863
No 89
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=90.91 E-value=0.4 Score=44.55 Aligned_cols=59 Identities=20% Similarity=0.316 Sum_probs=41.7
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
+.+|++.+|+.|.++|....+...+.|+=.+. +++|.++.|.||-++ .+.+..+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~---------------------~v~~~~~~g~gH~i~----~~~~~~~~ 209 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGA---------------------NVEFHEYPGGGHEIS----PEELRDLR 209 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT----------------------GEEEEEETT-SSS------HHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCC---------------------CEEEEEcCCCCCCCC----HHHHHHHH
Confidence 58999999999999999988887777741111 689999999999986 35556667
Q ss_pred HHHc
Q 011965 462 KFLS 465 (474)
Q Consensus 462 ~fl~ 465 (474)
+||.
T Consensus 210 ~~l~ 213 (216)
T PF02230_consen 210 EFLE 213 (216)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7765
No 90
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=90.70 E-value=0.81 Score=48.23 Aligned_cols=39 Identities=21% Similarity=0.206 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHH
Q 011965 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLA 196 (474)
Q Consensus 157 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 196 (474)
+....++++++-...|.. ..+++.|+|+|.||+-+-.++
T Consensus 156 D~~~al~wv~~~i~~fgg-d~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 156 DQRLALKWVQDNIAAFGG-DPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHHHhCC-CcceEEEEeecHHHHHhhhHh
Confidence 445567788888777753 345799999999998665544
No 91
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=90.09 E-value=0.84 Score=44.11 Aligned_cols=59 Identities=12% Similarity=-0.000 Sum_probs=49.2
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
.+++++..|..|.++|..-.+..++.+. +-..+++. +||+....+|+...++|.
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~-------------------------~~~~~~l~-~gH~p~ls~P~~~~~~i~ 264 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP-------------------------PSQVYELE-SDHSPFFSTPFLLFGLLI 264 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC-------------------------ccEEEEEC-CCCCccccCHHHHHHHHH
Confidence 5899999999999999987887777764 33556675 999999999999999998
Q ss_pred HHHcC
Q 011965 462 KFLSA 466 (474)
Q Consensus 462 ~fl~~ 466 (474)
++...
T Consensus 265 ~~a~~ 269 (273)
T PLN02211 265 KAAAS 269 (273)
T ss_pred HHHHH
Confidence 87643
No 92
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=89.97 E-value=0.88 Score=44.50 Aligned_cols=68 Identities=22% Similarity=0.298 Sum_probs=52.4
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccc--cCChHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVP--AFAPAQSLSL 459 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP--~dqP~~a~~~ 459 (474)
+.+|+||+|..|-++|+..++..++++-=.|. .+++|.++.+++|+.. ...|. ++.-
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~--------------------a~V~~~~~~~~~H~~~~~~~~~~-a~~W 277 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGG--------------------ADVEYVRYPGGGHLGAAFASAPD-ALAW 277 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCC--------------------CCEEEEecCCCChhhhhhcCcHH-HHHH
Confidence 79999999999999999999999999853331 1799999999999965 45554 4455
Q ss_pred HHHHHcCCCCC
Q 011965 460 FTKFLSAATLP 470 (474)
Q Consensus 460 i~~fl~~~~~~ 470 (474)
|++=+.|++.+
T Consensus 278 l~~rf~G~~~~ 288 (290)
T PF03583_consen 278 LDDRFAGKPAT 288 (290)
T ss_pred HHHHHCCCCCC
Confidence 55556666654
No 93
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=89.45 E-value=1.1 Score=40.98 Aligned_cols=61 Identities=25% Similarity=0.296 Sum_probs=46.2
Q ss_pred cCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHH
Q 011965 381 AGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLF 460 (474)
Q Consensus 381 ~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i 460 (474)
...++++..|..|.+.+....+.+...+.. ...++++.++||+...++|+...+.+
T Consensus 220 ~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 220 ITVPTLIIHGEDDPVVPAELARRLAAALPN------------------------DARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHhhCCC------------------------CceEEEeCCCCCcchhhcHHHHHHHH
Confidence 479999999999977776654555555531 25778899999999999999777666
Q ss_pred HHHHc
Q 011965 461 TKFLS 465 (474)
Q Consensus 461 ~~fl~ 465 (474)
..|+.
T Consensus 276 ~~~~~ 280 (282)
T COG0596 276 LAFLE 280 (282)
T ss_pred HHHHh
Confidence 66543
No 94
>PLN02454 triacylglycerol lipase
Probab=88.45 E-value=1.3 Score=45.18 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 154 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
...+.+++...|+...+++|..+- .++|+|+|-||-.+-..|..|.+... ....+++..+..|.|-+..
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~---~~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGV---SGADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhcc---cccCCceEEEEeCCCcccC
Confidence 346778999999999999987643 69999999999998888888876521 0123567778888887654
No 95
>PRK11460 putative hydrolase; Provisional
Probab=88.40 E-value=2.4 Score=39.82 Aligned_cols=37 Identities=8% Similarity=0.007 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHH
Q 011965 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAE 197 (474)
Q Consensus 160 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 197 (474)
.+.++++.+.++. ....++++|.|.|.||..+-.++.
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHH
Confidence 3444444444333 334567999999999988876664
No 96
>COG0400 Predicted esterase [General function prediction only]
Probab=88.36 E-value=0.76 Score=42.48 Aligned_cols=59 Identities=19% Similarity=0.251 Sum_probs=43.6
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
+.+|++.+|..|.+||..-+++..+.|.=.|. +..+.++. .||.++... ++.++
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~---------------------~v~~~~~~-~GH~i~~e~----~~~~~ 199 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGA---------------------DVEVRWHE-GGHEIPPEE----LEAAR 199 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCC---------------------CEEEEEec-CCCcCCHHH----HHHHH
Confidence 79999999999999999999988888742222 56656566 999997544 44445
Q ss_pred HHHcC
Q 011965 462 KFLSA 466 (474)
Q Consensus 462 ~fl~~ 466 (474)
+|+.+
T Consensus 200 ~wl~~ 204 (207)
T COG0400 200 SWLAN 204 (207)
T ss_pred HHHHh
Confidence 56654
No 97
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=88.09 E-value=1.4 Score=41.07 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=32.7
Q ss_pred HHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 164 FLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 164 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
.|.+.+......-.+.+|++|.|=||.....++..--+ -+.++++.+|..
T Consensus 83 ~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd-----------~faa~a~~sG~~ 132 (220)
T PF10503_consen 83 ALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD-----------LFAAVAVVSGVP 132 (220)
T ss_pred HHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc-----------cceEEEeecccc
Confidence 33333433334556789999999999877766653222 277888877763
No 98
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=87.98 E-value=0.97 Score=38.30 Aligned_cols=44 Identities=23% Similarity=0.329 Sum_probs=36.4
Q ss_pred hcCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeec
Q 011965 380 NAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQ 447 (474)
Q Consensus 380 ~~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHm 447 (474)
...++|++.+|..|.+++....+...++++ . .-+++.|.|++|+
T Consensus 102 ~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-----------------------~-~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 102 KIRIPVLFIHGENDPLVPPEQVRRLYEALP-----------------------G-PKELYIIPGAGHF 145 (145)
T ss_dssp TTTSEEEEEEETT-SSSHHHHHHHHHHHHC-----------------------S-SEEEEEETTS-TT
T ss_pred ccCCcEEEEEECCCCcCCHHHHHHHHHHcC-----------------------C-CcEEEEeCCCcCc
Confidence 457999999999999999999999999986 1 4677889999996
No 99
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=87.60 E-value=3 Score=42.35 Aligned_cols=131 Identities=21% Similarity=0.257 Sum_probs=81.4
Q ss_pred eeEEecCCCCceEEEEEEeecC----CCCCCCceEeecCCCChhhhh-----hhhhhhcCCeEEcCCCCcccccCccccc
Q 011965 55 GYVKLRPNDHKALFYWFFEAQK----GVSSKPLVLWLNGGPGCSSIA-----YGAAQELGPFLVGGNGSRLKFNKYSWNK 125 (474)
Q Consensus 55 Gyl~v~~~~~~~lFy~~~es~~----~~~~~PlilWlnGGPG~SS~~-----~g~~~e~GP~~i~~~~~~l~~N~~SW~~ 125 (474)
-+|...| +|.-..=|+..... +..++|+++.+-|=.|.|.-. .....+.| ++.. +-|
T Consensus 96 eii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~V------VfN------ 161 (409)
T KOG1838|consen 96 EIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRVV------VFN------ 161 (409)
T ss_pred EEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEEE------EEC------
Confidence 3444443 23344455544322 246789999999999998632 24455666 4421 122
Q ss_pred CcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhh
Q 011965 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (474)
Q Consensus 126 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (474)
+-|-|-|-.+++.-|.- +. ..|+-++++---++||+ .|+|.+|.|+||.. +.+++-+.-+
T Consensus 162 ---------~RG~~g~~LtTpr~f~a-g~---t~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~i---L~nYLGE~g~- 221 (409)
T KOG1838|consen 162 ---------HRGLGGSKLTTPRLFTA-GW---TEDLREVVNHIKKRYPQ---APLFAVGFSMGGNI---LTNYLGEEGD- 221 (409)
T ss_pred ---------CCCCCCCccCCCceeec-CC---HHHHHHHHHHHHHhCCC---CceEEEEecchHHH---HHHHhhhccC-
Confidence 77988888877765543 33 34555565555568884 69999999999975 4555544422
Q ss_pred cCCCceeeeeeeEeeccc
Q 011965 206 AGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 206 ~~~~~~inLkGi~igng~ 223 (474)
..-=..|++|-|||
T Consensus 222 ----~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 222 ----NTPLIAAVAVCNPW 235 (409)
T ss_pred ----CCCceeEEEEeccc
Confidence 12336788888888
No 100
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.36 E-value=2 Score=40.40 Aligned_cols=117 Identities=21% Similarity=0.319 Sum_probs=60.5
Q ss_pred eEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccC
Q 011965 66 ALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNN 145 (474)
Q Consensus 66 ~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~ 145 (474)
+.|=|-......-+++|+++|+-|-||-++. |--|.-. +..+-.. ++. -|+-....+ .+.|..+==+....
T Consensus 14 si~~~~~~v~~~~~~~~li~~IpGNPG~~gF-Y~~F~~~--L~~~l~~-r~~--~wtIsh~~H---~~~P~sl~~~~s~~ 84 (301)
T KOG3975|consen 14 SILTLKPWVTKSGEDKPLIVWIPGNPGLLGF-YTEFARH--LHLNLID-RLP--VWTISHAGH---ALMPASLREDHSHT 84 (301)
T ss_pred cceeeeeeeccCCCCceEEEEecCCCCchhH-HHHHHHH--HHHhccc-ccc--eeEEecccc---ccCCcccccccccc
Confidence 4454433333334789999999999999887 6555421 0001000 000 122222222 22231111111111
Q ss_pred CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHH
Q 011965 146 SEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (474)
Q Consensus 146 ~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (474)
..+. .+-++..+.=.+|++++.- +++++||.|+|=|...+ .+|+..
T Consensus 85 ~~ei--fsL~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGaYm~----Lqil~~ 130 (301)
T KOG3975|consen 85 NEEI--FSLQDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGAYMV----LQILPS 130 (301)
T ss_pred cccc--cchhhHHHHHHHHHHHhCC-----CCCEEEEEecchhHHHH----HHHhhh
Confidence 1122 1555566667788888875 46789999999986544 455554
No 101
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=86.37 E-value=1.6 Score=43.75 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=48.0
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCCh---HHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAP---AQSLS 458 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP---~~a~~ 458 (474)
..+||+.+|..|.++|....+.+.+.+. .. ..+++++ .+||+.+.+.+ +.+..
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~--~~---------------------~~~~~~~-~~gH~~~~~~~~~~~~v~~ 341 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVS--SE---------------------DYTELSF-PGGHIGIYVSGKAQKEVPP 341 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcC--CC---------------------CeEEEEc-CCCCEEEEECchhHhhhhH
Confidence 6999999999999999999998888874 11 3455544 58999988865 56778
Q ss_pred HHHHHHcC
Q 011965 459 LFTKFLSA 466 (474)
Q Consensus 459 ~i~~fl~~ 466 (474)
-|.+||..
T Consensus 342 ~i~~wl~~ 349 (350)
T TIGR01836 342 AIGKWLQA 349 (350)
T ss_pred HHHHHHHh
Confidence 88888864
No 102
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=84.16 E-value=0.9 Score=43.81 Aligned_cols=83 Identities=19% Similarity=0.126 Sum_probs=54.1
Q ss_pred cceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhc
Q 011965 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRA 206 (474)
Q Consensus 127 anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 206 (474)
.-+|.+| .=|+|-|.+.-... ....++|.++. .+|+...|- .+-.+-++|-||+|.....+|..
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~~-----~~~e~~D~~d~-I~W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~~-------- 121 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDPM-----SPNEAQDGYDT-IEWIAAQPW-SNGKVGMYGISYGGFTQWAAAAR-------- 121 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT-----SHHHHHHHHHH-HHHHHHCTT-EEEEEEEEEETHHHHHHHHHHTT--------
T ss_pred CEEEEEC-CcccccCCCccccC-----ChhHHHHHHHH-HHHHHhCCC-CCCeEEeeccCHHHHHHHHHHhc--------
Confidence 5788999 77999998764332 23345555543 456666654 34479999999999998887751
Q ss_pred CCCceeeeeeeEeeccccCccc
Q 011965 207 GKDSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 207 ~~~~~inLkGi~igng~~dp~~ 228 (474)
..-.||.|+...+..|...
T Consensus 122 ---~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 122 ---RPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---T-TTEEEEEEESE-SBTCC
T ss_pred ---CCCCceEEEecccCCcccc
Confidence 1344999999988877654
No 103
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=83.60 E-value=2.3 Score=43.03 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCC-CCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccc
Q 011965 156 VTANDSYAFLIGWFKRFPNFKS-HDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~ 228 (474)
=.|.|...+|..-.++||.... .|+.+.|.|||| |...|+.+|. +-.+.||+=-+++.-|..
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a----------P~~~~~~iDns~~~~p~l 223 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA----------PWLFDGVIDNSSYALPPL 223 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC----------ccceeEEEecCccccchh
Confidence 3678999999999999999985 799999999998 4455555552 345777777777766643
No 104
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=83.44 E-value=0.96 Score=41.94 Aligned_cols=59 Identities=12% Similarity=0.007 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccc
Q 011965 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 157 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~ 228 (474)
.++.+.++|....+.. ...++++|.|-|=||...-.++.+- +-.+.|++..+|++-+..
T Consensus 86 s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~-----------p~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 86 SAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRY-----------PEPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCT-----------SSTSSEEEEES---TTGC
T ss_pred HHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHc-----------CcCcCEEEEeeccccccc
Confidence 3444455555544432 4566899999999998877776422 235899999999986644
No 105
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=83.18 E-value=1.4 Score=49.07 Aligned_cols=89 Identities=13% Similarity=0.155 Sum_probs=54.8
Q ss_pred ccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHH----HHH------CCCCCCCCeEEeccccccccHH
Q 011965 124 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGW----FKR------FPNFKSHDFYIAGESYAGHYVP 193 (474)
Q Consensus 124 ~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f----~~~------fp~~~~~~~yi~GESYgG~yvP 193 (474)
.+-..+|++| ..|+|-|.+.-... .. .+.+...+.+++|..- ..+ --.|.+-.+-++|.||+|...-
T Consensus 277 ~rGYaVV~~D-~RGtg~SeG~~~~~-~~-~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~ 353 (767)
T PRK05371 277 PRGFAVVYVS-GIGTRGSDGCPTTG-DY-QEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPN 353 (767)
T ss_pred hCCeEEEEEc-CCCCCCCCCcCccC-CH-HHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHH
Confidence 3458899999 66999998753221 11 2333444444444320 000 1124455899999999998877
Q ss_pred HHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 194 QLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 194 ~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
.+|..- .-.||.|+-..|+.+.
T Consensus 354 ~aAa~~-----------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 354 AVATTG-----------VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHhhC-----------CCcceEEEeeCCCCcH
Confidence 666321 2349999998888764
No 106
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=83.01 E-value=2.8 Score=38.00 Aligned_cols=64 Identities=11% Similarity=0.132 Sum_probs=52.0
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 153 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
+-+++|.|+-+.|+.+.++ |+.+.+.|+|-|+|.--+|.+..++-..-.+ .++++++..+-...
T Consensus 46 tP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~-------~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALRA-------RVAQVVLLSPSTTA 109 (192)
T ss_pred CHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHHh-------heeEEEEeccCCcc
Confidence 6788999999999999984 4567899999999999999999998766433 37788877765443
No 107
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=82.13 E-value=2.5 Score=35.85 Aligned_cols=62 Identities=18% Similarity=0.239 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
...+.+.+.|++..+++| +..+.|+|+|-||-.+..+|..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~----~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS----SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT----STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc----cccceeeeecCCccc
Confidence 345567788888888887 35799999999999999999999886431 135566666666554
No 108
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=81.90 E-value=2.4 Score=43.32 Aligned_cols=53 Identities=8% Similarity=-0.062 Sum_probs=35.0
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCeE-EeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFY-IAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 153 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~y-i~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
+-.+.++++..+|+. . .-++++ |.|.|+||.-+-.+|.+--+. ++++++.++.
T Consensus 142 t~~d~~~~~~~ll~~----l---gi~~~~~vvG~SmGG~ial~~a~~~P~~-----------v~~lv~ia~~ 195 (389)
T PRK06765 142 TILDFVRVQKELIKS----L---GIARLHAVMGPSMGGMQAQEWAVHYPHM-----------VERMIGVIGN 195 (389)
T ss_pred cHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHHHHHHHHHHChHh-----------hheEEEEecC
Confidence 555566666665543 2 234565 999999998887777654333 7778887664
No 109
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=81.06 E-value=4.1 Score=35.36 Aligned_cols=44 Identities=18% Similarity=0.236 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHH
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (474)
.+++++...+++....+|. .+++|+|+|-||..+-.+|..+.++
T Consensus 9 ~~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 9 SLANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 4455566666666666674 4799999999999999999888664
No 110
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=80.82 E-value=3.7 Score=38.37 Aligned_cols=61 Identities=18% Similarity=0.257 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccC
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~d 225 (474)
...+++...++...+++|. .+++++|+|-||-.+-.+|..+.++. ...+++.+..|.|-+.
T Consensus 109 ~~~~~~~~~~~~~~~~~p~---~~i~vtGHSLGGaiA~l~a~~l~~~~------~~~~i~~~tFg~P~vg 169 (229)
T cd00519 109 SLYNQVLPELKSALKQYPD---YKIIVTGHSLGGALASLLALDLRLRG------PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHHhhCCC---ceEEEEccCHHHHHHHHHHHHHHhhC------CCCceEEEEeCCCCCC
Confidence 3444556666667776664 47999999999999988888876652 1345778888887663
No 111
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=80.61 E-value=1.2 Score=40.83 Aligned_cols=63 Identities=17% Similarity=0.297 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
+.+.+.+++|.+-...+ ++...+++|+|+|=||+.+-.++..+.+... ..++++++.+|++|.
T Consensus 50 ~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~-------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 50 EDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL-------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT-------CHESEEEEESCHSST
T ss_pred cccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc-------cchhhhhcccccccc
Confidence 33444444444432222 2335589999999999999999987777532 339999999998876
No 112
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=80.21 E-value=9.6 Score=45.33 Aligned_cols=103 Identities=12% Similarity=0.147 Sum_probs=67.5
Q ss_pred CCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHH
Q 011965 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (474)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d 160 (474)
.|-++.+.|+.|.+.. |..+.+. + .....++-+|.| |.|-+. . .. . +-++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~~-----------l-------~~~~~v~~~~~~-g~~~~~--~-~~--~-~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSRY-----------L-------DPQWSIYGIQSP-RPDGPM--Q-TA--T-SLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHHh-----------c-------CCCCcEEEEECC-CCCCCC--C-CC--C-CHHHHHHH
Confidence 4668899999888877 6655431 1 123467778877 665331 1 11 1 56777888
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 161 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
+.+.++.. .| ..|++|.|.|+||.-+-.+|.++.++. ..+..+++.+++
T Consensus 1122 ~~~~i~~~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~--------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLEQ---QP---HGPYHLLGYSLGGTLAQGIAARLRARG--------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHhh---CC---CCCEEEEEechhhHHHHHHHHHHHHcC--------CceeEEEEecCC
Confidence 77777652 23 348999999999998888888776542 236666666653
No 113
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=80.13 E-value=7.7 Score=39.92 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=25.0
Q ss_pred CeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 179 DFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 179 ~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
...|+|.|+||.-.-.+|-+--+ .+.+++..+|.+
T Consensus 289 ~~~IaG~S~GGl~AL~~al~~Pd-----------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 289 RTVVAGQSFGGLAALYAGLHWPE-----------RFGCVLSQSGSF 323 (411)
T ss_pred ceEEEEEChHHHHHHHHHHhCcc-----------cccEEEEeccce
Confidence 58999999999877776643222 267777777764
No 114
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=79.84 E-value=2.2 Score=44.25 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=46.6
Q ss_pred CChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcccccc
Q 011965 152 LGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTK 231 (474)
Q Consensus 152 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~q~~ 231 (474)
++.+++-.|+..|++.+-.++....+.|+.++|-||||..+. .+-..-.. -+.|.+--++.+....+..
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laa----w~r~kyP~-------~~~ga~ASSapv~a~~df~ 155 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAA----WFRLKYPH-------LFDGAWASSAPVQAKVDFW 155 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHH----HHHHH-TT-------T-SEEEEET--CCHCCTTT
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHH----HHHhhCCC-------eeEEEEeccceeeeecccH
Confidence 488999999999999998888766778999999999996544 33332211 1667777777776655444
Q ss_pred cc
Q 011965 232 GL 233 (474)
Q Consensus 232 ~~ 233 (474)
.|
T Consensus 156 ~y 157 (434)
T PF05577_consen 156 EY 157 (434)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 115
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=79.36 E-value=2 Score=39.52 Aligned_cols=130 Identities=21% Similarity=0.357 Sum_probs=83.8
Q ss_pred eEEecCCCCceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCC
Q 011965 56 YVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAP 135 (474)
Q Consensus 56 yl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqP 135 (474)
.+.+.....-.|-=|...+++ ++|.++.|.|--|- | |++.-+- . .+.. +=..||+.|| =
T Consensus 56 ~i~l~T~D~vtL~a~~~~~E~---S~pTlLyfh~NAGN--m--Ghr~~i~------~--~fy~-----~l~mnv~ivs-Y 114 (300)
T KOG4391|consen 56 RIELRTRDKVTLDAYLMLSES---SRPTLLYFHANAGN--M--GHRLPIA------R--VFYV-----NLKMNVLIVS-Y 114 (300)
T ss_pred EEEEEcCcceeEeeeeecccC---CCceEEEEccCCCc--c--cchhhHH------H--HHHH-----HcCceEEEEE-e
Confidence 344443223355555555433 79999999976553 2 4443221 0 0111 2346899999 4
Q ss_pred CCcCcCcccCCCC-CccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeee
Q 011965 136 VGVGFSYTNNSED-LHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINL 214 (474)
Q Consensus 136 vGtGfS~~~~~~~-~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inL 214 (474)
-|-|-|.+.+.+. .. -|.+++ .+++-..|...++++.++|.|-||.-+-.+|++-.++ +
T Consensus 115 RGYG~S~GspsE~GL~--lDs~av-------ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r-----------i 174 (300)
T KOG4391|consen 115 RGYGKSEGSPSEEGLK--LDSEAV-------LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR-----------I 174 (300)
T ss_pred eccccCCCCcccccee--ccHHHH-------HHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh-----------e
Confidence 5999998765442 22 233333 3455678889899999999999999888888655443 8
Q ss_pred eeeEeeccccCc
Q 011965 215 KGFMIGNAVIND 226 (474)
Q Consensus 215 kGi~igng~~dp 226 (474)
.++++-|-+++-
T Consensus 175 ~~~ivENTF~SI 186 (300)
T KOG4391|consen 175 SAIIVENTFLSI 186 (300)
T ss_pred eeeeeechhccc
Confidence 899999988764
No 116
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=78.71 E-value=5.2 Score=38.46 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEecccccccc
Q 011965 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHY 191 (474)
Q Consensus 154 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 191 (474)
-.++++.+.+.+.......|+=..-++||+|||-|..=
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g 122 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYG 122 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccc
Confidence 45678889999999898898876667999999987654
No 117
>PRK13604 luxD acyl transferase; Provisional
Probab=78.60 E-value=4.9 Score=39.50 Aligned_cols=47 Identities=13% Similarity=0.228 Sum_probs=39.9
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccC
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAF 451 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~d 451 (474)
+.+||+.+|+.|..||..+++...++++= + +-.+..+.||+|.....
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~s----------------------~-~kkl~~i~Ga~H~l~~~ 248 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIRS----------------------E-QCKLYSLIGSSHDLGEN 248 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhcc----------------------C-CcEEEEeCCCccccCcc
Confidence 59999999999999999999999998741 1 56778999999987543
No 118
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=78.10 E-value=2.1 Score=38.86 Aligned_cols=52 Identities=23% Similarity=0.274 Sum_probs=36.4
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccccc
Q 011965 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDT 230 (474)
Q Consensus 162 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~q~ 230 (474)
.+.+.+.++.. ....+.|.|-|-||.|+-.+|.+. +++. +|.||.+.|....
T Consensus 46 ~~~l~~~i~~~---~~~~~~liGSSlGG~~A~~La~~~-------------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 46 IAQLEQLIEEL---KPENVVLIGSSLGGFYATYLAERY-------------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred HHHHHHHHHhC---CCCCeEEEEEChHHHHHHHHHHHh-------------CCCE-EEEcCCCCHHHHH
Confidence 34445555533 234599999999999999988644 2444 8889999987543
No 119
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=77.72 E-value=4.4 Score=42.56 Aligned_cols=86 Identities=20% Similarity=0.260 Sum_probs=62.4
Q ss_pred hHHHHHHHHhcCCeEEEEecCCCCCCChhHHHHHHHHcC--CCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeecc
Q 011965 371 VLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMG--LKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQV 448 (474)
Q Consensus 371 ~~~~l~~lL~~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~--w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmv 448 (474)
.-+.|...-++|=|+|+|||..|.+++..++..+-+++. ..+.. .++-. -.-|..|.|.||-.
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~--------~~v~d-------F~RlF~vPGm~HC~ 406 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGAL--------ADVDD-------FYRLFMVPGMGHCG 406 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhccccc--------ccccc-------eeEEEecCCCcccC
Confidence 345677777889999999999999999999999988873 11110 01112 24556799999985
Q ss_pred --ccCChHHHHHHHHHHHcCCCCCC
Q 011965 449 --PAFAPAQSLSLFTKFLSAATLPS 471 (474)
Q Consensus 449 --P~dqP~~a~~~i~~fl~~~~~~~ 471 (474)
|-..|-.++..|.+|+.+..-|+
T Consensus 407 gG~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 407 GGPGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 44456678888999998766553
No 120
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=77.71 E-value=2.9 Score=38.54 Aligned_cols=43 Identities=19% Similarity=0.184 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHH
Q 011965 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (474)
Q Consensus 157 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (474)
+-.|+..+...|++.+++ +|||.|+|+|=|+..+-.|-++..+
T Consensus 76 ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred hHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhc
Confidence 445777888888988875 7899999999999877766655444
No 121
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=77.64 E-value=6.4 Score=40.59 Aligned_cols=58 Identities=10% Similarity=-0.018 Sum_probs=46.6
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
..+||+.+|..|.++|....+.+..... +..++.+.++ |+ ..+|+.++..+.
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~~-------------------------~~~l~~i~~~-~~--~e~~~~~~~~i~ 406 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSSA-------------------------DGKLLEIPFK-PV--YRNFDKALQEIS 406 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhCC-------------------------CCeEEEccCC-Cc--cCCHHHHHHHHH
Confidence 5899999999999999999997766553 5566778876 33 358999999999
Q ss_pred HHHcCC
Q 011965 462 KFLSAA 467 (474)
Q Consensus 462 ~fl~~~ 467 (474)
+||..+
T Consensus 407 ~wL~~~ 412 (414)
T PRK05077 407 DWLEDR 412 (414)
T ss_pred HHHHHH
Confidence 999643
No 122
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=77.20 E-value=3.4 Score=38.98 Aligned_cols=67 Identities=10% Similarity=0.091 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
..+..|.+||+...... ....++|.++|.|+.-+-..-..+...... ++..-.|..|++.+|-+|..
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~--~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGER--PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccc--hhhHhhhheEEEECCCCCHH
Confidence 34445555555554432 356899999999999888877777665321 01123788999999888764
No 123
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=77.02 E-value=4.9 Score=40.64 Aligned_cols=63 Identities=24% Similarity=0.271 Sum_probs=41.9
Q ss_pred CcceEEEe-------CCCCcCcCcccCC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccH
Q 011965 126 AANMLFLE-------APVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYV 192 (474)
Q Consensus 126 ~anllfiD-------qPvGtGfS~~~~~-~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 192 (474)
.|-|||++ +|.|.- ||.+.. -.|- +.+++-.|+.++|+. +++...=+..|+..+|-||||+..
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~ll~~-lK~~~~a~~~pvIafGGSYGGMLa 181 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAELLTF-LKRDLSAEASPVIAFGGSYGGMLA 181 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHHHHHH-HhhccccccCcEEEecCchhhHHH
Confidence 46788887 688877 554322 2333 677888888776654 444333345699999999999544
No 124
>COG0400 Predicted esterase [General function prediction only]
Probab=76.79 E-value=12 Score=34.59 Aligned_cols=149 Identities=15% Similarity=0.107 Sum_probs=82.2
Q ss_pred EEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCC
Q 011965 67 LFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNS 146 (474)
Q Consensus 67 lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~ 146 (474)
.|+..+++. ....+|+||||.| =|.+..+ ++ +. |-.+.++..-+..| ..+- ..+....|+.....
T Consensus 5 ~~~~~i~~~-~~p~~~~iilLHG-~Ggde~~--~~-~~-~~~~~P~~~~is~r-------G~v~--~~g~~~~f~~~~~~ 69 (207)
T COG0400 5 PFIPRIEKP-GDPAAPLLILLHG-LGGDELD--LV-PL-PELILPNATLVSPR-------GPVA--ENGGPRFFRRYDEG 69 (207)
T ss_pred cccccccCC-CCCCCcEEEEEec-CCCChhh--hh-hh-hhhcCCCCeEEcCC-------CCcc--ccCcccceeecCCC
Confidence 344434443 3456899999995 4655543 22 21 11222221111111 1111 33445555554433
Q ss_pred CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 147 EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 147 ~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
. +..-+.+..+..+.+||....+.+.-- .+++++.|-|=|+.++..+..+. +-.++|+++-+|..-+
T Consensus 70 ~-~d~edl~~~~~~~~~~l~~~~~~~gi~-~~~ii~~GfSqGA~ial~~~l~~-----------~~~~~~ail~~g~~~~ 136 (207)
T COG0400 70 S-FDQEDLDLETEKLAEFLEELAEEYGID-SSRIILIGFSQGANIALSLGLTL-----------PGLFAGAILFSGMLPL 136 (207)
T ss_pred c-cchhhHHHHHHHHHHHHHHHHHHhCCC-hhheEEEecChHHHHHHHHHHhC-----------chhhccchhcCCcCCC
Confidence 2 111144556677888888888876433 46899999999998776665432 2348899998888866
Q ss_pred ccc---cccccccccccccc
Q 011965 227 PTD---TKGLVDYAWSHAII 243 (474)
Q Consensus 227 ~~q---~~~~~~~a~~~gli 243 (474)
..+ ...-.+.+..||--
T Consensus 137 ~~~~~~~~~~~pill~hG~~ 156 (207)
T COG0400 137 EPELLPDLAGTPILLSHGTE 156 (207)
T ss_pred CCccccccCCCeEEEeccCc
Confidence 542 23334455566633
No 125
>PLN02571 triacylglycerol lipase
Probab=75.07 E-value=8.8 Score=39.22 Aligned_cols=71 Identities=10% Similarity=0.106 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhc---CCCceeeeeeeEeeccccCc
Q 011965 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRA---GKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~---~~~~~inLkGi~igng~~dp 226 (474)
..+.+++...|+.+++++|.. ..+++|+|+|-||-.+-..|..|....-.. ..+..+++..+..|.|-+..
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 356678899999999988875 347999999999999988888886531100 01123567778888877654
No 126
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=74.52 E-value=12 Score=41.54 Aligned_cols=99 Identities=13% Similarity=0.105 Sum_probs=58.0
Q ss_pred CCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCccc---------CCC--C
Q 011965 80 SKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTN---------NSE--D 148 (474)
Q Consensus 80 ~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~---------~~~--~ 148 (474)
..|+|+++.|=.|.... |-.+.+. |.. +-..+|-+|.| |.|-|... ... .
T Consensus 448 g~P~VVllHG~~g~~~~-~~~lA~~-----------La~------~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN-ALAFAGT-----------LAA------AGVATIAIDHP-LHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHH-HHHHHHH-----------HHh------CCcEEEEeCCC-CCCccccccccccccccccCccc
Confidence 35899999987777766 5433321 110 11346677755 77766221 111 1
Q ss_pred Cc--------cCChHHHHHHHHHHHHHHH------H---HCCCCCCCCeEEeccccccccHHHHHH
Q 011965 149 LH--------KLGDQVTANDSYAFLIGWF------K---RFPNFKSHDFYIAGESYAGHYVPQLAE 197 (474)
Q Consensus 149 ~~--------~~~~~~~a~d~~~fL~~f~------~---~fp~~~~~~~yi~GESYgG~yvP~lA~ 197 (474)
|- ..+-.+...|+.......- . .+..+...|+++.|+|.||.....++.
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 10 0144666777765544332 1 133355679999999999999888884
No 127
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=72.83 E-value=5.1 Score=37.15 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=35.3
Q ss_pred HHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 166 IGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 166 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
.+|++.+|+-..+++-|.|-|.||-.+-.+|.+.- .++.++..||.
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~------------~i~avVa~~ps 55 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP------------QISAVVAISPS 55 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS------------SEEEEEEES--
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC------------CccEEEEeCCc
Confidence 46888999998889999999999999888887652 37778877765
No 128
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=71.74 E-value=15 Score=32.86 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=47.2
Q ss_pred CcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhh
Q 011965 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (474)
Q Consensus 126 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (474)
...++-+|.| |.|.+... .. +.+..++.....+.. ..+ ..|+.++|+|+||..+-.+|.++.++.
T Consensus 25 ~~~v~~~~~~-g~~~~~~~-----~~-~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~-- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGEPL-----PA-SADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG-- 89 (212)
T ss_pred CccEEEecCC-CCCCCCCC-----CC-CHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC--
Confidence 3578888855 66644321 11 344455555444442 333 458999999999999988888876542
Q ss_pred cCCCceeeeeeeEeecc
Q 011965 206 AGKDSFINLKGFMIGNA 222 (474)
Q Consensus 206 ~~~~~~inLkGi~igng 222 (474)
..++++++.+.
T Consensus 90 ------~~~~~l~~~~~ 100 (212)
T smart00824 90 ------IPPAAVVLLDT 100 (212)
T ss_pred ------CCCcEEEEEcc
Confidence 23666666554
No 129
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=71.53 E-value=14 Score=35.04 Aligned_cols=106 Identities=21% Similarity=0.275 Sum_probs=67.8
Q ss_pred CCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHH
Q 011965 80 SKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAN 159 (474)
Q Consensus 80 ~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~ 159 (474)
..+.+|+..|- +.- .|.+.|+ ..+.|-.=..|++=.| =-|-|.|.+++.+. +.-++.+
T Consensus 59 ~~~~lly~hGN---a~D-lgq~~~~-------------~~~l~~~ln~nv~~~D-YSGyG~S~G~psE~----n~y~Di~ 116 (258)
T KOG1552|consen 59 AHPTLLYSHGN---AAD-LGQMVEL-------------FKELSIFLNCNVVSYD-YSGYGRSSGKPSER----NLYADIK 116 (258)
T ss_pred cceEEEEcCCc---ccc-hHHHHHH-------------HHHHhhcccceEEEEe-cccccccCCCcccc----cchhhHH
Confidence 45888888866 443 4544442 1122222345777778 44999998876654 4555666
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccC
Q 011965 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (474)
Q Consensus 160 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~d 225 (474)
..+++|++= +. +..++.|+|.|-|..=.-.+|. + -.+.|+++-+|+++
T Consensus 117 avye~Lr~~---~g--~~~~Iil~G~SiGt~~tv~Las----r---------~~~~alVL~SPf~S 164 (258)
T KOG1552|consen 117 AVYEWLRNR---YG--SPERIILYGQSIGTVPTVDLAS----R---------YPLAAVVLHSPFTS 164 (258)
T ss_pred HHHHHHHhh---cC--CCceEEEEEecCCchhhhhHhh----c---------CCcceEEEeccchh
Confidence 777777662 21 4568999999999865333332 1 12999999998875
No 130
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=71.11 E-value=11 Score=34.82 Aligned_cols=58 Identities=22% Similarity=0.256 Sum_probs=45.5
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChH--HHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPA--QSLSL 459 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~--~a~~~ 459 (474)
..+.|-.-|+.|.+++..-.+..++... + . -+..+-+||+||.-.|. .+.+.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~-----------------------~-a--~vl~HpggH~VP~~~~~~~~i~~f 216 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK-----------------------D-A--TVLEHPGGHIVPNKAKYKEKIADF 216 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC-----------------------C-C--eEEecCCCccCCCchHHHHHHHHH
Confidence 5889999999999999998888887764 1 3 36678899999988754 35566
Q ss_pred HHHHHc
Q 011965 460 FTKFLS 465 (474)
Q Consensus 460 i~~fl~ 465 (474)
|+.+++
T Consensus 217 i~~~~~ 222 (230)
T KOG2551|consen 217 IQSFLQ 222 (230)
T ss_pred HHHHHH
Confidence 666664
No 131
>PRK14567 triosephosphate isomerase; Provisional
Probab=70.96 E-value=9.9 Score=36.25 Aligned_cols=61 Identities=16% Similarity=0.258 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
.+.+++++.||++++..+-+-....+=|. |||---|.=+..|++.. ++.|+.||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~---------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP---------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC---------CCCEEEeehhhhcHH
Confidence 56788999999999976522112233333 99999999999998863 499999999998875
No 132
>PRK14566 triosephosphate isomerase; Provisional
Probab=70.39 E-value=9.3 Score=36.57 Aligned_cols=61 Identities=23% Similarity=0.373 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
.+.+++++.||++++...-......+=|. |||---|.=+..|++.. ++.|+.||..-+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~---------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP---------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC---------CCCeEEechHhcCHH
Confidence 45689999999999975421112233333 99999999999998863 499999999998874
No 133
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=68.91 E-value=14 Score=36.56 Aligned_cols=58 Identities=26% Similarity=0.363 Sum_probs=37.1
Q ss_pred cCcceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCC-CCCCCCeEEecccccccc
Q 011965 125 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFP-NFKSHDFYIAGESYAGHY 191 (474)
Q Consensus 125 ~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp-~~~~~~~yi~GESYgG~y 191 (474)
..+|++..--| |||+|.+..+ .++..++ ++.+.+++...+ .-+.+.+.+.|.|-||--
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s-------~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~V 228 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPS-------RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGV 228 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCC-------HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHH
Confidence 45899999955 9999976542 2233333 234444444333 234567999999999954
No 134
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=68.66 E-value=7.8 Score=36.76 Aligned_cols=60 Identities=20% Similarity=0.330 Sum_probs=44.6
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
.-+|||++|..|-++|+.-..+..+..+ + .....+|+||||--..--|+ -...++
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k-----------------------~-~~epl~v~g~gH~~~~~~~~-yi~~l~ 246 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK-----------------------E-KVEPLWVKGAGHNDIELYPE-YIEHLR 246 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc-----------------------c-cCCCcEEecCCCcccccCHH-HHHHHH
Confidence 5699999999999999987776666553 1 34557799999998777664 445556
Q ss_pred HHHcC
Q 011965 462 KFLSA 466 (474)
Q Consensus 462 ~fl~~ 466 (474)
+|+..
T Consensus 247 ~f~~~ 251 (258)
T KOG1552|consen 247 RFISS 251 (258)
T ss_pred HHHHH
Confidence 66653
No 135
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=68.50 E-value=18 Score=33.89 Aligned_cols=87 Identities=11% Similarity=-0.004 Sum_probs=57.3
Q ss_pred ceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcC
Q 011965 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAG 207 (474)
Q Consensus 128 nllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~ 207 (474)
+...|+-|.+.+-=..-....+.. +..+-++.+.+.|..+.. ..+++.|+|.|-|+.-+-...+++.+....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~-Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~-- 75 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDE-SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP-- 75 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccch-HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC--
Confidence 455667776443311111222333 666777788888888776 577999999999998777777777664221
Q ss_pred CCceeeeeeeEeecccc
Q 011965 208 KDSFINLKGFMIGNAVI 224 (474)
Q Consensus 208 ~~~~inLkGi~igng~~ 224 (474)
..=.++-+.+|||.-
T Consensus 76 --~~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 76 --PPDDLSFVLIGNPRR 90 (225)
T ss_pred --CcCceEEEEecCCCC
Confidence 114688999999853
No 136
>PRK11071 esterase YqiA; Provisional
Probab=68.47 E-value=12 Score=33.88 Aligned_cols=54 Identities=13% Similarity=0.145 Sum_probs=43.6
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
..+|+|.+|..|-++|+..+.+..++. ..+.+.||+|.... .+..+..+.
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~----------------------------~~~~~~ggdH~f~~--~~~~~~~i~ 185 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC----------------------------RQTVEEGGNHAFVG--FERYFNQIV 185 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc----------------------------ceEEECCCCcchhh--HHHhHHHHH
Confidence 578999999999999999888777643 23467999999833 388889999
Q ss_pred HHHc
Q 011965 462 KFLS 465 (474)
Q Consensus 462 ~fl~ 465 (474)
.|+.
T Consensus 186 ~fl~ 189 (190)
T PRK11071 186 DFLG 189 (190)
T ss_pred HHhc
Confidence 9874
No 137
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=68.26 E-value=3.4 Score=37.82 Aligned_cols=73 Identities=16% Similarity=0.074 Sum_probs=52.6
Q ss_pred CcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeee
Q 011965 137 GVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKG 216 (474)
Q Consensus 137 GtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkG 216 (474)
-+||-+++... .-+++..++.++++--++.+|.-+ .+-+.|+|=|.|.+..+..++.+ ..+.|
T Consensus 102 svgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~----------prI~g 164 (270)
T KOG4627|consen 102 SVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS----------PRIWG 164 (270)
T ss_pred EeccCcCcccc-----cHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC----------chHHH
Confidence 46776665332 467788899999888888887643 49999999999887766666422 23778
Q ss_pred eEeeccccCc
Q 011965 217 FMIGNAVIND 226 (474)
Q Consensus 217 i~igng~~dp 226 (474)
+++-+|+-+-
T Consensus 165 l~l~~GvY~l 174 (270)
T KOG4627|consen 165 LILLCGVYDL 174 (270)
T ss_pred HHHHhhHhhH
Confidence 8888887654
No 138
>COG4099 Predicted peptidase [General function prediction only]
Probab=66.43 E-value=78 Score=30.95 Aligned_cols=133 Identities=17% Similarity=0.178 Sum_probs=68.9
Q ss_pred CCCceEEEEEEeecC-CC--CCCCceEeecCCCChhh-hhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCC
Q 011965 62 NDHKALFYWFFEAQK-GV--SSKPLVLWLNGGPGCSS-IAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVG 137 (474)
Q Consensus 62 ~~~~~lFy~~~es~~-~~--~~~PlilWlnGGPG~SS-~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvG 137 (474)
+.+++|=|-+|.-.. +| +.-||+|||.|+=-.++ ..--+....|-....... +=-||=.|=
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pe--------------dqcfVlAPQ- 233 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPE--------------DQCFVLAPQ- 233 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeeccc--------------CceEEEccc-
Confidence 356789999887532 33 33499999998743333 211122223332222110 002333231
Q ss_pred cCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeee
Q 011965 138 VGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGF 217 (474)
Q Consensus 138 tGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi 217 (474)
|+..-+..+- ..+..-....+.+.+=+..+++.-.+.+|++|-|-||.-.-+++.+.-+ -+.+.
T Consensus 234 --y~~if~d~e~---~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd-----------fFAaa 297 (387)
T COG4099 234 --YNPIFADSEE---KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD-----------FFAAA 297 (387)
T ss_pred --cccccccccc---ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch-----------hhhee
Confidence 2221111110 1112223344555555556777777899999999999876666644322 26666
Q ss_pred EeeccccC
Q 011965 218 MIGNAVIN 225 (474)
Q Consensus 218 ~igng~~d 225 (474)
+..+|-=|
T Consensus 298 ~~iaG~~d 305 (387)
T COG4099 298 VPIAGGGD 305 (387)
T ss_pred eeecCCCc
Confidence 66666554
No 139
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=66.05 E-value=9.1 Score=34.16 Aligned_cols=43 Identities=26% Similarity=0.389 Sum_probs=35.4
Q ss_pred CeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccC
Q 011965 383 LRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAF 451 (474)
Q Consensus 383 irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~d 451 (474)
++.+++.++.|..||+.-++.+.+.+ +..++.+.++||+...+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l--------------------------~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRL--------------------------GAELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHH--------------------------T-EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHc--------------------------CCCeEECCCCCCccccc
Confidence 55589999999999999999999999 67889999999997654
No 140
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=65.16 E-value=15 Score=38.07 Aligned_cols=41 Identities=20% Similarity=0.102 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHH
Q 011965 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAEL 198 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 198 (474)
++..+++.+.|...++..+ .+++.|.|+|.||..+-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 4556788888888888654 5699999999999877766643
No 141
>COG4425 Predicted membrane protein [Function unknown]
Probab=63.71 E-value=16 Score=37.33 Aligned_cols=37 Identities=19% Similarity=0.438 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccc
Q 011965 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGH 190 (474)
Q Consensus 154 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 190 (474)
-.++|+.+.+.+-.+.++-|+=...++|+.|||-|..
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 3568899999999999999998777799999998764
No 142
>PRK07868 acyl-CoA synthetase; Validated
Probab=61.38 E-value=16 Score=42.27 Aligned_cols=62 Identities=15% Similarity=0.088 Sum_probs=48.9
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEE-EEEcCCeecccc---CChHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTL-VTVRGAGHQVPA---FAPAQSL 457 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf-~~V~~AGHmvP~---dqP~~a~ 457 (474)
..++|+..|..|.++|....+.+.+.+. +..+ ..+.++|||.+. .-|+...
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~-------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~w 351 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP-------------------------NAEVYESLIRAGHFGLVVGSRAAQQTW 351 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------CCeEEEEeCCCCCEeeeechhhhhhhC
Confidence 6899999999999999999998887774 4454 567899999553 4566677
Q ss_pred HHHHHHHcCCC
Q 011965 458 SLFTKFLSAAT 468 (474)
Q Consensus 458 ~~i~~fl~~~~ 468 (474)
..|.+||....
T Consensus 352 p~i~~wl~~~~ 362 (994)
T PRK07868 352 PTVADWVKWLE 362 (994)
T ss_pred hHHHHHHHHhc
Confidence 88888987543
No 143
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=60.59 E-value=8.4 Score=30.77 Aligned_cols=8 Identities=38% Similarity=0.318 Sum_probs=4.4
Q ss_pred CCCcchhH
Q 011965 1 MGSTSNCL 8 (474)
Q Consensus 1 ~~~~~~~~ 8 (474)
|+|..-.|
T Consensus 1 MaSK~~ll 8 (95)
T PF07172_consen 1 MASKAFLL 8 (95)
T ss_pred CchhHHHH
Confidence 67655333
No 144
>KOG3101 consensus Esterase D [General function prediction only]
Probab=60.13 E-value=90 Score=28.96 Aligned_cols=154 Identities=17% Similarity=0.176 Sum_probs=73.5
Q ss_pred eeEEeeEEecC----CCCceEEEEEEeecCCCC--CCCceEeecCCCChhhhh-------hhhhhhcCCeEEcCCC----
Q 011965 51 KHYAGYVKLRP----NDHKALFYWFFEAQKGVS--SKPLVLWLNGGPGCSSIA-------YGAAQELGPFLVGGNG---- 113 (474)
Q Consensus 51 ~~~sGyl~v~~----~~~~~lFy~~~es~~~~~--~~PlilWlnGGPG~SS~~-------~g~~~e~GP~~i~~~~---- 113 (474)
+.+-|+..+.. +.+-+|=|--|--...|. .-|+++||.| --|.--. --.-.++|=-.|.+|.
T Consensus 8 k~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSG-LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG 86 (283)
T KOG3101|consen 8 KCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSG-LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRG 86 (283)
T ss_pred ccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecC-CcccchhhHhhhhHHHhHhhcCeEEECCCCCCCc
Confidence 45556666532 122345555443333343 3599999984 3443210 0112234444455542
Q ss_pred CcccccCcccccCcceEEEeCCCCcCcCcccCCCCCcc-C-ChHHHHHHHHHHHHHHHHHCCCCCCCCeEEecccccccc
Q 011965 114 SRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHK-L-GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHY 191 (474)
Q Consensus 114 ~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~-~-~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 191 (474)
-.+.-.+.|| |=-.|.||=-..+.+.+.. + --+-+.+.+.+.|.. .+-.+-..+.-|+|+|.|||=
T Consensus 87 ~~v~g~~esw---------DFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~---~~~pld~~k~~IfGHSMGGhG 154 (283)
T KOG3101|consen 87 VEVAGDDESW---------DFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNS---ANVPLDPLKVGIFGHSMGGHG 154 (283)
T ss_pred cccCCCcccc---------cccCCceeEEecccchHhhhhhHHHHHHHHHHHHhcc---ccccccchhcceeccccCCCc
Confidence 1233345577 4456777743333222221 0 112233333333321 122222335899999999986
Q ss_pred HHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccc
Q 011965 192 VPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 192 vP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~ 228 (474)
+-.++.+ | .-..|++.--.|..+|..
T Consensus 155 Al~~~Lk----n-------~~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 155 ALTIYLK----N-------PSKYKSVSAFAPICNPIN 180 (283)
T ss_pred eEEEEEc----C-------cccccceeccccccCccc
Confidence 5444321 1 113566666667777654
No 145
>PLN02753 triacylglycerol lipase
Probab=60.13 E-value=23 Score=37.27 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=51.3
Q ss_pred ChHHHHHHHHHHHHHHHHHCCC--CCCCCeEEeccccccccHHHHHHHHHHHhhhc-CCCceeeeeeeEeeccccCc
Q 011965 153 GDQVTANDSYAFLIGWFKRFPN--FKSHDFYIAGESYAGHYVPQLAELIHERNIRA-GKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 153 ~~~~~a~d~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~-~~~~~inLkGi~igng~~dp 226 (474)
+...+.+++...|+.....+|. .....++|+|+|-||-.+-..|..|.+..-.. .....+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3456788999999999998874 22457999999999999988888886631100 01123556667777766643
No 146
>PLN02408 phospholipase A1
Probab=60.10 E-value=23 Score=35.65 Aligned_cols=46 Identities=11% Similarity=0.028 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHH
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (474)
.+.+++.+-|+.+++.+|... ..++|+|+|-||-.+-..|..|.+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~-~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEP-LSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCC-ceEEEeccchHHHHHHHHHHHHHHh
Confidence 456778888999999888652 3699999999999988888887654
No 147
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=59.95 E-value=20 Score=35.75 Aligned_cols=79 Identities=8% Similarity=-0.086 Sum_probs=46.9
Q ss_pred cceEEEeCCCCcCcCcccCCCCCccCChHHH-HHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhh
Q 011965 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT-ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (474)
Q Consensus 127 anllfiDqPvGtGfS~~~~~~~~~~~~~~~~-a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (474)
.+++-+|- -|-|.|.. .. +-++. ..++.+++....++.+ ..++++.|+|+||..+..++..- .
T Consensus 95 ~~V~~~D~-~g~g~s~~----~~---~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~----~- 158 (350)
T TIGR01836 95 QDVYLIDW-GYPDRADR----YL---TLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALY----P- 158 (350)
T ss_pred CeEEEEeC-CCCCHHHh----cC---CHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhC----c-
Confidence 46777784 35454421 11 22222 3345555555555554 45899999999998766554321 1
Q ss_pred cCCCceeeeeeeEeeccccCcc
Q 011965 206 AGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 206 ~~~~~~inLkGi~igng~~dp~ 227 (474)
-.++++++.++.++..
T Consensus 159 ------~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 159 ------DKIKNLVTMVTPVDFE 174 (350)
T ss_pred ------hheeeEEEeccccccC
Confidence 1278888888877754
No 148
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=59.55 E-value=53 Score=25.04 Aligned_cols=78 Identities=21% Similarity=0.234 Sum_probs=49.4
Q ss_pred ceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCccc
Q 011965 65 KALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTN 144 (474)
Q Consensus 65 ~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~ 144 (474)
.+||+..++.++ + .+.+|+.+.|--..|.- |..|.+ . |.. +-..|+-+|+. |-|.|...
T Consensus 2 ~~L~~~~w~p~~-~-~k~~v~i~HG~~eh~~r-y~~~a~---~--------L~~------~G~~V~~~D~r-GhG~S~g~ 60 (79)
T PF12146_consen 2 TKLFYRRWKPEN-P-PKAVVVIVHGFGEHSGR-YAHLAE---F--------LAE------QGYAVFAYDHR-GHGRSEGK 60 (79)
T ss_pred cEEEEEEecCCC-C-CCEEEEEeCCcHHHHHH-HHHHHH---H--------HHh------CCCEEEEECCC-cCCCCCCc
Confidence 467888776532 2 68999999977544444 554443 1 222 22478889966 99999753
Q ss_pred CCCCCccCChHHHHHHHHHHHH
Q 011965 145 NSEDLHKLGDQVTANDSYAFLI 166 (474)
Q Consensus 145 ~~~~~~~~~~~~~a~d~~~fL~ 166 (474)
.. +.. +-++..+|+..|++
T Consensus 61 rg--~~~-~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 RG--HID-SFDDYVDDLHQFIQ 79 (79)
T ss_pred cc--ccC-CHHHHHHHHHHHhC
Confidence 22 222 56677788877764
No 149
>PLN02719 triacylglycerol lipase
Probab=59.48 E-value=24 Score=36.96 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC--CCCeEEeccccccccHHHHHHHHHHHhhhc-CCCceeeeeeeEeeccccCc
Q 011965 155 QVTANDSYAFLIGWFKRFPNFK--SHDFYIAGESYAGHYVPQLAELIHERNIRA-GKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~fp~~~--~~~~yi~GESYgG~yvP~lA~~i~~~n~~~-~~~~~inLkGi~igng~~dp 226 (474)
..+.+++...|+...+.+|... ...+.|+|+|-||-.+--.|..|.+..-.. .....+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 4567789999999999998652 346999999999999998888887642110 01123455566667666543
No 150
>COG1647 Esterase/lipase [General function prediction only]
Probab=58.63 E-value=34 Score=31.84 Aligned_cols=62 Identities=21% Similarity=0.199 Sum_probs=48.9
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChH-HHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPA-QSLSLF 460 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~-~a~~~i 460 (474)
..+++|..|..|-++|..+++...+++.=.- =.+..+.++||..-.|.-. ...+.+
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~-----------------------KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVESDD-----------------------KELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccCCc-----------------------ceeEEEccCCceeecchhHHHHHHHH
Confidence 5899999999999999999999999885221 1335678999999999644 466777
Q ss_pred HHHHcC
Q 011965 461 TKFLSA 466 (474)
Q Consensus 461 ~~fl~~ 466 (474)
-+||.+
T Consensus 238 ~~FL~~ 243 (243)
T COG1647 238 ITFLEK 243 (243)
T ss_pred HHHhhC
Confidence 788753
No 151
>PLN02442 S-formylglutathione hydrolase
Probab=58.41 E-value=17 Score=35.24 Aligned_cols=57 Identities=16% Similarity=0.067 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 157 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
..+++...+..++.. ....+++|+|.|+||+-+-.+|.+- . -.+++++..+|..++.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~----p-------~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKN----P-------DKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhC----c-------hhEEEEEEECCccCcc
Confidence 344555555555543 3345789999999997666655431 1 1278899999987754
No 152
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=58.38 E-value=22 Score=33.24 Aligned_cols=39 Identities=23% Similarity=0.445 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHH
Q 011965 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (474)
Q Consensus 160 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (474)
.-.++++...+.+++ +++|+|+|=||..+-+.|..+.+.
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~ 108 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDE 108 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHH
Confidence 344677777776664 699999999999999988886554
No 153
>PLN02429 triosephosphate isomerase
Probab=58.06 E-value=21 Score=35.12 Aligned_cols=61 Identities=20% Similarity=0.400 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 155 QVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
.+.++.+.+||++|+.. +.+-....+-|. |||---|.-+..|... -+++|+.||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~---------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE---------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC---------CCCCEEEeecceecHH
Confidence 45688899999999864 433222234444 9999999999998876 3499999999998764
No 154
>PLN02802 triacylglycerol lipase
Probab=57.85 E-value=22 Score=37.20 Aligned_cols=63 Identities=8% Similarity=0.070 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
.+.+++.+-|+.+++++|.-. ..++|+|+|-||-.+-..|..|...... .+++.-+..|.|-+
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~-----~~pV~vyTFGsPRV 371 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA-----APPVAVFSFGGPRV 371 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC-----CCceEEEEcCCCCc
Confidence 456678888888888887532 3699999999999988888887654211 12344555555544
No 155
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=56.78 E-value=15 Score=33.43 Aligned_cols=55 Identities=27% Similarity=0.353 Sum_probs=38.1
Q ss_pred CcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHH
Q 011965 137 GVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELI 199 (474)
Q Consensus 137 GtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i 199 (474)
|||-|.++-+.+. ++.++|....++++. ++|+-. -+.|.|-|+|+.-+-.+|.+.
T Consensus 70 gVG~S~G~fD~Gi---GE~~Da~aaldW~~~---~hp~s~--~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 70 GVGRSQGEFDNGI---GELEDAAAALDWLQA---RHPDSA--SCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred ccccccCcccCCc---chHHHHHHHHHHHHh---hCCCch--hhhhcccchHHHHHHHHHHhc
Confidence 8999988766554 566666666555553 788743 369999999986655555544
No 156
>PRK11071 esterase YqiA; Provisional
Probab=55.52 E-value=12 Score=33.79 Aligned_cols=92 Identities=16% Similarity=0.206 Sum_probs=54.2
Q ss_pred CceEeecCCCChhhhhhh--hhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCChHHHHH
Q 011965 82 PLVLWLNGGPGCSSIAYG--AAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAN 159 (474)
Q Consensus 82 PlilWlnGGPG~SS~~~g--~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~ 159 (474)
|.||++.|-+|++.. |- .+.+. +..+- ....++.+|.| |.| ++.+
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~~-----------l~~~~----~~~~v~~~dl~-g~~---------------~~~~- 48 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKNW-----------LAQHH----PDIEMIVPQLP-PYP---------------ADAA- 48 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHHH-----------HHHhC----CCCeEEeCCCC-CCH---------------HHHH-
Confidence 679999998887776 43 12111 00000 02346777877 211 1233
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 160 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
+++.++.+... .++++|.|.|.||.++-.+|.+. + . .+++.||..+|
T Consensus 49 ---~~l~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~~-----------~--~-~~vl~~~~~~~ 95 (190)
T PRK11071 49 ---ELLESLVLEHG---GDPLGLVGSSLGGYYATWLSQCF-----------M--L-PAVVVNPAVRP 95 (190)
T ss_pred ---HHHHHHHHHcC---CCCeEEEEECHHHHHHHHHHHHc-----------C--C-CEEEECCCCCH
Confidence 34455555432 45899999999999988888542 1 1 24667887775
No 157
>PLN02324 triacylglycerol lipase
Probab=55.28 E-value=34 Score=34.99 Aligned_cols=47 Identities=11% Similarity=-0.012 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHH
Q 011965 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (474)
..+.+++..-|+.+++.+|... ..+.|+|+|-||-.+-..|..|.+.
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHh
Confidence 4567788888999999888642 3699999999999988888888764
No 158
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=54.40 E-value=13 Score=32.89 Aligned_cols=63 Identities=24% Similarity=0.350 Sum_probs=45.3
Q ss_pred CCCCceEeecCCCChhhhhhhhhhhcC----CeEEcCCCCcccccCcc--cccCcceEEEeCCCCcCcCc
Q 011965 79 SSKPLVLWLNGGPGCSSIAYGAAQELG----PFLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGFSY 142 (474)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~~~e~G----P~~i~~~~~~l~~N~~S--W~~~anllfiDqPvGtGfS~ 142 (474)
...+|=|-+.|| |||++.|.+=.+.- -..+..++.++.-.|.| +.+-+-|=|+|...|.||-.
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f 144 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVV 144 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEE
Confidence 346799999999 99998665544332 24455555555555544 77778899999999999987
No 159
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=53.76 E-value=3.2 Score=41.34 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=57.6
Q ss_pred CCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccc-cCcceEEEeCCCCcCcCcccCCCCCccCChHH
Q 011965 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQV 156 (474)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~-~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~ 156 (474)
..++|++|.+.|=-+..+.. .-+. .+..+-.... ...|||.||=-.+..-.|.. ...+...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~-~~~~------------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~-----a~~n~~~ 129 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSE-SWIQ------------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQ-----AVANTRL 129 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TT-THHH------------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHH-----HHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccch-hHHH------------HHHHHHHhhccCCceEEEEcchhhccccccc-----hhhhHHH
Confidence 45789999888755544110 1111 1222222221 46799999943333222211 0114556
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHH
Q 011965 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (474)
Q Consensus 157 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (474)
+++.+.+||+.....+ .+....+||+|+|-|+|-+-.+++++..
T Consensus 130 vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 7778888888877432 2224589999999999998888888766
No 160
>PRK04940 hypothetical protein; Provisional
Probab=52.87 E-value=20 Score=32.22 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=29.8
Q ss_pred CCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcccc
Q 011965 178 HDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTD 229 (474)
Q Consensus 178 ~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~q 229 (474)
.++.|+|-|-||.|+-.||.+- .++ -+|.||.+.|...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-------------g~~-aVLiNPAv~P~~~ 97 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-------------GIR-QVIFNPNLFPEEN 97 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-------------CCC-EEEECCCCChHHH
Confidence 4789999999999999998653 133 3678999999653
No 161
>PLN02561 triosephosphate isomerase
Probab=52.52 E-value=30 Score=33.06 Aligned_cols=60 Identities=17% Similarity=0.311 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 155 QVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
.+.++++..++++++.+ |..-....+-|. |||---|.=+..|... .++.|+.||.+-+|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~---------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ---------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC---------CCCCeEEEehHhhHH
Confidence 45678889999998853 533323344444 9999999999998776 449999999999986
No 162
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=52.51 E-value=77 Score=30.92 Aligned_cols=65 Identities=17% Similarity=0.218 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccc
Q 011965 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~ 228 (474)
+.+.+.+.++++=-..+ ....+.+.|+|+|=||+.+..++....+.. ...+++.++..|++|...
T Consensus 131 ~d~~~a~~~l~~~~~~~-g~dp~~i~v~GdSAGG~La~~~a~~~~~~~-------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 131 EDAYAAYRWLRANAAEL-GIDPSRIAVAGDSAGGHLALALALAARDRG-------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHHHHHHHHhhhHhh-CCCccceEEEecCcccHHHHHHHHHHHhcC-------CCCceEEEEEecccCCcc
Confidence 33445555554433322 122457999999999999999998887652 255889999999999875
No 163
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=51.48 E-value=8.7 Score=24.58 Aligned_cols=11 Identities=36% Similarity=1.114 Sum_probs=5.9
Q ss_pred CceEeecCCCC
Q 011965 82 PLVLWLNGGPG 92 (474)
Q Consensus 82 PlilWlnGGPG 92 (474)
-=+|||+|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 34799999998
No 164
>PLN02761 lipase class 3 family protein
Probab=51.14 E-value=45 Score=35.17 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHHHHHCCCC-C--CCCeEEeccccccccHHHHHHHHHHHhhhc--CCCceeeeeeeEeeccccCc
Q 011965 154 DQVTANDSYAFLIGWFKRFPNF-K--SHDFYIAGESYAGHYVPQLAELIHERNIRA--GKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 154 ~~~~a~d~~~fL~~f~~~fp~~-~--~~~~yi~GESYgG~yvP~lA~~i~~~n~~~--~~~~~inLkGi~igng~~dp 226 (474)
...+.+++...|+...+.+|.. + ...++|+|+|-||-.+-..|..|...+-.. .....+++.-+..|.|-+..
T Consensus 267 k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 267 SFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred chhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 3456788999999999888542 1 235999999999999888888886532110 01234556667777766543
No 165
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=50.99 E-value=35 Score=32.22 Aligned_cols=61 Identities=23% Similarity=0.287 Sum_probs=47.1
Q ss_pred CeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChH---HHHHH
Q 011965 383 LRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPA---QSLSL 459 (474)
Q Consensus 383 irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~---~a~~~ 459 (474)
.++|+.+|..|.++|....+.......= . ....+.+.+++|....+.+. .++.-
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~----------------------~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 289 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARE----------------------R-PKKLLFVPGGGHIDLYDNPPAVEQALDK 289 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhcc----------------------C-CceEEEecCCccccccCccHHHHHHHHH
Confidence 8999999999999999888777766641 0 35667788999999986555 57777
Q ss_pred HHHHHcC
Q 011965 460 FTKFLSA 466 (474)
Q Consensus 460 i~~fl~~ 466 (474)
+.+|+..
T Consensus 290 ~~~f~~~ 296 (299)
T COG1073 290 LAEFLER 296 (299)
T ss_pred HHHHHHH
Confidence 7777754
No 166
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=50.91 E-value=38 Score=32.07 Aligned_cols=60 Identities=18% Similarity=0.359 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 155 QVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
.+.+++...+|++++.. +.+ ....+-|. |||---|.=+..+++.. ++.|+.||.+.+++.
T Consensus 175 ~~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~---------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 175 PEQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP---------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC---------CCCEEEeehHhhCHH
Confidence 34578899999999964 443 33344444 99999998888887753 389999999998754
No 167
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=50.59 E-value=15 Score=33.89 Aligned_cols=49 Identities=18% Similarity=0.221 Sum_probs=32.3
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQ 455 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~ 455 (474)
.+++|...|..|.+++-..++...+... . . .-+....+||.+|...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~-----------------------~-~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD-----------------------P-D-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH-----------------------H-H-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc-----------------------C-C-cEEEEECCCCcCcCChhhc
Confidence 6999999999999999888887777763 1 3 4566888999999987653
No 168
>PLN02310 triacylglycerol lipase
Probab=50.52 E-value=34 Score=34.93 Aligned_cols=64 Identities=8% Similarity=0.011 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHCCCC-CCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccC
Q 011965 156 VTANDSYAFLIGWFKRFPNF-KSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~d 225 (474)
.+..++.+-++...+.+++- ....+.|+|+|-||-.+-..|..|.... +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~------~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI------PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC------cCcceeEEEecCCCcc
Confidence 45567777778877776532 2346999999999999877776665432 2345556666666654
No 169
>COG0627 Predicted esterase [General function prediction only]
Probab=48.84 E-value=36 Score=33.67 Aligned_cols=130 Identities=20% Similarity=0.188 Sum_probs=71.5
Q ss_pred CCCceEeecCCCChhhhhhhhhhhcCCeEEc--CCCCccccc-CcccccCcceEEEeCCCCcCcCcccCCCCCccCChHH
Q 011965 80 SKPLVLWLNGGPGCSSIAYGAAQELGPFLVG--GNGSRLKFN-KYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQV 156 (474)
Q Consensus 80 ~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~--~~~~~l~~N-~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~ 156 (474)
.+--|+|+.+|..|.-- .+...++.+=. ..+-.++-+ -.-+....++--|+ |+|.|.|+-.+-..-.. ...
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~-~~~- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW-ASG- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc-ccC-
Confidence 44556677778898842 12233333321 111112222 23355666777777 79999998543221100 111
Q ss_pred HHHHHHHHHH-----HHHHHCCCCCC-CCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 157 TANDSYAFLI-----GWFKRFPNFKS-HDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 157 ~a~d~~~fL~-----~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
..+++.||. .|.+.||.-.. ..--|+|.|.||+=+-.+|.+-.++ ++.++=-+|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~-----------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR-----------FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch-----------hceecccccccccc
Confidence 233333433 45556764331 2579999999999888888654332 66666666777665
No 170
>PLN00413 triacylglycerol lipase
Probab=48.39 E-value=21 Score=37.07 Aligned_cols=39 Identities=18% Similarity=0.284 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHH
Q 011965 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (474)
Q Consensus 160 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (474)
++.+.|++.++.+|+. +++|+|+|-||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 5667788888888854 69999999999998888776653
No 171
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=48.37 E-value=21 Score=28.31 Aligned_cols=57 Identities=16% Similarity=0.216 Sum_probs=29.4
Q ss_pred ceEeecCCCChhhhhhhhhhhc---CCeEEcCCCCcccccCcc--cccCcceEEEeCCCCcCc
Q 011965 83 LVLWLNGGPGCSSIAYGAAQEL---GPFLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGF 140 (474)
Q Consensus 83 lilWlnGGPG~SS~~~g~~~e~---GP~~i~~~~~~l~~N~~S--W~~~anllfiDqPvGtGf 140 (474)
|=|-+.|| |||++.|++=.+. +-..+..++-++.-.|.| -.+-+-|=|++...|.||
T Consensus 28 LRi~v~~g-GCsG~~Y~~~ld~~~~~D~v~~~~gv~v~vD~~s~~~l~G~~iDy~~~~~g~gF 89 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLIADEEKEGDEIEKIHDLTFLIDKNLIDQFGGFSIECAEENFGAGF 89 (92)
T ss_pred EEEEEeCC-CccCcccceEecCCCCCCEEEEeCCEEEEECHHHHHHhCCCEEEEecCCCCCcE
Confidence 88889988 9999865543322 111222222233333333 233344556666556555
No 172
>PLN02934 triacylglycerol lipase
Probab=48.20 E-value=45 Score=35.01 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHH
Q 011965 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (474)
Q Consensus 159 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (474)
.++...|+++++.+|.+ +++|+|+|-||-.+-..|..+...
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHHh
Confidence 35677788888888864 699999999999988777666543
No 173
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=48.15 E-value=56 Score=29.92 Aligned_cols=64 Identities=17% Similarity=0.255 Sum_probs=39.4
Q ss_pred cCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeecc--c---cCChHH
Q 011965 381 AGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQV--P---AFAPAQ 455 (474)
Q Consensus 381 ~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmv--P---~dqP~~ 455 (474)
...+||+..|..|..++....+...+.|+=.+. .+++.++.|++|-- + .+.++.
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~---------------------~~~~~~y~ga~HgF~~~~~~~~~~~a 202 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAGV---------------------DVEVHVYPGAGHGFANPSRPPYDPAA 202 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTTT---------------------TEEEEEETT--TTTTSTTSTT--HHH
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcCC---------------------cEEEEECCCCcccccCCCCcccCHHH
Confidence 368999999999999999998888888842222 67888899999963 2 223444
Q ss_pred ---HHHHHHHHHc
Q 011965 456 ---SLSLFTKFLS 465 (474)
Q Consensus 456 ---a~~~i~~fl~ 465 (474)
+.+-+.+|++
T Consensus 203 a~~a~~~~~~ff~ 215 (218)
T PF01738_consen 203 AEDAWQRTLAFFK 215 (218)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 4455555654
No 174
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=47.49 E-value=56 Score=32.37 Aligned_cols=56 Identities=16% Similarity=0.107 Sum_probs=37.0
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCC-hHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFA-PAQSLSLF 460 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dq-P~~a~~~i 460 (474)
..+|++-.|-.|.+||..++-...+++.= .=..+.....||..+.+. -+..+..+
T Consensus 262 ~~pvl~~~gl~D~~cPP~t~fA~yN~i~~------------------------~K~l~vyp~~~He~~~~~~~~~~~~~l 317 (320)
T PF05448_consen 262 KCPVLFSVGLQDPVCPPSTQFAAYNAIPG------------------------PKELVVYPEYGHEYGPEFQEDKQLNFL 317 (320)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHCC--S------------------------SEEEEEETT--SSTTHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCchhHHHHHhccCC------------------------CeeEEeccCcCCCchhhHHHHHHHHHH
Confidence 69999999999999999999999999851 224466888999887654 55554444
Q ss_pred H
Q 011965 461 T 461 (474)
Q Consensus 461 ~ 461 (474)
+
T Consensus 318 ~ 318 (320)
T PF05448_consen 318 K 318 (320)
T ss_dssp H
T ss_pred h
Confidence 3
No 175
>PTZ00333 triosephosphate isomerase; Provisional
Probab=47.35 E-value=40 Score=32.25 Aligned_cols=60 Identities=18% Similarity=0.365 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 155 QVTANDSYAFLIGWFK-RFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
.+.+++++.+|++++. +|.......+-|. |||---|.=+..|... -++.|+.||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~---------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ---------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC---------CCCCEEEEehHhhhh
Confidence 4568899999999886 3433323334444 9999999999998776 349999999999874
No 176
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=47.31 E-value=2.8e+02 Score=27.02 Aligned_cols=101 Identities=22% Similarity=0.297 Sum_probs=63.3
Q ss_pred CCCCCceEeecCCCChhh----hhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCC
Q 011965 78 VSSKPLVLWLNGGPGCSS----IAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLG 153 (474)
Q Consensus 78 ~~~~PlilWlnGGPG~SS----~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~ 153 (474)
.+...+|+-+.|-||+-= | --.|.|.|=. +|=|--| |-||+...+...|. +
T Consensus 32 gs~~gTVv~~hGsPGSH~DFkYi-~~~l~~~~iR---------------------~I~iN~P-Gf~~t~~~~~~~~~--n 86 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHNDFKYI-RPPLDEAGIR---------------------FIGINYP-GFGFTPGYPDQQYT--N 86 (297)
T ss_pred CCCceeEEEecCCCCCccchhhh-hhHHHHcCeE---------------------EEEeCCC-CCCCCCCCcccccC--h
Confidence 344558999999999754 2 1223333332 2334446 88887655444432 2
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 154 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
.+-..|...++..- +.. ..+.+.|+|-|+-=+-.+|... ++.|+++.||.
T Consensus 87 -----~er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~-------------~~~g~~lin~~ 136 (297)
T PF06342_consen 87 -----EERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH-------------PLHGLVLINPP 136 (297)
T ss_pred -----HHHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC-------------ccceEEEecCC
Confidence 23446777777754 233 4788889999998777777422 36799998876
No 177
>PLN02847 triacylglycerol lipase
Probab=46.79 E-value=33 Score=36.74 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=37.8
Q ss_pred ChHHHHHHHH----HHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeec
Q 011965 153 GDQVTANDSY----AFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (474)
Q Consensus 153 ~~~~~a~d~~----~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~ign 221 (474)
+--..|+.+. ..|+.-+..+|.| ++.|+|+|.||--+..++..+.++ . ...++..+..|.
T Consensus 225 Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~-~-----~fssi~CyAFgP 288 (633)
T PLN02847 225 GMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQ-K-----EFSSTTCVTFAP 288 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcC-C-----CCCCceEEEecC
Confidence 4444444444 4455556678876 699999999999877776555332 2 124556666665
No 178
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=46.76 E-value=51 Score=31.39 Aligned_cols=60 Identities=18% Similarity=0.295 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 155 QVTANDSYAFLIGWFK-RFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
.+.++++.+||++++. +|. -....+-|. |||---|.=+..+... -++.|+.||.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~---------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ---------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC---------CCCCEEEEeeeeechH
Confidence 4568889999999986 343 112234444 9999999999988776 3499999999998764
No 179
>PRK13604 luxD acyl transferase; Provisional
Probab=46.41 E-value=54 Score=32.29 Aligned_cols=125 Identities=11% Similarity=0.092 Sum_probs=67.8
Q ss_pred CCceEEEEEEeec-CCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcC
Q 011965 63 DHKALFYWFFEAQ-KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFS 141 (474)
Q Consensus 63 ~~~~lFy~~~es~-~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS 141 (474)
.|..|.=|+.+.+ +++...|+||-. -|.|+....+.-+.+ +=+.+=.++|-.|.=-|.|-|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~-HGf~~~~~~~~~~A~-----------------~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIA-SGFARRMDHFAGLAE-----------------YLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEe-CCCCCChHHHHHHHH-----------------HHHHCCCEEEEecCCCCCCCC
Confidence 3567777777654 335566766664 467775320111111 111233578888854345877
Q ss_pred cccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeec
Q 011965 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (474)
Q Consensus 142 ~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~ign 221 (474)
-++-. +........++....+|++. . ...+++|.|+|-||.-+...|. ..+++++++.+
T Consensus 80 ~G~~~-~~t~s~g~~Dl~aaid~lk~----~---~~~~I~LiG~SmGgava~~~A~-------------~~~v~~lI~~s 138 (307)
T PRK13604 80 SGTID-EFTMSIGKNSLLTVVDWLNT----R---GINNLGLIAASLSARIAYEVIN-------------EIDLSFLITAV 138 (307)
T ss_pred CCccc-cCcccccHHHHHHHHHHHHh----c---CCCceEEEEECHHHHHHHHHhc-------------CCCCCEEEEcC
Confidence 43211 11110112233333444443 2 1347999999999977533331 13489999999
Q ss_pred cccCc
Q 011965 222 AVIND 226 (474)
Q Consensus 222 g~~dp 226 (474)
|+.+-
T Consensus 139 p~~~l 143 (307)
T PRK13604 139 GVVNL 143 (307)
T ss_pred CcccH
Confidence 99884
No 180
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=46.19 E-value=31 Score=31.44 Aligned_cols=63 Identities=13% Similarity=0.223 Sum_probs=40.7
Q ss_pred ceEeecCCCChhhhhhhhhh--h----cCCeEEcCCCCcccccCcc--cccCcceEEEeCCCCcCcCcccCC
Q 011965 83 LVLWLNGGPGCSSIAYGAAQ--E----LGPFLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGFSYTNNS 146 (474)
Q Consensus 83 lilWlnGGPG~SS~~~g~~~--e----~GP~~i~~~~~~l~~N~~S--W~~~anllfiDqPvGtGfS~~~~~ 146 (474)
|=|-+.| .|||++.|++=. + -+-..+..++.++.-.|.| +.+-+-|=|+|...|.||...++.
T Consensus 25 LRI~V~~-gGCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPN 95 (192)
T PRK11190 25 IRVFVIN-PGTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPN 95 (192)
T ss_pred EEEEEEC-CCcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCC
Confidence 4444555 499986555433 1 1223444445455555544 788899999999999999986653
No 181
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=45.91 E-value=40 Score=33.01 Aligned_cols=71 Identities=11% Similarity=0.019 Sum_probs=42.0
Q ss_pred ChHHHHHHHHHHHHHHHHHCCC-CCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcccc
Q 011965 153 GDQVTANDSYAFLIGWFKRFPN-FKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTD 229 (474)
Q Consensus 153 ~~~~~a~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~q 229 (474)
+-+.+++|+..+++-+-..... +...++.|.|+|=|..=+-... .+.+.. ...-.++|+++..|+-|.+..
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl---~~~~~~---~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYL---SSPNPS---PSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHH---HH-TT------CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHH---hccCcc---ccccceEEEEEeCCCCChhHh
Confidence 6677888888777766665422 3456899999999986554443 333220 124679999999999887653
No 182
>PF03283 PAE: Pectinacetylesterase
Probab=45.47 E-value=2e+02 Score=29.10 Aligned_cols=148 Identities=20% Similarity=0.193 Sum_probs=76.5
Q ss_pred ceEEEEEEeecCCCCCCCceEeecCCCChhhhhhhhh----hhcCCeE-----EcCCC---CcccccCcccccCcceEEE
Q 011965 65 KALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAA----QELGPFL-----VGGNG---SRLKFNKYSWNKAANMLFL 132 (474)
Q Consensus 65 ~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~~----~e~GP~~-----i~~~~---~~l~~N~~SW~~~anllfi 132 (474)
..-.|++-+. .....+-+||.|+||=-|.+.. -.. .++|... +..++ ..-..||.=+ ..|+|||
T Consensus 35 S~~~yy~~~g-~g~~s~~~li~leGGG~C~~~~-tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~v 110 (361)
T PF03283_consen 35 SPPGYYFRPG-SGSGSNKWLIFLEGGGWCWDAE-TCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFV 110 (361)
T ss_pred CCCcEEEccC-CCCCCceEEEEeccchhcCChh-HHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEE
Confidence 3344444443 2345688999999998888752 332 2344221 12222 1234566322 2577888
Q ss_pred eCCCCcCcCcccCCCCCccCC--hH-HHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCC
Q 011965 133 EAPVGVGFSYTNNSEDLHKLG--DQ-VTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGK 208 (474)
Q Consensus 133 DqPvGtGfS~~~~~~~~~~~~--~~-~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~ 208 (474)
= -=+|=++.-+.......+ -- .-...+.+.|...... +++ ...+.|+|.|=||.=+..-+.+|.+.-..
T Consensus 111 p--YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~--- 183 (361)
T PF03283_consen 111 P--YCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS--- 183 (361)
T ss_pred E--ecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---
Confidence 3 344444432211100000 00 1122333444444454 554 24699999999999888888888776331
Q ss_pred CceeeeeeeEeeccccC
Q 011965 209 DSFINLKGFMIGNAVIN 225 (474)
Q Consensus 209 ~~~inLkGi~igng~~d 225 (474)
.+.++++.=..-++|
T Consensus 184 --~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 184 --SVKVKCLSDSGFFLD 198 (361)
T ss_pred --CceEEEecccccccc
Confidence 245555544443443
No 183
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=44.39 E-value=51 Score=29.61 Aligned_cols=65 Identities=20% Similarity=0.121 Sum_probs=40.6
Q ss_pred cCcceEEEeCCCC--cCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHC-CCCCCCCeEEeccccccccHHHHHHH
Q 011965 125 KAANMLFLEAPVG--VGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRF-PNFKSHDFYIAGESYAGHYVPQLAEL 198 (474)
Q Consensus 125 ~~anllfiDqPvG--tGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvP~lA~~ 198 (474)
+.|-|.|++-... ...+-. ... --...|.+|..|+..+=..+ | ...+-++|+|||..-+-.-++.
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~--~~~----~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAA--SPG----YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCcccccc--Cch----HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 7788888854433 222211 111 12456778888888876666 3 3368999999999766555443
No 184
>PLN02162 triacylglycerol lipase
Probab=44.03 E-value=30 Score=35.88 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHH
Q 011965 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (474)
Q Consensus 160 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (474)
.+.+-|+..+.++|.+ +++|+|+|-||-.+-..|..+..
T Consensus 263 ~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHH
Confidence 4556677778888754 69999999999987777665544
No 185
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=43.72 E-value=14 Score=33.37 Aligned_cols=17 Identities=35% Similarity=0.847 Sum_probs=14.0
Q ss_pred CCCCceEeecCCCChhh
Q 011965 79 SSKPLVLWLNGGPGCSS 95 (474)
Q Consensus 79 ~~~PlilWlnGGPG~SS 95 (474)
...|-|||.=|||||-=
T Consensus 5 ~~~~~IifVlGGPGsgK 21 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSGK 21 (195)
T ss_pred ccCCCEEEEEcCCCCCc
Confidence 45788999999999853
No 186
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=42.77 E-value=45 Score=33.27 Aligned_cols=59 Identities=17% Similarity=0.267 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecccc
Q 011965 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (474)
Q Consensus 159 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~ 224 (474)
..+.+-++.....+|+ ..++|+|+|-||-++...|..|...... ...+++=+.-|-|-+
T Consensus 155 ~~~~~~~~~L~~~~~~---~~i~vTGHSLGgAlA~laa~~i~~~~~~----~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN---YSIWVTGHSLGGALASLAALDLVKNGLK----TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHHhcCC---cEEEEecCChHHHHHHHHHHHHHHcCCC----CCCceEEEEecCCCc
Confidence 3455556666677774 4799999999999999999999886421 123444444444443
No 187
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=42.69 E-value=38 Score=31.40 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHh
Q 011965 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERN 203 (474)
Q Consensus 153 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 203 (474)
+-+..++.+.+.|.+.++..+.- .+++-+.|+|-||-++-.....+.+..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 44567888888888888766553 468999999999999887776666653
No 188
>PLN03037 lipase class 3 family protein; Provisional
Probab=42.45 E-value=54 Score=34.54 Aligned_cols=46 Identities=13% Similarity=0.062 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHCCCC-CCCCeEEeccccccccHHHHHHHHHHH
Q 011965 157 TANDSYAFLIGWFKRFPNF-KSHDFYIAGESYAGHYVPQLAELIHER 202 (474)
Q Consensus 157 ~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (474)
+.+++.+-|+..++.+++. ....++|+|+|-||-.+--.|..|...
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 4456777788888777643 234699999999999987777777654
No 189
>PRK14565 triosephosphate isomerase; Provisional
Probab=42.18 E-value=48 Score=31.28 Aligned_cols=54 Identities=13% Similarity=0.238 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 154 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
+.+.+++...+++++. +.+-|. |||---|.-+..+.+. -++.|+.||.+.+++.
T Consensus 172 ~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~---------~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI---------NQLSGVLVGSASLDVD 225 (237)
T ss_pred CHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC---------CCCCEEEEechhhcHH
Confidence 3456888899999873 122333 9999999999999885 3399999999999875
No 190
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=42.02 E-value=53 Score=32.66 Aligned_cols=58 Identities=19% Similarity=0.268 Sum_probs=39.3
Q ss_pred CCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeecc
Q 011965 148 DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNA 222 (474)
Q Consensus 148 ~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng 222 (474)
.++. ++..+++.+..|-.+=+ .|+..++.|.|.|-||.-+...|. ..-++|++++-.-
T Consensus 286 P~p~-n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs------------~YPdVkavvLDAt 343 (517)
T KOG1553|consen 286 PYPV-NTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAAS------------NYPDVKAVVLDAT 343 (517)
T ss_pred CCcc-cchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhh------------cCCCceEEEeecc
Confidence 4555 66666655555443322 455679999999999998888774 2467888877443
No 191
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=40.80 E-value=41 Score=35.10 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=35.3
Q ss_pred CChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccH
Q 011965 152 LGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYV 192 (474)
Q Consensus 152 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 192 (474)
.+..++-.|+.+||+..-.+|+.-.+.|+..+|-||.|...
T Consensus 146 LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLs 186 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLS 186 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHH
Confidence 47889999999999998889987766799999999999543
No 192
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=40.20 E-value=60 Score=32.15 Aligned_cols=120 Identities=22% Similarity=0.264 Sum_probs=66.7
Q ss_pred ceEEEEEEeecCCCCCCCceEeecCCCChhhhh-----hhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcC
Q 011965 65 KALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIA-----YGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVG 139 (474)
Q Consensus 65 ~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~-----~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtG 139 (474)
--.+.|.- .. .....|+++-+.|==|+|.-. ...+.+-| + .++-.+ -=|-|
T Consensus 61 ~~~ldw~~-~p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg-~--------------------~~Vv~~-~Rgcs 116 (345)
T COG0429 61 FIDLDWSE-DP-RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG-W--------------------LVVVFH-FRGCS 116 (345)
T ss_pred EEEEeecc-Cc-cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC-C--------------------eEEEEe-ccccc
Confidence 34566633 22 234569999999877776521 12333333 2 344444 33555
Q ss_pred cCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEe
Q 011965 140 FSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMI 219 (474)
Q Consensus 140 fS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~i 219 (474)
-+-...+.-|.. ++. +|+..||.....++| .+|+|.+|-|.||. ++|.++-++-+. .....++++
T Consensus 117 ~~~n~~p~~yh~-G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d-----~~~~aa~~v 181 (345)
T COG0429 117 GEANTSPRLYHS-GET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDD-----LPLDAAVAV 181 (345)
T ss_pred CCcccCcceecc-cch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccC-----cccceeeee
Confidence 443333333321 333 555555555555676 57999999999994 466677665322 233566666
Q ss_pred eccc
Q 011965 220 GNAV 223 (474)
Q Consensus 220 gng~ 223 (474)
-+|+
T Consensus 182 s~P~ 185 (345)
T COG0429 182 SAPF 185 (345)
T ss_pred eCHH
Confidence 6655
No 193
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=39.40 E-value=20 Score=36.20 Aligned_cols=59 Identities=29% Similarity=0.485 Sum_probs=35.6
Q ss_pred CCCCceEeecCCCCh--hhhhhhhhhhcCCeEEcC--CC---CcccccCcccccCcceEEEeCCCCcC
Q 011965 79 SSKPLVLWLNGGPGC--SSIAYGAAQELGPFLVGG--NG---SRLKFNKYSWNKAANMLFLEAPVGVG 139 (474)
Q Consensus 79 ~~~PlilWlnGGPG~--SS~~~g~~~e~GP~~i~~--~~---~~l~~N~~SW~~~anllfiDqPvGtG 139 (474)
++.|+=|-+.|.+|+ ||+ +=.|-++|+=.-.. .| .+....||.=-++-||.+.|-| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSf-INalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSF-INALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHH-HHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHH-HHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 457888999998877 888 78887877621110 01 2456677887888999999988 887
No 194
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=38.53 E-value=18 Score=33.54 Aligned_cols=48 Identities=19% Similarity=0.208 Sum_probs=29.1
Q ss_pred CCeEEEEecCCCCCCChhHHH-HHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeecc
Q 011965 382 GLRIWVYSGDTDGRVPVTSTR-YSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQV 448 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~-~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmv 448 (474)
+-+||+.+|..|.+.|..-.. ..++.|+=.+.. .+++.+.+.+|||+.
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~-------------------~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFP-------------------HNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCC-------------------CcceEEEcCCCCcee
Confidence 799999999999999876544 455667533321 158889999999996
No 195
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=36.64 E-value=1.8e+02 Score=30.53 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=24.9
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccccccHHHH
Q 011965 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQL 195 (474)
Q Consensus 162 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 195 (474)
++++++.++.|..=. ..+-|+|||=|++-+-.+
T Consensus 165 LkWV~~NIe~FGGDp-~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 165 LKWVRDNIEAFGGDP-QNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHHhCCCc-cceEEeeccchHHHHHHh
Confidence 577888888886543 369999999998766554
No 196
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.55 E-value=1e+02 Score=29.52 Aligned_cols=59 Identities=15% Similarity=0.084 Sum_probs=41.9
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccC
Q 011965 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (474)
Q Consensus 153 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~d 225 (474)
+-++.++.-.+.|+ +..|+ -|.+|.|.|+||.-+=.+|.++..+-. -+.-++|.+....
T Consensus 46 ~l~~~a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~--------~Va~L~llD~~~~ 104 (257)
T COG3319 46 SLDDMAAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGE--------EVAFLGLLDAVPP 104 (257)
T ss_pred CHHHHHHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCC--------eEEEEEEeccCCC
Confidence 56666666655554 46775 299999999999999999999987632 2555566555443
No 197
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=36.00 E-value=82 Score=28.22 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=50.7
Q ss_pred ceEEEeCCCCcCc-CcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHH--HHHHhh
Q 011965 128 NMLFLEAPVGVGF-SYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAEL--IHERNI 204 (474)
Q Consensus 128 nllfiDqPvGtGf-S~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~--i~~~n~ 204 (474)
++--|+-|+..+. +|. . +..+.++++...|+++..+-|+ .++.|.|-|=|+.-+-.++.. +...
T Consensus 41 ~~~~V~YpA~~~~~~y~-------~-S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA~V~~~~~~~~~l~~~-- 107 (179)
T PF01083_consen 41 AVQGVEYPASLGPNSYG-------D-SVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGAMVVGDALSGDGLPPD-- 107 (179)
T ss_dssp EEEE--S---SCGGSCH-------H-HHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHHTTSSHH--
T ss_pred EEEecCCCCCCCccccc-------c-cHHHHHHHHHHHHHHHHHhCCC---CCEEEEecccccHHHHHHHHhccCChh--
Confidence 3444666777666 332 2 6677788999999999999994 589999999999776666655 1111
Q ss_pred hcCCCceeeeee-eEeeccccCc
Q 011965 205 RAGKDSFINLKG-FMIGNAVIND 226 (474)
Q Consensus 205 ~~~~~~~inLkG-i~igng~~dp 226 (474)
..=++.+ +.+|||.-.+
T Consensus 108 -----~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 -----VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp -----HHHHEEEEEEES-TTTBT
T ss_pred -----hhhhEEEEEEecCCcccC
Confidence 1123566 5778877643
No 198
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=35.78 E-value=47 Score=29.36 Aligned_cols=29 Identities=17% Similarity=0.348 Sum_probs=23.7
Q ss_pred CCCCCCCeEEeccccccccHHHHHHHHHH
Q 011965 173 PNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (474)
Q Consensus 173 p~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (474)
-.+..-|+.|-|.||||+-..++|..+..
T Consensus 84 ~~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 84 AGLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred hcccCCceeeccccccchHHHHHHHhhcC
Confidence 35556699999999999999999977643
No 199
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=35.12 E-value=62 Score=29.42 Aligned_cols=64 Identities=11% Similarity=0.120 Sum_probs=42.3
Q ss_pred CceEeecCCCChhhhhhhhhh----hc--CCeEEcCCCCcccccC--cccccCcceEEEeCCCCcCcCcccCC
Q 011965 82 PLVLWLNGGPGCSSIAYGAAQ----EL--GPFLVGGNGSRLKFNK--YSWNKAANMLFLEAPVGVGFSYTNNS 146 (474)
Q Consensus 82 PlilWlnGGPG~SS~~~g~~~----e~--GP~~i~~~~~~l~~N~--~SW~~~anllfiDqPvGtGfS~~~~~ 146 (474)
.|=|-+.|| |||++.|++=. |. +=..+..++.++.-.+ ..+.+-+-|=|++...|.||...++.
T Consensus 23 ~LRv~V~~g-GCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NPn 94 (190)
T TIGR03341 23 GIRVFVVNP-GTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAPN 94 (190)
T ss_pred eEEEEEECC-ccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCCc
Confidence 366667764 99987555422 22 2234444554554444 44888899999999999999886643
No 200
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=35.03 E-value=54 Score=30.59 Aligned_cols=53 Identities=17% Similarity=0.081 Sum_probs=35.0
Q ss_pred HHHHHHHH-HCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 163 AFLIGWFK-RFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 163 ~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
+=|..|++ +|+-...+ ..|+|.|.||.-+-.+|.+- .+ -+.+++..+|.+++.
T Consensus 100 ~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~---Pd--------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRH---PD--------LFGAVIAFSGALDPS 153 (251)
T ss_dssp THHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHS---TT--------TESEEEEESEESETT
T ss_pred ccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhC---cc--------ccccccccCcccccc
Confidence 33344443 34433333 89999999998777666432 22 288999999988775
No 201
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=34.88 E-value=89 Score=29.47 Aligned_cols=64 Identities=23% Similarity=0.273 Sum_probs=39.2
Q ss_pred cceEEEeCCCCcCcCcccCCCCCccCCh-HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHH
Q 011965 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGD-QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQL 195 (474)
Q Consensus 127 anllfiDqPvGtGfS~~~~~~~~~~~~~-~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 195 (474)
..||-.| ==|.|=|.....+.... .- +=+..||-..|..--+.-| ..|.|..|+||||+-.=-+
T Consensus 58 f~Vlt~d-yRG~g~S~p~~~~~~~~-~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 58 FEVLTFD-YRGIGQSRPASLSGSQW-RYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred ceEEEEe-cccccCCCccccccCcc-chhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccc
Confidence 3677777 44888887654443221 22 2234466555555444455 5699999999999864433
No 202
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=34.58 E-value=3.2e+02 Score=26.28 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=32.9
Q ss_pred HHHHHHHHHH----HHHH-CCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 158 ANDSYAFLIG----WFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 158 a~d~~~fL~~----f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
|+.+.+||.+ |++. ++ ..+.+--|+|+||||-.+-. .|+++.+. +.-+.+.+|-+.+
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGGLfvl~---aLL~~p~~--------F~~y~~~SPSlWw 174 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYR-TNSERTAIIGHSLGGLFVLF---ALLTYPDC--------FGRYGLISPSLWW 174 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccc-cCcccceeeeecchhHHHHH---HHhcCcch--------hceeeeecchhhh
Confidence 4445555555 5543 32 23446899999999977543 34444222 5556666665544
No 203
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=34.22 E-value=41 Score=30.70 Aligned_cols=40 Identities=23% Similarity=0.586 Sum_probs=22.3
Q ss_pred ceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHH
Q 011965 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKR 171 (474)
Q Consensus 128 nllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~ 171 (474)
|+|++|+|-++|..+... ..+ ++....++..+++..++..
T Consensus 2 dliitDPPY~~~~~~~~~-~~~---~~~~~~~~y~~~~~~~~~~ 41 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNY-FDY---GDNKNHEEYLEWMEEWLKE 41 (231)
T ss_dssp EEEEE---TSSSCS------CS---CHCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchh-hhc---cCCCCHHHHHHHHHHHHHH
Confidence 799999999999996221 111 3334456677777777754
No 204
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=34.18 E-value=33 Score=34.91 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=22.2
Q ss_pred CeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccc
Q 011965 179 DFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 179 ~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~ 228 (474)
.+.++|+||||--+-..+. +. ..++..++.+||+-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~---~d---------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALR---QD---------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHH---H----------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHh---hc---------cCcceEEEeCCcccCCC
Confidence 5899999999965553332 22 23788889999998753
No 205
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=33.03 E-value=70 Score=34.92 Aligned_cols=61 Identities=16% Similarity=0.249 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 155 QVTANDSYAFLIGWFK-RFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
.+.+++++.||++++. +|-.-....+=|. |||---|.=+..|... -++.|+.||..-+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~---------~diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ---------PDIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC---------CCCCeEEeehHhcCHH
Confidence 5678999999999996 3432212223333 9999999999999886 3499999999998874
No 206
>PRK15492 triosephosphate isomerase; Provisional
Probab=32.63 E-value=1e+02 Score=29.61 Aligned_cols=60 Identities=17% Similarity=0.269 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 155 QVTANDSYAFLIGWFK-RFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
.+.+++..++|++++. .+.+- ...+-|. |||---|.-+..|+... ++.|+.||..-+++.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~---------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP---------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC---------CCCEEEeehhhcCHH
Confidence 4556888999999974 45332 2344554 99999999999998863 499999999998875
No 207
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=32.60 E-value=22 Score=23.90 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=23.6
Q ss_pred ccccCccccccccccccccccccCHHHHHHHHh
Q 011965 221 NAVINDPTDTKGLVDYAWSHAIISDKLYKDISK 253 (474)
Q Consensus 221 ng~~dp~~q~~~~~~~a~~~gli~~~~~~~~~~ 253 (474)
.|.+||.+-..--.+-|+..|+|+++....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 477888775544456688999999998877654
No 208
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=32.55 E-value=28 Score=26.85 Aligned_cols=12 Identities=33% Similarity=0.841 Sum_probs=8.6
Q ss_pred ceEEEeCCCCcC
Q 011965 128 NMLFLEAPVGVG 139 (474)
Q Consensus 128 nllfiDqPvGtG 139 (474)
+.|.||-|.|||
T Consensus 2 D~LiiD~PPGTg 13 (81)
T PF10609_consen 2 DYLIIDLPPGTG 13 (81)
T ss_dssp CEEEEE--SCSS
T ss_pred CEEEEeCCCCCC
Confidence 578999999998
No 209
>TIGR02011 IscA iron-sulfur cluster assembly protein IscA. This clade is limited to the proteobacteria.
Probab=32.16 E-value=38 Score=27.38 Aligned_cols=64 Identities=23% Similarity=0.451 Sum_probs=41.1
Q ss_pred CCceEeecCCCChhhhhhhhh--hhcCC--eEEcCCCCcccccC--cccccCcceEEEeCCCCcCcCcccC
Q 011965 81 KPLVLWLNGGPGCSSIAYGAA--QELGP--FLVGGNGSRLKFNK--YSWNKAANMLFLEAPVGVGFSYTNN 145 (474)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~~--~e~GP--~~i~~~~~~l~~N~--~SW~~~anllfiDqPvGtGfS~~~~ 145 (474)
.+|=|-+.+| |||++.|.+- .|..+ ..++.++.++.-.+ ..+.+-+-|=|+|.+.|.||...++
T Consensus 22 ~~lRi~v~~~-GCsG~~y~l~l~~~~~~~D~v~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~~~nP 91 (105)
T TIGR02011 22 FGLRLGVKTS-GCSGMAYVLEFVDEPTPDDIVFEDKGVKIVIDGKSLQYLDGTQLDFVKEGLNEGFKFTNP 91 (105)
T ss_pred ceEEEEEeCC-CCCCEEEEeeecCCCCCCCEEEEcCCEEEEEcHHHhHHhCCCEEEEecCCCcceEEEECC
Confidence 4567777766 9999646543 34433 23444444444333 4477888889999999999987543
No 210
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=31.95 E-value=29 Score=28.27 Aligned_cols=63 Identities=24% Similarity=0.460 Sum_probs=39.5
Q ss_pred CceEeecCCCChhhhhhhhh--hhcCC--eEEcCCCCcccccC--cccccCcceEEEeCCCCcCcCcccC
Q 011965 82 PLVLWLNGGPGCSSIAYGAA--QELGP--FLVGGNGSRLKFNK--YSWNKAANMLFLEAPVGVGFSYTNN 145 (474)
Q Consensus 82 PlilWlnGGPG~SS~~~g~~--~e~GP--~~i~~~~~~l~~N~--~SW~~~anllfiDqPvGtGfS~~~~ 145 (474)
.|=|-+. +.|||++.|.+- .|..+ ..+..++.++.-.+ ..+.+-+-|=|+|.+.|.||...++
T Consensus 25 ~LRi~v~-~~GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NP 93 (107)
T PRK09502 25 GLRLGVR-TSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNP 93 (107)
T ss_pred eEEEEEE-CCCcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECC
Confidence 4555566 459998755442 33332 33444444443333 4578888999999999999987543
No 211
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=31.85 E-value=43 Score=29.80 Aligned_cols=51 Identities=8% Similarity=0.021 Sum_probs=32.1
Q ss_pred HHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccC
Q 011965 164 FLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (474)
Q Consensus 164 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~d 225 (474)
++..+-+..... ..+.+|.|+|.|+.-+-..+. ++ ...+++|+++..|+-.
T Consensus 42 W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~---~~-------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 42 WVQALDQAIDAI-DEPTILVAHSLGCLTALRWLA---EQ-------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHH---HT-------CCSSEEEEEEES--SC
T ss_pred HHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHh---hc-------ccccccEEEEEcCCCc
Confidence 333333334443 458999999999977666554 22 1357999999999944
No 212
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=31.40 E-value=29 Score=33.59 Aligned_cols=63 Identities=22% Similarity=0.263 Sum_probs=43.6
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
+.|||+..|+.-.-. ..+...-.+|+ .++-|++.|.++|=||-.+||+...+-|+
T Consensus 219 ~c~vLlvvG~~Sp~~--~~vv~~ns~Ld-----------------------p~~ttllkv~dcGglV~eEqP~klaea~~ 273 (283)
T PF03096_consen 219 GCPVLLVVGDNSPHV--DDVVEMNSKLD-----------------------PTKTTLLKVADCGGLVLEEQPGKLAEAFK 273 (283)
T ss_dssp CS-EEEEEETTSTTH--HHHHHHHHHS------------------------CCCEEEEEETT-TT-HHHH-HHHHHHHHH
T ss_pred CCCeEEEEecCCcch--hhHHHHHhhcC-----------------------cccceEEEecccCCcccccCcHHHHHHHH
Confidence 488888888875332 22344445563 11689999999999999999999999999
Q ss_pred HHHcCCCC
Q 011965 462 KFLSAATL 469 (474)
Q Consensus 462 ~fl~~~~~ 469 (474)
-|++|..+
T Consensus 274 lFlQG~G~ 281 (283)
T PF03096_consen 274 LFLQGMGY 281 (283)
T ss_dssp HHHHHTTB
T ss_pred HHHccCCc
Confidence 99998653
No 213
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=31.18 E-value=37 Score=26.30 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHH
Q 011965 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (474)
Q Consensus 159 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (474)
-|+|++.+.|+-+| |..+.|.+.|+|| .|-+.|.+.
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyrl 42 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYRL 42 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHHH
Confidence 36788888888765 3466899999999 455555554
No 214
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=29.81 E-value=85 Score=31.09 Aligned_cols=138 Identities=12% Similarity=0.138 Sum_probs=65.2
Q ss_pred CceEEEEEEeecCCCCCCCceEeecCCCChhhhhhh---hhhhcCCeEEcCC--CCc-ccccCcccccCcceEEEeCCCC
Q 011965 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYG---AAQELGPFLVGGN--GSR-LKFNKYSWNKAANMLFLEAPVG 137 (474)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g---~~~e~GP~~i~~~--~~~-l~~N~~SW~~~anllfiDqPvG 137 (474)
+..++=|++.-++.....|.||-+.|..|.+.. +. .+...|=..+..+ |.. ....+... ..+..
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~-~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~---------~~~~~ 135 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGD-PFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGS---------SGGTL 135 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGG-HHHHHHHHHTT-EEEEE--TTTSSSS-B-SSB---------SSS-S
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCC-cccccccccCCeEEEEecCCCCCCCCCCcccc---------CCCCC
Confidence 456666666544345778999999999888665 32 2344554333222 110 00001100 11112
Q ss_pred cCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeee
Q 011965 138 VGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGF 217 (474)
Q Consensus 138 tGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi 217 (474)
-|+-.-...+...+.=-..+..|.+.. ..|+...|++-.+.+.++|+|-||...-.+|. +.++ ++.+
T Consensus 136 ~g~~~~g~~~~~e~~yyr~~~~D~~ra-vd~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~r-----------v~~~ 202 (320)
T PF05448_consen 136 KGHITRGIDDNPEDYYYRRVYLDAVRA-VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDPR-----------VKAA 202 (320)
T ss_dssp SSSTTTTTTS-TTT-HHHHHHHHHHHH-HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSST------------SEE
T ss_pred ccHHhcCccCchHHHHHHHHHHHHHHH-HHHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCcc-----------ccEE
Confidence 222211000000000001122333333 24567789998889999999999988777664 3221 6777
Q ss_pred Eeecccc
Q 011965 218 MIGNAVI 224 (474)
Q Consensus 218 ~igng~~ 224 (474)
+...|++
T Consensus 203 ~~~vP~l 209 (320)
T PF05448_consen 203 AADVPFL 209 (320)
T ss_dssp EEESESS
T ss_pred EecCCCc
Confidence 7776654
No 215
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=29.76 E-value=79 Score=30.29 Aligned_cols=65 Identities=15% Similarity=0.245 Sum_probs=40.4
Q ss_pred ChHHHHHHHHHHHHHHHH-HC-----CCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccC
Q 011965 153 GDQVTANDSYAFLIGWFK-RF-----PNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (474)
Q Consensus 153 ~~~~~a~d~~~fL~~f~~-~f-----p~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~d 225 (474)
.+.+.+.++.++|.+=++ .. |++. .+.|+|+|=||+-+-.++....+ ....++++++++.+|+=.
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s--~l~l~GHSrGGk~Af~~al~~~~------~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFS--KLALAGHSRGGKVAFAMALGNAS------SSLDLRFSALILLDPVDG 132 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhcccccccccc--ceEEeeeCCCCHHHHHHHhhhcc------cccccceeEEEEeccccc
Confidence 455666677766655222 22 3332 59999999999954444432211 123578999999998863
No 216
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=29.61 E-value=3.1e+02 Score=29.13 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=25.6
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccccccHHHHH
Q 011965 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLA 196 (474)
Q Consensus 162 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 196 (474)
.+|+++.+..|.. ..+++-|+|+|.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 5677777777763 245799999999998875544
No 217
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=29.56 E-value=1e+02 Score=28.34 Aligned_cols=55 Identities=4% Similarity=0.053 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCc
Q 011965 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp 226 (474)
.+.++++..|++ +.+ +... .+-|. |||---|.=+..+... -++.|+.||.+.+++
T Consensus 150 ~~~~~~v~~~ir-~~~---~~~~-~~~Il---YGGSV~~~N~~~l~~~---------~~iDG~LvG~Asl~a 204 (205)
T TIGR00419 150 PAQPEVVHGSVR-AVK---EVNE-SVRVL---CGAGISTGEDAELAAQ---------LGAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHHH-hhh---hhcC-CceEE---EeCCCCHHHHHHHhcC---------CCCCEEEEeeeeecC
Confidence 345778888888 222 1122 33333 9999999999998876 349999999998875
No 218
>PRK10115 protease 2; Provisional
Probab=29.21 E-value=97 Score=34.30 Aligned_cols=65 Identities=18% Similarity=0.132 Sum_probs=42.7
Q ss_pred CCe-EEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCe-EEEEEcCCeeccccCChHH--HH
Q 011965 382 GLR-IWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGL-TLVTVRGAGHQVPAFAPAQ--SL 457 (474)
Q Consensus 382 ~ir-VLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nL-tf~~V~~AGHmvP~dqP~~--a~ 457 (474)
.++ +||.+|..|..||+...+.|...|+=.+.. . ++ -|-+-.++||.....+-+. ..
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~------------------~-~~vl~~~~~~~GHg~~~~r~~~~~~~ 665 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTD------------------D-HLLLLCTDMDSGHGGKSGRFKSYEGV 665 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHHhcCCC------------------C-ceEEEEecCCCCCCCCcCHHHHHHHH
Confidence 578 678899999999999999999999522221 1 22 2222278999966655443 33
Q ss_pred HHHHHHHc
Q 011965 458 SLFTKFLS 465 (474)
Q Consensus 458 ~~i~~fl~ 465 (474)
.+.-.|+.
T Consensus 666 A~~~aFl~ 673 (686)
T PRK10115 666 AMEYAFLI 673 (686)
T ss_pred HHHHHHHH
Confidence 34444443
No 219
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=29.00 E-value=53 Score=30.61 Aligned_cols=27 Identities=19% Similarity=0.271 Sum_probs=23.0
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHc
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKM 408 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l 408 (474)
+++++|++|+.|..|+....+..+.+.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 678999999999999998877776654
No 220
>PRK09504 sufA iron-sulfur cluster assembly scaffold protein; Provisional
Probab=28.99 E-value=33 Score=28.72 Aligned_cols=64 Identities=16% Similarity=0.298 Sum_probs=40.8
Q ss_pred CCceEeecCCCChhhhhhhhh--hhcCC--eEEcCCCCcccccC--cccccCcceEEEeCCCCcCcCcccC
Q 011965 81 KPLVLWLNGGPGCSSIAYGAA--QELGP--FLVGGNGSRLKFNK--YSWNKAANMLFLEAPVGVGFSYTNN 145 (474)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~~--~e~GP--~~i~~~~~~l~~N~--~SW~~~anllfiDqPvGtGfS~~~~ 145 (474)
..|=|-+.|| |||++.|++- .|..| ..++.++..+.-.+ -.+.+-+-|=|+|.+.|.||-..++
T Consensus 39 ~~LRi~v~~g-GCsG~~Y~~~l~~e~~~~D~v~e~~g~~v~Id~~s~~~L~g~~IDy~~~~~~~gF~f~NP 108 (122)
T PRK09504 39 KGVRLGVKQT-GCAGFGYVLDSVSEPDKDDLVFEHDGAKLFVPLQAMPFIDGTEVDYVREGLNQIFKFHNP 108 (122)
T ss_pred ceEEEEEECC-CCCceEEEeeecCCCCCCCEEEEeCCEEEEEcHHHHHhhCCcEEEeecCCCcceEEEECC
Confidence 4577777755 9999766542 33333 33444444444334 3477778888999999999977543
No 221
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=28.82 E-value=67 Score=32.79 Aligned_cols=41 Identities=7% Similarity=0.076 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHH
Q 011965 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIH 200 (474)
Q Consensus 160 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 200 (474)
+++.-|+..++.--+..++++.|.|+|+||-++-.+-....
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhcc
Confidence 34444444443211222679999999999998887776663
No 222
>PRK00022 lolB outer membrane lipoprotein LolB; Provisional
Probab=28.43 E-value=95 Score=28.34 Aligned_cols=17 Identities=29% Similarity=0.422 Sum_probs=13.5
Q ss_pred hHHHHHHHHHHHHHhhh
Q 011965 7 CLLCFMLCTLLVSAVAS 23 (474)
Q Consensus 7 ~~~~~~~~~~~~~~~~~ 23 (474)
+++++++|+++|++||.
T Consensus 4 ~~~~~~~~~llL~gCa~ 20 (202)
T PRK00022 4 LLRLLLLAALLLAGCAV 20 (202)
T ss_pred hHHHHHHHHHHHHhCCC
Confidence 56777788889999973
No 223
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=28.15 E-value=52 Score=28.11 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=36.4
Q ss_pred ceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccc
Q 011965 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGES 186 (474)
Q Consensus 128 nllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GES 186 (474)
=||=|| |.||+.-...-.+..=.|....+.|.+.-+..++.+++ ..+..|+|
T Consensus 22 ivvRiD---G~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~----~~~aY~~S 73 (135)
T PF04446_consen 22 IVVRID---GRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFPD----IVLAYGQS 73 (135)
T ss_dssp EEEEEE---ETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSSS----EEEEEEET
T ss_pred EEEEEe---CcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCCC----cEEEEEcC
Confidence 478899 99999865542232216888899999999999998872 56776666
No 224
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=27.94 E-value=22 Score=33.74 Aligned_cols=61 Identities=16% Similarity=0.321 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 155 QVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
.+.++++..+|++++.. |.+-..+.+-|. |||---|.=+..+... .++.|+.||...+++.
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~---------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ---------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS---------TT-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC---------CCCCEEEEchhhhccc
Confidence 46788999999998743 311112233343 8888888878777765 3499999999999875
No 225
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=27.64 E-value=71 Score=29.83 Aligned_cols=35 Identities=11% Similarity=0.042 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHC--CCCCCCCeEEeccccccc
Q 011965 156 VTANDSYAFLIGWFKRF--PNFKSHDFYIAGESYAGH 190 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~ 190 (474)
+.++.+.+.++...+.+ ..-..+++.|.|+|.||.
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl 97 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL 97 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH
Confidence 44555566666666544 222456899999999995
No 226
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=27.39 E-value=1e+02 Score=30.44 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=54.7
Q ss_pred ecCCCCCCCceEeecCCCChhhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCccCC
Q 011965 74 AQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLG 153 (474)
Q Consensus 74 s~~~~~~~PlilWlnGGPG~SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~~~ 153 (474)
+..+....|-++-+.|==|+-=. |.-+.-+ +.. ++. +.+.=||.= -.|.|.....- +
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~N-w~sv~k~----Ls~---~l~---------~~v~~vd~R-nHG~Sp~~~~h-----~ 101 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKEN-WRSVAKN----LSR---KLG---------RDVYAVDVR-NHGSSPKITVH-----N 101 (315)
T ss_pred cccccCCCCceEEecccccCCCC-HHHHHHH----hcc---ccc---------CceEEEecc-cCCCCcccccc-----C
Confidence 33456778888888875554433 3322211 100 111 167777743 77888644332 4
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEecccccc
Q 011965 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAG 189 (474)
Q Consensus 154 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG 189 (474)
-..+|+|+..||...-. .++..+..|.|+|.||
T Consensus 102 ~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 102 YEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 56788888887766543 2445689999999999
No 227
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=26.99 E-value=1.7e+02 Score=27.91 Aligned_cols=76 Identities=21% Similarity=0.332 Sum_probs=54.3
Q ss_pred ceEEEeC--CCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccccccHHHHHHHHHHHhh
Q 011965 128 NMLFLEA--PVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNI 204 (474)
Q Consensus 128 nllfiDq--PvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 204 (474)
.+|=.++ .+|||-|- +.+.++.+..|++..... |.+- ..+-|- |||---|.=+.++..+
T Consensus 161 ~vIAYEPvWAIGTG~~a-----------t~~~a~~v~~~Ir~~~~~~~~~~--~~v~Il---YGGSV~~~N~~e~~~~-- 222 (251)
T COG0149 161 IVIAYEPVWAIGTGKSA-----------SPADAEEVHAFIRAVLAELFGAE--EKVRIL---YGGSVKPGNAAELAAQ-- 222 (251)
T ss_pred eEEEECCHHHhcCCCCC-----------CHHHHHHHHHHHHHHHHHhcCCC--CCeEEE---EeCCcChhHHHHHhcC--
Confidence 3444442 37999762 345688999999999864 5433 345554 8888888888877775
Q ss_pred hcCCCceeeeeeeEeeccccCccc
Q 011965 205 RAGKDSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 205 ~~~~~~~inLkGi~igng~~dp~~ 228 (474)
-++.|+.||++.+++..
T Consensus 223 -------~~idG~LVGgAslka~~ 239 (251)
T COG0149 223 -------PDIDGALVGGASLKADD 239 (251)
T ss_pred -------CCCCeEEEcceeecchh
Confidence 45999999999988753
No 228
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=26.92 E-value=50 Score=23.55 Aligned_cols=23 Identities=13% Similarity=0.268 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCC
Q 011965 155 QVTANDSYAFLIGWFKRFPNFKS 177 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~fp~~~~ 177 (474)
.+.-+++++.|+.|++.||+|-.
T Consensus 4 aeiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 4 AEIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred ccccHHHHHHHHHHHHcCCCchH
Confidence 34567899999999999999964
No 229
>PRK06762 hypothetical protein; Provisional
Probab=26.85 E-value=34 Score=29.85 Aligned_cols=15 Identities=20% Similarity=0.574 Sum_probs=12.6
Q ss_pred CceEeecCCCCh--hhh
Q 011965 82 PLVLWLNGGPGC--SSI 96 (474)
Q Consensus 82 PlilWlnGGPG~--SS~ 96 (474)
|.++|+.|.||| |.+
T Consensus 2 ~~li~i~G~~GsGKST~ 18 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTI 18 (166)
T ss_pred CeEEEEECCCCCCHHHH
Confidence 789999999998 445
No 230
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=25.48 E-value=1.4e+02 Score=19.42 Aligned_cols=27 Identities=15% Similarity=0.385 Sum_probs=13.4
Q ss_pred eEEEEEEeecCCCCCCCceEeecCCCC
Q 011965 66 ALFYWFFEAQKGVSSKPLVLWLNGGPG 92 (474)
Q Consensus 66 ~lFy~~~es~~~~~~~PlilWlnGGPG 92 (474)
+-+|||-.+........--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 566776444333333334445555664
No 231
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=25.47 E-value=1.1e+02 Score=28.29 Aligned_cols=39 Identities=21% Similarity=0.388 Sum_probs=24.4
Q ss_pred eEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEec
Q 011965 129 MLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAG 184 (474)
Q Consensus 129 llfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~G 184 (474)
=|+|| | |+||+ .+.+.+..+.+.|+.|-..+ ..|+.+.|
T Consensus 165 ~Ii~D-P-gigf~-----------~~~~~~~~~l~~i~~~~~~~----~~p~l~~~ 203 (210)
T PF00809_consen 165 RIILD-P-GIGFG-----------KDPEQNLELLRNIEELKELF----GYPILVGG 203 (210)
T ss_dssp GEEEE-T-TTTSS-----------TTHHHHHHHHHTHHHHHTTS----SSEBEEEE
T ss_pred HEeec-c-ccCcC-----------CCHHHHHHHHHHHHHHHHhC----CCCEEEEE
Confidence 39999 7 89994 23445566666676665443 34666654
No 232
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=25.22 E-value=61 Score=22.67 Aligned_cols=21 Identities=24% Similarity=0.453 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHH-HCCCCC
Q 011965 156 VTANDSYAFLIGWFK-RFPNFK 176 (474)
Q Consensus 156 ~~a~d~~~fL~~f~~-~fp~~~ 176 (474)
..-..++.++++|+. +|||+.
T Consensus 14 ~ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 14 KEINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHHccchhHH
Confidence 445678899999996 799974
No 233
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=25.09 E-value=2e+02 Score=27.99 Aligned_cols=68 Identities=16% Similarity=0.068 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHHCCC--C-CCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceee--eeeeEeeccccCccc
Q 011965 155 QVTANDSYAFLIGWFKRFPN--F-KSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFIN--LKGFMIGNAVINDPT 228 (474)
Q Consensus 155 ~~~a~d~~~fL~~f~~~fp~--~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~in--LkGi~igng~~dp~~ 228 (474)
...|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|.++...- .+.++ |.|.+.|.+..|...
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~Y-----ApeL~~~l~Gaa~gg~~~dl~~ 117 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPSY-----APELNRDLVGAAAGGPPADLAA 117 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHHh-----CcccccceeEEeccCCccCHHH
Confidence 34455555555554443332 2 35689999999998654 3444443331 25688 999999999877643
No 234
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=24.60 E-value=1.6e+02 Score=33.07 Aligned_cols=28 Identities=14% Similarity=0.024 Sum_probs=25.7
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcC
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMG 409 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~ 409 (474)
+.+||+.+|..|..++..++..+.+.|+
T Consensus 455 kvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 455 KASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 7999999999999999999988888885
No 235
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=24.23 E-value=1.3e+02 Score=31.68 Aligned_cols=53 Identities=23% Similarity=0.342 Sum_probs=42.9
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcccc
Q 011965 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTD 229 (474)
Q Consensus 162 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~q 229 (474)
-..++.||.+-|++ -|..|-|=||+=.-..|++--+. +.||+.|.|.++...+
T Consensus 103 K~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d-----------fDGIlAgaPA~~~~~~ 155 (474)
T PF07519_consen 103 KALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED-----------FDGILAGAPAINWTHL 155 (474)
T ss_pred HHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh-----------cCeEEeCCchHHHHHH
Confidence 35677888887765 59999999999988888665444 9999999999987653
No 236
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=24.21 E-value=82 Score=31.07 Aligned_cols=68 Identities=24% Similarity=0.412 Sum_probs=41.5
Q ss_pred CcceEEEeCCCCcC-cCccc----------CCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHH
Q 011965 126 AANMLFLEAPVGVG-FSYTN----------NSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQ 194 (474)
Q Consensus 126 ~anllfiDqPvGtG-fS~~~----------~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~ 194 (474)
..-|+|-||-|||| |--.- -...+.. +-++-...-|.||...|+ | +-.+|++|-|=|..-+-.
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~-gL~~nI~~AYrFL~~~ye--p---GD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQ-GLVQNIREAYRFLIFNYE--P---GDEIYAFGFSRGAFSARV 138 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHH-HHHHHHHHHHHHHHHhcC--C---CCeEEEeeccchhHHHHH
Confidence 45689999989887 22111 1112222 444555566777776664 2 346999999998766666
Q ss_pred HHHHH
Q 011965 195 LAELI 199 (474)
Q Consensus 195 lA~~i 199 (474)
+|.-|
T Consensus 139 lagmi 143 (423)
T COG3673 139 LAGMI 143 (423)
T ss_pred HHHHH
Confidence 65433
No 237
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=23.81 E-value=1.3e+02 Score=27.56 Aligned_cols=56 Identities=21% Similarity=0.216 Sum_probs=39.0
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHHHHHHHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 461 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~a~~~i~ 461 (474)
-..++|.+|+.|-++... ..++|.... .++.+++.+|.|+-...-. ...+.+.
T Consensus 149 P~~~lvi~g~~Ddvv~l~------~~l~~~~~~--------------------~~~~i~i~~a~HFF~gKl~-~l~~~i~ 201 (210)
T COG2945 149 PSPGLVIQGDADDVVDLV------AVLKWQESI--------------------KITVITIPGADHFFHGKLI-ELRDTIA 201 (210)
T ss_pred CCCceeEecChhhhhcHH------HHHHhhcCC--------------------CCceEEecCCCceecccHH-HHHHHHH
Confidence 588999999999555554 444444331 6888999999999876655 4445555
Q ss_pred HHH
Q 011965 462 KFL 464 (474)
Q Consensus 462 ~fl 464 (474)
.|+
T Consensus 202 ~~l 204 (210)
T COG2945 202 DFL 204 (210)
T ss_pred HHh
Confidence 565
No 238
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=23.63 E-value=33 Score=31.46 Aligned_cols=58 Identities=22% Similarity=0.155 Sum_probs=0.0
Q ss_pred eEEEeCCCCcCcCcccC---CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHH
Q 011965 129 MLFLEAPVGVGFSYTNN---SEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAEL 198 (474)
Q Consensus 129 llfiDqPvGtGfS~~~~---~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 198 (474)
+|=+| |.|-|-|+... +-++-. -|.+.|-|+.+.|.. .||-|.|-|=||.-.-..|.+
T Consensus 74 ivawD-PpGYG~SrPP~Rkf~~~ff~-~Da~~avdLM~aLk~----------~~fsvlGWSdGgiTalivAak 134 (277)
T KOG2984|consen 74 IVAWD-PPGYGTSRPPERKFEVQFFM-KDAEYAVDLMEALKL----------EPFSVLGWSDGGITALIVAAK 134 (277)
T ss_pred EEEEC-CCCCCCCCCCcccchHHHHH-HhHHHHHHHHHHhCC----------CCeeEeeecCCCeEEEEeecc
No 239
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=23.56 E-value=90 Score=29.87 Aligned_cols=51 Identities=18% Similarity=0.042 Sum_probs=36.7
Q ss_pred CCeEEEEecCCCCCCCh-hHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCCh
Q 011965 382 GLRIWVYSGDTDGRVPV-TSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAP 453 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~-~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP 453 (474)
..+++|.+|..|..++. ...+...+.|+=.+ ...++.++.|+||--..-.+
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g---------------------~~v~~~~~~g~~H~f~~~~~ 262 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAG---------------------QALTLRRQAGYDHSYYFIAS 262 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcC---------------------CCeEEEEeCCCCccchhHHH
Confidence 57899999999999998 45555555553111 16788889999998765544
No 240
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=22.88 E-value=89 Score=22.17 Aligned_cols=14 Identities=36% Similarity=0.657 Sum_probs=10.4
Q ss_pred eEEEeCCCCcCcCcc
Q 011965 129 MLFLEAPVGVGFSYT 143 (474)
Q Consensus 129 llfiDqPvGtGfS~~ 143 (474)
-+-++-| |+|+||.
T Consensus 41 ~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 41 RTTVGIP-GTGLSYR 54 (55)
T ss_pred EEEEEcC-CCccEEe
Confidence 3667766 9999984
No 241
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=22.72 E-value=45 Score=29.26 Aligned_cols=14 Identities=43% Similarity=0.909 Sum_probs=11.2
Q ss_pred CCceEeecCCCChh
Q 011965 81 KPLVLWLNGGPGCS 94 (474)
Q Consensus 81 ~PlilWlnGGPG~S 94 (474)
+|.+|||.|=||+-
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 58999999999873
No 242
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=22.72 E-value=89 Score=28.01 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=27.4
Q ss_pred CCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccc
Q 011965 177 SHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (474)
Q Consensus 177 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~ 223 (474)
.+|.||.++|-|+--+...+.++.. .++|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~-----------~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR-----------QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh-----------ccceEEEecCC
Confidence 5689999999999666666555533 38999998875
No 243
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=22.67 E-value=1.3e+02 Score=28.04 Aligned_cols=49 Identities=20% Similarity=0.276 Sum_probs=41.9
Q ss_pred CCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccccCChHH
Q 011965 382 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQ 455 (474)
Q Consensus 382 ~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP~dqP~~ 455 (474)
.-|||-.+|..|-++|...+..+++.+. |=.+-+|.||-|--..+|-+.
T Consensus 199 ~C~VLTvhGs~D~IVPve~AkefAk~i~-------------------------nH~L~iIEgADHnyt~~q~~l 247 (269)
T KOG4667|consen 199 QCRVLTVHGSEDEIVPVEDAKEFAKIIP-------------------------NHKLEIIEGADHNYTGHQSQL 247 (269)
T ss_pred cCceEEEeccCCceeechhHHHHHHhcc-------------------------CCceEEecCCCcCccchhhhH
Confidence 6889999999999999999999999885 556678999999887776554
No 244
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=21.97 E-value=65 Score=29.38 Aligned_cols=27 Identities=22% Similarity=0.042 Sum_probs=23.8
Q ss_pred CeEEEEecCCCCCCChhHHHHHHHHcC
Q 011965 383 LRIWVYSGDTDGRVPVTSTRYSINKMG 409 (474)
Q Consensus 383 irVLiy~Gd~D~~~~~~Gt~~~i~~l~ 409 (474)
-+++|.+|..|.+||....+...+.|+
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 457899999999999999999888875
No 245
>PRK10949 protease 4; Provisional
Probab=21.94 E-value=72 Score=34.74 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=46.7
Q ss_pred cceEEEeCCCCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccc--cccHHHHHHHHHHHhh
Q 011965 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYA--GHYVPQLAELIHERNI 204 (474)
Q Consensus 127 anllfiDqPvGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYg--G~yvP~lA~~i~~~n~ 204 (474)
+=+|-||.|-|.|+. ..+++.+.|..|=+ .++|++..|++|+ |+|+...|.+|.-...
T Consensus 115 givL~i~s~gG~~~a---------------~~~eI~~ai~~fk~-----sGKpVvA~~~~~~s~~YyLASaAD~I~l~P~ 174 (618)
T PRK10949 115 GIVLDLKNFAGADQP---------------SMQYIGKALREFRD-----SGKPVYAVGDSYSQGQYYLASFANKIYLSPQ 174 (618)
T ss_pred EEEEEeCCCCCccHH---------------HHHHHHHHHHHHHH-----hCCeEEEEecCccchhhhhhhhCCEEEECCC
Confidence 456777777554432 23456677777654 3569999999997 8888888887766532
Q ss_pred hcCCCceeeeeeeEeec
Q 011965 205 RAGKDSFINLKGFMIGN 221 (474)
Q Consensus 205 ~~~~~~~inLkGi~ign 221 (474)
-.+.+.|+...+
T Consensus 175 -----G~v~~~G~~~~~ 186 (618)
T PRK10949 175 -----GVVDLHGFATNG 186 (618)
T ss_pred -----ceEEEeeeecch
Confidence 246666766654
No 246
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=21.76 E-value=1e+02 Score=28.17 Aligned_cols=86 Identities=21% Similarity=0.378 Sum_probs=52.9
Q ss_pred ccccCcccccCcceEEEeCC---CCcCcCcccCCCCCccCChHHHHHHHHHHHHHHHHH--CCCCCCCCeEEeccccccc
Q 011965 116 LKFNKYSWNKAANMLFLEAP---VGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKR--FPNFKSHDFYIAGESYAGH 190 (474)
Q Consensus 116 l~~N~~SW~~~anllfiDqP---vGtGfS~~~~~~~~~~~~~~~~a~d~~~fL~~f~~~--fp~~~~~~~yi~GESYgG~ 190 (474)
+.++--+|.+. +|=-+ | +|||-- -.-+.|+++++.|+.|++. -+.-...--.|.|-|--|
T Consensus 149 iad~v~~w~ni--viAYE-PVWAIGTGk~-----------atp~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g- 213 (247)
T KOG1643|consen 149 IADKVKDWSNI--VIAYE-PVWAIGTGKT-----------ATPEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNG- 213 (247)
T ss_pred HHHhcCCccce--EEEee-ceeeecCCCC-----------CCHHHHHHHHHHHHHHHhhcchhhhhhceEEEecccccc-
Confidence 45566667653 22223 5 488843 2346799999999999985 333333334565555444
Q ss_pred cHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccc
Q 011965 191 YVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 191 yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~ 228 (474)
.=++.|.+. -.+.|+.+|..-+-|+.
T Consensus 214 ---~N~~el~~~---------~diDGFLVGGaSLKpeF 239 (247)
T KOG1643|consen 214 ---GNCKELAKK---------PDIDGFLVGGASLKPEF 239 (247)
T ss_pred ---ccHHHhccc---------ccccceEEcCcccChHH
Confidence 334444444 34899999998887753
No 247
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=20.97 E-value=1.9e+02 Score=31.25 Aligned_cols=50 Identities=22% Similarity=0.272 Sum_probs=40.6
Q ss_pred HHHHhcCCeEEEEecCCCCCCChhHHHHHHHHcCCCCccceeeeeecCeEeeEEEEeccCeEEEEEcCCeeccc
Q 011965 376 QKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVP 449 (474)
Q Consensus 376 ~~lL~~~irVLiy~Gd~D~~~~~~Gt~~~i~~l~w~~~~~~~~w~~~~~~~G~~k~~~~nLtf~~V~~AGHmvP 449 (474)
+.||+-+.+||+..|..|..|.-..-|..-++|. . --..++|.+|+|-+-
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq-----------------------A-~~elhVI~~adhsma 347 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ-----------------------A-EVELHVIGGADHSMA 347 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh-----------------------c-cceEEEecCCCcccc
Confidence 3467779999999999999999998888888885 1 334688999999753
No 248
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=20.91 E-value=1.6e+02 Score=30.28 Aligned_cols=56 Identities=13% Similarity=0.154 Sum_probs=40.3
Q ss_pred HHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCccc
Q 011965 163 AFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPT 228 (474)
Q Consensus 163 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~~ 228 (474)
++|.+|+..- +.+++|.|-+-||..+-..++.+.+.+. +-..+++++..+-+|+..
T Consensus 157 ~~l~~~i~~~----G~~v~l~GvCqgG~~~laa~Al~a~~~~------p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 157 DYLIEFIRFL----GPDIHVIAVCQPAVPVLAAVALMAENEP------PAQPRSMTLMGGPIDARA 212 (406)
T ss_pred HHHHHHHHHh----CCCCcEEEEchhhHHHHHHHHHHHhcCC------CCCcceEEEEecCccCCC
Confidence 4666666433 4469999999999988887777766532 123888888888888764
No 249
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=20.74 E-value=2.2e+02 Score=26.46 Aligned_cols=106 Identities=21% Similarity=0.254 Sum_probs=54.9
Q ss_pred CceEeecCCCChhhhhhhhhhhcCCeEEc-------------CCCC--cccccCcccc-cCcceEEEeCCCCcCcCcccC
Q 011965 82 PLVLWLNGGPGCSSIAYGAAQELGPFLVG-------------GNGS--RLKFNKYSWN-KAANMLFLEAPVGVGFSYTNN 145 (474)
Q Consensus 82 PlilWlnGGPG~SS~~~g~~~e~GP~~i~-------------~~~~--~l~~N~~SW~-~~anllfiDqPvGtGfS~~~~ 145 (474)
=|++=..|-||...++ |--.|++|..-. .+++ .++--.|..+ -..=.+||+ .| |
T Consensus 30 ~LTvH~tGN~~~a~~G-G~p~~la~a~P~~~~~~l~~l~~~~~e~y~v~~EaTHHGPt~~~~Ps~FvE----IG-S---- 99 (213)
T PF04414_consen 30 SLTVHTTGNFGEAEYG-GKPGELAPANPRLMKALLRALKKHAPEGYEVSYEATHHGPTDLSVPSVFVE----IG-S---- 99 (213)
T ss_dssp EEEEE--EESS--TTS-S-TTEE-BB-HHHHHHHHHHHHHHGGCT-EEEE--S-SS-----SBEEEEE----EE-E----
T ss_pred eEEEeCCCCCCccccC-CCCCccccCCHHHHHHHHHHHHHhccCCCEEEEEeeccCCCCCCCCcEEEE----eC-C----
Confidence 3677788888886665 666666654311 1111 1222223333 334567777 33 1
Q ss_pred CCCCccCChHHHHHHHHHHHHHHHHHCCCCC-CCCeEEeccccccccHHHHHHHHHHH
Q 011965 146 SEDLHKLGDQVTANDSYAFLIGWFKRFPNFK-SHDFYIAGESYAGHYVPQLAELIHER 202 (474)
Q Consensus 146 ~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~-~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (474)
+... |++..+++-+.+.|.+.+..-++-. .+++.-+| ||||+|.+.+.+++.
T Consensus 100 te~e--W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 100 TEEE--WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp SHHH--HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred CHHH--hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 1122 3788899999999999998765432 13555555 899999999888775
No 250
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=20.71 E-value=1.5e+02 Score=31.81 Aligned_cols=60 Identities=8% Similarity=0.040 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccccccHHHHHHHHHHHhhhcCCCceeeeeeeEeeccccCcc
Q 011965 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (474)
Q Consensus 159 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~~inLkGi~igng~~dp~ 227 (474)
+.+.++|..--+.-. .+++.+.|.|-||.....++........ .-.++++++....+|..
T Consensus 272 ~~i~~Ald~V~~~tG---~~~vnl~GyC~GGtl~a~~~a~~aA~~~------~~~V~sltllatplDf~ 331 (560)
T TIGR01839 272 DALKEAVDAVRAITG---SRDLNLLGACAGGLTCAALVGHLQALGQ------LRKVNSLTYLVSLLDST 331 (560)
T ss_pred HHHHHHHHHHHHhcC---CCCeeEEEECcchHHHHHHHHHHHhcCC------CCceeeEEeeecccccC
Confidence 455555555444332 4689999999999999865444433321 12488888888777754
No 251
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=20.42 E-value=1e+02 Score=33.23 Aligned_cols=48 Identities=13% Similarity=0.214 Sum_probs=29.6
Q ss_pred CCCeEEeccccccccHHHHHHHHHHHhhhc---C-------CCceeeeeeeEeecccc
Q 011965 177 SHDFYIAGESYAGHYVPQLAELIHERNIRA---G-------KDSFINLKGFMIGNAVI 224 (474)
Q Consensus 177 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~---~-------~~~~inLkGi~igng~~ 224 (474)
++++.|+|+|+||.++-.+-+.+-.....+ . -+..|++.|-.+|.+-.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~Ka 269 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVPKA 269 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcHHH
Confidence 568999999999988877765431000000 0 01357888877776543
No 252
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.41 E-value=1.4e+02 Score=33.10 Aligned_cols=96 Identities=19% Similarity=0.238 Sum_probs=52.8
Q ss_pred CCCCceEeecCCCCh-------hhhhhhhhhhcCCeEEcCCCCcccccCcccccCcceEEEeCCCCcCcCcccCCCCCcc
Q 011965 79 SSKPLVLWLNGGPGC-------SSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHK 151 (474)
Q Consensus 79 ~~~PlilWlnGGPG~-------SS~~~g~~~e~GP~~i~~~~~~l~~N~~SW~~~anllfiDqPvGtGfS~~~~~~~~~~ 151 (474)
..-|| +++-|--|+ .|.+ .+-...||++=.. -.+||++. +-.=+|= .=-||-- ...
T Consensus 88 sGIPV-LFIPGNAGSyKQvRSiAS~a-~n~y~~~~~e~t~----~~d~~~~~----DFFaVDF--nEe~tAm-----~G~ 150 (973)
T KOG3724|consen 88 SGIPV-LFIPGNAGSYKQVRSIASVA-QNAYQGGPFEKTE----DRDNPFSF----DFFAVDF--NEEFTAM-----HGH 150 (973)
T ss_pred CCceE-EEecCCCCchHHHHHHHHHH-hhhhcCCchhhhh----cccCcccc----ceEEEcc--cchhhhh-----ccH
Confidence 33455 456666664 3442 5666789988322 23677776 3333440 0011110 111
Q ss_pred CChHHHHHHHHHHHHHHHH---HCCCCC---CCCeEEeccccccccH
Q 011965 152 LGDQVTANDSYAFLIGWFK---RFPNFK---SHDFYIAGESYAGHYV 192 (474)
Q Consensus 152 ~~~~~~a~d~~~fL~~f~~---~fp~~~---~~~~yi~GESYgG~yv 192 (474)
.-.+.++.+.++|+--++ .-+|++ ...+.|.|+||||.-+
T Consensus 151 -~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 151 -ILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred -hHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 345566777666665554 334565 4459999999999643
Done!