BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011969
(474 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BT22|ALG1_HUMAN Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Homo
sapiens GN=ALG1 PE=1 SV=2
Length = 464
Score = 338 bits (868), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/473 (42%), Positives = 273/473 (57%), Gaps = 42/473 (8%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGRA VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K ++Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVLQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ L S ++DWHN+GY+++ L G V + +W EK++G++++ LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMR 200
Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 238
+LA NW I+A +YD+P FF T L+ +H LF +L +H P + + E
Sbjct: 201 EDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR-----SEPEDPV 254
Query: 239 ADETIFT---SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 295
+ + FT + +G+ L+ RPAL+VSSTSWT DEDF ILL A
Sbjct: 255 TERSAFTERDAGSGLVTRLR-ERPALLVSSTSWTEDEDFSILLAAL-------------- 299
Query: 296 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 355
E F + DG P L+ +ITGKGP +E Y I + + + T WL AED
Sbjct: 300 -----EKFEQLTLDGHNL--PSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPWLEAED 352
Query: 356 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 415
YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NGL+F
Sbjct: 353 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENGLVFED 412
Query: 416 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 468
S ELA QL MLF FPD + L + R L RW W + PL+ +
Sbjct: 413 SEELAAQLQMLFSNFPDPAGKLNQFRK-NLRESQQLRWDESWVQTVLPLVMDT 464
>sp|Q921Q3|ALG1_MOUSE Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus
musculus GN=Alg1 PE=2 SV=3
Length = 482
Score = 338 bits (867), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 197/466 (42%), Positives = 270/466 (57%), Gaps = 32/466 (6%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L++ I I +
Sbjct: 30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T + G P++L+ +K + Q LLW + + +FL QNPP +P + +
Sbjct: 89 TDLRGLGAG-PRILQ---YGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPAIAVCWF 143
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +L
Sbjct: 144 VGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMREDL 203
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 241
A+NW ++A LYD+P FF T L+ +HELF +L+ H Q C + + +++
Sbjct: 204 AENWCVRAVTLYDKPASFFKETPLDLQHELFMKLS---HTYSPFQSCSDPSHPDTERSAF 260
Query: 242 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 301
T +G+ L RPAL+VSSTSWT DEDF ILL A ++++ L D
Sbjct: 261 TERDCQSGVVRRLH-GRPALLVSSTSWTEDEDFSILLRALEKFEQQA---LTGDS----- 311
Query: 302 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 361
P L+ +ITGKGP +E Y I + L+ V F T WL AEDYPLLLG
Sbjct: 312 -------------LPSLVCVITGKGPLREHYRHLISQKHLQHVRFCTPWLEAEDYPLLLG 358
Query: 362 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 421
SADLGVCLH SSSGLDLPMKVVDMFGC LPVCAV++ C+ ELV+ +NGL+F + ELA
Sbjct: 359 SADLGVCLHMSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVRHGENGLVFKDAEELAA 418
Query: 422 QLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 467
QL MLF FPD + L + R E G RW W+ PL+
Sbjct: 419 QLQMLFSKFPDPAGKLSQFRKKLQESG-QQRWDESWQHTVLPLLAH 463
>sp|Q5R7A2|ALG1_PONAB Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Pongo
abelii GN=ALG1 PE=2 SV=1
Length = 464
Score = 335 bits (860), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 198/470 (42%), Positives = 267/470 (56%), Gaps = 36/470 (7%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGR VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRTARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K + Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVFQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ L S ++DWHN+GY+++ L G V + +W E+++G++++ LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYERFFGRLSHLNLCVTNAMR 200
Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 238
+LA+NW I+A +YD+P FF T L+ +H LF +L H P + + E
Sbjct: 201 EDLAENWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGGT-HSPFRARSEPEDPATERSA 259
Query: 239 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 298
E + +G+ L RPAL+VSSTSWT DEDF ILL A
Sbjct: 260 FTER--DAGSGLVTRLH-ERPALLVSSTSWTEDEDFSILLAAL----------------- 299
Query: 299 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 358
E F + DG P L+ +ITGKGP +E Y I + + + T WL AEDYPL
Sbjct: 300 --EKFEQLTLDGHSL--PSLVCVITGKGPLREYYSHLIHQKHFQHIQVCTPWLEAEDYPL 355
Query: 359 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 418
LLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NGL+F S E
Sbjct: 356 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVKHEENGLVFEDSEE 415
Query: 419 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 468
LA QL MLF FPD + L + R L RW W + PL+ +
Sbjct: 416 LAAQLQMLFSNFPDPAGKLNQFRK-NLRESQQLRWDESWVQTVLPLVMDT 464
>sp|P90522|ALG1_DICDI Chitobiosyldiphosphodolichol beta-mannosyltransferase
OS=Dictyostelium discoideum GN=alg1 PE=2 SV=1
Length = 493
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 251/436 (57%), Gaps = 35/436 (8%)
Query: 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
R VVVLGD+GRSPRMQY ++SL++ + +V ++ Y S+PH I+ + SI I + +
Sbjct: 2 NRVAVVVLGDIGRSPRMQYHSMSLSKLENTKVTLIGYRESEPHPQIVNNDSITIEPLKPF 61
Query: 65 P-TIPRGLPKV------LKPVLLLLKPLIQFFMLLWFLCVKIASP-DVFLVQNPPSVPTL 116
P ++ K+ + P+L + K L Q L++ L VK+ SP + LVQ+PP++PT+
Sbjct: 62 PISMSNSFKKIPLISIFMWPLLAICKVLFQIIQLMYVLLVKVPSPLNTILVQSPPAIPTI 121
Query: 117 VAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH--FVSIYRWIEKYYGKMANGCLCVT 174
++ +R ++DWHN GYTLL LSL + + + + ++IE+Y+ K A L VT
Sbjct: 122 FVMQIVCWIRGVHLVIDWHNLGYTLLKLSLSKSDNHPIIRLAKFIERYFAKNAYAHLFVT 181
Query: 175 QAMQHELAQNWGIKAT--VLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 232
M+ +L ++W +K V +D+ F + E+ E ++ ++
Sbjct: 182 NEMKIQLVRDWNLKGKTFVFHDKASPIFKSLTDREQEEF-------------LKTFINKY 228
Query: 233 GMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAI 291
++G+ D+ S+ P + ++++SSTSWT DEDF ILL+A + YD +
Sbjct: 229 SIKGE--DKVYIESVISKKSIRNPKQQTSIIISSTSWTQDEDFSILLDAIVKYD--IEHA 284
Query: 292 LNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL 351
+N +++ EE D L LLFIITGKGP KE Y+EKI L LK+ T+WL
Sbjct: 285 INNNNNKVEEA-----QDESVVLAENLLFIITGKGPQKEYYQEKINSLSLKKSRIITVWL 339
Query: 352 SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 411
+EDYP LL DLGV LH SSSG+DLPMKVVDMFGC LPV A+ + CI ELVKV+ NG
Sbjct: 340 DSEDYPKLLACCDLGVSLHNSSSGIDLPMKVVDMFGCCLPVLAIDFKCIGELVKVNYNGF 399
Query: 412 LFSSSSELADQLLMLF 427
LF S +L L LF
Sbjct: 400 LFKDSDQLHQLLNQLF 415
>sp|O13933|ALG1_SCHPO Chitobiosyldiphosphodolichol beta-mannosyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=alg1 PE=3 SV=2
Length = 424
Score = 268 bits (686), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 246/468 (52%), Gaps = 77/468 (16%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILE-HPSIHIHTMT 62
+ R V+VLGD+ RSPRMQY A+S A+ + +VD++ Y + E H +I + +
Sbjct: 24 KKRIIVLVLGDIARSPRMQYHAVSFAK-LGWKVDLLGYQHPGSSVGLFESHENIRFYPI- 81
Query: 63 QWPTIPRGL-PKVLKPVLLL--LKPLIQFFMLLWFLCVKIASPDVFL-VQNPPSVPTLVA 118
P++P L PK L L LK L QF L W L V+ P FL +QNPP +P
Sbjct: 82 --PSLPAYLQPKNRLQFLFLGPLKVLHQFLALNWALFVR--KPASFLFIQNPPCIPVFFI 137
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ LR + FI+DWHNFGY++L+L LG++ FV + + EKY + A L V++ M+
Sbjct: 138 AQCLHILRGTKFIIDWHNFGYSILALKLGKQHTFVKLLKIYEKYMARGAYAHLTVSKRMK 197
Query: 179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 237
++ Q WG+ V YD+PP F P E+K ++
Sbjct: 198 -DVLQTWGMNPCYVCYDRPPNHFTPIKNEQKKQM-------------------------- 230
Query: 238 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 297
S+ I P+ L+++STSWTPDED IL EA LNE D
Sbjct: 231 --------SIKKIPCEYNPSSTKLLITSTSWTPDEDIYILWEA-----------LNEYDK 271
Query: 298 TNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYP 357
T + P+LL +ITGKGP KE + + I++ L +V F WLS EDYP
Sbjct: 272 TLDT--------------PKLLVLITGKGPMKEEFSQYIKKHPLHKVRFCMPWLSIEDYP 317
Query: 358 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 417
++ ADLGVCLHTSSSGLDLPMKVVD+FGCG+PV A+SY I ELV +NGL+ + S
Sbjct: 318 QVMACADLGVCLHTSSSGLDLPMKVVDLFGCGVPVIALSYPTISELVHDGENGLIVNDSK 377
Query: 418 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 465
L+ ++ L ++ L L+ G L+ RW EW + P++
Sbjct: 378 ALSKKMQYLL----THANELNSLKLGALKES-EYRWDDEWNKVIPPIV 420
>sp|Q6C3K2|ALG1_YARLI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=ALG1 PE=3 SV=1
Length = 463
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 242/478 (50%), Gaps = 78/478 (16%)
Query: 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
+R R V+VLGDLGRSPRM Y A SLAR +VD+ Y G+KP IL + I IH +
Sbjct: 38 KRKRTIVLVLGDLGRSPRMLYHARSLARS-GHKVDLCGYDGAKPFDEILNNDLIKIHHI- 95
Query: 63 QWPTI--PRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
P I R LP V V +LK + Q ++L+ L K+ D LVQNPPS+PTL V+
Sbjct: 96 --PLILNTRKLPFV---VFGILKVIRQHWLLISLLY-KLRGADYLLVQNPPSIPTLGVVR 149
Query: 121 WASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ + R+ ++DWHNFGYT+L+L L V ++ E ++G A LCVT M
Sbjct: 150 FYNLFLSTRTKVVLDWHNFGYTILALKLPETHPMVKFAKFYEGFFGGRAFVHLCVTVLMG 209
Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 235
+ + +G+ + L+D+P F P S EK ++ + L+ +
Sbjct: 210 QAMRKTFGMSGRRIVPLHDRPAFHFKPLSESEKLDVLRDFKETLY--------------D 255
Query: 236 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 295
AD I +VSSTS+TPDE+F ILL+A +YD +
Sbjct: 256 DMTADHKI------------------IVSSTSYTPDENFNILLDALALYDESKLDL---- 293
Query: 296 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 355
P L IITGKGP + K+ +L+LKRV+ RT WL D
Sbjct: 294 --------------------PPLRVIITGKGPMMPEFLAKVEKLQLKRVSIRTAWLEFAD 333
Query: 356 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 415
YP +LG+A LGV LH SSSG DLPMKVVDMFGCG+PV +V Y+ + ELVK + NG+
Sbjct: 334 YPRILGAAHLGVSLHESSSGYDLPMKVVDMFGCGIPVVSVDYAALSELVKTNTNGVAVKG 393
Query: 416 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL--ITEVISQ 471
E+ + + LF + L ++ G + + W W + PL I E + Q
Sbjct: 394 HVEMGNTFMSLF----SNRGKLDNIKRGAMIESRNT-WDQTWVKTVGPLFDIGEYVQQ 446
>sp|Q59Q79|ALG1_CANAL Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=ALG1 PE=3
SV=1
Length = 456
Score = 228 bits (580), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 234/463 (50%), Gaps = 74/463 (15%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
+R + VLGDLG SPRM Y A S ++ + V++ Y ++P I++ +I I +
Sbjct: 49 NKRKTISIFVLGDLGHSPRMCYHASSFSK-LDYYVNLCGYVETEPSHQIVDDVNIDIIPI 107
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
LP ++ +L +++ + + +LW D ++QNPPS+P L+ V
Sbjct: 108 EAIKNT-NNLPYIMFAILKVVRQCGKIWSILW----DTRGSDYIMIQNPPSIPILLIVIL 162
Query: 122 ASSL--RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178
++ R + I+DWHN YT+L+L +H FV + + EK G+ AN + VT++M+
Sbjct: 163 FKTVFSRETKLIIDWHNLNYTILNLRYNNLNHPFVKLVKLYEKILGQFANLNITVTKSMK 222
Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 235
L + +G K LYD+P F P L K E M
Sbjct: 223 KYLVKEFGFQKSKIVTLYDRPGVQFQP--LSNKREF----------------------MS 258
Query: 236 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 295
K E ID+ + +++SSTS+TPDEDF ILL+A + N +
Sbjct: 259 EHKLFE-------DIDI----EKYKVLISSTSFTPDEDFNILLDA----------LKNYE 297
Query: 296 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAE 354
++ N P +L I+TGKGP K + E + +L +V ++ WLS+E
Sbjct: 298 NTPNT---------------PPILLIVTGKGPLKGKFLETVDKLEFTNKVCVKSAWLSSE 342
Query: 355 DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 414
DYP +L ADLG+ LHTSSSG+DLPMK+VD FGCG+PV ++ + I+ELVK NGL+ +
Sbjct: 343 DYPKVLACADLGISLHTSSSGIDLPMKIVDFFGCGVPVVSLDFPAIDELVKNKVNGLITN 402
Query: 415 SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457
S S+ ++ L D +L+ ++ G LE ++RW W
Sbjct: 403 SKSDQTKEVARLVTEVFTDDALLRSIKEGALEES-NSRWDENW 444
>sp|P16661|ALG1_YEAST Chitobiosyldiphosphodolichol beta-mannosyltransferase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ALG1 PE=1 SV=1
Length = 449
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 236/467 (50%), Gaps = 65/467 (13%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R + VLGD+G SPR+ Y A+S ++ + +V++ Y I P+I +H M+
Sbjct: 38 KKRIIIFVLGDVGHSPRICYHAISFSK-LGWQVELCGYVEDTLPKIISSDPNITVHHMSN 96
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTL-VAVKWA 122
G V+ V +L ++ F LLW ++ D LVQNPPS+P L +AV +
Sbjct: 97 LKR-KGGGTSVIFMVKKVLFQVLSIFKLLW----ELRGSDYILVQNPPSIPILPIAVLY- 150
Query: 123 SSLRRSAFIVDWHNFGYTLLSLSL-GRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
L I+DWHN Y++L L G H V I +E + K A+ L VT+AM+
Sbjct: 151 -KLTGCKLIIDWHNLAYSILQLKFKGNFYHPLVLISYMVEMIFSKFADYNLTVTEAMRKY 209
Query: 181 LAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 237
L Q++ + + VLYD+P F P + + + K L +++ + + + +
Sbjct: 210 LIQSFHLNPKRCAVLYDRPASQFQPLAGDISRQ------KALTTKAFIKNYIRD-DFDTE 262
Query: 238 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 297
K D+ ++V+STS+TPDED GILL A +Y+ DS
Sbjct: 263 KGDK-------------------IIVTSTSFTPDEDIGILLGALKIYENSYVKF----DS 299
Query: 298 TNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYP 357
+ P++L ITGKGP KE Y +++ KR +WLSAEDYP
Sbjct: 300 S----------------LPKILCFITGKGPLKEKYMKQVEEYDWKRCQIEFVWLSAEDYP 343
Query: 358 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 417
LL D GV LHTSSSGLDLPMK++DMFG GLPV A++Y ++ELV+ + NGL F
Sbjct: 344 KLLQLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVIAMNYPVLDELVQHNVNGLKFVDRR 403
Query: 418 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 464
EL + L+ K D+D+ +KL+ + RW + WE + L
Sbjct: 404 ELHESLIFAMK----DADLYQKLKKNVTQEA-ENRWQSNWERTMRDL 445
>sp|Q6CVU2|ALG1_KLULA Chitobiosyldiphosphodolichol beta-mannosyltransferase
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG1 PE=3
SV=1
Length = 447
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 225/461 (48%), Gaps = 72/461 (15%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R +VVLGDLG SPR+ Y A S ++ +V++ Y S IL+ +I IH + +
Sbjct: 42 KTRILIVVLGDLGHSPRILYHARSFSKA-GFQVELSGYVDSDIPTDILDDDNIEIHGLKK 100
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
+ + L K LK L Q + W K+ + D L+QNPP++P L
Sbjct: 101 YGSEKGLLVKALKQGL-------QLCSMFW----KLRAVDYILLQNPPTIPILPIAVVVK 149
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRR--SHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
+ R+ I+DWHN GYT+L + + V + IE + K AN L VT+AM+ L
Sbjct: 150 TFSRAKLIIDWHNLGYTILQMKFKDQFLHPLVLLAYLIEWIFAKFANYHLTVTKAMKTYL 209
Query: 182 AQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSN-AGMEGQ 237
+ +GI K VLYD+P + F P + E + Q+ ++ E
Sbjct: 210 VEKFGIDGKKIAVLYDRPGKQFSPLKEADDREALLK-----------QEFIAKYIPKEFD 258
Query: 238 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 297
+ + IF V+STS+TPDED +L+ + +Y+ D
Sbjct: 259 ISKDKIF------------------VTSTSFTPDEDISVLIGSFKIYENSFQKF----DQ 296
Query: 298 TNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYP 357
T PR+L ITGKGP +E ++++ + RV +WLS+EDYP
Sbjct: 297 T----------------LPRILCFITGKGPLQEKIVKQVQDFKWDRVQVEFLWLSSEDYP 340
Query: 358 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 417
LL D GV LHTSSSGLDLPMK++DMFG GLPV ++Y ++ELV+ + NGL F+
Sbjct: 341 KLLRLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVICMNYPVLDELVQQNVNGLKFADRR 400
Query: 418 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 458
EL + L+ K D V ++++ G L RW WE
Sbjct: 401 ELHEALIFSVK----DEQVHQEIKRGALRES-KNRWNESWE 436
>sp|Q75BA5|ALG1_ASHGO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=ALG1 PE=3 SV=2
Length = 471
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 223/456 (48%), Gaps = 65/456 (14%)
Query: 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWP 65
R + VLGDLG SPR+ Y A S + EV++ Y +P +L+ P + I +
Sbjct: 64 RIAIYVLGDLGHSPRICYHARSFS-AAGWEVELCGYLEEQPPKDLLDDPRVTIRALPGAS 122
Query: 66 TIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL 125
+ L + + V+L +++ LW ++ D L+QNPPS+P L V L
Sbjct: 123 NAGKSLGQTARKVVLQTCHIVR---QLW----ELRGCDYILIQNPPSIPLLPIVAIFKVL 175
Query: 126 RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQHELAQN 184
R+ I+DWHNF YT+L L +GR H V + +E + +MA+ + VT AM+ L Q+
Sbjct: 176 TRTRLILDWHNFAYTVLQLRVGRFLHPLVLVSYAVEFLFSRMADYHITVTAAMKDYLVQS 235
Query: 185 WGIKA---TVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 241
+ + A V+YD+P E F P E+ L +P ++ + AG + Q+ D
Sbjct: 236 FLLPARRIAVMYDRPGEQFRPLPAGER-------GAALAEPF-IRGYIP-AGFDVQRGD- 285
Query: 242 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 301
++V+STS+T DED +L A +Y+ A D+T
Sbjct: 286 ------------------TILVTSTSFTLDEDINVLFGALKIYESAAAKF----DTT--- 320
Query: 302 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 361
PR+L +TGKGP K Y E++R + +R +WLSAEDYP LL
Sbjct: 321 -------------LPRILLFVTGKGPLKGKYMEEVRNYKWERCTIHFLWLSAEDYPRLLQ 367
Query: 362 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 421
D GV LHTS+SGLDLPMKV+DMFG GLP + Y I ELV+ NGL F++ EL
Sbjct: 368 LCDFGVSLHTSTSGLDLPMKVLDMFGSGLPAFVMDYPAIGELVQDRVNGLRFTTRRELEQ 427
Query: 422 QLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457
L+ K D K L+ L + RW W
Sbjct: 428 CLIFAIK----DEHTRKVLKENAL-LESKNRWHQSW 458
>sp|Q6FLZ2|ALG1_CANGA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=ALG1 PE=3 SV=1
Length = 450
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 236/472 (50%), Gaps = 76/472 (16%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R + VLGD+G SPRM Y A S + + +V++ Y + I E P+I +H +
Sbjct: 40 KKRIIIYVLGDIGHSPRMCYHARSFSEK-GWQVELCGYVEEQVPGFIAEDPNIIVHAL-- 96
Query: 64 WPTI-----PRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTL-V 117
PT+ R + ++K VL + +I LW ++ + L+QNPPS+P L +
Sbjct: 97 -PTLTLQGNKRSIIFLVKKVLFQVSAIIA---QLW----ELRGSNYMLIQNPPSIPILPI 148
Query: 118 AVKWASSLRRSAFIVDWHNFGYTLLSLSL-GRRSHFVSIYRWIEKY-YGKMANGCLCVTQ 175
AV + L I+DWHN Y+++ L G H V + ++ +Y +GK A L VT+
Sbjct: 149 AVFY--RLSGCKLIIDWHNLAYSIMQLKFNGNFYHPVVLASYVIEYIFGKFATYNLTVTE 206
Query: 176 AMQHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 232
AM+ L ++G+ + VLYD+P F P + E K+L ++D +
Sbjct: 207 AMKEYLVNSFGLNPKRCVVLYDRPATQFKPLTESESR------TKLLDSEF-IRDMIPE- 258
Query: 233 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL 292
G +K D+ ++V+STS+TPDED IL+ A +YD
Sbjct: 259 GFNVEKGDK-------------------IIVTSTSFTPDEDISILIGALKIYDNSYE--- 296
Query: 293 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS 352
N D S P++L +TGKGP KE Y + + + V + +WL
Sbjct: 297 NLDKSL-----------------PKILCFVTGKGPMKERYVKDVEEHDWQHVYVKFVWLK 339
Query: 353 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 412
+EDYP LL D GV LH SSSGLDLPMK++DM+G G+PV A +Y + ELVK ++NGL
Sbjct: 340 SEDYPRLLQLCDYGVSLHKSSSGLDLPMKILDMYGSGIPVIAYNYPVLGELVKYNENGLK 399
Query: 413 FSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 464
F EL + L+ K D ++ KKL+ G L+ RW + W+ + L
Sbjct: 400 FLDRRELHESLIFAMK----DPELYKKLKQGALKES-QIRWNSSWQSAMQEL 446
>sp|Q6BS98|ALG1_DEBHA Chitobiosyldiphosphodolichol beta-mannosyltransferase
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=ALG1 PE=3 SV=2
Length = 472
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 233/472 (49%), Gaps = 76/472 (16%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
G+R + VLGDLG SPRM Y A S ++ + V++ Y +P I++ +I I+ +
Sbjct: 52 GKRKTVSIFVLGDLGHSPRMCYHAKSFSK-LDYYVNLCGYLEEQPPFDIIDDINIDIYPI 110
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T LP +L K ++QFF LL L D L+QNPPS+P L+ V
Sbjct: 111 TVTKNT-SNLPFIL---FAAKKMVVQFFQLLKLLS-DFRGTDYVLIQNPPSIPILLIVLA 165
Query: 122 ASSL--RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ R++ I+DWHN YT+L+L H V I + E+ G+ A+ + VT+ M+
Sbjct: 166 YIKVFSRKTKLIIDWHNLNYTILNLKFQNLKHPLVRILKTYERVLGQFADYNITVTRQMK 225
Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 235
L + + K L+D+P E F P + + G+
Sbjct: 226 EFLIKEFNFNKKKIITLHDRPGEQFKP--------------------------LESLGVT 259
Query: 236 GQKADET--IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 293
Q+ E+ IF + I + ++VSSTS+TPDEDF +LL A YD +A
Sbjct: 260 KQEILESHDIFRDIQNISKY------KILVSSTSFTPDEDFNLLLSALNQYDNSLA---- 309
Query: 294 EDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLS 352
+ P +L IITGKGP K + +K+++L V + WLS
Sbjct: 310 ------------------ERGLPPILIIITGKGPLKSQFLQKVKQLNFSDNVIIKNAWLS 351
Query: 353 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 412
+EDYPL+L ADL + LHTSSSG+DLPMK+VD FGCG+PV + + I ELV NGL+
Sbjct: 352 SEDYPLILSVADLSISLHTSSSGIDLPMKIVDFFGCGIPVITLRFPAIGELVTHGTNGLI 411
Query: 413 F-----SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 459
SS +E + +L + F +D ++L K++ G L+ + RW W
Sbjct: 412 TKSDKDSSVNESQEIYRLLTEAFKND-ELLDKIKQGALKES-NLRWEENWNN 461
>sp|C9J202|AG1L2_HUMAN Putative glycosyltransferase ALG1L2 OS=Homo sapiens GN=ALG1L2 PE=3
SV=1
Length = 215
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 119/245 (48%), Gaps = 44/245 (17%)
Query: 189 ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT--- 245
A +YD+P FF L+ +H LF +L H P + + E + + FT
Sbjct: 8 AVTVYDKPASFFKEAPLDLQHRLFMKLGST-HSPFRAR-----SEPEDPDTERSAFTERD 61
Query: 246 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 305
S +G+ L RPAL+VSSTSWT E +
Sbjct: 62 SGSGLVTRLH-ERPALLVSSTSWTEFEQLTL----------------------------- 91
Query: 306 EISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADL 365
DG+ P L+ +ITGKGP +E Y I + + + WL P LLGS DL
Sbjct: 92 ---DGQNL--PSLVCVITGKGPLREYYSRLIHQKHFQHIQVCIPWLEGRGLPPLLGSVDL 146
Query: 366 GVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLM 425
VCL TSSSGLDLPMKVVDMF C LP CAV++ C+ ELVK ++N L+F S ELA QL
Sbjct: 147 DVCLDTSSSGLDLPMKVVDMFRCCLPACAVNFKCLHELVKHEENRLVFEDSEELAAQLQY 206
Query: 426 LFKGF 430
F
Sbjct: 207 FADAF 211
>sp|Q6GMV1|ALG1L_HUMAN Putative glycosyltransferase ALG1-like OS=Homo sapiens GN=ALG1L
PE=2 SV=2
Length = 187
Score = 115 bits (287), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 78/127 (61%), Gaps = 6/127 (4%)
Query: 346 FRTMWLSAEDYPLLL----GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 401
F + L + P L+ GS DLGVCLH SSSGLDLPMKVVDMFGC LPVCAV++ C+
Sbjct: 35 FEQLTLDGHNLPSLVCVITGSVDLGVCLHMSSSGLDLPMKVVDMFGCCLPVCAVNFKCLH 94
Query: 402 ELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 461
ELVK ++NGL+F S ELA L MLF FPD + L + L RW W +
Sbjct: 95 ELVKHEENGLVFEDSEELA-ALQMLFSNFPDPAGKLNQFWK-NLRESQQLRWDESWVQTV 152
Query: 462 KPLITEV 468
PL+ ++
Sbjct: 153 LPLVMDI 159
>sp|Q6G424|UVRC_BARHE UvrABC system protein C OS=Bartonella henselae (strain ATCC 49882 /
Houston 1) GN=uvrC PE=3 SV=1
Length = 661
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 247 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 306
+AG + F+K + ST TP +DFG++ E + RR + ++ E +E ++
Sbjct: 448 VAGKNGFIKNQYRKFNIRSTDITPGDDFGMMKE---VIKRRFSRLIKEHGLPHESKNIQS 504
Query: 307 ISDGKQYLYPRLLFIITGKG 326
D ++P L+ I GKG
Sbjct: 505 KDDASFPIWPDLILIDGGKG 524
>sp|P71243|WCAL_ECOLI Putative colanic acid biosynthesis glycosyltransferase WcaL
OS=Escherichia coli (strain K12) GN=wcaL PE=3 SV=2
Length = 406
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 320 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD-- 377
+ I G GP + I + +L+ V + + + +L AD V L S +G D
Sbjct: 256 YRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDAD--VFLLPSVTGADGD 313
Query: 378 ---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 412
+P+ +++ G+PV + +S I ELV+ DK+G L
Sbjct: 314 MEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWL 351
>sp|O34413|YTCC_BACSU Putative glycosyltransferase YtcC OS=Bacillus subtilis (strain 168)
GN=ytcC PE=3 SV=1
Length = 407
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 318 LLFIITGKGPDKESYEEKIRRLRLKRVAFR-----TMWLSAEDYPLLLGSADLGVCLHTS 372
+L I GK +S + + LR + +R T ++ A+D P L AD+ VC
Sbjct: 224 VLVIAGGKWFSDDSENQYVTYLRTLALPYRDHIIFTKFIPADDIPNLFLMADVFVC---- 279
Query: 373 SSGLDLPMKVVD--MFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGF 430
SS + P+ V+ G P+ + E+VK + GL+ S ++ + + + F
Sbjct: 280 SSQWNEPLARVNYEAMAAGTPLITTNRGGNGEVVKHEVTGLVIDSYNKPSSFAKAIDRAF 339
Query: 431 PDDSDVLKKLRNG 443
D + K +N
Sbjct: 340 TDQELMNKMTKNA 352
>sp|P26388|WCAL_SALTY Putative colanic acid biosynthesis glycosyltransferase WcaL
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=wcaL PE=3 SV=1
Length = 406
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 320 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD-- 377
+ I G GP + I + +L+ V + + + +L AD V L S +G D
Sbjct: 256 YRILGIGPWERRLRTLIEQYQLEDVIEMPGFKPSHEVKAMLDDAD--VFLLPSITGTDGD 313
Query: 378 ---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 412
+P+ +++ G+PV + +S I ELV+ K+G L
Sbjct: 314 MEGIPVALMEAMAVGIPVVSTVHSGIPELVEAGKSGWL 351
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,715,517
Number of Sequences: 539616
Number of extensions: 7797404
Number of successful extensions: 18132
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 18057
Number of HSP's gapped (non-prelim): 36
length of query: 474
length of database: 191,569,459
effective HSP length: 121
effective length of query: 353
effective length of database: 126,275,923
effective search space: 44575400819
effective search space used: 44575400819
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)