Query 011970
Match_columns 474
No_of_seqs 247 out of 590
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 19:01:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 3.3E-53 1.1E-57 455.0 40.8 320 87-474 146-609 (611)
2 1nr0_A Actin interacting prote 100.0 6E-53 2.1E-57 452.9 42.0 327 87-474 58-565 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 1E-51 3.5E-56 431.0 44.0 312 86-473 260-577 (577)
4 3ow8_A WD repeat-containing pr 100.0 3.8E-51 1.3E-55 405.4 39.1 288 118-474 22-319 (321)
5 1vyh_C Platelet-activating fac 100.0 4.4E-51 1.5E-55 417.4 37.8 294 110-474 91-409 (410)
6 1got_B GT-beta; complex (GTP-b 100.0 4.1E-50 1.4E-54 398.4 41.3 288 118-473 45-340 (340)
7 2ymu_A WD-40 repeat protein; u 100.0 3.8E-49 1.3E-53 411.6 44.9 311 87-473 220-536 (577)
8 4g56_B MGC81050 protein; prote 100.0 4.6E-50 1.6E-54 403.3 34.8 309 99-474 17-341 (357)
9 2pbi_B Guanine nucleotide-bind 100.0 1.6E-48 5.5E-53 391.0 43.4 288 119-473 55-354 (354)
10 4gqb_B Methylosome protein 50; 100.0 5E-49 1.7E-53 396.5 38.6 299 109-474 15-329 (344)
11 3iz6_a 40S ribosomal protein R 100.0 7.6E-50 2.6E-54 403.0 32.2 304 107-474 45-373 (380)
12 2ynn_A Coatomer subunit beta'; 100.0 2.4E-48 8.3E-53 379.9 37.0 285 119-473 4-299 (304)
13 3frx_A Guanine nucleotide-bind 100.0 4.4E-47 1.5E-51 374.1 41.8 296 119-474 8-315 (319)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-47 6.7E-52 380.6 37.2 292 117-474 4-333 (345)
15 1vyh_C Platelet-activating fac 100.0 1.2E-47 4E-52 392.1 35.8 278 86-398 106-409 (410)
16 1erj_A Transcriptional repress 100.0 5.2E-47 1.8E-51 384.0 39.7 285 121-473 58-386 (393)
17 1r5m_A SIR4-interacting protei 100.0 4.8E-47 1.6E-51 375.0 38.4 317 88-474 45-423 (425)
18 3ow8_A WD repeat-containing pr 100.0 1.4E-46 4.8E-51 372.6 40.2 276 87-398 31-319 (321)
19 1got_B GT-beta; complex (GTP-b 100.0 5.6E-46 1.9E-50 368.7 39.8 277 87-397 54-340 (340)
20 2ynn_A Coatomer subunit beta'; 100.0 5.3E-46 1.8E-50 363.4 38.3 289 63-400 3-302 (304)
21 4ery_A WD repeat-containing pr 100.0 2.5E-45 8.6E-50 355.8 42.3 290 118-474 13-310 (312)
22 2hes_X YDR267CP; beta-propelle 100.0 6.4E-46 2.2E-50 367.5 38.0 289 117-474 3-326 (330)
23 2pm9_A Protein WEB1, protein t 100.0 8.1E-48 2.8E-52 383.0 24.2 345 91-474 15-412 (416)
24 4aow_A Guanine nucleotide-bind 100.0 5.8E-45 2E-49 352.0 42.4 314 103-474 9-335 (340)
25 1pgu_A Actin interacting prote 100.0 3.1E-45 1.1E-49 381.8 42.0 317 87-474 159-612 (615)
26 2xzm_R RACK1; ribosome, transl 100.0 4.5E-45 1.6E-49 362.0 39.2 299 118-474 11-338 (343)
27 4gqb_B Methylosome protein 50; 100.0 2.2E-45 7.5E-50 370.0 36.8 282 87-403 29-334 (344)
28 2pbi_B Guanine nucleotide-bind 100.0 5.4E-45 1.9E-49 365.4 39.4 278 87-397 63-354 (354)
29 1gxr_A ESG1, transducin-like e 100.0 2E-44 6.9E-49 346.1 41.1 319 87-474 8-335 (337)
30 2oaj_A Protein SNI1; WD40 repe 100.0 8.8E-46 3E-50 418.3 36.5 321 86-474 56-603 (902)
31 3iz6_a 40S ribosomal protein R 100.0 6.6E-46 2.3E-50 374.3 30.8 284 87-402 65-377 (380)
32 3frx_A Guanine nucleotide-bind 100.0 8.8E-45 3E-49 357.7 36.4 282 87-401 16-318 (319)
33 3gre_A Serine/threonine-protei 100.0 1.8E-45 6E-50 372.4 30.6 340 98-473 39-437 (437)
34 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-46 4.4E-51 402.6 22.3 311 99-474 174-515 (524)
35 2oaj_A Protein SNI1; WD40 repe 100.0 1E-45 3.6E-50 417.8 30.7 323 87-474 97-659 (902)
36 4g56_B MGC81050 protein; prote 100.0 4.9E-45 1.7E-49 366.7 31.7 283 86-401 40-344 (357)
37 3sfz_A APAF-1, apoptotic pepti 100.0 7.5E-44 2.6E-48 406.4 45.4 364 87-474 614-1156(1249)
38 4h5i_A Guanine nucleotide-exch 100.0 1.8E-44 6.1E-49 364.2 33.2 286 130-474 15-341 (365)
39 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.7E-44 2E-48 355.6 35.6 285 90-407 18-342 (345)
40 2hes_X YDR267CP; beta-propelle 100.0 1.3E-43 4.6E-48 350.8 37.9 282 87-400 13-328 (330)
41 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7.1E-43 2.4E-47 356.2 43.4 302 92-474 123-440 (445)
42 1erj_A Transcriptional repress 100.0 2.2E-43 7.4E-48 357.5 36.3 277 87-399 63-388 (393)
43 2xzm_R RACK1; ribosome, transl 100.0 1.2E-43 4E-48 351.8 33.1 266 98-402 39-342 (343)
44 3ei3_B DNA damage-binding prot 100.0 1.4E-43 4.8E-48 352.4 32.5 306 113-474 58-380 (383)
45 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-44 6.7E-49 411.2 29.0 316 87-474 839-1247(1249)
46 4ery_A WD repeat-containing pr 100.0 3E-42 1E-46 334.2 39.9 278 87-398 22-310 (312)
47 3vl1_A 26S proteasome regulato 100.0 4.6E-43 1.6E-47 350.7 34.6 312 93-474 61-417 (420)
48 3zwl_B Eukaryotic translation 100.0 3.1E-42 1.1E-46 334.2 39.3 298 120-474 24-344 (369)
49 3v7d_B Cell division control p 100.0 3.5E-42 1.2E-46 351.0 41.6 310 87-472 120-459 (464)
50 4aow_A Guanine nucleotide-bind 100.0 1.6E-42 5.4E-47 335.0 36.3 279 87-402 37-339 (340)
51 3dm0_A Maltose-binding peripla 100.0 2.2E-42 7.5E-47 374.7 41.7 304 122-474 376-691 (694)
52 3k26_A Polycomb protein EED; W 100.0 5.6E-43 1.9E-47 339.9 29.7 288 122-474 11-364 (366)
53 3odt_A Protein DOA1; ubiquitin 100.0 2.6E-41 8.9E-46 321.9 40.7 278 119-474 9-294 (313)
54 1pgu_A Actin interacting prote 100.0 8.7E-42 3E-46 355.8 39.3 345 87-473 17-399 (615)
55 3i2n_A WD repeat-containing pr 100.0 3.4E-42 1.2E-46 334.0 31.0 292 119-474 8-351 (357)
56 1r5m_A SIR4-interacting protei 100.0 1.3E-41 4.5E-46 336.1 35.7 299 107-474 24-359 (425)
57 4e54_B DNA damage-binding prot 100.0 1.5E-42 5.1E-47 355.3 29.5 302 120-474 111-428 (435)
58 1sq9_A Antiviral protein SKI8; 100.0 1.2E-41 4.1E-46 337.2 34.8 299 121-474 9-393 (397)
59 4a11_B DNA excision repair pro 100.0 7.8E-42 2.7E-46 336.7 32.9 309 105-474 20-363 (408)
60 4ggc_A P55CDC, cell division c 100.0 3.7E-41 1.3E-45 322.3 35.4 274 132-474 28-313 (318)
61 3mkq_A Coatomer beta'-subunit; 100.0 6.8E-41 2.3E-45 363.5 41.1 292 63-403 3-305 (814)
62 2pm7_B Protein transport prote 100.0 1.4E-41 4.7E-46 331.0 30.9 236 184-473 8-282 (297)
63 1sq9_A Antiviral protein SKI8; 100.0 6.1E-41 2.1E-45 332.2 35.0 285 87-402 15-397 (397)
64 2pm9_A Protein WEB1, protein t 100.0 1.3E-42 4.4E-47 345.6 22.9 283 130-474 13-335 (416)
65 4gga_A P55CDC, cell division c 100.0 1.1E-40 3.8E-45 339.3 34.3 273 132-474 108-393 (420)
66 4h5i_A Guanine nucleotide-exch 100.0 1.2E-40 4E-45 336.3 33.8 284 88-401 14-344 (365)
67 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-40 4.9E-45 325.2 32.4 299 128-473 7-358 (372)
68 2w18_A PALB2, fancn, partner a 100.0 1.2E-40 4.2E-45 341.4 33.1 271 98-474 53-355 (356)
69 3vl1_A 26S proteasome regulato 100.0 3.4E-41 1.2E-45 337.2 27.2 272 132-473 59-362 (420)
70 3zwl_B Eukaryotic translation 100.0 6.9E-40 2.4E-44 317.7 35.5 285 87-409 31-355 (369)
71 3bg1_A Protein SEC13 homolog; 100.0 1.7E-41 5.7E-46 333.8 24.3 236 184-473 12-290 (316)
72 3odt_A Protein DOA1; ubiquitin 100.0 2.1E-39 7.2E-44 308.8 37.7 280 87-408 17-304 (313)
73 3dm0_A Maltose-binding peripla 100.0 7.6E-40 2.6E-44 354.8 39.2 280 87-399 381-692 (694)
74 3ei3_B DNA damage-binding prot 100.0 4.2E-40 1.4E-44 327.3 32.4 277 87-400 72-382 (383)
75 1k8k_C P40, ARP2/3 complex 41 100.0 4.1E-40 1.4E-44 321.9 31.5 283 87-403 7-364 (372)
76 3k26_A Polycomb protein EED; W 100.0 4.1E-40 1.4E-44 319.7 29.8 278 87-400 17-366 (366)
77 4a11_B DNA excision repair pro 100.0 7.9E-40 2.7E-44 322.3 31.3 290 87-411 42-376 (408)
78 2j04_B YDR362CP, TAU91; beta p 100.0 2.4E-41 8.2E-46 361.9 20.8 265 117-474 123-426 (524)
79 3dwl_C Actin-related protein 2 100.0 4.4E-41 1.5E-45 332.4 20.8 309 128-474 10-377 (377)
80 4gga_A P55CDC, cell division c 100.0 6.5E-39 2.2E-43 326.3 37.3 293 82-412 99-407 (420)
81 3i2n_A WD repeat-containing pr 100.0 1E-39 3.5E-44 316.6 28.2 283 87-404 17-357 (357)
82 3vu4_A KMHSV2; beta-propeller 100.0 5.3E-39 1.8E-43 322.0 34.3 301 112-473 3-333 (355)
83 3mmy_A MRNA export factor; mRN 100.0 6.9E-39 2.3E-43 310.6 33.6 299 108-473 19-343 (368)
84 1gxr_A ESG1, transducin-like e 100.0 4E-38 1.4E-42 302.3 38.4 275 87-398 50-335 (337)
85 2j04_A TAU60, YPL007P, hypothe 100.0 2.1E-40 7.1E-45 358.4 24.8 305 89-465 16-350 (588)
86 2pm7_B Protein transport prote 100.0 4E-39 1.4E-43 313.6 31.2 245 121-399 2-284 (297)
87 1yfq_A Cell cycle arrest prote 100.0 1.1E-39 3.9E-44 315.9 27.2 277 127-471 9-319 (342)
88 3dw8_B Serine/threonine-protei 100.0 1.9E-39 6.6E-44 326.4 29.4 316 128-473 27-443 (447)
89 3v7d_B Cell division control p 100.0 5.2E-38 1.8E-42 320.1 39.8 278 119-474 112-419 (464)
90 4e54_B DNA damage-binding prot 100.0 2.9E-40 9.8E-45 338.3 21.5 282 87-404 118-434 (435)
91 3gre_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43 326.6 28.4 280 87-397 62-437 (437)
92 4aez_A CDC20, WD repeat-contai 100.0 3.9E-38 1.3E-42 318.1 35.4 273 132-474 96-378 (401)
93 3mkq_A Coatomer beta'-subunit; 100.0 2.6E-38 8.9E-43 343.2 35.4 284 120-473 5-299 (814)
94 4aez_A CDC20, WD repeat-contai 100.0 8.2E-38 2.8E-42 315.7 35.8 283 91-411 96-391 (401)
95 3f3f_A Nucleoporin SEH1; struc 100.0 4.7E-38 1.6E-42 299.6 31.7 238 183-474 9-335 (351)
96 4ggc_A P55CDC, cell division c 100.0 3.6E-37 1.2E-41 294.7 37.8 270 94-401 31-316 (318)
97 3dwl_C Actin-related protein 2 100.0 2E-39 6.9E-44 320.4 22.4 244 67-342 5-280 (377)
98 3bg1_A Protein SEC13 homolog; 100.0 2.8E-39 9.7E-44 317.9 23.1 257 124-412 9-308 (316)
99 1p22_A F-BOX/WD-repeat protein 100.0 3.7E-38 1.3E-42 321.6 32.1 265 128-474 132-412 (435)
100 1p22_A F-BOX/WD-repeat protein 100.0 5.2E-38 1.8E-42 320.5 32.8 276 87-409 132-423 (435)
101 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.9E-37 1.7E-41 313.1 39.7 283 113-474 103-389 (445)
102 1l0q_A Surface layer protein; 100.0 9.2E-36 3.1E-40 295.7 43.0 276 98-412 2-287 (391)
103 3f3f_A Nucleoporin SEH1; struc 100.0 7.3E-37 2.5E-41 291.4 32.2 258 123-411 6-351 (351)
104 3jrp_A Fusion protein of prote 100.0 1.4E-36 4.7E-41 296.3 31.0 237 184-474 10-285 (379)
105 3dw8_B Serine/threonine-protei 100.0 1.7E-36 5.9E-41 304.9 31.8 283 85-398 25-444 (447)
106 3mmy_A MRNA export factor; mRN 100.0 1.8E-36 6.1E-41 293.6 30.5 265 87-378 38-335 (368)
107 3bws_A Protein LP49; two-domai 100.0 7.8E-36 2.7E-40 300.2 35.6 313 103-474 94-430 (433)
108 4gq1_A NUP37; propeller, trans 100.0 4.6E-37 1.6E-41 312.0 25.2 227 193-472 96-388 (393)
109 2j04_A TAU60, YPL007P, hypothe 100.0 3.7E-37 1.3E-41 333.0 25.3 255 129-473 15-294 (588)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.4E-36 3.2E-40 305.6 33.4 282 130-473 5-388 (450)
111 2aq5_A Coronin-1A; WD40 repeat 100.0 6.1E-36 2.1E-40 301.0 27.9 270 100-404 49-346 (402)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 3E-36 1E-40 303.3 25.5 277 133-473 38-339 (402)
113 1yfq_A Cell cycle arrest prote 100.0 1.3E-35 4.5E-40 287.3 28.5 273 87-397 10-321 (342)
114 1nir_A Nitrite reductase; hemo 100.0 1.6E-34 5.5E-39 309.4 38.7 319 98-474 149-512 (543)
115 3jrp_A Fusion protein of prote 100.0 3.4E-35 1.2E-39 286.4 30.1 253 118-405 1-292 (379)
116 3vu4_A KMHSV2; beta-propeller 100.0 5.8E-35 2E-39 292.6 30.4 227 184-474 18-269 (355)
117 3lrv_A PRE-mRNA-splicing facto 100.0 4.5E-36 1.5E-40 296.8 20.6 225 196-473 46-289 (343)
118 1l0q_A Surface layer protein; 100.0 1.9E-33 6.6E-38 279.0 37.9 254 161-474 12-273 (391)
119 3lrv_A PRE-mRNA-splicing facto 100.0 2E-35 6.9E-40 292.2 23.3 267 98-472 48-329 (343)
120 2xyi_A Probable histone-bindin 100.0 9.6E-34 3.3E-38 290.0 31.3 238 184-474 127-408 (430)
121 4gq1_A NUP37; propeller, trans 100.0 2.6E-34 8.9E-39 291.8 25.8 238 131-398 91-387 (393)
122 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-33 6E-38 288.7 30.0 254 189-474 8-337 (450)
123 3jro_A Fusion protein of prote 100.0 1.7E-33 5.8E-38 310.5 24.3 237 184-474 8-283 (753)
124 3bws_A Protein LP49; two-domai 100.0 1.5E-31 5E-36 269.0 34.9 274 91-399 125-431 (433)
125 2w18_A PALB2, fancn, partner a 100.0 2.3E-32 8E-37 280.1 28.8 237 66-341 79-355 (356)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.7E-31 1.3E-35 272.0 34.6 293 99-458 76-410 (415)
127 2ecf_A Dipeptidyl peptidase IV 100.0 2.6E-31 8.8E-36 287.3 30.3 315 88-473 36-456 (741)
128 2xyi_A Probable histone-bindin 100.0 5.1E-31 1.7E-35 269.8 26.6 243 127-402 126-412 (430)
129 1nir_A Nitrite reductase; hemo 100.0 5.5E-30 1.9E-34 274.3 35.4 295 91-411 181-525 (543)
130 3jro_A Fusion protein of prote 100.0 1.7E-31 5.9E-36 294.5 24.2 247 122-403 3-288 (753)
131 1xfd_A DIP, dipeptidyl aminope 100.0 3.8E-30 1.3E-34 277.0 23.6 309 98-463 28-427 (723)
132 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.7E-29 1.3E-33 257.1 28.2 287 131-474 64-385 (415)
133 1k32_A Tricorn protease; prote 100.0 7.9E-29 2.7E-33 281.7 33.5 329 87-473 51-499 (1045)
134 1pby_B Quinohemoprotein amine 100.0 2.6E-28 8.7E-33 234.6 31.4 279 98-411 1-321 (337)
135 3vgz_A Uncharacterized protein 100.0 1.7E-27 5.9E-32 231.3 37.5 274 130-466 41-334 (353)
136 1k32_A Tricorn protease; prote 100.0 2.8E-28 9.5E-33 277.2 36.1 316 88-474 14-459 (1045)
137 2z3z_A Dipeptidyl aminopeptida 100.0 8.4E-29 2.9E-33 266.7 28.9 307 94-474 31-433 (706)
138 3u4y_A Uncharacterized protein 100.0 2.1E-26 7.1E-31 223.2 38.0 280 98-411 10-314 (331)
139 2ecf_A Dipeptidyl peptidase IV 100.0 2.7E-28 9.3E-33 263.7 27.1 281 129-473 36-410 (741)
140 1xfd_A DIP, dipeptidyl aminope 100.0 1.4E-28 4.8E-33 264.7 19.6 277 131-473 18-390 (723)
141 3u4y_A Uncharacterized protein 100.0 1.6E-26 5.3E-31 224.1 31.3 278 135-474 3-302 (331)
142 3o4h_A Acylamino-acid-releasin 100.0 4E-28 1.4E-32 256.9 21.3 275 118-473 10-312 (582)
143 1ri6_A Putative isomerase YBHE 100.0 5.1E-26 1.8E-30 219.0 33.5 276 100-409 7-321 (343)
144 2ojh_A Uncharacterized protein 100.0 9.4E-27 3.2E-31 217.5 22.9 257 161-467 22-293 (297)
145 1z68_A Fibroblast activation p 100.0 1.3E-27 4.4E-32 258.4 18.8 313 98-473 27-440 (719)
146 1ri6_A Putative isomerase YBHE 99.9 2.2E-25 7.6E-30 214.6 31.2 257 161-473 15-305 (343)
147 3o4h_A Acylamino-acid-releasin 99.9 2.3E-26 7.8E-31 243.4 25.9 279 88-407 21-320 (582)
148 1pby_B Quinohemoprotein amine 99.9 1.2E-25 4.1E-30 215.9 28.0 252 161-474 11-308 (337)
149 2z3z_A Dipeptidyl aminopeptida 99.9 3.7E-25 1.2E-29 238.3 31.3 286 89-407 82-441 (706)
150 2ojh_A Uncharacterized protein 99.9 2.3E-25 7.8E-30 208.1 25.7 249 103-378 17-291 (297)
151 3vgz_A Uncharacterized protein 99.9 5.2E-24 1.8E-28 206.8 35.8 267 88-378 40-333 (353)
152 3hfq_A Uncharacterized protein 99.9 2.7E-24 9.4E-29 211.0 32.7 261 161-473 16-314 (347)
153 3hfq_A Uncharacterized protein 99.9 4.9E-24 1.7E-28 209.2 34.0 269 106-405 14-324 (347)
154 1jmx_B Amine dehydrogenase; ox 99.9 9.7E-25 3.3E-29 211.1 27.3 279 98-410 11-335 (349)
155 3pe7_A Oligogalacturonate lyas 99.9 1.3E-24 4.5E-29 215.1 26.7 320 112-473 14-379 (388)
156 1z68_A Fibroblast activation p 99.9 3.2E-26 1.1E-30 247.5 15.1 276 133-473 19-388 (719)
157 1jmx_B Amine dehydrogenase; ox 99.9 2.2E-24 7.6E-29 208.6 25.4 229 191-474 5-323 (349)
158 3scy_A Hypothetical bacterial 99.9 1.6E-22 5.6E-27 199.8 32.8 257 161-473 27-334 (361)
159 3scy_A Hypothetical bacterial 99.9 8.2E-22 2.8E-26 194.8 34.1 269 106-406 25-345 (361)
160 3c5m_A Oligogalacturonate lyas 99.9 9.6E-24 3.3E-28 208.1 19.8 316 112-473 14-379 (396)
161 4a5s_A Dipeptidyl peptidase 4 99.9 3.6E-23 1.2E-27 226.9 23.9 281 98-406 28-359 (740)
162 1jof_A Carboxy-CIS,CIS-muconat 99.9 9.8E-23 3.3E-27 203.9 24.6 241 187-473 41-338 (365)
163 1q7f_A NHL, brain tumor CG1071 99.9 2.4E-21 8.3E-26 185.3 32.3 237 184-474 28-278 (286)
164 2oiz_A Aromatic amine dehydrog 99.9 3.3E-21 1.1E-25 194.9 32.7 273 106-412 29-348 (361)
165 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.3E-21 7.9E-26 193.9 30.8 273 100-406 4-346 (365)
166 3azo_A Aminopeptidase; POP fam 99.9 8.3E-22 2.8E-26 210.6 28.0 295 87-411 22-380 (662)
167 4a5s_A Dipeptidyl peptidase 4 99.9 5.5E-23 1.9E-27 225.5 18.1 232 190-473 21-350 (740)
168 3fvz_A Peptidyl-glycine alpha- 99.9 2.7E-21 9.4E-26 191.4 28.4 245 185-473 23-319 (329)
169 2oit_A Nucleoporin 214KDA; NH2 99.9 1.1E-21 3.7E-26 203.8 23.3 207 189-401 40-279 (434)
170 3pe7_A Oligogalacturonate lyas 99.9 2.3E-21 7.8E-26 191.8 22.5 273 98-398 47-380 (388)
171 2gop_A Trilobed protease; beta 99.9 4.2E-19 1.4E-23 173.3 33.4 272 91-412 17-341 (347)
172 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-21 4.5E-26 203.2 15.1 213 208-474 23-276 (434)
173 2gop_A Trilobed protease; beta 99.9 4.6E-19 1.6E-23 173.1 31.3 266 130-473 15-328 (347)
174 1q7f_A NHL, brain tumor CG1071 99.9 4E-19 1.4E-23 169.9 29.9 241 128-401 28-281 (286)
175 3fvz_A Peptidyl-glycine alpha- 99.9 3.7E-19 1.3E-23 176.1 28.4 239 89-344 24-323 (329)
176 3c5m_A Oligogalacturonate lyas 99.8 8.7E-20 3E-24 179.8 21.3 259 98-378 47-370 (396)
177 3azo_A Aminopeptidase; POP fam 99.8 6.2E-19 2.1E-23 188.4 28.7 284 124-472 19-363 (662)
178 2bkl_A Prolyl endopeptidase; m 99.8 1.2E-18 4.2E-23 189.6 29.9 283 98-411 79-407 (695)
179 2oiz_A Aromatic amine dehydrog 99.8 1E-18 3.6E-23 176.5 26.1 265 161-474 31-332 (361)
180 3e5z_A Putative gluconolactona 99.8 9.7E-18 3.3E-22 161.7 27.2 227 185-471 27-282 (296)
181 2dg1_A DRP35, lactonase; beta 99.8 4E-18 1.4E-22 166.1 24.6 270 130-466 6-300 (333)
182 2xdw_A Prolyl endopeptidase; a 99.8 4.8E-17 1.7E-21 177.3 35.8 258 128-411 123-426 (710)
183 2xdw_A Prolyl endopeptidase; a 99.8 6E-18 2E-22 184.4 27.7 237 187-474 126-412 (710)
184 2bkl_A Prolyl endopeptidase; m 99.8 1.8E-18 6E-23 188.4 21.1 232 187-474 122-395 (695)
185 3dsm_A Uncharacterized protein 99.8 6.4E-17 2.2E-21 160.7 28.7 252 161-473 17-299 (328)
186 3no2_A Uncharacterized protein 99.8 6.9E-17 2.4E-21 158.1 27.6 215 198-464 5-231 (276)
187 2dg1_A DRP35, lactonase; beta 99.8 1.3E-16 4.5E-21 155.4 29.3 265 91-378 8-299 (333)
188 1yr2_A Prolyl oligopeptidase; 99.8 1.1E-16 3.6E-21 175.8 30.9 283 98-409 118-449 (741)
189 1qks_A Cytochrome CD1 nitrite 99.8 3.9E-15 1.3E-19 161.0 39.8 321 98-473 167-535 (567)
190 2z2n_A Virginiamycin B lyase; 99.8 1.9E-14 6.6E-19 136.0 39.3 269 128-471 13-291 (299)
191 1yr2_A Prolyl oligopeptidase; 99.8 9E-17 3.1E-21 176.4 25.1 275 138-474 115-439 (741)
192 3e5z_A Putative gluconolactona 99.8 7.4E-16 2.5E-20 148.4 28.3 234 118-378 17-276 (296)
193 1rwi_B Serine/threonine-protei 99.7 4.7E-16 1.6E-20 146.3 25.0 230 187-473 25-261 (270)
194 3dsm_A Uncharacterized protein 99.7 4.7E-15 1.6E-19 147.2 30.8 253 91-366 46-319 (328)
195 2z2n_A Virginiamycin B lyase; 99.7 1.4E-13 4.7E-18 130.2 37.4 272 89-402 15-297 (299)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 6.6E-15 2.3E-19 141.2 28.3 231 184-473 16-296 (314)
197 3hrp_A Uncharacterized protein 99.7 5.9E-15 2E-19 152.3 29.3 254 184-473 129-407 (409)
198 1rwi_B Serine/threonine-protei 99.7 1E-14 3.6E-19 137.1 26.1 236 131-402 25-266 (270)
199 3g4e_A Regucalcin; six bladed 99.7 9.6E-14 3.3E-18 135.2 30.7 224 185-465 12-261 (297)
200 2qe8_A Uncharacterized protein 99.6 5.1E-15 1.7E-19 147.6 19.4 265 130-469 17-314 (343)
201 3no2_A Uncharacterized protein 99.6 1.3E-14 4.5E-19 141.9 21.9 180 235-473 3-192 (276)
202 2qc5_A Streptogramin B lactona 99.6 1.9E-12 6.5E-17 122.3 35.5 262 129-464 19-290 (300)
203 1qks_A Cytochrome CD1 nitrite 99.6 5.6E-13 1.9E-17 144.1 34.4 258 161-473 177-474 (567)
204 2mad_H Methylamine dehydrogena 99.6 6E-12 2E-16 128.5 36.2 266 109-407 48-357 (373)
205 2mad_H Methylamine dehydrogena 99.6 5.6E-12 1.9E-16 128.8 34.3 283 136-474 27-348 (373)
206 3iuj_A Prolyl endopeptidase; h 99.6 3.7E-13 1.3E-17 147.1 27.1 253 128-410 127-414 (693)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.6E-12 5.5E-17 124.5 27.5 235 91-342 20-298 (314)
208 2qc5_A Streptogramin B lactona 99.6 1.5E-11 5.1E-16 116.1 33.6 229 185-473 19-257 (300)
209 2ghs_A AGR_C_1268P; regucalcin 99.6 5.4E-12 1.9E-16 125.0 31.7 220 187-464 50-290 (326)
210 3sjl_D Methylamine dehydrogena 99.6 2.6E-12 8.8E-17 133.2 30.5 282 98-410 44-373 (386)
211 3iuj_A Prolyl endopeptidase; h 99.5 2.7E-13 9.1E-18 148.2 21.7 234 187-473 130-402 (693)
212 1yiq_A Quinohemoprotein alcoho 99.5 2.1E-12 7E-17 142.3 27.2 281 97-411 69-516 (689)
213 2qe8_A Uncharacterized protein 99.5 1.8E-13 6.2E-18 136.4 16.4 221 186-473 17-275 (343)
214 3dr2_A Exported gluconolactona 99.5 7.4E-12 2.5E-16 122.0 26.9 225 185-471 44-302 (305)
215 3hrp_A Uncharacterized protein 99.5 1E-11 3.5E-16 128.1 29.2 234 130-398 131-408 (409)
216 3sjl_D Methylamine dehydrogena 99.5 1.7E-12 5.9E-17 134.5 23.1 289 129-473 32-360 (386)
217 3g4e_A Regucalcin; six bladed 99.5 3.9E-11 1.3E-15 116.7 30.5 226 128-378 11-261 (297)
218 1kb0_A Quinohemoprotein alcoho 99.5 4.2E-11 1.4E-15 131.6 30.6 279 97-411 76-518 (677)
219 3hxj_A Pyrrolo-quinoline quino 99.4 1.3E-11 4.6E-16 118.9 22.1 289 98-472 30-320 (330)
220 2hz6_A Endoplasmic reticulum t 99.4 3.7E-14 1.3E-18 144.0 4.0 188 197-410 8-202 (369)
221 3q7m_A Lipoprotein YFGL, BAMB; 99.4 9.4E-10 3.2E-14 109.4 36.0 295 97-473 52-375 (376)
222 3c75_H MADH, methylamine dehyd 99.4 7.8E-11 2.7E-15 123.5 28.8 268 108-407 99-409 (426)
223 2ghs_A AGR_C_1268P; regucalcin 99.4 3.7E-10 1.3E-14 111.7 31.7 223 131-378 50-291 (326)
224 1mda_H Methylamine dehydrogena 99.4 1.2E-11 3.9E-16 127.3 20.6 274 99-411 33-357 (368)
225 3dr2_A Exported gluconolactona 99.4 9.2E-11 3.2E-15 114.2 26.1 233 118-378 34-296 (305)
226 1xip_A Nucleoporin NUP159; bet 99.4 1E-11 3.5E-16 128.7 19.4 171 188-380 40-235 (388)
227 3c75_H MADH, methylamine dehyd 99.4 1.2E-10 4.2E-15 122.0 25.0 264 161-474 99-400 (426)
228 1xip_A Nucleoporin NUP159; bet 99.3 2.3E-11 7.8E-16 126.1 17.9 168 227-462 38-230 (388)
229 1yiq_A Quinohemoprotein alcoho 99.3 5.9E-10 2E-14 122.7 26.9 238 191-473 117-502 (689)
230 1kb0_A Quinohemoprotein alcoho 99.2 1.1E-09 3.7E-14 120.4 25.4 245 190-473 123-504 (677)
231 2hz6_A Endoplasmic reticulum t 99.2 8.9E-12 3.1E-16 126.4 6.5 224 96-344 7-238 (369)
232 1kv9_A Type II quinohemoprotei 99.1 1.7E-08 5.7E-13 110.7 26.6 278 97-411 65-499 (668)
233 4a2l_A BT_4663, two-component 99.1 1.1E-06 3.7E-11 97.0 40.6 312 91-469 175-520 (795)
234 1npe_A Nidogen, entactin; glyc 99.1 7.3E-07 2.5E-11 84.7 34.2 205 185-410 35-248 (267)
235 1mda_H Methylamine dehydrogena 99.1 1.2E-09 4E-14 112.3 15.5 255 162-474 47-344 (368)
236 3q7m_A Lipoprotein YFGL, BAMB; 99.1 8.1E-08 2.8E-12 95.4 26.7 257 94-397 99-375 (376)
237 2iwa_A Glutamine cyclotransfer 99.0 7.4E-08 2.5E-12 95.0 24.9 215 218-470 9-231 (266)
238 4a2l_A BT_4663, two-component 99.0 3.4E-06 1.2E-10 93.0 40.9 309 88-469 262-608 (795)
239 2p4o_A Hypothetical protein; p 99.0 3.6E-07 1.2E-11 89.2 29.3 223 186-466 32-278 (306)
240 3hxj_A Pyrrolo-quinoline quino 99.0 3.1E-08 1E-12 95.3 20.3 259 90-399 61-323 (330)
241 2ad6_A Methanol dehydrogenase 99.0 3.4E-07 1.2E-11 98.6 29.7 279 97-411 61-505 (571)
242 1fwx_A Nitrous oxide reductase 99.0 5.6E-08 1.9E-12 105.6 22.9 263 101-378 18-407 (595)
243 3v9f_A Two-component system se 98.9 4.6E-06 1.6E-10 91.8 37.9 313 88-469 257-605 (781)
244 1flg_A Protein (quinoprotein e 98.9 1.5E-06 5.1E-11 94.0 32.9 280 97-411 67-527 (582)
245 2iwa_A Glutamine cyclotransfer 98.9 5.7E-07 2E-11 88.7 27.1 194 188-399 23-236 (266)
246 1npe_A Nidogen, entactin; glyc 98.9 1.2E-06 4.3E-11 83.1 28.5 192 198-407 1-205 (267)
247 1kv9_A Type II quinohemoprotei 98.9 1.7E-07 5.8E-12 102.7 25.2 244 191-473 113-485 (668)
248 1w6s_A Methanol dehydrogenase 98.9 1.1E-06 3.7E-11 95.7 29.8 281 97-411 61-514 (599)
249 2ece_A 462AA long hypothetical 98.9 4.6E-07 1.6E-11 95.7 25.3 201 196-408 93-363 (462)
250 1fwx_A Nitrous oxide reductase 98.8 1.3E-07 4.6E-12 102.7 19.3 195 197-411 100-382 (595)
251 3nol_A Glutamine cyclotransfer 98.8 6.5E-07 2.2E-11 88.3 22.3 205 218-464 31-243 (262)
252 2fp8_A Strictosidine synthase; 98.8 2.5E-06 8.4E-11 83.4 25.7 242 185-473 18-310 (322)
253 3nol_A Glutamine cyclotransfer 98.8 1.2E-06 4.3E-11 86.2 23.2 179 190-378 47-244 (262)
254 3mbr_X Glutamine cyclotransfer 98.8 2.8E-06 9.7E-11 82.8 25.5 207 217-464 8-222 (243)
255 3nok_A Glutaminyl cyclase; bet 98.8 7.6E-07 2.6E-11 88.0 21.3 202 219-464 44-253 (268)
256 3v9f_A Two-component system se 98.7 0.0001 3.5E-09 81.0 38.9 314 89-470 163-519 (781)
257 3mbr_X Glutamine cyclotransfer 98.7 8.1E-06 2.8E-10 79.6 25.8 179 190-378 25-223 (243)
258 2xe4_A Oligopeptidase B; hydro 98.7 3.7E-06 1.3E-10 93.1 26.0 245 131-408 175-465 (751)
259 2p4o_A Hypothetical protein; p 98.7 1.9E-05 6.4E-10 76.9 27.8 230 118-377 22-276 (306)
260 3nok_A Glutaminyl cyclase; bet 98.7 3.7E-06 1.3E-10 83.1 22.7 179 190-378 59-254 (268)
261 2fp8_A Strictosidine synthase; 98.6 1.6E-05 5.6E-10 77.5 26.6 196 186-398 80-311 (322)
262 1k3i_A Galactose oxidase precu 98.6 1.1E-05 3.6E-10 87.6 27.0 291 134-465 190-530 (656)
263 2ece_A 462AA long hypothetical 98.6 9.8E-06 3.4E-10 85.6 25.1 241 98-377 96-399 (462)
264 1k3i_A Galactose oxidase precu 98.6 1.5E-05 5.2E-10 86.4 26.8 266 97-378 197-530 (656)
265 3v65_B Low-density lipoprotein 98.6 5.4E-05 1.9E-09 77.1 29.0 206 185-410 115-328 (386)
266 3tc9_A Hypothetical hydrolase; 98.5 5.4E-05 1.8E-09 78.5 27.8 257 184-472 135-426 (430)
267 3v64_C Agrin; beta propeller, 98.5 5.9E-05 2E-09 75.8 26.9 206 185-410 72-285 (349)
268 4hw6_A Hypothetical protein, I 98.5 7.8E-05 2.7E-09 77.5 28.2 257 184-473 137-430 (433)
269 2ad6_A Methanol dehydrogenase 98.5 1.7E-05 5.8E-10 85.4 23.3 244 191-473 111-491 (571)
270 3tc9_A Hypothetical hydrolase; 98.4 0.00027 9.2E-09 73.2 30.3 235 93-341 141-428 (430)
271 3v65_B Low-density lipoprotein 98.4 0.00038 1.3E-08 70.8 30.1 228 106-352 94-328 (386)
272 1ijq_A LDL receptor, low-densi 98.4 0.00041 1.4E-08 68.3 29.4 183 207-407 9-201 (316)
273 3v64_C Agrin; beta propeller, 98.4 0.00049 1.7E-08 69.0 30.2 183 207-407 52-240 (349)
274 2xe4_A Oligopeptidase B; hydro 98.4 4.4E-06 1.5E-10 92.4 16.4 186 187-378 175-387 (751)
275 1ijq_A LDL receptor, low-densi 98.3 0.00078 2.7E-08 66.3 29.8 205 185-410 29-248 (316)
276 1flg_A Protein (quinoprotein e 98.3 0.00022 7.4E-09 77.0 27.5 221 100-331 170-546 (582)
277 3kya_A Putative phosphatase; s 98.3 0.00013 4.5E-09 77.8 24.8 265 184-473 137-472 (496)
278 1w6s_A Methanol dehydrogenase 98.3 8.4E-05 2.9E-09 80.8 22.5 159 190-350 110-350 (599)
279 3sov_A LRP-6, low-density lipo 98.2 0.00094 3.2E-08 66.4 28.1 227 161-410 13-248 (318)
280 4hw6_A Hypothetical protein, I 98.2 0.00074 2.5E-08 70.1 28.2 234 93-341 143-431 (433)
281 3kya_A Putative phosphatase; s 98.2 0.001 3.4E-08 71.0 29.2 251 92-350 142-483 (496)
282 2xbg_A YCF48-like protein; pho 98.2 0.002 6.9E-08 63.7 29.7 265 88-397 35-319 (327)
283 3p5b_L Low density lipoprotein 98.2 0.0057 1.9E-07 62.5 32.8 232 106-353 90-331 (400)
284 3p5b_L Low density lipoprotein 98.1 0.0037 1.3E-07 63.9 30.9 207 185-410 111-330 (400)
285 2xbg_A YCF48-like protein; pho 98.1 0.0059 2E-07 60.3 31.4 272 129-473 35-319 (327)
286 2ism_A Putative oxidoreductase 98.1 0.00058 2E-08 68.7 24.1 141 185-332 30-221 (352)
287 3sov_A LRP-6, low-density lipo 98.0 0.0097 3.3E-07 59.0 28.8 227 107-352 12-248 (318)
288 3s94_A LRP-6, low-density lipo 97.9 0.043 1.5E-06 59.6 37.2 285 90-408 85-430 (619)
289 3a9g_A Putative uncharacterize 97.9 0.0078 2.7E-07 60.6 27.2 142 185-332 28-216 (354)
290 3m0c_C LDL receptor, low-densi 97.8 0.0091 3.1E-07 67.0 29.1 208 185-411 423-643 (791)
291 3amr_A 3-phytase; beta-propell 97.8 0.0034 1.2E-07 64.2 23.1 192 198-408 41-272 (355)
292 3m0c_C LDL receptor, low-densi 97.8 0.029 1E-06 62.9 32.6 230 106-352 402-642 (791)
293 1n7d_A LDL receptor, low-densi 97.8 0.00012 4.1E-09 80.7 12.2 205 185-409 405-623 (699)
294 3s94_A LRP-6, low-density lipo 97.7 0.0077 2.6E-07 65.5 25.7 206 185-410 39-253 (619)
295 2ism_A Putative oxidoreductase 97.7 0.0076 2.6E-07 60.4 22.9 219 132-377 33-333 (352)
296 1n7d_A LDL receptor, low-densi 97.7 0.00013 4.6E-09 80.4 10.8 184 206-407 384-577 (699)
297 4a0p_A LRP6, LRP-6, low-densit 97.6 0.079 2.7E-06 57.6 32.0 227 106-351 13-246 (628)
298 4a0p_A LRP6, LRP-6, low-densit 97.6 0.036 1.2E-06 60.3 29.2 188 200-407 8-203 (628)
299 3qqz_A Putative uncharacterize 97.6 0.0065 2.2E-07 59.2 20.5 190 124-332 22-242 (255)
300 3qqz_A Putative uncharacterize 97.6 0.026 8.8E-07 55.0 24.4 182 188-375 29-240 (255)
301 2g8s_A Glucose/sorbosone dehyd 97.4 0.038 1.3E-06 55.4 23.5 143 185-332 17-216 (353)
302 3amr_A 3-phytase; beta-propell 97.3 0.035 1.2E-06 56.8 22.1 171 250-473 50-260 (355)
303 3das_A Putative oxidoreductase 97.3 0.18 6.3E-06 51.1 27.0 144 184-332 30-220 (347)
304 3a9g_A Putative uncharacterize 97.2 0.047 1.6E-06 54.9 21.4 138 227-376 29-215 (354)
305 2p9w_A MAL S 1 allergenic prot 96.8 0.14 4.7E-06 52.0 21.0 171 186-399 13-214 (334)
306 3sre_A PON1, serum paraoxonase 96.4 1 3.6E-05 45.6 25.0 181 187-377 51-285 (355)
307 3sre_A PON1, serum paraoxonase 96.3 0.52 1.8E-05 47.9 21.7 138 249-402 82-255 (355)
308 3das_A Putative oxidoreductase 96.0 1.5 5.1E-05 44.3 25.7 229 91-332 34-326 (347)
309 2p9w_A MAL S 1 allergenic prot 96.0 0.41 1.4E-05 48.4 19.0 158 274-473 16-212 (334)
310 2vpj_A Kelch-like protein 12; 94.9 2.1 7.2E-05 40.3 19.0 193 196-404 13-235 (301)
311 2wg3_C Hedgehog-interacting pr 94.8 0.38 1.3E-05 50.5 14.5 74 305-378 5-92 (463)
312 1cru_A Protein (soluble quinop 94.7 0.81 2.8E-05 47.6 16.5 74 305-378 18-100 (454)
313 1cru_A Protein (soluble quinop 94.6 3.4 0.00012 42.9 21.0 103 270-378 26-163 (454)
314 2g8s_A Glucose/sorbosone dehyd 94.6 4 0.00014 40.5 26.9 233 92-332 21-341 (353)
315 3ei3_A DNA damage-binding prot 94.5 9.5 0.00032 44.5 36.1 213 207-472 714-995 (1158)
316 3pbp_A Nucleoporin NUP82; beta 94.5 3.3 0.00011 43.5 20.2 152 281-470 30-206 (452)
317 3ei3_A DNA damage-binding prot 94.2 11 0.00037 43.9 29.6 226 106-341 713-997 (1158)
318 1tl2_A L10, protein (tachylect 93.9 1.3 4.5E-05 42.6 14.7 107 313-469 40-156 (236)
319 3s25_A Hypothetical 7-bladed b 93.8 2.8 9.6E-05 41.1 17.4 110 249-377 87-202 (302)
320 2vpj_A Kelch-like protein 12; 93.6 4.9 0.00017 37.8 19.4 195 197-403 62-281 (301)
321 2xzh_A Clathrin heavy chain 1; 91.6 13 0.00045 37.8 29.0 198 195-411 75-301 (365)
322 2xn4_A Kelch-like protein 2; s 91.3 9.7 0.00033 35.8 19.2 192 197-403 61-279 (302)
323 3pbp_A Nucleoporin NUP82; beta 91.2 5.1 0.00018 42.0 15.9 130 193-328 27-194 (452)
324 2xn4_A Kelch-like protein 2; s 91.1 10 0.00035 35.6 20.8 196 197-404 15-233 (302)
325 3s25_A Hypothetical 7-bladed b 91.0 12 0.00042 36.5 23.1 193 134-350 57-262 (302)
326 4gq2_M Nucleoporin NUP120; bet 90.7 0.97 3.3E-05 51.5 10.9 37 361-408 238-274 (950)
327 1bpo_A Protein (clathrin); cla 90.2 21 0.00071 37.8 28.3 198 195-410 74-299 (494)
328 3ott_A Two-component system se 89.2 27 0.00093 37.6 39.0 256 88-375 21-295 (758)
329 3ott_A Two-component system se 88.7 29 0.001 37.4 38.9 312 90-469 104-442 (758)
330 3ii7_A Kelch-like protein 7; p 88.6 16 0.00055 34.3 19.1 193 197-403 55-275 (306)
331 2be1_A Serine/threonine-protei 88.3 5.3 0.00018 40.2 13.1 110 200-310 12-138 (339)
332 3ii7_A Kelch-like protein 7; p 88.2 17 0.00058 34.1 21.0 194 198-403 12-228 (306)
333 1tl2_A L10, protein (tachylect 87.9 6.2 0.00021 38.0 12.5 98 271-376 41-152 (236)
334 2wg3_C Hedgehog-interacting pr 86.0 15 0.00051 38.3 15.4 113 262-378 5-158 (463)
335 3sbq_A Nitrous-oxide reductase 85.9 4.1 0.00014 44.3 11.0 101 294-411 299-429 (638)
336 1zgk_A Kelch-like ECH-associat 84.9 26 0.0009 33.0 16.9 193 197-404 70-291 (308)
337 1zgk_A Kelch-like ECH-associat 84.2 28 0.00096 32.8 17.7 195 196-404 23-244 (308)
338 4hvt_A Ritya.17583.B, post-pro 83.9 55 0.0019 35.9 20.8 190 192-402 136-383 (711)
339 4gq2_M Nucleoporin NUP120; bet 83.7 26 0.00089 39.8 17.1 35 189-224 239-273 (950)
340 1xi4_A Clathrin heavy chain; a 83.3 77 0.0026 38.2 20.9 193 196-406 75-295 (1630)
341 3sbq_A Nitrous-oxide reductase 81.4 17 0.00059 39.5 13.5 125 275-407 327-484 (638)
342 4fhn_B Nucleoporin NUP120; pro 79.8 1.4 4.7E-05 51.1 4.8 37 361-408 240-276 (1139)
343 2xzh_A Clathrin heavy chain 1; 77.6 65 0.0022 32.8 18.0 149 207-412 48-200 (365)
344 3zwu_A Alkaline phosphatase PH 75.1 8.5 0.00029 41.7 9.1 69 362-463 479-548 (592)
345 4a9v_A PHOX; hydrolase, beta-p 70.7 14 0.00048 40.0 9.4 71 361-464 478-549 (592)
346 3f7f_A Nucleoporin NUP120; nuc 70.6 3.8 0.00013 45.5 5.0 32 367-409 228-259 (729)
347 2uvk_A YJHT; unknown function, 70.5 63 0.0022 30.8 13.4 146 250-410 168-352 (357)
348 2be1_A Serine/threonine-protei 70.4 11 0.00037 37.9 8.0 112 284-410 11-140 (339)
349 3pg0_A Threefoil; symmetric de 65.1 52 0.0018 28.4 10.6 106 291-409 25-139 (165)
350 3f7f_A Nucleoporin NUP120; nuc 65.0 8.5 0.00029 42.8 6.4 37 90-126 223-259 (729)
351 4asc_A Kelch repeat and BTB do 65.0 92 0.0031 29.2 24.0 217 108-332 13-251 (315)
352 4asc_A Kelch repeat and BTB do 64.9 92 0.0032 29.1 22.1 189 200-404 7-225 (315)
353 1zi0_A DNA gyrase subunit A; b 63.1 1.1E+02 0.0039 29.6 15.0 245 98-395 3-273 (307)
354 2zwa_A Leucine carboxyl methyl 62.7 1.7E+02 0.0059 31.5 20.1 203 196-404 396-639 (695)
355 3zwu_A Alkaline phosphatase PH 55.3 42 0.0014 36.2 9.6 62 313-378 475-550 (592)
356 4fhn_B Nucleoporin NUP120; pro 53.9 7.8 0.00027 44.8 3.8 29 98-126 249-277 (1139)
357 1sr4_A CDT A, cytolethal diste 52.6 1.1E+02 0.0039 28.6 10.8 85 209-310 70-167 (206)
358 3l6v_A GYRA, DNA gyrase subuni 52.5 1.9E+02 0.0066 29.0 19.7 113 98-219 7-134 (370)
359 4a9v_A PHOX; hydrolase, beta-p 52.2 53 0.0018 35.6 9.6 63 312-378 474-550 (592)
360 3q6k_A 43.2 kDa salivary prote 52.2 2E+02 0.0069 29.1 21.1 59 252-310 125-198 (381)
361 4hvt_A Ritya.17583.B, post-pro 51.0 2.8E+02 0.0095 30.3 28.3 249 131-408 130-436 (711)
362 2woz_A Kelch repeat and BTB do 47.2 1.8E+02 0.0062 27.1 19.9 191 199-403 17-234 (318)
363 2woz_A Kelch repeat and BTB do 46.7 1.8E+02 0.0063 27.0 21.2 214 110-332 26-261 (318)
364 3vsf_A Ricin B lectin; GH43 CB 44.9 1.3E+02 0.0046 31.3 11.4 107 290-409 358-473 (526)
365 1xi4_A Clathrin heavy chain; a 40.1 4.4E+02 0.015 32.0 15.4 139 207-355 47-200 (1630)
366 2uvk_A YJHT; unknown function, 39.9 2.5E+02 0.0084 26.5 15.9 37 294-332 286-324 (357)
367 3b7f_A Glycosyl hydrolase, BNR 35.6 3.1E+02 0.011 26.5 24.6 152 224-377 52-251 (394)
368 1suu_A DNA gyrase subunit A; t 32.5 3.5E+02 0.012 26.1 21.2 234 91-338 1-279 (312)
369 3b7f_A Glycosyl hydrolase, BNR 31.0 3.7E+02 0.013 25.9 17.2 52 283-334 22-77 (394)
370 3uc1_A DNA gyrase subunit A; D 30.0 4E+02 0.014 26.0 19.3 193 98-301 3-227 (327)
371 3uc1_A DNA gyrase subunit A; D 29.7 4E+02 0.014 26.0 15.2 151 59-219 58-230 (327)
372 3a0c_A Mannose/sialic acid-bin 26.7 2.5E+02 0.0087 22.6 11.8 45 317-374 53-97 (110)
373 3mez_B Mannose-specific lectin 26.3 2.3E+02 0.008 23.0 7.7 73 290-375 31-104 (113)
374 3ef2_A Agglutinin, lectin; bet 25.8 4.7E+02 0.016 25.5 13.7 21 390-410 108-128 (293)
375 4h3o_A Lectin; cadmium, plant 25.7 1.4E+02 0.0048 24.2 6.1 72 289-375 25-98 (105)
376 1zvt_A Topoisomerase IV subuni 23.7 4.4E+02 0.015 24.7 10.1 108 98-218 2-115 (256)
377 3no0_A DNA gyrase subunit A; D 23.4 4.8E+02 0.016 24.7 19.1 176 99-301 2-195 (276)
378 3q6k_A 43.2 kDa salivary prote 22.1 6.1E+02 0.021 25.5 21.7 159 210-377 125-342 (381)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.3e-53 Score=454.96 Aligned_cols=320 Identities=12% Similarity=0.129 Sum_probs=267.1
Q ss_pred ccccEEEEEee--cc-EEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEE
Q 011970 87 KRTKVIEIVAA--RD-IVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 163 (474)
Q Consensus 87 ~~~~V~~i~~s--~~-~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~ 163 (474)
|...|..+.|+ +. .||+++.|++|++||..+++++.+|.+ |...|++|+|+|||++|||+| .| +++
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~-H~~~V~~v~fspdg~~las~s----~D------~~i 214 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-HTKFVHSVRYNPDGSLFASTG----GD------GTI 214 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC-CSSCEEEEEECTTSSEEEEEE----TT------SCE
T ss_pred CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc-ccCceEEEEECCCCCEEEEEE----CC------CcE
Confidence 66789999999 43 699999999999999999999999997 888999999999999999976 55 699
Q ss_pred EEeEeccCCCCCccc---eeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE----------------
Q 011970 164 KIEYIRRGKPDSGFA---LFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI---------------- 224 (474)
Q Consensus 164 ~iw~i~~G~~~~~~~---lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl---------------- 224 (474)
+||++.+|++...+. +....|...|.+|+|+ |||++||+++.|++|||||+.+++++.++
T Consensus 215 ~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s-pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (611)
T 1nr0_A 215 VLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS-PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT 293 (611)
T ss_dssp EEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC
T ss_pred EEEECCCCcEeeeeccccccccccCCCEEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEc
Confidence 999999998743211 0001355678899998 79999999999999999999999876654
Q ss_pred -----------------------------cCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEE-eec----
Q 011970 225 -----------------------------SDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVF-YHL---- 269 (474)
Q Consensus 225 -----------------------------~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl-~~h---- 269 (474)
|...|.+++||| |.+|+++ +.|++|++||+++|+++..+ .+|
T Consensus 294 ~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~---s~D~~v~~Wd~~~~~~~~~~~~~h~~~v 370 (611)
T 1nr0_A 294 KQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSA---DAEGHINSWDISTGISNRVFPDVHATMI 370 (611)
T ss_dssp SSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEETTTCCEEECSSCSCSSCE
T ss_pred CCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEE---eCCCcEEEEECCCCceeeecccCCcceE
Confidence 234699999998 5556655 55899999999998876554 122
Q ss_pred -----------------------------------------------------------------------------Ccc
Q 011970 270 -----------------------------------------------------------------------------LHR 272 (474)
Q Consensus 270 -----------------------------------------------------------------------------~~~ 272 (474)
...
T Consensus 371 ~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~ 450 (611)
T 1nr0_A 371 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYN 450 (611)
T ss_dssp EEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSC
T ss_pred EEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCC
Confidence 123
Q ss_pred eeEEEEEecCCCeEEEEeCCCcEEEEECCCCceE--EeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC--CcEEE
Q 011970 273 NKKVDFIEQFNEKLLVKQENENLQILDVRNAELM--EVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR--GELVT 347 (474)
Q Consensus 273 v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~--~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~--G~ll~ 347 (474)
+.+|+|+ |++..|++++.|++|+|||+.++++. .. .+|...|.+++|||||++|++++ |++|++||+. ++++.
T Consensus 451 v~~va~s-pdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~ 528 (611)
T 1nr0_A 451 SSCVALS-NDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH 528 (611)
T ss_dssp EEEEEEC-TTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC
T ss_pred ceEEEEe-CCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceee
Confidence 4567776 67888888999999999999887653 44 68999999999999999999999 9999999994 77766
Q ss_pred E--eccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe-EE-EEecCC-CCCCCCccccCC
Q 011970 348 S--FEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK-CL-AKINAT-NCSPKVDDELGS 422 (474)
Q Consensus 348 t--l~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~-cl-~tl~gH-~~~~~~~~~~~~ 422 (474)
+ +.+|... |++|+|||||++|||+|. |++|||||+.+++ ++ ..+.+| ..
T Consensus 529 ~~~~~~H~~~-----V~~v~fspdg~~lasgs~-----------D~~v~lW~~~~~~~~~~~~~~~h~~~---------- 582 (611)
T 1nr0_A 529 TNSWTFHTAK-----VACVSWSPDNVRLATGSL-----------DNSVIVWNMNKPSDHPIIIKGAHAMS---------- 582 (611)
T ss_dssp CCCCCCCSSC-----EEEEEECTTSSEEEEEET-----------TSCEEEEETTCTTSCCEEETTSSTTS----------
T ss_pred eeeeeecccc-----eeEEEECCCCCEEEEEEC-----------CCcEEEEECCCcccccchhhccCccc----------
Confidence 5 4459887 799999999999999987 9999999998876 44 788899 54
Q ss_pred CCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 423 SSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++|+|+|||+ ||||+.|++||||+.
T Consensus 583 ------------------------~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 583 ------------------------SVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp ------------------------CEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred ------------------------CeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 899999999999 999999999999984
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6e-53 Score=452.89 Aligned_cols=327 Identities=12% Similarity=0.101 Sum_probs=260.3
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccc--eeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCC--------
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDN-------- 154 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~--~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d-------- 154 (474)
|...|..++|+ |++||+++.||+|+|||+.+++ ++.++.+ |.+.|++|+|+|||+.|++++.+....
T Consensus 58 h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~-~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~ 136 (611)
T 1nr0_A 58 HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPV-FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 136 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEEC-SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT
T ss_pred CCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecc-cCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC
Confidence 44455556665 9999999999999999987654 4557776 678899999999999888776321000
Q ss_pred ------------------cc---c--e----eeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCC
Q 011970 155 ------------------FS---S--L----KCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD 207 (474)
Q Consensus 155 ------------------~s---~--L----k~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D 207 (474)
|+ . | .-.+++||+...+++.. .+. +|..+|.+|+|+ |||++||+++.|
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~---~l~-~H~~~V~~v~fs-pdg~~las~s~D 211 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS---TFG-EHTKFVHSVRYN-PDGSLFASTGGD 211 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE---EEC-CCSSCEEEEEEC-TTSSEEEEEETT
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEee---eec-cccCceEEEEEC-CCCCEEEEEECC
Confidence 00 0 0 00456777766665432 122 356678899998 799999999999
Q ss_pred CcEEEeecCCCeEEEEE---------cCCcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEEEE-----------
Q 011970 208 SIYKVFDLKNYTMLYSI---------SDKHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVF----------- 266 (474)
Q Consensus 208 ~tiKlWdl~tg~~l~tl---------~~~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~tl----------- 266 (474)
++|||||+.+|+++.++ |...|.+|+|||+ .+||++ +.|++|||||+++|++++++
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~---s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~ 288 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA---SADKTIKIWNVATLKVEKTIPVGTRIEDQQL 288 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE---ETTSEEEEEETTTTEEEEEEECCSSGGGCEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEE---eCCCeEEEEeCCCCceeeeecCCCCccceeE
Confidence 99999999999999887 3457999999985 556655 55899999999999887655
Q ss_pred --------------------------------eecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEec-ccc-
Q 011970 267 --------------------------------YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-RTE- 312 (474)
Q Consensus 267 --------------------------------~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l-~~h- 312 (474)
.+|...|.+++|+ |++.+|++++.|++|++||+.++++...+ .+|
T Consensus 289 ~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~s-pdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~ 367 (611)
T 1nr0_A 289 GIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSS-ADGKTLFSADAEGHINSWDISTGISNRVFPDVHA 367 (611)
T ss_dssp EEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS
T ss_pred EEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEe-CCCCEEEEEeCCCcEEEEECCCCceeeecccCCc
Confidence 4688889999998 67889999999999999999998776543 112
Q ss_pred --------------------------------------------------------------------------------
Q 011970 313 -------------------------------------------------------------------------------- 312 (474)
Q Consensus 313 -------------------------------------------------------------------------------- 312 (474)
T Consensus 368 ~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~ 447 (611)
T 1nr0_A 368 TMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI 447 (611)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEEC
T ss_pred ceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeec
Confidence
Q ss_pred CCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcE--EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccC
Q 011970 313 FMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEG 388 (474)
Q Consensus 313 ~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~l--l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s 388 (474)
...+.+++|+|||++||+++ |++|+|||++ +++ +.+ .+|... |++|+|||||++||+++.
T Consensus 448 ~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~-----v~~v~fspdg~~las~s~---------- 511 (611)
T 1nr0_A 448 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAE-----ITSVAFSNNGAFLVATDQ---------- 511 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSC-----EEEEEECTTSSEEEEEET----------
T ss_pred CCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCc-----eEEEEECCCCCEEEEEcC----------
Confidence 23467899999999999999 9999999996 443 345 688876 799999999999999987
Q ss_pred CCCeEEEEeCCC-CeEEEE--ecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcC
Q 011970 389 SAGSINVSSILT-GKCLAK--INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR 465 (474)
Q Consensus 389 ~DgtIklWdi~t-G~cl~t--l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~ 465 (474)
|++|+|||+.+ ++++.+ +.+|+. .|++|+|||||++|||||.
T Consensus 512 -d~~v~~w~~~~~~~~~~~~~~~~H~~----------------------------------~V~~v~fspdg~~lasgs~ 556 (611)
T 1nr0_A 512 -SRKVIPYSVANNFELAHTNSWTFHTA----------------------------------KVACVSWSPDNVRLATGSL 556 (611)
T ss_dssp -TSCEEEEEGGGTTEESCCCCCCCCSS----------------------------------CEEEEEECTTSSEEEEEET
T ss_pred -CCCEEEEEcCCCCceeeeeeeeeccc----------------------------------ceeEEEECCCCCEEEEEEC
Confidence 99999999988 888765 344875 8999999999999999999
Q ss_pred CCcEEEccC
Q 011970 466 HGLVHVWSN 474 (474)
Q Consensus 466 DgtVklWd~ 474 (474)
|++|||||.
T Consensus 557 D~~v~lW~~ 565 (611)
T 1nr0_A 557 DNSVIVWNM 565 (611)
T ss_dssp TSCEEEEET
T ss_pred CCcEEEEEC
Confidence 999999984
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-51 Score=430.99 Aligned_cols=312 Identities=13% Similarity=0.240 Sum_probs=276.4
Q ss_pred cccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEE
Q 011970 86 MKRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 163 (474)
Q Consensus 86 ~~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~ 163 (474)
.|..+|..|.|+ ++.|++++.|+++++|+. +++++.++.+ |...|++++|+|||+.|++++ .| .++
T Consensus 260 ~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~~----~d------~~i 327 (577)
T 2ymu_A 260 GHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDGQTIASAS----DD------KTV 327 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECC-CSSCEEEEEECTTSSEEEEEE----TT------SCE
T ss_pred cCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEec-CCCCeEEEEECCCCCEEEEEe----CC------CeE
Confidence 477788999988 889999999999999996 5899999997 778899999999999999976 45 689
Q ss_pred EEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceE
Q 011970 164 KIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIML 240 (474)
Q Consensus 164 ~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~l 240 (474)
++|++...++ . .+. .+...+..++|+ |||++||+++.|++|+|||. +++++.++. ...|.+++||| +..|
T Consensus 328 ~~w~~~~~~~-~---~~~-~~~~~v~~~~~s-~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l 400 (577)
T 2ymu_A 328 KLWNRNGQHL-Q---TLT-GHSSSVWGVAFS-PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI 400 (577)
T ss_dssp EEEETTSCEE-E---EEC-CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred EEEeCCCCee-E---EEe-CCCCCEEEEEEC-CCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 9999644332 1 122 234556689998 79999999999999999995 778888875 46899999998 4556
Q ss_pred EEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEE
Q 011970 241 LIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFI 320 (474)
Q Consensus 241 a~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~ 320 (474)
+++ +.|++|+|||. +|++++++.+|...+..++|+ |++..|++++.|++|++||+ +++++..+.+|...|.+++
T Consensus 401 ~~~---~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~ 474 (577)
T 2ymu_A 401 ASA---SDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFS-PDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVA 474 (577)
T ss_dssp EEE---ETTSEEEEECT-TCCEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEE
T ss_pred EEE---eCCCEEEEEeC-CCCEEEEecCCCCCeEEEEEC-CCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEE
Confidence 655 45899999995 789999999999999999997 67888888999999999995 7888999999999999999
Q ss_pred EcCCCcEEEEEc-CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCC
Q 011970 321 FLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 399 (474)
Q Consensus 321 Fspdg~llaS~s-D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~ 399 (474)
|+|||++||+++ |++|+|||.+|+++++|++|... |++|+|+|||++||+++. |++|+|||.
T Consensus 475 ~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~-----v~~l~~s~dg~~l~s~~~-----------dg~v~lwd~- 537 (577)
T 2ymu_A 475 FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS-----VRGVAFSPDGQTIASASD-----------DKTVKLWNR- 537 (577)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSC-----EEEEEECTTSSCEEEEET-----------TSEEEEECT-
T ss_pred EcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCC-----EEEEEEcCCCCEEEEEEC-----------cCEEEEEeC-
Confidence 999999999999 99999999999999999999987 799999999999999987 999999995
Q ss_pred CCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 400 TGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 400 tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
+|++++++.+|+. .|++|+|+|||++|+||+.|++|+|||
T Consensus 538 ~~~~~~~~~~h~~----------------------------------~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 538 NGQLLQTLTGHSS----------------------------------SVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TSCEEEEEECCSS----------------------------------CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEcCCCC----------------------------------CEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 8999999999996 899999999999999999999999997
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-51 Score=405.38 Aligned_cols=288 Identities=16% Similarity=0.185 Sum_probs=254.0
Q ss_pred cceeeEeecCCCceEEEEEEeeC----CCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeee-ccccCceEEE
Q 011970 118 NRRICFLNVSPDEVIRSLFYNKN----NDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES-ESLKWPGFVE 192 (474)
Q Consensus 118 g~~l~~l~g~~~~~i~sv~fspd----g~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~-~~~~~~~~V~ 192 (474)
|..++.+++ |.+.|++|+|+|+ +++|+|+| .| ++++||++..+++.. .+.. +|...+.+|+
T Consensus 22 g~~~~~~~~-H~~~V~~v~~~~~~~~~~~~l~tgs----~D------~~v~vW~~~~~~~~~---~~~l~gh~~~v~~~~ 87 (321)
T 3ow8_A 22 GILFKQEQA-HDDAIWSVAWGTNKKENSETVVTGS----LD------DLVKVWKWRDERLDL---QWSLEGHQLGVVSVD 87 (321)
T ss_dssp EEEEEETTS-SSSCEEEEEEC-------CEEEEEE----TT------SCEEEEEEETTEEEE---EEEECCCSSCEEEEE
T ss_pred hheeeeccc-CCCcEEEEEEecCCCCCCCEEEEEc----CC------CCEEEEECCCCCeee---eeeeccCCCCEEEEE
Confidence 455566675 8899999999985 67899976 55 699999998776422 1221 3556677999
Q ss_pred EeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEEEEeec
Q 011970 193 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL 269 (474)
Q Consensus 193 Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~--~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h 269 (474)
|+ +++++|++++.|++|||||+.+++++.++.. ..|+.++|+|+ .+|+++ +.|++|++||+++|+.+.++..|
T Consensus 88 ~~-~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g---~~dg~v~i~~~~~~~~~~~~~~~ 163 (321)
T 3ow8_A 88 IS-HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATG---THVGKVNIFGVESGKKEYSLDTR 163 (321)
T ss_dssp EC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEE---CTTSEEEEEETTTCSEEEEEECS
T ss_pred EC-CCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEE---cCCCcEEEEEcCCCceeEEecCC
Confidence 98 7999999999999999999999999998864 57899999984 555554 55899999999999999999999
Q ss_pred CcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEE
Q 011970 270 LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVT 347 (474)
Q Consensus 270 ~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~ 347 (474)
...+.+++|+ |++..|++++.|++|+|||+++++++.++.+|...|.+++|+||+++|++++ |++|+|||++ ++++.
T Consensus 164 ~~~v~~~~~s-pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 164 GKFILSIAYS-PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp SSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE
T ss_pred CceEEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE
Confidence 8999999997 6788899999999999999999999999999999999999999999999999 9999999995 99999
Q ss_pred EeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCc
Q 011970 348 SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGK 427 (474)
Q Consensus 348 tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~ 427 (474)
++.+|..+ |.+++|+|||++|+|++. |++|+|||+.+++|++++.+|+.
T Consensus 243 ~~~~h~~~-----v~~~~~sp~~~~l~s~s~-----------D~~v~iwd~~~~~~~~~~~~h~~--------------- 291 (321)
T 3ow8_A 243 TLSGHASW-----VLNVAFCPDDTHFVSSSS-----------DKSVKVWDVGTRTCVHTFFDHQD--------------- 291 (321)
T ss_dssp EECCCSSC-----EEEEEECTTSSEEEEEET-----------TSCEEEEETTTTEEEEEECCCSS---------------
T ss_pred EEcCCCCc-----eEEEEECCCCCEEEEEeC-----------CCcEEEEeCCCCEEEEEEcCCCC---------------
Confidence 99999987 789999999999999987 99999999999999999999986
Q ss_pred cccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 428 SKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 428 ~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++|+|+|||+.|+||+.||+|+|||.
T Consensus 292 -------------------~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 292 -------------------QVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp -------------------CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred -------------------cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 8999999999999999999999999984
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.4e-51 Score=417.37 Aligned_cols=294 Identities=17% Similarity=0.270 Sum_probs=261.2
Q ss_pred EEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCce
Q 011970 110 CAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPG 189 (474)
Q Consensus 110 iklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~ 189 (474)
.+.|... .....+|.+ |...|++++|+|+++.|+++| .| .+++|||+.+|++... +. +|...+.
T Consensus 91 ~~~~~~~-~~~~~~l~g-h~~~V~~~~~~p~~~~l~s~s----~D------g~i~vwd~~~~~~~~~---l~-~h~~~V~ 154 (410)
T 1vyh_C 91 PKEWIPR-PPEKYALSG-HRSPVTRVIFHPVFSVMVSAS----ED------ATIKVWDYETGDFERT---LK-GHTDSVQ 154 (410)
T ss_dssp -CCCCCC-SSCSCEEEC-CSSCEEEEEECSSSSEEEEEE----SS------SCEEEEETTTCCCCEE---EC-CCSSCEE
T ss_pred ccccccC-CCceEeecc-cCCcEEEEEEcCCCCEEEEEe----CC------CeEEEEECCCCcEEEE---Ee-ccCCcEE
Confidence 3445432 445667886 789999999999999999976 45 6999999999997542 22 2456778
Q ss_pred EEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEE
Q 011970 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (474)
Q Consensus 190 ~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl 266 (474)
.|+|+ |+|++|++|+.|++|||||+.+++++.++. ...|.+++|+| +..|+++ +.|++|++||+++|+++++|
T Consensus 155 ~v~~~-~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~---s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 155 DISFD-HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSA---SRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp EEEEC-TTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEE---ETTSEEEEEETTTCCEEEEE
T ss_pred EEEEc-CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEE---eCCCeEEEEECCCCcEEEEE
Confidence 99998 799999999999999999999999999886 46899999998 4566655 45899999999999999999
Q ss_pred eecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCC--------------------Cc
Q 011970 267 YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE--------------------NQ 326 (474)
Q Consensus 267 ~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspd--------------------g~ 326 (474)
.+|...+..++|+ +++..+++++.|++|+|||+.++++...+.+|...|.+++|+|+ |+
T Consensus 231 ~~h~~~v~~~~~~-~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 309 (410)
T 1vyh_C 231 TGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP 309 (410)
T ss_dssp ECCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC
T ss_pred eCCCccEEEEEEC-CCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC
Confidence 9999999999997 67788888999999999999999999999999999999999997 77
Q ss_pred EEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 327 LFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 327 llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
+|++++ |++|+|||++ |+++.++.+|..+ |++++|+|+|++|+|++. |++|+|||+.+++|+
T Consensus 310 ~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~-----v~~v~~~~~g~~l~s~s~-----------D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-----VRGVLFHSGGKFILSCAD-----------DKTLRVWDYKNKRCM 373 (410)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSC-----EEEEEECSSSSCEEEEET-----------TTEEEEECCTTSCCC
T ss_pred EEEEEeCCCeEEEEECCCCceEEEEECCCCc-----EEEEEEcCCCCEEEEEeC-----------CCeEEEEECCCCceE
Confidence 899999 9999999995 9999999999988 799999999999999987 999999999999999
Q ss_pred EEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 405 AKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 405 ~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.++.+|.. .|++|+|+|+++.|||||.||+|+||+.
T Consensus 374 ~~~~~h~~----------------------------------~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 374 KTLNAHEH----------------------------------FVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEECCSS----------------------------------CEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEcCCCC----------------------------------cEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 99999986 8999999999999999999999999984
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.1e-50 Score=398.45 Aligned_cols=288 Identities=12% Similarity=0.167 Sum_probs=253.4
Q ss_pred cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCC
Q 011970 118 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 197 (474)
Q Consensus 118 g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~n 197 (474)
.++..+|.| |.+.|++++|+|||+.|+++| .| .+++|||+.+++.... +. .+..++..++|+ |+
T Consensus 45 ~~~~~~l~g-H~~~v~~~~~s~d~~~l~s~s----~D------g~v~iWd~~~~~~~~~---~~-~~~~~v~~~~~s-~~ 108 (340)
T 1got_B 45 MRTRRTLRG-HLAKIYAMHWGTDSRLLLSAS----QD------GKLIIWDSYTTNKVHA---IP-LRSSWVMTCAYA-PS 108 (340)
T ss_dssp CCEEEEECC-CSSCEEEEEECTTSSEEEEEE----TT------TEEEEEETTTCCEEEE---EE-CSSSCEEEEEEC-TT
T ss_pred chhheeecC-CCCceEEEEECCCCCEEEEEe----CC------CcEEEEECCCCCcceE---ee-cCCccEEEEEEC-CC
Confidence 455678887 789999999999999999976 55 6999999999886432 22 234567799998 79
Q ss_pred CeEEEEecCCCcEEEeecCCCe----EEEEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCc
Q 011970 198 GKVLTYSAQDSIYKVFDLKNYT----MLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH 271 (474)
Q Consensus 198 Gk~LaS~s~D~tiKlWdl~tg~----~l~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~ 271 (474)
|++||+|+.|++|++||+.+++ +...+. ...|..++|+|++.++++ +.|++|+|||+++|+++.+|.+|..
T Consensus 109 ~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~---s~d~~i~~wd~~~~~~~~~~~~h~~ 185 (340)
T 1got_B 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS---SGDTTCALWDIETGQQTTTFTGHTG 185 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEE---ETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEE---ECCCcEEEEECCCCcEEEEEcCCCC
Confidence 9999999999999999998763 445554 468999999998888876 4589999999999999999999999
Q ss_pred ceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEe
Q 011970 272 RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF 349 (474)
Q Consensus 272 ~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl 349 (474)
.+.+++|+ |++..+++++.|++|+|||+++++++.++.+|...|.+++|+|+|++|++++ |++|+|||++ ++++.++
T Consensus 186 ~v~~~~~~-~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 186 DVMSLSLA-PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceEEEEEC-CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 99999998 5677888899999999999999999999999999999999999999999999 9999999995 8888887
Q ss_pred ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccc
Q 011970 350 EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSK 429 (474)
Q Consensus 350 ~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~ 429 (474)
..+... +.|.+++|+|||++|++|+. |++|+|||+.+++++.++.+|..
T Consensus 265 ~~~~~~---~~v~~~~~s~~g~~l~~g~~-----------d~~i~vwd~~~~~~~~~~~~h~~----------------- 313 (340)
T 1got_B 265 SHDNII---CGITSVSFSKSGRLLLAGYD-----------DFNCNVWDALKADRAGVLAGHDN----------------- 313 (340)
T ss_dssp CCTTCC---SCEEEEEECTTSSEEEEEET-----------TSEEEEEETTTCCEEEEEECCSS-----------------
T ss_pred ccCCcc---cceEEEEECCCCCEEEEECC-----------CCeEEEEEcccCcEeeEeecCCC-----------------
Confidence 643221 23799999999999999987 99999999999999999999996
Q ss_pred cccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 430 KLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 430 ~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
.|++|+|+|||+.|||||.|++|+|||
T Consensus 314 -----------------~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 314 -----------------RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp -----------------CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -----------------cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 899999999999999999999999997
No 7
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.8e-49 Score=411.63 Aligned_cols=311 Identities=14% Similarity=0.261 Sum_probs=275.1
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
|...|..+.|+ ++.|++++.|+++++|+. +++++.++.+ |...|.+++|+|||+.|++++ .| .+++
T Consensus 220 ~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~-~~~~v~~v~~~~d~~~l~~~~----~d------~~i~ 287 (577)
T 2ymu_A 220 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVNGVAFRPDGQTIASAS----DD------KTVK 287 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECC-CSSCEEEEEECTTSSEEEEEE----TT------SCEE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEec-CCCCEEEEEEcCCCCEEEEEe----CC------CEEE
Confidence 67788999998 889999999999999995 5999999997 778899999999999999876 45 6889
Q ss_pred EeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCC-ceEE
Q 011970 165 IEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPG-IMLL 241 (474)
Q Consensus 165 iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg-~~la 241 (474)
+|+ ..+++.. .+. +|...+..++|+ |||++|++++.|++|++||+.+ ..+.++. ...|.+++|+|+ ..|+
T Consensus 288 ~w~-~~~~~~~---~~~-~h~~~v~~~~~~-~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~ 360 (577)
T 2ymu_A 288 LWN-RNGQLLQ---TLT-GHSSSVWGVAFS-PDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIA 360 (577)
T ss_dssp EEE-TTSCEEE---EEC-CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEe-CCCcEEE---EEe-cCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEE
Confidence 999 4566532 122 245567789998 7999999999999999999754 5555564 568999999984 5555
Q ss_pred EEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEE
Q 011970 242 IFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIF 321 (474)
Q Consensus 242 ~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~F 321 (474)
++ +.|++|++||. +|+++.++.+|...+.+++|+ |++..|++++.|++|+||| .++++++++.+|...|.+++|
T Consensus 361 ~~---~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s-~dg~~l~~~~~d~~v~~~~-~~~~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 361 SA---SDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS-PDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp EE---ETTSEEEEEET-TCCEEEEEECCSSCEEEEEEC-TTSSCEEEEETTSEEEEEC-TTCCEEEEEECCSSCEEEEEE
T ss_pred EE---eCCCEEEEEcC-CCCEEEEecCCCCCeEEEEEC-CCCCEEEEEeCCCEEEEEe-CCCCEEEEecCCCCCeEEEEE
Confidence 54 44789999995 789999999999999999997 6788899999999999999 578899999999999999999
Q ss_pred cCCCcEEEEEc-CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCC
Q 011970 322 LYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT 400 (474)
Q Consensus 322 spdg~llaS~s-D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~t 400 (474)
+||+++|++++ |++|++||.+++++.++.+|... |.+++|+|||++||+++. |++|+||| .+
T Consensus 435 s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~-----v~~~~~spd~~~las~~~-----------d~~i~iw~-~~ 497 (577)
T 2ymu_A 435 SPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSS-----VRGVAFSPDGQTIASASD-----------DKTVKLWN-RN 497 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSC-----EEEEEECTTSCEEEEEET-----------TSEEEEEE-TT
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCC-----EEEEEEcCCCCEEEEEeC-----------CCEEEEEc-CC
Confidence 99999999999 99999999999999999999886 799999999999999987 99999999 58
Q ss_pred CeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 401 GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 401 G~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
|++++++.+|.. .|++|+|||||++||||+.||+|+|||
T Consensus 498 ~~~~~~~~~h~~----------------------------------~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 498 GQLLQTLTGHSS----------------------------------SVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp SCEEEEEECCSS----------------------------------CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCEEEEEeCCCC----------------------------------CEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 999999999986 899999999999999999999999998
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.6e-50 Score=403.26 Aligned_cols=309 Identities=12% Similarity=0.110 Sum_probs=230.5
Q ss_pred cEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCC--CccceeeeEEEEeEeccCCCCCc
Q 011970 99 DIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASD--NFSSLKCRSTKIEYIRRGKPDSG 176 (474)
Q Consensus 99 ~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~--d~s~Lk~~~~~iw~i~~G~~~~~ 176 (474)
..+++++.+...+.|++..... ..|+..|++|+|||||++|||+|.+... | .++++|+..+|.....
T Consensus 17 ~~~~~~~g~~~~~~w~~p~~~p-----~~H~~~V~~v~fSpDG~~las~s~d~~~~wd------~~v~~~~~~~~~~~~~ 85 (357)
T 4g56_B 17 NLYFQSNGSSKGSAWGRPVTAP-----ACMEVQIGAVRYRRDGALLLAASSLSSRTWG------GSIWVFKDPEGAPNES 85 (357)
T ss_dssp ----------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCC------EEEEEESSCC---CGG
T ss_pred ceEEecCCCccccccCCCCCCc-----ccccCCEEEEEECCCCCEEEEEcCCCCcccc------CeEEEEECCCCCccee
Confidence 4556667788889999875543 2488899999999999999998854321 3 5788999888876554
Q ss_pred cceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEE----E--cCCcEEEEEEcCC-ceEEEEecCCCC
Q 011970 177 FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS----I--SDKHVQEIKISPG-IMLLIFNRSSSH 249 (474)
Q Consensus 177 ~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~t----l--~~~~V~~vafSpg-~~la~~s~~s~D 249 (474)
......++...+..|+|+ |+|++|+ ++.|++|||||+.+++++.. . +...|.+|+|+|+ .+|+++ +.|
T Consensus 86 ~~~~~~~~~~~V~~~~~s-~d~~~l~-~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sg---s~d 160 (357)
T 4g56_B 86 LCTAGVQTEAGVTDVAWV-SEKGILV-ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSG---GKD 160 (357)
T ss_dssp GCSEEEECSSCEEEEEEE-TTTEEEE-EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEE---ETT
T ss_pred EecccCCCCCCEEEEEEc-CCCCEEE-EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEE---eCC
Confidence 332222344567799999 6887665 67799999999999886532 2 2468999999985 556655 458
Q ss_pred ccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEec--cccCCceEEEEEcCC-Cc
Q 011970 250 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS--RTEFMTPSAFIFLYE-NQ 326 (474)
Q Consensus 250 ~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l--~~h~~~v~sv~Fspd-g~ 326 (474)
++|+|||+++|+++.+|++|...+.+|+|++..+..+++++.|++|+|||+++++++..+ ..|...+.+++|+|+ ++
T Consensus 161 g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 240 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD 240 (357)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT
T ss_pred CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc
Confidence 999999999999999999999999999998543456778899999999999999987654 457778999999997 57
Q ss_pred EEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCC-CEEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 327 LFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ-DLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 327 llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg-~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
+|++++ |++|+|||++ +++++++.+|... |++++|+||| ++|||++. |++|+|||+.+|++
T Consensus 241 ~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~-----v~~l~~sp~~~~~lasgs~-----------D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 241 TFACGDETGNVSLVNIKNPDSAQTSAVHSQN-----ITGLAYSYHSSPFLASISE-----------DCTVAVLDADFSEV 304 (357)
T ss_dssp EEEEEESSSCEEEEESSCGGGCEEECCCSSC-----EEEEEECSSSSCCEEEEET-----------TSCEEEECTTSCEE
T ss_pred eEEEeecccceeEEECCCCcEeEEEecccee-----EEEEEEcCCCCCEEEEEeC-----------CCEEEEEECCCCcE
Confidence 899998 9999999995 9999999999987 7999999998 68999886 99999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcC-CCCEEEEEcCCCcEEEccC
Q 011970 404 LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE-ERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 404 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSp-Dg~~LaSgs~DgtVklWd~ 474 (474)
++++ +|++ .|++|+||| |+++|||||.||+|++|+.
T Consensus 305 ~~~~-~H~~----------------------------------~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 305 FRDL-SHRD----------------------------------FVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp EEEC-CCSS----------------------------------CEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred eEEC-CCCC----------------------------------CEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 9876 8986 899999999 8999999999999999984
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.6e-48 Score=390.96 Aligned_cols=288 Identities=11% Similarity=0.170 Sum_probs=250.0
Q ss_pred ceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCC
Q 011970 119 RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNG 198 (474)
Q Consensus 119 ~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nG 198 (474)
+...+|.| |.+.|++++|+|||+.|+|+| .| .+++|||..+++.... +. .+..++..++|+ |+|
T Consensus 55 ~~~~~l~g-H~~~V~~~~~s~d~~~l~s~s----~D------g~v~vWd~~~~~~~~~---~~-~~~~~v~~~~~s-p~g 118 (354)
T 2pbi_B 55 KTRRTLKG-HGNKVLCMDWCKDKRRIVSSS----QD------GKVIVWDSFTTNKEHA---VT-MPCTWVMACAYA-PSG 118 (354)
T ss_dssp CEEEEEEC-CSSCEEEEEECTTSSEEEEEE----TT------SEEEEEETTTCCEEEE---EE-CSSSCCCEEEEC-TTS
T ss_pred EEEEEecC-CCCeEEEEEECCCCCEEEEEe----CC------CeEEEEECCCCCcceE---Ee-cCCCCEEEEEEC-CCC
Confidence 45668887 889999999999999999976 55 6999999988886332 22 234577899998 799
Q ss_pred eEEEEecCCCcEEEeecCCC------eEEE--EEcCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEeec
Q 011970 199 KVLTYSAQDSIYKVFDLKNY------TMLY--SISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL 269 (474)
Q Consensus 199 k~LaS~s~D~tiKlWdl~tg------~~l~--tl~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h 269 (474)
++||+++.|+++++|++... .... ..+...|..++|+| +..|+++ +.|++|+|||+++|+++++|.+|
T Consensus 119 ~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~---s~D~~v~lwd~~~~~~~~~~~~h 195 (354)
T 2pbi_B 119 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA---SGDGTCALWDVESGQLLQSFHGH 195 (354)
T ss_dssp SEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEE---ETTSEEEEEETTTCCEEEEEECC
T ss_pred CEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEE---eCCCcEEEEeCCCCeEEEEEcCC
Confidence 99999999999999998643 1223 34567899999998 4566665 45899999999999999999999
Q ss_pred CcceeEEEEEec-CCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEE
Q 011970 270 LHRNKKVDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELV 346 (474)
Q Consensus 270 ~~~v~~V~F~~~-~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll 346 (474)
...+..++|.+. ++..+++++.|++|++||++++++++++.+|...|.+++|+|++++|+|++ |++|+|||++ ++++
T Consensus 196 ~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 196 GADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp SSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 999999999753 356788899999999999999999999999999999999999999999999 9999999996 8888
Q ss_pred EEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCC
Q 011970 347 TSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTG 426 (474)
Q Consensus 347 ~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~ 426 (474)
..+..+... ..+.+++|+|||++|++++. |++|+|||+.+|+++.++.+|..
T Consensus 276 ~~~~~~~~~---~~~~~~~~s~~g~~l~~g~~-----------d~~i~vwd~~~~~~~~~l~~h~~-------------- 327 (354)
T 2pbi_B 276 AIYSKESII---FGASSVDFSLSGRLLFAGYN-----------DYTINVWDVLKGSRVSILFGHEN-------------- 327 (354)
T ss_dssp EEECCTTCC---SCEEEEEECTTSSEEEEEET-----------TSCEEEEETTTCSEEEEECCCSS--------------
T ss_pred EEEcCCCcc---cceeEEEEeCCCCEEEEEEC-----------CCcEEEEECCCCceEEEEECCCC--------------
Confidence 888765432 13789999999999999987 99999999999999999999986
Q ss_pred ccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 427 KSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
.|++|+|||||+.||||+.|++|+||+
T Consensus 328 --------------------~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 328 --------------------RVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp --------------------CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred --------------------cEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 899999999999999999999999996
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5e-49 Score=396.54 Aligned_cols=299 Identities=12% Similarity=0.113 Sum_probs=230.2
Q ss_pred eEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccC--CCCCccceeeecccc
Q 011970 109 VCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG--KPDSGFALFESESLK 186 (474)
Q Consensus 109 tiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G--~~~~~~~lf~~~~~~ 186 (474)
..|.|++..+... .++..|.+++|||||+.|+++| ++ ++++|...+|..... ....+......++..
T Consensus 15 ~~r~w~~~~~~~~-----~~~~~v~~~~fs~dG~~l~~~s----d~--~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (344)
T 4gqb_B 15 AAREWNLPPNAPA-----CMERQLEAARYRSDGALLLGAS----SL--SGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEA 83 (344)
T ss_dssp --------CCSCS-----SCCSEEEEEEECTTSCEEEEEE----CC--SSSCCCEEEEEESSGGGTTCGGGCSEEEEESS
T ss_pred cccccCCCCCCcc-----cccCCEEEEEECCCCCEEEEEe----CC--ceEEeeceeeeeccccccCCcceeeeeeccCC
Confidence 3577887755432 2556799999999999998865 33 455565555544221 111111111112234
Q ss_pred CceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE------cCCcEEEEEEcCC-ceEEEEecCCCCccEEEEecCC
Q 011970 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI------SDKHVQEIKISPG-IMLLIFNRSSSHVPLKILSIED 259 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl------~~~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~t 259 (474)
.+..|+|+ ||+ .|++|+.|++|||||+.+++++.++ |.+.|.+|+|||+ .+|+++ +.|++|+|||+++
T Consensus 84 ~v~~~~~s-~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sg---s~d~~i~iwd~~~ 158 (344)
T 4gqb_B 84 GVADLTWV-GER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSG---SKDICIKVWDLAQ 158 (344)
T ss_dssp CEEEEEEE-TTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEE---ETTSCEEEEETTT
T ss_pred CEEEEEEe-CCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEE---eCCCeEEEEECCC
Confidence 56789999 677 5778999999999999999865433 3468999999985 555554 5589999999999
Q ss_pred CeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecc--ccCCceEEEEEcC-CCcEEEEEc-CCc
Q 011970 260 GTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR--TEFMTPSAFIFLY-ENQLFLTFR-NRT 335 (474)
Q Consensus 260 G~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~--~h~~~v~sv~Fsp-dg~llaS~s-D~t 335 (474)
|+++++|.+|...|..++|++.....+++++.|++|+|||+++++++..+. .|...+.+++|+| ++++|++++ |++
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~ 238 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT 238 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc
Confidence 999999999999999999985433466778999999999999999988764 4666899999998 577899998 999
Q ss_pred EEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCC-CEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCC
Q 011970 336 VAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ-DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCS 413 (474)
Q Consensus 336 IklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg-~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~ 413 (474)
|+|||++ |+++.+|++|... |++|+|+||| ++|||||. |++|+|||+.+|+++ ++.+|++
T Consensus 239 v~~wd~~~~~~~~~~~~h~~~-----v~~v~fsp~g~~~lasgs~-----------D~~i~vwd~~~~~~~-~~~~H~~- 300 (344)
T 4gqb_B 239 VSLVDTKSTSCVLSSAVHSQC-----VTGLVFSPHSVPFLASLSE-----------DCSLAVLDSSLSELF-RSQAHRD- 300 (344)
T ss_dssp EEEEESCC--CCEEEECCSSC-----EEEEEECSSSSCCEEEEET-----------TSCEEEECTTCCEEE-EECCCSS-
T ss_pred EEEEECCCCcEEEEEcCCCCC-----EEEEEEccCCCeEEEEEeC-----------CCeEEEEECCCCcEE-EEcCCCC-
Confidence 9999995 9999999999987 7999999998 68999987 999999999999876 5789986
Q ss_pred CCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCC-EEEEEcCCCcEEEccC
Q 011970 414 PKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN-EIYTGNRHGLVHVWSN 474 (474)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~-~LaSgs~DgtVklWd~ 474 (474)
.|++|+|||||+ .|+|||.|++|++|+.
T Consensus 301 ---------------------------------~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 301 ---------------------------------FVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp ---------------------------------CEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred ---------------------------------CEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 899999999997 5789999999999974
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.6e-50 Score=403.04 Aligned_cols=304 Identities=12% Similarity=0.153 Sum_probs=259.0
Q ss_pred CCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeecccc
Q 011970 107 SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLK 186 (474)
Q Consensus 107 dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~ 186 (474)
+.++..|+..+.++.++|.| |.+.|++|+|+|+|+.|+|+| .| ++++|||+.+++.... +. .|..
T Consensus 45 ~~~~~~~~~~~~~~~~~l~g-H~~~V~~~~~sp~~~~l~s~s----~D------~~v~iWd~~~~~~~~~---~~-~h~~ 109 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQG-HSGKVYSLDWTPEKNWIVSAS----QD------GRLIVWNALTSQKTHA---IK-LHCP 109 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECC-CSSCEEEEEECTTSSCEEEEE----TT------SEEEEEETTTTEEEEE---EE-CCCT
T ss_pred cccccccccceeEEeecccc-cccEEEEEEEcCCCCEEEEEe----CC------CeEEEEECCCCccceE---Ee-cCCC
Confidence 34555688788889999997 889999999999999999976 55 6999999988886432 22 2456
Q ss_pred CceEEEEeCCCCeEEEEecCCCcEEEeecCCCe-------EEEEE--cCCcEEEEEEcC--CceEEEEecCCCCccEEEE
Q 011970 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-------MLYSI--SDKHVQEIKISP--GIMLLIFNRSSSHVPLKIL 255 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~-------~l~tl--~~~~V~~vafSp--g~~la~~s~~s~D~tIkLW 255 (474)
++..++|+ |||++||+|+.|++|+|||+.+.. +..++ +...|.+++|+| +..|+++ +.|++|+||
T Consensus 110 ~v~~~~~s-~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~---s~D~~i~~w 185 (380)
T 3iz6_a 110 WVMECAFA-PNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITG---SGDQTCVLW 185 (380)
T ss_dssp TCCCCEEC-TTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEE---CTTSCEEEE
T ss_pred CEEEEEEC-CCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEE---CCCCcEEEE
Confidence 77799998 799999999999999999987532 22333 346799999997 3457765 568999999
Q ss_pred ecCCCeEEEEE-----eecCcceeEEEEEecCCCeEEEEeCCCcEEEEECC-CCceEEeccccCCceEEEEEcCCCcEEE
Q 011970 256 SIEDGTVLKVF-----YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR-NAELMEVSRTEFMTPSAFIFLYENQLFL 329 (474)
Q Consensus 256 di~tG~~L~tl-----~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~-tg~~~~~l~~h~~~v~sv~Fspdg~lla 329 (474)
|+++|+++.++ .+|...+.+++|.++++..+++++.|++|+|||++ ++++++++.+|...|.+++|+|+|++|+
T Consensus 186 d~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 265 (380)
T 3iz6_a 186 DVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG 265 (380)
T ss_dssp CTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE
T ss_pred EcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE
Confidence 99999999998 57888999999987778888889999999999998 5688899999999999999999999999
Q ss_pred EEc-CCcEEEEeCC-CcEEEEeccCCCCcC--CCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEE
Q 011970 330 TFR-NRTVAVWNFR-GELVTSFEDHLLWHP--DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLA 405 (474)
Q Consensus 330 S~s-D~tIklWd~~-G~ll~tl~gH~~~~~--~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~ 405 (474)
|++ |++|+|||++ |++++++..|..... ...|.+++|+|+|++|++|+. ||+|+|||+.+++++.
T Consensus 266 s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-----------dg~i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS-----------NGDCYVWDTLLAEMVL 334 (380)
T ss_dssp EECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-----------TSCEEEEETTTCCEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC-----------CCCEEEEECCCCceEE
Confidence 999 9999999995 999999987643210 123689999999999999876 9999999999999999
Q ss_pred Ee----cCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 406 KI----NATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 406 tl----~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
++ .+|.. .|++|+|||||+.|||||.|++|+||+.
T Consensus 335 ~~~~~~~~h~~----------------------------------~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 335 NLGTLQNSHEG----------------------------------RISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp EECCSCSSCCC----------------------------------CCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred EEecccCCCCC----------------------------------ceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 98 67775 8999999999999999999999999984
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.4e-48 Score=379.95 Aligned_cols=285 Identities=12% Similarity=0.097 Sum_probs=244.7
Q ss_pred ceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCC
Q 011970 119 RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNG 198 (474)
Q Consensus 119 ~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nG 198 (474)
+..++|.+ |.+.|.+|+|+|||+.|++++ .| .+++||++.++++... +. .+...+..++|+ |+|
T Consensus 4 ~~~~~~~~-h~~~V~~~~fsp~~~~l~s~~----~d------g~v~lWd~~~~~~~~~---~~-~~~~~v~~~~~~-~~~ 67 (304)
T 2ynn_A 4 DIKKTFSN-RSDRVKGIDFHPTEPWVLTTL----YS------GRVELWNYETQVEVRS---IQ-VTETPVRAGKFI-ARK 67 (304)
T ss_dssp CCEEEEEE-ECSCEEEEEECSSSSEEEEEE----TT------SEEEEEETTTTEEEEE---EE-CCSSCEEEEEEE-GGG
T ss_pred eeEEeecC-CCCceEEEEECCCCCEEEEEc----CC------CcEEEEECCCCceeEE---ee-ccCCcEEEEEEe-CCC
Confidence 34567887 778899999999999999976 55 6999999998876432 22 133456789998 799
Q ss_pred eEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCC-eEEEEEeecCccee
Q 011970 199 KVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDG-TVLKVFYHLLHRNK 274 (474)
Q Consensus 199 k~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG-~~L~tl~~h~~~v~ 274 (474)
++|++|+.|++|+|||+++++++.++. .+.|.+|+|+|+ .+|+++ +.|++|+|||++++ .+.+++.+|.+.|.
T Consensus 68 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg---s~D~~v~lWd~~~~~~~~~~~~~h~~~v~ 144 (304)
T 2ynn_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSG---SDDLTVKLWNWENNWALEQTFEGHEHFVM 144 (304)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEE---ETTSCEEEEEGGGTTEEEEEECCCCSCEE
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEE---CCCCeEEEEECCCCcchhhhhcccCCcEE
Confidence 999999999999999999999998886 467999999985 555554 55899999999988 56688999999999
Q ss_pred EEEEEecCCCeEEEEeCCCcEEEEECCCCceEEec-cccCCceEEEEEcC--CCcEEEEEc-CCcEEEEeCC-CcEEEEe
Q 011970 275 KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-RTEFMTPSAFIFLY--ENQLFLTFR-NRTVAVWNFR-GELVTSF 349 (474)
Q Consensus 275 ~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l-~~h~~~v~sv~Fsp--dg~llaS~s-D~tIklWd~~-G~ll~tl 349 (474)
+++|+|.++..|++++.|++|+|||++++++...+ .+|...+..+.|+| ++++|+|++ |++|+|||++ ++++.+|
T Consensus 145 ~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~ 224 (304)
T 2ynn_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL 224 (304)
T ss_dssp EEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceee
Confidence 99998656778888999999999999988876554 46767889999975 889999999 9999999995 9999999
Q ss_pred ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccc
Q 011970 350 EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSK 429 (474)
Q Consensus 350 ~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~ 429 (474)
++|... |..++|+|++++|||++. ||+|+|||+.++++++++.+|..
T Consensus 225 ~~h~~~-----v~~~~~~p~~~~l~s~s~-----------Dg~i~iWd~~~~~~~~~~~~~~~----------------- 271 (304)
T 2ynn_A 225 EGHMSN-----VSFAVFHPTLPIIISGSE-----------DGTLKIWNSSTYKVEKTLNVGLE----------------- 271 (304)
T ss_dssp ECCSSC-----EEEEEECSSSSEEEEEET-----------TSCEEEEETTTCCEEEEECCSSS-----------------
T ss_pred CCCCCC-----EEEEEECCCCCEEEEEcC-----------CCeEEEEECCCCceeeeccCCCc-----------------
Confidence 999987 789999999999999987 99999999999999999999975
Q ss_pred cccccccccccccccccCEEEEEEcCCCC--EEEEEcCCCcEEEcc
Q 011970 430 KLNKSSYIRSTVGEALEDITSLFYDEERN--EIYTGNRHGLVHVWS 473 (474)
Q Consensus 430 ~~~~~~~~~~~~~~~l~~V~slafSpDg~--~LaSgs~DgtVklWd 473 (474)
.|++++|+|+|. .||+|+.||.+ +|+
T Consensus 272 -----------------~~~~~~~~~~~~~~~~asg~~~g~~-~~~ 299 (304)
T 2ynn_A 272 -----------------RSWCIATHPTGRKNYIASGFDNGFT-VLS 299 (304)
T ss_dssp -----------------SEEEEEECTTCGGGCEEEEETTEEE-EEE
T ss_pred -----------------cEEEEEECCCCCceEEEEecCCceE-EEE
Confidence 899999999986 58999888754 553
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.4e-47 Score=374.13 Aligned_cols=296 Identities=10% Similarity=0.124 Sum_probs=246.0
Q ss_pred ceeeEeecCCCceEEEEEEeeCC-CEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeee-ccccCceEEEEeCC
Q 011970 119 RRICFLNVSPDEVIRSLFYNKNN-DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES-ESLKWPGFVEFDDV 196 (474)
Q Consensus 119 ~~l~~l~g~~~~~i~sv~fspdg-~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~~ 196 (474)
++..+|.| |.+.|.+|+|+|++ ++|+|+| .| +++++|++...+...+.++... +|...+..++|+ |
T Consensus 8 ~l~~~l~g-H~~~V~~l~~~~~~~~~l~s~s----~D------~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s-~ 75 (319)
T 3frx_A 8 VLRGTLEG-HNGWVTSLATSAGQPNLLLSAS----RD------KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLT-A 75 (319)
T ss_dssp EEEEEECC-CSSCEEEEEECSSCTTEEEEEE----TT------SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEEC-T
T ss_pred EEEEEEcc-ccceEEEEEccCCCccEEEEec----CC------ccEEEecCCCCCccccccceEEeCCcccEEEEEEC-C
Confidence 44568887 88999999999976 7899976 55 6999999865443222222221 356677789998 7
Q ss_pred CCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEEEEeecCcce
Q 011970 197 NGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN 273 (474)
Q Consensus 197 nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v 273 (474)
||++|++|+.|++|||||+.+++++.++. ...|.+++|+|+ .+++++ +.|++|+|||++ ++++.++.+|...+
T Consensus 76 dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~---s~D~~i~vwd~~-~~~~~~~~~h~~~v 151 (319)
T 3frx_A 76 DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISG---SRDKTIKVWTIK-GQCLATLLGHNDWV 151 (319)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEE---ETTSCEEEEETT-SCEEEEECCCSSCE
T ss_pred CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEE---eCCCeEEEEECC-CCeEEEEeccCCcE
Confidence 99999999999999999999999998886 468999999984 556655 558999999985 68999999999999
Q ss_pred eEEEEEec-----CCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEE
Q 011970 274 KKVDFIEQ-----FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELV 346 (474)
Q Consensus 274 ~~V~F~~~-----~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll 346 (474)
..+.|.+. ++..+++++.|++|++||++++++...+.+|...|.+++|+|+|++|+|++ |++|+|||+. ++++
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 99999752 234788889999999999999999999999999999999999999999999 9999999995 9999
Q ss_pred EEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCC
Q 011970 347 TSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTG 426 (474)
Q Consensus 347 ~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~ 426 (474)
.++..|.. |.+++|+|||++|++++ ++.|++|++.++.++..+..+... .
T Consensus 232 ~~~~~~~~------v~~~~~sp~~~~la~~~------------~~~i~v~~~~~~~~~~~~~~~~~~-~----------- 281 (319)
T 3frx_A 232 YTLSAQDE------VFSLAFSPNRYWLAAAT------------ATGIKVFSLDPQYLVDDLRPEFAG-Y----------- 281 (319)
T ss_dssp EEEECCSC------EEEEEECSSSSEEEEEE------------TTEEEEEEETTEEEEEEECCCCTT-C-----------
T ss_pred EEecCCCc------EEEEEEcCCCCEEEEEc------------CCCcEEEEeCcCeeeeccCccccc-c-----------
Confidence 99987643 78999999999999876 567999999999999988765420 0
Q ss_pred ccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 427 KSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
...+-..|.+|+|||||++|+||+.||+|+|||.
T Consensus 282 --------------~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 282 --------------SKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp --------------CGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred --------------ccCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 0001127899999999999999999999999984
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-47 Score=380.57 Aligned_cols=292 Identities=13% Similarity=0.145 Sum_probs=242.4
Q ss_pred ccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCC
Q 011970 117 TNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV 196 (474)
Q Consensus 117 tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~ 196 (474)
.-+++.+|.+++...|++|+|||||+.||++| .| ++++||++..++.... ..+..+|...+..|+|+ |
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~----~D------~~i~iw~~~~~~~~~~-~~~~~~h~~~v~~~~~s-p 71 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCG----GD------RRIRIWGTEGDSWICK-SVLSEGHQRTVRKVAWS-P 71 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEE----TT------SCEEEEEEETTEEEEE-EEECSSCSSCEEEEEEC-T
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEc----CC------CeEEEEEcCCCcceee-eeeccccCCcEEEEEEC-C
Confidence 34678899985544899999999999999976 55 6999999987764211 11222356678899998 7
Q ss_pred CCeEEEEecCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCC---eEEEEEee
Q 011970 197 NGKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG---TVLKVFYH 268 (474)
Q Consensus 197 nGk~LaS~s~D~tiKlWdl~tg~--~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG---~~L~tl~~ 268 (474)
||++||+|+.|++|+|||+.++. ++.++. ...|.+|+|+| +.+||++ +.|++|+|||+.++ +++.++.+
T Consensus 72 ~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~---s~D~~v~iwd~~~~~~~~~~~~~~~ 148 (345)
T 3fm0_A 72 CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATC---SRDKSVWVWEVDEEDEYECVSVLNS 148 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEEECTTSCEEEEEEECC
T ss_pred CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEE---ECCCeEEEEECCCCCCeEEEEEecC
Confidence 99999999999999999998774 677776 46899999998 5556655 45899999999877 56788899
Q ss_pred cCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCc--eEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeC-C--
Q 011970 269 LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAE--LMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF-R-- 342 (474)
Q Consensus 269 h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~--~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~-~-- 342 (474)
|...+..++|+ |++..|++++.|++|+|||+++++ +..++.+|...|++++|+|+|++|+|++ |++|+|||. .
T Consensus 149 h~~~v~~~~~~-p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 149 HTQDVKHVVWH-PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp CCSCEEEEEEC-SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTT
T ss_pred cCCCeEEEEEC-CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCC
Confidence 99999999998 678889999999999999999886 5578899999999999999999999999 999999995 1
Q ss_pred -------------CcEEEEecc-CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe------
Q 011970 343 -------------GELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK------ 402 (474)
Q Consensus 343 -------------G~ll~tl~g-H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~------ 402 (474)
++|+.++.+ |... |++++|+|++.+||++|. |++|+||++.++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~~~-----------d~~i~vw~~~~~~~~~~~~ 291 (345)
T 3fm0_A 228 NEQGVACSGSDPSWKCICTLSGFHSRT-----IYDIAWCQLTGALATACG-----------DDAIRVFQEDPNSDPQQPT 291 (345)
T ss_dssp CTTCCCCC---CEEEEEEEECSSCSSC-----EEEEEECTTTCCEEEEET-----------TSCEEEEEECTTSCTTSCC
T ss_pred CCccceeeccCCccceeEEecCCCCCc-----EEEEEEecCCCEEEEEeC-----------CCeEEEEEeCCCCCcceee
Confidence 256778887 6655 799999999999999987 9999999987653
Q ss_pred ---EEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCC-CEEEEEcCCCcEEEccC
Q 011970 403 ---CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEER-NEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 403 ---cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg-~~LaSgs~DgtVklWd~ 474 (474)
....+.+|.. .|++|+|+|++ ..|||||.||+|+||+.
T Consensus 292 ~~~~~~~~~~h~~----------------------------------~V~~v~~~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 292 FSLTAHLHQAHSQ----------------------------------DVNCVAWNPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp EEEEEEETTSSSS----------------------------------CEEEEEECSSSTTEEEEEETTSCEEEEEE
T ss_pred EEEEeeecccccC----------------------------------cEeEeEEeCCCceEEEEcCCCCcEEEEEe
Confidence 1233467774 89999999998 49999999999999973
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-47 Score=392.07 Aligned_cols=278 Identities=10% Similarity=0.145 Sum_probs=248.6
Q ss_pred cccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEE
Q 011970 86 MKRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 163 (474)
Q Consensus 86 ~~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~ 163 (474)
.|+.+|..+.|+ +.+||+++.||+|++||..+|++++++.+ |.+.|.+|+|+|+|+.|+++| .| .++
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~sgs----~D------~~i 174 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLASCS----AD------MTI 174 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSSEEEEEE----TT------SCC
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCCEEEEEe----CC------CeE
Confidence 388999999999 89999999999999999999999999997 778999999999999999976 45 588
Q ss_pred EEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCc-eE
Q 011970 164 KIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGI-ML 240 (474)
Q Consensus 164 ~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~-~l 240 (474)
+|||+..+++...+ . +|...+.+|+|+ |+|++|++|+.|++|++||+.+++++.++. ...|..++|+|++ .+
T Consensus 175 ~iwd~~~~~~~~~~--~--~h~~~V~~v~~~-p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 175 KLWDFQGFECIRTM--H--GHDHNVSSVSIM-PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249 (410)
T ss_dssp CEEETTSSCEEECC--C--CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred EEEeCCCCceeEEE--c--CCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEE
Confidence 99999888874422 1 234567799998 799999999999999999999999999886 4589999999855 55
Q ss_pred EEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecC-------------------CCeEEEEeCCCcEEEEECC
Q 011970 241 LIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQF-------------------NEKLLVKQENENLQILDVR 301 (474)
Q Consensus 241 a~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~-------------------~~~ll~~~~D~tIkIWDv~ 301 (474)
+++ +.|++|+|||+.+++++.+|.+|.+.+.+++|+|.. +..|++++.|++|+|||++
T Consensus 250 ~s~---s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~ 326 (410)
T 1vyh_C 250 ASC---SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326 (410)
T ss_dssp EEE---ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred EEE---cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence 554 458999999999999999999999999999998531 4578889999999999999
Q ss_pred CCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecC
Q 011970 302 NAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 379 (474)
Q Consensus 302 tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~ 379 (474)
+++++.++.+|...|.+++|+|+|++|+|++ |++|+|||+. ++++.++.+|... |.+++|+|++++|||||.
T Consensus 327 ~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~l~sgs~- 400 (410)
T 1vyh_C 327 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-----VTSLDFHKTAPYVVTGSV- 400 (410)
T ss_dssp TTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSC-----EEEEEECSSSSCEEEEET-
T ss_pred CCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCc-----EEEEEEcCCCCEEEEEeC-
Confidence 9999999999999999999999999999999 9999999995 9999999999987 799999999999999987
Q ss_pred CCccccccCCCCeEEEEeC
Q 011970 380 EPEDQWMEGSAGSINVSSI 398 (474)
Q Consensus 380 ~~~~~~~~s~DgtIklWdi 398 (474)
|++|+|||+
T Consensus 401 ----------D~~i~vW~~ 409 (410)
T 1vyh_C 401 ----------DQTVKVWEC 409 (410)
T ss_dssp ----------TSEEEEEC-
T ss_pred ----------CCcEEEEeC
Confidence 999999985
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.2e-47 Score=383.96 Aligned_cols=285 Identities=16% Similarity=0.230 Sum_probs=243.4
Q ss_pred eeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeee--------------cccc
Q 011970 121 ICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES--------------ESLK 186 (474)
Q Consensus 121 l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~--------------~~~~ 186 (474)
+.++. |...|.+++|||||++||+++ + .+++||++.+|++...+..... .+-.
T Consensus 58 ~~~~~--h~~~V~~v~fspdg~~la~g~----~-------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 124 (393)
T 1erj_A 58 HKSLD--HTSVVCCVKFSNDGEYLATGC----N-------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDL 124 (393)
T ss_dssp EEEEE--CSSCCCEEEECTTSSEEEEEC----B-------SCEEEEETTTCCEEEEECC-----------------CCCC
T ss_pred EEecC--CCCEEEEEEECCCCCEEEEEc----C-------CcEEEEEecCCCEEEEecCccccccccccccccccCCCce
Confidence 34453 778999999999999999843 3 4789999999886332111100 0112
Q ss_pred CceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEE
Q 011970 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVL 263 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L 263 (474)
++.+|+|+ |||++||+|+.|++|+|||+.+++++.++. ...|.+++|+| +..|+++ +.|++|+|||+++|+++
T Consensus 125 ~v~~v~~s-~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~---s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 125 YIRSVCFS-PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG---SGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp BEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEETTTTEEE
T ss_pred eEEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEe---cCCCcEEEEECCCCeeE
Confidence 46789998 799999999999999999999999998886 45799999998 5566655 55899999999999999
Q ss_pred EEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEec-------cccCCceEEEEEcCCCcEEEEEc-CCc
Q 011970 264 KVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-------RTEFMTPSAFIFLYENQLFLTFR-NRT 335 (474)
Q Consensus 264 ~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l-------~~h~~~v~sv~Fspdg~llaS~s-D~t 335 (474)
.++.++ ..+..++|++.++..+++++.|++|+|||++++++++.+ .+|...|.+++|+|+|++|++++ |++
T Consensus 201 ~~~~~~-~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEECS-SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEcC-CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 998754 678999998667888888999999999999999988776 67999999999999999999999 999
Q ss_pred EEEEeCC-------------CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe
Q 011970 336 VAVWNFR-------------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 402 (474)
Q Consensus 336 IklWd~~-------------G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~ 402 (474)
|+|||++ +.|..++.+|..+ |.+++|+|+|++|+||+. |++|+|||+.+|+
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~sgs~-----------D~~v~iwd~~~~~ 343 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF-----VLSVATTQNDEYILSGSK-----------DRGVLFWDKKSGN 343 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSC-----EEEEEECGGGCEEEEEET-----------TSEEEEEETTTCC
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCc-----EEEEEECCCCCEEEEEeC-----------CCeEEEEECCCCe
Confidence 9999984 4577899999987 789999999999999987 9999999999999
Q ss_pred EEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcC------CCCEEEEEcCCCcEEEcc
Q 011970 403 CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE------ERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 403 cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSp------Dg~~LaSgs~DgtVklWd 473 (474)
++.++++|.. .|++++|+| +++.||||+.||+|+||+
T Consensus 344 ~~~~l~~h~~----------------------------------~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 344 PLLMLQGHRN----------------------------------SVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp EEEEEECCSS----------------------------------CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred EEEEECCCCC----------------------------------CEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 9999999986 899999986 789999999999999997
No 17
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-47 Score=374.97 Aligned_cols=317 Identities=11% Similarity=0.071 Sum_probs=270.9
Q ss_pred cccEEEEEee--cc-EEEEeeCCCeEEeeec----cccc------eeeEeec---------CCCceEEEEEEeeCCCEEE
Q 011970 88 RTKVIEIVAA--RD-IVFALAHSGVCAAFSR----ETNR------RICFLNV---------SPDEVIRSLFYNKNNDSLI 145 (474)
Q Consensus 88 ~~~V~~i~~s--~~-~las~s~dgtiklW~~----~tg~------~l~~l~g---------~~~~~i~sv~fspdg~~Li 145 (474)
..+|..+.|+ ++ +||+++.||+|++|++ .+|+ ....+.. +|...|.+++|+|+|+.|+
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 124 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIV 124 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEE
T ss_pred cCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEE
Confidence 3445555555 77 9999999999999999 9898 5665553 1567899999999999999
Q ss_pred EEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc
Q 011970 146 TVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS 225 (474)
Q Consensus 146 s~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~ 225 (474)
+++ .| ..++||+ .+|+.... +. .+...+..++|+ |+|++|++++.|++|++||+.+++++..+.
T Consensus 125 ~~~----~d------g~i~i~~-~~~~~~~~---~~-~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 125 TGV----EN------GELRLWN-KTGALLNV---LN-FHRAPIVSVKWN-KDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp EEE----TT------SCEEEEE-TTSCEEEE---EC-CCCSCEEEEEEC-TTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred EEe----CC------CeEEEEe-CCCCeeee---cc-CCCccEEEEEEC-CCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 976 44 5899999 66765331 22 244567789998 799999999999999999999999998886
Q ss_pred C--Cc---------------EEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEE
Q 011970 226 D--KH---------------VQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV 288 (474)
Q Consensus 226 ~--~~---------------V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~ 288 (474)
. .. |.+++|+|++.++++ +.|+.|++||+++++++.++..|...+..++|+ |++..|++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~ 264 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIP---GPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN-DTNKLLLS 264 (425)
T ss_dssp CC---------------CCCBSCCEEEETTEEEEE---CGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE-TTTTEEEE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCEEEEE---cCCCeEEEEEcCCCceeeeeccCCCceEEEEEC-CCCCEEEE
Confidence 3 23 889999998888876 457999999999999999999999999999998 56788888
Q ss_pred EeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEE
Q 011970 289 KQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYI 366 (474)
Q Consensus 289 ~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svaf 366 (474)
++.|++|+|||+++++++..+.+|...+.+++|+|++ +|++++ |++|++||++ ++++..+.+|... |.+++|
T Consensus 265 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----i~~~~~ 338 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-----IFAGRI 338 (425)
T ss_dssp EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-----EEEEEE
T ss_pred EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-----EEEEEE
Confidence 9999999999999999999999999999999999999 888888 9999999995 9999999999876 789999
Q ss_pred CCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe--------------------EEEEecCCCCCCCCccccCCCCCC
Q 011970 367 TSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK--------------------CLAKINATNCSPKVDDELGSSSTG 426 (474)
Q Consensus 367 SpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~--------------------cl~tl~gH~~~~~~~~~~~~~~~~ 426 (474)
+|||++||+++. ||+|+|||+.+++ ++.++.+|..
T Consensus 339 s~~~~~l~~~~~-----------dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 393 (425)
T 1r5m_A 339 SQDGQKYAVAFM-----------DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD-------------- 393 (425)
T ss_dssp CTTSSEEEEEET-----------TSCEEEEECHHHHC--------------CEECCEEEEECCTTC--------------
T ss_pred cCCCCEEEEEEC-----------CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc--------------
Confidence 999999999986 9999999999999 8999999853
Q ss_pred cccccccccccccccccccc-CEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 427 KSKKLNKSSYIRSTVGEALE-DITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~l~-~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
. .|++++|+|||+.||+|+.||+|++|+.
T Consensus 394 -------------------~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 394 -------------------NDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp -------------------CCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred -------------------CCceEEEEccCCCceEEEEecCceEEEEee
Confidence 1 6999999999999999999999999985
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-46 Score=372.62 Aligned_cols=276 Identities=14% Similarity=0.153 Sum_probs=242.4
Q ss_pred ccccEEEEEee------ccEEEEeeCCCeEEeeeccccce--eeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccce
Q 011970 87 KRTKVIEIVAA------RDIVFALAHSGVCAAFSRETNRR--ICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSL 158 (474)
Q Consensus 87 ~~~~V~~i~~s------~~~las~s~dgtiklW~~~tg~~--l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~L 158 (474)
|...|.+|.|+ +++||+++.|++||+|+..+++. ..++.| |...|.+++|+|++..|+++| .|
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~g-h~~~v~~~~~~~~~~~l~s~s----~D---- 101 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEG-HQLGVVSVDISHTLPIAASSS----LD---- 101 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECSSSSEEEEEE----TT----
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeecc-CCCCEEEEEECCCCCEEEEEe----CC----
Confidence 66777777775 46899999999999999987764 446776 788999999999999999976 55
Q ss_pred eeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC
Q 011970 159 KCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP 236 (474)
Q Consensus 159 k~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp 236 (474)
++++|||+.+|++... +.. +...+..++|+ |||++|++++.|++|++||++++++.+++. ...|.+++|+|
T Consensus 102 --~~i~lWd~~~~~~~~~---~~~-~~~~~~~~~~s-pdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 102 --AHIRLWDLENGKQIKS---IDA-GPVDAWTLAFS-PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 174 (321)
T ss_dssp --SEEEEEETTTTEEEEE---EEC-CTTCCCCEEEC-TTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT
T ss_pred --CcEEEEECCCCCEEEE---EeC-CCccEEEEEEC-CCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC
Confidence 6999999999986432 222 23345589998 799999999999999999999999988886 46799999998
Q ss_pred C-ceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCc
Q 011970 237 G-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMT 315 (474)
Q Consensus 237 g-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~ 315 (474)
+ .+||++ +.|++|+|||+++|+++.++++|...+.+++|+ |++..|++++.|++|+|||+++++++.++.+|...
T Consensus 175 dg~~lasg---~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~ 250 (321)
T 3ow8_A 175 DGKYLASG---AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW 250 (321)
T ss_dssp TSSEEEEE---ETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC-TTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCCEEEEE---cCCCeEEEEECCCCcEEEEEcccCCceeEEEEc-CCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCc
Confidence 4 555554 458999999999999999999999999999998 67888888999999999999999999999999999
Q ss_pred eEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeE
Q 011970 316 PSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSI 393 (474)
Q Consensus 316 v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtI 393 (474)
|.+++|+|+|++|+|++ |++|+|||+. ++++++|.+|... |++++|+|||++|+|++. |++|
T Consensus 251 v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~-----v~~v~~s~~g~~l~s~~~-----------d~~i 314 (321)
T 3ow8_A 251 VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ-----VWGVKYNGNGSKIVSVGD-----------DQEI 314 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-----EEEEEECTTSSEEEEEET-----------TCCE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCc-----EEEEEECCCCCEEEEEeC-----------CCeE
Confidence 99999999999999999 9999999995 9999999999987 799999999999999987 9999
Q ss_pred EEEeC
Q 011970 394 NVSSI 398 (474)
Q Consensus 394 klWdi 398 (474)
+|||.
T Consensus 315 ~vwd~ 319 (321)
T 3ow8_A 315 HIYDC 319 (321)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99996
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.6e-46 Score=368.71 Aligned_cols=277 Identities=9% Similarity=0.144 Sum_probs=239.3
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
|..+|.++.|+ +++||+++.||+|++||..+++++.++.+ |...|.+++|+|+|+.|++++ .| ..++
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~----~d------~~v~ 122 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVACGG----LD------NICS 122 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSSEEEEEE----TT------CEEE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCCEEEEEe----CC------CeEE
Confidence 56677777777 88999999999999999999999999996 778899999999999999976 55 6999
Q ss_pred EeEeccCCCCCccc-eeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCc-eE
Q 011970 165 IEYIRRGKPDSGFA-LFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGI-ML 240 (474)
Q Consensus 165 iw~i~~G~~~~~~~-lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~-~l 240 (474)
||++..++...... .+. +|...+..+.|+ ++++ |++++.|++|+|||+.+++++.++. ...|.+++|+|++ .+
T Consensus 123 iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 199 (340)
T 1got_B 123 IYNLKTREGNVRVSRELA-GHTGYLSCCRFL-DDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199 (340)
T ss_dssp EEETTTCSBSCEEEEEEE-CCSSCEEEEEEE-ETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEECccCCCcceeEEEec-CCCccEEEEEEC-CCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE
Confidence 99997765321111 111 345667789998 6776 7889999999999999999999886 4579999999855 45
Q ss_pred EEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc--cCCceEE
Q 011970 241 LIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT--EFMTPSA 318 (474)
Q Consensus 241 a~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~--h~~~v~s 318 (474)
+++ +.|++|+|||+++|+++.+|.+|...+.+|+|+ |++..|++++.|++|+|||+++++++..+.. +...|.+
T Consensus 200 ~sg---~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~ 275 (340)
T 1got_B 200 VSG---ACDASAKLWDVREGMCRQTFTGHESDINAICFF-PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 275 (340)
T ss_dssp EEE---ETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred EEE---eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEE
Confidence 554 458999999999999999999999999999998 6788899999999999999999998877653 3357999
Q ss_pred EEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEE
Q 011970 319 FIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVS 396 (474)
Q Consensus 319 v~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklW 396 (474)
++|+|+|++|++++ |++|+|||+. ++++.+|.+|... |.+++|+|||++||||+. |++|+||
T Consensus 276 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~s~dg~~l~s~s~-----------D~~i~iW 339 (340)
T 1got_B 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR-----VSCLGVTDDGMAVATGSW-----------DSFLKIW 339 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC-----EEEEEECTTSSCEEEEET-----------TSCEEEE
T ss_pred EEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCc-----EEEEEEcCCCCEEEEEcC-----------CccEEec
Confidence 99999999999999 9999999994 9999999999987 799999999999999987 9999999
Q ss_pred e
Q 011970 397 S 397 (474)
Q Consensus 397 d 397 (474)
|
T Consensus 340 d 340 (340)
T 1got_B 340 N 340 (340)
T ss_dssp C
T ss_pred C
Confidence 7
No 20
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.3e-46 Score=363.38 Aligned_cols=289 Identities=13% Similarity=0.129 Sum_probs=243.9
Q ss_pred cccceeecccCCCCCcccccccccccccEEEEEeeccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCC
Q 011970 63 MHLVEEYDTHDPKGHCPFVLPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNND 142 (474)
Q Consensus 63 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~ 142 (474)
+.++..|..|..++.++.|.|+ +++||+++.||+|++||.+++++++++++ |...|+++.|+|+|+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~-------------~~~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 68 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPT-------------EPWVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKN 68 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSS-------------SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT
T ss_pred ceeEEeecCCCCceEEEEECCC-------------CCEEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCC
Confidence 4455666666665555555555 99999999999999999999999999997 778899999999999
Q ss_pred EEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCC-eEE
Q 011970 143 SLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY-TML 221 (474)
Q Consensus 143 ~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg-~~l 221 (474)
.|+++| .| .+++|||+.+|++... +. .|...+.+|+|+ |+|++|++|+.|++|||||+.++ .+.
T Consensus 69 ~l~s~s----~d------~~i~vwd~~~~~~~~~---~~-~h~~~v~~~~~~-~~~~~l~sgs~D~~v~lWd~~~~~~~~ 133 (304)
T 2ynn_A 69 WIIVGS----DD------FRIRVFNYNTGEKVVD---FE-AHPDYIRSIAVH-PTKPYVLSGSDDLTVKLWNWENNWALE 133 (304)
T ss_dssp EEEEEE----TT------SEEEEEETTTCCEEEE---EE-CCSSCEEEEEEC-SSSSEEEEEETTSCEEEEEGGGTTEEE
T ss_pred EEEEEC----CC------CEEEEEECCCCcEEEE---Ee-CCCCcEEEEEEc-CCCCEEEEECCCCeEEEEECCCCcchh
Confidence 999976 56 6999999999987432 22 255677899998 79999999999999999999987 455
Q ss_pred EEEc--CCcEEEEEEcC-C-ceEEEEecCCCCccEEEEecCCCeEEEEEe-ecCcceeEEEEEe-cCCCeEEEEeCCCcE
Q 011970 222 YSIS--DKHVQEIKISP-G-IMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIE-QFNEKLLVKQENENL 295 (474)
Q Consensus 222 ~tl~--~~~V~~vafSp-g-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~-~h~~~v~~V~F~~-~~~~~ll~~~~D~tI 295 (474)
.++. ...|.+++|+| + ..||++ +.|++|+|||+.++++..++. +|...+..++|.+ +++..|++++.|++|
T Consensus 134 ~~~~~h~~~v~~v~~~p~~~~~l~sg---s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i 210 (304)
T 2ynn_A 134 QTFEGHEHFVMCVAFNPKDPSTFASG---CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (304)
T ss_dssp EEECCCCSCEEEEEECTTCTTEEEEE---ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEE
T ss_pred hhhcccCCcEEEEEECCCCCCEEEEE---eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeE
Confidence 6665 46799999998 4 466665 558999999999988877776 5567889999975 345678889999999
Q ss_pred EEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCC--
Q 011970 296 QILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-- 371 (474)
Q Consensus 296 kIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~-- 371 (474)
+|||+++++++.++.+|...|.+++|+|++++|+|++ |++|+|||.+ ++++++|..|... +++++|+|+|.
T Consensus 211 ~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 285 (304)
T 2ynn_A 211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-----SWCIATHPTGRKN 285 (304)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSS-----EEEEEECTTCGGG
T ss_pred EEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCcc-----EEEEEECCCCCce
Confidence 9999999999999999999999999999999999999 9999999995 9999999999876 78999999985
Q ss_pred EEEEEecCCCccccccCCCCeEEEEeCCC
Q 011970 372 LIISYCKAEPEDQWMEGSAGSINVSSILT 400 (474)
Q Consensus 372 ~LaS~s~~~~~~~~~~s~DgtIklWdi~t 400 (474)
+||+|+ |..+.+|++.+
T Consensus 286 ~~asg~------------~~g~~~~~~~~ 302 (304)
T 2ynn_A 286 YIASGF------------DNGFTVLSLGN 302 (304)
T ss_dssp CEEEEE------------TTEEEEEECC-
T ss_pred EEEEec------------CCceEEEEecc
Confidence 688876 56677998754
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.5e-45 Score=355.80 Aligned_cols=290 Identities=14% Similarity=0.185 Sum_probs=249.7
Q ss_pred cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCC
Q 011970 118 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 197 (474)
Q Consensus 118 g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~n 197 (474)
.+...+|.+ |.+.|.+++|+|+|+.|++++ .| ++++||++.+|++... +. +|...+..++|+ |+
T Consensus 13 ~~~~~~~~g-h~~~v~~~~~s~~~~~l~s~~----~d------g~i~iw~~~~~~~~~~---~~-~h~~~v~~~~~~-~~ 76 (312)
T 4ery_A 13 YALKFTLAG-HTKAVSSVKFSPNGEWLASSS----AD------KLIKIWGAYDGKFEKT---IS-GHKLGISDVAWS-SD 76 (312)
T ss_dssp CEEEEEECC-CSSCEEEEEECTTSSEEEEEE----TT------SCEEEEETTTCCEEEE---EC-CCSSCEEEEEEC-TT
T ss_pred ceeEEEEcc-cCCcEEEEEECCCCCEEEEee----CC------CeEEEEeCCCcccchh---hc-cCCCceEEEEEc-CC
Confidence 345567786 788999999999999999976 45 5899999998886432 22 244567789998 79
Q ss_pred CeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEeecCccee
Q 011970 198 GKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNK 274 (474)
Q Consensus 198 Gk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~ 274 (474)
|++|++++.|++|+|||+.+++++.++. ...|..++|+| +..++++ +.|++|++||++++++++++..|...+.
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~---~~d~~i~iwd~~~~~~~~~~~~~~~~v~ 153 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG---SFDESVRIWDVKTGKCLKTLPAHSDPVS 153 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEE---ETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE---eCCCcEEEEECCCCEEEEEecCCCCcEE
Confidence 9999999999999999999999998886 46799999998 5556555 4589999999999999999999999999
Q ss_pred EEEEEecCCCeEEEEeCCCcEEEEECCCCceEEec-cccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEecc
Q 011970 275 KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFED 351 (474)
Q Consensus 275 ~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l-~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~g 351 (474)
.++|+ |++..+++++.|++|++||+++++++..+ ..|...+..++|+|++++|++++ |++|++||++ ++++.++.+
T Consensus 154 ~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 154 AVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp EEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECS
T ss_pred EEEEc-CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEe
Confidence 99997 67788888999999999999999988765 45667889999999999999999 9999999995 999999999
Q ss_pred CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccc
Q 011970 352 HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKL 431 (474)
Q Consensus 352 H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~ 431 (474)
|..... + +......+++++|++|+. ||+|+|||+.++++++++++|..
T Consensus 233 ~~~~~~-~-~~~~~~~~~~~~l~sg~~-----------dg~i~vwd~~~~~~~~~~~~h~~------------------- 280 (312)
T 4ery_A 233 HKNEKY-C-IFANFSVTGGKWIVSGSE-----------DNLVYIWNLQTKEIVQKLQGHTD------------------- 280 (312)
T ss_dssp SCCSSS-C-CCEEEECSSSCEEEECCT-----------TSCEEEEETTTCCEEEEECCCSS-------------------
T ss_pred cCCceE-E-EEEEEEeCCCcEEEEECC-----------CCEEEEEECCCchhhhhhhccCC-------------------
Confidence 987532 1 234445678999999876 99999999999999999999986
Q ss_pred cccccccccccccccCEEEEEEcCCCCEEEEEc--CCCcEEEccC
Q 011970 432 NKSSYIRSTVGEALEDITSLFYDEERNEIYTGN--RHGLVHVWSN 474 (474)
Q Consensus 432 ~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs--~DgtVklWd~ 474 (474)
.|.+++|+|+++.|+|++ .|++|++|+.
T Consensus 281 ---------------~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 281 ---------------VVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp ---------------CEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred ---------------cEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 899999999999999997 6999999973
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-46 Score=367.49 Aligned_cols=289 Identities=19% Similarity=0.178 Sum_probs=234.7
Q ss_pred ccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeec-cccCceEEEEeC
Q 011970 117 TNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESE-SLKWPGFVEFDD 195 (474)
Q Consensus 117 tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~-~~~~~~~V~Fs~ 195 (474)
+.+++++|.+ |.+.|++++|+|+ .||++| .| ++++||++..++... ...+... |...+.+|+|+
T Consensus 3 ~~~~~~~~~~-h~~~v~~~~~s~~--~las~~----~D------~~i~lw~~~~~~~~~-~~~~~~~~h~~~v~~v~~s- 67 (330)
T 2hes_X 3 SINLIKSLKL-YKEKIWSFDFSQG--ILATGS----TD------RKIKLVSVKYDDFTL-IDVLDETAHKKAIRSVAWR- 67 (330)
T ss_dssp CCEEEEEEEC-CSSCEEEEEEETT--EEEEEE----SS------SCEEEEECSSSCCEE-EEEECTTCCCSCEEEEEEC-
T ss_pred ccccceeecc-CCCceeeeccCCC--EEEEEc----CC------CEEEEEEecCCCeEE-EEEEecCCccCCEEEEEEC-
Confidence 4678889997 8899999999997 888876 55 699999998765311 1122112 55668899998
Q ss_pred CCCeEEEEecCCCcEEEeecC-------CCeEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEecC-C---Ce
Q 011970 196 VNGKVLTYSAQDSIYKVFDLK-------NYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIE-D---GT 261 (474)
Q Consensus 196 ~nGk~LaS~s~D~tiKlWdl~-------tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~-t---G~ 261 (474)
|+|++||+|+.|++|||||+. +++++.++. ...|.+|+||| |.+||++ +.|++|+|||+. . .+
T Consensus 68 p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~---s~D~~v~iwd~~~~~~~~~ 144 (330)
T 2hes_X 68 PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATC---SRDKSVWIWETDESGEEYE 144 (330)
T ss_dssp TTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEE---ETTSCEEEEECCTTCCCCE
T ss_pred CCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEE---eCCCEEEEEeccCCCCCeE
Confidence 799999999999999999984 345677775 46899999998 4556655 558999999994 2 37
Q ss_pred EEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCC--ceEEeccccCCceEEEEEcCC--CcEEEEEc-CCcE
Q 011970 262 VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNA--ELMEVSRTEFMTPSAFIFLYE--NQLFLTFR-NRTV 336 (474)
Q Consensus 262 ~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg--~~~~~l~~h~~~v~sv~Fspd--g~llaS~s-D~tI 336 (474)
++.++.+|...|..|+|+ |++..|++++.|++|+|||+.++ +++.++.+|...|++++|+|+ +.+|+|++ |++|
T Consensus 145 ~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v 223 (330)
T 2hes_X 145 CISVLQEHSQDVKHVIWH-PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTV 223 (330)
T ss_dssp EEEEECCCSSCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCE
T ss_pred EEEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeE
Confidence 889999999999999998 57888888999999999999877 788999999999999999999 78999999 9999
Q ss_pred EEEeCC-C--------cEEEEecc-CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe--EE
Q 011970 337 AVWNFR-G--------ELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK--CL 404 (474)
Q Consensus 337 klWd~~-G--------~ll~tl~g-H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~--cl 404 (474)
+|||+. + +++.++.+ |..+ |.+++|+|++ +|||++. ||+|+|||+.+|+ ++
T Consensus 224 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~v~~s~~~-~l~s~~~-----------dg~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 224 RVWKYMGDDEDDQQEWVCEAILPDVHKRQ-----VYNVAWGFNG-LIASVGA-----------DGVLAVYEEVDGEWKVF 286 (330)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCSCCSSC-----EEEEEECTTS-CEEEEET-----------TSCEEEEEEETTEEEEE
T ss_pred EEEEecCCCccccceeEEeeecccccccc-----eEEEEEcCCC-EEEEEeC-----------CCEEEEEEcCCCceEEE
Confidence 999985 4 56778876 8776 7999999776 7888876 9999999998884 44
Q ss_pred EE-ecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcC--CCCEEEEEcCCCcEEEccC
Q 011970 405 AK-INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE--ERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 405 ~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSp--Dg~~LaSgs~DgtVklWd~ 474 (474)
.+ +.+|.. ..|++|+|+| ||+.||||+.||+|+|||.
T Consensus 287 ~~~~~~h~~---------------------------------~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 287 AKRALCHGV---------------------------------YEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp EEESCTTTT---------------------------------SCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred ecccccccc---------------------------------ceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 44 367763 1699999999 7999999999999999984
No 23
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-48 Score=383.02 Aligned_cols=345 Identities=14% Similarity=0.108 Sum_probs=260.6
Q ss_pred EEEEEee--cc-EEEEe----------eCCCeEEeeeccccc---eeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCC
Q 011970 91 VIEIVAA--RD-IVFAL----------AHSGVCAAFSRETNR---RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDN 154 (474)
Q Consensus 91 V~~i~~s--~~-~las~----------s~dgtiklW~~~tg~---~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d 154 (474)
|..+.|+ ++ +||++ +.||++++|++.+++ ++..+. |...|.+++|+|+|+.|++++ .|
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~----~d 88 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQ--VDSKFNDLDWSHNNKIIAGAL----DN 88 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCC--CSSCEEEEEECSSSSCEEEEE----SS
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEe--cCCceEEEEECCCCCeEEEEc----cC
Confidence 3334444 55 88888 899999999999886 555553 678899999999999999976 45
Q ss_pred ccceeeeEEEEeEeccC----CCCCccceeeeccccCceEEEEeCCC-CeEEEEecCCCcEEEeecCCCe------EEEE
Q 011970 155 FSSLKCRSTKIEYIRRG----KPDSGFALFESESLKWPGFVEFDDVN-GKVLTYSAQDSIYKVFDLKNYT------MLYS 223 (474)
Q Consensus 155 ~s~Lk~~~~~iw~i~~G----~~~~~~~lf~~~~~~~~~~V~Fs~~n-Gk~LaS~s~D~tiKlWdl~tg~------~l~t 223 (474)
..++||++... ++.. .+. .|...+..++|+ |+ +++|++++.|++|+|||+.+++ ....
T Consensus 89 ------g~v~vw~~~~~~~~~~~~~---~~~-~h~~~v~~~~~~-~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 157 (416)
T 2pm9_A 89 ------GSLELYSTNEANNAINSMA---RFS-NHSSSVKTVKFN-AKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLT 157 (416)
T ss_dssp ------SCEEEECCSSTTSCCCEEE---ECC-CSSSCCCEEEEC-SSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC
T ss_pred ------CeEEEeecccccccccchh---hcc-CCccceEEEEEc-CCCCCEEEEEcCCCeEEEEECCCCccccccccccc
Confidence 68999998772 2211 111 245567799998 56 8999999999999999999887 4443
Q ss_pred E-----cCCcEEEEEEcCC--ceEEEEecCCCCccEEEEecCCCeEEEEEeec------CcceeEEEEEecCC-CeEEEE
Q 011970 224 I-----SDKHVQEIKISPG--IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL------LHRNKKVDFIEQFN-EKLLVK 289 (474)
Q Consensus 224 l-----~~~~V~~vafSpg--~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h------~~~v~~V~F~~~~~-~~ll~~ 289 (474)
+ +...|.+++|+|+ .+++++ +.|++|++||+++++++.++..| ...+..++|++ ++ ..++++
T Consensus 158 ~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~ 233 (416)
T 2pm9_A 158 PGQSMSSVDEVISLAWNQSLAHVFASA---GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP-KNSTRVATA 233 (416)
T ss_dssp CCCSCCSSCCCCEEEECSSCTTEEEEE---SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS-SCTTEEEEE
T ss_pred cccccCCCCCeeEEEeCCCCCcEEEEE---cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC-CCCCEEEEE
Confidence 3 3468999999984 455554 55899999999999999999876 67899999984 45 467778
Q ss_pred eCCC---cEEEEECCCC-ceEEecc-ccCCceEEEEEcC-CCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCe
Q 011970 290 QENE---NLQILDVRNA-ELMEVSR-TEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNT 361 (474)
Q Consensus 290 ~~D~---tIkIWDv~tg-~~~~~l~-~h~~~v~sv~Fsp-dg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v 361 (474)
+.|+ +|++||++++ +++..+. +|...|.+++|+| ++++|++++ |++|+|||++ ++++.++.+|..+ |
T Consensus 234 ~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-----v 308 (416)
T 2pm9_A 234 TGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW-----C 308 (416)
T ss_dssp ECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC-----C
T ss_pred ECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc-----e
Confidence 8898 9999999997 6778888 9999999999999 999999999 9999999995 9999999999987 6
Q ss_pred eEEEECCCC-CEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCC---CCCCccccCCCCCCccccccccccc
Q 011970 362 NNIYITSDQ-DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNC---SPKVDDELGSSSTGKSKKLNKSSYI 437 (474)
Q Consensus 362 ~svafSpDg-~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (474)
.+++|+||| ++|++++. |++|+|||+.+++.......... .+..... ......+...+.....+
T Consensus 309 ~~~~~s~~~~~~l~s~~~-----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 376 (416)
T 2pm9_A 309 FKTKFAPEAPDLFACASF-----------DNKIEVQTLQNLTNTLDEQETETKQQESETDFW-NNVSREESKEKPSVFHL 376 (416)
T ss_dssp CCEEECTTCTTEEEECCS-----------SSEEEEEESCCCCCSSCC-----------------------CCSCCCSSCC
T ss_pred EEEEECCCCCCEEEEEec-----------CCcEEEEEccCCCCCcccccccccccCCccccc-ccccccccccccccccc
Confidence 899999999 89999876 99999999998876544322000 0000000 00000000001111111
Q ss_pred cccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 438 RSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 438 ~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
....-....|++++|||||++||+|+.|++|+||+.
T Consensus 377 -~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 377 -QAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp -CCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred -cCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 111124457889999999999999999999999984
No 24
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.8e-45 Score=351.99 Aligned_cols=314 Identities=12% Similarity=0.120 Sum_probs=246.4
Q ss_pred EeeCCCeEEe----eeccccceeeEeecCCCceEEEEEEeeC-CCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCcc
Q 011970 103 ALAHSGVCAA----FSRETNRRICFLNVSPDEVIRSLFYNKN-NDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (474)
Q Consensus 103 s~s~dgtikl----W~~~tg~~l~~l~g~~~~~i~sv~fspd-g~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~ 177 (474)
+|...|+-.+ +..++.++..+|.| |.+.|++|+|+|+ +++|||+| .| ++++||++..++.....
T Consensus 9 ~g~d~g~~~~~~~~~~~~~~~l~~tL~G-H~~~V~~v~~sp~~~~~l~S~s----~D------~~i~vWd~~~~~~~~~~ 77 (340)
T 4aow_A 9 SGVDLGTENLYFQSMMTEQMTLRGTLKG-HNGWVTQIATTPQFPDMILSAS----RD------KTIIMWKLTRDETNYGI 77 (340)
T ss_dssp -----------------CEEEEEEEECC-CSSCEEEEEECTTCTTEEEEEE----TT------SCEEEEEECCSSSCSEE
T ss_pred cccCCCCccEEEEEccCCceEEEEEECC-ccCCEEEEEEeCCCCCEEEEEc----CC------CeEEEEECCCCCcccce
Confidence 3444454333 33455567779997 8899999999998 68999976 55 69999999888765443
Q ss_pred ceeee-ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEE
Q 011970 178 ALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLK 253 (474)
Q Consensus 178 ~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIk 253 (474)
++... +|...|..++|+ |||++|++++.|++|++|+...+....... ...+..+.++| +..++++ +.|+.++
T Consensus 78 ~~~~l~~h~~~V~~~~~s-~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~---s~d~~~~ 153 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVIS-SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG---SRDKTIK 153 (340)
T ss_dssp EEEEECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEE---ETTSCEE
T ss_pred eeEEEeCCCCCEEEEEEC-CCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceee---cCCCeEE
Confidence 33322 355678899998 799999999999999999999988776654 46788899997 6666665 4589999
Q ss_pred EEecCCCeEEE-EEeecCcceeEEEEEecCCC-eEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEE
Q 011970 254 ILSIEDGTVLK-VFYHLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTF 331 (474)
Q Consensus 254 LWdi~tG~~L~-tl~~h~~~v~~V~F~~~~~~-~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~ 331 (474)
+||+....... .+.+|...+..++|.+.... .+++++.|++|++||+++++++..+.+|...|.+++|+|+|++|+++
T Consensus 154 ~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 233 (340)
T 4aow_A 154 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASG 233 (340)
T ss_dssp EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEE
Confidence 99998765543 34578889999999754434 45567899999999999999999999999999999999999999999
Q ss_pred c-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecC
Q 011970 332 R-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 409 (474)
Q Consensus 332 s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~g 409 (474)
+ |++|+|||++ ++++..+.+|.. |..++|+|++.+++++. |++|+|||+.+++++.+++.
T Consensus 234 s~Dg~i~iwd~~~~~~~~~~~~~~~------v~~~~~~~~~~~~~~~~------------d~~i~iwd~~~~~~~~~~~~ 295 (340)
T 4aow_A 234 GKDGQAMLWDLNEGKHLYTLDGGDI------INALCFSPNRYWLCAAT------------GPSIKIWDLEGKIIVDELKQ 295 (340)
T ss_dssp ETTCEEEEEETTTTEEEEEEECSSC------EEEEEECSSSSEEEEEE------------TTEEEEEETTTTEEEEEECC
T ss_pred eCCCeEEEEEeccCceeeeecCCce------EEeeecCCCCceeeccC------------CCEEEEEECCCCeEEEeccc
Confidence 9 9999999995 999999987753 78999999998887653 89999999999999999876
Q ss_pred CCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 410 TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 410 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
+.... ....+...|++|+|+|||++||||+.||+|+|||.
T Consensus 296 ~~~~~-------------------------~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 296 EVIST-------------------------SSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp C--------------------------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred cceee-------------------------eccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 54200 00011238999999999999999999999999983
No 25
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.1e-45 Score=381.77 Aligned_cols=317 Identities=11% Similarity=0.123 Sum_probs=271.4
Q ss_pred ccccEEEEEee--cc-EEEEeeCCCeEEeeeccccceeeEeecCCCc---eEEEEEEeeC-CCEEEEEEeecCCCcccee
Q 011970 87 KRTKVIEIVAA--RD-IVFALAHSGVCAAFSRETNRRICFLNVSPDE---VIRSLFYNKN-NDSLITVSVYASDNFSSLK 159 (474)
Q Consensus 87 ~~~~V~~i~~s--~~-~las~s~dgtiklW~~~tg~~l~~l~g~~~~---~i~sv~fspd-g~~Lis~S~~~s~d~s~Lk 159 (474)
|...|..+.|+ ++ +|++++.||++++||..+++++.++.+ |.. .|.+++|+|+ |+.|++++ .|
T Consensus 159 ~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~----~d----- 228 (615)
T 1pgu_A 159 HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT-HHKQGSFVRDVEFSPDSGEFVITVG----SD----- 228 (615)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS-SSCTTCCEEEEEECSTTCCEEEEEE----TT-----
T ss_pred CCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecc-cCCCCceEEEEEECCCCCCEEEEEe----CC-----
Confidence 56778999999 44 899999999999999999999999997 667 8999999999 99999976 45
Q ss_pred eeEEEEeEeccCCCCCccceeee---ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC------CcEE
Q 011970 160 CRSTKIEYIRRGKPDSGFALFES---ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD------KHVQ 230 (474)
Q Consensus 160 ~~~~~iw~i~~G~~~~~~~lf~~---~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~------~~V~ 230 (474)
..+++|++.+|++... +.. .+...+..++|+ +|++|++++.|++|++||+.+++++.++.. ..+.
T Consensus 229 -g~i~vwd~~~~~~~~~---~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 229 -RKISCFDGKSGEFLKY---IEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp -CCEEEEETTTCCEEEE---CCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred -CeEEEEECCCCCEeEE---ecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee
Confidence 6899999999987442 211 344567789997 899999999999999999999999988863 4688
Q ss_pred EEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEec-----------------------------
Q 011970 231 EIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ----------------------------- 281 (474)
Q Consensus 231 ~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~----------------------------- 281 (474)
.+.|+++..+++++ .|+.|++||+.+++++.++.+|...+..++| +.
T Consensus 303 ~~~~~~~~~l~~~~---~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~ 378 (615)
T 1pgu_A 303 GVVATGNGRIISLS---LDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSL 378 (615)
T ss_dssp EEEEEETTEEEEEE---TTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEE
T ss_pred EEEeCCCCeEEEEE---CCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEE
Confidence 99998788888774 4789999999999999999877666665555 21
Q ss_pred ---C-------------------------------------------------------------------------CCe
Q 011970 282 ---F-------------------------------------------------------------------------NEK 285 (474)
Q Consensus 282 ---~-------------------------------------------------------------------------~~~ 285 (474)
. +..
T Consensus 379 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (615)
T 1pgu_A 379 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNY 458 (615)
T ss_dssp ECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSE
T ss_pred EECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCE
Confidence 0 233
Q ss_pred EEEEeC-CCcEEEEECCCCceE-EeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEecc-CCCCcCCCC
Q 011970 286 LLVKQE-NENLQILDVRNAELM-EVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFED-HLLWHPDCN 360 (474)
Q Consensus 286 ll~~~~-D~tIkIWDv~tg~~~-~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~g-H~~~~~~~~ 360 (474)
+++++. |++|++||+.++++. ..+.+|...|.+++|+|||++|++++ |++|+|||+. ++++.++.+ |...
T Consensus 459 l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~----- 533 (615)
T 1pgu_A 459 VAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSK----- 533 (615)
T ss_dssp EEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSC-----
T ss_pred EEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCc-----
Confidence 444555 777788887777665 67788999999999999999999999 9999999994 999999998 9876
Q ss_pred eeEEEECC----------CCCEEEEEecCCCccccccCCCCeEEEEeCCCC-eEEEEecCCCCCCCCccccCCCCCCccc
Q 011970 361 TNNIYITS----------DQDLIISYCKAEPEDQWMEGSAGSINVSSILTG-KCLAKINATNCSPKVDDELGSSSTGKSK 429 (474)
Q Consensus 361 v~svafSp----------Dg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG-~cl~tl~gH~~~~~~~~~~~~~~~~~~~ 429 (474)
|++++|+| ||++||+++. ||+|+|||+.++ +++.++.+|..
T Consensus 534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~-----------dg~i~iw~~~~~~~~~~~~~~h~~----------------- 585 (615)
T 1pgu_A 534 INAISWKPAEKGANEEEIEEDLVATGSL-----------DTNIFIYSVKRPMKIIKALNAHKD----------------- 585 (615)
T ss_dssp EEEEEECCCC------CCSCCEEEEEET-----------TSCEEEEESSCTTCCEEETTSSTT-----------------
T ss_pred eeEEEEcCccccccccccCCCEEEEEcC-----------CCcEEEEECCCCceechhhhcCcc-----------------
Confidence 79999999 9999999987 999999999998 89999999986
Q ss_pred cccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 430 KLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 430 ~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++|+|+|||+ |+|++.||+|++|+.
T Consensus 586 -----------------~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 586 -----------------GVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp -----------------CEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred -----------------ceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 899999999999 999999999999984
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.5e-45 Score=362.00 Aligned_cols=299 Identities=12% Similarity=0.110 Sum_probs=235.1
Q ss_pred cceeeEeecCCCceEEEEEE-----ee-CCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCc--cceeee-ccccCc
Q 011970 118 NRRICFLNVSPDEVIRSLFY-----NK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG--FALFES-ESLKWP 188 (474)
Q Consensus 118 g~~l~~l~g~~~~~i~sv~f-----sp-dg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~--~~lf~~-~~~~~~ 188 (474)
.+++.+|.| |.+.|++|+| +| ||+.|||+| .| ++++||++..++.... .++... +|...+
T Consensus 11 ~~~~~~l~g-H~~~V~~~~~~~s~~~~~d~~~l~sgs----~D------~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V 79 (343)
T 2xzm_R 11 VVKRGILEG-HSDWVTSIVAGFSQKENEDSPVLISGS----RD------KTVMIWKLYEEEQNGYFGIPHKALTGHNHFV 79 (343)
T ss_dssp EEEEEEEEC-CSSCEEEEEECCCSSTTCCCCEEEEEE----TT------SCEEEEEECSSCCSSBSEEEEEEECCCSSCE
T ss_pred eeeeeeecc-chhhhhheeeEEEeecCCCCCEEEEEc----CC------CEEEEEECCcCCcccccccccchhccCCCce
Confidence 456778997 8899999999 76 999999976 55 6999999976653211 111111 355677
Q ss_pred eEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEE
Q 011970 189 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (474)
Q Consensus 189 ~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~t 265 (474)
..|+|+ |+|++|++|+.|++|||||+.+++++.++. ...|.+|+|+| +..|+++ +.|++|+|||+. +++...
T Consensus 80 ~~~~~~-~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~---~~d~~i~~wd~~-~~~~~~ 154 (343)
T 2xzm_R 80 SDLALS-QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSA---GAEREIKLWNIL-GECKFS 154 (343)
T ss_dssp EEEEEC-SSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEE---ETTSCEEEEESS-SCEEEE
T ss_pred EEEEEC-CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEE---cCCCEEEEEecc-CCceee
Confidence 899998 799999999999999999999999998885 46899999998 4566655 458999999997 555555
Q ss_pred Ee---ecCcceeEEEEEecC---------CCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-
Q 011970 266 FY---HLLHRNKKVDFIEQF---------NEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR- 332 (474)
Q Consensus 266 l~---~h~~~v~~V~F~~~~---------~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s- 332 (474)
+. +|...+..++|++.. +..+++++.|++|+||| .++++..++.+|...|.+++|+|||++|+|++
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGK 233 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcC
Confidence 54 688889999998532 25788899999999999 56778888899999999999999999999999
Q ss_pred CCcEEEEeC-C-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEE--Eec
Q 011970 333 NRTVAVWNF-R-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLA--KIN 408 (474)
Q Consensus 333 D~tIklWd~-~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~--tl~ 408 (474)
|++|+|||+ + +.+...+. |... |++++|+||+++|++++ |++|+|||+.+++++. ++.
T Consensus 234 dg~v~iwd~~~~~~~~~~~~-~~~~-----v~~v~~sp~~~~la~~~------------d~~v~iw~~~~~~~~~~~~~~ 295 (343)
T 2xzm_R 234 DKKLLIWDILNLTYPQREFD-AGST-----INQIAFNPKLQWVAVGT------------DQGVKIFNLMTQSKAPVCTIE 295 (343)
T ss_dssp TCEEEEEESSCCSSCSEEEE-CSSC-----EEEEEECSSSCEEEEEE------------SSCEEEEESSSCCSCSEEECC
T ss_pred CCeEEEEECCCCcccceeec-CCCc-----EEEEEECCCCCEEEEEC------------CCCEEEEEeCCCCCCceEEee
Confidence 999999999 4 55566664 3222 79999999999998664 8899999999988765 554
Q ss_pred CCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 409 ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 409 gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.+.. .+. .....+...|++|+|+|||+.||+|+.||+|++|+.
T Consensus 296 ~~~~---~~~--------------------~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 296 AEPI---TKA--------------------EGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp CCSG---GGB--------------------TTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred cCcc---hhh--------------------hhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 2210 000 000001127999999999999999999999999973
No 27
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.2e-45 Score=369.98 Aligned_cols=282 Identities=12% Similarity=0.078 Sum_probs=226.8
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccc------------cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecC
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRET------------NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYAS 152 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~t------------g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s 152 (474)
+...|.++.|+ |++|++++ |+++|+||... +.+...+. ++..|.+|+|+||+ .|++++
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~d~-~l~~~s---- 100 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQ--TEAGVADLTWVGER-GILVAS---- 100 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEE--ESSCEEEEEEETTT-EEEEEE----
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeec--cCCCEEEEEEeCCC-eEEEEE----
Confidence 44568888998 89999888 88999997321 22222222 45679999999997 477765
Q ss_pred CCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEE
Q 011970 153 DNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQ 230 (474)
Q Consensus 153 ~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~ 230 (474)
.| .+|+|||+.+|+..........+|...|.+|+|+ |||++||+|+.|++|||||++++++++++. .+.|.
T Consensus 101 ~d------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~s-pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 101 DS------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVL-SSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp TT------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CC------CEEEEEeccCCCceeEeeccccCCCCCEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 55 6999999999987543332222456778899998 799999999999999999999999999996 46899
Q ss_pred EEEEcC-Cc-eEEEEecCCCCccEEEEecCCCeEEEEEe--ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceE
Q 011970 231 EIKISP-GI-MLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM 306 (474)
Q Consensus 231 ~vafSp-g~-~la~~s~~s~D~tIkLWdi~tG~~L~tl~--~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~ 306 (474)
+++|+| +. +|+++ +.|++|+|||+++|+++.++. .|.+.+.+++|++.++..+++++.|++|+|||+++++++
T Consensus 174 ~~~~~~~~~~~l~s~---s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~ 250 (344)
T 4gqb_B 174 CVAASPHKDSVFLSC---SEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV 250 (344)
T ss_dssp EEEECSSCTTEEEEE---ETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC
T ss_pred EEEecCCCCCceeee---ccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE
Confidence 999997 43 45655 558999999999999999886 455678999998655556677899999999999999999
Q ss_pred EeccccCCceEEEEEcCCC-cEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCC-EEEEEecCCCc
Q 011970 307 EVSRTEFMTPSAFIFLYEN-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPE 382 (474)
Q Consensus 307 ~~l~~h~~~v~sv~Fspdg-~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~-~LaS~s~~~~~ 382 (474)
.++.+|...|++++|+|+| ++|||++ |++|+|||++ |+++ .+.+|... |++|+|+|||+ +|+|++.
T Consensus 251 ~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~-----V~~v~~sp~~~~llas~s~---- 320 (344)
T 4gqb_B 251 LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDF-----VRDATWSPLNHSLLTTVGW---- 320 (344)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSC-----EEEEEECSSSTTEEEEEET----
T ss_pred EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCC-----EEEEEEeCCCCeEEEEEcC----
Confidence 9999999999999999998 5899999 9999999996 7665 57899987 79999999986 6778876
Q ss_pred cccccCCCCeEEEEeCCCCeE
Q 011970 383 DQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 383 ~~~~~s~DgtIklWdi~tG~c 403 (474)
|++|++|++.+...
T Consensus 321 -------D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 321 -------DHQVVHHVVPTEPL 334 (344)
T ss_dssp -------TSCEEEEECCC---
T ss_pred -------CCeEEEEECCCCCC
Confidence 99999999977543
No 28
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.4e-45 Score=365.37 Aligned_cols=278 Identities=12% Similarity=0.169 Sum_probs=239.0
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
|..+|.++.|+ +.+||+++.||+|++||..++++...+.. |...|.+++|+|+|+.|++++ .| ..++
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~~~~v~~~~~sp~g~~lasg~----~d------~~i~ 131 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM-PCTWVMACAYAPSGCAIACGG----LD------NKCS 131 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCEEEECTTSSEEEEES----TT------SEEE
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec-CCCCEEEEEECCCCCEEEEee----CC------CCEE
Confidence 55556666665 89999999999999999999999999997 778899999999999999854 55 6899
Q ss_pred EeEeccCCCCCc---cceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC---
Q 011970 165 IEYIRRGKPDSG---FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP--- 236 (474)
Q Consensus 165 iw~i~~G~~~~~---~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp--- 236 (474)
+|++..++.... ...+. .|...+..++|+ |+++.|++++.|++|||||+++++++.++. ...|..++|+|
T Consensus 132 v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVA-MHTNYLSACSFT-NSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET 209 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEE-ECSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSS
T ss_pred EEEEeccccccccccceeee-ccCCcEEEEEEe-CCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCC
Confidence 999865532111 01121 245667789998 799999999999999999999999999886 45799999986
Q ss_pred CceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecccc--CC
Q 011970 237 GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE--FM 314 (474)
Q Consensus 237 g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h--~~ 314 (474)
|..|+++ +.|++|++||+++|++++++.+|...|.+|+|+ |++..|++++.|++|+|||+++++++..+..+ ..
T Consensus 210 g~~l~sg---s~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~ 285 (354)
T 2pbi_B 210 GNTFVSG---GCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY-PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF 285 (354)
T ss_dssp CCEEEEE---ETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCS
T ss_pred CCEEEEE---eCCCeEEEEECCCCcEEEEecCCCCCeEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccc
Confidence 4567766 458999999999999999999999999999998 67888999999999999999999888776543 35
Q ss_pred ceEEEEEcCCCcEEEEEc-CCcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCe
Q 011970 315 TPSAFIFLYENQLFLTFR-NRTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGS 392 (474)
Q Consensus 315 ~v~sv~Fspdg~llaS~s-D~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dgt 392 (474)
.+.+++|+|+|++|++++ |++|+|||+ +|+++.++.+|..+ |++++|+|||++||||+. |++
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~-----v~~l~~spdg~~l~sgs~-----------D~~ 349 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENR-----VSTLRVSPDGTAFCSGSW-----------DHT 349 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC-----EEEEEECTTSSCEEEEET-----------TSE
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCc-----EEEEEECCCCCEEEEEcC-----------CCC
Confidence 788999999999999999 999999999 59999999999987 799999999999999987 999
Q ss_pred EEEEe
Q 011970 393 INVSS 397 (474)
Q Consensus 393 IklWd 397 (474)
|+||+
T Consensus 350 v~vW~ 354 (354)
T 2pbi_B 350 LRVWA 354 (354)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99996
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2e-44 Score=346.11 Aligned_cols=319 Identities=11% Similarity=0.054 Sum_probs=265.7
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
+..+|..++++ |+.+|++..++.+..|............+ |.+.|.+++|+|+|+.|++++ | ..++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~-----d------g~i~ 75 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLN-HGEVVCAVTISNPTRHVYTGG-----K------GCVK 75 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEEC-CSSCCCEEEECSSSSEEEEEC-----B------SEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceecc-CCCceEEEEEecCCcEEEEcC-----C------CeEE
Confidence 45567777777 99998888888777777665544444444 889999999999999998853 3 5899
Q ss_pred EeEeccCCCCCccceeee-ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcCC-c
Q 011970 165 IEYIRRGKPDSGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISPG-I 238 (474)
Q Consensus 165 iw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~--~l~tl~--~~~V~~vafSpg-~ 238 (474)
||++..++....+..+.. .+...+..++|+ |+|++|++++.|++|++||+.+++ +...+. ...|.+++|+|+ .
T Consensus 76 iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 154 (337)
T 1gxr_A 76 VWDISHPGNKSPVSQLDCLNRDNYIRSCKLL-PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK 154 (337)
T ss_dssp EEETTSTTCCSCSEEEECSCTTSBEEEEEEC-TTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS
T ss_pred EEECCCCCceeeeecccccCCCCcEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC
Confidence 999988876443333321 244567789998 799999999999999999999887 555554 467999999985 4
Q ss_pred eEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEE
Q 011970 239 MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSA 318 (474)
Q Consensus 239 ~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~s 318 (474)
.++++ +.|+.|++||+++++++.++.+|...+..++|+ |++..+++++.|++|++||+++++++..+. |...+.+
T Consensus 155 ~l~~~---~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~ 229 (337)
T 1gxr_A 155 VCFSC---CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS-NDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFS 229 (337)
T ss_dssp EEEEE---ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEE
T ss_pred EEEEE---eCCCcEEEEeCCCCceeeeeecccCceEEEEEC-CCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEE
Confidence 55555 447899999999999999999999999999997 577888889999999999999999988764 6678999
Q ss_pred EEEcCCCcEEEEEc-CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEe
Q 011970 319 FIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSS 397 (474)
Q Consensus 319 v~Fspdg~llaS~s-D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWd 397 (474)
++|+|++++|++++ |++|++||++......+.+|... |.+++|+|||++|++++. ||+|++||
T Consensus 230 ~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~-----------dg~i~~~~ 293 (337)
T 1gxr_A 230 LGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESC-----VLSLKFAYCGKWFVSTGK-----------DNLLNAWR 293 (337)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSC-----EEEEEECTTSSEEEEEET-----------TSEEEEEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccc-----eeEEEECCCCCEEEEecC-----------CCcEEEEE
Confidence 99999999999999 99999999974445578888876 789999999999999986 99999999
Q ss_pred CCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 398 ILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 398 i~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
+.+++++..+ .|.. .|++++|+|||+.|++|+.||+|++|+.
T Consensus 294 ~~~~~~~~~~-~~~~----------------------------------~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 294 TPYGASIFQS-KESS----------------------------------SVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTTCCEEEEE-ECSS----------------------------------CEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCCeEEEEe-cCCC----------------------------------cEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 9999998664 4553 8999999999999999999999999984
No 30
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-46 Score=418.34 Aligned_cols=321 Identities=12% Similarity=0.093 Sum_probs=252.8
Q ss_pred cccccEEEEEee-ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 86 MKRTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 86 ~~~~~V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
.+..+|..|.|+ +++||+++.|++|++||+.++++++++. |.+.|.+++|+|+|+.|++++ .| .+++
T Consensus 56 ~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs----~d------g~V~ 123 (902)
T 2oaj_A 56 EDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF--VPGKITSIDTDASLDWMLIGL----QN------GSMI 123 (902)
T ss_dssp SSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE--CSSCEEEEECCTTCSEEEEEE----TT------SCEE
T ss_pred CCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEc----CC------CcEE
Confidence 367889999999 8899999999999999999999999997 457899999999999999976 45 6899
Q ss_pred EeEeccCCCCCccce-------ee-eccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC----------
Q 011970 165 IEYIRRGKPDSGFAL-------FE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD---------- 226 (474)
Q Consensus 165 iw~i~~G~~~~~~~l-------f~-~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~---------- 226 (474)
|||+.++++. .+.+ .. .+|...|.+|+|+|.++.+|++|+.|++| |||++++++++++..
T Consensus 124 lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~ 201 (902)
T 2oaj_A 124 VYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGD 201 (902)
T ss_dssp EEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCST
T ss_pred EEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcc
Confidence 9999888752 1110 00 12456788999994356799999999999 999999999988853
Q ss_pred ----------CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEE--Ee---ec-------------CcceeEEE
Q 011970 227 ----------KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV--FY---HL-------------LHRNKKVD 277 (474)
Q Consensus 227 ----------~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~t--l~---~h-------------~~~v~~V~ 277 (474)
..|.+|+||| |.+||++ +.|++|+|||+++|+++.. +. .| ...|.+|+
T Consensus 202 ~~~~~~~~h~~~V~~v~fspdg~~lasg---s~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~ 278 (902)
T 2oaj_A 202 FSEKTNEKRTPKVIQSLYHPNSLHIITI---HEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVY 278 (902)
T ss_dssp TCCCTTSCBCCCEEEEEECTTSSEEEEE---ETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEE
T ss_pred cccccccccCCCeEEEEEcCCCCEEEEE---ECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEE
Confidence 4599999998 4556665 5589999999999999874 31 12 34688888
Q ss_pred EEe---cCCCeE--------------------------------------------------------------------
Q 011970 278 FIE---QFNEKL-------------------------------------------------------------------- 286 (474)
Q Consensus 278 F~~---~~~~~l-------------------------------------------------------------------- 286 (474)
|++ |++..+
T Consensus 279 w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~ 358 (902)
T 2oaj_A 279 WMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYF 358 (902)
T ss_dssp EEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHH
T ss_pred EEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCc
Confidence 863 221222
Q ss_pred ---------EEEeCCCcEEEEECCCCceEE-----------------------------------------eccccCCce
Q 011970 287 ---------LVKQENENLQILDVRNAELME-----------------------------------------VSRTEFMTP 316 (474)
Q Consensus 287 ---------l~~~~D~tIkIWDv~tg~~~~-----------------------------------------~l~~h~~~v 316 (474)
++.+.|++|++||+.+|.... .+.||...+
T Consensus 359 ~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v 438 (902)
T 2oaj_A 359 AGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTK 438 (902)
T ss_dssp HHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCC
T ss_pred CCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCC
Confidence 233345667777776664221 134555566
Q ss_pred EEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEE--E----Eec-----cCCCCcCCCCeeEEEECCCCCEEEEEecCCCcc
Q 011970 317 SAFIFLYENQLFLTFR-NRTVAVWNFR-GELV--T----SFE-----DHLLWHPDCNTNNIYITSDQDLIISYCKAEPED 383 (474)
Q Consensus 317 ~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll--~----tl~-----gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~ 383 (474)
.+++|+|||++|||++ |+|||+||++ |++. . .+. +|..+ |++|+|+|||++||+|+.
T Consensus 439 ~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~-----V~svafspdg~~LAsgs~----- 508 (902)
T 2oaj_A 439 RQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELA-----VDKISFAAETLELAVSIE----- 508 (902)
T ss_dssp CCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCC-----EEEEEEETTTTEEEEEET-----
T ss_pred CcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCc-----eeEEEecCCCCeEEEEec-----
Confidence 6677789999999999 9999999995 6431 1 122 78776 799999999999999987
Q ss_pred ccccCCCCeEEEEeCCCC---------------------------------------------eEEEEecCCCCCCCCcc
Q 011970 384 QWMEGSAGSINVSSILTG---------------------------------------------KCLAKINATNCSPKVDD 418 (474)
Q Consensus 384 ~~~~s~DgtIklWdi~tG---------------------------------------------~cl~tl~gH~~~~~~~~ 418 (474)
||+|||||+.++ +|+++|++|+.
T Consensus 509 ------DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~------ 576 (902)
T 2oaj_A 509 ------TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG------ 576 (902)
T ss_dssp ------TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC------
T ss_pred ------CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC------
Confidence 999999999877 46788888875
Q ss_pred ccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 419 ELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++|+||||| +||+|+.|++|+|||.
T Consensus 577 ----------------------------~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 577 ----------------------------KTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp ----------------------------SEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred ----------------------------cEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 89999999999 9999999999999984
No 31
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.6e-46 Score=374.26 Aligned_cols=284 Identities=11% Similarity=0.150 Sum_probs=239.4
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
|..+|.++.|+ +++||+++.||+|++||..+++++.++.+ |...|.+++|+|+|+.|++++ .| .+++
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~~v~~~~~s~~g~~las~~----~d------~~v~ 133 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMECAFAPNGQSVACGG----LD------SACS 133 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-CCTTCCCCEECTTSSEEEECC----SS------SCCE
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec-CCCCEEEEEECCCCCEEEEee----CC------CcEE
Confidence 66677777777 89999999999999999999999999997 778899999999999999854 56 6899
Q ss_pred EeEeccCCCCC-ccc---eeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE-------cCCcEEEEE
Q 011970 165 IEYIRRGKPDS-GFA---LFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-------SDKHVQEIK 233 (474)
Q Consensus 165 iw~i~~G~~~~-~~~---lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl-------~~~~V~~va 233 (474)
||++..+.... ..+ .+. +|...+..++|+|.++..|++|+.|++|+|||+.+++++.++ +...|.+++
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLT-GHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCC-CCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEECCCCccccCCccceeecc-CCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 99986543211 011 122 245566789998655678999999999999999999998877 235799999
Q ss_pred EcC--CceEEEEecCCCCccEEEEecC-CCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecc
Q 011970 234 ISP--GIMLLIFNRSSSHVPLKILSIE-DGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR 310 (474)
Q Consensus 234 fSp--g~~la~~s~~s~D~tIkLWdi~-tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~ 310 (474)
|+| +.+++++ +.|++|+|||++ ++++++++.+|...|.+|+|+ |++..|++++.|++|+|||++++++++++.
T Consensus 213 ~~~~~~~~l~sg---s~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 213 INSLNANMFISG---SCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF-PDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp ECSSSCCEEEEE---ETTSCEEEEETTTTCCCCEEECCCSSCCCEEEEC-TTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred eecCCCCEEEEE---ECCCeEEEEECCCCCcceEEECCcCCCeEEEEEe-cCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 985 4566665 558999999998 568899999999999999998 678889999999999999999999998876
Q ss_pred ccCC-------ceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEe----ccCCCCcCCCCeeEEEECCCCCEEEEEe
Q 011970 311 TEFM-------TPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF----EDHLLWHPDCNTNNIYITSDQDLIISYC 377 (474)
Q Consensus 311 ~h~~-------~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl----~gH~~~~~~~~v~svafSpDg~~LaS~s 377 (474)
.|.. .|.+++|+|+|++|++++ |++|+|||.. ++++.++ .+|... |++++|+|||++|||||
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~-----v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGR-----ISCLGLSSDGSALCTGS 363 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCC-----CCEEEECSSSSEEEEEC
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCc-----eEEEEECCCCCEEEEee
Confidence 5432 488999999999999999 9999999994 9999888 688876 68999999999999998
Q ss_pred cCCCccccccCCCCeEEEEeCCCCe
Q 011970 378 KAEPEDQWMEGSAGSINVSSILTGK 402 (474)
Q Consensus 378 ~~~~~~~~~~s~DgtIklWdi~tG~ 402 (474)
. |++|+||++..++
T Consensus 364 ~-----------D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 364 W-----------DKNLKIWAFSGHR 377 (380)
T ss_dssp T-----------TSCEEEEECCSSS
T ss_pred C-----------CCCEEEEecCCCc
Confidence 7 9999999986543
No 32
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.8e-45 Score=357.69 Aligned_cols=282 Identities=9% Similarity=0.109 Sum_probs=234.4
Q ss_pred ccccEEEEEee---ccEEEEeeCCCeEEeeeccc-----cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccce
Q 011970 87 KRTKVIEIVAA---RDIVFALAHSGVCAAFSRET-----NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSL 158 (474)
Q Consensus 87 ~~~~V~~i~~s---~~~las~s~dgtiklW~~~t-----g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~L 158 (474)
|...|.+|.|+ +++||+++.|++|++|++.+ +.++.++.+ |...|.+++|+|||+.|+++| .|
T Consensus 16 H~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s----~D---- 86 (319)
T 3frx_A 16 HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTLTADGAYALSAS----WD---- 86 (319)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEE----TT----
T ss_pred ccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeC-CcccEEEEEECCCCCEEEEEe----CC----
Confidence 33445555554 37999999999999999864 557888997 789999999999999999976 55
Q ss_pred eeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC
Q 011970 159 KCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP 236 (474)
Q Consensus 159 k~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp 236 (474)
++++|||+.+|++... |. +|...+.+|+|+ |+|++|++|+.|++|||||++ ++++.++. ...|..++|+|
T Consensus 87 --~~v~~wd~~~~~~~~~---~~-~h~~~v~~~~~~-~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~ 158 (319)
T 3frx_A 87 --KTLRLWDVATGETYQR---FV-GHKSDVMSVDID-KKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVP 158 (319)
T ss_dssp --SEEEEEETTTTEEEEE---EE-CCSSCEEEEEEC-TTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECC
T ss_pred --CEEEEEECCCCCeeEE---Ec-cCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEcc
Confidence 6999999999986432 22 245667799998 799999999999999999986 56777775 46899999998
Q ss_pred Cc-------eEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEec
Q 011970 237 GI-------MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS 309 (474)
Q Consensus 237 g~-------~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l 309 (474)
.. .++++ +.|++|++||++++++..++.+|...+..++|+ |++..|++++.|++|+|||+.+++++.++
T Consensus 159 ~~~~~~~~~~l~s~---~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s-p~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 159 NEKADDDSVTIISA---GNDKMVKAWNLNQFQIEADFIGHNSNINTLTAS-PDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp C------CCEEEEE---ETTSCEEEEETTTTEEEEEECCCCSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CCCCCCCccEEEEE---eCCCEEEEEECCcchhheeecCCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 43 45655 558999999999999999999999999999998 67888889999999999999999999988
Q ss_pred cccCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEEEeccCCCCc---CCCCeeEEEECCCCCEEEEEecCCCcccc
Q 011970 310 RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWH---PDCNTNNIYITSDQDLIISYCKAEPEDQW 385 (474)
Q Consensus 310 ~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~tl~gH~~~~---~~~~v~svafSpDg~~LaS~s~~~~~~~~ 385 (474)
.+| ..|.+++|+|++++|+++++..|++|+++ +.++..+..+.... ....+.+++|||||++|++|+.
T Consensus 235 ~~~-~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~------- 306 (319)
T 3frx_A 235 SAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT------- 306 (319)
T ss_dssp ECC-SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET-------
T ss_pred cCC-CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeec-------
Confidence 765 58999999999999999988889999996 77777776442210 0123689999999999999987
Q ss_pred ccCCCCeEEEEeCCCC
Q 011970 386 MEGSAGSINVSSILTG 401 (474)
Q Consensus 386 ~~s~DgtIklWdi~tG 401 (474)
|++|+|||+.|+
T Consensus 307 ----Dg~i~vWd~~t~ 318 (319)
T 3frx_A 307 ----DNVIRVWQVMTA 318 (319)
T ss_dssp ----TSCEEEEEEEEC
T ss_pred ----CceEEEEEEeec
Confidence 999999999775
No 33
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-45 Score=372.43 Aligned_cols=340 Identities=14% Similarity=0.090 Sum_probs=255.5
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEee-CCCEEEEEEeecCCCccceeeeEEEEeEecc---CCC
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRR---GKP 173 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fsp-dg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~---G~~ 173 (474)
++.+++++ .|+ .+|+++.+|..+|.+.|.+|+|+| +|+.|||+| .| ++++||++.+ ++.
T Consensus 39 ~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s----~d------g~v~vwd~~~~~~~~~ 101 (437)
T 3gre_A 39 QEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGS----DQ------GVIKIWNLKEIIVGEV 101 (437)
T ss_dssp CCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEE----TT------SEEEEEEHHHHHTTCC
T ss_pred cccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEec----CC------ceEEEeECcccccCcc
Confidence 55555554 498 569999999445889999999999 999999976 55 6999999977 653
Q ss_pred CCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecC---CCeEEEEEcCCcEEEEEEc---------------
Q 011970 174 DSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK---NYTMLYSISDKHVQEIKIS--------------- 235 (474)
Q Consensus 174 ~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~---tg~~l~tl~~~~V~~vafS--------------- 235 (474)
... .+...|...+.+|+|+ |+|++|++++.|++|+|||+. +++++..+..+.|..+.|+
T Consensus 102 ~~~--~~~~~h~~~v~~~~~~-~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 102 YSS--SLTYDCSSTVTQITMI-PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp CSC--SEEEECSSCEEEEEEC-TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred cce--eeeccCCCCEEEEEEe-CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE
Confidence 321 2222245677899998 799999999999999999994 7777776655556666544
Q ss_pred -C-CceEEEEecCCCCccEEEEecCCCeEEEEEee--cCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecc-
Q 011970 236 -P-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH--LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR- 310 (474)
Q Consensus 236 -p-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~--h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~- 310 (474)
| +.+++++ +.|++|++||+++++++.++.+ |...+.+++|+ |++..|++++.|++|+|||+++++++..+.
T Consensus 179 ~~~~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 254 (437)
T 3gre_A 179 NEEKSLLVAL---TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICID-EECCVLILGTTRGIIDIWDIRFNVLIRSWSF 254 (437)
T ss_dssp CSSCEEEEEE---ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEEC-TTSCEEEEEETTSCEEEEETTTTEEEEEEBC
T ss_pred cCCCCEEEEE---eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEEC-CCCCEEEEEcCCCeEEEEEcCCccEEEEEec
Confidence 3 5566665 4589999999999999999998 88899999997 668888889999999999999999998875
Q ss_pred ccCCceEEEE----EcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcC---------------------CCCeeE
Q 011970 311 TEFMTPSAFI----FLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHP---------------------DCNTNN 363 (474)
Q Consensus 311 ~h~~~v~sv~----Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~---------------------~~~v~s 363 (474)
+|...|.+++ |+|++++|++++ |++|+|||++ |+++.++.+|...+. ...|++
T Consensus 255 ~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~ 334 (437)
T 3gre_A 255 GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALST 334 (437)
T ss_dssp TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCC
T ss_pred CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEE
Confidence 7778999994 556899999999 9999999995 999999998853221 112678
Q ss_pred EEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcc--cccccccc-cccc
Q 011970 364 IYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKS--KKLNKSSY-IRST 440 (474)
Q Consensus 364 vafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~ 440 (474)
++|+ ++++|++++. |++|++||+.+|+++.++.+|...........-...+.. ......+. ....
T Consensus 335 l~~~-~~~~l~s~~~-----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (437)
T 3gre_A 335 ISVS-NDKILLTDEA-----------TSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDD 402 (437)
T ss_dssp EEEE-TTEEEEEEGG-----------GTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC---------
T ss_pred EEEC-CceEEEecCC-----------CCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCc
Confidence 9999 8899999887 999999999999999999998641000000000000000 00000000 0011
Q ss_pred ccccccCEEEEEEcCC--CCEEEEEcCCCcEEEcc
Q 011970 441 VGEALEDITSLFYDEE--RNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 441 ~~~~l~~V~slafSpD--g~~LaSgs~DgtVklWd 473 (474)
...+.+.|++|+|+|+ +..|+||+.||+|+||+
T Consensus 403 ~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 403 SLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ----CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 1235669999999999 88999999999999996
No 34
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-46 Score=402.63 Aligned_cols=311 Identities=13% Similarity=0.029 Sum_probs=229.4
Q ss_pred cEEEEeeCCCeEEeeecccccee----eEeecCCCceEEEEEEeeC------CCEEEEEEeecCCCccceeeeEEEEeEe
Q 011970 99 DIVFALAHSGVCAAFSRETNRRI----CFLNVSPDEVIRSLFYNKN------NDSLITVSVYASDNFSSLKCRSTKIEYI 168 (474)
Q Consensus 99 ~~las~s~dgtiklW~~~tg~~l----~~l~g~~~~~i~sv~fspd------g~~Lis~S~~~s~d~s~Lk~~~~~iw~i 168 (474)
+++|+++.|++|+||++.++++. .++.+ |...|++|+|+|+ +++||++| .| .+++||++
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~-~~~~V~~v~wsp~~~~~~~~~~LAs~s----~D------gtvrlWd~ 242 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVH-SFGEVWDLKWHEGCHAPHLVGCLSFVS----QE------GTINFLEI 242 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEE-CCCSEEEEEECSSCCCSSSSCEEEEEE----TT------SCEEEEEC
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEEe-cCCcEEEEEECCCCCCCCCCceEEEEe----cC------CeEEEEEc
Confidence 35788889999999999988863 34554 6678999999997 57999977 45 69999999
Q ss_pred ccCCCCCc------cceeee-ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe-EEEEE--cCCcEEEE--EEcC
Q 011970 169 RRGKPDSG------FALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSI--SDKHVQEI--KISP 236 (474)
Q Consensus 169 ~~G~~~~~------~~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~-~l~tl--~~~~V~~v--afSp 236 (474)
..++.... .+.+.. .+...+.+|+|+ +++ .||+|+.|++|+|||+.++. ++.++ |...|.+| +|+|
T Consensus 243 ~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s-~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~ 320 (524)
T 2j04_B 243 IDNATDVHVFKMCEKPSLTLSLADSLITTFDFL-SPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD 320 (524)
T ss_dssp CCCSSSSSEEECCCSCSEEECCTTTCEEEEEES-SSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT
T ss_pred CCCccccccceeecCceEEEEcCCCCEEEEEec-CCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC
Confidence 88764211 111121 244677899998 444 79999999999999999875 33444 56789999 5677
Q ss_pred C--ceEEEEecCCCCccEEEEecCCCeEEEEEeecCc--ceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecccc
Q 011970 237 G--IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH--RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE 312 (474)
Q Consensus 237 g--~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~--~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h 312 (474)
+ .+||++ +.|++|||||++++++++++.+|.. .+.+|+|+ |++..+++++.|++|+|||++++.++.++.+|
T Consensus 321 ~g~~~laS~---S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs-p~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH 396 (524)
T 2j04_B 321 FEDTVVSTV---AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC-PQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR 396 (524)
T ss_dssp TSCCEEEEE---ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE-TTTTEEEEECSSSEEEEEETTCTTCCEEEEEC
T ss_pred CCCeEEEEe---ccCCeEEEEECCCCCcccccccccccCcccceEeC-CCcCeEEEeCCCCcEEEEECcccccceeeecC
Confidence 5 466766 5589999999999999999988764 57899998 66788888999999999999999999999999
Q ss_pred CCceEEEEEcCCCcEEEEEc-CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCC
Q 011970 313 FMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG 391 (474)
Q Consensus 313 ~~~v~sv~Fspdg~llaS~s-D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dg 391 (474)
...|++++|||+|++|+|++ |++|+|||+.+.++++++.+..++....+++++|+|||+.+.. +.
T Consensus 397 ~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~--------------~~ 462 (524)
T 2j04_B 397 ETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRI--------------DS 462 (524)
T ss_dssp SSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEE--------------CC
T ss_pred CCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEc--------------cC
Confidence 99999999999999999999 9999999997655544433222322223689999999997643 23
Q ss_pred eEEEEeCC-CCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCC---EEEEEcCCC
Q 011970 392 SINVSSIL-TGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN---EIYTGNRHG 467 (474)
Q Consensus 392 tIklWdi~-tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~---~LaSgs~Dg 467 (474)
.+++|+.. +|+|+.+|.+|.. .|++|+||||++ .||+|+.||
T Consensus 463 ~~~~~~~~~~g~~~~~l~gh~~----------------------------------~V~~Vafsp~~~~~~~lAsg~~~g 508 (524)
T 2j04_B 463 SYEVYPLTVNDVSKAKIDAHGI----------------------------------NITCTKWNETSAGGKCYAFSNSAG 508 (524)
T ss_dssp CCCCCC-------------CCC----------------------------------SCCCEEECCSTTTTTEEEEECTTS
T ss_pred CceecccccCCcceeeecCCCc----------------------------------eEEEEECCCCCCccHHHHhhccCc
Confidence 45555543 7999999999986 899999999965 999999999
Q ss_pred cEEEccC
Q 011970 468 LVHVWSN 474 (474)
Q Consensus 468 tVklWd~ 474 (474)
+||||+.
T Consensus 509 ~vrlw~l 515 (524)
T 2j04_B 509 LLTLEYL 515 (524)
T ss_dssp EEEEEEC
T ss_pred eEEEEEc
Confidence 9999974
No 35
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-45 Score=417.75 Aligned_cols=323 Identities=11% Similarity=0.113 Sum_probs=249.3
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeecccccee-----------eEeecCCCceEEEEEEeeCC-CEEEEEEeecC
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRI-----------CFLNVSPDEVIRSLFYNKNN-DSLITVSVYAS 152 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l-----------~~l~g~~~~~i~sv~fspdg-~~Lis~S~~~s 152 (474)
+...|..+.|+ +++||+++.||+|++||+.++++. .++.+ |...|++|+|+|++ ..|+++ +
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~-h~~~V~sl~~sp~~~~~l~~g----~ 171 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAA-RLSPIVSIQWNPRDIGTVLIS----Y 171 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSS-CCCCCCEEEEETTEEEEEEEE----C
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccccccccc-CCCCeEEEEEccCCCCEEEEE----e
Confidence 55678899998 999999999999999999988865 23444 77899999999974 567764 3
Q ss_pred CCccceeeeEEEEeEeccCCCCCcccee--------------eeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCC
Q 011970 153 DNFSSLKCRSTKIEYIRRGKPDSGFALF--------------ESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY 218 (474)
Q Consensus 153 ~d~s~Lk~~~~~iw~i~~G~~~~~~~lf--------------~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg 218 (474)
.| .++ |||++.+++...+... ...|...+.+|+|+ |||++||+++.|++|+|||+++|
T Consensus 172 ~d------g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs-pdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 172 EY------VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH-PNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp SS------CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC-TTSSEEEEEETTCCEEEEETTTC
T ss_pred CC------CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc-CCCCEEEEEECCCeEEEEECCCC
Confidence 56 689 9999988864322211 00123567899998 79999999999999999999999
Q ss_pred eEEEE--E-----c-------------CCcEEEEEEc----CC--ceEEEEecC--------------------------
Q 011970 219 TMLYS--I-----S-------------DKHVQEIKIS----PG--IMLLIFNRS-------------------------- 246 (474)
Q Consensus 219 ~~l~t--l-----~-------------~~~V~~vafS----pg--~~la~~s~~-------------------------- 246 (474)
+++.. + + ...|.+|+|+ |+ .++++++..
T Consensus 244 ~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 323 (902)
T 2oaj_A 244 HMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEG 323 (902)
T ss_dssp CEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHH
T ss_pred cEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhh
Confidence 98764 3 1 1269999995 43 334443211
Q ss_pred -----------------------------------------------CCCccEEEEecCCCeEEEE--------------
Q 011970 247 -----------------------------------------------SSHVPLKILSIEDGTVLKV-------------- 265 (474)
Q Consensus 247 -----------------------------------------------s~D~tIkLWdi~tG~~L~t-------------- 265 (474)
+.|++|++||+.+|+.+..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~ 403 (902)
T 2oaj_A 324 MKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPL 403 (902)
T ss_dssp HHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTB
T ss_pred hhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCC
Confidence 0135678888777754322
Q ss_pred ---------------------------EeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceE-----Ee-c---
Q 011970 266 ---------------------------FYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM-----EV-S--- 309 (474)
Q Consensus 266 ---------------------------l~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~-----~~-l--- 309 (474)
|.+|...+.+|+|+ |++..|++++.|++|||||+.++++. .. +
T Consensus 404 v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~s-pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~ 482 (902)
T 2oaj_A 404 ATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPA-EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRT 482 (902)
T ss_dssp EEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCC-SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHH
T ss_pred eeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccccc-ccCcEEEEecCCCcEEEEECCCccccCCceEEeechhh
Confidence 22333334445554 46677888899999999999998532 11 1
Q ss_pred --cccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-C------------------------------------------
Q 011970 310 --RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-G------------------------------------------ 343 (474)
Q Consensus 310 --~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G------------------------------------------ 343 (474)
.+|...|++++|+|||++||+++ |++|+|||+. +
T Consensus 483 ~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (902)
T 2oaj_A 483 LNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVR 562 (902)
T ss_dssp TTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCS
T ss_pred cCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCC
Confidence 28999999999999999999999 9999999995 5
Q ss_pred ---cEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEE--E---ec-CCCCCC
Q 011970 344 ---ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLA--K---IN-ATNCSP 414 (474)
Q Consensus 344 ---~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~--t---l~-gH~~~~ 414 (474)
+++.+|++|..+ |++|+||||| +||+|+. |++|+|||+.+++.+. + +. +|+.
T Consensus 563 ~g~~~~~~l~~h~~~-----V~svafSpdG-~lAsgs~-----------D~tv~lwd~~~~~~~~~~~~~~~~~gh~~-- 623 (902)
T 2oaj_A 563 QGFMPSTAVHANKGK-----TSAINNSNIG-FVGIAYA-----------AGSLMLIDRRGPAIIYMENIREISGAQSA-- 623 (902)
T ss_dssp EEEEEEEEECCCSCS-----EEEEEECBTS-EEEEEET-----------TSEEEEEETTTTEEEEEEEGGGTCSSCCC--
T ss_pred CccceeEEEEcCCCc-----EEEEEecCCc-EEEEEeC-----------CCcEEEEECCCCeEEEEeehhHhcccccc--
Confidence 358899999987 7999999999 9999987 9999999998887765 2 32 7775
Q ss_pred CCccccCCCCCCccccccccccccccccccccCEEEEEEc-----CCC---CEEEEEcCCCcEEEccC
Q 011970 415 KVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD-----EER---NEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafS-----pDg---~~LaSgs~DgtVklWd~ 474 (474)
+|++|+|| ||| ++|+||+.|++|++||.
T Consensus 624 --------------------------------~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 624 --------------------------------CVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp --------------------------------CEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred --------------------------------ceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 89999999 886 89999999999999983
No 36
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.9e-45 Score=366.66 Aligned_cols=283 Identities=12% Similarity=0.116 Sum_probs=226.1
Q ss_pred cccccEEEEEee--ccEEEEeeC------CCeEEeeeccccceee----EeecCCCceEEEEEEeeCCCEEEEEEeecCC
Q 011970 86 MKRTKVIEIVAA--RDIVFALAH------SGVCAAFSRETNRRIC----FLNVSPDEVIRSLFYNKNNDSLITVSVYASD 153 (474)
Q Consensus 86 ~~~~~V~~i~~s--~~~las~s~------dgtiklW~~~tg~~l~----~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~ 153 (474)
.|...|.+|.|+ |.+||++|. |+++++|+..+|+... ... .|...|.+|+|+|++..| +++ .
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~s~d~~~l-~~s----~ 113 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGV-QTEAGVTDVAWVSEKGIL-VAS----D 113 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEE-ECSSCEEEEEEETTTEEE-EEE----T
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccC-CCCCCEEEEEEcCCCCEE-EEE----C
Confidence 478889999999 999999998 7889999988776432 233 367889999999999754 444 4
Q ss_pred CccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEE
Q 011970 154 NFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQE 231 (474)
Q Consensus 154 d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~ 231 (474)
| .+++|||+.+|+......+-..+|...|.+|+|+ |||++|++|+.|++|+|||+.+++++.++. ...|.+
T Consensus 114 d------g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~s-pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 186 (357)
T 4g56_B 114 S------GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVF-SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNC 186 (357)
T ss_dssp T------SCEEEC--------CCCCEEECCCSSCEEEEEEC-SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred C------CEEEEeeccccceeEEEeeccCCCCCCEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 4 5899999999886443232222355678899998 799999999999999999999999999886 468999
Q ss_pred EEEcCC--ceEEEEecCCCCccEEEEecCCCeEEEEEe--ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEE
Q 011970 232 IKISPG--IMLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME 307 (474)
Q Consensus 232 vafSpg--~~la~~s~~s~D~tIkLWdi~tG~~L~tl~--~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~ 307 (474)
|+|+|+ ..++++ +.|++|+|||+++|+++..+. .|...+.+|+|+|..+..+++++.|++|+|||++++++++
T Consensus 187 v~~s~~~~~~~~s~---~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~ 263 (357)
T 4g56_B 187 VAACPGKDTIFLSC---GEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ 263 (357)
T ss_dssp EEECTTCSSCEEEE---ETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE
T ss_pred EEEccCCCceeeee---ccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE
Confidence 999973 356665 458999999999999887765 3556789999985444556668899999999999999999
Q ss_pred eccccCCceEEEEEcCCC-cEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECC-CCCEEEEEecCCCcc
Q 011970 308 VSRTEFMTPSAFIFLYEN-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS-DQDLIISYCKAEPED 383 (474)
Q Consensus 308 ~l~~h~~~v~sv~Fspdg-~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSp-Dg~~LaS~s~~~~~~ 383 (474)
++.+|...|.+++|+|++ ++|||++ |++|+|||++ |++++.+ +|... |++|+|+| |+++|||+|.
T Consensus 264 ~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~-----V~~vafsP~d~~~l~s~s~----- 332 (357)
T 4g56_B 264 TSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDF-----VTGVAWSPLDHSKFTTVGW----- 332 (357)
T ss_dssp EECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSC-----EEEEEECSSSTTEEEEEET-----
T ss_pred EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCC-----EEEEEEeCCCCCEEEEEcC-----
Confidence 999999999999999987 6789998 9999999996 8888766 79887 79999999 8999999987
Q ss_pred ccccCCCCeEEEEeCCCC
Q 011970 384 QWMEGSAGSINVSSILTG 401 (474)
Q Consensus 384 ~~~~s~DgtIklWdi~tG 401 (474)
||+|++||+.+.
T Consensus 333 ------Dg~v~iW~~~~~ 344 (357)
T 4g56_B 333 ------DHKVLHHHLPSE 344 (357)
T ss_dssp ------TSCEEEEECC--
T ss_pred ------CCeEEEEECCCC
Confidence 999999999653
No 37
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.5e-44 Score=406.42 Aligned_cols=364 Identities=15% Similarity=0.179 Sum_probs=293.5
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
|...|..+.|+ +++||+++.||+|++||..+|+++.++.+ |...|.+++|+|||+.||+++ .| ++++
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~----~d------~~v~ 682 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDSYIATCS----AD------KKVK 682 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE----TT------SEEE
T ss_pred ccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCCEEEEEe----CC------CeEE
Confidence 78899999999 99999999999999999999999999996 788999999999999999976 45 6899
Q ss_pred EeEeccCCCCCccceeeeccccCceEEEEeCC-CCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceE
Q 011970 165 IEYIRRGKPDSGFALFESESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIML 240 (474)
Q Consensus 165 iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~-nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~l 240 (474)
|||+.+|++... +. ++...+..++|++. ++.+|++|+.|++|++||+.+++++.++. ...|.+++|+| +..+
T Consensus 683 vwd~~~~~~~~~---~~-~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 683 IWDSATGKLVHT---YD-EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EEETTTCCEEEE---EE-CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEE
T ss_pred EEECCCCceEEE---Ec-CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEE
Confidence 999999987442 22 24566779999832 56799999999999999999999999886 46899999998 5566
Q ss_pred EEEecCCCCccEEEEecCCCeEEEEEe-----------------------------------------------------
Q 011970 241 LIFNRSSSHVPLKILSIEDGTVLKVFY----------------------------------------------------- 267 (474)
Q Consensus 241 a~~s~~s~D~tIkLWdi~tG~~L~tl~----------------------------------------------------- 267 (474)
+++ +.|++|++||+.+++++.++.
T Consensus 759 ~s~---s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 759 ASC---SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEI 835 (1249)
T ss_dssp EEE---ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEE---ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEE
Confidence 665 458999999999888776653
Q ss_pred --ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeC---
Q 011970 268 --HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF--- 341 (474)
Q Consensus 268 --~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~--- 341 (474)
+|...+..++|+ |++..+++++.|++|++||+.+++++..+.+|...|.+++|+|+|++|++++ |++|++||+
T Consensus 836 ~~~~~~~v~~~~~s-p~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 836 HTGHHSTIQYCDFS-PYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKV 914 (1249)
T ss_dssp ECSSSSCCCEEEEC-SSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHH
T ss_pred cCCCCCceEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcccc
Confidence 566778899997 6788888899999999999999999999999999999999999999999998 999999873
Q ss_pred -----------------------------------------------------------------------------CCc
Q 011970 342 -----------------------------------------------------------------------------RGE 344 (474)
Q Consensus 342 -----------------------------------------------------------------------------~G~ 344 (474)
+|+
T Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~ 994 (1249)
T 3sfz_A 915 CKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR 994 (1249)
T ss_dssp HSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS
T ss_pred ceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc
Confidence 245
Q ss_pred EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCC----------------------------cc-ccccCCCCeEEE
Q 011970 345 LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEP----------------------------ED-QWMEGSAGSINV 395 (474)
Q Consensus 345 ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~----------------------------~~-~~~~s~DgtIkl 395 (474)
++.++.+|... |.+++|+|||++|++++.... +. -++++.|++|++
T Consensus 995 ~~~~~~~h~~~-----v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~v 1069 (1249)
T 3sfz_A 995 VFSSGVGHKKA-----VRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKV 1069 (1249)
T ss_dssp CEEECCCCSSC-----CCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEE
T ss_pred eeeecccCCCc-----eEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEE
Confidence 56677788876 689999999999999875211 00 045667889999
Q ss_pred EeCCCCeEEEEecCCCCCCCCccccCCCCCCcc---cccccccccccccc-----ccccCEEEEEEcCCCCEEEEEcCCC
Q 011970 396 SSILTGKCLAKINATNCSPKVDDELGSSSTGKS---KKLNKSSYIRSTVG-----EALEDITSLFYDEERNEIYTGNRHG 467 (474)
Q Consensus 396 Wdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~l~~V~slafSpDg~~LaSgs~Dg 467 (474)
||+.+|+++.++.+|......-..++.+...++ .....+|++....+ .+...|++++|||||+.||||+.||
T Consensus 1070 wd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg 1149 (1249)
T 3sfz_A 1070 WNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNG 1149 (1249)
T ss_dssp EETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred EECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCC
Confidence 999999999999999862221122222222222 22344555433222 3445899999999999999999999
Q ss_pred cEEEccC
Q 011970 468 LVHVWSN 474 (474)
Q Consensus 468 tVklWd~ 474 (474)
+|+|||.
T Consensus 1150 ~i~vwd~ 1156 (1249)
T 3sfz_A 1150 EIRIWNV 1156 (1249)
T ss_dssp CCCEEES
T ss_pred EEEEEEC
Confidence 9999984
No 38
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-44 Score=364.18 Aligned_cols=286 Identities=10% Similarity=0.084 Sum_probs=219.5
Q ss_pred ceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeee------ccccCceEEEEeCCCCeEEEE
Q 011970 130 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES------ESLKWPGFVEFDDVNGKVLTY 203 (474)
Q Consensus 130 ~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~------~~~~~~~~V~Fs~~nGk~LaS 203 (474)
-+|++|+|+|||+.|++++.+.+.. .+. ..++||++..+.......+... .+-.+|.+++|+ +..+++
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~s--Gi~-N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~---~~~~~~ 88 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNN--GIP-NKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS---KGIILV 88 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSS--SCC-EEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE---TTEEEE
T ss_pred CCEEEEEEeCCCcEEEEECCCcccc--CCC-CEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC---CCEEEE
Confidence 3599999999999999987433210 110 4789999876654221111110 123455567765 445544
Q ss_pred -----------ecCCCcEEEeecCCCeE-E---EEEc-------CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCe
Q 011970 204 -----------SAQDSIYKVFDLKNYTM-L---YSIS-------DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT 261 (474)
Q Consensus 204 -----------~s~D~tiKlWdl~tg~~-l---~tl~-------~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~ 261 (474)
++.|+++|+|++.++.. + .... +..|..|+|||++.+++.++++.|++|||||+++++
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~ 168 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT 168 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE
T ss_pred EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc
Confidence 45689999999876542 2 2221 246999999995554433335679999999999999
Q ss_pred EEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEE--eccccCCceEEEEEcCCCcEEEEEc-CC----
Q 011970 262 VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME--VSRTEFMTPSAFIFLYENQLFLTFR-NR---- 334 (474)
Q Consensus 262 ~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~--~l~~h~~~v~sv~Fspdg~llaS~s-D~---- 334 (474)
++.++. |.+.|.+|+|+ |++..+++++ |+++++|+..+++++. +..+|...|++++|+|||+++++++ |+
T Consensus 169 ~~~~~~-~~~~V~~v~fs-pdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 169 EKFEIE-TRGEVKDLHFS-TDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp EEEEEE-CSSCCCEEEEC-TTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred EEEEeC-CCCceEEEEEc-cCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 999997 55789999998 5666665555 6677888888888764 4677999999999999999999998 77
Q ss_pred cEEEEeCC-CcE----EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEe-c
Q 011970 335 TVAVWNFR-GEL----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI-N 408 (474)
Q Consensus 335 tIklWd~~-G~l----l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl-~ 408 (474)
++++||+. ++. ...+.+|... |++++|||||++||+|+. |++|+|||+.+|++++++ +
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~-----V~~~~~Spdg~~lasgs~-----------D~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVTNRFKG-----ITSMDVDMKGELAVLASN-----------DNSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEESSCSC-----EEEEEECTTSCEEEEEET-----------TSCEEEEETTTTEEEEEETT
T ss_pred EEeecccccceecceeeeeecCCCCC-----eEeEEECCCCCceEEEcC-----------CCEEEEEECCCCcEEEEecC
Confidence 78999984 443 4578899887 799999999999999987 999999999999999985 7
Q ss_pred CCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 409 ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 409 gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
+|.. .|++|+|||||++|||||.|+||||||+
T Consensus 310 gH~~----------------------------------~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 310 AHSF----------------------------------AITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp SSSS----------------------------------CEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred cccC----------------------------------CEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 9996 8999999999999999999999999984
No 39
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.7e-44 Score=355.58 Aligned_cols=285 Identities=12% Similarity=0.081 Sum_probs=226.4
Q ss_pred cEEEEEee--ccEEEEeeCCCeEEeeeccccceee--EeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEE
Q 011970 90 KVIEIVAA--RDIVFALAHSGVCAAFSRETNRRIC--FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (474)
Q Consensus 90 ~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~--~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~i 165 (474)
.|..+.|+ +++||+++.|++|++|+.++++.++ .+..+|...|++|+|+|+|++||++| .| .+++|
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s----~D------~~v~i 87 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS----FD------ATTCI 87 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE----TT------SCEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE----CC------CcEEE
Confidence 45555665 9999999999999999999887554 33345889999999999999999976 55 68999
Q ss_pred eEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe---EEEEEc--CCcEEEEEEcC-Cce
Q 011970 166 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSIS--DKHVQEIKISP-GIM 239 (474)
Q Consensus 166 w~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~---~l~tl~--~~~V~~vafSp-g~~ 239 (474)
|++..++...- ..+. +|...+..|+|+ |+|++||+|+.|++|+|||+.++. ++..+. ...|.+++|+| +.+
T Consensus 88 w~~~~~~~~~~-~~~~-~h~~~v~~v~~s-p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 88 WKKNQDDFECV-TTLE-GHENEVKSVAWA-PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEECCC-EEEE-EEEC-CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEccCCCeEEE-EEcc-CCCCCceEEEEe-CCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 99887753110 1122 245677899998 799999999999999999998763 556664 46799999998 556
Q ss_pred EEEEecCCCCccEEEEecCCCe--EEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCC---------------
Q 011970 240 LLIFNRSSSHVPLKILSIEDGT--VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN--------------- 302 (474)
Q Consensus 240 la~~s~~s~D~tIkLWdi~tG~--~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~t--------------- 302 (474)
||++ +.|++|+|||+++++ ++.++.+|...|.+|+|+ |++..|++++.|++|+|||+..
T Consensus 165 l~s~---s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s-p~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~ 240 (345)
T 3fm0_A 165 LASA---SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD-PSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPS 240 (345)
T ss_dssp EEEE---ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CE
T ss_pred EEEE---eCCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC-CCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCc
Confidence 6665 458999999999885 568899999999999998 6788899999999999999632
Q ss_pred CceEEeccc-cCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-Cc---------EEEEeccCCCCcCCCCeeEEEECCCC
Q 011970 303 AELMEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE---------LVTSFEDHLLWHPDCNTNNIYITSDQ 370 (474)
Q Consensus 303 g~~~~~l~~-h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~---------ll~tl~gH~~~~~~~~v~svafSpDg 370 (474)
.+|+.++.+ |...|++++|+|++.+|++++ |++|++|+.+ +. ....+.+|... |++|+|+|++
T Consensus 241 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~-----V~~v~~~p~~ 315 (345)
T 3fm0_A 241 WKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQD-----VNCVAWNPKE 315 (345)
T ss_dssp EEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSC-----EEEEEECSSS
T ss_pred cceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCc-----EeEeEEeCCC
Confidence 245666665 899999999999999999999 9999999985 32 12345688876 7999999998
Q ss_pred -CEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEe
Q 011970 371 -DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 371 -~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl 407 (474)
.+|||++. ||+|+||++.+++-+..+
T Consensus 316 ~~~laS~s~-----------Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 316 PGLLASCSD-----------DGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp TTEEEEEET-----------TSCEEEEEECC-------
T ss_pred ceEEEEcCC-----------CCcEEEEEecCCCCcccc
Confidence 59999987 999999999988766544
No 40
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-43 Score=350.82 Aligned_cols=282 Identities=13% Similarity=0.102 Sum_probs=220.1
Q ss_pred ccccEEEEEeeccEEEEeeCCCeEEeeecccc--ceeeEee-cCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEE
Q 011970 87 KRTKVIEIVAARDIVFALAHSGVCAAFSRETN--RRICFLN-VSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 163 (474)
Q Consensus 87 ~~~~V~~i~~s~~~las~s~dgtiklW~~~tg--~~l~~l~-g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~ 163 (474)
|..+|.++.|+.++||+++.||+|++|++.++ +++.++. +.|...|++|+|+|+|+.|+++| .| +++
T Consensus 13 h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s----~D------~~v 82 (330)
T 2hes_X 13 YKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS----FD------STV 82 (330)
T ss_dssp CSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE----TT------SCE
T ss_pred CCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe----CC------CcE
Confidence 56678888999889999999999999999876 5677773 44889999999999999999976 55 689
Q ss_pred EEeEeccCCCC--Cc--cceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecC-C---CeEEEEEc--CCcEEEEE
Q 011970 164 KIEYIRRGKPD--SG--FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-N---YTMLYSIS--DKHVQEIK 233 (474)
Q Consensus 164 ~iw~i~~G~~~--~~--~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~-t---g~~l~tl~--~~~V~~va 233 (474)
+||++..+... .. ...+. +|...+..|+|+ |||++||+|+.|++|+|||+. . ++++.++. ...|.+|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s-p~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIE-GHENEVKGVAWS-NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp EEEEC-------CCCEEEEEEC-----CEEEEEEC-TTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred EEEEcccCcCccccceeEEEEc-CCCCcEEEEEEC-CCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 99998543211 00 01122 355677899998 799999999999999999994 2 35777775 46799999
Q ss_pred EcC-CceEEEEecCCCCccEEEEecCCC--eEEEEEeecCcceeEEEEEecC-CCeEEEEeCCCcEEEEECCCC------
Q 011970 234 ISP-GIMLLIFNRSSSHVPLKILSIEDG--TVLKVFYHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNA------ 303 (474)
Q Consensus 234 fSp-g~~la~~s~~s~D~tIkLWdi~tG--~~L~tl~~h~~~v~~V~F~~~~-~~~ll~~~~D~tIkIWDv~tg------ 303 (474)
|+| +.+|+++ +.|++|||||+.++ +++.++.+|...|++++|++.. +..|++++.|++|+|||+.++
T Consensus 161 ~~p~~~~l~s~---s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 161 WHPSEALLASS---SYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp ECSSSSEEEEE---ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred ECCCCCEEEEE---cCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 998 5556655 55899999999887 7899999999999999998533 346777899999999999876
Q ss_pred --ceEEeccc-cCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-Cc--EEE-EeccCCC-CcCCCCeeEEEECC--CCCE
Q 011970 304 --ELMEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE--LVT-SFEDHLL-WHPDCNTNNIYITS--DQDL 372 (474)
Q Consensus 304 --~~~~~l~~-h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~--ll~-tl~gH~~-~~~~~~v~svafSp--Dg~~ 372 (474)
++...+.+ |...|++++|+|++ +|++++ |++|+|||.. |+ ++. .+.+|.. . |+.++|+| ||++
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~-----v~~v~~~~~~~~~~ 311 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYE-----INVVKWLELNGKTI 311 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSC-----EEEEEEC-----CC
T ss_pred eeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccce-----EEEEEEecCCCceE
Confidence 56666665 99999999999877 677777 9999999994 63 443 3468876 4 79999999 7999
Q ss_pred EEEEecCCCccccccCCCCeEEEEeCCC
Q 011970 373 IISYCKAEPEDQWMEGSAGSINVSSILT 400 (474)
Q Consensus 373 LaS~s~~~~~~~~~~s~DgtIklWdi~t 400 (474)
||||+. ||+|+|||+.+
T Consensus 312 las~s~-----------Dg~v~~W~~~~ 328 (330)
T 2hes_X 312 LATGGD-----------DGIVNFWSLEK 328 (330)
T ss_dssp EEEEET-----------TSEEEEEEC--
T ss_pred EEEecC-----------CCcEEEEEecc
Confidence 999987 99999999854
No 41
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=7.1e-43 Score=356.21 Aligned_cols=302 Identities=13% Similarity=0.176 Sum_probs=261.9
Q ss_pred EEEEeeccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccC
Q 011970 92 IEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG 171 (474)
Q Consensus 92 ~~i~~s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G 171 (474)
..+.+.++.||+++.||+|++||..+|+++.++.+ |...|+++.|+ ++.|++++ .| +++++|++.+|
T Consensus 123 ~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~l~s~~----~d------g~i~vwd~~~~ 189 (445)
T 2ovr_B 123 TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMR--DNIIISGS----TD------RTLKVWNAETG 189 (445)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEE--TTEEEEEE----TT------SCEEEEETTTT
T ss_pred EEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEec--CCEEEEEe----CC------CeEEEEECCcC
Confidence 44556699999999999999999999999999997 78899999998 56898876 45 69999999999
Q ss_pred CCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEecCCCC
Q 011970 172 KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSH 249 (474)
Q Consensus 172 ~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~~la~~s~~s~D 249 (474)
++... +. .+...+..++|+ ++.|++|+.|++|++||+.+++++.++. ...|.+++| .+..++++ +.|
T Consensus 190 ~~~~~---~~-~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~---~~d 258 (445)
T 2ovr_B 190 ECIHT---LY-GHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSG---AYD 258 (445)
T ss_dssp EEEEE---EC-CCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEE---ETT
T ss_pred cEEEE---EC-CCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEE---cCC
Confidence 86432 22 234556688885 4689999999999999999999998886 468999999 56677776 447
Q ss_pred ccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEE
Q 011970 250 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFL 329 (474)
Q Consensus 250 ~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~lla 329 (474)
++|++||+++++++.++.+|...+.+++| ++..+++++.|++|++||+++++++..+.+|...+.++.+ ++++|+
T Consensus 259 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 333 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILV 333 (445)
T ss_dssp SCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEE
T ss_pred CEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEE
Confidence 99999999999999999999999999998 5788999999999999999999999999999999988766 567899
Q ss_pred EEc-CCcEEEEeCC-CcEEEEecc---CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 330 TFR-NRTVAVWNFR-GELVTSFED---HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 330 S~s-D~tIklWd~~-G~ll~tl~g---H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
+++ |++|++||++ |+++.++.+ |... |.+++| ++++|++++. ||+|+|||+.+|+++
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----v~~~~~--~~~~l~s~~~-----------dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSA-----VTCLQF--NKNFVITSSD-----------DGTVKLWDLKTGEFI 395 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSC-----EEEEEE--CSSEEEEEET-----------TSEEEEEETTTCCEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCC-----EEEEEE--CCCEEEEEeC-----------CCeEEEEECCCCcee
Confidence 998 9999999994 999999997 5554 788888 4789999987 999999999999999
Q ss_pred EEec-----CCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCc----EEEccC
Q 011970 405 AKIN-----ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGL----VHVWSN 474 (474)
Q Consensus 405 ~tl~-----gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~Dgt----VklWd~ 474 (474)
.++. +|.. .|++++|+|+|..||+|+.||+ |.+||.
T Consensus 396 ~~~~~~~~~~~~~----------------------------------~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 396 RNLVTLESGGSGG----------------------------------VVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp EEEEECTTGGGTC----------------------------------EEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred eeeeccccCCCCc----------------------------------eEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 9993 4543 8999999999999999999998 999984
No 42
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-43 Score=357.45 Aligned_cols=277 Identities=12% Similarity=0.129 Sum_probs=235.2
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCC-----------------CceEEEEEEeeCCCEEEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSP-----------------DEVIRSLFYNKNNDSLITV 147 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~-----------------~~~i~sv~fspdg~~Lis~ 147 (474)
|...|..+.|+ |++||+++ ++++++|+..+|+++..+.+.. ...|++++|+|||+.|+++
T Consensus 63 h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 55566666666 99999987 7899999999999999987532 1249999999999999997
Q ss_pred EeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-C
Q 011970 148 SVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-D 226 (474)
Q Consensus 148 S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~ 226 (474)
+ .| ++++|||+.++++.. .+. +|...+.+++|+ |+|++|++++.|++|+|||+.++++..++. .
T Consensus 142 ~----~d------~~i~iwd~~~~~~~~---~~~-~h~~~v~~~~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 206 (393)
T 1erj_A 142 A----ED------RLIRIWDIENRKIVM---ILQ-GHEQDIYSLDYF-PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE 206 (393)
T ss_dssp E----TT------SCEEEEETTTTEEEE---EEC-CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred c----CC------CeEEEEECCCCcEEE---EEc-cCCCCEEEEEEc-CCCCEEEEecCCCcEEEEECCCCeeEEEEEcC
Confidence 6 55 699999999887633 222 245667799998 799999999999999999999999988886 5
Q ss_pred CcEEEEEEcC-C-ceEEEEecCCCCccEEEEecCCCeEEEEE-------eecCcceeEEEEEecCCCeEEEEeCCCcEEE
Q 011970 227 KHVQEIKISP-G-IMLLIFNRSSSHVPLKILSIEDGTVLKVF-------YHLLHRNKKVDFIEQFNEKLLVKQENENLQI 297 (474)
Q Consensus 227 ~~V~~vafSp-g-~~la~~s~~s~D~tIkLWdi~tG~~L~tl-------~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkI 297 (474)
..|..++|+| + .+++++ +.|++|+|||+++|+++..+ .+|...+.+|+|+ |++..|++++.|++|+|
T Consensus 207 ~~v~~~~~~~~~~~~l~~~---s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAG---SLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT-RDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp SCEEEEEECSTTCCEEEEE---ETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC-TTSSEEEEEETTSEEEE
T ss_pred CCcEEEEEECCCCCEEEEE---cCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC-CCCCEEEEEeCCCEEEE
Confidence 6899999998 4 455554 45899999999999999888 5788899999997 67888999999999999
Q ss_pred EECCC------------CceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeE
Q 011970 298 LDVRN------------AELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNN 363 (474)
Q Consensus 298 WDv~t------------g~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~s 363 (474)
||+++ +.|..++.+|...|.+++|+|++++|+|++ |++|++||.. |+++.++.+|... |.+
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~-----v~~ 357 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS-----VIS 357 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSC-----EEE
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCC-----EEE
Confidence 99986 456677889999999999999999999999 9999999995 9999999999987 789
Q ss_pred EEECC------CCCEEEEEecCCCccccccCCCCeEEEEeCC
Q 011970 364 IYITS------DQDLIISYCKAEPEDQWMEGSAGSINVSSIL 399 (474)
Q Consensus 364 vafSp------Dg~~LaS~s~~~~~~~~~~s~DgtIklWdi~ 399 (474)
++|+| ++++||||+. ||+|||||+.
T Consensus 358 v~~~~~~~~~p~~~~l~sgs~-----------Dg~i~iW~~~ 388 (393)
T 1erj_A 358 VAVANGSSLGPEYNVFATGSG-----------DCKARIWKYK 388 (393)
T ss_dssp EEECSSCTTCTTCEEEEEEET-----------TSEEEEEEEE
T ss_pred EEecCCcCcCCCCCEEEEECC-----------CCcEEECccc
Confidence 99886 7999999987 9999999974
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-43 Score=351.83 Aligned_cols=266 Identities=12% Similarity=0.060 Sum_probs=220.6
Q ss_pred ccEEEEeeCCCeEEeeeccc-------cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEecc
Q 011970 98 RDIVFALAHSGVCAAFSRET-------NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 170 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~t-------g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~ 170 (474)
+++||+++.|++|++|++.+ ++++.+|.+ |...|.+++|+|+|..|+++| .| ++++|||+++
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~~~~~~~l~s~s----~D------~~v~lwd~~~ 107 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-HNHFVSDLALSQENCFAISSS----WD------KTLRLWDLRT 107 (343)
T ss_dssp CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-CSSCEEEEEECSSTTEEEEEE----TT------SEEEEEETTS
T ss_pred CCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-CCCceEEEEECCCCCEEEEEc----CC------CcEEEEECCC
Confidence 78999999999999999864 467788887 778999999999999999976 55 6999999999
Q ss_pred CCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-----CCcEEEEEEcCC--------
Q 011970 171 GKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-----DKHVQEIKISPG-------- 237 (474)
Q Consensus 171 G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-----~~~V~~vafSpg-------- 237 (474)
|++... +. +|...+.+|+|+ |||++|++++.|++|+|||+. +.+...+. ...|.+++|+|.
T Consensus 108 ~~~~~~---~~-~h~~~v~~v~~s-p~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 181 (343)
T 2xzm_R 108 GTTYKR---FV-GHQSEVYSVAFS-PDNRQILSAGAEREIKLWNIL-GECKFSSAEKENHSDWVSCVRYSPIMKSANKVQ 181 (343)
T ss_dssp SCEEEE---EE-CCCSCEEEEEEC-SSTTEEEEEETTSCEEEEESS-SCEEEECCTTTSCSSCEEEEEECCCCCSCSCCC
T ss_pred CcEEEE---Ec-CCCCcEEEEEEC-CCCCEEEEEcCCCEEEEEecc-CCceeeeecccCCCceeeeeeeccccccccccC
Confidence 987432 22 245667799998 799999999999999999997 44444432 457999999985
Q ss_pred ---ceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCC-CceEEeccccC
Q 011970 238 ---IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN-AELMEVSRTEF 313 (474)
Q Consensus 238 ---~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~t-g~~~~~l~~h~ 313 (474)
..++++ +.|++|+||| .+++++.++.+|...+.+++|+ |++.+|++++.|++|+|||+.+ +.+...+. +.
T Consensus 182 ~~~~~l~s~---~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s-~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~ 255 (343)
T 2xzm_R 182 PFAPYFASV---GWDGRLKVWN-TNFQIRYTFKAHESNVNHLSIS-PNGKYIATGGKDKKLLIWDILNLTYPQREFD-AG 255 (343)
T ss_dssp SSCCEEEEE---ETTSEEEEEE-TTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CS
T ss_pred CCCCEEEEE---cCCCEEEEEc-CCCceeEEEcCccccceEEEEC-CCCCEEEEEcCCCeEEEEECCCCcccceeec-CC
Confidence 366665 4589999999 5779999999999999999998 6788899999999999999954 44444442 44
Q ss_pred CceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEE--Eec-----------cCCCCcCCCCeeEEEECCCCCEEEEEecC
Q 011970 314 MTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVT--SFE-----------DHLLWHPDCNTNNIYITSDQDLIISYCKA 379 (474)
Q Consensus 314 ~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~--tl~-----------gH~~~~~~~~v~svafSpDg~~LaS~s~~ 379 (474)
..|.+++|+|+++++++++|++|+|||+. ++++. +++ +|... |++++|+|||++||+|+.
T Consensus 256 ~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~sp~g~~l~sg~~- 329 (343)
T 2xzm_R 256 STINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQ-----CTSLAWNALGKKLFAGFT- 329 (343)
T ss_dssp SCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCC-----EEEEEECSSSCCEEEEET-
T ss_pred CcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCc-----eEEEEECCCCCeEEEecC-
Confidence 56999999999999987779999999994 66543 555 66665 789999999999999987
Q ss_pred CCccccccCCCCeEEEEeCCCCe
Q 011970 380 EPEDQWMEGSAGSINVSSILTGK 402 (474)
Q Consensus 380 ~~~~~~~~s~DgtIklWdi~tG~ 402 (474)
||+|+|||+.+|+
T Consensus 330 ----------Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 330 ----------DGVIRTFSFETSA 342 (343)
T ss_dssp ----------TSEEEEEEEEEEE
T ss_pred ----------CceEEEEEEEccC
Confidence 9999999987764
No 44
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.4e-43 Score=352.44 Aligned_cols=306 Identities=13% Similarity=0.074 Sum_probs=241.5
Q ss_pred eeccccceeeEeecCCCceEEEEEEeeCC-CEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEE
Q 011970 113 FSRETNRRICFLNVSPDEVIRSLFYNKNN-DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFV 191 (474)
Q Consensus 113 W~~~tg~~l~~l~g~~~~~i~sv~fspdg-~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V 191 (474)
|+..+.+.++++.+ |...|.+++|+|+| +.|++++ .| .+++||++..++....+.+. ++...+..+
T Consensus 58 ~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~----~d------g~i~iwd~~~~~~~~~~~~~--~h~~~v~~~ 124 (383)
T 3ei3_B 58 RSLKSYKLHRTASP-FDRRVTSLEWHPTHPTTVAVGS----KG------GDIILWDYDVQNKTSFIQGM--GPGDAITGM 124 (383)
T ss_dssp HHHTTCEEEEEECC-CSSCEEEEEECSSCTTEEEEEE----BT------SCEEEEETTSTTCEEEECCC--STTCBEEEE
T ss_pred ccccccceEEeccC-CCCCEEEEEECCCCCCEEEEEc----CC------CeEEEEeCCCcccceeeecC--CcCCceeEE
Confidence 34455667778886 77899999999999 8999976 44 68999999988864321111 245667799
Q ss_pred EEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC-----CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEE
Q 011970 192 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-----KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (474)
Q Consensus 192 ~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~-----~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~t 265 (474)
+|+|.++++|++++.|++|+|||+.+ .++..+.. ..|.+++|+| +..|+++ +.|++|++||+ +++++.+
T Consensus 125 ~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d~~i~i~d~-~~~~~~~ 199 (383)
T 3ei3_B 125 KFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATG---DSTGRLLLLGL-DGHEIFK 199 (383)
T ss_dssp EEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEE---ETTSEEEEEET-TSCEEEE
T ss_pred EeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEE---CCCCCEEEEEC-CCCEEEE
Confidence 99943889999999999999999985 55555542 5699999998 5555555 45799999999 6899999
Q ss_pred EeecCcceeEEEEEecCCC-eEEEEeCCCcEEEEECCC----CceEEeccccCCceEEEEEcC-CCcEEEEEc-CCcEEE
Q 011970 266 FYHLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRN----AELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTVAV 338 (474)
Q Consensus 266 l~~h~~~v~~V~F~~~~~~-~ll~~~~D~tIkIWDv~t----g~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s-D~tIkl 338 (474)
+.+|...+.+++|+ |++. .+++++.|++|+|||+++ ++++..+ +|...|.+++|+| +|++|++++ |++|+|
T Consensus 200 ~~~h~~~v~~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 200 EKLHKAKVTHAEFN-PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp EECSSSCEEEEEEC-SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred eccCCCcEEEEEEC-CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 99999999999998 5566 788889999999999998 7787776 6999999999999 999999999 999999
Q ss_pred EeCC-CcEEEEeccCCCCcCC--CCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCC
Q 011970 339 WNFR-GELVTSFEDHLLWHPD--CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPK 415 (474)
Q Consensus 339 Wd~~-G~ll~tl~gH~~~~~~--~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~ 415 (474)
||++ ++++.++.+|...... ..+ .+.|+|++.+++.+.. ++.+.+++.|++|+|||+.+|+++.++.+|.. .
T Consensus 278 wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~s--~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~--~ 352 (383)
T 3ei3_B 278 YSSYDWSKPDQIIIHPHRQFQHLTPI-KATWHPMYDLIVAGRY--PDDQLLLNDKRTIDIYDANSGGLVHQLRDPNA--A 352 (383)
T ss_dssp EETTBTTSCSEEEECCBCCCTTSCCC-CCEECSSSSEEEEECB--CCTTTCTTCCCCEEEEETTTCCEEEEECBTTB--C
T ss_pred EECCCCccccccccccccccccccce-EEeccCCCCceEEEec--CCcccccCCCCeEEEEecCCCceeeeecCCCC--C
Confidence 9995 9998888877632110 012 2456666665554432 22222456799999999999999999998642 0
Q ss_pred CccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 416 VDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
..|..++|+|||+.||+|+ |++|+|||.
T Consensus 353 ------------------------------~~~~~~~~s~~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 353 ------------------------------GIISLNKFSPTGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp ------------------------------SCCCEEEECTTSSEEEEEE-TTEEEEEEC
T ss_pred ------------------------------ceEEEEEEecCccEEEEec-CCcEEEEec
Confidence 1677789999999999998 999999984
No 45
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.9e-44 Score=411.24 Aligned_cols=316 Identities=12% Similarity=0.177 Sum_probs=275.1
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
|...|..+.|+ +.++++++.||++++|+..+++++..+.+ |...|.+++|+|+|+.|++++. | ++++
T Consensus 839 ~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~s~s~----d------g~v~ 907 (1249)
T 3sfz_A 839 HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG-HLSWVHGVMFSPDGSSFLTASD----D------QTIR 907 (1249)
T ss_dssp SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEET----T------SCEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC-CccceEEEEECCCCCEEEEEeC----C------CeEE
Confidence 56677777777 99999999999999999999999999997 7789999999999999999773 3 3555
Q ss_pred EeEe----------------------------------------------------------------------------
Q 011970 165 IEYI---------------------------------------------------------------------------- 168 (474)
Q Consensus 165 iw~i---------------------------------------------------------------------------- 168 (474)
+|++
T Consensus 908 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i 987 (1249)
T 3sfz_A 908 VWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKI 987 (1249)
T ss_dssp EEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEE
T ss_pred EEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEE
Confidence 5553
Q ss_pred ---ccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEe
Q 011970 169 ---RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFN 244 (474)
Q Consensus 169 ---~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~~la~~s 244 (474)
.+|+... .+. .|...+..++|+ |||++|++++.|++|++||+.+++++.... ...|.+++|+|++.+++++
T Consensus 988 ~d~~~~~~~~---~~~-~h~~~v~~l~~s-~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~ 1062 (1249)
T 3sfz_A 988 IELPNNRVFS---SGV-GHKKAVRHIQFT-ADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWS 1062 (1249)
T ss_dssp EETTTTSCEE---ECC-CCSSCCCCEEEC-SSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEE
T ss_pred EEcCCCceee---ecc-cCCCceEEEEEC-CCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEE
Confidence 3333211 011 234556789998 799999999999999999999999875443 5789999999999888874
Q ss_pred cCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCC
Q 011970 245 RSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE 324 (474)
Q Consensus 245 ~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspd 324 (474)
.|++|++||+.+|+++.++.+|...+.+++|+ |++..+++++.|++|+|||+.+++++.++.+|...|.+++|+||
T Consensus 1063 ---~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s-~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~d 1138 (1249)
T 3sfz_A 1063 ---FDGTVKVWNVITGRIERDFTCHQGTVLSCAIS-SDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLD 1138 (1249)
T ss_dssp ---SSSEEEEEETTTTCCCEEEECCSSCCCCEEEC-SSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSS
T ss_pred ---CCCcEEEEECCCCceeEEEcccCCcEEEEEEC-CCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCC
Confidence 47899999999999999999999999999998 67888999999999999999999999999999999999999999
Q ss_pred CcEEEEEc-CCcEEEEeCC-CcEEEEe---------ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeE
Q 011970 325 NQLFLTFR-NRTVAVWNFR-GELVTSF---------EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSI 393 (474)
Q Consensus 325 g~llaS~s-D~tIklWd~~-G~ll~tl---------~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtI 393 (474)
|++|++++ |++|+|||+. |+++.++ .+|..+ |.+++|||||++|+++ +|+|
T Consensus 1139 g~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~l~fs~dg~~l~s~-------------~g~v 1200 (1249)
T 3sfz_A 1139 GILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGW-----VTDVCFSPDSKTLVSA-------------GGYL 1200 (1249)
T ss_dssp SSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSC-----CCEEEECTTSSCEEEE-------------SSSE
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCce-----EEEEEECCCCCEEEEC-------------CCeE
Confidence 99999999 9999999995 9988776 678876 6899999999999986 5899
Q ss_pred EEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 394 NVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 394 klWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
++||+.+|+++.++.+|.. .|++++|+|||+.|++++.||+|++|+
T Consensus 1201 ~vwd~~~g~~~~~~~~~~~----------------------------------~i~~~~~s~dg~~l~~~~~dg~v~vw~ 1246 (1249)
T 3sfz_A 1201 KWWNVATGDSSQTFYTNGT----------------------------------NLKKIHVSPDFRTYVTVDNLGILYILQ 1246 (1249)
T ss_dssp EEBCSSSCBCCCCCCCSSC----------------------------------CCCCCEECSSSCCEEEECTTCCEEEEC
T ss_pred EEEECCCCceeeeeeccCC----------------------------------cccEEEECCCCCEEEEecCCcEEEEEe
Confidence 9999999999999999985 789999999999999999999999998
Q ss_pred C
Q 011970 474 N 474 (474)
Q Consensus 474 ~ 474 (474)
+
T Consensus 1247 l 1247 (1249)
T 3sfz_A 1247 V 1247 (1249)
T ss_dssp C
T ss_pred e
Confidence 5
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3e-42 Score=334.22 Aligned_cols=278 Identities=13% Similarity=0.149 Sum_probs=236.5
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
|..+|..+.|+ +++||+++.||++++|+..+++++..+.+ |...|.+++|+|+|+.|++++ .| .+++
T Consensus 22 h~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~----~d------~~i~ 90 (312)
T 4ery_A 22 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSAS----DD------KTLK 90 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE----TT------SEEE
T ss_pred cCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEEEC----CC------CEEE
Confidence 44455555555 89999999999999999999999999997 778899999999999999976 55 6999
Q ss_pred EeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCC-ceEE
Q 011970 165 IEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPG-IMLL 241 (474)
Q Consensus 165 iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg-~~la 241 (474)
||++.++++... +. .+...+..++|+ |+|++|++|+.|++|++||+.+++++.++. ...|.+++|+|+ ..++
T Consensus 91 vwd~~~~~~~~~---~~-~~~~~v~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 91 IWDVSSGKCLKT---LK-GHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp EEETTTCCEEEE---EE-CCSSCEEEEEEC-SSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEECCCCcEEEE---Ec-CCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 999999987432 22 245567789998 799999999999999999999999999886 457999999984 5555
Q ss_pred EEecCCCCccEEEEecCCCeEEEEEe-ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceE---
Q 011970 242 IFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPS--- 317 (474)
Q Consensus 242 ~~s~~s~D~tIkLWdi~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~--- 317 (474)
++ +.|++|++||+++++++.++. .+...+..++|+ |++..+++++.|++|+|||+++++++..+.+|...+.
T Consensus 166 ~~---~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 241 (312)
T 4ery_A 166 SS---SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS-PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 241 (312)
T ss_dssp EE---ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEEC-TTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCC
T ss_pred EE---eCCCcEEEEECCCCceeeEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEE
Confidence 55 458999999999999999886 456678899997 6788899999999999999999999999888876443
Q ss_pred EEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEE
Q 011970 318 AFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINV 395 (474)
Q Consensus 318 sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIkl 395 (474)
...+.+++++|++++ |++|++||++ +++++++++|... |.+++|+|++++|++++. +.|++|+|
T Consensus 242 ~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~p~~~~l~s~~~---------~~d~~i~~ 307 (312)
T 4ery_A 242 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV-----VISTACHPTENIIASAAL---------ENDKTIKL 307 (312)
T ss_dssp EEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSC-----EEEEEECSSSSEEEEEEC---------TTTCCEEE
T ss_pred EEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCc-----EEEEeecCcCCceEEEEc---------cCCccEEE
Confidence 223448899999999 9999999995 9999999999987 789999999999999873 34999999
Q ss_pred EeC
Q 011970 396 SSI 398 (474)
Q Consensus 396 Wdi 398 (474)
|+.
T Consensus 308 W~~ 310 (312)
T 4ery_A 308 WKS 310 (312)
T ss_dssp EEC
T ss_pred ecC
Confidence 985
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.6e-43 Score=350.73 Aligned_cols=312 Identities=13% Similarity=0.111 Sum_probs=254.6
Q ss_pred EEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEecc
Q 011970 93 EIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 170 (474)
Q Consensus 93 ~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~ 170 (474)
.+.|+ ++.||+++.||++++|+..+++...++.+ + +.+...+|+|+|+.|++++ .| ..++||++..
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~----~d------g~i~iwd~~~ 128 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKR-A-DYTAVDTAKLQMRRFILGT----TE------GDIKVLDSNF 128 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCS-C-CEEEEEEECSSSCEEEEEE----TT------SCEEEECTTS
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccceeeEEec-C-CceEEEEEecCCCEEEEEE----CC------CCEEEEeCCC
Confidence 45555 99999999999999999999999888875 4 6677778999999999976 45 6899999988
Q ss_pred CCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEecCC
Q 011970 171 GKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSS 247 (474)
Q Consensus 171 G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~s 247 (474)
+++.. .+. .|...+..++|+ |+|++|++++.|++|+|||+.+++++.++. ...|.+++|+| +.+|+++ +
T Consensus 129 ~~~~~---~~~-~h~~~v~~~~~~-~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~---~ 200 (420)
T 3vl1_A 129 NLQRE---IDQ-AHVSEITKLKFF-PSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSA---S 200 (420)
T ss_dssp CEEEE---ETT-SSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEE---E
T ss_pred cceee---ecc-cccCccEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEE---c
Confidence 87632 222 345677799998 799999999999999999999999888875 46899999998 5556655 4
Q ss_pred CCccEEEEecCCCeEEEEEee---cCcceeEEEEEe--------------------cCCCeEEEEeCCCcEEEEECCCCc
Q 011970 248 SHVPLKILSIEDGTVLKVFYH---LLHRNKKVDFIE--------------------QFNEKLLVKQENENLQILDVRNAE 304 (474)
Q Consensus 248 ~D~tIkLWdi~tG~~L~tl~~---h~~~v~~V~F~~--------------------~~~~~ll~~~~D~tIkIWDv~tg~ 304 (474)
.|++|++||+++|+++.++.. |...+..++|.+ |++..+++++.|++|+|||+++++
T Consensus 201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 201 LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC
T ss_pred CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc
Confidence 589999999999999999985 455667777643 456678888999999999999998
Q ss_pred eEEe-ccccCCceEEEEEcCCCc-EEEEEc-CCcEEEEeCC-Cc-EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecC
Q 011970 305 LMEV-SRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-GE-LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 379 (474)
Q Consensus 305 ~~~~-l~~h~~~v~sv~Fspdg~-llaS~s-D~tIklWd~~-G~-ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~ 379 (474)
.+.. ..+|...|.+++|+|+++ +|++++ |++|++||++ ++ ++.++.+|... .|+.++ +|+|++|++++.
T Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~----~v~~~~-~~~~~~l~s~~~- 354 (420)
T 3vl1_A 281 QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT----PINNVY-FAAGALFVSSGF- 354 (420)
T ss_dssp EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS----CEEEEE-EETTEEEEEETT-
T ss_pred eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC----CceEEE-eCCCCEEEEecC-
Confidence 7765 456889999999999999 999999 9999999995 65 48888885543 267775 468899999876
Q ss_pred CCccccccCCCCeEEEEeCCCCe---------EEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEE
Q 011970 380 EPEDQWMEGSAGSINVSSILTGK---------CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITS 450 (474)
Q Consensus 380 ~~~~~~~~s~DgtIklWdi~tG~---------cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~s 450 (474)
|++|+|||+.+++ ....+.+|.. .|.+
T Consensus 355 ----------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~v~~ 390 (420)
T 3vl1_A 355 ----------DTSIKLDIISDPESERPAIEFETPTFLVSNDD----------------------------------AVSQ 390 (420)
T ss_dssp ----------TEEEEEEEECCTTCCSCEECTTSCEEECCSSC----------------------------------CCCE
T ss_pred ----------CccEEEEeccCCCCCccceeccCccEEccCCc----------------------------------ceEE
Confidence 9999999987642 2223334432 8999
Q ss_pred EEEcCCCC---EEEEEcCCCcEEEccC
Q 011970 451 LFYDEERN---EIYTGNRHGLVHVWSN 474 (474)
Q Consensus 451 lafSpDg~---~LaSgs~DgtVklWd~ 474 (474)
++|+|||+ .|++.+.+|.+++|++
T Consensus 391 ~~~s~~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 391 FCYVSDDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp EEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred EEEccCCCCcceEEEEcCCceEEEEec
Confidence 99999999 7777888999999974
No 48
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-42 Score=334.18 Aligned_cols=298 Identities=14% Similarity=0.148 Sum_probs=243.8
Q ss_pred eeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCe
Q 011970 120 RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGK 199 (474)
Q Consensus 120 ~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk 199 (474)
+...|.+ |.+.|.+++|+|+|+.|++++ .| ..++||++.+|++... +. .+...+.+++|+ |+|+
T Consensus 24 ~~~~l~~-h~~~v~~~~~s~~~~~l~~~~----~d------g~i~vwd~~~~~~~~~---~~-~h~~~v~~~~~~-~~~~ 87 (369)
T 3zwl_B 24 KAIKLTG-HERPLTQVKYNKEGDLLFSCS----KD------SSASVWYSLNGERLGT---LD-GHTGTIWSIDVD-CFTK 87 (369)
T ss_dssp EEEEEEC-CSSCEEEEEECTTSCEEEEEE----SS------SCEEEEETTTCCEEEE---EC-CCSSCEEEEEEC-TTSS
T ss_pred ccEEEEE-eeceEEEEEEcCCCCEEEEEe----CC------CEEEEEeCCCchhhhh---hh-hcCCcEEEEEEc-CCCC
Confidence 3445776 889999999999999999976 44 5899999999987432 22 245567799998 7999
Q ss_pred EEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcC-CceEEEEecC--CCCccEEEEecCCCe-----------EEE
Q 011970 200 VLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISP-GIMLLIFNRS--SSHVPLKILSIEDGT-----------VLK 264 (474)
Q Consensus 200 ~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSp-g~~la~~s~~--s~D~tIkLWdi~tG~-----------~L~ 264 (474)
+|++++.|++|+|||+.+++++.++. ...|.+++|+| +..++++... ..++.|++||+.+++ .+.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 99999999999999999999998886 56899999998 5555554321 122899999998874 344
Q ss_pred EEeecCc--ceeEEEEEecCCCeEEEEeCCCcEEEEECCC-CceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEe
Q 011970 265 VFYHLLH--RNKKVDFIEQFNEKLLVKQENENLQILDVRN-AELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 340 (474)
Q Consensus 265 tl~~h~~--~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~t-g~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd 340 (474)
.+..|.+ .+..++|+ |++..+++++.|++|++||+++ ++++..+..|...|.+++|+|++++|++++ |++|++||
T Consensus 168 ~~~~~~~~~~~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d 246 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWS-TKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVD 246 (369)
T ss_dssp EEECCTTCCCEEEEEEC-GGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eccCCcCccceeEEEEc-CCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEE
Confidence 5555655 88999997 5678888899999999999999 788899999999999999999999999999 99999999
Q ss_pred CC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccc---cccCCCCeEEEEeCCCCeEEEEecCCCCCCCC
Q 011970 341 FR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQ---WMEGSAGSINVSSILTGKCLAKINATNCSPKV 416 (474)
Q Consensus 341 ~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~---~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~ 416 (474)
++ ++++..+. |... +..++|+|+|++|++++..+.... ........|++||+.+++++.++.+|..
T Consensus 247 ~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---- 316 (369)
T 3zwl_B 247 VSTLQVLKKYE-TDCP-----LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG---- 316 (369)
T ss_dssp TTTCCEEEEEE-CSSC-----EEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS----
T ss_pred CCCCceeeeec-CCCC-----ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC----
Confidence 95 99999998 3333 789999999999999876110000 0000011899999999999999999986
Q ss_pred ccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 417 DDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++++|+|||+.||||+.||+|+||+.
T Consensus 317 ------------------------------~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 317 ------------------------------PLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp ------------------------------CEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred ------------------------------cEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 8999999999999999999999999973
No 49
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.5e-42 Score=350.95 Aligned_cols=310 Identities=14% Similarity=0.164 Sum_probs=256.0
Q ss_pred cccc-EEEEEeeccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEE
Q 011970 87 KRTK-VIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (474)
Q Consensus 87 ~~~~-V~~i~~s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~i 165 (474)
|..+ +..+.+.+++||+++.||+|++||+.+++++.++.+ |...|.+++|+|++ .|++++ .| ++++|
T Consensus 120 h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~~-~l~s~s----~d------g~i~v 187 (464)
T 3v7d_B 120 HMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHGG-ILVSGS----TD------RTVRV 187 (464)
T ss_dssp CSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSTT-EEEEEE----TT------SCEEE
T ss_pred CCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeC-CCcCEEEEEEcCCC-EEEEEe----CC------CCEEE
Confidence 4444 355666799999999999999999999999999997 78999999999999 888866 45 69999
Q ss_pred eEeccCCCCCccceeeeccccCceEEEEeC-CCCeEEEEecCCCcEEEeecCCCeE-----------------------E
Q 011970 166 EYIRRGKPDSGFALFESESLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTM-----------------------L 221 (474)
Q Consensus 166 w~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~-~nGk~LaS~s~D~tiKlWdl~tg~~-----------------------l 221 (474)
|++.+|++.. .+. .|...+..++|++ +++++|++++.|++|++||+.+++. +
T Consensus 188 wd~~~~~~~~---~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (464)
T 3v7d_B 188 WDIKKGCCTH---VFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 263 (464)
T ss_dssp EETTTTEEEE---EEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEE
T ss_pred EECCCCcEEE---EEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEE
Confidence 9999998643 222 2455677888874 5889999999999999999998763 3
Q ss_pred EEEcC--CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEE
Q 011970 222 YSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILD 299 (474)
Q Consensus 222 ~tl~~--~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWD 299 (474)
.++.+ ..|.++... +..++++ +.|++|++||+++++++.++.+|...+.+++|+ |++..+++++.|++|+|||
T Consensus 264 ~~~~~~~~~v~~~~~~-~~~l~~~---~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~sg~~dg~i~vwd 338 (464)
T 3v7d_B 264 GVLRGHMASVRTVSGH-GNIVVSG---SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD-HERKRCISASMDTTIRIWD 338 (464)
T ss_dssp EEECCCSSCEEEEEEE-TTEEEEE---ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-TTTTEEEEEETTSCEEEEE
T ss_pred EEccCccceEEEEcCC-CCEEEEE---eCCCeEEEEECCCCcEEEEecCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEE
Confidence 34443 456666332 5666766 457999999999999999999999999999998 5788999999999999999
Q ss_pred CCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEe
Q 011970 300 VRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 377 (474)
Q Consensus 300 v~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s 377 (474)
+++++++.++.+|...|.+++|+ +++|++++ |++|++||++ ++....+. |... +..++|+|+|++|++++
T Consensus 339 ~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 339 LENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNL-----SAITTFYVSDNILVSGS 410 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTC-----CCEEEEEECSSEEEEEE
T ss_pred CCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCC-----ccEEEEEeCCCEEEEec
Confidence 99999999999999999999997 57899988 9999999995 77766664 3332 56799999999999975
Q ss_pred cCCCccccccCCCCeEEEEeCCCCeEEEE-ecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCC
Q 011970 378 KAEPEDQWMEGSAGSINVSSILTGKCLAK-INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEE 456 (474)
Q Consensus 378 ~~~~~~~~~~s~DgtIklWdi~tG~cl~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpD 456 (474)
|++|+|||+.+|+++++ +.+|.. .|++|+|+ +
T Consensus 411 ------------dg~i~iwd~~~g~~~~~~~~~~~~----------------------------------~v~~v~~~-~ 443 (464)
T 3v7d_B 411 ------------ENQFNIYNLRSGKLVHANILKDAD----------------------------------QIWSVNFK-G 443 (464)
T ss_dssp ------------TTEEEEEETTTCCEEESCTTTTCS----------------------------------EEEEEEEE-T
T ss_pred ------------CCeEEEEECCCCcEEehhhccCCC----------------------------------cEEEEEec-C
Confidence 89999999999999986 666664 89999998 4
Q ss_pred CCEEEEEcCCCcEEEc
Q 011970 457 RNEIYTGNRHGLVHVW 472 (474)
Q Consensus 457 g~~LaSgs~DgtVklW 472 (474)
+..+++++.||.+.+|
T Consensus 444 ~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 444 KTLVAAVEKDGQSFLE 459 (464)
T ss_dssp TEEEEEEEETTEEEEE
T ss_pred CEEEEEEEeCCeEEEE
Confidence 4566677778876554
No 50
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.6e-42 Score=334.96 Aligned_cols=279 Identities=9% Similarity=0.100 Sum_probs=226.6
Q ss_pred ccccEEEEEee---ccEEEEeeCCCeEEeeeccccc-----eeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccce
Q 011970 87 KRTKVIEIVAA---RDIVFALAHSGVCAAFSRETNR-----RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSL 158 (474)
Q Consensus 87 ~~~~V~~i~~s---~~~las~s~dgtiklW~~~tg~-----~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~L 158 (474)
|...|.+|+|+ +++|||+|.||+|++||+.+++ ++++|.+ |...|.+++|+|||+.|++++ .|
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h~~~V~~~~~s~dg~~l~s~~----~d---- 107 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-HSHFVSDVVISSDGQFALSGS----WD---- 107 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-CSSCEEEEEECTTSSEEEEEE----TT----
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-CCCCEEEEEECCCCCEEEEEc----cc----
Confidence 44455555555 5799999999999999987654 6778886 889999999999999999976 45
Q ss_pred eeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE-c--CCcEEEEEEc
Q 011970 159 KCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-S--DKHVQEIKIS 235 (474)
Q Consensus 159 k~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl-~--~~~V~~vafS 235 (474)
..+++|+...+.... .+. .+...+..+.|+ +++++|++++.|+.+++||+......... . ...|..++|+
T Consensus 108 --~~i~~~~~~~~~~~~---~~~-~~~~~~~~~~~~-~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~ 180 (340)
T 4aow_A 108 --GTLRLWDLTTGTTTR---RFV-GHTKDVLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFS 180 (340)
T ss_dssp --SEEEEEETTTTEEEE---EEE-CCSSCEEEEEEC-TTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEEC
T ss_pred --ccceEEeecccceee---eec-CCCCceeEEEEe-ecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEc
Confidence 589999987766522 111 123344467786 79999999999999999998776544332 2 4689999999
Q ss_pred CC---ceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecccc
Q 011970 236 PG---IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE 312 (474)
Q Consensus 236 pg---~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h 312 (474)
++ ..++++ +.|++|++||+++++++.++.+|...|.+|+|+ |++..|++++.|++|+|||+++++++..+.++
T Consensus 181 ~~~~~~~~~s~---~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~ 256 (340)
T 4aow_A 181 PNSSNPIIVSC---GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS-PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 256 (340)
T ss_dssp SCSSSCEEEEE---ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEEECS
T ss_pred cCCCCcEEEEE---cCCCEEEEEECCCCceeeEecCCCCcEEEEEEC-CCCCEEEEEeCCCeEEEEEeccCceeeeecCC
Confidence 63 334444 558999999999999999999999999999997 67888888999999999999999999888766
Q ss_pred CCceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEEEec---------cCCCCcCCCCeeEEEECCCCCEEEEEecCCCc
Q 011970 313 FMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFE---------DHLLWHPDCNTNNIYITSDQDLIISYCKAEPE 382 (474)
Q Consensus 313 ~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~tl~---------gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~ 382 (474)
..+.+++|+|++.+++++.|++|+|||++ +.++.++. +|... |++++|+|||++||||+.
T Consensus 257 -~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~s~dg~~l~sgs~---- 326 (340)
T 4aow_A 257 -DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ-----CTSLAWSADGQTLFAGYT---- 326 (340)
T ss_dssp -SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCC-----EEEEEECTTSSEEEEEET----
T ss_pred -ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCC-----EEEEEECCCCCEEEEEeC----
Confidence 47999999999998877779999999996 77777665 45554 799999999999999987
Q ss_pred cccccCCCCeEEEEeCCCCe
Q 011970 383 DQWMEGSAGSINVSSILTGK 402 (474)
Q Consensus 383 ~~~~~s~DgtIklWdi~tG~ 402 (474)
||+|+|||+.||+
T Consensus 327 -------Dg~v~iW~~~tGt 339 (340)
T 4aow_A 327 -------DNLVRVWQVTIGT 339 (340)
T ss_dssp -------TSCEEEEEEEC--
T ss_pred -------CCEEEEEeCCCcC
Confidence 9999999999985
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.2e-42 Score=374.73 Aligned_cols=304 Identities=12% Similarity=0.161 Sum_probs=240.7
Q ss_pred eEeecCCCceEEEEEEeeCC-CEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceee-eccccCceEEEEeCCCCe
Q 011970 122 CFLNVSPDEVIRSLFYNKNN-DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGK 199 (474)
Q Consensus 122 ~~l~g~~~~~i~sv~fspdg-~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~-~~~~~~~~~V~Fs~~nGk 199 (474)
..|++ |.+.|++|+|+|++ +.|+|+| .| ++++||++..++...+..... .+|...+..|+|+ |||+
T Consensus 376 ~~l~~-H~~~V~~v~~~~~~~~~l~s~s----~D------~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s-~~g~ 443 (694)
T 3dm0_A 376 GTMRA-HTDMVTAIATPIDNADIIVSAS----RD------KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS-SDGQ 443 (694)
T ss_dssp EEEEC-CSSCEEEEECCTTCCSEEEEEE----TT------SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEEC-TTSS
T ss_pred hhccc-CCceeEEEEecCCCCCEEEEEe----CC------CcEEEEEccCCCcccccccceecCCCCcEEEEEEC-CCCC
Confidence 46776 88999999999985 6888876 55 699999997655322211111 1356678899998 7999
Q ss_pred EEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEE----eecCcc
Q 011970 200 VLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVF----YHLLHR 272 (474)
Q Consensus 200 ~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl----~~h~~~ 272 (474)
+|++|+.|++|||||+.+++++.++. ...|.+|+||| +..|+++ +.|++|+|||+.. .+..++ .+|...
T Consensus 444 ~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~---s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~ 519 (694)
T 3dm0_A 444 FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSA---SRDRTIKLWNTLG-ECKYTISEGGEGHRDW 519 (694)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEE---ETTSCEEEECTTS-CEEEEECSSTTSCSSC
T ss_pred EEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEE---eCCCEEEEEECCC-CcceeeccCCCCCCCc
Confidence 99999999999999999999998885 46799999998 5566665 4589999999865 444444 357788
Q ss_pred eeEEEEEecCC-CeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEe
Q 011970 273 NKKVDFIEQFN-EKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF 349 (474)
Q Consensus 273 v~~V~F~~~~~-~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl 349 (474)
+.+++|++... ..+++++.|++|+|||++++++..++.+|...|++++|+|+|++|+|++ |++|+|||+. |+++.++
T Consensus 520 v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 520 VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred EEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 99999985321 4678889999999999999999999999999999999999999999999 9999999995 9999998
Q ss_pred ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccc
Q 011970 350 EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSK 429 (474)
Q Consensus 350 ~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~ 429 (474)
+.|.. |.+++|+||+.+|++++ |+.|+|||+.+++++.++..|...... .+. ..+
T Consensus 600 ~~~~~------v~~~~~sp~~~~l~~~~------------~~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~---~~~--- 654 (694)
T 3dm0_A 600 EANSV------IHALCFSPNRYWLCAAT------------EHGIKIWDLESKSIVEDLKVDLKAEAE-KAD---NSG--- 654 (694)
T ss_dssp BCSSC------EEEEEECSSSSEEEEEE------------TTEEEEEETTTTEEEEEECCCCC-----------------
T ss_pred cCCCc------EEEEEEcCCCcEEEEEc------------CCCEEEEECCCCCChhhhccccccccc-ccc---ccc---
Confidence 87643 78999999999999875 778999999999999999876530000 000 000
Q ss_pred cccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 430 KLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 430 ~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.....+..-.|++|+|||||+.|+||+.||+|+||++
T Consensus 655 --------~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 655 --------PAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp --------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred --------cccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 0000112226899999999999999999999999985
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.6e-43 Score=339.87 Aligned_cols=288 Identities=12% Similarity=0.177 Sum_probs=237.4
Q ss_pred eEeecCCCceEEEEEEeeC---CC-EEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeee-ccccCceEEEEeCC
Q 011970 122 CFLNVSPDEVIRSLFYNKN---ND-SLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES-ESLKWPGFVEFDDV 196 (474)
Q Consensus 122 ~~l~g~~~~~i~sv~fspd---g~-~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~~ 196 (474)
..+..+|.+.|.+|+|+|+ ++ .+++++ +++ .++||++.+++....+..+.. .+...+..++|+ |
T Consensus 11 ~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~---~~~-------~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~ 79 (366)
T 3k26_A 11 NSLKEDHNQPLFGVQFNWHSKEGDPLVFATV---GSN-------RVTLYECHSQGEIRLLQSYVDADADENFYTCAWT-Y 79 (366)
T ss_dssp EEEECTTCSCEEEEEECTTCCTTSCEEEEEE---ETT-------EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEE-E
T ss_pred EEeecCCCCceEEEEEecccCCCCceEEEEC---CCC-------EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEec-c
Confidence 3455468899999999984 55 333322 243 799999998876443332322 133457789998 6
Q ss_pred C----CeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-Cc-eEEEEecCCCCccEEEEecCCCeEEEEE--
Q 011970 197 N----GKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GI-MLLIFNRSSSHVPLKILSIEDGTVLKVF-- 266 (474)
Q Consensus 197 n----Gk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~-~la~~s~~s~D~tIkLWdi~tG~~L~tl-- 266 (474)
+ |++|++|+.|++|+|||+.+++++.++. ...|.+++|+| ++ .|+++ +.|++|+|||+++++++..+
T Consensus 80 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~ 156 (366)
T 3k26_A 80 DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSV---SKDHALRLWNIQTDTLVAIFGG 156 (366)
T ss_dssp CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEE---ETTSCEEEEETTTTEEEEEECS
T ss_pred CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEE---eCCCeEEEEEeecCeEEEEecc
Confidence 7 7899999999999999999999998886 46899999998 54 55554 45899999999999999999
Q ss_pred -eecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc----------------------------cCCceE
Q 011970 267 -YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT----------------------------EFMTPS 317 (474)
Q Consensus 267 -~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~----------------------------h~~~v~ 317 (474)
.+|...+..++|+ |++..|++++.|++|++||+++++++..+.. |...|.
T Consensus 157 ~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 235 (366)
T 3k26_A 157 VEGHRDEVLSADYD-LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVD 235 (366)
T ss_dssp TTSCSSCEEEEEEC-TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCC
T ss_pred cccccCceeEEEEC-CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEE
Confidence 6888999999998 5788899999999999999999887654443 999999
Q ss_pred EEEEcCCCcEEEEEc-CCcEEEEeCC-Cc--------------EEEEeccCCCCcCCCCeeEEEECCC--CCEEEEEecC
Q 011970 318 AFIFLYENQLFLTFR-NRTVAVWNFR-GE--------------LVTSFEDHLLWHPDCNTNNIYITSD--QDLIISYCKA 379 (474)
Q Consensus 318 sv~Fspdg~llaS~s-D~tIklWd~~-G~--------------ll~tl~gH~~~~~~~~v~svafSpD--g~~LaS~s~~ 379 (474)
+++|+ +++|++++ |++|++||+. ++ ++.++.+|... |+.++|+|| |++|++++.
T Consensus 236 ~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~~~l~~~~~- 307 (366)
T 3k26_A 236 CVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD-----IWYMRFSMDFWQKMLALGNQ- 307 (366)
T ss_dssp EEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC-----SSCCCCEECTTSSEEEEECT-
T ss_pred EEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc-----EEEEEEcCCCCCcEEEEEec-
Confidence 99999 77999998 9999999984 54 48899999886 688999999 999999876
Q ss_pred CCccccccCCCCeEEEEeCCCCeE----EEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcC
Q 011970 380 EPEDQWMEGSAGSINVSSILTGKC----LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE 455 (474)
Q Consensus 380 ~~~~~~~~s~DgtIklWdi~tG~c----l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSp 455 (474)
||+|+|||+.++++ +.++.+|.. ...|++|+|+|
T Consensus 308 ----------dg~i~vwd~~~~~~~~~~~~~~~~~~~--------------------------------~~~v~~~~~s~ 345 (366)
T 3k26_A 308 ----------VGKLYVWDLEVEDPHKAKCTTLTHHKC--------------------------------GAAIRQTSFSR 345 (366)
T ss_dssp ----------TSCEEEEECCSSSGGGCEEEEECCTTC--------------------------------CSCEEEEEECT
T ss_pred ----------CCcEEEEECCCCCCccccceEEccccc--------------------------------CCceEEEEeCC
Confidence 99999999999874 458888841 01899999999
Q ss_pred CCCEEEEEcCCCcEEEccC
Q 011970 456 ERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 456 Dg~~LaSgs~DgtVklWd~ 474 (474)
||+.|++|+.||+|++||.
T Consensus 346 ~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 346 DSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp TSSEEEEEETTSEEEEEEC
T ss_pred CCCeEEEEeCCCEEEEEEe
Confidence 9999999999999999984
No 53
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-41 Score=321.92 Aligned_cols=278 Identities=13% Similarity=0.196 Sum_probs=239.8
Q ss_pred ceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCC
Q 011970 119 RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNG 198 (474)
Q Consensus 119 ~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nG 198 (474)
+.+.+|.+ |.+.|.+++| |+|+.|++++ .| ..++||++..+++.. .+. .+...+..++|+ |+|
T Consensus 9 ~~~~~l~~-h~~~v~~~~~-~~~~~l~s~~----~d------g~v~vw~~~~~~~~~---~~~-~~~~~v~~~~~~-~~~ 71 (313)
T 3odt_A 9 QLSATLKG-HDQDVRDVVA-VDDSKVASVS----RD------GTVRLWSKDDQWLGT---VVY-TGQGFLNSVCYD-SEK 71 (313)
T ss_dssp EEEEEECC-CSSCEEEEEE-EETTEEEEEE----TT------SEEEEEEESSSEEEE---EEE-ECSSCEEEEEEE-TTT
T ss_pred HHHHHhhC-CCCCcEEEEe-cCCCEEEEEE----cC------CcEEEEECCCCEEEE---Eee-cCCccEEEEEEC-CCC
Confidence 77888987 8899999999 9999999976 45 699999998877533 222 234567799998 799
Q ss_pred eEEEEecCCCcEEEeecCCC---eEEEEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcce
Q 011970 199 KVLTYSAQDSIYKVFDLKNY---TMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN 273 (474)
Q Consensus 199 k~LaS~s~D~tiKlWdl~tg---~~l~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v 273 (474)
++|++++.|++|++||+.+. +++.++. ...|.+++|+ +..++++ +.|++|++|| .++.+..+..|...+
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~---~~d~~i~~~d--~~~~~~~~~~~~~~v 145 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ-DGVVISG---SWDKTAKVWK--EGSLVYNLQAHNASV 145 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE-TTEEEEE---ETTSEEEEEE--TTEEEEEEECCSSCE
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec-CCEEEEE---eCCCCEEEEc--CCcEEEecccCCCce
Confidence 99999999999999998754 5666665 4689999995 5567766 4479999999 789999999999999
Q ss_pred eEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc-cCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEec
Q 011970 274 KKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFE 350 (474)
Q Consensus 274 ~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~-h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~ 350 (474)
..+.|.++++..+++++.|++|++|| .++++..+.. |...+.+++|+|+++ +++++ |++|++||++ ++++.++.
T Consensus 146 ~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 146 WDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh
Confidence 99999987889999999999999999 5667777776 999999999999999 66777 9999999995 99999999
Q ss_pred cCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccc
Q 011970 351 DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKK 430 (474)
Q Consensus 351 gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~ 430 (474)
+|... |.+++|+|||+ |++++. ||+|+|||+.+++++.++.+|..
T Consensus 223 ~~~~~-----i~~~~~~~~~~-l~~~~~-----------dg~v~iwd~~~~~~~~~~~~~~~------------------ 267 (313)
T 3odt_A 223 GHESF-----VYCIKLLPNGD-IVSCGE-----------DRTVRIWSKENGSLKQVITLPAI------------------ 267 (313)
T ss_dssp CCSSC-----EEEEEECTTSC-EEEEET-----------TSEEEEECTTTCCEEEEEECSSS------------------
T ss_pred cCCce-----EEEEEEecCCC-EEEEec-----------CCEEEEEECCCCceeEEEeccCc------------------
Confidence 99887 79999999995 777776 99999999999999999999985
Q ss_pred ccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 431 LNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 431 ~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++++|+|||+ |++|+.||+|++||.
T Consensus 268 ----------------~i~~~~~~~~~~-~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 268 ----------------SIWSVDCMSNGD-IIVGSSDNLVRIFSQ 294 (313)
T ss_dssp ----------------CEEEEEECTTSC-EEEEETTSCEEEEES
T ss_pred ----------------eEEEEEEccCCC-EEEEeCCCcEEEEeC
Confidence 899999999999 667999999999984
No 54
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.7e-42 Score=355.81 Aligned_cols=345 Identities=12% Similarity=0.058 Sum_probs=275.7
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeecccc----ceeeEeecCCCce-EEEEEEee--CCCEEEEEEeecCCCccc
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETN----RRICFLNVSPDEV-IRSLFYNK--NNDSLITVSVYASDNFSS 157 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg----~~l~~l~g~~~~~-i~sv~fsp--dg~~Lis~S~~~s~d~s~ 157 (474)
++..|..+.|+ +++||+++ ++.+++|+++++ +++..+.+ |.+. |.+++|+| ||+.|++++ .|
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~~l~s~~----~d--- 87 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIKGSQYLCSGD----ES--- 87 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSSTTCCEEEEEE----TT---
T ss_pred ccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEec-CCCceEEEEEECcCCCCCEEEEec----CC---
Confidence 45566666676 88999998 899999999999 99999997 7788 99999999 999999976 45
Q ss_pred eeeeEEEEeEeccC--------CCCCccceeeeccccCceEEEEeCCCCeEEEEecCC----CcEEEeecCCCeEEEEEc
Q 011970 158 LKCRSTKIEYIRRG--------KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKNYTMLYSIS 225 (474)
Q Consensus 158 Lk~~~~~iw~i~~G--------~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D----~tiKlWdl~tg~~l~tl~ 225 (474)
.+++||++.+| ++.. .+. .+...+..++|+ |||++|++++.| +.|++|| +++++.++.
T Consensus 88 ---g~v~vw~~~~~~~~~~~~~~~~~---~~~-~~~~~v~~~~~s-~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~ 157 (615)
T 1pgu_A 88 ---GKVIVWGWTFDKESNSVEVNVKS---EFQ-VLAGPISDISWD-FEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVS 157 (615)
T ss_dssp ---SEEEEEEEEEEGGGTEEEEEEEE---EEE-CCSSCEEEEEEC-TTSSEEEEEECCSSCSEEEEETT--TCCEEEECC
T ss_pred ---CEEEEEeCCCCcccccccccccc---hhh-cccccEEEEEEe-CCCCEEEEeccCCCCccEEEEEE--CCCcceeee
Confidence 68999999766 2211 122 134567789998 799999999988 6899998 677888776
Q ss_pred --CCcEEEEEEcCCc--eEEEEecCCCCccEEEEecCCCeEEEEEeecCc---ceeEEEEEecC-CCeEEEEeCCCcEEE
Q 011970 226 --DKHVQEIKISPGI--MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH---RNKKVDFIEQF-NEKLLVKQENENLQI 297 (474)
Q Consensus 226 --~~~V~~vafSpg~--~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~---~v~~V~F~~~~-~~~ll~~~~D~tIkI 297 (474)
...|.+++|+|++ +++++ +.|++|++||+++++++.++.+|.. .+..++|+ |+ +..+++++.|++|++
T Consensus 158 ~~~~~v~~~~~~~~~~~~l~~~---~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 158 GHSQRINACHLKQSRPMRSMTV---GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS-PDSGEFVITVGSDRKISC 233 (615)
T ss_dssp SCSSCEEEEEECSSSSCEEEEE---ETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC-STTCCEEEEEETTCCEEE
T ss_pred cCCccEEEEEECCCCCcEEEEE---eCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC-CCCCCEEEEEeCCCeEEE
Confidence 4689999999865 56665 4589999999999999999999988 99999998 56 788888999999999
Q ss_pred EECCCCceEEec-c---ccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCC
Q 011970 298 LDVRNAELMEVS-R---TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD 371 (474)
Q Consensus 298 WDv~tg~~~~~l-~---~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~ 371 (474)
||+++++++..+ . +|...|.+++|+ ++++|++++ |++|++||++ ++++.++..|...+. ..+.++.|+ +++
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~ 310 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG-NQQVGVVAT-GNG 310 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGG-GCEEEEEEE-ETT
T ss_pred EECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCccc-CceeEEEeC-CCC
Confidence 999999999988 6 899999999999 999999999 9999999995 999999998843222 125778885 999
Q ss_pred EEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccc---cccccccccccccccccCE
Q 011970 372 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSK---KLNKSSYIRSTVGEALEDI 448 (474)
Q Consensus 372 ~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~V 448 (474)
+|++++. |++|++||+.+++++.++.+|......-.. +. .++. ....+|++......+...|
T Consensus 311 ~l~~~~~-----------~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~w~~~~~~~~~~~~v 375 (615)
T 1pgu_A 311 RIISLSL-----------DGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIMEWSSSSMHQDHSNLI 375 (615)
T ss_dssp EEEEEET-----------TSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEETTTTEEECCCCSCE
T ss_pred eEEEEEC-----------CCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEEEEchhhcCcccCce
Confidence 9999986 999999999999999999999851110000 10 1111 1222333221113445588
Q ss_pred EEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 449 TSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 449 ~slafSpDg~~LaSgs~DgtVklWd 473 (474)
++++| ++++.|++++.|++|++|+
T Consensus 376 ~~~~~-~~~~~l~~~~~d~~i~~~~ 399 (615)
T 1pgu_A 376 VSLDN-SKAQEYSSISWDDTLKVNG 399 (615)
T ss_dssp EEEEC-CSTTCCEEEETTTEEEETT
T ss_pred EEEEE-CCCcEEEEEeCCCCEEEEE
Confidence 89999 6678889999999999997
No 55
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.4e-42 Score=334.01 Aligned_cols=292 Identities=14% Similarity=0.124 Sum_probs=235.5
Q ss_pred ceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCC-
Q 011970 119 RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN- 197 (474)
Q Consensus 119 ~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~n- 197 (474)
+.+..+..+|.+.|.+++|+|+|+.|++++.....| .+++||++..+++.. ....++...+.+++|+ |+
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d------~~v~iw~~~~~~~~~---~~~~~~~~~v~~~~~~-~~~ 77 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGT------GVIQLYEIQHGDLKL---LREIEKAKPIKCGTFG-ATS 77 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCC------EEEEEEEECSSSEEE---EEEEEESSCEEEEECT-TCC
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCC------cEEEEEeCCCCcccc---eeeecccCcEEEEEEc-CCC
Confidence 333333334889999999999998776544221126 799999999888632 2222345567799998 56
Q ss_pred --CeEEEEecCCCcEEEeecCCCe-EEEEEc--CCcEEEEE------EcC-CceEEEEecCCCCccEEEEecCCCe-EEE
Q 011970 198 --GKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKHVQEIK------ISP-GIMLLIFNRSSSHVPLKILSIEDGT-VLK 264 (474)
Q Consensus 198 --Gk~LaS~s~D~tiKlWdl~tg~-~l~tl~--~~~V~~va------fSp-g~~la~~s~~s~D~tIkLWdi~tG~-~L~ 264 (474)
|++|++++.|++|++||+.+++ ++.++. ...|.+++ |+| +..|+++ +.|++|++||+++++ ++.
T Consensus 78 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~---~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 78 LQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTG---SRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp TTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEE---ETTSCEEEECTTSCSSCSE
T ss_pred CCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEE---eCCCeEEEEeCCCCCCcce
Confidence 7999999999999999999988 777775 46799995 566 4566655 458999999999998 788
Q ss_pred EEeecCc----ceeEEEEEe---cCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcC---CCcEEEEEc-C
Q 011970 265 VFYHLLH----RNKKVDFIE---QFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLY---ENQLFLTFR-N 333 (474)
Q Consensus 265 tl~~h~~----~v~~V~F~~---~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp---dg~llaS~s-D 333 (474)
++..|.. .+.+++|.+ +++..+++++.|++|++||+++++++.. ..|...|.+++|+| ++++|++++ |
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~d 233 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLE 233 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEEST
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCC
Confidence 8876544 788898633 6788888899999999999999998655 66788999999999 999999999 9
Q ss_pred CcEEEEeCC-CcEEEEec-----cCCCCcCCCCeeEEEECCCCC-EEEEEecCCCccccccCCCCeEEEEeCCCC-----
Q 011970 334 RTVAVWNFR-GELVTSFE-----DHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSAGSINVSSILTG----- 401 (474)
Q Consensus 334 ~tIklWd~~-G~ll~tl~-----gH~~~~~~~~v~svafSpDg~-~LaS~s~~~~~~~~~~s~DgtIklWdi~tG----- 401 (474)
++|++||++ ++++..+. +|... |.+++|+|+|+ +|++++. ||+|+|||+.++
T Consensus 234 g~i~i~d~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~ 297 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFASVSEKAHKST-----VWQVRHLPQNRELFLTAGG-----------AGGLHLWKYEYPIQRSK 297 (357)
T ss_dssp TEEEEEEEEEEETTTEEEEEEEECCSSC-----EEEEEEETTEEEEEEEEET-----------TSEEEEEEEECCSCC--
T ss_pred CeEEEEeCcCCCcccceeeeccCCCcCC-----EEEEEECCCCCcEEEEEeC-----------CCcEEEeecCCCccccc
Confidence 999999995 66655544 89876 79999999999 8999886 999999999764
Q ss_pred --------------eEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEE-EEcCC
Q 011970 402 --------------KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY-TGNRH 466 (474)
Q Consensus 402 --------------~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~La-Sgs~D 466 (474)
+++.++.+|.. .|++++|+|||+.|+ ||+.|
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~----------------------------------~v~~~~~s~~~~~l~~s~~~d 343 (357)
T 3i2n_A 298 KDSEGIEMGVAGSVSLLQNVTLSTQ----------------------------------PISSLDWSPDKRGLCVCSSFD 343 (357)
T ss_dssp CCTTSCCCCCCCEEEEEEEEECCSS----------------------------------CEEEEEECSSSTTEEEEEETT
T ss_pred ccCCCCccccccccceeeccccCCC----------------------------------CeeEEEEcCCCCeEEEEecCC
Confidence 57888888875 899999999999998 89999
Q ss_pred CcEEEccC
Q 011970 467 GLVHVWSN 474 (474)
Q Consensus 467 gtVklWd~ 474 (474)
|+|+|||.
T Consensus 344 ~~i~iw~~ 351 (357)
T 3i2n_A 344 QTVRVLIV 351 (357)
T ss_dssp SEEEEEEE
T ss_pred CcEEEEEC
Confidence 99999983
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-41 Score=336.05 Aligned_cols=299 Identities=15% Similarity=0.170 Sum_probs=240.1
Q ss_pred CCeEEeeeccccceeeEeecCCCceEEEEEEeeCCC-EEEEEEeecCCCccceeeeEEEEeEe----ccCCCCCc---cc
Q 011970 107 SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNND-SLITVSVYASDNFSSLKCRSTKIEYI----RRGKPDSG---FA 178 (474)
Q Consensus 107 dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~-~Lis~S~~~s~d~s~Lk~~~~~iw~i----~~G~~~~~---~~ 178 (474)
...+.+|+.+.......... |...|.+++|+|+|+ .||+++ .| ..++||++ ..|+.... ..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~~~~----~d------g~i~iw~~~~~~~~~~~~~~~~~~~ 92 (425)
T 1r5m_A 24 NSIDSSDDLDGFVKILKEIV-KLDNIVSSTWNPLDESILAYGE----KN------SVARLARIVETDQEGKKYWKLTIIA 92 (425)
T ss_dssp ----------CCCEECEEEE-ECSCCSEEEECSSCTTEEEEEE----TB------TEEEEEEEEEC------CEEEEEEE
T ss_pred ccccccccchhhhhheeeee-ccCceEEEEECCCCCcEEEEec----CC------ceEEEEEEecccCCccccccccccc
Confidence 34556787664443333232 557899999999999 999976 44 58999999 88883100 00
Q ss_pred eeee---------ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEecC
Q 011970 179 LFES---------ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRS 246 (474)
Q Consensus 179 lf~~---------~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~ 246 (474)
.+.+ .+...+..++|+ |||++|++++.|++|+||| .+++++..+. ...|.+++|+| +..|+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--- 167 (425)
T 1r5m_A 93 ELRHPFALSASSGKTTNQVTCLAWS-HDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISM--- 167 (425)
T ss_dssp EEECCCCCC------CBCEEEEEEC-TTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEE---
T ss_pred cccccccccccccCCCCceEEEEEc-CCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEE---
Confidence 1111 023467789998 7999999999999999999 7888888886 46899999998 4556655
Q ss_pred CCCccEEEEecCCCeEEEEEeecCcc---------------eeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc
Q 011970 247 SSHVPLKILSIEDGTVLKVFYHLLHR---------------NKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT 311 (474)
Q Consensus 247 s~D~tIkLWdi~tG~~L~tl~~h~~~---------------v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~ 311 (474)
+.|++|++||+++|+++.++..+... +..++|++ ++.+++++.|+.|++||+.+++++..+.+
T Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 245 (425)
T 1r5m_A 168 DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD--DDKFVIPGPKGAIFVYQITEKTPTGKLIG 245 (425)
T ss_dssp ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE--TTEEEEECGGGCEEEEETTCSSCSEEECC
T ss_pred ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC--CCEEEEEcCCCeEEEEEcCCCceeeeecc
Confidence 44789999999999999999987666 89999985 57899999999999999999999999999
Q ss_pred cCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCC
Q 011970 312 EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGS 389 (474)
Q Consensus 312 h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~ 389 (474)
|...|.+++|+|++++|++++ |++|++||++ ++++.++.+|... |.+++|+||| +|++++.
T Consensus 246 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----i~~~~~~~~~-~l~~~~~----------- 308 (425)
T 1r5m_A 246 HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQS-----IVSASWVGDD-KVISCSM----------- 308 (425)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSC-----EEEEEEETTT-EEEEEET-----------
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCcc-----EEEEEECCCC-EEEEEeC-----------
Confidence 999999999999999999999 9999999995 9999999999876 7899999999 9998876
Q ss_pred CCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcE
Q 011970 390 AGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLV 469 (474)
Q Consensus 390 DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtV 469 (474)
|++|++||+.+++++.++.+|.. .|++++|+|||+.||+|+.||+|
T Consensus 309 d~~i~i~d~~~~~~~~~~~~~~~----------------------------------~i~~~~~s~~~~~l~~~~~dg~i 354 (425)
T 1r5m_A 309 DGSVRLWSLKQNTLLALSIVDGV----------------------------------PIFAGRISQDGQKYAVAFMDGQV 354 (425)
T ss_dssp TSEEEEEETTTTEEEEEEECTTC----------------------------------CEEEEEECTTSSEEEEEETTSCE
T ss_pred CCcEEEEECCCCcEeEecccCCc----------------------------------cEEEEEEcCCCCEEEEEECCCeE
Confidence 99999999999999999999985 89999999999999999999999
Q ss_pred EEccC
Q 011970 470 HVWSN 474 (474)
Q Consensus 470 klWd~ 474 (474)
++||.
T Consensus 355 ~i~~~ 359 (425)
T 1r5m_A 355 NVYDL 359 (425)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99984
No 57
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-42 Score=355.28 Aligned_cols=302 Identities=13% Similarity=0.079 Sum_probs=236.7
Q ss_pred eeeEeecCCCceEEEEEEee-CCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCC
Q 011970 120 RICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNG 198 (474)
Q Consensus 120 ~l~~l~g~~~~~i~sv~fsp-dg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nG 198 (474)
......+ |+..|.+|+|+| ++.+||+++ .| .+|+|||+..++......+. +|...|.+|+|+|.||
T Consensus 111 ~~~~~~~-~~~~V~~l~~~P~~~~~lasGs----~d------g~i~lWd~~~~~~~~~~~~~--gH~~~V~~l~f~p~~~ 177 (435)
T 4e54_B 111 ILQKAAP-FDRRATSLAWHPTHPSTVAVGS----KG------GDIMLWNFGIKDKPTFIKGI--GAGGSITGLKFNPLNT 177 (435)
T ss_dssp SCCEEEE-CSSCEEEEEECSSCTTCEEEEE----TT------SCEEEECSSCCSCCEEECCC--SSSCCCCEEEECSSCT
T ss_pred ecccCCC-CCCCEEEEEEeCCCCCEEEEEe----CC------CEEEEEECCCCCceeEEEcc--CCCCCEEEEEEeCCCC
Confidence 3445555 778899999999 566888866 55 69999999888753322222 3556778999995589
Q ss_pred eEEEEecCCCcEEEeecCCCeEEEEEcC----CcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEEEEeecCcce
Q 011970 199 KVLTYSAQDSIYKVFDLKNYTMLYSISD----KHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN 273 (474)
Q Consensus 199 k~LaS~s~D~tiKlWdl~tg~~l~tl~~----~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v 273 (474)
++|+|||.|++|||||++++.+...... ..+.+++|+|+ .+|+++ +.|++|+|||++ |+++.++.+|...|
T Consensus 178 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g---~~dg~i~~wd~~-~~~~~~~~~h~~~v 253 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTG---DNVGNVILLNMD-GKELWNLRMHKKKV 253 (435)
T ss_dssp TEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEE---CSSSBEEEEESS-SCBCCCSBCCSSCE
T ss_pred CEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEE---eCCCcEeeeccC-cceeEEEecccceE
Confidence 9999999999999999987665443332 35789999984 555554 568999999985 67888999999999
Q ss_pred eEEEEEecCCC-eEEEEeCCCcEEEEECCCCceEEe---ccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEE
Q 011970 274 KKVDFIEQFNE-KLLVKQENENLQILDVRNAELMEV---SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVT 347 (474)
Q Consensus 274 ~~V~F~~~~~~-~ll~~~~D~tIkIWDv~tg~~~~~---l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~ 347 (474)
.+|+|+| ++. .+++++.|++|+|||+++++.... ..+|...|.+++|+|||++|+|++ |++|+|||+. |++..
T Consensus 254 ~~v~~~p-~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 254 THVALNP-CCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp EEEEECT-TCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred EeeeecC-CCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 9999984 455 556688999999999999876543 467999999999999999999999 9999999995 99999
Q ss_pred EeccCCCCcCC-CCeeEEEECCCCCEEEEEecCCCccc-cccCCCCeEEEEeCCCCeEEEEecC-CCCCCCCccccCCCC
Q 011970 348 SFEDHLLWHPD-CNTNNIYITSDQDLIISYCKAEPEDQ-WMEGSAGSINVSSILTGKCLAKINA-TNCSPKVDDELGSSS 424 (474)
Q Consensus 348 tl~gH~~~~~~-~~v~svafSpDg~~LaS~s~~~~~~~-~~~s~DgtIklWdi~tG~cl~tl~g-H~~~~~~~~~~~~~~ 424 (474)
.+.+|...... ..+..+.|+|++.++++++..+.... +.+..+++|+|||+.+|+++.++.+ |..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~------------ 400 (435)
T 4e54_B 333 GLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESS------------ 400 (435)
T ss_dssp EECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCC------------
T ss_pred EEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCC------------
Confidence 99888753211 11345789999999998875443333 3344567999999999999999864 553
Q ss_pred CCccccccccccccccccccccCEEEE-EEcCCCCEEEEEcCCCcEEEccC
Q 011970 425 TGKSKKLNKSSYIRSTVGEALEDITSL-FYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~l~~V~sl-afSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|.++ +|||||++||||+ |++|+||+.
T Consensus 401 ----------------------~v~s~~~fspdg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 401 ----------------------GISSLNEFNPMGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp ----------------------CCCCEEEECTTSSCEEEEC-SSEEEECCC
T ss_pred ----------------------cEEEEEEECCCCCEEEEEc-CCcEEEEEC
Confidence 67776 7999999999987 889999984
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-41 Score=337.21 Aligned_cols=299 Identities=10% Similarity=0.029 Sum_probs=242.3
Q ss_pred eeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccc-eeee-ccccCceEEEEeCCC-
Q 011970 121 ICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFA-LFES-ESLKWPGFVEFDDVN- 197 (474)
Q Consensus 121 l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~-lf~~-~~~~~~~~V~Fs~~n- 197 (474)
..+|.+ |.+.|.+|+|+| +.|++++ .| .+++||++..++....+. +... .+...+..++|+ |+
T Consensus 9 ~~~~~~-h~~~i~~~~~~~--~~l~s~~----~d------g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~ 74 (397)
T 1sq9_A 9 ANAGKA-HDADIFSVSACN--SFTVSCS----GD------GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL-QAI 74 (397)
T ss_dssp EEESSC-SSSCEEEEEECS--SEEEEEE----TT------SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEE-EEE
T ss_pred hhhhhh-hhcCeEEEEecC--CeEEEEc----CC------CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEe-ccc
Confidence 446665 889999999999 7899876 45 699999999888211111 1111 245567799998 68
Q ss_pred ---C---eEEEEecCCCcEEEeecCCCeE-----EEEEc-------CCcEEEEEEc----CC-ce-EEEEecCCCCccEE
Q 011970 198 ---G---KVLTYSAQDSIYKVFDLKNYTM-----LYSIS-------DKHVQEIKIS----PG-IM-LLIFNRSSSHVPLK 253 (474)
Q Consensus 198 ---G---k~LaS~s~D~tiKlWdl~tg~~-----l~tl~-------~~~V~~vafS----pg-~~-la~~s~~s~D~tIk 253 (474)
| ++|++++.|++|++||+.++++ +..+. ...|.+++|+ |+ .. |+++ +.|+.|+
T Consensus 75 ~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~---~~dg~i~ 151 (397)
T 1sq9_A 75 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT---DVKGTTY 151 (397)
T ss_dssp ETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEE---ETTSCEE
T ss_pred ccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEE---eCCCcEE
Confidence 9 9999999999999999998886 77775 2679999999 84 45 5554 4479999
Q ss_pred EEecCC------CeEEE-----EEee-------cCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc---c
Q 011970 254 ILSIED------GTVLK-----VFYH-------LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT---E 312 (474)
Q Consensus 254 LWdi~t------G~~L~-----tl~~-------h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~---h 312 (474)
+||+++ ++++. ++.+ |...+.+++|+ |++ .+++++.|++|+|||+++++++..+.+ |
T Consensus 152 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h 229 (397)
T 1sq9_A 152 IWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS-ERG-LIATGFNNGTVQISELSTLRPLYNFESQHSM 229 (397)
T ss_dssp EEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC-TTS-EEEEECTTSEEEEEETTTTEEEEEEECCC--
T ss_pred EEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEEC-CCc-eEEEEeCCCcEEEEECCCCceeEEEeccccc
Confidence 999999 88887 8854 78889999998 556 888889999999999999999999888 9
Q ss_pred ---CCceEEEEEcCCCcEEEEEc-C---CcEEEEeCC-CcEEEEecc-------------CCCCcCCCCeeEEEECCCCC
Q 011970 313 ---FMTPSAFIFLYENQLFLTFR-N---RTVAVWNFR-GELVTSFED-------------HLLWHPDCNTNNIYITSDQD 371 (474)
Q Consensus 313 ---~~~v~sv~Fspdg~llaS~s-D---~tIklWd~~-G~ll~tl~g-------------H~~~~~~~~v~svafSpDg~ 371 (474)
...+.+++|+|++++|++++ | ++|++||+. ++++.++.+ |... |.+++|+|||+
T Consensus 230 ~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~ 304 (397)
T 1sq9_A 230 INNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-----VMSLSFNDSGE 304 (397)
T ss_dssp -CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC-----EEEEEECSSSS
T ss_pred cccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc-----EEEEEECCCCC
Confidence 99999999999999999999 9 999999995 999999999 8876 79999999999
Q ss_pred EEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEec------CCCC-CCCCccccCCCCCCcccccccccccccccccc
Q 011970 372 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN------ATNC-SPKVDDELGSSSTGKSKKLNKSSYIRSTVGEA 444 (474)
Q Consensus 372 ~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~------gH~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (474)
+|++++. |++|+|||+.+++++.++. +|.. ...+... ....+
T Consensus 305 ~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------------------~~~~~ 353 (397)
T 1sq9_A 305 TLCSAGW-----------DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEH--------------------GDSLA 353 (397)
T ss_dssp EEEEEET-----------TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTT--------------------SCBCS
T ss_pred EEEEEeC-----------CCeEEEEEcCCCceeEEEecccCcccchhhhhccccc--------------------ccccc
Confidence 9999986 9999999999999999999 7710 0000000 00001
Q ss_pred ccCEEEEEEcCCC----------CEEEEEcCCCcEEEccC
Q 011970 445 LEDITSLFYDEER----------NEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 445 l~~V~slafSpDg----------~~LaSgs~DgtVklWd~ 474 (474)
-..|++++|+||| +.|++|+.||+|++|+.
T Consensus 354 ~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 354 EPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp SCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred CCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 1389999999999 79999999999999983
No 59
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.8e-42 Score=336.66 Aligned_cols=309 Identities=12% Similarity=0.154 Sum_probs=251.3
Q ss_pred eCCCeEEeeeccccceeeEeecCCCceEEEEEEee-CCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceee--
Q 011970 105 AHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-- 181 (474)
Q Consensus 105 s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fsp-dg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~-- 181 (474)
+.++++++|+.++++....+.+ |.+.|.+++|+| +|+.||+++ .| .+++||++..++....+....
T Consensus 20 ~~~~~~~v~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~~l~~~~----~d------g~i~iw~~~~~~~~~~~~~~~~~ 88 (408)
T 4a11_B 20 RAESTRRVLGLELNKDRDVERI-HGGGINTLDIEPVEGRYMLSGG----SD------GVIVLYDLENSSRQSYYTCKAVC 88 (408)
T ss_dssp HHHHHHHHHTEEECTTEEECCC-CSSCEEEEEECTTTCCEEEEEE----TT------SCEEEEECCCCSSSSCEEECEEE
T ss_pred eccCcceeeccccCcceeeeec-cCCcEEEEEEecCCCCEEEEEc----CC------CeEEEEECCCCcccceEeccccc
Confidence 4567899999999999999987 889999999999 999999976 45 689999999888754322111
Q ss_pred -------eccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCC---c-eEEEEecCCCC
Q 011970 182 -------SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPG---I-MLLIFNRSSSH 249 (474)
Q Consensus 182 -------~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg---~-~la~~s~~s~D 249 (474)
..+...+..++|+|.++++|++++.|++|++||+.+++++..+. ...+..++|+|. + +++++ +.|
T Consensus 89 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 165 (408)
T 4a11_B 89 SIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVG---TRG 165 (408)
T ss_dssp EECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEE---ESS
T ss_pred cccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEE---cCC
Confidence 12455677899984488899999999999999999999988886 568999999972 2 55555 447
Q ss_pred ccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCe-EEEEeCCCcEEEEECCCCc-eEEec---------------ccc
Q 011970 250 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEK-LLVKQENENLQILDVRNAE-LMEVS---------------RTE 312 (474)
Q Consensus 250 ~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~-ll~~~~D~tIkIWDv~tg~-~~~~l---------------~~h 312 (474)
+.|++||+++++++.++.+|...+..++|+ |++.+ +++++.|++|+|||+++++ ++..+ .+|
T Consensus 166 ~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (408)
T 4a11_B 166 PKVQLCDLKSGSCSHILQGHRQEILAVSWS-PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAH 244 (408)
T ss_dssp SSEEEEESSSSCCCEEECCCCSCEEEEEEC-SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSC
T ss_pred CeEEEEeCCCcceeeeecCCCCcEEEEEEC-CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccc
Confidence 899999999999999999999999999998 55664 6678999999999999876 45544 678
Q ss_pred CCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCe-eEEEECCCCCEEEEEecCCCccccccCC
Q 011970 313 FMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNT-NNIYITSDQDLIISYCKAEPEDQWMEGS 389 (474)
Q Consensus 313 ~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v-~svafSpDg~~LaS~s~~~~~~~~~~s~ 389 (474)
...|.+++|+|+|++|++++ |++|++||+. ++.+..+.++........+ ..+...+.+.+++ ++.
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------- 312 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVF-VPY----------- 312 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEE-EEE-----------
T ss_pred cCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEE-Eec-----------
Confidence 89999999999999999999 9999999995 8877666554332111111 2233333444444 444
Q ss_pred CCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcE
Q 011970 390 AGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLV 469 (474)
Q Consensus 390 DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtV 469 (474)
|++|++||+.+|+++.++.+|.. .|++++|+|||+.|+||+.||+|
T Consensus 313 ~~~i~v~d~~~~~~~~~~~~~~~----------------------------------~v~~~~~s~~~~~l~s~~~dg~i 358 (408)
T 4a11_B 313 GSTIAVYTVYSGEQITMLKGHYK----------------------------------TVDCCVFQSNFQELYSGSRDCNI 358 (408)
T ss_dssp TTEEEEEETTTCCEEEEECCCSS----------------------------------CEEEEEEETTTTEEEEEETTSCE
T ss_pred CCEEEEEECcCCcceeeeccCCC----------------------------------eEEEEEEcCCCCEEEEECCCCeE
Confidence 89999999999999999999986 89999999999999999999999
Q ss_pred EEccC
Q 011970 470 HVWSN 474 (474)
Q Consensus 470 klWd~ 474 (474)
++||.
T Consensus 359 ~iw~~ 363 (408)
T 4a11_B 359 LAWVP 363 (408)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99973
No 60
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=322.34 Aligned_cols=274 Identities=10% Similarity=0.087 Sum_probs=223.8
Q ss_pred EEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEE
Q 011970 132 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYK 211 (474)
Q Consensus 132 i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiK 211 (474)
.+.|+|||+| .||++. | ++|+|||+.+|++...+.+. ++..+|.+|+|+ |+|++||+|+.|++|+
T Consensus 28 ~~~l~WS~~~-~lAvg~-----D------~tV~iWd~~tg~~~~~~~~~--~~~~~V~~v~~~-~~~~~l~sgs~Dg~v~ 92 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-----D------NSVYLWSASSGDILQLLQME--QPGEYISSVAWI-KEGNYLAVGTSSAEVQ 92 (318)
T ss_dssp CBCEEECTTS-EEEEEE-----T------TEEEEEETTTCCEEEEEECC--STTCCEEEEEEC-TTSSEEEEEETTSEEE
T ss_pred ceEEEECCCC-EEEEEe-----C------CEEEEEECCCCCEEEEEEec--CCCCeEEEEEEC-CCCCEEEEEECCCcEE
Confidence 4568999987 666532 3 59999999999985532222 345678899998 7999999999999999
Q ss_pred EeecCCCeEEEEEcCC--cEEEEEEcCCceEEEEecCCCCccEEEEecCCC-eEEEEEeecCcceeEEEEEecCCCeEEE
Q 011970 212 VFDLKNYTMLYSISDK--HVQEIKISPGIMLLIFNRSSSHVPLKILSIEDG-TVLKVFYHLLHRNKKVDFIEQFNEKLLV 288 (474)
Q Consensus 212 lWdl~tg~~l~tl~~~--~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG-~~L~tl~~h~~~v~~V~F~~~~~~~ll~ 288 (474)
|||+++++++.++.++ .+..+++. +..++++ +.++.+++|+..++ ..+.++.+|...+..+.|. +.+..+++
T Consensus 93 iw~~~~~~~~~~~~~h~~~~~~~~~~-~~~l~s~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s 167 (318)
T 4ggc_A 93 LWDVQQQKRLRNMTSHSARVGSLSWN-SYILSSG---SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA-PDGRHLAS 167 (318)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEEE-TTEEEEE---ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSEEEE
T ss_pred EeecCCceeEEEecCccceEEEeecC-CCEEEEE---ecCCceEeeecCCCceeEEEEcCccCceEEEEEc-CCCCEEEE
Confidence 9999999999988754 45544444 4556655 44789999998876 5678889999999999986 66788888
Q ss_pred EeCCCcEEEEECCCCce----EEeccccCCceEEEEEcCCCcEE---EEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCC
Q 011970 289 KQENENLQILDVRNAEL----MEVSRTEFMTPSAFIFLYENQLF---LTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDC 359 (474)
Q Consensus 289 ~~~D~tIkIWDv~tg~~----~~~l~~h~~~v~sv~Fspdg~ll---aS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~ 359 (474)
++.|++|+|||+++++. ......|...|.+++++|++..+ ++++ |++|+|||.+ ++.......+. .
T Consensus 168 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~-~---- 242 (318)
T 4ggc_A 168 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-Q---- 242 (318)
T ss_dssp EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS-C----
T ss_pred EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee-e----
Confidence 99999999999999874 34456788899999999876543 3556 9999999996 66666655443 3
Q ss_pred CeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccc
Q 011970 360 NTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRS 439 (474)
Q Consensus 360 ~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (474)
+..+.|+|+++.+++++. +.|++|+|||+.+|+++++|+||..
T Consensus 243 -v~~~~~~~~~~~~~~~sg---------~~d~~i~iwd~~~~~~~~~l~gH~~--------------------------- 285 (318)
T 4ggc_A 243 -VCSILWSPHYKELISGHG---------FAQNQLVIWKYPTMAKVAELKGHTS--------------------------- 285 (318)
T ss_dssp -EEEEEEETTTTEEEEEEC---------TTTCCEEEEETTTCCEEEEECCCSS---------------------------
T ss_pred -eeeeeecccccceEEEEE---------cCCCEEEEEECCCCcEEEEEcCCCC---------------------------
Confidence 689999999999998762 4599999999999999999999996
Q ss_pred cccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 440 TVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 440 ~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++|+|||||++|||||.||+|||||.
T Consensus 286 -------~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 286 -------RVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp -------CEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred -------CEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 8999999999999999999999999984
No 61
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.8e-41 Score=363.46 Aligned_cols=292 Identities=13% Similarity=0.123 Sum_probs=246.9
Q ss_pred cccceeecccCCCCCcccccccccccccEEEEEeeccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCC
Q 011970 63 MHLVEEYDTHDPKGHCPFVLPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNND 142 (474)
Q Consensus 63 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~ 142 (474)
+.++..|..|..+..++.+.|+ +..||+++.||+|++||..+|++++++.+ |...|.+++|+|+|+
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~-------------~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~ 68 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPT-------------EPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKN 68 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSS-------------SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT
T ss_pred cccceeeecCCCceEEEEECCC-------------CCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCC
Confidence 4455666666666666555555 99999999999999999999999999996 778999999999999
Q ss_pred EEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCC-eEE
Q 011970 143 SLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY-TML 221 (474)
Q Consensus 143 ~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg-~~l 221 (474)
.|++++ .| ..++||++.+|+.... +. .+...+..++|+ |+|++|++++.|++|+|||+.++ .+.
T Consensus 69 ~l~~~~----~d------g~i~vw~~~~~~~~~~---~~-~~~~~v~~~~~s-~~~~~l~~~~~dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 69 WIIVGS----DD------FRIRVFNYNTGEKVVD---FE-AHPDYIRSIAVH-PTKPYVLSGSDDLTVKLWNWENNWALE 133 (814)
T ss_dssp EEEEEE----TT------SEEEEEETTTCCEEEE---EE-CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEGGGTSEEE
T ss_pred EEEEEe----CC------CeEEEEECCCCcEEEE---Ee-cCCCCEEEEEEe-CCCCEEEEEcCCCEEEEEECCCCceEE
Confidence 999976 45 6999999999986432 22 245667799998 79999999999999999999987 666
Q ss_pred EEEc--CCcEEEEEEcC-Cc-eEEEEecCCCCccEEEEecCCCeEEEEEeecC-cceeEEEEEec-CCCeEEEEeCCCcE
Q 011970 222 YSIS--DKHVQEIKISP-GI-MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLL-HRNKKVDFIEQ-FNEKLLVKQENENL 295 (474)
Q Consensus 222 ~tl~--~~~V~~vafSp-g~-~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~-~~v~~V~F~~~-~~~~ll~~~~D~tI 295 (474)
.++. ...|.+++|+| ++ .++++ +.|++|++||+.+++...++..+. ..+..++|++. ++..+++++.|++|
T Consensus 134 ~~~~~~~~~v~~~~~~p~~~~~l~~~---~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i 210 (814)
T 3mkq_A 134 QTFEGHEHFVMCVAFNPKDPSTFASG---CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (814)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEE---ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEE
T ss_pred EEEcCCCCcEEEEEEEcCCCCEEEEE---eCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEE
Confidence 6665 46799999998 55 55554 457999999999999988888554 78999999852 67788889999999
Q ss_pred EEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCC--
Q 011970 296 QILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-- 371 (474)
Q Consensus 296 kIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~-- 371 (474)
++||+.+++++.++.+|...|.+++|+|+|++|++++ |++|++||+. ++++.++..|... ++.++|+|+|+
T Consensus 211 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-----SWCIATHPTGRKN 285 (814)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSS-----EEEEEECTTCGGG
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCc-----EEEEEEccCCCce
Confidence 9999999999999999999999999999999999999 9999999995 9999999999876 79999999998
Q ss_pred EEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 372 LIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 372 ~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
++++++ |+.+.+|++.++..
T Consensus 286 ~~~~~~------------~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 286 YIASGF------------DNGFTVLSLGNDEP 305 (814)
T ss_dssp EEEEEE------------TTEEEEEECSCCSC
T ss_pred EEEEEe------------CCCEEEEEcCCCCc
Confidence 577665 77888999765443
No 62
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.4e-41 Score=331.04 Aligned_cols=236 Identities=13% Similarity=0.179 Sum_probs=201.2
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecCC--CeEEEEEc--CCcEEEEEEcC---CceEEEEecCCCCccEEEEe
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN--YTMLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLKILS 256 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~t--g~~l~tl~--~~~V~~vafSp---g~~la~~s~~s~D~tIkLWd 256 (474)
|...|..++|+ |||++||+|+.|++|||||+++ ++++.++. ...|++|+|+| +.+||++ +.|++|+|||
T Consensus 8 h~~~V~~~~~s-~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~---s~D~~v~iWd 83 (297)
T 2pm7_B 8 HNEMIHDAVMD-YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVMIWK 83 (297)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEE---ETTTEEEEEE
T ss_pred CcCceEEEEEC-CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEE---cCCCEEEEEE
Confidence 55677899998 7999999999999999999975 46778876 46899999985 5677776 4589999999
Q ss_pred cCCCe--EEEEEeecCcceeEEEEEecC-CCeEEEEeCCCcEEEEECCCCce--EEeccccCCceEEEEEcCC-------
Q 011970 257 IEDGT--VLKVFYHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNAEL--MEVSRTEFMTPSAFIFLYE------- 324 (474)
Q Consensus 257 i~tG~--~L~tl~~h~~~v~~V~F~~~~-~~~ll~~~~D~tIkIWDv~tg~~--~~~l~~h~~~v~sv~Fspd------- 324 (474)
+++|+ ++.++.+|...|.+|+|+|.. +..|++++.|++|+|||++++.. ...+.+|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 99984 677888899999999998532 67888899999999999998742 4567899999999999997
Q ss_pred ------CcEEEEEc-CCcEEEEeCC-Cc----EEEEeccCCCCcCCCCeeEEEECCCC---CEEEEEecCCCccccccCC
Q 011970 325 ------NQLFLTFR-NRTVAVWNFR-GE----LVTSFEDHLLWHPDCNTNNIYITSDQ---DLIISYCKAEPEDQWMEGS 389 (474)
Q Consensus 325 ------g~llaS~s-D~tIklWd~~-G~----ll~tl~gH~~~~~~~~v~svafSpDg---~~LaS~s~~~~~~~~~~s~ 389 (474)
+++||+++ |++|+|||++ ++ ++.+|++|..+ |++|+|+|++ ++|||+|.
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~-----V~~v~~sp~~~~~~~las~s~----------- 227 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPTVLLRSYMASVSQ----------- 227 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCCCSSSEEEEEEET-----------
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc-----eEEEEECCCCCCceEEEEEEC-----------
Confidence 57999999 9999999994 66 78899999988 7999999995 89999987
Q ss_pred CCeEEEEeCCCCe---EEEEe--cCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEc
Q 011970 390 AGSINVSSILTGK---CLAKI--NATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN 464 (474)
Q Consensus 390 DgtIklWdi~tG~---cl~tl--~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs 464 (474)
|++|+|||+.+++ ....+ .+|.. .|++++|+|||+.||+|+
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~----------------------------------~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPD----------------------------------VLWRASWSLSGNVLALSG 273 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSS----------------------------------CEEEEEECSSSCCEEEEE
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCC----------------------------------cEEEEEECCCCCEEEEEc
Confidence 9999999997753 22334 34443 899999999999999999
Q ss_pred CCCcEEEcc
Q 011970 465 RHGLVHVWS 473 (474)
Q Consensus 465 ~DgtVklWd 473 (474)
.|++|+||+
T Consensus 274 ~D~~v~lw~ 282 (297)
T 2pm7_B 274 GDNKVTLWK 282 (297)
T ss_dssp TTSCEEEEE
T ss_pred CCCcEEEEE
Confidence 999999997
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.1e-41 Score=332.16 Aligned_cols=285 Identities=9% Similarity=0.049 Sum_probs=240.5
Q ss_pred ccccEEEEEeeccEEEEeeCCCeEEeeeccccc------eeeEeecCCCceEEEEEEeeC----C---CEEEEEEeecCC
Q 011970 87 KRTKVIEIVAARDIVFALAHSGVCAAFSRETNR------RICFLNVSPDEVIRSLFYNKN----N---DSLITVSVYASD 153 (474)
Q Consensus 87 ~~~~V~~i~~s~~~las~s~dgtiklW~~~tg~------~l~~l~g~~~~~i~sv~fspd----g---~~Lis~S~~~s~ 153 (474)
|..+|.+|.|+.++||+++.||+|++|++.+++ ++..+.+ |...|.+++|+|+ | +.|++++ .
T Consensus 15 h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~~l~s~~----~ 89 (397)
T 1sq9_A 15 HDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELCLVATTS----F 89 (397)
T ss_dssp SSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEEEEEEEE----T
T ss_pred hhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEec-CCCcEEEEEEecccccCCccccEEEEEc----C
Confidence 677788888888899999999999999999998 8889986 7789999999999 9 9999876 4
Q ss_pred CccceeeeEEEEeEeccCCCCCccceeee-cc-----ccCceEEEEeC---CCCeE-EEEecCCCcEEEeecCC------
Q 011970 154 NFSSLKCRSTKIEYIRRGKPDSGFALFES-ES-----LKWPGFVEFDD---VNGKV-LTYSAQDSIYKVFDLKN------ 217 (474)
Q Consensus 154 d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~-~~-----~~~~~~V~Fs~---~nGk~-LaS~s~D~tiKlWdl~t------ 217 (474)
| .++++|++..++......+... .+ ...+..++|++ |+|++ |++++.|++|++||+.+
T Consensus 90 d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 90 S------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp T------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred C------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 4 5899999998885111111111 12 25677899972 48999 99999999999999998
Q ss_pred CeEEE-----EE---------cCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEee---c---CcceeEEE
Q 011970 218 YTMLY-----SI---------SDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH---L---LHRNKKVD 277 (474)
Q Consensus 218 g~~l~-----tl---------~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~---h---~~~v~~V~ 277 (474)
++++. ++ +...|.+++|+|++.++++ +.|+.|++||+++++++.++.. | ...+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATG---FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEE---CTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEE---eCCCcEEEEECCCCceeEEEeccccccccCCccceEE
Confidence 76655 55 3567999999986655554 5589999999999999999998 8 89999999
Q ss_pred EEecCCCeEEEEeCC---CcEEEEECCCCceEEeccc-------------cCCceEEEEEcCCCcEEEEEc-CCcEEEEe
Q 011970 278 FIEQFNEKLLVKQEN---ENLQILDVRNAELMEVSRT-------------EFMTPSAFIFLYENQLFLTFR-NRTVAVWN 340 (474)
Q Consensus 278 F~~~~~~~ll~~~~D---~tIkIWDv~tg~~~~~l~~-------------h~~~v~sv~Fspdg~llaS~s-D~tIklWd 340 (474)
|+ |++..|++++.| ++|+|||+++++++..+.+ |...|.+++|+|++++|++++ |++|+|||
T Consensus 241 ~~-~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 241 FS-PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp EC-SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred EC-CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 97 578888889999 9999999999999999998 999999999999999999999 99999999
Q ss_pred CC-CcEEEEec------cC---------------CCCcCCCCeeEEEECCCC----------CEEEEEecCCCccccccC
Q 011970 341 FR-GELVTSFE------DH---------------LLWHPDCNTNNIYITSDQ----------DLIISYCKAEPEDQWMEG 388 (474)
Q Consensus 341 ~~-G~ll~tl~------gH---------------~~~~~~~~v~svafSpDg----------~~LaS~s~~~~~~~~~~s 388 (474)
+. ++++.++. +| ... |++++|+||| ++|++++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----v~~~~~~~~g~~~~~~~~~~~~l~s~~~---------- 384 (397)
T 1sq9_A 320 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG-----VFDVKFLKKGWRSGMGADLNESLCCVCL---------- 384 (397)
T ss_dssp TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC-----EEEEEEECTTTSBSTTCTTSCEEEEEET----------
T ss_pred cCCCceeEEEecccCcccchhhhhccccccccccCCc-----eeEEEeccccccccccccccceEEEecC----------
Confidence 95 99999999 87 655 7999999999 79999987
Q ss_pred CCCeEEEEeCCCCe
Q 011970 389 SAGSINVSSILTGK 402 (474)
Q Consensus 389 ~DgtIklWdi~tG~ 402 (474)
||+|+|||+.+|+
T Consensus 385 -dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 385 -DRSIRWFREAGGK 397 (397)
T ss_dssp -TTEEEEEEEEC--
T ss_pred -CCcEEEEEcCCCC
Confidence 9999999998875
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-42 Score=345.55 Aligned_cols=283 Identities=10% Similarity=0.088 Sum_probs=237.9
Q ss_pred ceEEEEEEeeCCC-EEEEEEeec------CCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEE
Q 011970 130 EVIRSLFYNKNND-SLITVSVYA------SDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLT 202 (474)
Q Consensus 130 ~~i~sv~fspdg~-~Lis~S~~~------s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~La 202 (474)
+.|.+++|+|+|+ .|++++..| +.| .+++||++..++.......+. +...+..++|+ |||++|+
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d------~~v~iw~~~~~~~~~~~~~~~--~~~~v~~~~~s-~~~~~l~ 83 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTD------SSLELWSLLAADSEKPIASLQ--VDSKFNDLDWS-HNNKIIA 83 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCC------CCCEEEESSSGGGCSCSCCCC--CSSCEEEEEEC-SSSSCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCC------CeEEEEEccCCCCCcEEEEEe--cCCceEEEEEC-CCCCeEE
Confidence 3578899999998 888865444 566 799999998886422112233 34457789998 7999999
Q ss_pred EecCCCcEEEeecCC----CeEEEEEc--CCcEEEEEEcC--CceEEEEecCCCCccEEEEecCCCe------EEE---E
Q 011970 203 YSAQDSIYKVFDLKN----YTMLYSIS--DKHVQEIKISP--GIMLLIFNRSSSHVPLKILSIEDGT------VLK---V 265 (474)
Q Consensus 203 S~s~D~tiKlWdl~t----g~~l~tl~--~~~V~~vafSp--g~~la~~s~~s~D~tIkLWdi~tG~------~L~---t 265 (474)
+++.|++|+|||+.+ .+++.++. ...|.+++|+| +.+|+++ +.|++|+|||+++++ ... .
T Consensus 84 ~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 84 GALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASG---GNNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp EEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEE---CSSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred EEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEE---cCCCeEEEEECCCCcccccccccccccc
Confidence 999999999999987 35777775 46899999998 4566655 558999999999987 333 3
Q ss_pred EeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecccc------CCceEEEEEcCCC-cEEEEEc-CC---
Q 011970 266 FYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE------FMTPSAFIFLYEN-QLFLTFR-NR--- 334 (474)
Q Consensus 266 l~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h------~~~v~sv~Fspdg-~llaS~s-D~--- 334 (474)
+..|...+..++|++..+..+++++.|++|+|||+++++++..+..| ...+.+++|+|++ ++|++++ |+
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 46788899999998433567777899999999999999999888776 7899999999997 6899988 88
Q ss_pred cEEEEeCC-C-cEEEEec-cCCCCcCCCCeeEEEECC-CCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 335 TVAVWNFR-G-ELVTSFE-DHLLWHPDCNTNNIYITS-DQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 335 tIklWd~~-G-~ll~tl~-gH~~~~~~~~v~svafSp-Dg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
+|++||++ + +++.++. +|... |.+++|+| |+++|++++. |++|+|||+.+++++.++.+|
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~~l~s~~~-----------dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQKG-----ILSLDWCHQDEHLLLSSGR-----------DNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCSSC-----EEEEEECSSCSSCEEEEES-----------SSEEEEECSSSCCEEEEEECS
T ss_pred eEEEEeCCCCCCCcEEeecCccCc-----eeEEEeCCCCCCeEEEEeC-----------CCCEEEeeCCCCccceeecCC
Confidence 99999995 5 7888998 99876 79999999 9999999987 999999999999999999999
Q ss_pred CCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCC-CEEEEEcCCCcEEEccC
Q 011970 411 NCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEER-NEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg-~~LaSgs~DgtVklWd~ 474 (474)
.. .|++++|+||| +.|++|+.|++|+|||.
T Consensus 305 ~~----------------------------------~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 305 GN----------------------------------WCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp SS----------------------------------CCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred CC----------------------------------ceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 86 89999999999 89999999999999984
No 65
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.1e-40 Score=339.28 Aligned_cols=273 Identities=11% Similarity=0.117 Sum_probs=231.1
Q ss_pred EEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeee-ccccCceEEEEeCCCCeEEEEecCCCcE
Q 011970 132 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIY 210 (474)
Q Consensus 132 i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s~D~ti 210 (474)
+..|+||++| .||.+. | .+|+|||+.+|++.. +++. ++..+|.+|+|+ |||++||+|+.|++|
T Consensus 108 ~~~l~wS~~n-~lAvgl-----d------~tV~lWd~~tg~~~~---~~~~~~~~~~V~sv~fs-pdg~~lasgs~Dg~v 171 (420)
T 4gga_A 108 LNLVDWSSGN-VLAVAL-----D------NSVYLWSASSGDILQ---LLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEV 171 (420)
T ss_dssp CBCEEECTTS-EEEEEE-----T------TEEEEEETTTCCEEE---EEECCSTTCCEEEEEEC-TTSSEEEEEETTSCE
T ss_pred ceeEEECCCC-EEEEEe-----C------CEEEEEECCCCCEEE---EEEecCCCCcEEEEEEC-CCCCEEEEEECCCeE
Confidence 5679999875 676532 3 599999999999744 3332 345678899998 799999999999999
Q ss_pred EEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEecCCCCccEEEEecCCC-eEEEEEeecCcceeEEEEEecCCCeEE
Q 011970 211 KVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDG-TVLKVFYHLLHRNKKVDFIEQFNEKLL 287 (474)
Q Consensus 211 KlWdl~tg~~l~tl~~--~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG-~~L~tl~~h~~~v~~V~F~~~~~~~ll 287 (474)
+|||+++++++.++.+ ..|.++++++ ..|+++ +.|+++++||..+. ..+.++.+|...+..+.|. +++..++
T Consensus 172 ~iWd~~~~~~~~~~~~h~~~v~~~s~~~-~~l~sg---s~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~-~~g~~l~ 246 (420)
T 4gga_A 172 QLWDVQQQKRLRNMTSHSARVGSLSWNS-YILSSG---SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA-PDGRHLA 246 (420)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEET-TEEEEE---ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSEEE
T ss_pred EEEEcCCCcEEEEEeCCCCceEEEeeCC-CEEEEE---eCCCceeEeeecccceeeEEecccccceeeeeec-CCCCeee
Confidence 9999999999999875 4677777764 456655 45899999998864 5678899999999999987 6788888
Q ss_pred EEeCCCcEEEEECCCCce----EEeccccCCceEEEEEcCCC-cEEEE--Ec-CCcEEEEeCC-CcEEEEeccCCCCcCC
Q 011970 288 VKQENENLQILDVRNAEL----MEVSRTEFMTPSAFIFLYEN-QLFLT--FR-NRTVAVWNFR-GELVTSFEDHLLWHPD 358 (474)
Q Consensus 288 ~~~~D~tIkIWDv~tg~~----~~~l~~h~~~v~sv~Fspdg-~llaS--~s-D~tIklWd~~-G~ll~tl~gH~~~~~~ 358 (474)
+++.|+.|+|||+.+++. +.....|...|.+++|+|++ .++++ ++ |++|+|||+. |+++..+..|..
T Consensus 247 s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~---- 322 (420)
T 4gga_A 247 SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ---- 322 (420)
T ss_dssp EEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC----
T ss_pred eeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc----
Confidence 899999999999998763 46678899999999999854 55555 35 9999999995 999999988765
Q ss_pred CCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccccccccccc
Q 011970 359 CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIR 438 (474)
Q Consensus 359 ~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (474)
+.++.|+|+++.|++++. +.|++|+|||+.+++++++|+||+.
T Consensus 323 --v~~~~~~~~~~~lv~~sg---------~~d~~I~iwd~~~~~~v~~l~gH~~-------------------------- 365 (420)
T 4gga_A 323 --VCSILWSPHYKELISGHG---------FAQNQLVIWKYPTMAKVAELKGHTS-------------------------- 365 (420)
T ss_dssp --EEEEEEETTTTEEEEEEC---------TTTCCEEEEETTTCCEEEEECCCSS--------------------------
T ss_pred --eeeeeecCCCCeEEEEEe---------cCCCEEEEEECCCCcEEEEEcCCCC--------------------------
Confidence 689999999999998762 3599999999999999999999996
Q ss_pred ccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 439 STVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 439 ~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++|+|||||++|||||.|++|||||.
T Consensus 366 --------~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 366 --------RVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp --------CEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred --------CEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 8999999999999999999999999984
No 66
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-40 Score=336.25 Aligned_cols=284 Identities=12% Similarity=0.146 Sum_probs=219.1
Q ss_pred cccEEEEEee--ccEEEEeeCCC-------eEEeeeccccce----------eeEeecCCCceEEEEEEeeCCCEEEEEE
Q 011970 88 RTKVIEIVAA--RDIVFALAHSG-------VCAAFSRETNRR----------ICFLNVSPDEVIRSLFYNKNNDSLITVS 148 (474)
Q Consensus 88 ~~~V~~i~~s--~~~las~s~dg-------tiklW~~~tg~~----------l~~l~g~~~~~i~sv~fspdg~~Lis~S 148 (474)
..||+++.|+ +.+||+|+.|. .|++|++..+.. -.+|.+ |+..|.++++ +++.|+++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~-~~~~v~s~~~--~~~~~~~g~ 90 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALED-NDDSPTAIDA--SKGIILVGC 90 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCT-TSCCCCEEEE--ETTEEEEEC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccC-CCCceEEEEe--CCCEEEEEE
Confidence 3468888888 89999997654 499999876542 124665 6677887765 566777654
Q ss_pred ee-------cCCCccceeeeEEEEeEeccCCCCC----ccceeee-ccccCceEEEEeCCCCeEEE--EecCCCcEEEee
Q 011970 149 VY-------ASDNFSSLKCRSTKIEYIRRGKPDS----GFALFES-ESLKWPGFVEFDDVNGKVLT--YSAQDSIYKVFD 214 (474)
Q Consensus 149 ~~-------~s~d~s~Lk~~~~~iw~i~~G~~~~----~~~lf~~-~~~~~~~~V~Fs~~nGk~La--S~s~D~tiKlWd 214 (474)
.+ ++.| .++|+|++..++... ...+... .+-.++..|+|| |||++|| +++.|++|||||
T Consensus 91 ~~~~~~l~s~~~d------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fS-pDg~~la~as~~~d~~i~iwd 163 (365)
T 4h5i_A 91 NENSTKITQGKGN------KHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYIS-REGTVAAIASSKVPAIMRIID 163 (365)
T ss_dssp CCCHHHHHHTSCC------CCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEEC-TTSSCEEEEESCSSCEEEEEE
T ss_pred CCCccEEEEecCC------CcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEc-CCCCEEEEEECCCCCEEEEeE
Confidence 22 2344 678999986654311 0011111 123457789998 7999875 566899999999
Q ss_pred cCCCeEEEEEc-CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEE--eecCcceeEEEEEecCCCeEEEEeC
Q 011970 215 LKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF--YHLLHRNKKVDFIEQFNEKLLVKQE 291 (474)
Q Consensus 215 l~tg~~l~tl~-~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl--~~h~~~v~~V~F~~~~~~~ll~~~~ 291 (474)
++++++++++. ...|.+|+|||++.++++. + +..+++|+..+|+++... .+|...+.+|+|+ |++..+++++.
T Consensus 164 ~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~--s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs-pdg~~l~~~s~ 239 (365)
T 4h5i_A 164 PSDLTEKFEIETRGEVKDLHFSTDGKVVAYI--T-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFI-ADDTVLIAASL 239 (365)
T ss_dssp TTTTEEEEEEECSSCCCEEEECTTSSEEEEE--C-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEE-ETTEEEEEEEE
T ss_pred CCCCcEEEEeCCCCceEEEEEccCCceEEec--c-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEc-CCCCEEEEEec
Confidence 99999999886 5689999999966555543 2 457888888899887543 4688889999998 56778888887
Q ss_pred CC----cEEEEECCCCce----EEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEe-ccCCCCcCCCC
Q 011970 292 NE----NLQILDVRNAEL----MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF-EDHLLWHPDCN 360 (474)
Q Consensus 292 D~----tIkIWDv~tg~~----~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl-~gH~~~~~~~~ 360 (474)
|+ ++++||+..+.. ...+.+|...|++++|||||++||+++ |++|+|||++ |+++.++ ++|..+
T Consensus 240 d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~----- 314 (365)
T 4h5i_A 240 KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFA----- 314 (365)
T ss_dssp SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSC-----
T ss_pred CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCC-----
Confidence 76 789999988764 345788999999999999999999999 9999999995 9999885 899987
Q ss_pred eeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCC
Q 011970 361 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG 401 (474)
Q Consensus 361 v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG 401 (474)
|++|+|||||++|||+|. |+|||||||.+.
T Consensus 315 V~~v~fSpdg~~laS~S~-----------D~tvrvw~ip~~ 344 (365)
T 4h5i_A 315 ITEVTISPDSTYVASVSA-----------ANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEECTTSCEEEEEET-----------TSEEEEEECCTT
T ss_pred EEEEEECCCCCEEEEEeC-----------CCeEEEEEcCCC
Confidence 799999999999999987 999999999643
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-40 Score=325.16 Aligned_cols=299 Identities=13% Similarity=0.081 Sum_probs=234.3
Q ss_pred CCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCC--CCCccceeeeccccCceEEEEeCCCCeEEEEec
Q 011970 128 PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGK--PDSGFALFESESLKWPGFVEFDDVNGKVLTYSA 205 (474)
Q Consensus 128 ~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~--~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s 205 (474)
|.+.|.+++|+|||+.|++++ .| ..++||++..++ +.. .+. ++...+..++|+ |+|++|++++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~----~d------~~v~i~~~~~~~~~~~~---~~~-~h~~~v~~~~~~-~~~~~l~~~~ 71 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICP----NN------HEVHIYEKSGNKWVQVH---ELK-EHNGQVTGVDWA-PDSNRIVTCG 71 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEEC----SS------SEEEEEEEETTEEEEEE---EEE-CCSSCEEEEEEE-TTTTEEEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEe----CC------CEEEEEeCCCCcEEeee---eec-CCCCcccEEEEe-CCCCEEEEEc
Confidence 678899999999999999854 45 699999998886 322 222 245567799998 7999999999
Q ss_pred CCCcEEEeecCCCeEEEEE----cCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe---EEEEE-eecCcceeEE
Q 011970 206 QDSIYKVFDLKNYTMLYSI----SDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT---VLKVF-YHLLHRNKKV 276 (474)
Q Consensus 206 ~D~tiKlWdl~tg~~l~tl----~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~---~L~tl-~~h~~~v~~V 276 (474)
.|++|++||+.++++...+ +...|.+++|+| +.+|+++ +.|+.|++||+++++ ++..+ .+|...+.++
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~ 148 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVG---SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL 148 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEE---ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEE
T ss_pred CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEE---eCCCEEEEEEecCCCcceeeeeeecccCCCeeEE
Confidence 9999999999999866554 246899999998 5566665 447899999999987 34444 4678899999
Q ss_pred EEEecCCCeEEEEeCCCcEEEEEC------------------CCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEE
Q 011970 277 DFIEQFNEKLLVKQENENLQILDV------------------RNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVA 337 (474)
Q Consensus 277 ~F~~~~~~~ll~~~~D~tIkIWDv------------------~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIk 337 (474)
+|+ |++..+++++.|++|++||+ .+++++..+.+|...+.+++|+|++++|++++ |++|+
T Consensus 149 ~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 227 (372)
T 1k8k_C 149 DWH-PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVC 227 (372)
T ss_dssp EEC-TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEE
T ss_pred EEc-CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEE
Confidence 998 56788888999999999995 47899999999999999999999999999999 99999
Q ss_pred EEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCC--C--eEEEEecCCCC
Q 011970 338 VWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT--G--KCLAKINATNC 412 (474)
Q Consensus 338 lWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~t--G--~cl~tl~gH~~ 412 (474)
+||++ ++++.++.+|... |.+++|+|||++|+++ . |++|+|||+.+ | +++.++..+..
T Consensus 228 i~d~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~-~-----------d~~i~i~~~~~~~~~~~~~~~~~~~~~ 290 (372)
T 1k8k_C 228 LADADKKMAVATLASETLP-----LLAVTFITESSLVAAG-H-----------DCFPVLFTYDSAAGKLSFGGRLDVPKQ 290 (372)
T ss_dssp EEEGGGTTEEEEEECSSCC-----EEEEEEEETTEEEEEE-T-----------TSSCEEEEEETTTTEEEECCCCCCC--
T ss_pred EEECCCCceeEEEccCCCC-----eEEEEEecCCCEEEEE-e-----------CCeEEEEEccCcCceEEEeeccCcccc
Confidence 99995 9999999999876 7899999999999987 4 99999999987 6 45555444332
Q ss_pred CCCCccccCCCCCCccccccccc---ccc----------ccc-cccccCEEEEE-EcCCC---CEEEEEcCCCcEEEcc
Q 011970 413 SPKVDDELGSSSTGKSKKLNKSS---YIR----------STV-GEALEDITSLF-YDEER---NEIYTGNRHGLVHVWS 473 (474)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~---~~~----------~~~-~~~l~~V~sla-fSpDg---~~LaSgs~DgtVklWd 473 (474)
.+... .....++ +.. ... ..+...|++|+ +++|| +.|+||+.||+|++||
T Consensus 291 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 291 SSQRG-----------LTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp -----------------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred chhhh-----------cchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 00000 0000000 000 011 13345899998 55888 9999999999999997
No 68
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.2e-40 Score=341.44 Aligned_cols=271 Identities=14% Similarity=0.154 Sum_probs=213.9
Q ss_pred ccEEEEeeCCCeEEeeecccc---ceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCC
Q 011970 98 RDIVFALAHSGVCAAFSRETN---RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD 174 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg---~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~ 174 (474)
++.-+..+-..+|+||+..++ ++++++++ |+.+|..|+|+||---|+.+ .-|++
T Consensus 53 ~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~---------------------~~~~~- 109 (356)
T 2w18_A 53 KEPCIITACEDVVSLWKALDAWQWEKLYTWHF-AEVPVLQIVPVPDVYNLVCV---------------------ALGNL- 109 (356)
T ss_dssp CEEEEEEEESSEEEEEEESSSSBEEEEEEEEC-CSSCEEEECCCTTCCSCEEE---------------------EECSS-
T ss_pred CccEEEEeccceEEEcccCCCccceeeEEEec-cCceeEEEEEcCcccceeee---------------------eeccc-
Confidence 555555555679999999999 89999998 87899999999998777663 23554
Q ss_pred CccceeeeccccCceEEEEeCCC----CeEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEecCCCCc
Q 011970 175 SGFALFESESLKWPGFVEFDDVN----GKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHV 250 (474)
Q Consensus 175 ~~~~lf~~~~~~~~~~V~Fs~~n----Gk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSpg~~la~~s~~s~D~ 250 (474)
+...+.+|+|+ || |++|++++.+ ++||++.+|+++.+ +..+.|+
T Consensus 110 ---------~~~~v~sla~s-pd~~~~~~~l~s~g~~--~~v~~l~~g~lv~s--------------------s~~g~d~ 157 (356)
T 2w18_A 110 ---------EIREIRALFCS-SDDESEKQVLLKSGNI--KAVLGLTKRRLVSS--------------------SGTLSDQ 157 (356)
T ss_dssp ---------SEEEEEEECC-------CCEEEEEEEEE--EEEEEETTTEEEEE--------------------ESSSTTC
T ss_pred ---------cccceEEEEEC-CCccccccEEEeCCCe--EEEEecCCCcEEEe--------------------cccCCCC
Confidence 13456699998 79 9999998844 88998766554433 2234578
Q ss_pred cEEEEec-CCCeEEEEEeecCcceeEEEEEe-c-CCCeEEEEeCCCcEEEEECCCCceEEeccccC---CceEEEEEcCC
Q 011970 251 PLKILSI-EDGTVLKVFYHLLHRNKKVDFIE-Q-FNEKLLVKQENENLQILDVRNAELMEVSRTEF---MTPSAFIFLYE 324 (474)
Q Consensus 251 tIkLWdi-~tG~~L~tl~~h~~~v~~V~F~~-~-~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~---~~v~sv~Fspd 324 (474)
+|++|++ ++|+.+.++.+|...+..++|++ + +++.|++++.|+||||||+++|++++++.+|. ..+..++|+||
T Consensus 158 ~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpd 237 (356)
T 2w18_A 158 QVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEM 237 (356)
T ss_dssp EEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEET
T ss_pred cEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCC
Confidence 9999999 67999999999999999999986 3 34677778999999999999999999998654 36777899999
Q ss_pred CcEE------------EEEc-CCcEEEEeCC-CcEEEEe-----ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCcccc
Q 011970 325 NQLF------------LTFR-NRTVAVWNFR-GELVTSF-----EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQW 385 (474)
Q Consensus 325 g~ll------------aS~s-D~tIklWd~~-G~ll~tl-----~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~ 385 (474)
|+++ +|++ |+|||+||.. |+++.++ .||... +.+.. .+|.++||++.
T Consensus 238 G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~-----~lsg~--~sg~~lASgS~------- 303 (356)
T 2w18_A 238 GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR-----FLEGD--VKDHCAAAILT------- 303 (356)
T ss_dssp TEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC-----EEEEE--EETTEEEEEET-------
T ss_pred CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce-----eEccc--cCCCEEEEEcC-------
Confidence 9987 5677 9999999995 9998877 477654 23333 34899999987
Q ss_pred ccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcC
Q 011970 386 MEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR 465 (474)
Q Consensus 386 ~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~ 465 (474)
|+||||||+.+|+|+++|++|.. ..+.+|+|||||++||||+.
T Consensus 304 ----DgTIkIWDl~tGk~l~tL~gH~~---------------------------------~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 304 ----SGTIAIWDLLLGQCTALLPPVSD---------------------------------QHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp ----TSCEEEEETTTCSEEEEECCC-----------------------------------CCCCEEEECSSSSEEEEECT
T ss_pred ----CCcEEEEECCCCcEEEEecCCCC---------------------------------CeEEEEEECCCCCEEEEEEC
Confidence 99999999999999999999985 03446999999999999999
Q ss_pred CCcEEEccC
Q 011970 466 HGLVHVWSN 474 (474)
Q Consensus 466 DgtVklWd~ 474 (474)
|++|||||.
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 999999983
No 69
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.4e-41 Score=337.20 Aligned_cols=272 Identities=10% Similarity=0.101 Sum_probs=226.3
Q ss_pred EEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEE
Q 011970 132 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYK 211 (474)
Q Consensus 132 i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiK 211 (474)
+.+++|+|+|+.|++++. | ..+++|++.+++.... +.. + ..+....|+ |+|++||+|+.|++|+
T Consensus 59 ~~~~~~s~~g~~l~~~~~----d------~~v~i~d~~~~~~~~~---~~~-~-~~~~~~~~~-~~~~~l~~~~~dg~i~ 122 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARL----D------GHDFLFNTIIRDGSKM---LKR-A-DYTAVDTAK-LQMRRFILGTTEGDIK 122 (420)
T ss_dssp CTTCEEEEEETTEEEEEE----T------TEEEEEECCSEETTTT---SCS-C-CEEEEEEEC-SSSCEEEEEETTSCEE
T ss_pred ccceeeeecCCeEEEEEc----C------CcEEEEEecccceeeE---Eec-C-CceEEEEEe-cCCCEEEEEECCCCEE
Confidence 457999999999999774 3 5899999988876432 221 1 222244676 8999999999999999
Q ss_pred EeecCCCeEEEEEc--CCcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEE
Q 011970 212 VFDLKNYTMLYSIS--DKHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV 288 (474)
Q Consensus 212 lWdl~tg~~l~tl~--~~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~ 288 (474)
|||+++++++..+. ...|.+++|+|+ ..|+++ +.|++|+|||+++|+++.++.+|...+.+++|+ |++..|++
T Consensus 123 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~---s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~s 198 (420)
T 3vl1_A 123 VLDSNFNLQREIDQAHVSEITKLKFFPSGEALISS---SQDMQLKIWSVKDGSNPRTLIGHRATVTDIAII-DRGRNVLS 198 (420)
T ss_dssp EECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEE---ETTSEEEEEETTTCCCCEEEECCSSCEEEEEEE-TTTTEEEE
T ss_pred EEeCCCcceeeecccccCccEEEEECCCCCEEEEE---eCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEc-CCCCEEEE
Confidence 99999999988864 568999999985 456655 458999999999999999999999999999998 57888999
Q ss_pred EeCCCcEEEEECCCCceEEeccc---cCCceEE---------------------EEEcCCCcEEEEEc-CCcEEEEeCC-
Q 011970 289 KQENENLQILDVRNAELMEVSRT---EFMTPSA---------------------FIFLYENQLFLTFR-NRTVAVWNFR- 342 (474)
Q Consensus 289 ~~~D~tIkIWDv~tg~~~~~l~~---h~~~v~s---------------------v~Fspdg~llaS~s-D~tIklWd~~- 342 (474)
++.|++|+|||+++++++..+.. |...+.+ ++|+|+|++|++++ |++|++||++
T Consensus 199 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 199 ASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp EETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT
T ss_pred EcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 99999999999999999988765 3344444 44579999999999 9999999995
Q ss_pred CcEEEEec-cCCCCcCCCCeeEEEECCCCC-EEEEEecCCCccccccCCCCeEEEEeCCCCeE-EEEecCCCCCCCCccc
Q 011970 343 GELVTSFE-DHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSAGSINVSSILTGKC-LAKINATNCSPKVDDE 419 (474)
Q Consensus 343 G~ll~tl~-gH~~~~~~~~v~svafSpDg~-~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c-l~tl~gH~~~~~~~~~ 419 (474)
++.+..+. +|... |.+++|+|+|+ +|++++. ||+|+|||+.++++ +.++.+|..
T Consensus 279 ~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~g~~-----------dg~i~vwd~~~~~~~~~~~~~~~~------- 335 (420)
T 3vl1_A 279 KEQTIQLPSKFTCS-----CNSLTVDGNNANYIYAGYE-----------NGMLAQWDLRSPECPVGEFLINEG------- 335 (420)
T ss_dssp CCEEEEECCTTSSC-----EEEEEECSSCTTEEEEEET-----------TSEEEEEETTCTTSCSEEEEESTT-------
T ss_pred CceeEEcccccCCC-----ceeEEEeCCCCCEEEEEeC-----------CCeEEEEEcCCCcCchhhhhccCC-------
Confidence 88777665 46665 79999999999 9999986 99999999999865 889988653
Q ss_pred cCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 420 LGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
..|++++| |+|+.|+||+.|++|+||+
T Consensus 336 --------------------------~~v~~~~~-~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 336 --------------------------TPINNVYF-AAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp --------------------------SCEEEEEE-ETTEEEEEETTTEEEEEEE
T ss_pred --------------------------CCceEEEe-CCCCEEEEecCCccEEEEe
Confidence 17888855 5889999999999999998
No 70
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-40 Score=317.69 Aligned_cols=285 Identities=11% Similarity=0.062 Sum_probs=243.9
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
|..+|..+.|+ +++||+++.||+|++||+.+++++.++.+ |...|.+++|+|+|+.|++++ .| .+++
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~----~d------g~i~ 99 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTKYCVTGS----AD------YSIK 99 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE----TT------TEEE
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCCEEEEEe----CC------CeEE
Confidence 67777777777 89999999999999999999999999997 778999999999999999976 45 6999
Q ss_pred EeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCC-----CcEEEeecCCCeEE-----------EEEc--C
Q 011970 165 IEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-----SIYKVFDLKNYTML-----------YSIS--D 226 (474)
Q Consensus 165 iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D-----~tiKlWdl~tg~~l-----------~tl~--~ 226 (474)
||++.++++... +. +...+..++|+ |+|++|++++.| ++|++||+.++... ..+. .
T Consensus 100 iwd~~~~~~~~~---~~--~~~~v~~~~~~-~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 100 LWDVSNGQCVAT---WK--SPVPVKRVEFS-PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp EEETTTCCEEEE---EE--CSSCEEEEEEC-TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred EEECCCCcEEEE---ee--cCCCeEEEEEc-cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 999999987442 33 23456789998 799999999999 99999999866421 1221 2
Q ss_pred C--cEEEEEEcCC-ceEEEEecCCCCccEEEEecCC-CeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCC
Q 011970 227 K--HVQEIKISPG-IMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN 302 (474)
Q Consensus 227 ~--~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~t-G~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~t 302 (474)
. .|..++|+|+ ..|+++ +.|+.|++||+.+ ++++.++..|...+..++|+ |++..|++++.|++|++||+++
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAG---HKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS-PDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEE---ETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTT
T ss_pred CccceeEEEEcCCCCEEEEE---cCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC-CCCCEEEEecCCceEEEEECCC
Confidence 2 8999999985 455554 4478999999999 89999999999999999998 5788888899999999999999
Q ss_pred CceEEeccccCCceEEEEEcCCCcEEEEEc-CC--------------cEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEE
Q 011970 303 AELMEVSRTEFMTPSAFIFLYENQLFLTFR-NR--------------TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYI 366 (474)
Q Consensus 303 g~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~--------------tIklWd~~-G~ll~tl~gH~~~~~~~~v~svaf 366 (474)
++++..+. +...+..++|+|+++++++++ ++ +|++||.. ++++.++.+|... |.+++|
T Consensus 250 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----v~~~~~ 323 (369)
T 3zwl_B 250 LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGP-----LNTVAI 323 (369)
T ss_dssp CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSC-----EEEEEE
T ss_pred Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCc-----EEEEEE
Confidence 99998877 667899999999999999998 77 89999995 9999999999887 799999
Q ss_pred CCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecC
Q 011970 367 TSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 409 (474)
Q Consensus 367 SpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~g 409 (474)
+|||++||+++. ||+|+|||+.++....++..
T Consensus 324 s~~~~~l~s~~~-----------dg~v~iw~~~~~~~~~~~~~ 355 (369)
T 3zwl_B 324 SPQGTSYASGGE-----------DGFIRLHHFEKSYFDFKYDV 355 (369)
T ss_dssp CTTSSEEEEEET-----------TSEEEEEEECHHHHTCCCHH
T ss_pred CCCCCEEEEEcC-----------CCeEEEEECccccchhHHHH
Confidence 999999999987 99999999988776554433
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.7e-41 Score=333.84 Aligned_cols=236 Identities=13% Similarity=0.143 Sum_probs=201.5
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcC---CceEEEEecCCCCccEEEEe
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLKILS 256 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~--~l~tl~--~~~V~~vafSp---g~~la~~s~~s~D~tIkLWd 256 (474)
|...|.+|+|+ |||++||+|+.|++|||||+.+++ ++.++. ...|++|+|+| +.+||++ +.|++|+|||
T Consensus 12 H~~~V~~v~~s-~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~---s~D~~v~iWd 87 (316)
T 3bg1_A 12 HEDMIHDAQMD-YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASC---SYDRKVIIWR 87 (316)
T ss_dssp --CCEEEEEEC-GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEE---ETTSCEEEEC
T ss_pred ccCeEEEeeEc-CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEE---ECCCEEEEEE
Confidence 45677799998 799999999999999999999885 466775 46899999984 6778776 4589999999
Q ss_pred cCCC--eEEEEEeecCcceeEEEEEecC-CCeEEEEeCCCcEEEEECCCCc---eEEeccccCCceEEEEEcCC------
Q 011970 257 IEDG--TVLKVFYHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNAE---LMEVSRTEFMTPSAFIFLYE------ 324 (474)
Q Consensus 257 i~tG--~~L~tl~~h~~~v~~V~F~~~~-~~~ll~~~~D~tIkIWDv~tg~---~~~~l~~h~~~v~sv~Fspd------ 324 (474)
+++| +++.++.+|...|.+|+|+|.. +..|++++.|++|+|||++++. +...+.+|...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 9998 4778888999999999998542 5677888999999999999863 24567889999999999998
Q ss_pred -----------CcEEEEEc-CCcEEEEeCC-C---cEEEEeccCCCCcCCCCeeEEEECCCC----CEEEEEecCCCccc
Q 011970 325 -----------NQLFLTFR-NRTVAVWNFR-G---ELVTSFEDHLLWHPDCNTNNIYITSDQ----DLIISYCKAEPEDQ 384 (474)
Q Consensus 325 -----------g~llaS~s-D~tIklWd~~-G---~ll~tl~gH~~~~~~~~v~svafSpDg----~~LaS~s~~~~~~~ 384 (474)
+++|+|++ |++|+|||++ + +++.+|++|..+ |++|+|+|++ ++|||++.
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~-----V~~v~~sp~~~~~~~~las~s~------ 236 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW-----VRDVAWAPSIGLPTSTIASCSQ------ 236 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC-----EEEEECCCCSSCSCCEEEEEET------
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc-----eEEEEecCCCCCCCceEEEEcC------
Confidence 47899999 9999999996 4 478899999988 7999999997 89999987
Q ss_pred cccCCCCeEEEEeCCCC---e-EEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEE
Q 011970 385 WMEGSAGSINVSSILTG---K-CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEI 460 (474)
Q Consensus 385 ~~~s~DgtIklWdi~tG---~-cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~L 460 (474)
|++|+|||+.++ + +...+.+|.. .|++|+|+|||+.|
T Consensus 237 -----D~~v~iw~~~~~~~~~~~~~~~~~~~~----------------------------------~v~~v~~sp~g~~l 277 (316)
T 3bg1_A 237 -----DGRVFIWTCDDASSNTWSPKLLHKFND----------------------------------VVWHVSWSITANIL 277 (316)
T ss_dssp -----TCEEEEEECSSTTCCCCBCCEEEECSS----------------------------------CEEEEEECTTTCCE
T ss_pred -----CCeEEEEEccCccccchhhhhhhcCCC----------------------------------cEEEEEEcCCCCEE
Confidence 999999998762 2 2345667764 89999999999999
Q ss_pred EEEcCCCcEEEcc
Q 011970 461 YTGNRHGLVHVWS 473 (474)
Q Consensus 461 aSgs~DgtVklWd 473 (474)
|+|+.|++|+||+
T Consensus 278 as~~~D~~v~lw~ 290 (316)
T 3bg1_A 278 AVSGGDNKVTLWK 290 (316)
T ss_dssp EEEESSSCEEEEE
T ss_pred EEEcCCCeEEEEE
Confidence 9999999999997
No 72
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-39 Score=308.76 Aligned_cols=280 Identities=13% Similarity=0.183 Sum_probs=229.4
Q ss_pred ccccEEEEEee-ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEE
Q 011970 87 KRTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (474)
Q Consensus 87 ~~~~V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~i 165 (474)
|..+|..|.|. +++||+++.||+|++||+.+++.+..+.+ |...|.+++|+|+|+.|++++ .| ..+++
T Consensus 17 h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~----~d------g~i~~ 85 (313)
T 3odt_A 17 HDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYT-GQGFLNSVCYDSEKELLLFGG----KD------TMING 85 (313)
T ss_dssp CSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEE-CSSCEEEEEEETTTTEEEEEE----TT------SCEEE
T ss_pred CCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeec-CCccEEEEEECCCCCEEEEec----CC------CeEEE
Confidence 33444444444 88999999999999999999999999986 778999999999999999976 44 57889
Q ss_pred eEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC--CceEE
Q 011970 166 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP--GIMLL 241 (474)
Q Consensus 166 w~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp--g~~la 241 (474)
|++...........+. .+...+..++|+ +++|++++.|++|++|| +++++..+. ...|.+++|+| +..++
T Consensus 86 ~~~~~~~~~~~~~~~~-~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 86 VPLFATSGEDPLYTLI-GHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EETTCCTTSCC-CEEC-CCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEeeecCCCCcccchh-hcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 9986654322111222 245566788884 67999999999999999 677777665 57899999996 66666
Q ss_pred EEecCCCCccEEEEecCCCeEEEEEee-cCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEE
Q 011970 242 IFNRSSSHVPLKILSIEDGTVLKVFYH-LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFI 320 (474)
Q Consensus 242 ~~s~~s~D~tIkLWdi~tG~~L~tl~~-h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~ 320 (474)
++ +.|+.|++|| .++.+.++.. |...+..++|++ ++.+++++.|++|++||+++++++..+.+|...+.+++
T Consensus 160 ~~---~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~ 232 (313)
T 3odt_A 160 TA---SADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVD--DGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIK 232 (313)
T ss_dssp EE---ETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EE---ECCCCEEEEe--cCceEEEEeccCcccEEEEEEcC--CCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEE
Confidence 65 4578999999 6788999987 889999999985 34588899999999999999999999999999999999
Q ss_pred EcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeC
Q 011970 321 FLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI 398 (474)
Q Consensus 321 Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi 398 (474)
|+|+|+ |++++ |++|++||+. ++++.++..|... |.+++|+|||++++ ++. ||+|+|||+
T Consensus 233 ~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~~~-~~~-----------dg~i~iw~~ 294 (313)
T 3odt_A 233 LLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAIS-----IWSVDCMSNGDIIV-GSS-----------DNLVRIFSQ 294 (313)
T ss_dssp ECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSSC-----EEEEEECTTSCEEE-EET-----------TSCEEEEES
T ss_pred EecCCC-EEEEecCCEEEEEECCCCceeEEEeccCce-----EEEEEEccCCCEEE-EeC-----------CCcEEEEeC
Confidence 999995 66666 9999999995 9999999999876 79999999999654 554 999999999
Q ss_pred CCCeEEEEec
Q 011970 399 LTGKCLAKIN 408 (474)
Q Consensus 399 ~tG~cl~tl~ 408 (474)
.+++++....
T Consensus 295 ~~~~~~~~~~ 304 (313)
T 3odt_A 295 EKSRWASEDE 304 (313)
T ss_dssp CGGGCCC---
T ss_pred CCCceeehhh
Confidence 9998876553
No 73
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.6e-40 Score=354.82 Aligned_cols=280 Identities=12% Similarity=0.128 Sum_probs=231.1
Q ss_pred ccccEEEEEee---ccEEEEeeCCCeEEeeeccc-----cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccce
Q 011970 87 KRTKVIEIVAA---RDIVFALAHSGVCAAFSRET-----NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSL 158 (474)
Q Consensus 87 ~~~~V~~i~~s---~~~las~s~dgtiklW~~~t-----g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~L 158 (474)
|...|..|.++ +++|+++|.||+|++|++.+ +.+.+.+.+ |...|.+|+|+|+|+.|+|+| .|
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs----~D---- 451 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGS----WD---- 451 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEE----TT----
T ss_pred CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCCEEEEEe----CC----
Confidence 45555666665 47999999999999999876 456678887 788999999999999999976 55
Q ss_pred eeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc------CCcEEEE
Q 011970 159 KCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS------DKHVQEI 232 (474)
Q Consensus 159 k~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~------~~~V~~v 232 (474)
++++|||+.+|++... +. +|...+.+|+|+ |+|++|++|+.|++|||||+.. .+..++. ...|.++
T Consensus 452 --g~v~vwd~~~~~~~~~---~~-~h~~~v~~~~~s-~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 452 --GELRLWDLAAGVSTRR---FV-GHTKDVLSVAFS-LDNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp --SEEEEEETTTTEEEEE---EE-CCSSCEEEEEEC-TTSSCEEEEETTSCEEEECTTS-CEEEEECSSTTSCSSCEEEE
T ss_pred --CcEEEEECCCCcceeE---Ee-CCCCCEEEEEEe-CCCCEEEEEeCCCEEEEEECCC-CcceeeccCCCCCCCcEEEE
Confidence 6999999999886331 22 245667799998 7999999999999999999854 4444442 3579999
Q ss_pred EEcCCc---eEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEec
Q 011970 233 KISPGI---MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS 309 (474)
Q Consensus 233 afSpg~---~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l 309 (474)
+|+|++ .++++ +.|++|+|||+++++++.++.+|...|.+|+|+ |++..|++++.|++|+|||+++++++..+
T Consensus 524 ~~~~~~~~~~l~s~---s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s-pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 524 RFSPNTLQPTIVSA---SWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS-PDGSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp EECSCSSSCEEEEE---ETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred EEeCCCCcceEEEE---eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 999854 56665 558999999999999999999999999999998 67888888999999999999999999887
Q ss_pred cccCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEEEeccCCCCc--------------CCCCeeEEEECCCCCEEE
Q 011970 310 RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWH--------------PDCNTNNIYITSDQDLII 374 (474)
Q Consensus 310 ~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~tl~gH~~~~--------------~~~~v~svafSpDg~~La 374 (474)
..+ ..+.+++|+|++.+|++++|+.|+|||++ ++++.++..|.... .-..+.+++|||||++|+
T Consensus 600 ~~~-~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~ 678 (694)
T 3dm0_A 600 EAN-SVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLF 678 (694)
T ss_dssp BCS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEE
T ss_pred cCC-CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEE
Confidence 765 47999999999999998888899999995 89998887543210 001257899999999999
Q ss_pred EEecCCCccccccCCCCeEEEEeCC
Q 011970 375 SYCKAEPEDQWMEGSAGSINVSSIL 399 (474)
Q Consensus 375 S~s~~~~~~~~~~s~DgtIklWdi~ 399 (474)
||+. ||+|+|||+.
T Consensus 679 sgs~-----------Dg~i~iW~i~ 692 (694)
T 3dm0_A 679 SGYT-----------DGVIRVWGIG 692 (694)
T ss_dssp EEET-----------TSEEEEEEC-
T ss_pred EEcC-----------CCeEEEEecc
Confidence 9987 9999999974
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.2e-40 Score=327.34 Aligned_cols=277 Identities=13% Similarity=0.144 Sum_probs=224.0
Q ss_pred ccccEEEEEee--c-cEEEEeeCCCeEEeeeccccceeeEeec-CCCceEEEEEEee-CCCEEEEEEeecCCCccceeee
Q 011970 87 KRTKVIEIVAA--R-DIVFALAHSGVCAAFSRETNRRICFLNV-SPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCR 161 (474)
Q Consensus 87 ~~~~V~~i~~s--~-~~las~s~dgtiklW~~~tg~~l~~l~g-~~~~~i~sv~fsp-dg~~Lis~S~~~s~d~s~Lk~~ 161 (474)
|...|.++.|+ + ++||+++.||+|++||+.+++..+.+.. .|...|.++.|+| +++.|++++ .| .
T Consensus 72 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----~d------~ 141 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS----IR------G 141 (383)
T ss_dssp CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE----TT------T
T ss_pred CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe----CC------C
Confidence 34455555555 6 7999999999999999999999988863 4889999999999 788999876 45 6
Q ss_pred EEEEeEeccCCCCCccceeee--ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCC
Q 011970 162 STKIEYIRRGKPDSGFALFES--ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPG 237 (474)
Q Consensus 162 ~~~iw~i~~G~~~~~~~lf~~--~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg 237 (474)
+++||++..+.. . .+.. .+...+..++|+ |+|++|++++.|++|++||+ +++++.++. ...|.+++|+|+
T Consensus 142 ~i~iwd~~~~~~-~---~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 142 ATTLRDFSGSVI-Q---VFAKTDSWDYWYCCVDVS-VSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp EEEEEETTSCEE-E---EEECCCCSSCCEEEEEEE-TTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSS
T ss_pred EEEEEECCCCce-E---EEeccCCCCCCeEEEEEC-CCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCC
Confidence 899999874332 2 2221 123557789998 79999999999999999999 678888875 468999999985
Q ss_pred c--eEEEEecCCCCccEEEEecCC----CeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc
Q 011970 238 I--MLLIFNRSSSHVPLKILSIED----GTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT 311 (474)
Q Consensus 238 ~--~la~~s~~s~D~tIkLWdi~t----G~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~ 311 (474)
+ +++++ +.|++|+|||+++ ++++.++ +|...+.+++|++.++..|++++.|++|+|||+++++++..+.+
T Consensus 216 ~~~~l~s~---~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 291 (383)
T 3ei3_B 216 CDWLMATS---SVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIII 291 (383)
T ss_dssp CTTEEEEE---ETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEE
T ss_pred CCCEEEEE---eCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccc
Confidence 5 56655 4589999999998 8899888 58899999999843788999999999999999999998777665
Q ss_pred cC-----------------CceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCE
Q 011970 312 EF-----------------MTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 372 (474)
Q Consensus 312 h~-----------------~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~ 372 (474)
|. ..+..++|+|||++ +++ |++|+|||+. |+++.++.+|... ..+..++|+|||++
T Consensus 292 ~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~---~~~~~~~~s~~g~~ 366 (383)
T 3ei3_B 292 HPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAA---GIISLNKFSPTGDV 366 (383)
T ss_dssp CCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBC---SCCCEEEECTTSSE
T ss_pred ccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCC---ceEEEEEEecCccE
Confidence 53 23445778888888 777 9999999995 9999999985421 12567899999999
Q ss_pred EEEEecCCCccccccCCCCeEEEEeCCC
Q 011970 373 IISYCKAEPEDQWMEGSAGSINVSSILT 400 (474)
Q Consensus 373 LaS~s~~~~~~~~~~s~DgtIklWdi~t 400 (474)
||+++ |++|+|||+.+
T Consensus 367 l~s~s------------d~~i~iw~~~~ 382 (383)
T 3ei3_B 367 LASGM------------GFNILIWNRED 382 (383)
T ss_dssp EEEEE------------TTEEEEEECC-
T ss_pred EEEec------------CCcEEEEecCC
Confidence 99984 89999999864
No 75
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.1e-40 Score=321.91 Aligned_cols=283 Identities=10% Similarity=0.115 Sum_probs=234.4
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccc--eeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeE
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRS 162 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~--~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~ 162 (474)
|..+|.++.|+ +++||+++.||++++|+..+++ ++.++.+ |...|.+++|+|+|+.|++++ .| +.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~----~d------g~ 75 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCG----TD------RN 75 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEE----TT------SC
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEc----CC------Ce
Confidence 44445555555 8999999999999999999988 9999996 778999999999999999976 45 68
Q ss_pred EEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe---EEEEEc---CCcEEEEEEcC
Q 011970 163 TKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSIS---DKHVQEIKISP 236 (474)
Q Consensus 163 ~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~---~l~tl~---~~~V~~vafSp 236 (474)
+++|++..+++.....+.. +...+..++|+ |+|++|++++.|++|++||+.+++ +...+. ...|.+++|+|
T Consensus 76 i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~~-~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVILR--INRAARCVRWA-PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp EEEEEEETTEEEEEEECCC--CSSCEEEEEEC-TTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred EEEEECCCCeeeeeEEeec--CCCceeEEEEC-CCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 9999998887533222222 34567789998 799999999999999999998876 234442 46899999998
Q ss_pred C-ceEEEEecCCCCccEEEEec------------------CCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEE
Q 011970 237 G-IMLLIFNRSSSHVPLKILSI------------------EDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQI 297 (474)
Q Consensus 237 g-~~la~~s~~s~D~tIkLWdi------------------~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkI 297 (474)
+ .+++++ +.|++|++||+ .+++++.++.+|...+..++|+ |++..|++++.|++|++
T Consensus 153 ~~~~l~~~---~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i 228 (372)
T 1k8k_C 153 NSVLLAAG---SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-ANGSRVAWVSHDSTVCL 228 (372)
T ss_dssp TSSEEEEE---ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SSSSEEEEEETTTEEEE
T ss_pred CCCEEEEE---cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC-CCCCEEEEEeCCCEEEE
Confidence 4 556655 44799999994 5799999999999999999998 57788999999999999
Q ss_pred EECCCCceEEeccccCCceEEEEEcCCCcEEEEEcCCcEEEEeC-C--Cc--EE--------------------------
Q 011970 298 LDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNF-R--GE--LV-------------------------- 346 (474)
Q Consensus 298 WDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~-~--G~--ll-------------------------- 346 (474)
||+++++++..+.+|...+.+++|+|++++|+++.|++|++||+ . |+ ++
T Consensus 229 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
T 1k8k_C 229 ADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKK 308 (372)
T ss_dssp EEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCC
T ss_pred EECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccc
Confidence 99999999999999999999999999999999988999999999 4 42 11
Q ss_pred ----------EEe-ccCCCCcCCCCeeEEE-ECCCC---CEEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 347 ----------TSF-EDHLLWHPDCNTNNIY-ITSDQ---DLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 347 ----------~tl-~gH~~~~~~~~v~sva-fSpDg---~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
..+ .+|... |++++ +++|| ++|+|++. ||+|+|||+.+++.
T Consensus 309 ~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~g~~~~~l~s~~~-----------Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 309 ASSEGSAAAGAGLDSLHKNS-----VSQISVLSGGKAKCSQFCTTGM-----------DGGMSIWDVRSLES 364 (372)
T ss_dssp C---------CCCSSSSSSC-----EEEEEEEESTTTSCSEEEEEET-----------TSEEEEEEHHHHHH
T ss_pred cccccCccccccccccccCC-----cceeEEecCCCcceeeEEEecC-----------CCceEEEEecChhH
Confidence 223 388776 78998 55888 99999987 99999999987654
No 76
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.1e-40 Score=319.69 Aligned_cols=278 Identities=12% Similarity=0.129 Sum_probs=231.9
Q ss_pred ccccEEEEEee------ccEEEEeeCCCeEEeeeccccceeeEeecC----CCceEEEEEEeeC----CCEEEEEEeecC
Q 011970 87 KRTKVIEIVAA------RDIVFALAHSGVCAAFSRETNRRICFLNVS----PDEVIRSLFYNKN----NDSLITVSVYAS 152 (474)
Q Consensus 87 ~~~~V~~i~~s------~~~las~s~dgtiklW~~~tg~~l~~l~g~----~~~~i~sv~fspd----g~~Lis~S~~~s 152 (474)
|..+|..|.|+ ...+++++.++.|++|+..+++.+..++.+ |.+.|.+++|+|+ |+.|++++
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~---- 92 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG---- 92 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE----
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec----
Confidence 56677777776 456777777789999999999998888753 4477999999999 66898866
Q ss_pred CCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE-----cCC
Q 011970 153 DNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-----SDK 227 (474)
Q Consensus 153 ~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl-----~~~ 227 (474)
.| .+++||++.++++... +. .+...+..++|+|.++++|++++.|++|+|||+.+++++..+ +..
T Consensus 93 ~d------g~i~v~d~~~~~~~~~---~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 93 SR------GIIRIINPITMQCIKH---YV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp TT------CEEEEECTTTCCEEEE---EE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS
T ss_pred CC------CEEEEEEchhceEeee---ec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC
Confidence 55 6999999999887432 22 245667799998339999999999999999999999999988 356
Q ss_pred cEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEee----------------------------cCcceeEEEE
Q 011970 228 HVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH----------------------------LLHRNKKVDF 278 (474)
Q Consensus 228 ~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~----------------------------h~~~v~~V~F 278 (474)
.|.+++|+| +..|+++ +.|++|++||+++++++.++.. |...+.+++|
T Consensus 163 ~v~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 239 (366)
T 3k26_A 163 EVLSADYDLLGEKIMSC---GMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRW 239 (366)
T ss_dssp CEEEEEECTTSSEEEEE---ETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEE
T ss_pred ceeEEEECCCCCEEEEe---cCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEE
Confidence 899999998 5566655 4479999999999887665554 8899999999
Q ss_pred EecCCCeEEEEeCCCcEEEEECCCCce--------------EEeccccCCceEEEEEcCC--CcEEEEEc-CCcEEEEeC
Q 011970 279 IEQFNEKLLVKQENENLQILDVRNAEL--------------MEVSRTEFMTPSAFIFLYE--NQLFLTFR-NRTVAVWNF 341 (474)
Q Consensus 279 ~~~~~~~ll~~~~D~tIkIWDv~tg~~--------------~~~l~~h~~~v~sv~Fspd--g~llaS~s-D~tIklWd~ 341 (474)
+ ++.+++++.|++|++||+.++++ +..+.+|...|++++|+|+ |++|++++ |++|++||+
T Consensus 240 ~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~ 316 (366)
T 3k26_A 240 L---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDL 316 (366)
T ss_dssp E---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEEC
T ss_pred c---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEEC
Confidence 7 67888899999999999998855 7788899999999999999 99999999 999999999
Q ss_pred C-Cc----EEEEeccC--CCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCC
Q 011970 342 R-GE----LVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT 400 (474)
Q Consensus 342 ~-G~----ll~tl~gH--~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~t 400 (474)
+ ++ .+.++.+| ... |++++|+|||++||+++. ||+|+|||+.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~s~~~-----------dg~i~iwd~~~ 366 (366)
T 3k26_A 317 EVEDPHKAKCTTLTHHKCGAA-----IRQTSFSRDSSILIAVCD-----------DASIWRWDRLR 366 (366)
T ss_dssp CSSSGGGCEEEEECCTTCCSC-----EEEEEECTTSSEEEEEET-----------TSEEEEEEC--
T ss_pred CCCCCccccceEEcccccCCc-----eEEEEeCCCCCeEEEEeC-----------CCEEEEEEecC
Confidence 5 65 55689998 444 799999999999999987 99999999854
No 77
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.9e-40 Score=322.33 Aligned_cols=290 Identities=12% Similarity=0.089 Sum_probs=222.5
Q ss_pred ccccEEEEEee---ccEEEEeeCCCeEEeeeccccceeeEee------------cCCCceEEEEEEee-CCCEEEEEEee
Q 011970 87 KRTKVIEIVAA---RDIVFALAHSGVCAAFSRETNRRICFLN------------VSPDEVIRSLFYNK-NNDSLITVSVY 150 (474)
Q Consensus 87 ~~~~V~~i~~s---~~~las~s~dgtiklW~~~tg~~l~~l~------------g~~~~~i~sv~fsp-dg~~Lis~S~~ 150 (474)
|..+|..+.|+ +++||+++.||+|++|++.+++.+..+. ..|...|.++.|+| +++.|++++
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-- 119 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS-- 119 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE--
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe--
Confidence 44555555554 7999999999999999999998877765 23788999999999 777898865
Q ss_pred cCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCC--CCeEEEEecCCCcEEEeecCCCeEEEEEc--C
Q 011970 151 ASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV--NGKVLTYSAQDSIYKVFDLKNYTMLYSIS--D 226 (474)
Q Consensus 151 ~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~--nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~ 226 (474)
.| ..+++|++..+++.. .+.. ...+..+.|++. ++++|++++.|++|++||+.+++++.++. .
T Consensus 120 --~d------~~i~iwd~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 186 (408)
T 4a11_B 120 --FD------KTLKVWDTNTLQTAD---VFNF--EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR 186 (408)
T ss_dssp --TT------SEEEEEETTTTEEEE---EEEC--SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC
T ss_pred --CC------CeEEEeeCCCCccce---eccC--CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC
Confidence 45 699999999888633 2332 234557888732 55699999999999999999999888886 4
Q ss_pred CcEEEEEEcCCc--eEEEEecCCCCccEEEEecCCCe-EEEEE---------------eecCcceeEEEEEecCCCeEEE
Q 011970 227 KHVQEIKISPGI--MLLIFNRSSSHVPLKILSIEDGT-VLKVF---------------YHLLHRNKKVDFIEQFNEKLLV 288 (474)
Q Consensus 227 ~~V~~vafSpg~--~la~~s~~s~D~tIkLWdi~tG~-~L~tl---------------~~h~~~v~~V~F~~~~~~~ll~ 288 (474)
..|.+++|+|++ +++++ +.|++|++||+++++ ++..+ ..|...+..++|+ |++..|++
T Consensus 187 ~~v~~~~~~~~~~~ll~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~ 262 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATA---SADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLT 262 (408)
T ss_dssp SCEEEEEECSSCTTEEEEE---ETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC-TTSSEEEE
T ss_pred CcEEEEEECCCCCcEEEEE---cCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc-CCCCEEEE
Confidence 689999999854 35555 457999999999886 66666 5678899999998 57888999
Q ss_pred EeCCCcEEEEECCCCceEEeccccC------CceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEEEeccCCCCcCCCCe
Q 011970 289 KQENENLQILDVRNAELMEVSRTEF------MTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNT 361 (474)
Q Consensus 289 ~~~D~tIkIWDv~tg~~~~~l~~h~------~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~tl~gH~~~~~~~~v 361 (474)
++.|++|++||+.+++......++. .....+...+.+.+++++.|++|++||+. |+++.++.+|... |
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-----v 337 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT-----V 337 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC-----E
T ss_pred ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe-----E
Confidence 9999999999999998765543321 12223333455555555559999999995 9999999999886 7
Q ss_pred eEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCC
Q 011970 362 NNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 411 (474)
Q Consensus 362 ~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~ 411 (474)
.+++|+|||++|++++. ||+|+|||+.+++.+.....+.
T Consensus 338 ~~~~~s~~~~~l~s~~~-----------dg~i~iw~~~~~~~~~~~~~~~ 376 (408)
T 4a11_B 338 DCCVFQSNFQELYSGSR-----------DCNILAWVPSLYEPVPDDDETT 376 (408)
T ss_dssp EEEEEETTTTEEEEEET-----------TSCEEEEEECC-----------
T ss_pred EEEEEcCCCCEEEEECC-----------CCeEEEEeCCCCCccCCCCceE
Confidence 89999999999999987 9999999999999887765554
No 78
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-41 Score=361.88 Aligned_cols=265 Identities=12% Similarity=0.061 Sum_probs=208.7
Q ss_pred ccceeeEeecCCCceEEEEEEeeCC---------CEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccC
Q 011970 117 TNRRICFLNVSPDEVIRSLFYNKNN---------DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKW 187 (474)
Q Consensus 117 tg~~l~~l~g~~~~~i~sv~fspdg---------~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~ 187 (474)
++++..+++ +.+.|++|+|+|++ ++||+++.. + +.
T Consensus 123 ~~r~~~~~~--~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~---~----------------~~--------------- 166 (524)
T 2j04_B 123 GKRRGFIYN--VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQ---Y----------------MD--------------- 166 (524)
T ss_dssp CCSCEEEEE--CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-------------------------------------
T ss_pred CCcceEEEE--CCCceeEEEecccCCCCccCcCCeEEEEEEec---c----------------cC---------------
Confidence 466777776 45889999999998 788886521 1 00
Q ss_pred ceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEE----EEEc--CCcEEEEEEcCC-------ceEEEEecCCCCccEEE
Q 011970 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML----YSIS--DKHVQEIKISPG-------IMLLIFNRSSSHVPLKI 254 (474)
Q Consensus 188 ~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l----~tl~--~~~V~~vafSpg-------~~la~~s~~s~D~tIkL 254 (474)
..++ |++++|||++.|++|||||+.++++. .++. ...|+.|+|+|+ ++||++ +.|++|+|
T Consensus 167 ---~~~~-~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~---s~Dgtvrl 239 (524)
T 2j04_B 167 ---EPLN-EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFV---SQEGTINF 239 (524)
T ss_dssp -------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEE---ETTSCEEE
T ss_pred ---Cccc-hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEE---ecCCeEEE
Confidence 0124 79999999999999999999888742 3443 467999999984 577766 45899999
Q ss_pred EecCCCeE-----------EEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCc-eEEeccccCCceEEE--E
Q 011970 255 LSIEDGTV-----------LKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAE-LMEVSRTEFMTPSAF--I 320 (474)
Q Consensus 255 Wdi~tG~~-----------L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~-~~~~l~~h~~~v~sv--~ 320 (474)
||+.++++ ..++.+|...+.+|+|++ ++.|++++.|++|+|||+++++ +..++.+|...|.++ +
T Consensus 240 Wd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~--~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~ 317 (524)
T 2j04_B 240 LEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS--PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTA 317 (524)
T ss_dssp EECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS--SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEE
T ss_pred EEcCCCccccccceeecCceEEEEcCCCCEEEEEecC--CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEE
Confidence 99988753 247889999999999985 4688889999999999999875 456788999999999 6
Q ss_pred EcCCC-cEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEe
Q 011970 321 FLYEN-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSS 397 (474)
Q Consensus 321 Fspdg-~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWd 397 (474)
|+|+| ++|||++ |++|||||++ ++++.++.+|... ..|++|+|+|||+.||+++. |++|||||
T Consensus 318 ~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~---~~v~~v~fsp~~~~l~s~~~-----------d~tv~lwd 383 (524)
T 2j04_B 318 YSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG---SNLVPVVYCPQIYSYIYSDG-----------ASSLRAVP 383 (524)
T ss_dssp CCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC---CSCCCEEEETTTTEEEEECS-----------SSEEEEEE
T ss_pred cCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc---CcccceEeCCCcCeEEEeCC-----------CCcEEEEE
Confidence 79998 9999999 9999999995 8998899988742 12678999999999999876 99999999
Q ss_pred CCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 398 ILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 398 i~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
+.+++|+.++.+|.+ .|++|+|||||+.||||+.||+|+|||.
T Consensus 384 ~~~~~~~~~l~gH~~----------------------------------~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 384 SRAAFAVHPLVSRET----------------------------------TITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp TTCTTCCEEEEECSS----------------------------------CEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred CcccccceeeecCCC----------------------------------ceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 999999999999996 8999999999999999999999999983
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-41 Score=332.36 Aligned_cols=309 Identities=12% Similarity=0.057 Sum_probs=218.0
Q ss_pred CCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccC--CCCCccceeeeccccCceEEEEeCCCCeEEEEec
Q 011970 128 PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG--KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA 205 (474)
Q Consensus 128 ~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G--~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s 205 (474)
+.+.|.+++|+|||+.||+++ .| .+++||++..+ ++... +. +|...+..++|+ |+|++|++++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~----~d------~~i~iw~~~~~~~~~~~~---~~-~h~~~v~~~~~s-~~~~~l~s~s 74 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTT----AT------NQVELYEQDGNGWKHART---FS-DHDKIVTCVDWA-PKSNRIVTCS 74 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCC----SS------SCBCEEEEETTEEEECCC---BC-CCSSCEEEEEEC-TTTCCEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEec----CC------CEEEEEEccCCceEEEEE---Ee-cCCceEEEEEEe-CCCCEEEEEe
Confidence 456799999999999999854 55 68899999888 44332 22 245567799998 7999999999
Q ss_pred CCCcEEEeecCCCe---EEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe---EEEEEee-cCcceeE
Q 011970 206 QDSIYKVFDLKNYT---MLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT---VLKVFYH-LLHRNKK 275 (474)
Q Consensus 206 ~D~tiKlWdl~tg~---~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~---~L~tl~~-h~~~v~~ 275 (474)
.|++|+|||+.+++ +...+. ...|.+++|+| +.+|+++ +.|++|++||+++++ +++.+.+ |...+.+
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 151 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVG---SGARVISVCYFEQENDWWVSKHLKRPLRSTILS 151 (377)
T ss_dssp TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEE---ESSSCEEECCC-----CCCCEEECSSCCSCEEE
T ss_pred CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEE---ecCCeEEEEEECCcccceeeeEeecccCCCeEE
Confidence 99999999999887 556554 56899999998 5566665 448999999999998 4888987 9999999
Q ss_pred EEEEecCCCeEEEEeCCCcEEEEECC------------------CCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcE
Q 011970 276 VDFIEQFNEKLLVKQENENLQILDVR------------------NAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTV 336 (474)
Q Consensus 276 V~F~~~~~~~ll~~~~D~tIkIWDv~------------------tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tI 336 (474)
++|+ |++..|++++.|++|+|||+. +++++..+ +|...|.+++|+|+|++|++++ |++|
T Consensus 152 ~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i 229 (377)
T 3dwl_C 152 LDWH-PNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSV 229 (377)
T ss_dssp EEEC-TTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEE
T ss_pred EEEc-CCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcE
Confidence 9998 577888889999999999995 46778888 9999999999999999999999 9999
Q ss_pred EEEeCC-CcE----EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCC-C-eEEEEecC
Q 011970 337 AVWNFR-GEL----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT-G-KCLAKINA 409 (474)
Q Consensus 337 klWd~~-G~l----l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~t-G-~cl~tl~g 409 (474)
+|||+. +++ +.++.+|... |.+++|+|||++|++++. |+.+ +|+... | ++...+..
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~~-----------~~~~-~~~~~~~~~~~~~~~~~ 292 (377)
T 3dwl_C 230 TIAYPSAPEQPPRALITVKLSQLP-----LRSLLWANESAIVAAGYN-----------YSPI-LLQGNESGWAHTRDLDA 292 (377)
T ss_dssp C-CEECSTTSCEEECCCEECSSSC-----EEEEEEEETTEEEEEESS-----------SSEE-EECCCC---CCSBCCCS
T ss_pred EEEECCCCCCcceeeEeecCCCCc-----eEEEEEcCCCCEEEEEcC-----------CcEE-EEEeCCCceEEEeeecc
Confidence 999995 887 8899999987 789999999999999864 5655 666543 3 23333332
Q ss_pred CCCCCCCccccCCCC--CCccccc------cccc---------cccccccccccCEEEEEEcCCC-C---EEEEEcCCCc
Q 011970 410 TNCSPKVDDELGSSS--TGKSKKL------NKSS---------YIRSTVGEALEDITSLFYDEER-N---EIYTGNRHGL 468 (474)
Q Consensus 410 H~~~~~~~~~~~~~~--~~~~~~~------~~~~---------~~~~~~~~~l~~V~slafSpDg-~---~LaSgs~Dgt 468 (474)
...... ..+...+. .+..... .... .......-+...|++|.+.++. . .|+||+.||+
T Consensus 293 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~ 371 (377)
T 3dwl_C 293 GTSKTS-FTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGR 371 (377)
T ss_dssp CCCCCC-BSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSE
T ss_pred cccccc-cccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCc
Confidence 221000 00000000 0000000 0000 0000011255689999965544 4 6999999999
Q ss_pred EEEccC
Q 011970 469 VHVWSN 474 (474)
Q Consensus 469 VklWd~ 474 (474)
|+|||.
T Consensus 372 i~iWdl 377 (377)
T 3dwl_C 372 VVLWTL 377 (377)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 999985
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.5e-39 Score=326.29 Aligned_cols=293 Identities=11% Similarity=0.143 Sum_probs=231.0
Q ss_pred cccccccccEEEEEee-ccEEEEeeCCCeEEeeeccccceeeEeec-CCCceEEEEEEeeCCCEEEEEEeecCCCcccee
Q 011970 82 LPFLMKRTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNV-SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLK 159 (474)
Q Consensus 82 ~~~~~~~~~V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g-~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk 159 (474)
.|.|+...-+.-|.++ +++||+|. |++|+|||..||+++..+.. .|.+.|.+|+|+|||+.||+++ .|
T Consensus 99 ap~~~~d~y~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs----~D----- 168 (420)
T 4gga_A 99 APEIRNDYYLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT----SS----- 168 (420)
T ss_dssp CTTCCCCTTCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE----TT-----
T ss_pred CCCCcccccceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE----CC-----
Confidence 3444444444456777 67777665 99999999999999887764 3667899999999999999976 55
Q ss_pred eeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe-EEEEEc--CCcEEEEEEcC
Q 011970 160 CRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKHVQEIKISP 236 (474)
Q Consensus 160 ~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~-~l~tl~--~~~V~~vafSp 236 (474)
.+++||++.+|++... +. +|...+.++++ |+++|++|+.|+++++||..+.. .+.++. ...|..+.++|
T Consensus 169 -g~v~iWd~~~~~~~~~---~~-~h~~~v~~~s~---~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~ 240 (420)
T 4gga_A 169 -AEVQLWDVQQQKRLRN---MT-SHSARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 240 (420)
T ss_dssp -SCEEEEETTTTEEEEE---EC-CCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred -CeEEEEEcCCCcEEEE---Ee-CCCCceEEEee---CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC
Confidence 6999999999987432 21 24445555555 57899999999999999988654 556664 46899999998
Q ss_pred -CceEEEEecCCCCccEEEEecCCCe----EEEEEeecCcceeEEEEEecCCCeEEEE--eCCCcEEEEECCCCceEEec
Q 011970 237 -GIMLLIFNRSSSHVPLKILSIEDGT----VLKVFYHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNAELMEVS 309 (474)
Q Consensus 237 -g~~la~~s~~s~D~tIkLWdi~tG~----~L~tl~~h~~~v~~V~F~~~~~~~ll~~--~~D~tIkIWDv~tg~~~~~l 309 (474)
+..++++ +.|+.|+||++.+|+ .+..+..|...|..++|++.....++++ +.|++|+|||+.+++++..+
T Consensus 241 ~g~~l~s~---~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 241 DGRHLASG---GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp TSSEEEEE---ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE
T ss_pred CCCeeeee---eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee
Confidence 5555554 458999999999886 3577788889999999985544555543 48999999999999999988
Q ss_pred cccCCceEEEEEcCCCcEEEEE--c-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCcccc
Q 011970 310 RTEFMTPSAFIFLYENQLFLTF--R-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQW 385 (474)
Q Consensus 310 ~~h~~~v~sv~Fspdg~llaS~--s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~ 385 (474)
..|. .+.+++|+|+++.++++ + |++|+|||+. ++++.+|+||... |++++|||||++|||||.
T Consensus 318 ~~~~-~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~-----V~~l~~spdg~~l~S~s~------- 384 (420)
T 4gga_A 318 DAHS-QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-----VLSLTMSPDGATVASAAA------- 384 (420)
T ss_dssp ECSS-CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-----EEEEEECTTSSCEEEEET-------
T ss_pred cccc-ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC-----EEEEEEcCCCCEEEEEec-------
Confidence 7765 68889999999988875 3 8999999995 9999999999987 799999999999999987
Q ss_pred ccCCCCeEEEEeCCCCeEEEEecCCCC
Q 011970 386 MEGSAGSINVSSILTGKCLAKINATNC 412 (474)
Q Consensus 386 ~~s~DgtIklWdi~tG~cl~tl~gH~~ 412 (474)
|++|||||+.+..+.++.+.|..
T Consensus 385 ----D~tvriWdv~~~~~~~~~~~~~~ 407 (420)
T 4gga_A 385 ----DETLRLWRCFELDPARRREREKA 407 (420)
T ss_dssp ----TTEEEEECCSCSSCC--------
T ss_pred ----CCeEEEEECCCCCccchhhhccC
Confidence 99999999988888777766653
No 81
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=316.61 Aligned_cols=283 Identities=11% Similarity=0.090 Sum_probs=226.9
Q ss_pred ccccEEEEEee--c-cEEEEeeC---CCeEEeeeccccceeeEeecCCCceEEEEEEeeC---CCEEEEEEeecCCCccc
Q 011970 87 KRTKVIEIVAA--R-DIVFALAH---SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKN---NDSLITVSVYASDNFSS 157 (474)
Q Consensus 87 ~~~~V~~i~~s--~-~~las~s~---dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspd---g~~Lis~S~~~s~d~s~ 157 (474)
|...|.+|.|+ + .++++++. ||++++|++.+++........|...|.+++|+|+ |+.|++++ .|
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~----~d--- 89 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD----FG--- 89 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE----TT---
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec----CC---
Confidence 66677777777 5 56677776 9999999999999877665557889999999999 69999866 45
Q ss_pred eeeeEEEEeEeccCC-CCCccceeeeccccCceEEE------EeCCCCeEEEEecCCCcEEEeecCCCe-EEEEEcC---
Q 011970 158 LKCRSTKIEYIRRGK-PDSGFALFESESLKWPGFVE------FDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSISD--- 226 (474)
Q Consensus 158 Lk~~~~~iw~i~~G~-~~~~~~lf~~~~~~~~~~V~------Fs~~nGk~LaS~s~D~tiKlWdl~tg~-~l~tl~~--- 226 (474)
..+++|++..++ +... +. .+...+..++ |+ |+|++|++++.|++|+|||+.+++ ++.++..
T Consensus 90 ---g~i~iwd~~~~~~~~~~---~~-~~~~~v~~~~~~~~~~~s-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 90 ---GNLHIWNLEAPEMPVYS---VK-GHKEIINAIDGIGGLGIG-EGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG 161 (357)
T ss_dssp ---SCEEEECTTSCSSCSEE---EC-CCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT
T ss_pred ---CeEEEEeCCCCCccEEE---EE-ecccceEEEeeccccccC-CCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC
Confidence 689999999887 4332 22 2344566774 55 799999999999999999999987 6777641
Q ss_pred ---CcEEEEE----EcC-CceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEec--CCCeEEEEeCCCcEE
Q 011970 227 ---KHVQEIK----ISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ--FNEKLLVKQENENLQ 296 (474)
Q Consensus 227 ---~~V~~va----fSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~--~~~~ll~~~~D~tIk 296 (474)
..|++++ |+| +..++++ +.|+.|++||+++++++.. ..|...+..++|++. ++..+++++.|++|+
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 162 ENKRDCWTVAFGNAYNQEERVVCAG---YDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp SCCCCEEEEEEECCCC-CCCEEEEE---ETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEE
T ss_pred CCCCceEEEEEEeccCCCCCEEEEE---ccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEE
Confidence 2799998 676 5555554 4478999999999998655 456789999999842 688999999999999
Q ss_pred EEECCCCceEEecc-----ccCCceEEEEEcCCCc-EEEEEc-CCcEEEEeCC-C-------------------cEEEEe
Q 011970 297 ILDVRNAELMEVSR-----TEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-G-------------------ELVTSF 349 (474)
Q Consensus 297 IWDv~tg~~~~~l~-----~h~~~v~sv~Fspdg~-llaS~s-D~tIklWd~~-G-------------------~ll~tl 349 (474)
|||+++++++..+. +|...|.+++|+|+++ +|++++ |++|+|||++ + +++.++
T Consensus 238 i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 317 (357)
T 3i2n_A 238 VFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV 317 (357)
T ss_dssp EEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred EEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc
Confidence 99999988765444 8999999999999999 899998 9999999984 3 478899
Q ss_pred ccCCCCcCCCCeeEEEECCCCCEEE-EEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 350 EDHLLWHPDCNTNNIYITSDQDLII-SYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 350 ~gH~~~~~~~~v~svafSpDg~~La-S~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
.+|... |.+++|+|||++|+ |++. |++|+|||+.+.+++
T Consensus 318 ~~~~~~-----v~~~~~s~~~~~l~~s~~~-----------d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 318 TLSTQP-----ISSLDWSPDKRGLCVCSSF-----------DQTVRVLIVTKLNKI 357 (357)
T ss_dssp ECCSSC-----EEEEEECSSSTTEEEEEET-----------TSEEEEEEECC----
T ss_pred ccCCCC-----eeEEEEcCCCCeEEEEecC-----------CCcEEEEECCCcccC
Confidence 999887 79999999999998 7876 999999999876653
No 82
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.3e-39 Score=322.00 Aligned_cols=301 Identities=10% Similarity=0.083 Sum_probs=215.9
Q ss_pred eeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEE
Q 011970 112 AFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFV 191 (474)
Q Consensus 112 lW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V 191 (474)
||++.+.+.+.++++ |.+.|++|+|||||+.|++++ ++ .++||++..++. .+... ...+..+
T Consensus 3 i~s~~~~~~~~~~~~-h~~~V~~v~fs~dg~~la~g~----~~-------~~~iw~~~~~~~-----~~~~~-~~~~~~~ 64 (355)
T 3vu4_A 3 LGSMITRNPIVPENH-VSNPVTDYEFNQDQSCLILST----LK-------SFEIYNVHPVAH-----IMSQE-MRHLSKV 64 (355)
T ss_dssp -----------------CCCCCEEEECTTSSEEEEEC----SS-------EEEEEEETTEEE-----EEEEE-CSCCCEE
T ss_pred cccccccCCcccccc-CCCceEEEEECCCCCEEEEEc----CC-------EEEEEecCCcce-----eeeee-cCCeEEE
Confidence 577888888888886 778999999999999998853 55 468999877664 22221 2235578
Q ss_pred EEeCCCCeEE-EEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCC-eEEEEEee
Q 011970 192 EFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDG-TVLKVFYH 268 (474)
Q Consensus 192 ~Fs~~nGk~L-aS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG-~~L~tl~~ 268 (474)
+|. +++..+ ++++.|++|+|||+.+++++.++. ...|.+++|+|+..+++. |++|+|||+.++ ++++++..
T Consensus 65 ~~~-~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-----~~~i~i~d~~~~~~~~~~~~~ 138 (355)
T 3vu4_A 65 RML-HRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSY-----GDVISVFKFGNPWKRITDDIR 138 (355)
T ss_dssp EEC-TTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEE-----TTEEEEEESSTTCCBSSCCEE
T ss_pred EEc-CCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEE-----cCEEEEEECCCCceeeEEecc
Confidence 897 566666 568889999999999999998886 468999999987765543 578999999999 88887775
Q ss_pred cCcceeEEEEEecCCCeEEEE--eCCCcEEEEECCCCc----------------eEEeccccCCceEEEEEcCCCcEEEE
Q 011970 269 LLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNAE----------------LMEVSRTEFMTPSAFIFLYENQLFLT 330 (474)
Q Consensus 269 h~~~v~~V~F~~~~~~~ll~~--~~D~tIkIWDv~tg~----------------~~~~l~~h~~~v~sv~Fspdg~llaS 330 (474)
....++|++ ..++++ +.|++|+|||+.+++ ++.++.+|...|.+++|+|||++|||
T Consensus 139 ---~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 139 ---FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp ---EEEEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ---CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence 344455553 667764 689999999999876 37888999999999999999999999
Q ss_pred Ec-CCc-EEEEeCC-CcEEEEec-c-CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE--
Q 011970 331 FR-NRT-VAVWNFR-GELVTSFE-D-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC-- 403 (474)
Q Consensus 331 ~s-D~t-IklWd~~-G~ll~tl~-g-H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c-- 403 (474)
++ |++ |+|||++ |+++.+|. + |... |++++|+|||++||+++. |++|+|||+.++..
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~-----v~~~~~s~~~~~l~s~s~-----------d~~v~iw~~~~~~~~~ 276 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFRRGLDRAD-----VVDMKWSTDGSKLAVVSD-----------KWTLHVFEIFNDQDNK 276 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEECTTCCSC-----EEEEEECTTSCEEEEEET-----------TCEEEEEESSCCSCCC
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCCCCCc-----EEEEEECCCCCEEEEEEC-----------CCEEEEEEccCCCCcc
Confidence 99 999 9999995 99999999 6 8876 799999999999999987 99999999976532
Q ss_pred EEEecCCCCCCCCccccCCCCCCccccccccccccc-ccc-ccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 404 LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRS-TVG-EALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 404 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
...+.++-. |. .....|.+.. ..+ ........++|+|||+.|++|+.||++++|+
T Consensus 277 ~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 277 RHALKGWIN-MK--------------YFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp SEETTTTEE-CC--------------CCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEE
T ss_pred cccccceee-cc--------------ccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 222222100 00 0000111100 001 1112346699999999999999999999997
No 83
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=310.56 Aligned_cols=299 Identities=14% Similarity=0.081 Sum_probs=236.0
Q ss_pred CeEEeeeccccceeeEeecCCCceEEEEEEeeC---CCEEEEEEeecCCCccceeeeEEEEeEecc-CCCCCccceeeec
Q 011970 108 GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKN---NDSLITVSVYASDNFSSLKCRSTKIEYIRR-GKPDSGFALFESE 183 (474)
Q Consensus 108 gtiklW~~~tg~~l~~l~g~~~~~i~sv~fspd---g~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~-G~~~~~~~lf~~~ 183 (474)
+.+..|+....+.+..+.+ |.+.|.+|+|+|+ |+.|++++ .| ..++||++.+ ++... ..+. .
T Consensus 19 ~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~g~~l~~~~----~d------g~i~iw~~~~~~~~~~--~~~~-~ 84 (368)
T 3mmy_A 19 GSATTDNHNPMKDIEVTSS-PDDSIGCLSFSPPTLPGNFLIAGS----WA------NDVRCWEVQDSGQTIP--KAQQ-M 84 (368)
T ss_dssp ----CCSSCTTCCEECSSC-CSSCEEEEEECCTTSSSEEEEEEE----TT------SEEEEEEECTTSCEEE--EEEE-E
T ss_pred EEeccCCCCCcceeEeccC-CCCceEEEEEcCCCCCceEEEEEC----CC------CcEEEEEcCCCCceeE--EEec-c
Confidence 3455566677788888886 8899999999999 69999976 45 6899999987 54321 1122 2
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEE--cCCc-eEEEEecCCCCccEEEEecCC
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKI--SPGI-MLLIFNRSSSHVPLKILSIED 259 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vaf--Spg~-~la~~s~~s~D~tIkLWdi~t 259 (474)
|...+..++|+ |||++|++++.|++|+|||+.+++++.... ...|.+++| +|++ .++++ +.|++|++||+++
T Consensus 85 h~~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~---~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 85 HTGPVLDVCWS-DDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTG---SWDKTLKFWDTRS 160 (368)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEE---ETTSEEEEECSSC
T ss_pred ccCCEEEEEEC-cCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEc---cCCCcEEEEECCC
Confidence 45667799998 799999999999999999999999877553 678999999 7755 45554 4589999999999
Q ss_pred CeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEE--eccccCCceEEEEEcCCCcE----EEEEc-
Q 011970 260 GTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME--VSRTEFMTPSAFIFLYENQL----FLTFR- 332 (474)
Q Consensus 260 G~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~--~l~~h~~~v~sv~Fspdg~l----laS~s- 332 (474)
++++.++..| ..+..+.+. +..++++..|+++++||+++..... ....+...+..+.+.++++. +++++
T Consensus 161 ~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 161 SNPMMVLQLP-ERCYCADVI---YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp SSCSEEEECS-SCEEEEEEE---TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET
T ss_pred CcEEEEEecC-CCceEEEec---CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC
Confidence 9999999976 456777765 4688889999999999999865432 22334445566666655544 88888
Q ss_pred CCcEEEEeCC-C---cEEEEeccCCCCcC-------CCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCC
Q 011970 333 NRTVAVWNFR-G---ELVTSFEDHLLWHP-------DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG 401 (474)
Q Consensus 333 D~tIklWd~~-G---~ll~tl~gH~~~~~-------~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG 401 (474)
|++|++||++ + +++.++.+|..... ...|.+++|+|||++||+++. ||+|+|||+.+|
T Consensus 237 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-----------dg~i~iwd~~~~ 305 (368)
T 3mmy_A 237 EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGS-----------DGRFSFWDKDAR 305 (368)
T ss_dssp TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEET-----------TSCEEEEETTTT
T ss_pred CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEcc-----------CCeEEEEECCCC
Confidence 9999999996 5 67889999875100 001789999999999999987 999999999999
Q ss_pred eEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 402 KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 402 ~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
+++.++.+|.. .|++++|+|||+.||+|+.|+..+.|+
T Consensus 306 ~~~~~~~~~~~----------------------------------~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 306 TKLKTSEQLDQ----------------------------------PISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp EEEEECCCCSS----------------------------------CEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred cEEEEecCCCC----------------------------------CceEEEECCCCCeEEEEeccccccccc
Confidence 99999999985 899999999999999999998766654
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4e-38 Score=302.28 Aligned_cols=275 Identities=16% Similarity=0.151 Sum_probs=226.4
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeecccccee---eEeec-CCCceEEEEEEeeCCCEEEEEEeecCCCccceee
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRI---CFLNV-SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKC 160 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l---~~l~g-~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~ 160 (474)
|...|..+.|+ +++|++++ ||++++|++.+++.. ..+.. .|...|.+++|+|+|+.|++++ .|
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d------ 118 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG----EA------ 118 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE----SS------
T ss_pred CCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc----CC------
Confidence 44555555555 88999999 999999999988744 34431 3778999999999999999866 44
Q ss_pred eEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCC-
Q 011970 161 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPG- 237 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg- 237 (474)
..+++|++..++...... +. .+...+..++|+ |+|++|++++.|++|++||+.+++++.++. ...|.+++|+|+
T Consensus 119 ~~i~~~d~~~~~~~~~~~-~~-~~~~~i~~~~~~-~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAE-LT-SSAPACYALAIS-PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp SEEEEEECCCC--EEEEE-EE-CSSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred CcEEEEECCCCCcceeee-cc-cCCCceEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCC
Confidence 689999998887421111 21 234556789998 799999999999999999999999998886 468999999984
Q ss_pred ceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceE
Q 011970 238 IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPS 317 (474)
Q Consensus 238 ~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~ 317 (474)
..|+++ +.|++|++||+++++++..+. |...+..++|+ |++..+++++.|++|++||+.+++... +.+|...|.
T Consensus 196 ~~l~~~---~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s-~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~~~~~~v~ 269 (337)
T 1gxr_A 196 TKLWTG---GLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC-PTGEWLAVGMESSNVEVLHVNKPDKYQ-LHLHESCVL 269 (337)
T ss_dssp SEEEEE---ETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSSCEEE-ECCCSSCEE
T ss_pred CEEEEE---ecCCcEEEEECCCCceEeeec-CCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCCeEE-EcCCcccee
Confidence 466655 457899999999999999886 55789999997 678888889999999999999998764 577899999
Q ss_pred EEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEE
Q 011970 318 AFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINV 395 (474)
Q Consensus 318 sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIkl 395 (474)
+++|+|++++|++++ |++|++||++ ++++..+ .|... +.+++|+|||++|++++. ||+|++
T Consensus 270 ~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~-----v~~~~~s~~~~~l~~~~~-----------dg~i~i 332 (337)
T 1gxr_A 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSS-----VLSCDISVDDKYIVTGSG-----------DKKATV 332 (337)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSC-----EEEEEECTTSCEEEEEET-----------TSCEEE
T ss_pred EEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCc-----EEEEEECCCCCEEEEecC-----------CCeEEE
Confidence 999999999999999 9999999995 8887655 45554 789999999999999986 999999
Q ss_pred EeC
Q 011970 396 SSI 398 (474)
Q Consensus 396 Wdi 398 (474)
||+
T Consensus 333 w~~ 335 (337)
T 1gxr_A 333 YEV 335 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 85
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-40 Score=358.39 Aligned_cols=305 Identities=10% Similarity=0.023 Sum_probs=227.2
Q ss_pred ccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEe
Q 011970 89 TKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (474)
Q Consensus 89 ~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw 166 (474)
..|.+|.++ |+++|++|.|+||+ |.++++++ +| |...|++|+|+|||. + ++ |
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~g-h~~~v~~V~FsPdg~----------~-------~~---~ 69 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NC-NSKNLFHVKEFPLEF----------E-------NK---L 69 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SS-BGGGTEEEEEECCCC----------C-------CT---T
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--ccccccee---cC-CCccEEEEEECCCCC----------c-------ce---E
Confidence 457777777 99999999999999 75556544 66 778899999999991 2 23 4
Q ss_pred EeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCC------cEEEEEEcC-Cce
Q 011970 167 YIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK------HVQEIKISP-GIM 239 (474)
Q Consensus 167 ~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~------~V~~vafSp-g~~ 239 (474)
++.+++... +++..+..+|..|+|| |||++||+++.|++|+|||.++ ++.++..+ .|.+|+||| |.+
T Consensus 70 ~~~~~~~~~---~~~~~~~~~V~~vawS-PdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~ 143 (588)
T 2j04_A 70 DFELAQQNG---LLNSQPVCYPRVCKPS-PIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESS 143 (588)
T ss_dssp TTSCCCSSC---SSTTSCSCCEEEEEEC-SSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSC
T ss_pred EEEeCCCce---EeecCCCCcEEEEEEC-CCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCE
Confidence 444444322 2221224577899998 7999999999999999999655 66666522 399999998 666
Q ss_pred EEEEecCCCCccEEEEecCCCe-------EEEEE----eecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceE--
Q 011970 240 LLIFNRSSSHVPLKILSIEDGT-------VLKVF----YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM-- 306 (474)
Q Consensus 240 la~~s~~s~D~tIkLWdi~tG~-------~L~tl----~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~-- 306 (474)
||++ +.|++|+|||+++|+ .++++ .+|..+|.+|+|+ |++ +++++.|++|++||+.++++.
T Consensus 144 LAsg---s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS-Pdg--Laass~D~tVrlWd~~~~~~~~~ 217 (588)
T 2j04_A 144 IVVG---NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY-EDV--LVAALSNNSVFSMTVSASSHQPV 217 (588)
T ss_dssp EEEE---ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE-TTE--EEEEETTCCEEEECCCSSSSCCC
T ss_pred EEEE---cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc-CCc--EEEEeCCCeEEEEECCCCccccc
Confidence 6665 558999999999986 47888 5677899999999 444 888999999999999998853
Q ss_pred -Eec-cccCCceEEEEEcCCCcEEEEEcCCcEEEEeCCCcEEEEec-cCCCCcCCCCeeEEEE--CCCCCEEEEEecCCC
Q 011970 307 -EVS-RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFE-DHLLWHPDCNTNNIYI--TSDQDLIISYCKAEP 381 (474)
Q Consensus 307 -~~l-~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~G~ll~tl~-gH~~~~~~~~v~svaf--SpDg~~LaS~s~~~~ 381 (474)
+++ .+|...|++++|+ |+.||+++|++|+|||+.+..+.++. ||... |++|+| +|||+.|++++.
T Consensus 218 ~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~-----V~~va~~~s~d~~~La~a~e--- 287 (588)
T 2j04_A 218 SRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKTGSLEN-----FHIIPLNHEKESTILLMSNK--- 287 (588)
T ss_dssp EEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEECSCCSC-----CCEEEETTCSSCEEEEECSS---
T ss_pred eeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEcCCCce-----EEEEEeeeCCCCCEEEEEcC---
Confidence 566 4888999999999 68999999999999999755553444 89987 689999 999999999876
Q ss_pred ccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccccccccccccccc---ccccCEEEEEEcCCCC
Q 011970 382 EDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVG---EALEDITSLFYDEERN 458 (474)
Q Consensus 382 ~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~V~slafSpDg~ 458 (474)
||+ |||.... ++ +..... ..|. ..+....|......- ++...|++|+|||||+
T Consensus 288 --------dG~-klw~~d~---~~-~spd~~----l~a~-------~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~ 343 (588)
T 2j04_A 288 --------TSY-KVLLEDE---LH-VTADNI----IAPY-------LEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGY 343 (588)
T ss_dssp --------CEE-EEEESSS---EE-EECCCS----SHHH-------HHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSS
T ss_pred --------CCC-EEEeecc---EE-ECCCce----EEEE-------cCCEEEEEECCCCceeeeccceEEEEEEECCCCC
Confidence 899 9999752 33 332221 0000 011222332211111 2223699999999999
Q ss_pred EEEEEcC
Q 011970 459 EIYTGNR 465 (474)
Q Consensus 459 ~LaSgs~ 465 (474)
+||+++.
T Consensus 344 ~lA~~~~ 350 (588)
T 2j04_A 344 SIAIVYD 350 (588)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999984
No 86
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4e-39 Score=313.63 Aligned_cols=245 Identities=12% Similarity=0.094 Sum_probs=199.0
Q ss_pred eeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccC--CCCCccceeeeccccCceEEEEeCC-C
Q 011970 121 ICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG--KPDSGFALFESESLKWPGFVEFDDV-N 197 (474)
Q Consensus 121 l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G--~~~~~~~lf~~~~~~~~~~V~Fs~~-n 197 (474)
+.++++ |.+.|++++|+|||+.|||+| .| ++++||++..+ ++.. . +. +|...|..|+|++| +
T Consensus 2 ~~~~~~-h~~~V~~~~~s~~g~~las~s----~D------~~v~iw~~~~~~~~~~~--~-l~-gH~~~V~~v~~s~~~~ 66 (297)
T 2pm7_B 2 VVIANA-HNEMIHDAVMDYYGKRMATCS----SD------KTIKIFEVEGETHKLID--T-LT-GHEGPVWRVDWAHPKF 66 (297)
T ss_dssp CEECCS-CSSCEEEEEECTTSSEEEEEE----TT------SCEEEEEBCSSCBCCCE--E-EC-CCSSCEEEEEECCGGG
T ss_pred ceeccC-CcCceEEEEECCCCCEEEEEe----CC------CEEEEEecCCCCcEEEE--E-Ec-cccCCeEEEEecCCCc
Confidence 345676 889999999999999999976 55 69999998644 3322 1 22 34567789999854 5
Q ss_pred CeEEEEecCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcC---CceEEEEecCCCCccEEEEecCCCeE--EEEEee
Q 011970 198 GKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGTV--LKVFYH 268 (474)
Q Consensus 198 Gk~LaS~s~D~tiKlWdl~tg~--~l~tl~--~~~V~~vafSp---g~~la~~s~~s~D~tIkLWdi~tG~~--L~tl~~ 268 (474)
|++||||+.|++|||||+++++ ++.++. ...|.+|+|+| +.+||++ +.|++|+|||++++.. ...+.+
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~---s~d~~v~~wd~~~~~~~~~~~~~~ 143 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVA---SSDGKVSVVEFKENGTTSPIIIDA 143 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEE---ETTSEEEEEEBCSSSCBCCEEEEC
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEE---ECCCcEEEEEecCCCceeeeeeec
Confidence 9999999999999999999885 555554 56899999998 4577766 4589999999988742 467888
Q ss_pred cCcceeEEEEEec------------CCCeEEEEeCCCcEEEEECCCCc----eEEeccccCCceEEEEEcCCC---cEEE
Q 011970 269 LLHRNKKVDFIEQ------------FNEKLLVKQENENLQILDVRNAE----LMEVSRTEFMTPSAFIFLYEN---QLFL 329 (474)
Q Consensus 269 h~~~v~~V~F~~~------------~~~~ll~~~~D~tIkIWDv~tg~----~~~~l~~h~~~v~sv~Fspdg---~lla 329 (474)
|...+.+++|+|. ++..|++++.|++|+|||+++++ +..++.+|...|.+++|+|++ ++||
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~la 223 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMA 223 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEE
Confidence 9999999999853 14578888999999999999877 677899999999999999995 8999
Q ss_pred EEc-CCcEEEEeCC-Cc---EEEEe--ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCC
Q 011970 330 TFR-NRTVAVWNFR-GE---LVTSF--EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 399 (474)
Q Consensus 330 S~s-D~tIklWd~~-G~---ll~tl--~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~ 399 (474)
|++ |++|+|||++ ++ ....+ .+|..+ |++++|+|||++||+++. |++|+||+..
T Consensus 224 s~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~las~~~-----------D~~v~lw~~~ 284 (297)
T 2pm7_B 224 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSLSGNVLALSGG-----------DNKVTLWKEN 284 (297)
T ss_dssp EEETTSCEEEEEESSTTSCCEEEESSSSCCSSC-----EEEEEECSSSCCEEEEET-----------TSCEEEEEEC
T ss_pred EEECCCcEEEEEeCCCCCccceeeeecccCCCc-----EEEEEECCCCCEEEEEcC-----------CCcEEEEEEC
Confidence 999 9999999985 32 23344 466655 799999999999999987 9999999975
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-39 Score=315.92 Aligned_cols=277 Identities=12% Similarity=0.034 Sum_probs=231.1
Q ss_pred CCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCc-cceeeeccccCceEEEEeCCCCe-EEEEe
Q 011970 127 SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG-FALFESESLKWPGFVEFDDVNGK-VLTYS 204 (474)
Q Consensus 127 ~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~-~~lf~~~~~~~~~~V~Fs~~nGk-~LaS~ 204 (474)
.|.+.|.+++|+|+|+.|++++ .| ..++||++..++.... ..++ .+...+.+++|+ |+|+ +|++|
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~----~d------~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~-~~~~~~l~~~ 75 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITS----WD------GSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFI-DNTDLQIYVG 75 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEE----TT------SEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEE-ESSSEEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEc----CC------CeEEEEEeCCCCccccceeee--ecCCceEEEEEC-CCCCcEEEEE
Confidence 5889999999999999999976 44 5899999988872110 1122 345667799998 7999 99999
Q ss_pred cCCCcEEEeec-CCCeEEEEE----cCCcEEEEEEcCCceEEEEecCCCCccEEEEecCC---------CeEEEEEeecC
Q 011970 205 AQDSIYKVFDL-KNYTMLYSI----SDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED---------GTVLKVFYHLL 270 (474)
Q Consensus 205 s~D~tiKlWdl-~tg~~l~tl----~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~t---------G~~L~tl~~h~ 270 (474)
+.|++|++||+ .+++. ..+ +...|.+++|+|+.+++++ +.|++|++||+++ ++++.++. |.
T Consensus 76 ~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~ 150 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAA---SWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VK 150 (342)
T ss_dssp ETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEE---ETTSEEEEECHHHHTTBCEEEEESCSSSSS-SC
T ss_pred cCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEE---cCCCeEEEEcccccccccccccCCeeeEEe-eC
Confidence 99999999999 88876 333 4468999999997777766 4589999999998 88888887 77
Q ss_pred cceeEEEEEecCCCeEEEEeCCCcEEEEECCC-Cce--EEeccccCCceEEEEEcC-CCcEEEEEc-CCcEEEEeCC-C-
Q 011970 271 HRNKKVDFIEQFNEKLLVKQENENLQILDVRN-AEL--MEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFR-G- 343 (474)
Q Consensus 271 ~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~t-g~~--~~~l~~h~~~v~sv~Fsp-dg~llaS~s-D~tIklWd~~-G- 343 (474)
..+.+++|++ +.+++++.|++|++||+++ ++. ......|...+.+++|+| ++++|++++ |++|+|||++ +
T Consensus 151 ~~v~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 151 NKIFTMDTNS---SRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp CCEEEEEECS---SEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTC
T ss_pred CceEEEEecC---CcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCC
Confidence 8999999974 3388899999999999998 653 344567888999999999 999999999 9999999995 5
Q ss_pred -----cEEEEeccCCCCcC----CCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC-CCC
Q 011970 344 -----ELVTSFEDHLLWHP----DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT-NCS 413 (474)
Q Consensus 344 -----~ll~tl~gH~~~~~----~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH-~~~ 413 (474)
+++.+|.+|..... ...|++++|+|||++|++++. ||+|+|||+.+|+++.++.+| ..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------dg~i~vwd~~~~~~~~~~~~~h~~- 295 (342)
T 1yfq_A 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS-----------DGIISCWNLQTRKKIKNFAKFNED- 295 (342)
T ss_dssp CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET-----------TSCEEEEETTTTEEEEECCCCSSS-
T ss_pred cccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC-----------CceEEEEcCccHhHhhhhhcccCC-
Confidence 88899999965100 012799999999999999986 999999999999999999998 75
Q ss_pred CCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCc-EEE
Q 011970 414 PKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGL-VHV 471 (474)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~Dgt-Vkl 471 (474)
.|++++ |||+.||+|+.||+ .+.
T Consensus 296 ---------------------------------~v~~~~--~~~~~l~s~s~Dg~~~~~ 319 (342)
T 1yfq_A 296 ---------------------------------SVVKIA--CSDNILCLATSDDTFKTN 319 (342)
T ss_dssp ---------------------------------EEEEEE--ECSSEEEEEEECTHHHHC
T ss_pred ---------------------------------CceEec--CCCCeEEEEecCCccccc
Confidence 899999 99999999999998 443
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=326.39 Aligned_cols=316 Identities=12% Similarity=0.158 Sum_probs=227.9
Q ss_pred CCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCC-----Ccc---ceeeeccc------------cC
Q 011970 128 PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD-----SGF---ALFESESL------------KW 187 (474)
Q Consensus 128 ~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~-----~~~---~lf~~~~~------------~~ 187 (474)
+.+.|.+|+|+|+|+.||+++ .| +.++||++..++.. ... ..+. +|. ..
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~----~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~ 95 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGD----KG------GRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEK 95 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEE----TT------SEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCC
T ss_pred ccCcEEEEEECCCCCEEEEEc----CC------CeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCc
Confidence 467899999999999999976 45 69999999877620 000 1122 233 55
Q ss_pred ceEEEEeCCCC--eEEEEecCCCcEEEeecCCCeEE---------------------------------------EEE--
Q 011970 188 PGFVEFDDVNG--KVLTYSAQDSIYKVFDLKNYTML---------------------------------------YSI-- 224 (474)
Q Consensus 188 ~~~V~Fs~~nG--k~LaS~s~D~tiKlWdl~tg~~l---------------------------------------~tl-- 224 (474)
|..|+|+ |++ ..|++++.|++|+|||+.++++. ..+
T Consensus 96 V~~l~~~-~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 96 INKIRWL-PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCEEEEC-CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred eEEEEEc-CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 7789998 687 78999999999999999875542 122
Q ss_pred -cCCcEEEEEEcCCceEEEEecCCCCccEEEEecC-CCeEEEE-------EeecCcceeEEEEEecCC-CeEEEEeCCCc
Q 011970 225 -SDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIE-DGTVLKV-------FYHLLHRNKKVDFIEQFN-EKLLVKQENEN 294 (474)
Q Consensus 225 -~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~-tG~~L~t-------l~~h~~~v~~V~F~~~~~-~~ll~~~~D~t 294 (474)
+...|.+++|+|++.+++++ .|++|+|||++ .+++++. +.+|...+.+++|+ |++ ..+++++.|++
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSA---DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH-PNSCNTFVYSSSKGT 250 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEE---CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC-SSCTTEEEEEETTSC
T ss_pred CCCcceEEEEEcCCCCEEEEe---CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEEC-CCCCcEEEEEeCCCe
Confidence 34679999999855444443 38999999999 5667764 45788899999998 555 78888999999
Q ss_pred EEEEECCCCce----EEeccccCC------------ceEEEEEcCCCcEEEEEcCCcEEEEeC-C-CcEEEEeccCCCCc
Q 011970 295 LQILDVRNAEL----MEVSRTEFM------------TPSAFIFLYENQLFLTFRNRTVAVWNF-R-GELVTSFEDHLLWH 356 (474)
Q Consensus 295 IkIWDv~tg~~----~~~l~~h~~------------~v~sv~Fspdg~llaS~sD~tIklWd~-~-G~ll~tl~gH~~~~ 356 (474)
|+|||++++++ +.++.+|.. .|.+++|+|+|++|+++++++|+|||+ . ++++.++.+|....
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGT
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccc
Confidence 99999999997 788888886 899999999999999998999999999 4 89999999997532
Q ss_pred C--------CC--CeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCC
Q 011970 357 P--------DC--NTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTG 426 (474)
Q Consensus 357 ~--------~~--~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~ 426 (474)
. +| .+..++|+|||++|++++. ||+|+|||+.+|+++ ++.+|.............. .
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~-----------dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~-~ 397 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSY-----------NNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRK-V 397 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECS-----------TTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCC-E
T ss_pred ccccccccccccccceEEEECCCCCEEEEecc-----------CCEEEEEEcCCCcce-eeeecccccccccccCCcc-c
Confidence 1 00 0124999999999999876 999999999999987 7778764111000000000 0
Q ss_pred ccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 427 KSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
+.........+.......-..|..++|+|+|+.||+|+.|+ +.+|+
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 398 CASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp ECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred cccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeec
Confidence 00000000000000012223789999999999999999988 56664
No 89
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.2e-38 Score=320.10 Aligned_cols=278 Identities=13% Similarity=0.154 Sum_probs=235.2
Q ss_pred ceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCC
Q 011970 119 RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNG 198 (474)
Q Consensus 119 ~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nG 198 (474)
....+|.+++..++.++.| +++.|++++ .| ++++|||+.+|++... +. +|...+..++|+ |++
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs----~d------g~i~vwd~~~~~~~~~---~~-~h~~~V~~l~~~-~~~ 174 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGA----DD------KMIRVYDSINKKFLLQ---LS-GHDGGVWALKYA-HGG 174 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEE----TT------SCEEEEETTTTEEEEE---EC-CCSSCEEEEEEC-STT
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEc----CC------CcEEEEECCCCcEEEE---Ee-CCCcCEEEEEEc-CCC
Confidence 3566888855556677666 567999976 55 6999999999986432 22 355677899998 677
Q ss_pred eEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEc--CC-ceEEEEecCCCCccEEEEecCCCe------------
Q 011970 199 KVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS--PG-IMLLIFNRSSSHVPLKILSIEDGT------------ 261 (474)
Q Consensus 199 k~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafS--pg-~~la~~s~~s~D~tIkLWdi~tG~------------ 261 (474)
+|++|+.|++|+|||+.+++++.++. ...|.+++|+ |+ ..++++ +.|++|++||+++++
T Consensus 175 -~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~---s~d~~i~vwd~~~~~~~~~~~~~~~~~ 250 (464)
T 3v7d_B 175 -ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG---SRDNTLHVWKLPKESSVPDHGEEHDYP 250 (464)
T ss_dssp -EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEE---ETTSCEEEEECCCCCCC------CCSS
T ss_pred -EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEE---cCCCcEEEeeCCCCcccccccccCCcc
Confidence 89999999999999999999999986 4689999999 44 556655 458999999999887
Q ss_pred -----------EEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEE
Q 011970 262 -----------VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLT 330 (474)
Q Consensus 262 -----------~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS 330 (474)
++.++.+|...+..+. +++..+++++.|++|++||+++++++..+.+|...|.+++|+|++++|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 327 (464)
T 3v7d_B 251 LVFHTPEENPYFVGVLRGHMASVRTVS---GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS 327 (464)
T ss_dssp EEESCGGGCTTEEEEECCCSSCEEEEE---EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEE
T ss_pred eEeeccCCCeEEEEEccCccceEEEEc---CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEE
Confidence 4667888888888775 55789999999999999999999999999999999999999999999999
Q ss_pred Ec-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEec
Q 011970 331 FR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 408 (474)
Q Consensus 331 ~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~ 408 (474)
++ |++|++||++ |+++.++.+|... |..++|+ +++|++++. ||+|++||+.++++..++.
T Consensus 328 g~~dg~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~--~~~l~s~s~-----------dg~v~vwd~~~~~~~~~~~ 389 (464)
T 3v7d_B 328 ASMDTTIRIWDLENGELMYTLQGHTAL-----VGLLRLS--DKFLVSAAA-----------DGSIRGWDANDYSRKFSYH 389 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSC-----EEEEEEC--SSEEEEEET-----------TSEEEEEETTTCCEEEEEE
T ss_pred EeCCCcEEEEECCCCcEEEEEeCCCCc-----EEEEEEc--CCEEEEEeC-----------CCcEEEEECCCCceeeeec
Confidence 99 9999999995 9999999999987 6889987 689999987 9999999999998877764
Q ss_pred CCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 409 ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 409 gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
|.. .+..++|+|+|+.|++|+ ||+|+|||.
T Consensus 390 -~~~----------------------------------~~~~~~~~~~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 390 -HTN----------------------------------LSAITTFYVSDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp -CTT----------------------------------CCCEEEEEECSSEEEEEE-TTEEEEEET
T ss_pred -CCC----------------------------------CccEEEEEeCCCEEEEec-CCeEEEEEC
Confidence 332 567799999999999999 999999984
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.9e-40 Score=338.34 Aligned_cols=282 Identities=13% Similarity=0.118 Sum_probs=217.1
Q ss_pred ccccEEEEEee---ccEEEEeeCCCeEEeeeccccceeeEeec-CCCceEEEEEEee-CCCEEEEEEeecCCCccceeee
Q 011970 87 KRTKVIEIVAA---RDIVFALAHSGVCAAFSRETNRRICFLNV-SPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCR 161 (474)
Q Consensus 87 ~~~~V~~i~~s---~~~las~s~dgtiklW~~~tg~~l~~l~g-~~~~~i~sv~fsp-dg~~Lis~S~~~s~d~s~Lk~~ 161 (474)
+...|.+|+|+ +.+||+|+.||+|+|||+.+++..+.+.. +|...|.+|+|+| |++.|+|+| .| +
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s----~D------~ 187 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS----ME------G 187 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC----SS------S
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe----CC------C
Confidence 56679999997 56999999999999999998876555432 3788999999998 688999965 55 6
Q ss_pred EEEEeEeccCCCCCccceeee-ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-C
Q 011970 162 STKIEYIRRGKPDSGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-G 237 (474)
Q Consensus 162 ~~~iw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g 237 (474)
+++|||+..+.+. .+... ....++.+++|+ |+|++|++|+.|++|+|||+. ++++.++. ...|.+|+|+| +
T Consensus 188 ~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 188 TTRLQDFKGNILR---VFASSDTINIWFCSLDVS-ASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCC 262 (435)
T ss_dssp CEEEEETTSCEEE---EEECCSSCSCCCCCEEEE-TTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTC
T ss_pred EEEEeeccCCcee---EEeccCCCCccEEEEEEC-CCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCC
Confidence 8999998765531 11221 233456689998 799999999999999999985 56666664 56899999998 4
Q ss_pred c-eEEEEecCCCCccEEEEecCCCeEEEEE---eecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccC
Q 011970 238 I-MLLIFNRSSSHVPLKILSIEDGTVLKVF---YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEF 313 (474)
Q Consensus 238 ~-~la~~s~~s~D~tIkLWdi~tG~~L~tl---~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~ 313 (474)
. +++++ +.|++|+|||+++++....+ .+|...|.+|+|+ |++.+|++++.|++|+|||+.++++...+..|.
T Consensus 263 ~~~~~s~---s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~s-pdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 263 DWFLATA---SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS-PDGARLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp SSEEEEE---ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBC-TTSSEEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred ceEEEEe---cCcceeeEEecccccccceEEEeeeccccccceeEC-CCCCeeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 4 45554 45899999999998765544 4788899999997 678899999999999999999999887766654
Q ss_pred C------ceEEEEEcCCCcEEEEEc-------------CCcEEEEeCC-CcEEEEec-cCCCCcCCCCeeEE-EECCCCC
Q 011970 314 M------TPSAFIFLYENQLFLTFR-------------NRTVAVWNFR-GELVTSFE-DHLLWHPDCNTNNI-YITSDQD 371 (474)
Q Consensus 314 ~------~v~sv~Fspdg~llaS~s-------------D~tIklWd~~-G~ll~tl~-gH~~~~~~~~v~sv-afSpDg~ 371 (474)
. .+....|+|++.++++++ +++|++||.. |+++.++. +|... |.++ +|+|||+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~-----v~s~~~fspdg~ 413 (435)
T 4e54_B 339 HRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSG-----ISSLNEFNPMGD 413 (435)
T ss_dssp CCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCC-----CCCEEEECTTSS
T ss_pred ccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCc-----EEEEEEECCCCC
Confidence 2 233445666666555542 4689999995 99998875 56665 4565 7999999
Q ss_pred EEEEEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 372 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 372 ~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
+||||+ |++|+|||+.+|+..
T Consensus 414 ~lasg~------------d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 414 TLASAM------------GYHILIWSQQEARTR 434 (435)
T ss_dssp CEEEEC------------SSEEEECCCC-----
T ss_pred EEEEEc------------CCcEEEEECCcCeee
Confidence 999875 789999999999864
No 91
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-39 Score=326.61 Aligned_cols=280 Identities=11% Similarity=0.086 Sum_probs=221.1
Q ss_pred ccccEEEEEee---ccEEEEeeCCCeEEeeeccc---cceee-EeecCCCceEEEEEEeeCCCEEEEEEeecCCCcccee
Q 011970 87 KRTKVIEIVAA---RDIVFALAHSGVCAAFSRET---NRRIC-FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLK 159 (474)
Q Consensus 87 ~~~~V~~i~~s---~~~las~s~dgtiklW~~~t---g~~l~-~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk 159 (474)
|...|.+|.|+ +++||+++.||+|++||+.+ +++.. .+...|...|.+|+|+|+++.|++++ .|
T Consensus 62 h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s----~d----- 132 (437)
T 3gre_A 62 EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS----KD----- 132 (437)
T ss_dssp TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE----TT-----
T ss_pred CCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe----CC-----
Confidence 45666666665 67999999999999999987 55332 33324788999999999999999976 55
Q ss_pred eeEEEEeEec---cCCCCCccceee---e---c--cccCceEEE--EeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC
Q 011970 160 CRSTKIEYIR---RGKPDSGFALFE---S---E--SLKWPGFVE--FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD 226 (474)
Q Consensus 160 ~~~~~iw~i~---~G~~~~~~~lf~---~---~--~~~~~~~V~--Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~ 226 (474)
++++||++. .|++........ . . +...+..++ |+ ++|++|++++.|++|++||+.+++++.++..
T Consensus 133 -g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 133 -GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVN-EEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp -SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEEC-SSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred -CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 699999994 776532111000 0 0 112222333 44 6899999999999999999999999998854
Q ss_pred ----CcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEEEEe-ecCcceeEEEEEe---cCCCeEEEEeCCCcEEE
Q 011970 227 ----KHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIE---QFNEKLLVKQENENLQI 297 (474)
Q Consensus 227 ----~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~-~h~~~v~~V~F~~---~~~~~ll~~~~D~tIkI 297 (474)
..|.+++|+|+ ..|+++ +.|++|+|||++++++++++. .|...+.+++|.+ +++..+++++.|++|+|
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~i 287 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILG---TTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 287 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEE---ETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEE
T ss_pred CCCCCceEEEEECCCCCEEEEE---cCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEE
Confidence 68999999984 455555 458999999999999999997 6777899997764 34456777889999999
Q ss_pred EECCCCceEEeccc--------------------------cCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEe
Q 011970 298 LDVRNAELMEVSRT--------------------------EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF 349 (474)
Q Consensus 298 WDv~tg~~~~~l~~--------------------------h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl 349 (474)
||++++++++.+.+ |...|++++|+ ++++|++++ |++|++||+. |+++.++
T Consensus 288 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 288 WNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAV 366 (437)
T ss_dssp EETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEE
T ss_pred EEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEE
Confidence 99999999887764 44567888888 779999999 9999999995 9999888
Q ss_pred cc-------------------------------------CCCCcCCCCeeEEEECCC--CCEEEEEecCCCccccccCCC
Q 011970 350 ED-------------------------------------HLLWHPDCNTNNIYITSD--QDLIISYCKAEPEDQWMEGSA 390 (474)
Q Consensus 350 ~g-------------------------------------H~~~~~~~~v~svafSpD--g~~LaS~s~~~~~~~~~~s~D 390 (474)
.+ |... |++|+|+++ +.+|+||+. |
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----I~~i~~~~~~~~~~l~s~~~-----------d 430 (437)
T 3gre_A 367 ISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDI-----INSISTCEVDETPLLVACDN-----------S 430 (437)
T ss_dssp ECC--CCCEEEEEEEETTEEEEEEECC-------------CCC-----EEEEEEEESSSSEEEEEEET-----------T
T ss_pred ecccccCceEEEEEeecceEEEEEecccccccccCcccccccc-----eeeEeeeccCCceEEEEEcC-----------C
Confidence 87 4444 799999998 889999987 9
Q ss_pred CeEEEEe
Q 011970 391 GSINVSS 397 (474)
Q Consensus 391 gtIklWd 397 (474)
|+|+||+
T Consensus 431 G~I~iw~ 437 (437)
T 3gre_A 431 GLIGIFQ 437 (437)
T ss_dssp SCEEEEC
T ss_pred ceEEEeC
Confidence 9999995
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-38 Score=318.05 Aligned_cols=273 Identities=12% Similarity=0.136 Sum_probs=230.1
Q ss_pred EEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEE
Q 011970 132 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYK 211 (474)
Q Consensus 132 i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiK 211 (474)
+.++.|++ +.|++++ .| +.++||++.+|++.. ++...+...+.+|+|+ |||++|++|+.|++|+
T Consensus 96 ~~~~~~s~--~~l~~~~----~d------~~v~lw~~~~~~~~~---~~~~~~~~~v~~v~~s-~~~~~l~~~~~dg~i~ 159 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVA----LE------RNVYVWNADSGSVSA---LAETDESTYVASVKWS-HDGSFLSVGLGNGLVD 159 (401)
T ss_dssp CBCEEECT--TSEEEEE----ET------TEEEEEETTTCCEEE---EEECCTTCCEEEEEEC-TTSSEEEEEETTSCEE
T ss_pred EEEEeecC--CCEEEEE----CC------CeEEEeeCCCCcEeE---eeecCCCCCEEEEEEC-CCCCEEEEECCCCeEE
Confidence 44455554 5577765 33 589999999998733 3333345667799998 7999999999999999
Q ss_pred EeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecC-CCeEEEEEeecCcceeEEEEEecCCCeEEE
Q 011970 212 VFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIE-DGTVLKVFYHLLHRNKKVDFIEQFNEKLLV 288 (474)
Q Consensus 212 lWdl~tg~~l~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~-tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~ 288 (474)
|||+.+++++.++. ...|.+++|++ ..++++ +.|++|++||++ .++++.++.+|...+..++|+ |++..+++
T Consensus 160 iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~s 234 (401)
T 4aez_A 160 IYDVESQTKLRTMAGHQARVGCLSWNR-HVLSSG---SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR-SDGLQLAS 234 (401)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEET-TEEEEE---ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSEEEE
T ss_pred EEECcCCeEEEEecCCCCceEEEEECC-CEEEEE---cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc-CCCCEEEE
Confidence 99999999999886 46899999965 566665 457999999999 578899999999999999998 57888889
Q ss_pred EeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCC-cEEEEEc---CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeE
Q 011970 289 KQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN-QLFLTFR---NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNN 363 (474)
Q Consensus 289 ~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg-~llaS~s---D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~s 363 (474)
++.|++|+|||+++++++..+.+|...|.+++|+|++ .++++++ |++|++||++ |+++.+++.+. . |.+
T Consensus 235 ~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~-~-----v~~ 308 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS-Q-----VTS 308 (401)
T ss_dssp EETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS-C-----EEE
T ss_pred EeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC-c-----EEE
Confidence 9999999999999999999999999999999999965 6777753 9999999995 99999997543 3 799
Q ss_pred EEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEE--ecCCCCCCCCccccCCCCCCccccccccccccccc
Q 011970 364 IYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK--INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTV 441 (474)
Q Consensus 364 vafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~t--l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (474)
++|+|||++|++++ ++.||+|+|||+.++++... +.+|..
T Consensus 309 ~~~s~~~~~l~~~~---------g~~dg~i~v~~~~~~~~~~~~~~~~h~~----------------------------- 350 (401)
T 4aez_A 309 LIWSPHSKEIMSTH---------GFPDNNLSIWSYSSSGLTKQVDIPAHDT----------------------------- 350 (401)
T ss_dssp EEECSSSSEEEEEE---------CTTTCEEEEEEEETTEEEEEEEEECCSS-----------------------------
T ss_pred EEECCCCCeEEEEe---------ecCCCcEEEEecCCccceeEEEecCCCC-----------------------------
Confidence 99999999999954 12499999999999876654 678885
Q ss_pred cccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 442 GEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 442 ~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++++|+|||+.|++|+.||+|++|+.
T Consensus 351 -----~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 351 -----RVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp -----CCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred -----CEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 8999999999999999999999999984
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.6e-38 Score=343.21 Aligned_cols=284 Identities=12% Similarity=0.087 Sum_probs=244.1
Q ss_pred eeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCe
Q 011970 120 RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGK 199 (474)
Q Consensus 120 ~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk 199 (474)
..++|.+ |.+.|.+++|||||+.||+++ .+ .+++||++.+|+.... +. .+...+..++|+ |||+
T Consensus 5 ~~~~~~~-h~~~v~~i~~sp~~~~la~~~----~~------g~v~iwd~~~~~~~~~---~~-~~~~~v~~~~~s-~~~~ 68 (814)
T 3mkq_A 5 IKKTFSN-RSDRVKGIDFHPTEPWVLTTL----YS------GRVEIWNYETQVEVRS---IQ-VTETPVRAGKFI-ARKN 68 (814)
T ss_dssp CEEEEEE-ECSCEEEEEECSSSSEEEEEE----TT------SEEEEEETTTTEEEEE---EE-CCSSCEEEEEEE-GGGT
T ss_pred cceeeec-CCCceEEEEECCCCCEEEEEe----CC------CEEEEEECCCCceEEE---Ee-cCCCcEEEEEEe-CCCC
Confidence 4567786 778999999999999999976 44 5899999999886442 22 244567799999 7999
Q ss_pred EEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCc-eEEEEecCCCCccEEEEecCCC-eEEEEEeecCcceeE
Q 011970 200 VLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDG-TVLKVFYHLLHRNKK 275 (474)
Q Consensus 200 ~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~-~la~~s~~s~D~tIkLWdi~tG-~~L~tl~~h~~~v~~ 275 (474)
+||+++.|++|+|||+.+++++.++. ...|.+++|+|++ .|+++ +.|++|++||++++ .+..++.+|.+.+..
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~---~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~ 145 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSG---SDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEE---ETTSEEEEEEGGGTSEEEEEEECCSSCEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEE---cCCCEEEEEECCCCceEEEEEcCCCCcEEE
Confidence 99999999999999999999998886 4689999999854 66655 45899999999998 888999999999999
Q ss_pred EEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccC-CceEEEEEcC--CCcEEEEEc-CCcEEEEeCC-CcEEEEec
Q 011970 276 VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEF-MTPSAFIFLY--ENQLFLTFR-NRTVAVWNFR-GELVTSFE 350 (474)
Q Consensus 276 V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~-~~v~sv~Fsp--dg~llaS~s-D~tIklWd~~-G~ll~tl~ 350 (474)
++|+|.++..+++++.|++|++||+.+++....+..|. ..+..++|+| ++++|++++ |++|++||++ ++++.++.
T Consensus 146 ~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (814)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc
Confidence 99985467788889999999999999998877665544 8899999999 999999999 9999999995 99999999
Q ss_pred cCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccc
Q 011970 351 DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKK 430 (474)
Q Consensus 351 gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~ 430 (474)
+|... |..++|+|||++|++++. ||+|++||+.+++++.++..|..
T Consensus 226 ~~~~~-----v~~~~~~~~~~~l~~~~~-----------dg~v~vwd~~~~~~~~~~~~~~~------------------ 271 (814)
T 3mkq_A 226 GHMSN-----VSFAVFHPTLPIIISGSE-----------DGTLKIWNSSTYKVEKTLNVGLE------------------ 271 (814)
T ss_dssp CCSSC-----EEEEEECSSSSEEEEEET-----------TSCEEEEETTTCSEEEEECCSSS------------------
T ss_pred CCCCC-----EEEEEEcCCCCEEEEEeC-----------CCeEEEEECCCCcEEEEeecCCC------------------
Confidence 99876 789999999999999986 99999999999999999999875
Q ss_pred ccccccccccccccccCEEEEEEcCCCC--EEEEEcCCCcEEEcc
Q 011970 431 LNKSSYIRSTVGEALEDITSLFYDEERN--EIYTGNRHGLVHVWS 473 (474)
Q Consensus 431 ~~~~~~~~~~~~~~l~~V~slafSpDg~--~LaSgs~DgtVklWd 473 (474)
.|++++|+|+|+ .+++|+ |+.+.+|+
T Consensus 272 ----------------~v~~~~~~~~~~~~~~~~~~-~~~~~~~~ 299 (814)
T 3mkq_A 272 ----------------RSWCIATHPTGRKNYIASGF-DNGFTVLS 299 (814)
T ss_dssp ----------------SEEEEEECTTCGGGEEEEEE-TTEEEEEE
T ss_pred ----------------cEEEEEEccCCCceEEEEEe-CCCEEEEE
Confidence 899999999997 466666 55566665
No 94
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.2e-38 Score=315.73 Aligned_cols=283 Identities=9% Similarity=0.099 Sum_probs=229.0
Q ss_pred EEEEEeeccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEecc
Q 011970 91 VIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 170 (474)
Q Consensus 91 V~~i~~s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~ 170 (474)
+..+.++++.+++++.||+|++|+..+|+.+..+...|...|.+++|+|+|+.|++++ .| ..++||++.+
T Consensus 96 ~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~----~d------g~i~iwd~~~ 165 (401)
T 4aez_A 96 LNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL----GN------GLVDIYDVES 165 (401)
T ss_dssp CBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE----TT------SCEEEEETTT
T ss_pred EEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC----CC------CeEEEEECcC
Confidence 3446666777899999999999999999999999887889999999999999999976 44 5899999999
Q ss_pred CCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecC-CCeEEEEEc--CCcEEEEEEcC-CceEEEEecC
Q 011970 171 GKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSIS--DKHVQEIKISP-GIMLLIFNRS 246 (474)
Q Consensus 171 G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~-tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~ 246 (474)
++.... +. .+...+..++|+ +++|++++.|++|++||+. .+.++.++. ...|.+++|+| +..|+++
T Consensus 166 ~~~~~~---~~-~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--- 235 (401)
T 4aez_A 166 QTKLRT---MA-GHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASG--- 235 (401)
T ss_dssp CCEEEE---EC-CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE---
T ss_pred CeEEEE---ec-CCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEE---
Confidence 886432 22 244566788885 5799999999999999998 455666665 56899999998 4566655
Q ss_pred CCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEE-Ee--CCCcEEEEECCCCceEEeccccCCceEEEEEcC
Q 011970 247 SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV-KQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLY 323 (474)
Q Consensus 247 s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~-~~--~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp 323 (474)
+.|++|++||+++++++.++.+|...+.+++|+ |++..+++ ++ .|++|++||+.+++++..+. |...+.+++|+|
T Consensus 236 ~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~-p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~ 313 (401)
T 4aez_A 236 GNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWC-PWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSP 313 (401)
T ss_dssp ETTSCEEEEETTCSSEEEEECCCSSCCCEEEEC-TTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECS
T ss_pred eCCCeEEEccCCCCCccEEecCCcceEEEEEEC-CCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECC
Confidence 457999999999999999999999999999998 45555555 43 79999999999999998876 456899999999
Q ss_pred CCcEEEE--Ec-CCcEEEEeCC-CcEEE--EeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEe
Q 011970 324 ENQLFLT--FR-NRTVAVWNFR-GELVT--SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSS 397 (474)
Q Consensus 324 dg~llaS--~s-D~tIklWd~~-G~ll~--tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWd 397 (474)
++++|++ ++ |++|+|||+. +++.. .+.+|... |..++|+|||++|++++. ||+|+|||
T Consensus 314 ~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~-----v~~~~~s~dg~~l~s~~~-----------dg~i~iw~ 377 (401)
T 4aez_A 314 HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR-----VLYSALSPDGRILSTAAS-----------DENLKFWR 377 (401)
T ss_dssp SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC-----CCEEEECTTSSEEEEECT-----------TSEEEEEE
T ss_pred CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC-----EEEEEECCCCCEEEEEeC-----------CCcEEEEE
Confidence 9999999 55 9999999994 66554 57799876 689999999999999876 99999999
Q ss_pred CCCCeEEEEecCCC
Q 011970 398 ILTGKCLAKINATN 411 (474)
Q Consensus 398 i~tG~cl~tl~gH~ 411 (474)
+.+|+++.++..+.
T Consensus 378 ~~~~~~~~~~~~~~ 391 (401)
T 4aez_A 378 VYDGDHVKRPIPIT 391 (401)
T ss_dssp CCC-----------
T ss_pred CCCCcccccccccc
Confidence 99999998775554
No 95
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.7e-38 Score=299.61 Aligned_cols=238 Identities=16% Similarity=0.187 Sum_probs=204.4
Q ss_pred ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCC----eEEEEEc--CCcEEEEEEcC---CceEEEEecCCCCccEE
Q 011970 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLK 253 (474)
Q Consensus 183 ~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg----~~l~tl~--~~~V~~vafSp---g~~la~~s~~s~D~tIk 253 (474)
+|...|.+++|+ |||++||+|+.|++|+|||+.++ +++.++. ...|.+++|+| +.+|+++ +.|++|+
T Consensus 9 gH~~~v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~---~~dg~v~ 84 (351)
T 3f3f_A 9 GHDDLVHDVVYD-FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASA---SYDKTVK 84 (351)
T ss_dssp CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEE---ETTSCEE
T ss_pred ccccceeEEEEc-CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEE---cCCCeEE
Confidence 356678899998 79999999999999999999977 4666664 46899999998 6677766 4489999
Q ss_pred EEecCCC---------eEEEEEeecCcceeEEEEEecC-CCeEEEEeCCCcEEEEECCCCceEEecc-------------
Q 011970 254 ILSIEDG---------TVLKVFYHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNAELMEVSR------------- 310 (474)
Q Consensus 254 LWdi~tG---------~~L~tl~~h~~~v~~V~F~~~~-~~~ll~~~~D~tIkIWDv~tg~~~~~l~------------- 310 (474)
|||++++ +++.++.+|...+..++|++.. +..+++++.|++|+|||+++++++..+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999998 7799999999999999998432 6788889999999999999988654432
Q ss_pred ccCCceEEEEEcCC---CcEEEEEc-CCcEEEEeCC-CcE--EEEeccCCCCcCCCCeeEEEECCCC----CEEEEEecC
Q 011970 311 TEFMTPSAFIFLYE---NQLFLTFR-NRTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQ----DLIISYCKA 379 (474)
Q Consensus 311 ~h~~~v~sv~Fspd---g~llaS~s-D~tIklWd~~-G~l--l~tl~gH~~~~~~~~v~svafSpDg----~~LaS~s~~ 379 (474)
+|...+.+++|+|+ +++|++++ |+.+.+|+.. ++. +.++.+|... |.+++|+|+| ++|++++.
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----i~~~~~~p~~~~~~~~l~s~~~- 238 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL-----IRSISWAPSIGRWYQLIATGCK- 238 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC-----EEEEEECCCSSCSSEEEEEEET-
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc-----eeEEEECCCCCCcceEEEEEcC-
Confidence 68889999999997 99999998 9999888875 664 8899999887 7999999999 89999987
Q ss_pred CCccccccCCCCeEEEEeCCCC----------------------------------------------eEEEEecCCCCC
Q 011970 380 EPEDQWMEGSAGSINVSSILTG----------------------------------------------KCLAKINATNCS 413 (474)
Q Consensus 380 ~~~~~~~~s~DgtIklWdi~tG----------------------------------------------~cl~tl~gH~~~ 413 (474)
||+|+|||+.++ +++.++.+|..
T Consensus 239 ----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~- 307 (351)
T 3f3f_A 239 ----------DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNG- 307 (351)
T ss_dssp ----------TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSS-
T ss_pred ----------CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccc-
Confidence 999999999876 55566666653
Q ss_pred CCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 414 PKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++|+|+|||+.||||+.||+|+||+.
T Consensus 308 ---------------------------------~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 308 ---------------------------------EVWSVSWNLTGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp ---------------------------------CEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred ---------------------------------cEEEEEEcCCCCEEEEecCCCcEEEEec
Confidence 8999999999999999999999999973
No 96
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.6e-37 Score=294.68 Aligned_cols=270 Identities=11% Similarity=0.145 Sum_probs=215.6
Q ss_pred EEee-ccEEEEeeCCCeEEeeeccccceeeEeec-CCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccC
Q 011970 94 IVAA-RDIVFALAHSGVCAAFSRETNRRICFLNV-SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG 171 (474)
Q Consensus 94 i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g-~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G 171 (474)
|.+| +.+||++ .|++|+|||.+||++++++.+ .|...|.+|+|+|+|+.||++| .| ++++||++.+|
T Consensus 31 l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs----~D------g~v~iw~~~~~ 99 (318)
T 4ggc_A 31 VDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT----SS------AEVQLWDVQQQ 99 (318)
T ss_dssp EEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE----TT------SEEEEEETTTT
T ss_pred EEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE----CC------CcEEEeecCCc
Confidence 4455 5667665 599999999999999998875 3667899999999999999976 55 69999999999
Q ss_pred CCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe-EEEEEc--CCcEEEEEEcC-CceEEEEecCC
Q 011970 172 KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKHVQEIKISP-GIMLLIFNRSS 247 (474)
Q Consensus 172 ~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~-~l~tl~--~~~V~~vafSp-g~~la~~s~~s 247 (474)
++... +. +|...+ ..++ +++++|++++.|+.+++|+..++. .+.++. ...+..++|++ +..++++ +
T Consensus 100 ~~~~~---~~-~h~~~~--~~~~-~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~---~ 169 (318)
T 4ggc_A 100 KRLRN---MT-SHSARV--GSLS-WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG---G 169 (318)
T ss_dssp EEEEE---EE-CCSSCE--EEEE-EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE---E
T ss_pred eeEEE---ec-CccceE--EEee-cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEE---e
Confidence 87432 22 233333 3444 467899999999999999998765 555554 46899999997 5566655 4
Q ss_pred CCccEEEEecCCCeE----EEEEeecCcceeEEEEEecCCCeEEE--EeCCCcEEEEECCCCceEEeccccCCceEEEEE
Q 011970 248 SHVPLKILSIEDGTV----LKVFYHLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNAELMEVSRTEFMTPSAFIF 321 (474)
Q Consensus 248 ~D~tIkLWdi~tG~~----L~tl~~h~~~v~~V~F~~~~~~~ll~--~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~F 321 (474)
.|++|+|||+++|+. +.....|.+.+..++|.+..+..+.. ++.|++|+|||.++++...... |...+..+.|
T Consensus 170 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~ 248 (318)
T 4ggc_A 170 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILW 248 (318)
T ss_dssp TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEE
T ss_pred cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeee
Confidence 589999999998864 34555677889999998544443333 3589999999999998877644 5567899999
Q ss_pred cCCCcEEEEE--c-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEe
Q 011970 322 LYENQLFLTF--R-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSS 397 (474)
Q Consensus 322 spdg~llaS~--s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWd 397 (474)
+|+++.++++ + |++|+|||++ |+++.+|++|... |++++|+|||++|||||. ||+|||||
T Consensus 249 ~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~-----V~~l~~spdg~~l~S~s~-----------D~~v~iWd 312 (318)
T 4ggc_A 249 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-----VLSLTMSPDGATVASAAA-----------DETLRLWR 312 (318)
T ss_dssp ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-----EEEEEECTTSSCEEEEET-----------TTEEEEEC
T ss_pred cccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC-----EEEEEEcCCCCEEEEEec-----------CCeEEEEE
Confidence 9999887764 4 9999999995 9999999999987 799999999999999987 99999999
Q ss_pred CCCC
Q 011970 398 ILTG 401 (474)
Q Consensus 398 i~tG 401 (474)
+.+.
T Consensus 313 ~~~~ 316 (318)
T 4ggc_A 313 CFEL 316 (318)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 8654
No 97
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-39 Score=320.43 Aligned_cols=244 Identities=10% Similarity=0.087 Sum_probs=193.3
Q ss_pred eeecccCCCCCcccccccccccccEEEEEeeccEEEEeeCCCeEEeeecccc--ceeeEeecCCCceEEEEEEeeCCCEE
Q 011970 67 EEYDTHDPKGHCPFVLPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRETN--RRICFLNVSPDEVIRSLFYNKNNDSL 144 (474)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s~~~las~s~dgtiklW~~~tg--~~l~~l~g~~~~~i~sv~fspdg~~L 144 (474)
+.+..|+.++.++.|.|+ +++||+++.||+|++|++.++ +++.++.+ |...|.+++|+|+|+.|
T Consensus 5 ~~~~~~~~~v~~~~~s~~-------------g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l 70 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQ-------------RTEFVTTTATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSNRI 70 (377)
T ss_dssp EEEEECSSCCSCCEECSS-------------SSEEECCCSSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTCCE
T ss_pred eeEecCCCcEEEEEECCC-------------CCEEEEecCCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCCEE
Confidence 445556666777666666 999999999999999999998 89999997 78899999999999999
Q ss_pred EEEEeecCCCccceeeeEEEEeEeccCC-CCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe---E
Q 011970 145 ITVSVYASDNFSSLKCRSTKIEYIRRGK-PDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---M 220 (474)
Q Consensus 145 is~S~~~s~d~s~Lk~~~~~iw~i~~G~-~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~---~ 220 (474)
++++ .| ++++||++..++ +.....+.. +...+..++|+ |||++|++++.|++|++||+.+++ +
T Consensus 71 ~s~s----~d------~~v~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 137 (377)
T 3dwl_C 71 VTCS----QD------RNAYVYEKRPDGTWKQTLVLLR--LNRAATFVRWS-PNEDKFAVGSGARVISVCYFEQENDWWV 137 (377)
T ss_dssp EEEE----TT------SSEEEC------CCCCEEECCC--CSSCEEEEECC-TTSSCCEEEESSSCEEECCC-----CCC
T ss_pred EEEe----CC------CeEEEEEcCCCCceeeeeEecc--cCCceEEEEEC-CCCCEEEEEecCCeEEEEEECCccccee
Confidence 9976 45 689999999887 211111222 34567799998 799999999999999999999887 4
Q ss_pred EEEEc---CCcEEEEEEcCC-ceEEEEecCCCCccEEEEecC------------------CCeEEEEEeecCcceeEEEE
Q 011970 221 LYSIS---DKHVQEIKISPG-IMLLIFNRSSSHVPLKILSIE------------------DGTVLKVFYHLLHRNKKVDF 278 (474)
Q Consensus 221 l~tl~---~~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~------------------tG~~L~tl~~h~~~v~~V~F 278 (474)
+..+. ...|.+++|+|+ .+|+++ +.|++|++||++ +|+++.++ +|...+.+++|
T Consensus 138 ~~~~~~~h~~~v~~~~~~~~~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 213 (377)
T 3dwl_C 138 SKHLKRPLRSTILSLDWHPNNVLLAAG---CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF 213 (377)
T ss_dssp CEEECSSCCSCEEEEEECTTSSEEEEE---ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE
T ss_pred eeEeecccCCCeEEEEEcCCCCEEEEE---eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE
Confidence 66664 457999999985 556655 458999999995 57889999 89999999999
Q ss_pred EecCCCeEEEEeCCCcEEEEECCCCce----EEeccccCCceEEEEEcCCCcEEEEEcCCcEEEEeCC
Q 011970 279 IEQFNEKLLVKQENENLQILDVRNAEL----MEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR 342 (474)
Q Consensus 279 ~~~~~~~ll~~~~D~tIkIWDv~tg~~----~~~l~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~ 342 (474)
+ |++..|++++.|++|+|||+.++++ +..+.+|...|.+++|+|||++|++++|+.+.+|+..
T Consensus 214 s-p~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 214 S-PSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp C-TTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred C-CCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 8 6788899999999999999999998 7888999999999999999999999994444577763
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-39 Score=317.93 Aligned_cols=257 Identities=13% Similarity=0.079 Sum_probs=200.9
Q ss_pred eecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCC-CCeEEE
Q 011970 124 LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV-NGKVLT 202 (474)
Q Consensus 124 l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~-nGk~La 202 (474)
+. +|.+.|++|+|+|+|+.|||+| .| ++++|||+..|+...- ..+. +|...|..|+|++| +|++||
T Consensus 9 ~~-~H~~~V~~v~~s~~g~~lasgs----~D------~~v~lwd~~~~~~~~~-~~l~-gH~~~V~~v~~~~~~~~~~l~ 75 (316)
T 3bg1_A 9 DT-SHEDMIHDAQMDYYGTRLATCS----SD------RSVKIFDVRNGGQILI-ADLR-GHEGPVWQVAWAHPMYGNILA 75 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEE----TT------TEEEEEEEETTEEEEE-EEEE-CCSSCEEEEEECCGGGSSCEE
T ss_pred cc-cccCeEEEeeEcCCCCEEEEEe----CC------CeEEEEEecCCCcEEE-EEEc-CCCccEEEEEeCCCCCCCEEE
Confidence 44 4889999999999999999976 55 6999999988753110 1122 35667889999854 599999
Q ss_pred EecCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcCC---ceEEEEecCCCCccEEEEecCCCe---EEEEEeecCcc
Q 011970 203 YSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISPG---IMLLIFNRSSSHVPLKILSIEDGT---VLKVFYHLLHR 272 (474)
Q Consensus 203 S~s~D~tiKlWdl~tg~--~l~tl~--~~~V~~vafSpg---~~la~~s~~s~D~tIkLWdi~tG~---~L~tl~~h~~~ 272 (474)
||+.|++|||||+++++ ++.++. ...|.+|+|+|+ .+|+++ +.|++|+|||++++. ++..+.+|...
T Consensus 76 s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasg---s~D~~i~lwd~~~~~~~~~~~~~~~h~~~ 152 (316)
T 3bg1_A 76 SCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACG---SSDGAISLLTYTGEGQWEVKKINNAHTIG 152 (316)
T ss_dssp EEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEE---CSSSCEEEEEECSSSCEEECCBTTSSSSC
T ss_pred EEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEE---cCCCCEEEEecCCCCCcceeeeeccccCC
Confidence 99999999999999884 666664 467999999984 466665 568999999998863 24566788889
Q ss_pred eeEEEEEecC----------------CCeEEEEeCCCcEEEEECCCC---ceEEeccccCCceEEEEEcCCC----cEEE
Q 011970 273 NKKVDFIEQF----------------NEKLLVKQENENLQILDVRNA---ELMEVSRTEFMTPSAFIFLYEN----QLFL 329 (474)
Q Consensus 273 v~~V~F~~~~----------------~~~ll~~~~D~tIkIWDv~tg---~~~~~l~~h~~~v~sv~Fspdg----~lla 329 (474)
+..++|+|.. +..|++++.|++|+|||++++ +++.++.+|...|.+++|+|++ ++||
T Consensus 153 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~la 232 (316)
T 3bg1_A 153 CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIA 232 (316)
T ss_dssp BCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEE
T ss_pred cceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEE
Confidence 9999998531 357778899999999999865 5778899999999999999987 8999
Q ss_pred EEc-CCcEEEEeCCC----c-EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCC-CC-
Q 011970 330 TFR-NRTVAVWNFRG----E-LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL-TG- 401 (474)
Q Consensus 330 S~s-D~tIklWd~~G----~-ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~-tG- 401 (474)
|++ |++|+|||++. + ....+.+|..+ |++++|+|||++||+++. |++|+||+.. .|
T Consensus 233 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~-----v~~v~~sp~g~~las~~~-----------D~~v~lw~~~~~g~ 296 (316)
T 3bg1_A 233 SCSQDGRVFIWTCDDASSNTWSPKLLHKFNDV-----VWHVSWSITANILAVSGG-----------DNKVTLWKESVDGQ 296 (316)
T ss_dssp EEETTCEEEEEECSSTTCCCCBCCEEEECSSC-----EEEEEECTTTCCEEEEES-----------SSCEEEEEECTTSC
T ss_pred EEcCCCeEEEEEccCccccchhhhhhhcCCCc-----EEEEEEcCCCCEEEEEcC-----------CCeEEEEEECCCCc
Confidence 999 99999999852 1 23456678766 799999999999999987 9999999975 34
Q ss_pred -eEEEEecCCCC
Q 011970 402 -KCLAKINATNC 412 (474)
Q Consensus 402 -~cl~tl~gH~~ 412 (474)
+|+.++...+.
T Consensus 297 ~~~~~~~~~~~~ 308 (316)
T 3bg1_A 297 WVCISDVNKGQG 308 (316)
T ss_dssp EEEEEECC----
T ss_pred EEEeeeccCCCC
Confidence 67888876553
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.7e-38 Score=321.61 Aligned_cols=265 Identities=15% Similarity=0.269 Sum_probs=230.2
Q ss_pred CCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCC
Q 011970 128 PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD 207 (474)
Q Consensus 128 ~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D 207 (474)
|...|.++.| +|+.|++++ .| .+++|||+.+|++... +. +|...+.+++| +|++|++|+.|
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~----~d------g~i~iwd~~~~~~~~~---~~-~h~~~v~~l~~---~~~~l~sg~~d 192 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGL----RD------NTIKIWDKNTLECKRI---LT-GHTGSVLCLQY---DERVIITGSSD 192 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEE----SS------SCEEEEESSSCCEEEE---EC-CCSSCEEEEEC---CSSEEEEEETT
T ss_pred CCCcEEEEEE--CCCEEEEEe----CC------CeEEEEeCCCCeEEEE---Ec-CCCCcEEEEEE---CCCEEEEEcCC
Confidence 5567888776 899999976 45 6899999999987432 22 24456667777 57899999999
Q ss_pred CcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEE---EEEeecCcceeEEEEEecC
Q 011970 208 SIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL---KVFYHLLHRNKKVDFIEQF 282 (474)
Q Consensus 208 ~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L---~tl~~h~~~v~~V~F~~~~ 282 (474)
++|+|||+.+++++.++. ...|.+++|+++ .++++ +.|++|++||+++++.+ ..+.+|...+..++| +
T Consensus 193 g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~-~l~s~---s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~ 265 (435)
T 1p22_A 193 STVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTC---SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---D 265 (435)
T ss_dssp SCEEEEESSSCCEEEEECCCCSCEEEEECCTT-EEEEE---ETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---E
T ss_pred CeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC-EEEEe---eCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---C
Confidence 999999999999999886 468999999865 66666 45899999999998766 678889999999998 4
Q ss_pred CCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCC
Q 011970 283 NEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCN 360 (474)
Q Consensus 283 ~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~ 360 (474)
+..+++++.|++|++||+++++++..+.+|...+.+++| +++++++++ |++|++||++ |+++.++.+|...
T Consensus 266 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~----- 338 (435)
T 1p22_A 266 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL----- 338 (435)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSC-----
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCc-----
Confidence 788999999999999999999999999999999999988 578999998 9999999995 9999999999987
Q ss_pred eeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe---------EEEEecCCCCCCCCccccCCCCCCccccc
Q 011970 361 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK---------CLAKINATNCSPKVDDELGSSSTGKSKKL 431 (474)
Q Consensus 361 v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~---------cl~tl~gH~~~~~~~~~~~~~~~~~~~~~ 431 (474)
|.+++| |+++|++|+. ||+|+|||+.+++ |+.++.+|..
T Consensus 339 v~~~~~--~~~~l~sg~~-----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~------------------- 386 (435)
T 1p22_A 339 VRCIRF--DNKRIVSGAY-----------DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG------------------- 386 (435)
T ss_dssp EEEEEC--CSSEEEEEET-----------TSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS-------------------
T ss_pred EEEEEe--cCCEEEEEeC-----------CCcEEEEECCCCCCccccccchheeeccCCCC-------------------
Confidence 688888 8999999987 9999999998888 9999999986
Q ss_pred cccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 432 NKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 432 ~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.|++++| |++.|+||+.||+|++||.
T Consensus 387 ---------------~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 387 ---------------RVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp ---------------CCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred ---------------CeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 8999999 8899999999999999984
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.2e-38 Score=320.50 Aligned_cols=276 Identities=11% Similarity=0.133 Sum_probs=229.7
Q ss_pred ccccEEEEEeeccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEe
Q 011970 87 KRTKVIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (474)
Q Consensus 87 ~~~~V~~i~~s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw 166 (474)
+...|..+.+.++.||+++.||+|++||..+++++.++.+ |...|.++.| +++.|++++ .| +++++|
T Consensus 132 ~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~sg~----~d------g~i~vw 198 (435)
T 1p22_A 132 TSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY--DERVIITGS----SD------STVRVW 198 (435)
T ss_dssp SCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEEC--CSSEEEEEE----TT------SCEEEE
T ss_pred CCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEE--CCCEEEEEc----CC------CeEEEE
Confidence 5567899999999999999999999999999999999997 7788999999 889999976 45 699999
Q ss_pred EeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEE---EEEc--CCcEEEEEEcCCceEE
Q 011970 167 YIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML---YSIS--DKHVQEIKISPGIMLL 241 (474)
Q Consensus 167 ~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l---~tl~--~~~V~~vafSpg~~la 241 (474)
++.+|++... +. .+...+..++|+ +.+|++|+.|++|++||+.+++.+ ..+. ...|.+++| .+..++
T Consensus 199 d~~~~~~~~~---~~-~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~ 270 (435)
T 1p22_A 199 DVNTGEMLNT---LI-HHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIV 270 (435)
T ss_dssp ESSSCCEEEE---EC-CCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEE
T ss_pred ECCCCcEEEE---Ec-CCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEE
Confidence 9999987442 22 234566788886 348999999999999999988754 4443 468999999 566777
Q ss_pred EEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEE
Q 011970 242 IFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIF 321 (474)
Q Consensus 242 ~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~F 321 (474)
++ +.|++|++||+++++++.++.+|...+..++|. +..+++++.|++|+|||+++++++.++.+|...|.+++|
T Consensus 271 s~---~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 344 (435)
T 1p22_A 271 SA---SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 344 (435)
T ss_dssp EE---ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC
T ss_pred EE---eCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe
Confidence 76 448999999999999999999999999999984 678899999999999999999999999999999999988
Q ss_pred cCCCcEEEEEc-CCcEEEEeCC-Cc---------EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCC
Q 011970 322 LYENQLFLTFR-NRTVAVWNFR-GE---------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSA 390 (474)
Q Consensus 322 spdg~llaS~s-D~tIklWd~~-G~---------ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~D 390 (474)
++++|++++ |++|++||+. ++ ++.++.+|... |.+++| ||++|++++. |
T Consensus 345 --~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~--~~~~l~s~s~-----------D 404 (435)
T 1p22_A 345 --DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR-----VFRLQF--DEFQIVSSSH-----------D 404 (435)
T ss_dssp --CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSC-----CCCEEE--CSSCEEECCS-----------S
T ss_pred --cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCC-----eEEEEe--CCCEEEEEeC-----------C
Confidence 889999999 9999999984 66 99999999987 678988 8999999876 9
Q ss_pred CeEEEEeCCCCeEEEEecC
Q 011970 391 GSINVSSILTGKCLAKINA 409 (474)
Q Consensus 391 gtIklWdi~tG~cl~tl~g 409 (474)
|+|+|||+.++........
T Consensus 405 g~i~iwd~~~~~~~~~~~~ 423 (435)
T 1p22_A 405 DTILIWDFLNDPAAQAEPP 423 (435)
T ss_dssp SEEEEEC------------
T ss_pred CEEEEEECCCCCCcccCCC
Confidence 9999999988776655443
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.9e-37 Score=313.07 Aligned_cols=283 Identities=15% Similarity=0.252 Sum_probs=237.4
Q ss_pred eeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEE
Q 011970 113 FSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVE 192 (474)
Q Consensus 113 W~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~ 192 (474)
|....-+....|.++...++.+ ++++|+.|++++ .| ++++||++.+|++... +. +|...+.+++
T Consensus 103 w~~~~~~~~~~l~~h~~~v~~~--~~~~g~~l~sg~----~d------g~i~vwd~~~~~~~~~---~~-~h~~~v~~~~ 166 (445)
T 2ovr_B 103 WRRGELKSPKVLKGHDDHVITC--LQFCGNRIVSGS----DD------NTLKVWSAVTGKCLRT---LV-GHTGGVWSSQ 166 (445)
T ss_dssp HHHSCCCCCEEEECSTTSCEEE--EEEETTEEEEEE----TT------SCEEEEETTTCCEEEE---CC-CCSSCEEEEE
T ss_pred ccCCCcceeEEecccCCCcEEE--EEEcCCEEEEEE----CC------CcEEEEECCCCcEEEE---Ec-CCCCCEEEEE
Confidence 5444445677888844445555 556799999976 45 6999999999987442 22 2455677899
Q ss_pred EeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecC
Q 011970 193 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLL 270 (474)
Q Consensus 193 Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~ 270 (474)
|+ +.+|++|+.|++|++||+++++++.++. ...|.+++|+++ .++++ +.|++|++||+++|+++.++.+|.
T Consensus 167 ~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~-~l~s~---s~dg~i~~wd~~~~~~~~~~~~~~ 239 (445)
T 2ovr_B 167 MR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-RVVSG---SRDATLRVWDIETGQCLHVLMGHV 239 (445)
T ss_dssp EE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT-EEEEE---ETTSEEEEEESSSCCEEEEEECCS
T ss_pred ec---CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCC-EEEEE---eCCCEEEEEECCCCcEEEEEcCCc
Confidence 97 4699999999999999999999999986 467999999854 56665 457999999999999999999999
Q ss_pred cceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEE
Q 011970 271 HRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTS 348 (474)
Q Consensus 271 ~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~t 348 (474)
..+..++| ++..+++++.|++|++||+++++++..+.+|...+.++.| +++++++++ |++|++||++ |+++.+
T Consensus 240 ~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~ 314 (445)
T 2ovr_B 240 AAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT 314 (445)
T ss_dssp SCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred ccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEE
Confidence 99999998 4788999999999999999999999999999999999999 889999998 9999999995 999999
Q ss_pred eccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcc
Q 011970 349 FEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKS 428 (474)
Q Consensus 349 l~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~ 428 (474)
+.+|... +..+.+ ++++|++++. ||+|++||+.+|+++.++.+|..+.
T Consensus 315 ~~~~~~~-----v~~~~~--~~~~l~~~~~-----------dg~i~vwd~~~~~~~~~~~~~~~~~-------------- 362 (445)
T 2ovr_B 315 LTGHQSL-----TSGMEL--KDNILVSGNA-----------DSTVKIWDIKTGQCLQTLQGPNKHQ-------------- 362 (445)
T ss_dssp ECCCCSC-----EEEEEE--ETTEEEEEET-----------TSCEEEEETTTCCEEEEECSTTSCS--------------
T ss_pred EcCCccc-----EEEEEE--eCCEEEEEeC-----------CCeEEEEECCCCcEEEEEccCCCCC--------------
Confidence 9999876 455554 7889999986 9999999999999999999843210
Q ss_pred ccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 429 KKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 429 ~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
..|++++|+ ++.|++|+.||+|++||.
T Consensus 363 -----------------~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 363 -----------------SAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp -----------------SCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred -----------------CCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 189999996 689999999999999984
No 102
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=9.2e-36 Score=295.65 Aligned_cols=276 Identities=12% Similarity=0.110 Sum_probs=227.2
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCcc
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~ 177 (474)
+.++++++.|++|++||..+|+++..+.+ | ..+.+++|+|+|+.|+.++ +.+ .++++||+.+|++..
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~~~---~~d------~~i~v~d~~~~~~~~-- 68 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPV-G-SNPMGAVISPDGTKVYVAN---AHS------NDVSIIDTATNNVIA-- 68 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEEC-S-SSEEEEEECTTSSEEEEEE---GGG------TEEEEEETTTTEEEE--
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeec-C-CCcceEEECCCCCEEEEEC---CCC------CeEEEEECCCCeEEE--
Confidence 35789999999999999999999999986 5 3489999999999874332 344 689999999998743
Q ss_pred ceeeeccccCceEEEEeCCCCeEE-EEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCc-eEEEEecCCCCccEEE
Q 011970 178 ALFESESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGI-MLLIFNRSSSHVPLKI 254 (474)
Q Consensus 178 ~lf~~~~~~~~~~V~Fs~~nGk~L-aS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~-~la~~s~~s~D~tIkL 254 (474)
.+... ..+..++|+ |||+.| ++++.|++|++||+++++++..+. ...+.+++|+|++ .++.+. +.|++|++
T Consensus 69 -~~~~~--~~v~~~~~s-pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--~~~~~v~~ 142 (391)
T 1l0q_A 69 -TVPAG--SSPQGVAVS-PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTN--NGDKTVSV 142 (391)
T ss_dssp -EEECS--SSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEE--TTTTEEEE
T ss_pred -EEECC--CCccceEEC-CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEe--CCCCEEEE
Confidence 22222 267789998 799876 566678999999999999988876 4679999999854 454443 55889999
Q ss_pred EecCCCeEEEEEeecCcceeEEEEEecCCCeEEE-EeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-
Q 011970 255 LSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV-KQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR- 332 (474)
Q Consensus 255 Wdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~-~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s- 332 (474)
||+.+|+++.++..| ..+..++|+ |++..+++ ++.|++|++||+++++++..+.. ...+..++|+|+|++|++++
T Consensus 143 ~d~~~~~~~~~~~~~-~~~~~~~~~-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 143 INTVTKAVINTVSVG-RSPKGIAVT-PDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp EETTTTEEEEEEECC-SSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEE
T ss_pred EECCCCcEEEEEecC-CCcceEEEC-CCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEec
Confidence 999999999999876 456899987 66777754 56899999999999999887664 45889999999999887764
Q ss_pred ---CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEE-EEEecCCCccccccCCCCeEEEEeCCCCeEEEEe
Q 011970 333 ---NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI-ISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 333 ---D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~L-aS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl 407 (474)
|++|++||+. ++++.++..|.. +..++|+|||++| ++++. |++|++||+.+|++++++
T Consensus 220 ~~~~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~s~~~-----------d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 220 DKYFNTVSMIDTGTNKITARIPVGPD------PAGIAVTPDGKKVYVALSF-----------XNTVSVIDTATNTITATM 282 (391)
T ss_dssp CSSCCEEEEEETTTTEEEEEEECCSS------EEEEEECTTSSEEEEEETT-----------TTEEEEEETTTTEEEEEE
T ss_pred CcCCCcEEEEECCCCeEEEEEecCCC------ccEEEEccCCCEEEEEcCC-----------CCEEEEEECCCCcEEEEE
Confidence 7899999995 999999998764 5789999999988 55544 999999999999999999
Q ss_pred cCCCC
Q 011970 408 NATNC 412 (474)
Q Consensus 408 ~gH~~ 412 (474)
..|..
T Consensus 283 ~~~~~ 287 (391)
T 1l0q_A 283 AVGKN 287 (391)
T ss_dssp ECSSS
T ss_pred ECCcC
Confidence 98874
No 103
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.3e-37 Score=291.39 Aligned_cols=258 Identities=13% Similarity=0.178 Sum_probs=211.1
Q ss_pred EeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCc-cceeeeccccCceEEEEeCC-CCeE
Q 011970 123 FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG-FALFESESLKWPGFVEFDDV-NGKV 200 (474)
Q Consensus 123 ~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~-~~lf~~~~~~~~~~V~Fs~~-nGk~ 200 (474)
++.+ |.+.|.+++|+|+|+.|++++ .| .+++||++..+..... ...+. ++...+..++|++. ||++
T Consensus 6 ~~~g-H~~~v~~~~~~~~~~~l~~~~----~d------g~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~ 73 (351)
T 3f3f_A 6 FDSG-HDDLVHDVVYDFYGRHVATCS----SD------QHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRI 73 (351)
T ss_dssp EECC-CSSCEEEEEECSSSSEEEEEE----TT------SEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSE
T ss_pred cCcc-cccceeEEEEcCCCCEEEEee----CC------CeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCE
Confidence 4555 889999999999999999976 45 6999999987653211 01122 24566779999843 6999
Q ss_pred EEEecCCCcEEEeecCCC---------eEEEEEc--CCcEEEEEEcCC---ceEEEEecCCCCccEEEEecCCCeEEEEE
Q 011970 201 LTYSAQDSIYKVFDLKNY---------TMLYSIS--DKHVQEIKISPG---IMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (474)
Q Consensus 201 LaS~s~D~tiKlWdl~tg---------~~l~tl~--~~~V~~vafSpg---~~la~~s~~s~D~tIkLWdi~tG~~L~tl 266 (474)
|++++.|++|+|||+.++ +++.++. ...|.+++|+|+ ..++++ +.|++|+|||+++++++.++
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~---~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACL---GNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEE---ETTCEEEEEECSSTTCTTCC
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEe---cCCCcEEEecCCChHHhccc
Confidence 999999999999999987 5677775 468999999984 456665 45899999999999877665
Q ss_pred e-------------ecCcceeEEEEEec--CCCeEEEEeCCCcEEEEECCCCce--EEeccccCCceEEEEEcCCC----
Q 011970 267 Y-------------HLLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNAEL--MEVSRTEFMTPSAFIFLYEN---- 325 (474)
Q Consensus 267 ~-------------~h~~~v~~V~F~~~--~~~~ll~~~~D~tIkIWDv~tg~~--~~~l~~h~~~v~sv~Fspdg---- 325 (474)
. .|...+..++|++. .+..+++++.|+.+.+|+..+++. +..+.+|...|.+++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcc
Confidence 4 57778899999853 377888899999999999888876 67788999999999999998
Q ss_pred cEEEEEc-CCcEEEEeCC-C----------------------------------------------cEEEEeccCCCCcC
Q 011970 326 QLFLTFR-NRTVAVWNFR-G----------------------------------------------ELVTSFEDHLLWHP 357 (474)
Q Consensus 326 ~llaS~s-D~tIklWd~~-G----------------------------------------------~ll~tl~gH~~~~~ 357 (474)
++|++++ |++|++||++ + +++.++.+|...
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-- 308 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE-- 308 (351)
T ss_dssp EEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC--
T ss_pred eEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc--
Confidence 8999999 9999999995 4 788899999887
Q ss_pred CCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCC---eEEEEecCCC
Q 011970 358 DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG---KCLAKINATN 411 (474)
Q Consensus 358 ~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG---~cl~tl~gH~ 411 (474)
|++++|+|||++|||++. ||+|+|||+.++ +|+.++..|+
T Consensus 309 ---v~~~~~s~~~~~l~s~~~-----------dg~v~iw~~~~~~~~~~~~~~~~~~ 351 (351)
T 3f3f_A 309 ---VWSVSWNLTGTILSSAGD-----------DGKVRLWKATYSNEFKCMSVITAQQ 351 (351)
T ss_dssp ---EEEEEECSSSCCEEEEET-----------TSCEEEEEECTTSCEEEEEEEC---
T ss_pred ---EEEEEEcCCCCEEEEecC-----------CCcEEEEecCcCcchhheeehcccC
Confidence 799999999999999987 999999999988 5667766653
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=296.29 Aligned_cols=237 Identities=14% Similarity=0.189 Sum_probs=202.2
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecC--CCeEEEEEc--CCcEEEEEEcC---CceEEEEecCCCCccEEEEe
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLKILS 256 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~--tg~~l~tl~--~~~V~~vafSp---g~~la~~s~~s~D~tIkLWd 256 (474)
|...|.+++|+ |||++||+|+.|++|+|||+. +++++.++. ...|.+++|+| +..|+++ +.|++|+|||
T Consensus 10 h~~~v~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~---~~dg~v~iwd 85 (379)
T 3jrp_A 10 HNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVLIWK 85 (379)
T ss_dssp CCCCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE---ETTSCEEEEE
T ss_pred CcccEEEEEEc-CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEe---ccCCEEEEEE
Confidence 55678899998 799999999999999999998 566777775 46899999984 5677766 4479999999
Q ss_pred cCCCe--EEEEEeecCcceeEEEEEecC-CCeEEEEeCCCcEEEEECCCCc--eEEeccccCCceEEEEEcC--------
Q 011970 257 IEDGT--VLKVFYHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNAE--LMEVSRTEFMTPSAFIFLY-------- 323 (474)
Q Consensus 257 i~tG~--~L~tl~~h~~~v~~V~F~~~~-~~~ll~~~~D~tIkIWDv~tg~--~~~~l~~h~~~v~sv~Fsp-------- 323 (474)
+++|+ ++..+.+|...+..++|++.. +..+++++.|++|+|||+++++ ....+.+|...|.+++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 99998 788888899999999998432 6788889999999999999984 3445678999999999999
Q ss_pred -----CCcEEEEEc-CCcEEEEeCC-Cc----EEEEeccCCCCcCCCCeeEEEECCC---CCEEEEEecCCCccccccCC
Q 011970 324 -----ENQLFLTFR-NRTVAVWNFR-GE----LVTSFEDHLLWHPDCNTNNIYITSD---QDLIISYCKAEPEDQWMEGS 389 (474)
Q Consensus 324 -----dg~llaS~s-D~tIklWd~~-G~----ll~tl~gH~~~~~~~~v~svafSpD---g~~LaS~s~~~~~~~~~~s~ 389 (474)
++++|++++ |++|++||++ ++ ++.++.+|... |.+++|+|| +++|++++.
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~-----v~~~~~sp~~~~~~~l~s~~~----------- 229 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPTVLLRSYLASVSQ----------- 229 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCCCSSSEEEEEEET-----------
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc-----EeEEEECCCCCCCCeEEEEeC-----------
Confidence 799999999 9999999984 43 67899999887 799999999 999999987
Q ss_pred CCeEEEEeCCCCe---EEEEecC--CCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEc
Q 011970 390 AGSINVSSILTGK---CLAKINA--TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN 464 (474)
Q Consensus 390 DgtIklWdi~tG~---cl~tl~g--H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs 464 (474)
||+|+|||+.+++ ....+.. |.. .|++++|+|||+.||+|+
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~----------------------------------~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPD----------------------------------VLWRASWSLSGNVLALSG 275 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSS----------------------------------CEEEEEECSSSCCEEEEE
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCC----------------------------------cEEEEEEcCCCCEEEEec
Confidence 9999999998874 2222222 442 899999999999999999
Q ss_pred CCCcEEEccC
Q 011970 465 RHGLVHVWSN 474 (474)
Q Consensus 465 ~DgtVklWd~ 474 (474)
.||+|++|+.
T Consensus 276 ~dg~i~iw~~ 285 (379)
T 3jrp_A 276 GDNKVTLWKE 285 (379)
T ss_dssp SSSSEEEEEE
T ss_pred CCCcEEEEeC
Confidence 9999999973
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=304.86 Aligned_cols=283 Identities=8% Similarity=0.104 Sum_probs=222.0
Q ss_pred ccccccEEEEEee--ccEEEEeeCCCeEEeeeccccc-----------eeeEeecCCC------------ceEEEEEEee
Q 011970 85 LMKRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNR-----------RICFLNVSPD------------EVIRSLFYNK 139 (474)
Q Consensus 85 ~~~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~-----------~l~~l~g~~~------------~~i~sv~fsp 139 (474)
+.+...|..+.|+ +++||+++.||+|++|++.+++ ++..+.+ |. +.|.+|.|+|
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCceEEEEEcC
Confidence 4467889999999 8999999999999999999888 6889997 76 7899999999
Q ss_pred CC--CEEEEEEeecCCCccceeeeEEEEeEeccCCCCC---------------------cc---------------ceee
Q 011970 140 NN--DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDS---------------------GF---------------ALFE 181 (474)
Q Consensus 140 dg--~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~---------------------~~---------------~lf~ 181 (474)
++ ..|++++ .| ++++||++..++... .+ ..+.
T Consensus 104 ~~~~~~l~s~s----~d------~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 104 QKNAAQFLLST----ND------KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCSSSEEEEEE----CS------SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CCCcceEEEeC----CC------CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 98 7899876 45 689999987644310 00 0122
Q ss_pred eccccCceEEEEeCCCCeEEEEecCCCcEEEeecC-CCeEEEEE---------cCCcEEEEEEcCC--ceEEEEecCCCC
Q 011970 182 SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSI---------SDKHVQEIKISPG--IMLLIFNRSSSH 249 (474)
Q Consensus 182 ~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~-tg~~l~tl---------~~~~V~~vafSpg--~~la~~s~~s~D 249 (474)
.+|...+.+++|+ |+|++|++| .|++|+|||+. +++++..+ +...|.+++|+|+ .+|+++ +.|
T Consensus 174 ~~h~~~v~~~~~~-~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~---~~d 248 (447)
T 3dw8_B 174 NAHTYHINSISIN-SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS---SSK 248 (447)
T ss_dssp SCCSSCCCEEEEC-TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE---ETT
T ss_pred cCCCcceEEEEEc-CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE---eCC
Confidence 2355667799998 799999999 79999999998 45566543 2457999999985 466665 458
Q ss_pred ccEEEEecCCCeE----EEEEeecCc------------ceeEEEEEecCCCeEEEEeCCCcEEEEECCC-CceEEecccc
Q 011970 250 VPLKILSIEDGTV----LKVFYHLLH------------RNKKVDFIEQFNEKLLVKQENENLQILDVRN-AELMEVSRTE 312 (474)
Q Consensus 250 ~tIkLWdi~tG~~----L~tl~~h~~------------~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~t-g~~~~~l~~h 312 (474)
++|+|||++++++ ++++.+|.. .+.+++|+ |++..|++++. ++|+|||+++ ++++.++.+|
T Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 249 GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFS-HSGRYMMTRDY-LSVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEEC-TTSSEEEEEES-SEEEEEETTCCSSCSCCEESC
T ss_pred CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEEC-CCCCEEEEeeC-CeEEEEeCCCCccccceeecc
Confidence 9999999999998 899998876 89999998 56778887888 9999999998 9999888888
Q ss_pred CCc---------------eEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCc-------------------
Q 011970 313 FMT---------------PSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWH------------------- 356 (474)
Q Consensus 313 ~~~---------------v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~------------------- 356 (474)
... +..++|+|+|++|++++ |++|+|||++ |+++ ++++|....
T Consensus 327 ~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (447)
T 3dw8_B 327 EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKK 405 (447)
T ss_dssp GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCT
T ss_pred ccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCccc
Confidence 642 22489999999999999 9999999996 7765 666664210
Q ss_pred ---------CCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeC
Q 011970 357 ---------PDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI 398 (474)
Q Consensus 357 ---------~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi 398 (474)
....|..++|+|+|++||+++. +.+.||+-
T Consensus 406 ~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~------------~~~~~~~~ 444 (447)
T 3dw8_B 406 DEISVDSLDFNKKILHTAWHPKENIIAVATT------------NNLYIFQD 444 (447)
T ss_dssp TCEEGGGCCTTSCCCEEEECSSSSEEEEECS------------SCEEEEEC
T ss_pred ccccccccccCCceeEEEECCCCCEEEEEec------------ceeeeecc
Confidence 0123678999999999999864 45888873
No 106
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=293.61 Aligned_cols=265 Identities=7% Similarity=0.049 Sum_probs=217.6
Q ss_pred ccccEEEEEee--c---cEEEEeeCCCeEEeeeccc-ccee-eEeecCCCceEEEEEEeeCCCEEEEEEeecCCCcccee
Q 011970 87 KRTKVIEIVAA--R---DIVFALAHSGVCAAFSRET-NRRI-CFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLK 159 (474)
Q Consensus 87 ~~~~V~~i~~s--~---~~las~s~dgtiklW~~~t-g~~l-~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk 159 (474)
|...|..|.|+ + ++||+++.||+|++|++.+ ++.+ ..+.+ |...|.+++|+|+|+.|++++ .|
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~----~d----- 107 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTAS----CD----- 107 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEE----TT-----
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEc----CC-----
Confidence 66777777777 2 7999999999999999998 7776 67776 889999999999999999976 45
Q ss_pred eeEEEEeEeccCCCCCccceeeeccccCceEEEE--eCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcC
Q 011970 160 CRSTKIEYIRRGKPDSGFALFESESLKWPGFVEF--DDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISP 236 (474)
Q Consensus 160 ~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~F--s~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSp 236 (474)
++++||++.++++.. ++. +...+..++| + |+|++|++++.|++|++||+.+++++.++. ...+..+.+.+
T Consensus 108 -g~v~iwd~~~~~~~~---~~~--~~~~v~~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (368)
T 3mmy_A 108 -KTAKMWDLSSNQAIQ---IAQ--HDAPVKTIHWIKA-PNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY 180 (368)
T ss_dssp -SEEEEEETTTTEEEE---EEE--CSSCEEEEEEEEC-SSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET
T ss_pred -CcEEEEEcCCCCcee---ecc--ccCceEEEEEEeC-CCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC
Confidence 699999999888632 333 3456778999 7 799999999999999999999999888887 35788888886
Q ss_pred CceEEEEecCCCCccEEEEecCCCeEEEEE-e-ecCcceeEEEEEecCCCe----EEEEeCCCcEEEEECCCC---ceEE
Q 011970 237 GIMLLIFNRSSSHVPLKILSIEDGTVLKVF-Y-HLLHRNKKVDFIEQFNEK----LLVKQENENLQILDVRNA---ELME 307 (474)
Q Consensus 237 g~~la~~s~~s~D~tIkLWdi~tG~~L~tl-~-~h~~~v~~V~F~~~~~~~----ll~~~~D~tIkIWDv~tg---~~~~ 307 (474)
... +++ ..++.+++|++.++...... . .+.+....+.+.. .... +++++.|++|+|||+.+. +++.
T Consensus 181 ~~~-~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 181 PMA-VVA---TAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp TEE-EEE---EGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred Cee-EEE---eCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 644 443 23689999999887554332 2 2345566666653 2322 888999999999999988 5667
Q ss_pred eccccCC------------ceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEE
Q 011970 308 VSRTEFM------------TPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI 373 (474)
Q Consensus 308 ~l~~h~~------------~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~L 373 (474)
.+.+|.. .|.+++|+|++++|++++ |++|+|||++ |+++.++.+|... |.+++|+|||++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l 330 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQP-----ISACCFNHNGNIF 330 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSC-----EEEEEECTTSSCE
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCC-----ceEEEECCCCCeE
Confidence 7777776 799999999999999999 9999999995 9999999999887 7999999999999
Q ss_pred EEEec
Q 011970 374 ISYCK 378 (474)
Q Consensus 374 aS~s~ 378 (474)
|+++.
T Consensus 331 ~~~s~ 335 (368)
T 3mmy_A 331 AYASS 335 (368)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99986
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=7.8e-36 Score=300.15 Aligned_cols=313 Identities=12% Similarity=0.088 Sum_probs=244.6
Q ss_pred EeeCCCeEEeeecc--cc--ceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccc
Q 011970 103 ALAHSGVCAAFSRE--TN--RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFA 178 (474)
Q Consensus 103 s~s~dgtiklW~~~--tg--~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~ 178 (474)
+++.++.+++|.+. ++ +.+..+.. + ..+.+++|+|++..+++ ++.+ .++++||+.+|++....+
T Consensus 94 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~-~-~~~~~~~~s~~~~~~~~----~~~~------~~i~~~d~~~g~~~~~~~ 161 (433)
T 3bws_A 94 RKPEELNEKLIALDKEGITHRFISRFKT-G-FQPKSVRFIDNTRLAIP----LLED------EGMDVLDINSGQTVRLSP 161 (433)
T ss_dssp SSGGGGTTCEEECCBTTCSEEEEEEEEC-S-SCBCCCEESSSSEEEEE----BTTS------SSEEEEETTTCCEEEECC
T ss_pred cccCCCceEEEEECCCCCcceEEEEEcC-C-CCceEEEEeCCCeEEEE----eCCC------CeEEEEECCCCeEeeecC
Confidence 56677755666543 35 67777775 4 34669999996665555 3455 689999999998743211
Q ss_pred eee-eccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCC-ceEEEEecCCCCccEEE
Q 011970 179 LFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPG-IMLLIFNRSSSHVPLKI 254 (474)
Q Consensus 179 lf~-~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg-~~la~~s~~s~D~tIkL 254 (474)
.-. ..+...+..++|+ |+|+++++++.|++|++||+++++++.++. ...+..++|+|+ ..+++++ +.|++|++
T Consensus 162 ~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~i~~ 238 (433)
T 3bws_A 162 PEKYKKKLGFVETISIP-EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSN--WISEDISV 238 (433)
T ss_dssp CHHHHTTCCEEEEEEEG-GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEE--TTTTEEEE
T ss_pred cccccccCCceeEEEEc-CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEe--cCCCcEEE
Confidence 101 1244566789996 799999999999999999999999998886 468999999984 4554553 45789999
Q ss_pred EecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEe--------CCCcEEEEECCCCceEEeccccCCceEEEEEcCCCc
Q 011970 255 LSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ--------ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ 326 (474)
Q Consensus 255 Wdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~--------~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~ 326 (474)
||+++|+++.++..+ ..+..++|+ |++..+++++ .|++|++||+.+++++... .|...+..++|+|+|+
T Consensus 239 ~d~~~~~~~~~~~~~-~~~~~~~~~-~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 239 IDRKTKLEIRKTDKI-GLPRGLLLS-KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTEN 315 (433)
T ss_dssp EETTTTEEEEECCCC-SEEEEEEEC-TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTT
T ss_pred EECCCCcEEEEecCC-CCceEEEEc-CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCC
Confidence 999999999999865 458899987 6777888876 4889999999999988775 4556889999999996
Q ss_pred -EEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCc----cccccCCCCeEEEEeCC
Q 011970 327 -LFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPE----DQWMEGSAGSINVSSIL 399 (474)
Q Consensus 327 -llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~----~~~~~s~DgtIklWdi~ 399 (474)
++++++ |++|++||++ |+++..+. |... +..++|+|||++|++++..... --.+++.||+|++||+.
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~-----~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDK-----PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CSSS-----EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEec-CCCC-----CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence 556767 9999999995 88988886 4433 6899999999999988752110 01345568999999999
Q ss_pred CCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcC-CCcEEEccC
Q 011970 400 TGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR-HGLVHVWSN 474 (474)
Q Consensus 400 tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~-DgtVklWd~ 474 (474)
+|+++..+.++. .+.+++|+|||+.|++++. |++|++|+.
T Consensus 390 ~~~~~~~~~~~~-----------------------------------~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 390 TDTVKEFWEAGN-----------------------------------QPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp TTEEEEEEECSS-----------------------------------SEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEecCCC-----------------------------------CCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 999999998765 7899999999999998775 999999973
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.6e-37 Score=312.02 Aligned_cols=227 Identities=14% Similarity=0.145 Sum_probs=170.5
Q ss_pred EeCCCCeEEEEecCCCcEEEeecCCCeEEE--E---E--cCCcEEEEEEcC---------CceEEEEecCCCCccEEEEe
Q 011970 193 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--S---I--SDKHVQEIKISP---------GIMLLIFNRSSSHVPLKILS 256 (474)
Q Consensus 193 Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~--t---l--~~~~V~~vafSp---------g~~la~~s~~s~D~tIkLWd 256 (474)
+.++++++||+++.|++|||||++++++.. . + |.+.|++|+|+| |.+||++ +.|++|||||
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~---s~D~tv~~Wd 172 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASV---GDDCTLIIWR 172 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE---ETTSEEEEEE
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEE---ECCCeEEEEE
Confidence 335899999999999999999999998653 2 2 346899999997 4456655 5699999999
Q ss_pred cCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEe-------------------------ccc
Q 011970 257 IEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV-------------------------SRT 311 (474)
Q Consensus 257 i~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~-------------------------l~~ 311 (474)
++++.++.++..|...+.+|+|+|.+..+|++++.|++|+|||++++++... ..+
T Consensus 173 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 173 LTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp EETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 9999998888888899999999853334677789999999999999875432 246
Q ss_pred cCCceEEEEEc-CCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCC-------------------
Q 011970 312 EFMTPSAFIFL-YENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSD------------------- 369 (474)
Q Consensus 312 h~~~v~sv~Fs-pdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpD------------------- 369 (474)
|...+..+.|+ |||+.+++++ |++|++||+. ++....+.+|... ++.+.++|+
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMK-----LGPKNLLPNVQGISLFPSLLGACPHPRY 327 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------------------------CCSCSEEEECSSCCSSCCEECSSC
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCc-----cccEEEccccccccccCcceeEEEccCC
Confidence 77888999986 8999999999 9999999995 8888888888765 344545443
Q ss_pred -CCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCE
Q 011970 370 -QDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDI 448 (474)
Q Consensus 370 -g~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V 448 (474)
+.++++|+. ||+|+|||+.+|+++.++.+|.. .|
T Consensus 328 ~~~~~~sgs~-----------Dg~V~lwd~~~~~~~~~~~~~~~----------------------------------~V 362 (393)
T 4gq1_A 328 MDYFATAHSQ-----------HGLIQLINTYEKDSNSIPIQLGM----------------------------------PI 362 (393)
T ss_dssp TTEEEEEETT-----------TTEEEEEETTCTTCCEEEEECSS----------------------------------CE
T ss_pred CCEEEEEECC-----------CCEEEEEECCCCcEEEEecCCCC----------------------------------cE
Confidence 345666654 99999999999999999999885 89
Q ss_pred EEEEEcCCCCEEEEEcCCCc--EEEc
Q 011970 449 TSLFYDEERNEIYTGNRHGL--VHVW 472 (474)
Q Consensus 449 ~slafSpDg~~LaSgs~Dgt--VklW 472 (474)
++|+|||||++||+|+.||. |+||
T Consensus 363 ~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 363 VDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp EEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 99999999999999999886 4444
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-37 Score=333.03 Aligned_cols=255 Identities=10% Similarity=0.044 Sum_probs=204.2
Q ss_pred CceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCC
Q 011970 129 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS 208 (474)
Q Consensus 129 ~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~ 208 (474)
..+|.+|+|||||++|||+| .| .+++ +...++.. . +|.+.++.|+|+ |+| .|+
T Consensus 15 ~~~v~sv~~SpDG~~iASas----~D------~TV~--d~~~~~~l------~-gh~~~v~~V~Fs-Pdg-------~~~ 67 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTF----PD------ISIG--QPKYAKDI------N-CNSKNLFHVKEF-PLE-------FEN 67 (588)
T ss_dssp SSSSCCEEECTTSCEEEECS----SS------EEEE--EECCCSCC------S-SBGGGTEEEEEE-CCC-------CCC
T ss_pred hccEEEEEECCCCCEEEEEc----CC------ceee--ccccccee------c-CCCccEEEEEEC-CCC-------Ccc
Confidence 46799999999999999954 77 7777 55555542 2 356778899999 799 577
Q ss_pred cEEEeecCCCeEEEEE-cCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEeecCc-----ceeEEEEEec
Q 011970 209 IYKVFDLKNYTMLYSI-SDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH-----RNKKVDFIEQ 281 (474)
Q Consensus 209 tiKlWdl~tg~~l~tl-~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~-----~v~~V~F~~~ 281 (474)
++++|+.+.. .+.++ +...|.+|+||| |.+||++ +.|++|+|||.++ ++.++. |.. .+.+|+|+ |
T Consensus 68 ~~~~~~~~~~-~~~~~~~~~~V~~vawSPdG~~LAs~---s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafS-P 139 (588)
T 2j04_A 68 KLDFELAQQN-GLLNSQPVCYPRVCKPSPIDDWMAVL---SNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWN-P 139 (588)
T ss_dssp TTTTSCCCSS-CSSTTSCSCCEEEEEECSSSSCEEEE---ETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEEC-S
T ss_pred eEEEEeCCCc-eEeecCCCCcEEEEEECCCCCEEEEE---eCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEc-C
Confidence 7777765422 23332 257899999998 5567766 4589999999644 888888 544 49999998 7
Q ss_pred CCCeEEEEeCCCcEEEEECCCCce-------EEec----cccCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-Cc---EE
Q 011970 282 FNEKLLVKQENENLQILDVRNAEL-------MEVS----RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GE---LV 346 (474)
Q Consensus 282 ~~~~ll~~~~D~tIkIWDv~tg~~-------~~~l----~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~---ll 346 (474)
+|..|+++++|++|+|||+.++++ ++++ .+|..+|.+++||||| ++++++|++|++||+. ++ .+
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCE
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccce
Confidence 899999999999999999999864 5665 7788999999999999 5444449999999996 45 34
Q ss_pred EEe-ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCC
Q 011970 347 TSF-EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSST 425 (474)
Q Consensus 347 ~tl-~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~ 425 (474)
++| .+|... |++|+|+ |++|||++ |++|+|||+.+++......||+.
T Consensus 219 ~tL~~~h~~~-----V~svaFs--g~~LASa~------------~~tIkLWd~~~~~~~~~~~gh~~------------- 266 (588)
T 2j04_A 219 RMIQNASRRK-----ITDLKIV--DYKVVLTC------------PGYVHKIDLKNYSISSLKTGSLE------------- 266 (588)
T ss_dssp EEEECCCSSC-----CCCEEEE--TTEEEEEC------------SSEEEEEETTTTEEEEEECSCCS-------------
T ss_pred eeecccccCc-----EEEEEEE--CCEEEEEe------------CCeEEEEECCCCeEEEEEcCCCc-------------
Confidence 678 478765 7899999 69999985 79999999988887544448986
Q ss_pred CccccccccccccccccccccCEEEEEE--cCCCCEEEEEcCCCcEEEcc
Q 011970 426 GKSKKLNKSSYIRSTVGEALEDITSLFY--DEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~l~~V~slaf--SpDg~~LaSgs~DgtVklWd 473 (474)
.|++++| ||||+.|+++++||+ |||.
T Consensus 267 ---------------------~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 267 ---------------------NFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp ---------------------CCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred ---------------------eEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 8999999 999999999999999 9996
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-36 Score=305.62 Aligned_cols=282 Identities=11% Similarity=0.142 Sum_probs=225.1
Q ss_pred ceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCC---CCCcccee--------------------ee----
Q 011970 130 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGK---PDSGFALF--------------------ES---- 182 (474)
Q Consensus 130 ~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~---~~~~~~lf--------------------~~---- 182 (474)
.++.+|+|||||++|++++ + ..+.+|++.+|+ .....+.- ..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~----~-------~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII----K-------NCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENEN 73 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE----T-------TEEEEEEEETTTEEEEEEEEECCC-------------------------
T ss_pred ccEEEEEecCCCCEEEEEe----C-------CeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccc
Confidence 3578999999999776543 3 479999999998 32211100 00
Q ss_pred --------------------------ccccCceEEEEeCCCCeEE-EEecCCCcEEEeecC--CCeEEEEEc----CCcE
Q 011970 183 --------------------------ESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLK--NYTMLYSIS----DKHV 229 (474)
Q Consensus 183 --------------------------~~~~~~~~V~Fs~~nGk~L-aS~s~D~tiKlWdl~--tg~~l~tl~----~~~V 229 (474)
.+...|.+++|+ |||++| |+++.|++|+|||+. +++++..+. ...|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v 152 (450)
T 2vdu_B 74 KKLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLT-SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRP 152 (450)
T ss_dssp --------------------------CCCCCEEEEEEC-TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCE
T ss_pred cccccCcCccccccCccccCCCCCCCccCCceEEEEEc-CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCc
Confidence 011257789998 799996 999999999999999 899888774 4689
Q ss_pred EEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEE----EEeecCcceeEEEEEecC---CCeEEEEeCCCcEEEEECC
Q 011970 230 QEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLK----VFYHLLHRNKKVDFIEQF---NEKLLVKQENENLQILDVR 301 (474)
Q Consensus 230 ~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~----tl~~h~~~v~~V~F~~~~---~~~ll~~~~D~tIkIWDv~ 301 (474)
.+++|+|+ .+|+++ +.|+.|++|++.+++... ++.+|...+.+|+|++ + +..|++++.|++|+|||+.
T Consensus 153 ~~~~~sp~~~~l~~~---~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 153 NAISIAEDDTTVIIA---DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEEECTTSSEEEEE---ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEES
T ss_pred eEEEEcCCCCEEEEE---eCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECC
Confidence 99999985 556655 347899999999988655 8889999999999984 5 5577778999999999999
Q ss_pred CCceEEe-ccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCC--------------------cCC
Q 011970 302 NAELMEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLW--------------------HPD 358 (474)
Q Consensus 302 tg~~~~~-l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~--------------------~~~ 358 (474)
+++++.. +.+|...|.+++|+ ||++|++++ |++|+|||+. |+++.++..|... ...
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence 9999877 77999999999999 999999999 9999999995 9999998754200 011
Q ss_pred CCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeC--CCC---eEEEEecCCCCCCCCccccCCCCCCccccccc
Q 011970 359 CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI--LTG---KCLAKINATNCSPKVDDELGSSSTGKSKKLNK 433 (474)
Q Consensus 359 ~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi--~tG---~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~ 433 (474)
..|..|+|+|||++|++++. .|++|+|||+ .++ +++.++.+|.
T Consensus 308 ~~v~~i~~~~~~~~l~~~~~----------~d~~i~iw~~~~~~~~~l~~~~~~~~~~---------------------- 355 (450)
T 2vdu_B 308 FAVSKIIKSKNLPFVAFFVE----------ATKCIIILEMSEKQKGDLALKQIITFPY---------------------- 355 (450)
T ss_dssp CCEEEEEECSSSSEEEEEET----------TCSEEEEEEECSSSTTCEEEEEEEECSS----------------------
T ss_pred EEEEEEEEeCCCCEEEEEEC----------CCCeEEEEEeccCCCCceeeccEeccCC----------------------
Confidence 23789999999999999872 2999999999 777 8899999984
Q ss_pred cccccccccccccCEEEEEEcCCCCEEEEEcC------CCcEEEcc
Q 011970 434 SSYIRSTVGEALEDITSLFYDEERNEIYTGNR------HGLVHVWS 473 (474)
Q Consensus 434 ~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~------DgtVklWd 473 (474)
.|++++|+|++..++.++. +..|+||.
T Consensus 356 -------------~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 356 -------------NVISLSAHNDEFQVTLDNKESSGVQKNFAKFIE 388 (450)
T ss_dssp -------------CEEEEEEETTEEEEEECCTTCCSSCCCSEEEEE
T ss_pred -------------ceEEEEecCCcEEEEEecccCCCCCCcceEEEE
Confidence 7999999997655555554 55688885
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.1e-36 Score=301.02 Aligned_cols=270 Identities=10% Similarity=0.123 Sum_probs=216.2
Q ss_pred EEEEeeCCCeEEeeecccc----ceeeEeecCCCceEEEEEEee-CCCEEEEEEeecCCCccceeeeEEEEeEeccCCCC
Q 011970 100 IVFALAHSGVCAAFSRETN----RRICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD 174 (474)
Q Consensus 100 ~las~s~dgtiklW~~~tg----~~l~~l~g~~~~~i~sv~fsp-dg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~ 174 (474)
++++++.||+|++|++.+. +.+..+.+ |...|.+++|+| +++.|++++ .| .+++||++..++..
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~s----~d------g~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCG-HTAPVLDIAWCPHNDNVIASGS----ED------CTVMVWEIPDGGLV 117 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCC-CSSCEEEEEECTTCTTEEEEEE----TT------SEEEEEECCTTCCS
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEec-CCCCEEEEEeCCCCCCEEEEEe----CC------CeEEEEEccCCCCc
Confidence 4446799999999998654 34556776 789999999999 999999976 55 69999999988542
Q ss_pred Cc----cceeeeccccCceEEEEeCCCC-eEEEEecCCCcEEEeecCCCeEEEEE----cCCcEEEEEEcC-CceEEEEe
Q 011970 175 SG----FALFESESLKWPGFVEFDDVNG-KVLTYSAQDSIYKVFDLKNYTMLYSI----SDKHVQEIKISP-GIMLLIFN 244 (474)
Q Consensus 175 ~~----~~lf~~~~~~~~~~V~Fs~~nG-k~LaS~s~D~tiKlWdl~tg~~l~tl----~~~~V~~vafSp-g~~la~~s 244 (474)
.. ...+. +|...+..|+|+ |+| .+|++++.|++|+|||+.+++++.++ +...|.+++|+| +..|+++
T Consensus 118 ~~~~~~~~~~~-~h~~~v~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 194 (402)
T 2aq5_A 118 LPLREPVITLE-GHTKRVGIVAWH-PTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS- 194 (402)
T ss_dssp SCBCSCSEEEE-CCSSCEEEEEEC-SSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE-
T ss_pred cccCCceEEec-CCCCeEEEEEEC-cCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE-
Confidence 11 11222 245677899998 687 69999999999999999999999999 356899999998 5566665
Q ss_pred cCCCCccEEEEecCCCeEEEEE-eecCcc-eeEEEEEecCCCeEEEE---eCCCcEEEEECCCCce-EEe-ccccCCceE
Q 011970 245 RSSSHVPLKILSIEDGTVLKVF-YHLLHR-NKKVDFIEQFNEKLLVK---QENENLQILDVRNAEL-MEV-SRTEFMTPS 317 (474)
Q Consensus 245 ~~s~D~tIkLWdi~tG~~L~tl-~~h~~~-v~~V~F~~~~~~~ll~~---~~D~tIkIWDv~tg~~-~~~-l~~h~~~v~ 317 (474)
+.|++|+|||+++|+++.++ .+|... +..+.|+ +++..++++ +.|++|+|||+++++. +.. ...|...+.
T Consensus 195 --~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 195 --CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV-SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp --ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC-STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE
T ss_pred --ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc-CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCcee
Confidence 45899999999999999999 677665 8999998 555555556 5899999999999765 333 235677899
Q ss_pred EEEEcCCCcEEE-EEc-CCcEEEEeCC-Cc-EEEEeccCC--CCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCC
Q 011970 318 AFIFLYENQLFL-TFR-NRTVAVWNFR-GE-LVTSFEDHL--LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG 391 (474)
Q Consensus 318 sv~Fspdg~lla-S~s-D~tIklWd~~-G~-ll~tl~gH~--~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dg 391 (474)
+++|+|++++|+ +++ |++|++||++ ++ ++..+..|. .. |.+++|+|||.+++++ |+
T Consensus 272 ~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~-----v~~~~~sp~~~~~~s~-------------~~ 333 (402)
T 2aq5_A 272 LPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKES-----QRGMGYMPKRGLEVNK-------------CE 333 (402)
T ss_dssp EEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSC-----CSEEEECCGGGSCGGG-------------TE
T ss_pred EEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCc-----ccceEEecccccceec-------------ce
Confidence 999999999886 666 9999999995 66 366666654 43 7899999999998864 77
Q ss_pred eEEEEeCCCCeEE
Q 011970 392 SINVSSILTGKCL 404 (474)
Q Consensus 392 tIklWdi~tG~cl 404 (474)
.+++|++.++++.
T Consensus 334 ~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 334 IARFYKLHERKCE 346 (402)
T ss_dssp EEEEEEEETTEEE
T ss_pred eEEEEEcCCCcEE
Confidence 9999999998774
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3e-36 Score=303.27 Aligned_cols=277 Identities=15% Similarity=0.157 Sum_probs=220.9
Q ss_pred EEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEecc-CCCCCccceeeeccccCceEEEEeCC-CCeEEEEecCCCcE
Q 011970 133 RSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR-GKPDSGFALFESESLKWPGFVEFDDV-NGKVLTYSAQDSIY 210 (474)
Q Consensus 133 ~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~-G~~~~~~~lf~~~~~~~~~~V~Fs~~-nGk~LaS~s~D~ti 210 (474)
..+++||+...++.. ++.| ..++||++.. |+.......+. +|...+..++|+ | ++++||+|+.|++|
T Consensus 38 ~~~~~~~~~~~~~~~---~~~~------g~i~v~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~-p~~~~~l~s~s~dg~v 106 (402)
T 2aq5_A 38 GFCAVNPKFMALICE---ASGG------GAFLVLPLGKTGRVDKNVPLVC-GHTAPVLDIAWC-PHNDNVIASGSEDCTV 106 (402)
T ss_dssp CSEEECSSEEEEEBC---CSSS------CCEEEEETTCCEECCTTCCCBC-CCSSCEEEEEEC-TTCTTEEEEEETTSEE
T ss_pred CcEEECCCeEEEEEE---EcCC------CEEEEEECccCCCCCCCCceEe-cCCCCEEEEEeC-CCCCCEEEEEeCCCeE
Confidence 347788877655431 3455 6899999844 44322223333 245677899998 6 99999999999999
Q ss_pred EEeecCCC-------eEEEEEc--CCcEEEEEEcCCc--eEEEEecCCCCccEEEEecCCCeEEEEE--eecCcceeEEE
Q 011970 211 KVFDLKNY-------TMLYSIS--DKHVQEIKISPGI--MLLIFNRSSSHVPLKILSIEDGTVLKVF--YHLLHRNKKVD 277 (474)
Q Consensus 211 KlWdl~tg-------~~l~tl~--~~~V~~vafSpg~--~la~~s~~s~D~tIkLWdi~tG~~L~tl--~~h~~~v~~V~ 277 (474)
+|||+.++ +++.++. ...|.+|+|+|++ .|+++ +.|++|+|||+++|+++.++ .+|...+.+++
T Consensus 107 ~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 183 (402)
T 2aq5_A 107 MVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSA---GCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVD 183 (402)
T ss_dssp EEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEE---ETTSCEEEEETTTTEEEEEECTTTCCSCEEEEE
T ss_pred EEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEE---cCCCEEEEEECCCCCccEEEecCCCCCceEEEE
Confidence 99999988 5566664 5689999999864 56665 45899999999999999999 78999999999
Q ss_pred EEecCCCeEEEEeCCCcEEEEECCCCceEEec-cccCCc-eEEEEEcCCCcEEEEE---c-CCcEEEEeCC-CcE-EEEe
Q 011970 278 FIEQFNEKLLVKQENENLQILDVRNAELMEVS-RTEFMT-PSAFIFLYENQLFLTF---R-NRTVAVWNFR-GEL-VTSF 349 (474)
Q Consensus 278 F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l-~~h~~~-v~sv~Fspdg~llaS~---s-D~tIklWd~~-G~l-l~tl 349 (474)
|+ |++..|++++.|++|+|||+++++++..+ .+|... +..++|+|+|++|+++ + |++|++||++ ++. +..+
T Consensus 184 ~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~ 262 (402)
T 2aq5_A 184 WS-RDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQ 262 (402)
T ss_dssp EC-TTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEE
T ss_pred EC-CCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEE
Confidence 98 57888999999999999999999999887 788776 8999999999999999 6 9999999995 553 3333
Q ss_pred c-cCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE-EEEecCCCCCCCCccccCCCCCCc
Q 011970 350 E-DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC-LAKINATNCSPKVDDELGSSSTGK 427 (474)
Q Consensus 350 ~-gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c-l~tl~gH~~~~~~~~~~~~~~~~~ 427 (474)
. +|... +..++|+|||++|+.++ +.|++|++||+.+++. +..+.+|.. .
T Consensus 263 ~~~~~~~-----v~~~~~s~~~~~l~~~g----------~~dg~i~i~d~~~~~~~~~~l~~~~~-~------------- 313 (402)
T 2aq5_A 263 ELDTSSG-----VLLPFFDPDTNIVYLCG----------KGDSSIRYFEITSEAPFLHYLSMFSS-K------------- 313 (402)
T ss_dssp ECCCCSS-----CEEEEEETTTTEEEEEE----------TTCSCEEEEEECSSTTCEEEEEEECC-S-------------
T ss_pred eccCCCc-----eeEEEEcCCCCEEEEEE----------cCCCeEEEEEecCCCcceEeeccccc-C-------------
Confidence 3 44444 68999999999997543 2399999999999984 777777652 0
Q ss_pred cccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 428 SKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 428 ~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
..|++++|+|||..+++ .|+.+++|+
T Consensus 314 ------------------~~v~~~~~sp~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 314 ------------------ESQRGMGYMPKRGLEVN--KCEIARFYK 339 (402)
T ss_dssp ------------------SCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred ------------------CcccceEEeccccccee--cceeEEEEE
Confidence 17999999999998875 567999997
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-35 Score=287.34 Aligned_cols=273 Identities=8% Similarity=0.040 Sum_probs=225.5
Q ss_pred ccccEEEEEee--ccEEEEeeCCCeEEeeeccccc---eeeEeecCCCceEEEEEEeeCCC-EEEEEEeecCCCccceee
Q 011970 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNR---RICFLNVSPDEVIRSLFYNKNND-SLITVSVYASDNFSSLKC 160 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~---~l~~l~g~~~~~i~sv~fspdg~-~Lis~S~~~s~d~s~Lk~ 160 (474)
|...|.++.|+ +++||+++.||+|++|++.+++ .+..+.+ |...|.+++|+|+|+ .|++++ .|
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~----~d------ 78 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGT----VQ------ 78 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEEEE----TT------
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEEEc----CC------
Confidence 66778888887 8999999999999999999888 3445554 778999999999999 999976 44
Q ss_pred eEEEEeEe-ccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCC---------CeEEEEEc-CCcE
Q 011970 161 RSTKIEYI-RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN---------YTMLYSIS-DKHV 229 (474)
Q Consensus 161 ~~~~iw~i-~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~t---------g~~l~tl~-~~~V 229 (474)
..+++|++ ..++.. .+....+...+..++|+ | +++|++++.|++|++||+.+ ++++.++. ...|
T Consensus 79 g~i~~wd~~~~~~~~---~~~~~~~~~~v~~l~~~-~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 153 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQ---ALTNNEANLGICRICKY-G-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKI 153 (342)
T ss_dssp SCEEEECSSSSSSEE---ECBSCCCCSCEEEEEEE-T-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCE
T ss_pred CeEEEEEeccCCceE---eccccCCCCceEEEEeC-C-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCce
Confidence 58999999 887751 12220034567789998 5 88999999999999999988 77666664 5689
Q ss_pred EEEEEcCCceEEEEecCCCCccEEEEecCC-CeE--EEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCC---
Q 011970 230 QEIKISPGIMLLIFNRSSSHVPLKILSIED-GTV--LKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNA--- 303 (474)
Q Consensus 230 ~~vafSpg~~la~~s~~s~D~tIkLWdi~t-G~~--L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg--- 303 (474)
.+++|+|+. ++++ +.|++|++||+++ ++. ......|...+.+++|++.++..+++++.|++|+|||+..+
T Consensus 154 ~~~~~~~~~-l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~ 229 (342)
T 1yfq_A 154 FTMDTNSSR-LIVG---MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDD 229 (342)
T ss_dssp EEEEECSSE-EEEE---ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCS
T ss_pred EEEEecCCc-EEEE---eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcc
Confidence 999999987 6665 3478999999998 654 33344677889999998317889999999999999999987
Q ss_pred ---ceEEeccccCC---------ceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccC-CCCcCCCCeeEEEECC
Q 011970 304 ---ELMEVSRTEFM---------TPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDH-LLWHPDCNTNNIYITS 368 (474)
Q Consensus 304 ---~~~~~l~~h~~---------~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH-~~~~~~~~v~svafSp 368 (474)
+++..+.+|.. .|.+++|+|++++|++++ |++|++||++ |+++.++.+| ... |.+++ |
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~-----v~~~~--~ 302 (342)
T 1yfq_A 230 YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS-----VVKIA--C 302 (342)
T ss_dssp TTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSE-----EEEEE--E
T ss_pred cccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCC-----ceEec--C
Confidence 77888888765 999999999999999999 9999999995 9999999998 876 68888 9
Q ss_pred CCCEEEEEecCCCccccccCCCCe-EEEEe
Q 011970 369 DQDLIISYCKAEPEDQWMEGSAGS-INVSS 397 (474)
Q Consensus 369 Dg~~LaS~s~~~~~~~~~~s~Dgt-IklWd 397 (474)
||++||+++. ||+ .+.+.
T Consensus 303 ~~~~l~s~s~-----------Dg~~~~~~~ 321 (342)
T 1yfq_A 303 SDNILCLATS-----------DDTFKTNAA 321 (342)
T ss_dssp CSSEEEEEEE-----------CTHHHHCSS
T ss_pred CCCeEEEEec-----------CCccccccc
Confidence 9999999987 888 55544
No 114
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1.6e-34 Score=309.38 Aligned_cols=319 Identities=9% Similarity=0.064 Sum_probs=248.9
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEe--ccCCCCC
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI--RRGKPDS 175 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i--~~G~~~~ 175 (474)
+.++++++.|++|++||..+|+++.++..++. +++++|||||++|++++ .| .++.+||+ .++++..
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~----~d------~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIG----RD------ARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEE----TT------SEEEEEETTSSSCEEEE
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEEC----CC------CeEEEEECcCCCCcEEE
Confidence 88999999999999999999999999995453 89999999999999876 33 48999999 7777644
Q ss_pred ccceeeeccccCceEEEEeCC----CCeEEEEec-CCCcEEEeecCCCeEEEEEcC-------------CcEEEEEEcC-
Q 011970 176 GFALFESESLKWPGFVEFDDV----NGKVLTYSA-QDSIYKVFDLKNYTMLYSISD-------------KHVQEIKISP- 236 (474)
Q Consensus 176 ~~~lf~~~~~~~~~~V~Fs~~----nGk~LaS~s-~D~tiKlWdl~tg~~l~tl~~-------------~~V~~vafSp- 236 (474)
.++ . -..|..|+|| | ||++|++++ .|++|+|||..+++++.++.. ..|.+|+|||
T Consensus 217 ~i~---~--g~~p~~va~s-p~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 217 EIK---I--GIEARSVESS-KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp EEE---C--CSEEEEEEEC-CSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred EEe---c--CCCcceEEeC-CCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC
Confidence 322 2 2457799998 8 999998888 489999999999999998853 2689999998
Q ss_pred CceEEEEecCCCCccEEEEecCCCeEEE--EEeecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEeccc--
Q 011970 237 GIMLLIFNRSSSHVPLKILSIEDGTVLK--VFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRT-- 311 (474)
Q Consensus 237 g~~la~~s~~s~D~tIkLWdi~tG~~L~--tl~~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~-- 311 (474)
+..++++. ..+++|.+||+.++++++ ++. +......+.|+ |++.+++++ ..|++|++||+.+++++.++..
T Consensus 291 ~~~~~vs~--~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~s-pdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~ 366 (543)
T 1nir_A 291 HPEFIVNV--KETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWD-SSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK 366 (543)
T ss_dssp SSEEEEEE--TTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEEC-TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred CCEEEEEE--CCCCeEEEEEecCCCcceeEEec-cCcCccCceEC-CCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC
Confidence 55555543 557899999999987766 443 45667889997 678878776 4789999999999999987654
Q ss_pred --cCCceEEEEEcCC-CcEEEEEc--CCcEEEEeC-C-------CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEec
Q 011970 312 --EFMTPSAFIFLYE-NQLFLTFR--NRTVAVWNF-R-------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 312 --h~~~v~sv~Fspd-g~llaS~s--D~tIklWd~-~-------G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
|......+ ++|+ |++++|++ |++|+|||. . +++++++++|..+ +..|+|+|||++|.+++.
T Consensus 367 ~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~-----~~~v~~~pdg~~l~v~~~ 440 (543)
T 1nir_A 367 TPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG-----SLFIKTHPKSSHLYVDTT 440 (543)
T ss_dssp SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-----CCCEECCTTCCEEEECCT
T ss_pred CCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC-----ceEEEcCCCCCcEEEecC
Confidence 65545454 4665 88899985 899999998 4 7899999999876 468999999999999762
Q ss_pred CCCccccccCCCCeEEEEeCCCCeEE-EEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCC
Q 011970 379 AEPEDQWMEGSAGSINVSSILTGKCL-AKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEER 457 (474)
Q Consensus 379 ~~~~~~~~~s~DgtIklWdi~tG~cl-~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg 457 (474)
-.++.. .+++|.+||+.|++++ .+|.-- -++.++++-+.|..++|+|||
T Consensus 441 ~~~~~~----~~~~v~v~d~~~~~~~~~~~~v~--------------------------~~~~~~~~~~~~~~~~~~~~g 490 (543)
T 1nir_A 441 FNPDAR----ISQSVAVFDLKNLDAKYQVLPIA--------------------------EWADLGEGAKRVVQPEYNKRG 490 (543)
T ss_dssp TCSSHH----HHTCEEEEETTCTTSCCEEECHH--------------------------HHHCCCSSCCEEEEEEECSSS
T ss_pred CCCCcc----cCceEEEEECCCCCCCeEEeech--------------------------hhcccCCCCCceEeccCCCCC
Confidence 111100 1689999999999988 555110 001111112389999999999
Q ss_pred CEEEEE-----cCCCcEEEccC
Q 011970 458 NEIYTG-----NRHGLVHVWSN 474 (474)
Q Consensus 458 ~~LaSg-----s~DgtVklWd~ 474 (474)
++|+.+ +.|++|.|||.
T Consensus 491 ~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 491 DEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp SEEEEEEECCTTSCCEEEEEET
T ss_pred CEEEEEeecCCCCCCeEEEEEC
Confidence 999966 35899999983
No 115
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-35 Score=286.40 Aligned_cols=253 Identities=11% Similarity=0.068 Sum_probs=202.3
Q ss_pred cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEec--cCCCCCccceeeeccccCceEEEEeC
Q 011970 118 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR--RGKPDSGFALFESESLKWPGFVEFDD 195 (474)
Q Consensus 118 g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~--~G~~~~~~~lf~~~~~~~~~~V~Fs~ 195 (474)
|+++.++++ |.+.|.+++|+|+|+.||+++ .| .+++||++. ++++.. .+. .|...+.+++|+
T Consensus 1 G~~~~~~~~-h~~~v~~~~~s~~~~~l~~~~----~d------g~i~iw~~~~~~~~~~~---~~~-~h~~~v~~~~~~- 64 (379)
T 3jrp_A 1 GSMVVIANA-HNELIHDAVLDYYGKRLATCS----SD------KTIKIFEVEGETHKLID---TLT-GHEGPVWRVDWA- 64 (379)
T ss_dssp ----CCEEE-CCCCEEEEEECSSSSEEEEEE----TT------SCEEEEEEETTEEEEEE---EEC-CCSSCEEEEEEC-
T ss_pred CCccEEecC-CcccEEEEEEcCCCCEEEEEE----CC------CcEEEEecCCCcceeee---Eec-CCCCcEEEEEeC-
Confidence 567788997 889999999999999999976 45 689999987 333321 122 245667799998
Q ss_pred CC--CeEEEEecCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcCC---ceEEEEecCCCCccEEEEecCCCe--EEE
Q 011970 196 VN--GKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISPG---IMLLIFNRSSSHVPLKILSIEDGT--VLK 264 (474)
Q Consensus 196 ~n--Gk~LaS~s~D~tiKlWdl~tg~--~l~tl~--~~~V~~vafSpg---~~la~~s~~s~D~tIkLWdi~tG~--~L~ 264 (474)
++ |++|++++.|++|+|||+.+++ ++..+. ...|.+++|+|+ ..++++ +.|++|++||+.+++ ...
T Consensus 65 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~---~~d~~i~v~d~~~~~~~~~~ 141 (379)
T 3jrp_A 65 HPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA---SSDGKVSVVEFKENGTTSPI 141 (379)
T ss_dssp CGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE---ETTSEEEEEECCTTSCCCEE
T ss_pred CCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEe---cCCCcEEEEecCCCCceeeE
Confidence 45 9999999999999999999997 666664 468999999985 456655 458999999999984 445
Q ss_pred EEeecCcceeEEEEEec------------CCCeEEEEeCCCcEEEEECCCCc----eEEeccccCCceEEEEEcCC---C
Q 011970 265 VFYHLLHRNKKVDFIEQ------------FNEKLLVKQENENLQILDVRNAE----LMEVSRTEFMTPSAFIFLYE---N 325 (474)
Q Consensus 265 tl~~h~~~v~~V~F~~~------------~~~~ll~~~~D~tIkIWDv~tg~----~~~~l~~h~~~v~sv~Fspd---g 325 (474)
.+.+|...+..++|++. ++..+++++.|++|+|||+++++ ++..+.+|...|.+++|+|+ +
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~ 221 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR 221 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCC
Confidence 67788899999999853 57888889999999999998875 55678899999999999999 9
Q ss_pred cEEEEEc-CCcEEEEeCC-Cc---EEEEec--cCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeC
Q 011970 326 QLFLTFR-NRTVAVWNFR-GE---LVTSFE--DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI 398 (474)
Q Consensus 326 ~llaS~s-D~tIklWd~~-G~---ll~tl~--gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi 398 (474)
++|++++ |++|+|||++ ++ ....+. +|... |.+++|+|||++|++++. ||+|+|||+
T Consensus 222 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l~~~~~-----------dg~i~iw~~ 285 (379)
T 3jrp_A 222 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSLSGNVLALSGG-----------DNKVTLWKE 285 (379)
T ss_dssp EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC-----EEEEEECSSSCCEEEEES-----------SSSEEEEEE
T ss_pred CeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCc-----EEEEEEcCCCCEEEEecC-----------CCcEEEEeC
Confidence 9999999 9999999995 53 333333 35554 799999999999999886 999999999
Q ss_pred CCCeEEE
Q 011970 399 LTGKCLA 405 (474)
Q Consensus 399 ~tG~cl~ 405 (474)
.++....
T Consensus 286 ~~~~~~~ 292 (379)
T 3jrp_A 286 NLEGKWE 292 (379)
T ss_dssp EETTEEE
T ss_pred CCCCccc
Confidence 8654433
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.8e-35 Score=292.64 Aligned_cols=227 Identities=10% Similarity=0.114 Sum_probs=186.8
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeE
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTV 262 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~ 262 (474)
|-..+.+|+|+ |||++||+|+.|+ ++|||+.+++++.......+..+++++ +..+++.+ +.|++|+|||+++|++
T Consensus 18 h~~~V~~v~fs-~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 18 VSNPVTDYEFN-QDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVT--GVKEVVHIWDDVKKQD 93 (355)
T ss_dssp -CCCCCEEEEC-TTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEEC--SSTTEEEEEETTTTEE
T ss_pred CCCceEEEEEC-CCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEE--CCccEEEEEECCCCcE
Confidence 34556799998 7999999998775 899999999988777655677888885 55555542 5578999999999999
Q ss_pred EEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCC-ceEEeccccCCceEEEEEcCCCcEEEE--Ec-CCcEEE
Q 011970 263 LKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNA-ELMEVSRTEFMTPSAFIFLYENQLFLT--FR-NRTVAV 338 (474)
Q Consensus 263 L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg-~~~~~l~~h~~~v~sv~Fspdg~llaS--~s-D~tIkl 338 (474)
+.++.+ ...+..+.|++ +.++++ .|++|+|||+.++ +++..+.+ ....++|+| ++++. ++ |++|+|
T Consensus 94 ~~~~~~-~~~v~~v~~~~---~~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 94 VSRIKV-DAPVKDLFLSR---EFIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEEEEC-SSCEEEEEECS---SEEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred EEEEEC-CCceEEEEEcC---CEEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEE
Confidence 999984 46899999863 444444 5889999999998 77766554 344566788 55555 46 999999
Q ss_pred EeCC-Cc----------------EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCe-EEEEeCCC
Q 011970 339 WNFR-GE----------------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGS-INVSSILT 400 (474)
Q Consensus 339 Wd~~-G~----------------ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dgt-IklWdi~t 400 (474)
||++ ++ ++.++.+|... |++++|+|||++|||++. |++ |+|||+.+
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~-----v~~~~~s~~g~~l~s~s~-----------d~~~v~iwd~~~ 227 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP-----IKMVRLNRKSDMVATCSQ-----------DGTIIRVFKTED 227 (355)
T ss_dssp EECCC------------------CCEEECCCSSC-----EEEEEECTTSSEEEEEET-----------TCSEEEEEETTT
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCc-----eEEEEECCCCCEEEEEeC-----------CCCEEEEEECCC
Confidence 9996 55 37899999987 799999999999999987 999 99999999
Q ss_pred CeEEEEec-C-CCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 401 GKCLAKIN-A-TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 401 G~cl~tl~-g-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
|+++.++. | |.. .|++|+|+|||+.||||+.|++|+|||.
T Consensus 228 ~~~~~~~~~g~h~~----------------------------------~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 228 GVLVREFRRGLDRA----------------------------------DVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp CCEEEEEECTTCCS----------------------------------CEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred CcEEEEEEcCCCCC----------------------------------cEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 99999998 6 875 8999999999999999999999999984
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-36 Score=296.81 Aligned_cols=225 Identities=8% Similarity=0.072 Sum_probs=191.0
Q ss_pred CCCeEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEecCCCCccEEEEec---------CCCeEEEEE
Q 011970 196 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSI---------EDGTVLKVF 266 (474)
Q Consensus 196 ~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi---------~tG~~L~tl 266 (474)
+|+++|++|+.|++|+|||+++++++.++....|..++|+|. ++++ +.|++|++|+. +++++++.+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~--~~s~---s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA--IISR---GPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS--EEEE---CSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc--eEEe---cCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 478999999999999999999999999888777889999998 6655 56899999954 477778777
Q ss_pred e-ecCcceeEEEEEec-CCCeEEEEeCCCcEEEEECCCCceEEecc-ccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC
Q 011970 267 Y-HLLHRNKKVDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSR-TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR 342 (474)
Q Consensus 267 ~-~h~~~v~~V~F~~~-~~~~ll~~~~D~tIkIWDv~tg~~~~~l~-~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~ 342 (474)
. +|...+..++|++. ++..+++++.|++|+|||+++++++.+.. .|...+.+++|+|||++|++++ |++|+|||++
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 7 67778999999731 67888889999999999999999987764 4556899999999999999998 9999999995
Q ss_pred -CcEE-EEecc-CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccc
Q 011970 343 -GELV-TSFED-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDE 419 (474)
Q Consensus 343 -G~ll-~tl~g-H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~ 419 (474)
++++ .+|++ |... |.+++|+|||++|++++ |++|+|||+.+++++.++..+... .
T Consensus 201 ~~~~~~~~~~~~h~~~-----v~~l~fs~~g~~l~s~~------------~~~v~iwd~~~~~~~~~~~~~~~~-~---- 258 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAK-----IKEVKFADNGYWMVVEC------------DQTVVCFDLRKDVGTLAYPTYTIP-E---- 258 (343)
T ss_dssp CTTSCCEECCCCTTSC-----EEEEEECTTSSEEEEEE------------SSBEEEEETTSSTTCBSSCCCBC-------
T ss_pred CCCCCccEEeccCCCC-----EEEEEEeCCCCEEEEEe------------CCeEEEEEcCCCCcceeecccccc-c----
Confidence 8887 89998 9886 79999999999999987 449999999999988777764320 0
Q ss_pred cCCCCCCccccccccccccccccccccCE--EEEEEcCCCCEEEEEcC-CCcEEEcc
Q 011970 420 LGSSSTGKSKKLNKSSYIRSTVGEALEDI--TSLFYDEERNEIYTGNR-HGLVHVWS 473 (474)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~V--~slafSpDg~~LaSgs~-DgtVklWd 473 (474)
..+ .+++|+|+|++|++|+. |+.|+||+
T Consensus 259 --------------------------~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 259 --------------------------FKTGTVTYDIDDSGKNMIAYSNESNSLTIYK 289 (343)
T ss_dssp -----------------------------CCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred --------------------------ccccceEEEECCCCCEEEEecCCCCcEEEEE
Confidence 022 46999999999999998 99999996
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.9e-33 Score=278.96 Aligned_cols=254 Identities=9% Similarity=0.099 Sum_probs=211.3
Q ss_pred eEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEE-EEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCC-
Q 011970 161 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPG- 237 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~L-aS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg- 237 (474)
.++++|++.+|++.. .+.. -..+..++|+ |||+.| ++++.|++|++||+.+++++.++. ...|.+++|+|+
T Consensus 12 ~~v~v~d~~~~~~~~---~~~~--~~~~~~~~~s-~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg 85 (391)
T 1l0q_A 12 DNISVIDVTSNKVTA---TIPV--GSNPMGAVIS-PDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG 85 (391)
T ss_dssp TEEEEEETTTTEEEE---EEEC--SSSEEEEEEC-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTS
T ss_pred CEEEEEECCCCeEEE---Eeec--CCCcceEEEC-CCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCC
Confidence 699999999998743 2222 1346789998 799876 788899999999999999998886 468999999984
Q ss_pred ceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEE-EEeCCCcEEEEECCCCceEEeccccCCce
Q 011970 238 IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLL-VKQENENLQILDVRNAELMEVSRTEFMTP 316 (474)
Q Consensus 238 ~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll-~~~~D~tIkIWDv~tg~~~~~l~~h~~~v 316 (474)
..|++++ +.|++|++||+++|+++..+.+| ..+..++|+ |++..++ +++.|++|++||+.+++++..+..|. .+
T Consensus 86 ~~l~~~~--~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~ 160 (391)
T 1l0q_A 86 KQVYVTN--MASSTLSVIDTTSNTVAGTVKTG-KSPLGLALS-PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SP 160 (391)
T ss_dssp SEEEEEE--TTTTEEEEEETTTTEEEEEEECS-SSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SE
T ss_pred CEEEEEE--CCCCEEEEEECCCCeEEEEEeCC-CCcceEEEC-CCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-Cc
Confidence 4455553 45789999999999999999865 467899997 6677774 56789999999999999998877664 67
Q ss_pred EEEEEcCCCcEE-EEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeE
Q 011970 317 SAFIFLYENQLF-LTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSI 393 (474)
Q Consensus 317 ~sv~Fspdg~ll-aS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtI 393 (474)
..++|+|+|+.+ ++++ |++|++||++ ++++..+..+. . +..++|+|||++|++++. ...|++|
T Consensus 161 ~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~-----~~~~~~~~~g~~l~~~~~--------~~~~~~v 226 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-A-----PSGIAVNPEGTKAYVTNV--------DKYFNTV 226 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-E-----EEEEEECTTSSEEEEEEE--------CSSCCEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-C-----ccceEECCCCCEEEEEec--------CcCCCcE
Confidence 999999999877 6777 9999999995 88888887543 2 689999999999998873 1138999
Q ss_pred EEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEE-EEEcCCCcEEEc
Q 011970 394 NVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEI-YTGNRHGLVHVW 472 (474)
Q Consensus 394 klWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~L-aSgs~DgtVklW 472 (474)
++||+.+++++.++..|. .+.+++|+|||+.| ++++.|++|++|
T Consensus 227 ~~~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~s~dg~~l~~s~~~d~~v~v~ 271 (391)
T 1l0q_A 227 SMIDTGTNKITARIPVGP-----------------------------------DPAGIAVTPDGKKVYVALSFXNTVSVI 271 (391)
T ss_dssp EEEETTTTEEEEEEECCS-----------------------------------SEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEECCCCeEEEEEecCC-----------------------------------CccEEEEccCCCEEEEEcCCCCEEEEE
Confidence 999999999999998876 67899999999987 788999999999
Q ss_pred cC
Q 011970 473 SN 474 (474)
Q Consensus 473 d~ 474 (474)
|.
T Consensus 272 d~ 273 (391)
T 1l0q_A 272 DT 273 (391)
T ss_dssp ET
T ss_pred EC
Confidence 84
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-35 Score=292.16 Aligned_cols=267 Identities=10% Similarity=0.046 Sum_probs=198.3
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCcc
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~ 177 (474)
+.+||+++.||+|++||+++|+++.++. ...|+++.|+|+ |+++| .| +++++|+...
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s----~D------~~i~~w~~~~------- 104 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRG----PC------NRLLLLYPGN------- 104 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEEC----ST------TEEEEEETTT-------
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEec----CC------CeEEEEEccC-------
Confidence 6788889999999999888888777776 233555555555 44432 33 3555554110
Q ss_pred ceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc---CCcEEEEEEcC--CceEEEEecCCCCccE
Q 011970 178 ALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS---DKHVQEIKISP--GIMLLIFNRSSSHVPL 252 (474)
Q Consensus 178 ~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~---~~~V~~vafSp--g~~la~~s~~s~D~tI 252 (474)
.+.+||+++++++..+. ...|.+++|+| ++.+++++ +.|++|
T Consensus 105 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~--s~dg~i 151 (343)
T 3lrv_A 105 -------------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWA--DNRGTI 151 (343)
T ss_dssp -------------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEE--ETTCCE
T ss_pred -------------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEE--eCCCcE
Confidence 23445666777666554 35799999999 55544432 458999
Q ss_pred EEEecCCCeEEEEEe-ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceE-Eeccc-cCCceEEEEEcCCCcEEE
Q 011970 253 KILSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM-EVSRT-EFMTPSAFIFLYENQLFL 329 (474)
Q Consensus 253 kLWdi~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~-~~l~~-h~~~v~sv~Fspdg~lla 329 (474)
+|||+++|+++..+. +|...+.+++|+ |++..+++++.|++|+|||+++++++ ..+.+ |...|.+++|+|+|++|+
T Consensus 152 ~~wd~~~~~~~~~~~~~~~~~i~~~~~~-pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~ 230 (343)
T 3lrv_A 152 GFQSYEDDSQYIVHSAKSDVEYSSGVLH-KDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMV 230 (343)
T ss_dssp EEEESSSSCEEEEECCCSSCCCCEEEEC-TTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEE
T ss_pred EEEECCCCcEEEEEecCCCCceEEEEEC-CCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEE
Confidence 999999999988875 445579999998 67778888899999999999999988 77887 999999999999999999
Q ss_pred EEcCCcEEEEeCC-CcEEEEecc---CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEE
Q 011970 330 TFRNRTVAVWNFR-GELVTSFED---HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLA 405 (474)
Q Consensus 330 S~sD~tIklWd~~-G~ll~tl~g---H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~ 405 (474)
+++|++|+|||++ ++++.+++. |...+. -..++|+|+|++||+++. .|++|+||++.+++...
T Consensus 231 s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~~s~----------~d~~i~v~~~~~~~~~~ 297 (343)
T 3lrv_A 231 VECDQTVVCFDLRKDVGTLAYPTYTIPEFKTG---TVTYDIDDSGKNMIAYSN----------ESNSLTIYKFDKKTKNW 297 (343)
T ss_dssp EEESSBEEEEETTSSTTCBSSCCCBC-----C---CEEEEECTTSSEEEEEET----------TTTEEEEEEECTTTCSE
T ss_pred EEeCCeEEEEEcCCCCcceeeccccccccccc---ceEEEECCCCCEEEEecC----------CCCcEEEEEEcccccce
Confidence 9996699999995 877665554 444321 135999999999999763 38999999986654322
Q ss_pred EecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcC---CCCEEEEEcCCCcEEEc
Q 011970 406 KINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE---ERNEIYTGNRHGLVHVW 472 (474)
Q Consensus 406 tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSp---Dg~~LaSgs~DgtVklW 472 (474)
.. . .+..+.|+| +++.|++++.|++++++
T Consensus 298 ~~----~----------------------------------~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 298 TK----D----------------------------------EESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EE----E----------------------------------EEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred Ee----c----------------------------------CceeEecCccccccceeEEEecCCceEEE
Confidence 22 1 677899999 99999999999999886
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=9.6e-34 Score=289.98 Aligned_cols=238 Identities=16% Similarity=0.163 Sum_probs=203.6
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecCC----------CeEEEEEc--CCcEEEEEEcCC-c-eEEEEecCCCC
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----------YTMLYSIS--DKHVQEIKISPG-I-MLLIFNRSSSH 249 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~t----------g~~l~tl~--~~~V~~vafSpg-~-~la~~s~~s~D 249 (474)
|...|..++|+|.++.+||+++.|++|+|||+.+ ++++.++. ...|.+++|+|. . .|+++ +.|
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~---~~d 203 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA---SDD 203 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE---CTT
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE---eCC
Confidence 4566779999943488999999999999999986 56666664 567999999984 3 56665 558
Q ss_pred ccEEEEecCCCeE-------EEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCC---ceEEeccccCCceEEE
Q 011970 250 VPLKILSIEDGTV-------LKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNA---ELMEVSRTEFMTPSAF 319 (474)
Q Consensus 250 ~tIkLWdi~tG~~-------L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg---~~~~~l~~h~~~v~sv 319 (474)
++|+|||+.++.. ...+.+|...+..|+|++.++..+++++.|++|+|||++++ +++..+..|...|.++
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 283 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCL 283 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEE
T ss_pred CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEE
Confidence 9999999988432 46777898999999998545667777899999999999987 5777788999999999
Q ss_pred EEcCCCc-EEEEEc-CCcEEEEeCC--CcEEEEeccCCCCcCCCCeeEEEECCCCC-EEEEEecCCCccccccCCCCeEE
Q 011970 320 IFLYENQ-LFLTFR-NRTVAVWNFR--GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSAGSIN 394 (474)
Q Consensus 320 ~Fspdg~-llaS~s-D~tIklWd~~--G~ll~tl~gH~~~~~~~~v~svafSpDg~-~LaS~s~~~~~~~~~~s~DgtIk 394 (474)
+|+|+++ +|++++ |++|+|||++ ++++.++.+|... |.+++|+|+|+ +||+++. |++|+
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~-----v~~i~~sp~~~~~l~s~~~-----------d~~i~ 347 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE-----IFQVQWSPHNETILASSGT-----------DRRLH 347 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSC-----EEEEEECSSCTTEEEEEET-----------TSCCE
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCC-----EEEEEECCCCCCEEEEEeC-----------CCcEE
Confidence 9999997 788998 9999999995 6789999999887 79999999995 7888876 99999
Q ss_pred EEeCCC--------------CeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCC-E
Q 011970 395 VSSILT--------------GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN-E 459 (474)
Q Consensus 395 lWdi~t--------------G~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~-~ 459 (474)
|||+.+ .+++..+.+|.. .|++++|+|+++ .
T Consensus 348 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~----------------------------------~v~~~~~~p~~~~~ 393 (430)
T 2xyi_A 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA----------------------------------KISDFSWNPNEPWI 393 (430)
T ss_dssp EEEGGGTTCCCCHHHHHHCCTTEEEECCCCSS----------------------------------CEEEEEECSSSTTE
T ss_pred EEeCCCCccccCccccccCCcceEEEcCCCCC----------------------------------CceEEEECCCCCCE
Confidence 999977 478888889885 899999999999 9
Q ss_pred EEEEcCCCcEEEccC
Q 011970 460 IYTGNRHGLVHVWSN 474 (474)
Q Consensus 460 LaSgs~DgtVklWd~ 474 (474)
|+|++.||+|+||+.
T Consensus 394 l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 394 ICSVSEDNIMQVWQM 408 (430)
T ss_dssp EEEEETTSEEEEEEE
T ss_pred EEEEECCCCEEEeEc
Confidence 999999999999973
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.6e-34 Score=291.77 Aligned_cols=238 Identities=8% Similarity=-0.006 Sum_probs=168.4
Q ss_pred eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceee-eccccCceEEEEeC-------CCCeEEE
Q 011970 131 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDD-------VNGKVLT 202 (474)
Q Consensus 131 ~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~-~~~~~~~~~V~Fs~-------~nGk~La 202 (474)
.+...++++++..|+++| .| ++++||++..+++.....+-. .+|..+|.+|+|+| .||++||
T Consensus 91 ~~~~~~~~~~~~~las~~----~d------~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~la 160 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVC----QD------NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIA 160 (393)
T ss_dssp ------CCEEEEEEEEEE----TT------SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEE
T ss_pred CcceeecCCCCCEEEEEe----CC------CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEE
Confidence 344556667788888866 66 799999999887633212111 13677899999983 2899999
Q ss_pred EecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCc--eEEEEecCCCCccEEEEecCCCeEEEEE------------
Q 011970 203 YSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGI--MLLIFNRSSSHVPLKILSIEDGTVLKVF------------ 266 (474)
Q Consensus 203 S~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~--~la~~s~~s~D~tIkLWdi~tG~~L~tl------------ 266 (474)
|+|.|+||||||+.++.++..+. ...|.+|+|+|++ +|+++ +.|++|+|||+++++...++
T Consensus 161 s~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~---~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~ 237 (393)
T 4gq1_A 161 SVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVG---ERNGNIRIFDWTLNLSAEENSQTELVKNPWLL 237 (393)
T ss_dssp EEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEE---ETTSEEEEEETTCCC----------CSCCCSE
T ss_pred EEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEec---CCCCEEEEEECCCCcccccccccCCcccceEE
Confidence 99999999999999888766553 5689999999843 45555 45899999999999876543
Q ss_pred -------------eecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcC----------
Q 011970 267 -------------YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLY---------- 323 (474)
Q Consensus 267 -------------~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp---------- 323 (474)
.+|...+..|.|.++++.++++++.|++++|||+.+++....+.+|...+..+.|+|
T Consensus 238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 317 (393)
T 4gq1_A 238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS 317 (393)
T ss_dssp EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC
T ss_pred ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc
Confidence 356677889999988999999999999999999999998887777777766665554
Q ss_pred ----------CCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCC
Q 011970 324 ----------ENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG 391 (474)
Q Consensus 324 ----------dg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dg 391 (474)
++.++++++ |++|+|||++ |+++..+.+|..+ |++|+|||||++||+++ ++
T Consensus 318 ~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~-----V~svafspdG~~LA~as------------~~ 380 (393)
T 4gq1_A 318 LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP-----IVDFCWHQDGSHLAIAT------------EG 380 (393)
T ss_dssp SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC-----EEEEEECTTSSEEEEEE------------SS
T ss_pred ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc-----EEEEEEcCCCCEEEEEe------------CC
Confidence 455778888 9999999995 9999999999876 79999999999999987 45
Q ss_pred eEEEEeC
Q 011970 392 SINVSSI 398 (474)
Q Consensus 392 tIklWdi 398 (474)
.|.||.+
T Consensus 381 Gv~lvrL 387 (393)
T 4gq1_A 381 SVLLTRL 387 (393)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 5777764
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=288.72 Aligned_cols=254 Identities=10% Similarity=0.084 Sum_probs=200.6
Q ss_pred eEEEEeCCCCeEEEEecCCCcEEEeecCCCe---EEEEEcC--C------------------------------------
Q 011970 189 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSISD--K------------------------------------ 227 (474)
Q Consensus 189 ~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~---~l~tl~~--~------------------------------------ 227 (474)
..|+|+ +||++|+++ .++.|++||+.+|+ ++.++.. .
T Consensus 8 ~~v~~s-~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (450)
T 2vdu_B 8 QNLLTS-RDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIK 85 (450)
T ss_dssp CEEEEC-SSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------------
T ss_pred EEEEec-CCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccc
Confidence 479998 799977766 57899999999999 7666542 1
Q ss_pred ------------------cEEEEEEcCCc-eEEEEecCCCCccEEEEecC--CCeEEEEEe--ecCcceeEEEEEecCCC
Q 011970 228 ------------------HVQEIKISPGI-MLLIFNRSSSHVPLKILSIE--DGTVLKVFY--HLLHRNKKVDFIEQFNE 284 (474)
Q Consensus 228 ------------------~V~~vafSpg~-~la~~s~~s~D~tIkLWdi~--tG~~L~tl~--~h~~~v~~V~F~~~~~~ 284 (474)
.|.+++|||++ .|++++ +.|++|+|||+. +|++++++. .|...+..++|+ |++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~ 162 (450)
T 2vdu_B 86 RTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACA--DSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA-EDDT 162 (450)
T ss_dssp --------------CCCCCEEEEEECTTSSEEEEEE--GGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC-TTSS
T ss_pred ccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEE--CCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc-CCCC
Confidence 59999999855 443332 458999999999 999999998 456788999997 6788
Q ss_pred eEEEEeCCCcEEEEECCCCceEE----eccccCCceEEEEEcCC---CcEEEEEc-CCcEEEEeCC-CcEEEE-eccCCC
Q 011970 285 KLLVKQENENLQILDVRNAELME----VSRTEFMTPSAFIFLYE---NQLFLTFR-NRTVAVWNFR-GELVTS-FEDHLL 354 (474)
Q Consensus 285 ~ll~~~~D~tIkIWDv~tg~~~~----~l~~h~~~v~sv~Fspd---g~llaS~s-D~tIklWd~~-G~ll~t-l~gH~~ 354 (474)
.|++++.|+.|++||+.+++... .+.+|...|.+++|+|+ +++|++++ |++|+|||+. ++++.+ +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 89999999999999999988654 78899999999999999 99999999 9999999995 998887 669988
Q ss_pred CcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccccccc
Q 011970 355 WHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKS 434 (474)
Q Consensus 355 ~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~ 434 (474)
+ |++++|+ ||++|++++. |++|+|||+.+|+++.++..|.. +. ..+.. .+ ...
T Consensus 243 ~-----v~~~~~s-d~~~l~s~~~-----------d~~v~vwd~~~~~~~~~~~~~~~-~~-~~~~~--~~------~~~ 295 (450)
T 2vdu_B 243 F-----VSSICCG-KDYLLLSAGG-----------DDKIFAWDWKTGKNLSTFDYNSL-IK-PYLND--QH------LAP 295 (450)
T ss_dssp C-----EEEEEEC-STTEEEEEES-----------SSEEEEEETTTCCEEEEEECHHH-HG-GGCCT--TS------BC-
T ss_pred c-----eEEEEEC-CCCEEEEEeC-----------CCeEEEEECCCCcEeeeecchhh-hh-hhhhh--cc------ccc
Confidence 7 7999999 9999999987 99999999999999999976531 00 00000 00 000
Q ss_pred ccccccc-cccccCEEEEEEcCCCCEEEEEc-CCCcEEEccC
Q 011970 435 SYIRSTV-GEALEDITSLFYDEERNEIYTGN-RHGLVHVWSN 474 (474)
Q Consensus 435 ~~~~~~~-~~~l~~V~slafSpDg~~LaSgs-~DgtVklWd~ 474 (474)
..+.... ...-..|.+++|+|||+.|++++ .|++|+||+.
T Consensus 296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ---------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred ccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 0000000 01123799999999999999999 9999999973
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-33 Score=310.45 Aligned_cols=237 Identities=14% Similarity=0.195 Sum_probs=202.7
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecC--CCeEEEEEc--CCcEEEEEEcC---CceEEEEecCCCCccEEEEe
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLKILS 256 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~--tg~~l~tl~--~~~V~~vafSp---g~~la~~s~~s~D~tIkLWd 256 (474)
|...|.+++|+ |||++|++|+.|++|+|||+. +++++.++. ...|.+++|+| +..|+++ +.|++|++||
T Consensus 8 H~~~V~~l~~s-~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~---s~Dg~I~vwd 83 (753)
T 3jro_A 8 HNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVLIWK 83 (753)
T ss_dssp CCCCEEEECCC-SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEE---ETTSCEEEEE
T ss_pred CcceeEEEEEC-CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEE---eCCCeEEEEE
Confidence 55678899998 799999999999999999998 556777776 45899999995 5667766 4589999999
Q ss_pred cCCCe--EEEEEeecCcceeEEEEEecC-CCeEEEEeCCCcEEEEECCCCc--eEEeccccCCceEEEEEcC--------
Q 011970 257 IEDGT--VLKVFYHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNAE--LMEVSRTEFMTPSAFIFLY-------- 323 (474)
Q Consensus 257 i~tG~--~L~tl~~h~~~v~~V~F~~~~-~~~ll~~~~D~tIkIWDv~tg~--~~~~l~~h~~~v~sv~Fsp-------- 323 (474)
+.+|+ ++..+.+|...+.+++|++.. +..+++++.|++|++||++++. ....+.+|...|.+++|+|
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 99998 788888999999999998432 7788889999999999999884 3455678999999999999
Q ss_pred -----CCcEEEEEc-CCcEEEEeCC-C----cEEEEeccCCCCcCCCCeeEEEECCC---CCEEEEEecCCCccccccCC
Q 011970 324 -----ENQLFLTFR-NRTVAVWNFR-G----ELVTSFEDHLLWHPDCNTNNIYITSD---QDLIISYCKAEPEDQWMEGS 389 (474)
Q Consensus 324 -----dg~llaS~s-D~tIklWd~~-G----~ll~tl~gH~~~~~~~~v~svafSpD---g~~LaS~s~~~~~~~~~~s~ 389 (474)
++++|++++ |++|++||++ + +++.++.+|... |.+++|+|+ |++|++++.
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~-----V~~l~~sp~~~~~~~l~s~s~----------- 227 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPTVLLRSYLASVSQ----------- 227 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCCCSSSEEEEEEES-----------
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc-----EEEEEeccCCCCCCEEEEEec-----------
Confidence 699999999 9999999994 5 678899999987 799999999 999999987
Q ss_pred CCeEEEEeCCCCe-----EEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEc
Q 011970 390 AGSINVSSILTGK-----CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN 464 (474)
Q Consensus 390 DgtIklWdi~tG~-----cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs 464 (474)
||+|+|||+.+++ .+....+|.. .|++++|+|||+.|++|+
T Consensus 228 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~----------------------------------~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPD----------------------------------VLWRASWSLSGNVLALSG 273 (753)
T ss_dssp SSCEEEEEESSSSSCCBCCBSSSSCCSS----------------------------------CCCCEEECTTTCCEEEEC
T ss_pred CCEEEEecCCCCCCcceeEEeccCCCCC----------------------------------ceEEEEEcCCCCEEEEEc
Confidence 9999999998874 2222233432 799999999999999999
Q ss_pred CCCcEEEccC
Q 011970 465 RHGLVHVWSN 474 (474)
Q Consensus 465 ~DgtVklWd~ 474 (474)
.||+|++|+.
T Consensus 274 ~Dg~I~vwd~ 283 (753)
T 3jro_A 274 GDNKVTLWKE 283 (753)
T ss_dssp SSSCEECCBC
T ss_pred CCCEEEEEec
Confidence 9999999984
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.5e-31 Score=269.00 Aligned_cols=274 Identities=9% Similarity=0.078 Sum_probs=221.4
Q ss_pred EEEEEee--ccEEEEeeCCCeEEeeeccccceeeE-----eecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEE
Q 011970 91 VIEIVAA--RDIVFALAHSGVCAAFSRETNRRICF-----LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 163 (474)
Q Consensus 91 V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~-----l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~ 163 (474)
+..+.++ +.++++++.|+++++||..+|+.+.. +.+ |...|++++|+|+|+.+++++ .| .++
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~s~~----~d------~~v 193 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKK-KLGFVETISIPEHNELWVSQM----QA------NAV 193 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHT-TCCEEEEEEEGGGTEEEEEEG----GG------TEE
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccc-cCCceeEEEEcCCCEEEEEEC----CC------CEE
Confidence 4455555 77888899999999999999999883 444 778899999999999888854 44 689
Q ss_pred EEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEE-EEecCCCcEEEeecCCCeEEEEEcC-CcEEEEEEcCCc-eE
Q 011970 164 KIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGI-ML 240 (474)
Q Consensus 164 ~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~L-aS~s~D~tiKlWdl~tg~~l~tl~~-~~V~~vafSpg~-~l 240 (474)
++|++.++++... +. .+...+..++|+ |+|+.| ++++.|++|++||+.+++++.++.. ..+..++|+|++ .+
T Consensus 194 ~~~d~~~~~~~~~---~~-~~~~~~~~~~~~-~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l 268 (433)
T 3bws_A 194 HVFDLKTLAYKAT---VD-LTGKWSKILLYD-PIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKEL 268 (433)
T ss_dssp EEEETTTCCEEEE---EE-CSSSSEEEEEEE-TTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEE
T ss_pred EEEECCCceEEEE---Ec-CCCCCeeEEEEc-CCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEE
Confidence 9999998886432 22 234567789998 688877 6666899999999999999988874 569999999854 66
Q ss_pred EEEecCC-----CCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEeccccCC
Q 011970 241 LIFNRSS-----SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFM 314 (474)
Q Consensus 241 a~~s~~s-----~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~ 314 (474)
++++... .|+.|++||+.+|+++..+.+ ...+..++|+ |++..++++ +.|++|++||+.+++++..+. +..
T Consensus 269 ~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~~-~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~ 345 (433)
T 3bws_A 269 YIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-PGNKRHIVSG-NTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFD 345 (433)
T ss_dssp EEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-EECEEEEEEC-SSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSS
T ss_pred EEEECCCCccccCCCeEEEEECCCCcEEeeccC-CCCcceEEEC-CCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCC
Confidence 6664322 478999999999999888753 3577889997 567677665 799999999999999988765 567
Q ss_pred ceEEEEEcCCCcEEEEEc-C---------------CcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEe
Q 011970 315 TPSAFIFLYENQLFLTFR-N---------------RTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 377 (474)
Q Consensus 315 ~v~sv~Fspdg~llaS~s-D---------------~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s 377 (474)
.+.+++|+|||+++++++ + |+|.+||. +|+++..+.++.. +..++|+|||++|++++
T Consensus 346 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 346 KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQ------PTGLDVSPDNRYLVISD 419 (433)
T ss_dssp SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSS------EEEEEECTTSCEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCC------CceEEEcCCCCEEEEEE
Confidence 899999999999887775 3 59999999 4999999987543 68999999999999875
Q ss_pred cCCCccccccCCCCeEEEEeCC
Q 011970 378 KAEPEDQWMEGSAGSINVSSIL 399 (474)
Q Consensus 378 ~~~~~~~~~~s~DgtIklWdi~ 399 (474)
. .|++|++|++.
T Consensus 420 ~----------~d~~i~v~~~~ 431 (433)
T 3bws_A 420 F----------LDHQIRVYRRD 431 (433)
T ss_dssp T----------TTTEEEEEEET
T ss_pred C----------CCCeEEEEEec
Confidence 3 39999999974
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.3e-32 Score=280.13 Aligned_cols=237 Identities=10% Similarity=0.073 Sum_probs=181.0
Q ss_pred ceeecccCCCCCcccccccc----------cccccEEEEEee------ccEEEEeeCCCeEEeeeccccceeeEeecCCC
Q 011970 66 VEEYDTHDPKGHCPFVLPFL----------MKRTKVIEIVAA------RDIVFALAHSGVCAAFSRETNRRICFLNVSPD 129 (474)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~----------~~~~~V~~i~~s------~~~las~s~dgtiklW~~~tg~~l~~l~g~~~ 129 (474)
......|..|+...++.|+- -+...|+.|+++ ++++++++++ +++|++.+|+.+++.-.+|+
T Consensus 79 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d 156 (356)
T 2w18_A 79 LYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSD 156 (356)
T ss_dssp EEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTT
T ss_pred eEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCC
Confidence 35556677777666666620 255679999999 4688988855 88899999999999433488
Q ss_pred ceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCC--CCeEEEEecCC
Q 011970 130 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV--NGKVLTYSAQD 207 (474)
Q Consensus 130 ~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~--nGk~LaS~s~D 207 (474)
..|+.++|+|||+.+++- .++.. .+..++|++. ||.+|||+|.|
T Consensus 157 ~~V~~~~~s~dG~~~~s~------------------------------~~~~~----~v~~l~fs~~~g~~~~LaSgS~D 202 (356)
T 2w18_A 157 QQVEVMTFAEDGGGKENQ------------------------------FLMPP----EETILTFAEVQGMQEALLGTTIM 202 (356)
T ss_dssp CEEEEEEECTTSCEEEEE------------------------------EECCC----SSCEEEEEEEETSTTEEEEEETT
T ss_pred CcEEEEEECCCCceeeee------------------------------ccCCC----ceeeEEeeccCCCCceEEEecCC
Confidence 999999999999977641 12222 2336777732 77999999999
Q ss_pred CcEEEeecCCCeEEEEEcC-----CcEEEEEEcCCceEE-EE---------ecCCCCccEEEEecCCCeEEEEEe-----
Q 011970 208 SIYKVFDLKNYTMLYSISD-----KHVQEIKISPGIMLL-IF---------NRSSSHVPLKILSIEDGTVLKVFY----- 267 (474)
Q Consensus 208 ~tiKlWdl~tg~~l~tl~~-----~~V~~vafSpg~~la-~~---------s~~s~D~tIkLWdi~tG~~L~tl~----- 267 (474)
+||||||+++|++++++++ ..|..++|||++.++ ++ .+++.|++||+||..+|+++.++.
T Consensus 203 ~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~ 282 (356)
T 2w18_A 203 NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPP 282 (356)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCT
T ss_pred CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccC
Confidence 9999999999999999974 246778999865544 32 235779999999999999998873
Q ss_pred ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceE-EEEEcCCCcEEEEEc-CCcEEEEeC
Q 011970 268 HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPS-AFIFLYENQLFLTFR-NRTVAVWNF 341 (474)
Q Consensus 268 ~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~-sv~Fspdg~llaS~s-D~tIklWd~ 341 (474)
+|.....+.++. +..+++++.|+||||||+++|++++++.+|...+. .++|||||++|+|++ |+||||||+
T Consensus 283 Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 283 GQAGRFLEGDVK---DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TCCCCEEEEEEE---TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcceeEccccC---CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 555554444543 56677788999999999999999999999988766 589999999999999 999999995
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=3.7e-31 Score=271.96 Aligned_cols=293 Identities=11% Similarity=0.093 Sum_probs=227.0
Q ss_pred cEEEEee----CCC----eEEeeec--ccccee--eEeecCCCceEEEEEEee--------------CCCEEEEEEeecC
Q 011970 99 DIVFALA----HSG----VCAAFSR--ETNRRI--CFLNVSPDEVIRSLFYNK--------------NNDSLITVSVYAS 152 (474)
Q Consensus 99 ~~las~s----~dg----tiklW~~--~tg~~l--~~l~g~~~~~i~sv~fsp--------------dg~~Lis~S~~~s 152 (474)
+.+++|+ .|| +++|||+ .+|+++ .++.+ |...++.+++++ ++..|+.++.+..
T Consensus 76 ~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~ 154 (415)
T 2hqs_A 76 DAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKV-NKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNG 154 (415)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEE-CGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSS
T ss_pred CEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEc-ChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCC
Confidence 5566665 567 9999999 999998 55887 667789998886 3778888876533
Q ss_pred CCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCC---cEEEeecCCCeEEEEE-cCCc
Q 011970 153 DNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS---IYKVFDLKNYTMLYSI-SDKH 228 (474)
Q Consensus 153 ~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~---tiKlWdl~tg~~l~tl-~~~~ 228 (474)
++ ...++++||+..++. . .+..+ ...+.+++|| |||+.||+++.|+ +|++||+++|++.... +...
T Consensus 155 ~~----~~~~i~i~d~~g~~~-~--~l~~~--~~~v~~~~~S-pdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~ 224 (415)
T 2hqs_A 155 GQ----FPYELRVSDYDGYNQ-F--VVHRS--PQPLMSPAWS-PDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH 224 (415)
T ss_dssp SS----CCEEEEEEETTSCSC-E--EEEEE--SSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSC
T ss_pred CC----ccceEEEEcCCCCCC-E--EEeCC--CCcceeeEEc-CCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCc
Confidence 31 015899999764332 2 23333 4567789998 7999999999885 9999999999976433 2467
Q ss_pred EEEEEEcCCc-eEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeC-CC--cEEEEECCCCc
Q 011970 229 VQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQE-NE--NLQILDVRNAE 304 (474)
Q Consensus 229 V~~vafSpg~-~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~-D~--tIkIWDv~tg~ 304 (474)
+.+++|||++ .||.......+..|++||+++|++ ..+..|...+..++|+ |++.+|++++. ++ .|.+||+.+++
T Consensus 225 ~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s-pdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWF-PDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEEC-CCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 9999999855 466443333345699999999887 5677777889999997 67888888775 55 67777999988
Q ss_pred eEEeccccCCceEEEEEcCCCcEEEEEc-C---CcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecC
Q 011970 305 LMEVSRTEFMTPSAFIFLYENQLFLTFR-N---RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 379 (474)
Q Consensus 305 ~~~~l~~h~~~v~sv~Fspdg~llaS~s-D---~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~ 379 (474)
+.. +..|...+.+++|+|||++|++++ + .+|.+||++ |++ ..+..|. . +.+++|+|||++|++++.
T Consensus 303 ~~~-l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~-----~~~~~~spdg~~l~~~s~- 373 (415)
T 2hqs_A 303 PQR-ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-L-----DETPSLAPNGTMVIYSSS- 373 (415)
T ss_dssp CEE-CCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-S-----CEEEEECTTSSEEEEEEE-
T ss_pred EEE-EecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-C-----cCCeEEcCCCCEEEEEEc-
Confidence 654 455667889999999999999887 4 489999996 666 5677764 3 689999999999999876
Q ss_pred CCccccccCCCC---eEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCC
Q 011970 380 EPEDQWMEGSAG---SINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEE 456 (474)
Q Consensus 380 ~~~~~~~~s~Dg---tIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpD 456 (474)
|+ .|.+||+ +|+++..|.+|.. .|++++|||.
T Consensus 374 ----------~~~~~~l~~~d~-~g~~~~~l~~~~~----------------------------------~v~~~~~~~~ 408 (415)
T 2hqs_A 374 ----------QGMGSVLNLVST-DGRFKARLPATDG----------------------------------QVKFPAWSPY 408 (415)
T ss_dssp ----------ETTEEEEEEEET-TSCCEEECCCSSS----------------------------------EEEEEEECCC
T ss_pred ----------CCCccEEEEEEC-CCCcEEEeeCCCC----------------------------------CCcCCccccc
Confidence 44 8999997 5888999999985 8999999997
Q ss_pred CC
Q 011970 457 RN 458 (474)
Q Consensus 457 g~ 458 (474)
-+
T Consensus 409 ~~ 410 (415)
T 2hqs_A 409 LH 410 (415)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.6e-31 Score=287.35 Aligned_cols=315 Identities=8% Similarity=0.058 Sum_probs=238.5
Q ss_pred cccEEEEEee--ccEEEEeeC-CC-----eEEeeeccccceeeEeecCCC-----------------------ceEEEEE
Q 011970 88 RTKVIEIVAA--RDIVFALAH-SG-----VCAAFSRETNRRICFLNVSPD-----------------------EVIRSLF 136 (474)
Q Consensus 88 ~~~V~~i~~s--~~~las~s~-dg-----tiklW~~~tg~~l~~l~g~~~-----------------------~~i~sv~ 136 (474)
...|.++.|+ |+.||+++. |+ +|++||+.+|+....+.+... ..|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 3456777777 999999998 88 999999999998877765211 2388999
Q ss_pred EeeCCCEEEEEEeecCCCccceeeeEEEEeEeccC---CCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEe
Q 011970 137 YNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG---KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVF 213 (474)
Q Consensus 137 fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G---~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlW 213 (474)
|||||+.|++++. .++.+|++..| ++. .+..+ ...+..++|| |||+.||+++ +++|++|
T Consensus 116 ~SpDg~~l~~~~~-----------~~i~~~d~~~~~~~~~~---~l~~~--~~~~~~~~~S-PDG~~la~~~-~~~i~~~ 177 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-----------GELYLYDLKQEGKAAVR---QLTHG--EGFATDAKLS-PKGGFVSFIR-GRNLWVI 177 (741)
T ss_dssp ECTTSSEEEEEET-----------TEEEEEESSSCSTTSCC---BCCCS--SSCEEEEEEC-TTSSEEEEEE-TTEEEEE
T ss_pred ECCCCCEEEEEeC-----------CcEEEEECCCCCcceEE---EcccC--CcccccccCC-CCCCEEEEEe-CCcEEEE
Confidence 9999999998762 48999999888 542 23322 3456689998 7999999988 5699999
Q ss_pred ecCCCeEEEEEcC--Cc----------------EEEEEEcCC-ceEEEEecCC---------------------------
Q 011970 214 DLKNYTMLYSISD--KH----------------VQEIKISPG-IMLLIFNRSS--------------------------- 247 (474)
Q Consensus 214 dl~tg~~l~tl~~--~~----------------V~~vafSpg-~~la~~s~~s--------------------------- 247 (474)
|+.++++...... .. +.+++|||+ ..|++.+.+.
T Consensus 178 d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g 257 (741)
T 2ecf_A 178 DLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAG 257 (741)
T ss_dssp ETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTT
T ss_pred ecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCC
Confidence 9999987654432 11 478999985 5566654321
Q ss_pred ---CCccEEEEecCC-CeEEEEEe--ecCcceeEEEEEecCCCeEEEEe-----CCCcEEEEECCCCceEEeccccCC--
Q 011970 248 ---SHVPLKILSIED-GTVLKVFY--HLLHRNKKVDFIEQFNEKLLVKQ-----ENENLQILDVRNAELMEVSRTEFM-- 314 (474)
Q Consensus 248 ---~D~tIkLWdi~t-G~~L~tl~--~h~~~v~~V~F~~~~~~~ll~~~-----~D~tIkIWDv~tg~~~~~l~~h~~-- 314 (474)
....|.+||+.+ |++..... .|...+..++| |++..|++.+ .+.+|.+||+.++++..++..|..
T Consensus 258 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 258 DANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW--RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp SCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE--EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred CCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe--CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 112789999999 98766543 36678899999 6788888754 367899999999999888776653
Q ss_pred --ceEEEEEcCCCcEEEEEc-CCcEEEEeC--CCcEEEEeccCCCCcCCCCeeEE-EECCCCCEEEEEecCCCccccccC
Q 011970 315 --TPSAFIFLYENQLFLTFR-NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNNI-YITSDQDLIISYCKAEPEDQWMEG 388 (474)
Q Consensus 315 --~v~sv~Fspdg~llaS~s-D~tIklWd~--~G~ll~tl~gH~~~~~~~~v~sv-afSpDg~~LaS~s~~~~~~~~~~s 388 (474)
.+..++|+|||+++++++ |++++||.+ +|+ +..+.+|... |.++ +|||||+.|+..+.
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~-----v~~~~~~s~dg~~l~~~~~---------- 399 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWS-----VDELLAVDEKAGLAYFRAG---------- 399 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSC-----EEEEEEEETTTTEEEEEEC----------
T ss_pred CCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceE-----EEeEeEEeCCCCEEEEEEe----------
Confidence 346889999999999888 998888876 477 8899888654 5676 59999998865432
Q ss_pred CCC--eEEEEeCCC-CeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcC
Q 011970 389 SAG--SINVSSILT-GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR 465 (474)
Q Consensus 389 ~Dg--tIklWdi~t-G~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~ 465 (474)
.|+ +++||++.. |+++..|.+ .. .+.+++|||||+.|+....
T Consensus 400 ~~~~~~~~l~~~~~~g~~~~~l~~-~~----------------------------------~~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 400 IESARESQIYAVPLQGGQPQRLSK-AP----------------------------------GMHSASFARNASVYVDSWS 444 (741)
T ss_dssp SSCTTCBEEEEEETTCCCCEECCC-SC----------------------------------SEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEEEEEEEcCCCCeeeccc-CC----------------------------------CceEEEECCCCCEEEEEec
Confidence 244 899999864 777888876 32 6889999999999886643
Q ss_pred C----CcEEEcc
Q 011970 466 H----GLVHVWS 473 (474)
Q Consensus 466 D----gtVklWd 473 (474)
+ ..+.+|+
T Consensus 445 ~~~~p~~~~l~~ 456 (741)
T 2ecf_A 445 NNSTPPQIELFR 456 (741)
T ss_dssp ETTEEEEEEEEE
T ss_pred CCCCCCeEEEEE
Confidence 3 3466664
No 128
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=5.1e-31 Score=269.79 Aligned_cols=243 Identities=12% Similarity=0.105 Sum_probs=196.1
Q ss_pred CCCceEEEEEEeeC-CCEEEEEEeecCCCccceeeeEEEEeEecc--------CCCCCccceeeeccccCceEEEEeCCC
Q 011970 127 SPDEVIRSLFYNKN-NDSLITVSVYASDNFSSLKCRSTKIEYIRR--------GKPDSGFALFESESLKWPGFVEFDDVN 197 (474)
Q Consensus 127 ~~~~~i~sv~fspd-g~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~--------G~~~~~~~lf~~~~~~~~~~V~Fs~~n 197 (474)
.|...|.+++|+|+ +..||+++ .+ ..++||++.. ++...-..+. .|...+.+++|+ |+
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~----~d------g~V~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~-~~ 192 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKT----PS------SDVLVFDYTKHPSKPEPSGECQPDLRLR--GHQKEGYGLSWN-PN 192 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEEC----SS------SCEEEEEGGGSCSSCCTTCCCCCSEEEE--CCSSCCCCEEEC-TT
T ss_pred cCCCcEEEEEECCCCCcEEEEEC----CC------CcEEEEECCCcccccCccccCCCcEEec--CCCCCeEEEEeC-CC
Confidence 47788999999998 66777754 45 6899999976 2221111122 244556789998 68
Q ss_pred Ce-EEEEecCCCcEEEeecCCCeE-------EEEE--cCCcEEEEEEcC-Cc-eEEEEecCCCCccEEEEecCCC---eE
Q 011970 198 GK-VLTYSAQDSIYKVFDLKNYTM-------LYSI--SDKHVQEIKISP-GI-MLLIFNRSSSHVPLKILSIEDG---TV 262 (474)
Q Consensus 198 Gk-~LaS~s~D~tiKlWdl~tg~~-------l~tl--~~~~V~~vafSp-g~-~la~~s~~s~D~tIkLWdi~tG---~~ 262 (474)
|+ +|++|+.|++|+|||+.++.. ...+ +...|.+|+|+| +. +++++ +.|+.|++||++++ ++
T Consensus 193 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~---~~dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 193 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV---ADDQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp STTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE---ETTSEEEEEETTCSCSSSC
T ss_pred CCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE---eCCCeEEEEECCCCCCCcc
Confidence 88 999999999999999987432 2334 346799999998 44 55554 45899999999988 68
Q ss_pred EEEEeecCcceeEEEEEecCCC-eEEEEeCCCcEEEEECCC-CceEEeccccCCceEEEEEcCCCc-EEEEEc-CCcEEE
Q 011970 263 LKVFYHLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRN-AELMEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAV 338 (474)
Q Consensus 263 L~tl~~h~~~v~~V~F~~~~~~-~ll~~~~D~tIkIWDv~t-g~~~~~l~~h~~~v~sv~Fspdg~-llaS~s-D~tIkl 338 (474)
+.++..|...+..++|+ |++. .+++++.|++|+|||+++ ++++..+.+|...|.+++|+|+++ +|++++ |++|+|
T Consensus 270 ~~~~~~~~~~v~~i~~~-p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~i 348 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 348 (430)
T ss_dssp SEEEECCSSCEEEEEEC-SSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEE
T ss_pred eeEeecCCCCeEEEEeC-CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEE
Confidence 88898899999999998 4555 566789999999999998 667888899999999999999995 788888 999999
Q ss_pred EeCCC---------------cEEEEeccCCCCcCCCCeeEEEECCCCC-EEEEEecCCCccccccCCCCeEEEEeCCCCe
Q 011970 339 WNFRG---------------ELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSAGSINVSSILTGK 402 (474)
Q Consensus 339 Wd~~G---------------~ll~tl~gH~~~~~~~~v~svafSpDg~-~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~ 402 (474)
||+.. +++..+.+|... |+.++|+|+++ +|+|++. ||+|+||++.++.
T Consensus 349 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~p~~~~~l~s~s~-----------dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK-----ISDFSWNPNEPWIICSVSE-----------DNIMQVWQMAENV 412 (430)
T ss_dssp EEGGGTTCCCCHHHHHHCCTTEEEECCCCSSC-----EEEEEECSSSTTEEEEEET-----------TSEEEEEEECHHH
T ss_pred EeCCCCccccCccccccCCcceEEEcCCCCCC-----ceEEEECCCCCCEEEEEEC-----------CCCEEEeEccccc
Confidence 99952 789999999887 79999999999 9999886 9999999986543
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=5.5e-30 Score=274.30 Aligned_cols=295 Identities=7% Similarity=-0.007 Sum_probs=232.7
Q ss_pred EEEEEee--ccEEEEeeCCCeEEeeec--cccceeeEeecCCCceEEEEEEee----CCCEEEEEEeecCCCccceeeeE
Q 011970 91 VIEIVAA--RDIVFALAHSGVCAAFSR--ETNRRICFLNVSPDEVIRSLFYNK----NNDSLITVSVYASDNFSSLKCRS 162 (474)
Q Consensus 91 V~~i~~s--~~~las~s~dgtiklW~~--~tg~~l~~l~g~~~~~i~sv~fsp----dg~~Lis~S~~~s~d~s~Lk~~~ 162 (474)
+..++|+ |++|++++.|++|++||+ .|++++.++.. . ...++|+||| ||+.|++++.. + .+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g-~~p~~va~sp~~~~dg~~l~v~~~~---~------~~ 249 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G-IEARSVESSKFKGYEDRYTIAGAYW---P------PQ 249 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C-SEEEEEEECCSTTCTTTEEEEEEEE---S------SE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C-CCcceEEeCCCcCCCCCEEEEEEcc---C------Ce
Confidence 6777787 999999999999999999 89999999984 3 4589999999 99999987632 3 58
Q ss_pred EEEeEeccCCCCCccceeeec------c-ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEE--EEc-CCcEEEE
Q 011970 163 TKIEYIRRGKPDSGFALFESE------S-LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--SIS-DKHVQEI 232 (474)
Q Consensus 163 ~~iw~i~~G~~~~~~~lf~~~------~-~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~--tl~-~~~V~~v 232 (474)
+.|||..++++.+.+++.... + -.++..+.|++.++.++++...|++|.+||+.+++++. ++. +..+.++
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~ 329 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDG 329 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCc
Confidence 999999999886544332110 1 12566899995456778899999999999999877544 444 4678899
Q ss_pred EEcCCce-EEEEecCCCCccEEEEecCCCeEEEEEee----cCcceeEEEEEecCCCeEEEEe--CCCcEEEEECCC---
Q 011970 233 KISPGIM-LLIFNRSSSHVPLKILSIEDGTVLKVFYH----LLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRN--- 302 (474)
Q Consensus 233 afSpg~~-la~~s~~s~D~tIkLWdi~tG~~L~tl~~----h~~~v~~V~F~~~~~~~ll~~~--~D~tIkIWDv~t--- 302 (474)
+|+|++. +++++ ..+.+|++||+++|++++++.. |..+ .+.|..|+++.+++++ .|++|.|||+.+
T Consensus 330 ~~spdg~~l~va~--~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~--g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 330 GWDSSHRYFMTAA--NNSNKVAVIDSKDRRLSALVDVGKTPHPGR--GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp EECTTSCEEEEEE--GGGTEEEEEETTTTEEEEEEECSSSBCCTT--CEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred eECCCCCEEEEEe--cCCCeEEEEECCCCeEEEeeccCCCCCCCC--CcccCCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 9998554 55553 3468999999999999999984 4333 3344446656666653 689999999999
Q ss_pred ----CceEEeccccCCceEEEEEcCCCcEEEEEc--------CCcEEEEeCC-CcEE-EEe--------ccCCCCcCCCC
Q 011970 303 ----AELMEVSRTEFMTPSAFIFLYENQLFLTFR--------NRTVAVWNFR-GELV-TSF--------EDHLLWHPDCN 360 (474)
Q Consensus 303 ----g~~~~~l~~h~~~v~sv~Fspdg~llaS~s--------D~tIklWd~~-G~ll-~tl--------~gH~~~~~~~~ 360 (474)
+++++++.+|...+..++|+|||+.|.+++ +++|+|||++ ++++ +.| ..|..+
T Consensus 406 ~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~----- 480 (543)
T 1nir_A 406 PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKR----- 480 (543)
T ss_dssp TTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCE-----
T ss_pred chhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCc-----
Confidence 899999999998999999999999999986 6799999995 8877 554 344444
Q ss_pred eeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCC
Q 011970 361 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 411 (474)
Q Consensus 361 v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~ 411 (474)
+..++|+|||+.|..+..+. .+.|++|.|||..|++|+++|+++.
T Consensus 481 ~~~~~~~~~g~~~~~s~~~~------~~~~~~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 481 VVQPEYNKRGDEVWFSVWNG------KNDSSALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp EEEEEECSSSSEEEEEEECC------TTSCCEEEEEETTTTEEEEEECCTT
T ss_pred eEeccCCCCCCEEEEEeecC------CCCCCeEEEEECCCceEEEeecCCC
Confidence 78999999999999764311 1248999999999999999998764
No 130
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.7e-31 Score=294.48 Aligned_cols=247 Identities=11% Similarity=0.065 Sum_probs=199.0
Q ss_pred eEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccC--CCCCccceeeeccccCceEEEEeCCC--
Q 011970 122 CFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG--KPDSGFALFESESLKWPGFVEFDDVN-- 197 (474)
Q Consensus 122 ~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G--~~~~~~~lf~~~~~~~~~~V~Fs~~n-- 197 (474)
.++.| |.+.|.+++|+|+|+.|++++ .| ++++||++..+ ++.. .+. +|...|.+|+|+ |+
T Consensus 3 ~~l~g-H~~~V~~l~~s~dg~~latg~----~d------g~I~vwd~~~~~~~~~~---~l~-~h~~~V~~l~~s-~~~~ 66 (753)
T 3jro_A 3 VIANA-HNELIHDAVLDYYGKRLATCS----SD------KTIKIFEVEGETHKLID---TLT-GHEGPVWRVDWA-HPKF 66 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEE----TT------TEEEEEEEETTEEEEEE---EEC-CCSSCEEEEEEC-CTTS
T ss_pred eeccc-CcceeEEEEECCCCCeEEEEE----CC------CcEEEEecCCCCCccce---ecc-CCcCceEEEEec-CCCC
Confidence 45676 889999999999999999976 45 69999998743 3311 122 245667899998 55
Q ss_pred CeEEEEecCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcCC---ceEEEEecCCCCccEEEEecCCCe--EEEEEee
Q 011970 198 GKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISPG---IMLLIFNRSSSHVPLKILSIEDGT--VLKVFYH 268 (474)
Q Consensus 198 Gk~LaS~s~D~tiKlWdl~tg~--~l~tl~--~~~V~~vafSpg---~~la~~s~~s~D~tIkLWdi~tG~--~L~tl~~ 268 (474)
|++|++|+.|++|+|||+.+++ ++..+. ...|.+++|+|+ ..++++ +.|++|++||+.++. ....+.+
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sg---s~dg~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA---SSDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE---ETTSEEEEEECCSSSCCCCEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEE---eCCCcEEEEEeecCCCcceeEeec
Confidence 9999999999999999999997 566664 568999999984 566665 458999999999883 4456778
Q ss_pred cCcceeEEEEEec------------CCCeEEEEeCCCcEEEEECCCC----ceEEeccccCCceEEEEEcCC---CcEEE
Q 011970 269 LLHRNKKVDFIEQ------------FNEKLLVKQENENLQILDVRNA----ELMEVSRTEFMTPSAFIFLYE---NQLFL 329 (474)
Q Consensus 269 h~~~v~~V~F~~~------------~~~~ll~~~~D~tIkIWDv~tg----~~~~~l~~h~~~v~sv~Fspd---g~lla 329 (474)
|...+.+++|++. ++..+++++.|++|+|||++++ .++..+.+|...|.+++|+|+ +++|+
T Consensus 144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~ 223 (753)
T 3jro_A 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLA 223 (753)
T ss_dssp CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEE
Confidence 8899999999863 5788999999999999999987 566788999999999999999 99999
Q ss_pred EEc-CCcEEEEeCC-Cc-----EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe
Q 011970 330 TFR-NRTVAVWNFR-GE-----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 402 (474)
Q Consensus 330 S~s-D~tIklWd~~-G~-----ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~ 402 (474)
+++ |++|++||+. ++ .+....+|... |.+++|+|||++|++++. ||+|++||+.++.
T Consensus 224 s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-----v~~l~~spdg~~l~s~s~-----------Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 224 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSLSGNVLALSGG-----------DNKVTLWKENLEG 287 (753)
T ss_dssp EEESSSCEEEEEESSSSSCCBCCBSSSSCCSSC-----CCCEEECTTTCCEEEECS-----------SSCEECCBCCSSS
T ss_pred EEecCCEEEEecCCCCCCcceeEEeccCCCCCc-----eEEEEEcCCCCEEEEEcC-----------CCEEEEEecCCCC
Confidence 999 9999999995 53 33344456665 689999999999999876 9999999998654
Q ss_pred E
Q 011970 403 C 403 (474)
Q Consensus 403 c 403 (474)
.
T Consensus 288 ~ 288 (753)
T 3jro_A 288 K 288 (753)
T ss_dssp C
T ss_pred C
Confidence 3
No 131
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=3.8e-30 Score=276.98 Aligned_cols=309 Identities=10% Similarity=0.013 Sum_probs=217.4
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCc---eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCC
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDE---VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD 174 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~---~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~ 174 (474)
|+++++ +.||++++||..+|++...+.+ |.. .|.+++|||||+.|++++.+.... ..=...++.|||+.+|++
T Consensus 28 g~~~~~-~~dg~i~~~d~~~g~~~~~~~~-~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~-~~~~~~~i~~~d~~~~~~- 103 (723)
T 1xfd_A 28 TEFIYR-EQKGTVRLWNVETNTSTVLIEG-KKIESLRAIRYEISPDREYALFSYNVEPIY-QHSYTGYYVLSKIPHGDP- 103 (723)
T ss_dssp SCBCCC-CSSSCEEEBCGGGCCCEEEECT-TTTTTTTCSEEEECTTSSEEEEEESCCCCS-SSCCCSEEEEEESSSCCC-
T ss_pred CcEEEE-eCCCCEEEEECCCCcEEEEecc-ccccccccceEEECCCCCEEEEEecCccce-eecceeeEEEEECCCCce-
Confidence 887766 7899999999999999888876 433 489999999999999987432210 000015788999999886
Q ss_pred Cccceeee-ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC--CcE------------------EEEE
Q 011970 175 SGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHV------------------QEIK 233 (474)
Q Consensus 175 ~~~~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~--~~V------------------~~va 233 (474)
. .+-.. .+...+..++|| |||+.||+++. ++|++||+.+|++...... ..+ .+++
T Consensus 104 ~--~l~~~~~~~~~~~~~~~S-PdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~ 179 (723)
T 1xfd_A 104 Q--SLDPPEVSNAKLQYAGWG-PKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHW 179 (723)
T ss_dssp E--ECCCTTCCSCCCSBCCBC-SSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEE
T ss_pred E--eccCCccccccccccEEC-CCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEE
Confidence 1 12211 122235679998 79999999986 7999999999987665542 222 7899
Q ss_pred EcCC-ceEEEEecCC-------------------------------CCccEEEEecCCCeEEEEEeec------CcceeE
Q 011970 234 ISPG-IMLLIFNRSS-------------------------------SHVPLKILSIEDGTVLKVFYHL------LHRNKK 275 (474)
Q Consensus 234 fSpg-~~la~~s~~s-------------------------------~D~tIkLWdi~tG~~L~tl~~h------~~~v~~ 275 (474)
|||+ ..||+.+.+. .+.+|++||+.+|++...+..+ ...+..
T Consensus 180 ~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~ 259 (723)
T 1xfd_A 180 WSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITM 259 (723)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEE
T ss_pred ECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEE
Confidence 9985 4566654321 1237999999999987777754 567899
Q ss_pred EEEEecCCCeEEEEe----CCCcEEEEECCCCceEEeccc-cCCceE----EEEEcCCCcEEEE--Ec-CC------cEE
Q 011970 276 VDFIEQFNEKLLVKQ----ENENLQILDVRNAELMEVSRT-EFMTPS----AFIFLYENQLFLT--FR-NR------TVA 337 (474)
Q Consensus 276 V~F~~~~~~~ll~~~----~D~tIkIWDv~tg~~~~~l~~-h~~~v~----sv~Fspdg~llaS--~s-D~------tIk 337 (474)
++|+ |++..+++.. .+.+|.+||+.++++..++.. |..++. .++|||||+.|+. +. |+ .|.
T Consensus 260 ~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~ 338 (723)
T 1xfd_A 260 VKWA-TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHIT 338 (723)
T ss_dssp EEES-SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEE
T ss_pred EEEe-CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEE
Confidence 9998 5665554543 346899999999998877644 444443 7899999997764 33 77 577
Q ss_pred EEe-CCCcE---EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCC--CeEEEEeCCCC--eEEEEecC
Q 011970 338 VWN-FRGEL---VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSA--GSINVSSILTG--KCLAKINA 409 (474)
Q Consensus 338 lWd-~~G~l---l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~D--gtIklWdi~tG--~cl~tl~g 409 (474)
+|| ..+.. ++.+..+...+ +..++|||||++|+..+. .+ ++++||++..+ .....|.+
T Consensus 339 ~~d~~~~~~~~~~~~l~~~~~~~----~~~~~~spdg~~l~~~~~----------~~~~~~~~l~~~~~~~~~~~~~l~~ 404 (723)
T 1xfd_A 339 VSSSQPNSSNDNIQSITSGDWDV----TKILAYDEKGNKIYFLST----------EDLPRRRQLYSANTVGNFNRQCLSC 404 (723)
T ss_dssp EECSSCCSSSCCCCBSCCSSSCE----EEEEEEETTTTEEEEEES----------SSCTTCCEEEEECSSTTCCCBCSST
T ss_pred EEeccCCCCccceeEeecCCeEE----EeeeEEcCCCCEEEEEEc----------CCCCcceEEEEEeCCCCCCcceecc
Confidence 788 45433 66666432221 234799999999986654 13 88999998643 24444443
Q ss_pred ---CCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEE
Q 011970 410 ---TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTG 463 (474)
Q Consensus 410 ---H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSg 463 (474)
|.. .|.+++|||||+.|+..
T Consensus 405 ~~~~~~----------------------------------~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 405 DLVENC----------------------------------TYFSASFSHSMDFFLLK 427 (723)
T ss_dssp TSSSSC----------------------------------CCCEEEECTTSSEEEEE
T ss_pred cccCCC----------------------------------CeEEEEECCCCCEEEEE
Confidence 332 67889999999988754
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=3.7e-29 Score=257.08 Aligned_cols=287 Identities=14% Similarity=0.135 Sum_probs=206.0
Q ss_pred eEEEEEEeeCCC-EEEEEEeecCCCccceeeeEEEEeEe--ccCCCCCccceeeeccccCceEEEEeC------------
Q 011970 131 VIRSLFYNKNND-SLITVSVYASDNFSSLKCRSTKIEYI--RRGKPDSGFALFESESLKWPGFVEFDD------------ 195 (474)
Q Consensus 131 ~i~sv~fspdg~-~Lis~S~~~s~d~s~Lk~~~~~iw~i--~~G~~~~~~~lf~~~~~~~~~~V~Fs~------------ 195 (474)
.+....|++.|. .|++++.....+ -.+ -.+++|||+ .+|++..+..+.. +..++..++|++
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~-G~~-~~~i~lwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPD-GSY-NVAYQLVDTGGAPGTVLAQNSYKV--NKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTT-SCE-EEEEEEEECSSSTTCEEEEEEEEE--CGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCC-CeE-EEEEEEEeCCCCCCCEEeeeEEEc--ChhHHHHHHHHHHHHHHHHHcCCC
Confidence 456666777774 555776542222 000 048999999 8998643222222 223344455541
Q ss_pred -CCCeEEEEecCC------CcEEEeecCCCeEEEEE--cCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEE
Q 011970 196 -VNGKVLTYSAQD------SIYKVFDLKNYTMLYSI--SDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (474)
Q Consensus 196 -~nGk~LaS~s~D------~tiKlWdl~tg~~l~tl--~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~t 265 (474)
+.+..|++++.+ ++|++||+.++. +..+ +...|.+++||| |.+||+.+....+.+|++||+++|++. .
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~ 217 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-Q 217 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-E
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-E
Confidence 125667776654 799999997544 4444 357899999998 556666654333458999999999986 4
Q ss_pred EeecCcceeEEEEEecCCCeEEE-EeCCC--cEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc--CC--cEEE
Q 011970 266 FYHLLHRNKKVDFIEQFNEKLLV-KQENE--NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR--NR--TVAV 338 (474)
Q Consensus 266 l~~h~~~v~~V~F~~~~~~~ll~-~~~D~--tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s--D~--tIkl 338 (474)
+..|...+..++|+ |++.+|+. ++.|+ .|.+||+.++++ ..+.+|...+.+++|+|||+.|+.++ ++ .|.+
T Consensus 218 l~~~~~~~~~~~~s-pdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 218 VASFPRHNGAPAFS-PDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp EECCSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred eecCCCcccCEEEc-CCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 66677789999998 67888884 45555 499999999987 45667888999999999999888876 44 6777
Q ss_pred EeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCcc
Q 011970 339 WNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDD 418 (474)
Q Consensus 339 Wd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~ 418 (474)
||+.+..+..+..|..+ +.+++|||||++|++++.. ..+.+|.+||+.+|++ ..+..|.
T Consensus 296 ~d~~~~~~~~l~~~~~~-----~~~~~~spdG~~l~~~~~~--------~g~~~i~~~d~~~~~~-~~l~~~~------- 354 (415)
T 2hqs_A 296 VNINGGAPQRITWEGSQ-----NQDADVSSDGKFMVMVSSN--------GGQQHIAKQDLATGGV-QVLSSTF------- 354 (415)
T ss_dssp EETTSSCCEECCCSSSE-----EEEEEECTTSSEEEEEEEC--------SSCEEEEEEETTTCCE-EECCCSS-------
T ss_pred EECCCCCEEEEecCCCc-----ccCeEECCCCCEEEEEECc--------CCceEEEEEECCCCCE-EEecCCC-------
Confidence 78863334556666654 6889999999999988751 1246999999999988 4566654
Q ss_pred ccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCC---cEEEccC
Q 011970 419 ELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHG---LVHVWSN 474 (474)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~Dg---tVklWd~ 474 (474)
.+.+++|+|||+.|++++.|+ .|++||.
T Consensus 355 ----------------------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 355 ----------------------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp ----------------------------SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ----------------------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 688999999999999999887 7999873
No 133
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=7.9e-29 Score=281.74 Aligned_cols=329 Identities=9% Similarity=-0.004 Sum_probs=239.2
Q ss_pred ccccEEEEEee--ccEEEEeeCC------CeEEeeeccccceeeEeecCCCceE-------EEEEEeeCCCEEEEEEeec
Q 011970 87 KRTKVIEIVAA--RDIVFALAHS------GVCAAFSRETNRRICFLNVSPDEVI-------RSLFYNKNNDSLITVSVYA 151 (474)
Q Consensus 87 ~~~~V~~i~~s--~~~las~s~d------gtiklW~~~tg~~l~~l~g~~~~~i-------~sv~fspdg~~Lis~S~~~ 151 (474)
|...|.+++|| |+.||.++.+ ..|.+|+..+|+ +..|.+ |...+ .+++|||||+.|++++.+.
T Consensus 51 ~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~-~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~ 128 (1045)
T 1k32_A 51 NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITY-FSGKSTGRRMFTDVAGFDPDGNLIISTDAMQ 128 (1045)
T ss_dssp SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCC-CCEEEETTEECSEEEEECTTCCEEEEECTTS
T ss_pred CCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEccc-CCCcccccccccccccCCCCCEEEEEECCcC
Confidence 56677788887 9999988754 489999998776 677876 66777 9999999999666544221
Q ss_pred CCCccceeeeEEEEeEeccCCC----------------------------------------------------------
Q 011970 152 SDNFSSLKCRSTKIEYIRRGKP---------------------------------------------------------- 173 (474)
Q Consensus 152 s~d~s~Lk~~~~~iw~i~~G~~---------------------------------------------------------- 173 (474)
..+ .. ..+.+|++..|++
T Consensus 129 ~~~-~~---~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~ 204 (1045)
T 1k32_A 129 PFS-SM---TCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMST 204 (1045)
T ss_dssp SST-TC---CEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSS
T ss_pred CCc-cc---ceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCC
Confidence 110 00 1111222211110
Q ss_pred ------------------CCccceeeec----------cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc
Q 011970 174 ------------------DSGFALFESE----------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS 225 (474)
Q Consensus 174 ------------------~~~~~lf~~~----------~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~ 225 (474)
+....+|... ....+..++|| |||+.||+++ |++|.+||+++.+ +..+.
T Consensus 205 ~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~S-pDG~~la~~~-~~~i~~~d~~~~~-l~~l~ 281 (1045)
T 1k32_A 205 HVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLN-TDGRRILFSK-GGSIYIFNPDTEK-IEKIE 281 (1045)
T ss_dssp CCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEE-ESSSCEEEEE-TTEEEEECTTTCC-EEECC
T ss_pred cccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEc-CCCCEEEEEe-CCEEEEecCCceE-eeeec
Confidence 0011122110 00112356898 7999998874 8899999985444 44655
Q ss_pred CC-------------cEEEEEEc-CCc-eEEEEecCCCCccEEEEecCCCeEEEEEeecCc-ceeEEEEEecCCCeEEEE
Q 011970 226 DK-------------HVQEIKIS-PGI-MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH-RNKKVDFIEQFNEKLLVK 289 (474)
Q Consensus 226 ~~-------------~V~~vafS-pg~-~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~-~v~~V~F~~~~~~~ll~~ 289 (474)
.+ .|.+++|| |++ .||+.+ +..|.+|++.+|+... +..|.. .+..++|+ ++..++..
T Consensus 282 ~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~----~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s--dg~~l~~~ 354 (1045)
T 1k32_A 282 IGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS----RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD--TKVAFIHG 354 (1045)
T ss_dssp CCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE----TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS--SEEEEEEE
T ss_pred cCcccccccccccccccceeeecCCCCCEEEEEE----cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc--CCCeEEEE
Confidence 42 58899999 955 455553 5789999999988654 555656 78899997 67788888
Q ss_pred eCCCcEE-EEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEE
Q 011970 290 QENENLQ-ILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYI 366 (474)
Q Consensus 290 ~~D~tIk-IWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svaf 366 (474)
+.+..|. +||+.++++.... +|...+..++|||||+.|++++ |++|++||+. |++...+++|... +.+++|
T Consensus 355 s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~-----v~~~~~ 428 (1045)
T 1k32_A 355 TREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM-----ITDFTI 428 (1045)
T ss_dssp ETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC-----CCCEEE
T ss_pred ECCCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCC-----ccceEE
Confidence 8888888 9999998876665 8888999999999999999998 9999999995 9988888888876 578999
Q ss_pred CCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccccccccccccccccccc
Q 011970 367 TSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALE 446 (474)
Q Consensus 367 SpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 446 (474)
||||++||+++... +-......+++|++||+.+|+ +..+.+|..
T Consensus 429 SpDG~~la~~~~~~-~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~---------------------------------- 472 (1045)
T 1k32_A 429 SDNSRFIAYGFPLK-HGETDGYVMQAIHVYDMEGRK-IFAATTENS---------------------------------- 472 (1045)
T ss_dssp CTTSCEEEEEEEEC-SSTTCSCCEEEEEEEETTTTE-EEECSCSSS----------------------------------
T ss_pred CCCCCeEEEEecCc-cccccCCCCCeEEEEECCCCc-EEEeeCCCc----------------------------------
Confidence 99999999886510 000000124699999999988 778888874
Q ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 447 DITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 447 ~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
.+.+++|+|||+.|++++.++..++|+
T Consensus 473 ~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 473 HDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp BEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred ccCCceEcCCCCEEEEEecccCCcCcc
Confidence 788899999999999999999888886
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.97 E-value=2.6e-28 Score=234.57 Aligned_cols=279 Identities=10% Similarity=0.013 Sum_probs=214.8
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCc-eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCc
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDE-VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG 176 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~-~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~ 176 (474)
+++|++++.++++++||..+++.+.++...+.. .+.+++|+|||+.|+.++ ..+ ..+.+||+.+|+....
T Consensus 1 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---~~~------~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV---NKS------ESLVKIDLVTGETLGR 71 (337)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---TTT------TEEEEEETTTCCEEEE
T ss_pred CcEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEe---CCC------CeEEEEECCCCCeEee
Confidence 367999999999999999999999998753322 478999999998876544 344 5899999999886432
Q ss_pred cceeeec-cccCceEEEEeCCCCeEEEEec------------CCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCce-EE
Q 011970 177 FALFESE-SLKWPGFVEFDDVNGKVLTYSA------------QDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIM-LL 241 (474)
Q Consensus 177 ~~lf~~~-~~~~~~~V~Fs~~nGk~LaS~s------------~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~~-la 241 (474)
+++-... +...+..++|+ |||+.|+.++ .|+.|.+||+++++.+..+. ...+..++|||++. |+
T Consensus 72 ~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 72 IDLSTPEERVKSLFGAALS-PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLY 150 (337)
T ss_dssp EECCBTTEEEECTTCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEE
T ss_pred EEcCCcccccccccceEEC-CCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEE
Confidence 2211100 01246689998 7999888876 68999999999999888776 45788999998554 55
Q ss_pred EEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEe-CCC-----------------------cEEE
Q 011970 242 IFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENE-----------------------NLQI 297 (474)
Q Consensus 242 ~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~-~D~-----------------------tIkI 297 (474)
++ ++.|.+||+++|+++..+..+.. ...+.|+ |++..+++.+ .++ .|.+
T Consensus 151 ~~-----~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 223 (337)
T 1pby_B 151 GL-----GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQ-PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLT 223 (337)
T ss_dssp EE-----SSSEEEEETTTTEEEEEECSTTT-TTTTBCC-CBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEE
T ss_pred Ee-----CCeEEEEECCCCcEeeeeecccc-CCCceeC-CCccEEeeeccCCCceeeeeeccccccccccccccccceEE
Confidence 54 36799999999999988875431 1233554 5666665544 333 4789
Q ss_pred EECCCCceEEe-ccccCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEE
Q 011970 298 LDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIIS 375 (474)
Q Consensus 298 WDv~tg~~~~~-l~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS 375 (474)
||+.++++... +..|...+..++|+|||++++++ |++|.+||+. |+++..+..+.. +.+++|+|||++|+.
T Consensus 224 ~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~ 296 (337)
T 1pby_B 224 MDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPHS------YYSVNVSTDGSTVWL 296 (337)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSSC------CCEEEECTTSCEEEE
T ss_pred EeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCCc------eeeEEECCCCCEEEE
Confidence 99999998632 44566788899999999998888 8999999995 898888875533 478999999999998
Q ss_pred EecCCCccccccCCCCeEEEEeCCCCeEEEEecCCC
Q 011970 376 YCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 411 (474)
Q Consensus 376 ~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~ 411 (474)
++. |++|++||+.+|+.++++..+.
T Consensus 297 ~~~-----------~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 297 GGA-----------LGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp ESB-----------SSEEEEEETTTCCEEEEEECGG
T ss_pred EcC-----------CCcEEEEECcCCcEEEEEEcCC
Confidence 765 8999999999999999997764
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.97 E-value=1.7e-27 Score=231.35 Aligned_cols=274 Identities=9% Similarity=0.024 Sum_probs=214.4
Q ss_pred ceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCe-EEEEecCCC
Q 011970 130 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGK-VLTYSAQDS 208 (474)
Q Consensus 130 ~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk-~LaS~s~D~ 208 (474)
..+..++|+|+|+.|.+++..+.. .-+-.++.+||..+|+.... +.. ...+..++|+ |||+ +++++..++
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~---~~~~~~v~~~d~~~~~~~~~---~~~--~~~~~~~~~s-~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRK---LDKGGVVYRLDPVTLEVTQA---IHN--DLKPFGATIN-NTTQTLWFGNTVNS 111 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTT---TEESEEEEEECTTTCCEEEE---EEE--SSCCCSEEEE-TTTTEEEEEETTTT
T ss_pred cCccceEECCCCCEEEEEcCCCcC---CCCCccEEEEcCCCCeEEEE---Eec--CCCcceEEEC-CCCCEEEEEecCCC
Confidence 347899999999999887643221 11226899999999886442 222 2335689998 7888 566677789
Q ss_pred cEEEeecCCCeEEEEEcCC-----------cEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEE
Q 011970 209 IYKVFDLKNYTMLYSISDK-----------HVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKV 276 (474)
Q Consensus 209 tiKlWdl~tg~~l~tl~~~-----------~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V 276 (474)
+|.+||+++++.+.++... .+.+++|+| |..++++.. +.++.|.+||+++++.+..+..+......+
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-GKESVIWVVDGGNIKLKTAIQNTGKMSTGL 190 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE-SSSCEEEEEETTTTEEEEEECCCCTTCCCC
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec-CCCceEEEEcCCCCceEEEecCCCCccceE
Confidence 9999999999998887632 278999998 455655532 346789999999999999998555667889
Q ss_pred EEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc----cCCceEEEEEcCCCcEEEEEc--CCcEEEEeCC-CcEEEEe
Q 011970 277 DFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT----EFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GELVTSF 349 (474)
Q Consensus 277 ~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~----h~~~v~sv~Fspdg~llaS~s--D~tIklWd~~-G~ll~tl 349 (474)
+|+ |++++++++..|+.|.+||+.+++.+..+.. +...+..++|+|||+.+..++ +++|.+||.. |+++..+
T Consensus 191 ~~s-~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 191 ALD-SEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp EEE-TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred EEC-CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 987 6788899998999999999999998876543 556788899999999665554 6999999995 9999888
Q ss_pred ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccc
Q 011970 350 EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSK 429 (474)
Q Consensus 350 ~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~ 429 (474)
..+.. ..++|+|||++|+.++. .+++|.+||+.+|+.+.++..+.
T Consensus 270 ~~~~~-------~~~~~s~dg~~l~v~~~----------~~~~v~~~d~~~~~~~~~~~~~~------------------ 314 (353)
T 3vgz_A 270 AAPES-------LAVLFNPARNEAYVTHR----------QAGKVSVIDAKSYKVVKTFDTPT------------------ 314 (353)
T ss_dssp ECSSC-------CCEEEETTTTEEEEEET----------TTTEEEEEETTTTEEEEEEECCS------------------
T ss_pred EcCCC-------ceEEECCCCCEEEEEEC----------CCCeEEEEECCCCeEEEEEecCC------------------
Confidence 75432 36999999996665542 38999999999999999987654
Q ss_pred cccccccccccccccccCEEEEEEcCCCCEEEEEcCC
Q 011970 430 KLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRH 466 (474)
Q Consensus 430 ~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~D 466 (474)
.+++++|+|||+.|+.+..+
T Consensus 315 -----------------~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 315 -----------------HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -----------------EEEEEEECTTSCEEEEEEEC
T ss_pred -----------------CCCeEEEcCCCCEEEEEEcc
Confidence 67899999999988777655
No 136
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=2.8e-28 Score=277.25 Aligned_cols=316 Identities=11% Similarity=0.022 Sum_probs=229.0
Q ss_pred cccEEEEEeeccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeec--CCCccceeeeEEEE
Q 011970 88 RTKVIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYA--SDNFSSLKCRSTKI 165 (474)
Q Consensus 88 ~~~V~~i~~s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~--s~d~s~Lk~~~~~i 165 (474)
...+..+.++++.||..+. +.+.+|++.+|+ ...|.+ |...|.+++|||||+.||+++.+. ..+ .++.+
T Consensus 14 ~~~~~~~~~S~~~iaf~~~-~~l~~~~~~gg~-~~~lt~-~~~~v~~~~~SPDG~~la~~s~~~~~~~~------~~i~~ 84 (1045)
T 1k32_A 14 PNLLLNPDIHGDRIIFVCC-DDLWEHDLKSGS-TRKIVS-NLGVINNARFFPDGRKIAIRVMRGSSLNT------ADLYF 84 (1045)
T ss_dssp CCCCEEEEEETTEEEEEET-TEEEEEETTTCC-EEEEEC-SSSEEEEEEECTTSSEEEEEEEESTTCCE------EEEEE
T ss_pred cceEeCcEEeCCEEEEEEC-CcEEEEECCCCc-EEEeee-CCCcccCeEECCCCCEEEEEEeeccCCCC------CeEEE
Confidence 3457788888888888876 799999998766 456775 778899999999999999988652 122 57889
Q ss_pred eEeccCCCCCccceeeeccccCc-------eEEEEeCCCCeEEEEecCC------CcEEEeecCCCeEEEEE--------
Q 011970 166 EYIRRGKPDSGFALFESESLKWP-------GFVEFDDVNGKVLTYSAQD------SIYKVFDLKNYTMLYSI-------- 224 (474)
Q Consensus 166 w~i~~G~~~~~~~lf~~~~~~~~-------~~V~Fs~~nGk~LaS~s~D------~tiKlWdl~tg~~l~tl-------- 224 (474)
|++..|+.. .|..+ ...+ ..++|| |||++|++++.| ..+.+||++++++....
T Consensus 85 ~d~~~g~~~---~lt~~--~~~~~~~~~~~~~~~~S-pDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~ 158 (1045)
T 1k32_A 85 YNGENGEIK---RITYF--SGKSTGRRMFTDVAGFD-PDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHIL 158 (1045)
T ss_dssp EETTTTEEE---ECCCC--CEEEETTEECSEEEEEC-TTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEE
T ss_pred EECCCCCeE---EcccC--CCcccccccccccccCC-CCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceee
Confidence 998877641 22222 2223 689998 799988887755 35777888777643110
Q ss_pred -------------------------------------------cCCcEEEEEEcCCceEEEEecCCCCccEEEEecCC-C
Q 011970 225 -------------------------------------------SDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-G 260 (474)
Q Consensus 225 -------------------------------------------~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~t-G 260 (474)
+...|..++|+|+ .++..+ +.|++++||.+.. |
T Consensus 159 ~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~--~~dg~~~l~~~~~~g 235 (1045)
T 1k32_A 159 FADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFIT--DIDGFGQIYSTDLDG 235 (1045)
T ss_dssp EETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEE--CTTSSCEEEEEETTS
T ss_pred eCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEE--eccCceEEEEEeCCC
Confidence 1123455666666 333222 2355666775432 2
Q ss_pred eEEEEE---------------------------------------ee-----------cCcceeEEEEEecCCCeEEEEe
Q 011970 261 TVLKVF---------------------------------------YH-----------LLHRNKKVDFIEQFNEKLLVKQ 290 (474)
Q Consensus 261 ~~L~tl---------------------------------------~~-----------h~~~v~~V~F~~~~~~~ll~~~ 290 (474)
..++.+ .+ |...+..++|++|++..|++++
T Consensus 236 ~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~ 315 (1045)
T 1k32_A 236 KDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS 315 (1045)
T ss_dssp CSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE
T ss_pred CcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE
Confidence 222222 21 1224677888735566676666
Q ss_pred CCCcEEEEECCCCceEEeccccCC-ceEEEEEcCCCcEEEEEc-CCcEE-EEeCCCcEEEEeccCCCCcCCCCeeEEEEC
Q 011970 291 ENENLQILDVRNAELMEVSRTEFM-TPSAFIFLYENQLFLTFR-NRTVA-VWNFRGELVTSFEDHLLWHPDCNTNNIYIT 367 (474)
Q Consensus 291 ~D~tIkIWDv~tg~~~~~l~~h~~-~v~sv~Fspdg~llaS~s-D~tIk-lWd~~G~ll~tl~gH~~~~~~~~v~svafS 367 (474)
+++|.+||+.+++... +..|.. .+..++|+ ||+.|++++ +..|. +||+.+..+..+.+|... +..++||
T Consensus 316 -~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~-----~~~~~~S 387 (1045)
T 1k32_A 316 -RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGN-----VFAMGVD 387 (1045)
T ss_dssp -TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCS-----EEEEEEC
T ss_pred -cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccc-----eeeeEEC
Confidence 7889999998888665 455666 89999999 999999998 77888 889975445566677654 6899999
Q ss_pred CCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccC
Q 011970 368 SDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALED 447 (474)
Q Consensus 368 pDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 447 (474)
|||++||+++. |++|++||+.+|++...+.+|.. .
T Consensus 388 pDG~~la~~~~-----------~~~v~~~d~~tg~~~~~~~~~~~----------------------------------~ 422 (1045)
T 1k32_A 388 RNGKFAVVAND-----------RFEIMTVDLETGKPTVIERSREA----------------------------------M 422 (1045)
T ss_dssp TTSSEEEEEET-----------TSEEEEEETTTCCEEEEEECSSS----------------------------------C
T ss_pred CCCCEEEEECC-----------CCeEEEEECCCCceEEeccCCCC----------------------------------C
Confidence 99999999876 89999999999999988888875 7
Q ss_pred EEEEEEcCCCCEEEEEcCCC----------cEEEccC
Q 011970 448 ITSLFYDEERNEIYTGNRHG----------LVHVWSN 474 (474)
Q Consensus 448 V~slafSpDg~~LaSgs~Dg----------tVklWd~ 474 (474)
|.+++|||||+.||+++.++ +|++||.
T Consensus 423 v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 423 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred ccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 88899999999999988754 9999983
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.97 E-value=8.4e-29 Score=266.69 Aligned_cols=307 Identities=12% Similarity=0.062 Sum_probs=220.0
Q ss_pred EEeeccEEEEeeCCCeEEeeecccccee-eEeecCCC-----------------ceEEEEEEeeCCCEEEEEEeecCCCc
Q 011970 94 IVAARDIVFALAHSGVCAAFSRETNRRI-CFLNVSPD-----------------EVIRSLFYNKNNDSLITVSVYASDNF 155 (474)
Q Consensus 94 i~~s~~~las~s~dgtiklW~~~tg~~l-~~l~g~~~-----------------~~i~sv~fspdg~~Lis~S~~~s~d~ 155 (474)
+.+.++.+++.+.|+ | +||..||+.+ ..|-. +. ..|.+++|||| ..|+.++ +
T Consensus 31 ~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~-~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~----~-- 100 (706)
T 2z3z_A 31 LQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFS-AADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT----Q-- 100 (706)
T ss_dssp CEEETTEEEEEETTE-E-EEEC-------CEEEE-HHHHHTTC-----------CCCEEEEETTT-TEEEEEE----T--
T ss_pred CcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeec-hhHhhhhccchhccccccccCceeEEECCC-CeEEEEE----C--
Confidence 344477888888888 7 9999999984 45443 22 35999999999 5555432 2
Q ss_pred cceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCC-----CeEEEEEcC--Cc
Q 011970 156 SSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN-----YTMLYSISD--KH 228 (474)
Q Consensus 156 s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~t-----g~~l~tl~~--~~ 228 (474)
.++.+||+.+|++. .+... ...+..++|| |||+.||++ .|++|++||+.+ |+....... ..
T Consensus 101 -----~~i~~~d~~~~~~~---~l~~~--~~~~~~~~~S-pdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~ 168 (706)
T 2z3z_A 101 -----GGLVGFDMLARKVT---YLFDT--NEETASLDFS-PVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTET 168 (706)
T ss_dssp -----TEEEEEETTTTEEE---EEECC--TTCCTTCEEC-TTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTT
T ss_pred -----CEEEEEECCCCceE---EccCC--cccccCCcCC-CCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCC
Confidence 58999999888752 23332 2345578998 799999995 689999999998 887654332 22
Q ss_pred --------------EEEEEEcCCc-eEEEEec------------------------------CCCCccEEEEecCCCeEE
Q 011970 229 --------------VQEIKISPGI-MLLIFNR------------------------------SSSHVPLKILSIEDGTVL 263 (474)
Q Consensus 229 --------------V~~vafSpg~-~la~~s~------------------------------~s~D~tIkLWdi~tG~~L 263 (474)
+.+++|||++ .||+.+. ...+..|++||+++|++.
T Consensus 169 ~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~ 248 (706)
T 2z3z_A 169 LVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV 248 (706)
T ss_dssp EEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE
T ss_pred eEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE
Confidence 4899999855 5555531 124578999999999976
Q ss_pred EEEe--ecCcceeEEEEEecCCCeEEEEeCCC-----cEEEEECCCC-ceEEecc-ccCCc---eEEEEEcC--CCcEEE
Q 011970 264 KVFY--HLLHRNKKVDFIEQFNEKLLVKQENE-----NLQILDVRNA-ELMEVSR-TEFMT---PSAFIFLY--ENQLFL 329 (474)
Q Consensus 264 ~tl~--~h~~~v~~V~F~~~~~~~ll~~~~D~-----tIkIWDv~tg-~~~~~l~-~h~~~---v~sv~Fsp--dg~lla 329 (474)
.... .|...+..++|+ |++..|++++.|+ +|.+||+.++ ++..... ++..+ +..++|+| ||++++
T Consensus 249 ~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~ 327 (706)
T 2z3z_A 249 YLQTGEPKEKFLTNLSWS-PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIW 327 (706)
T ss_dssp ECCCCSCTTCEEEEEEEC-TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEE
T ss_pred eeccCCCCceeEeeEEEE-CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEE
Confidence 6553 455678999998 6788888877665 9999999999 4433332 22222 35789999 999999
Q ss_pred EEc-CCcEEEEeC--CCcEEEEeccCCCCcCCCCeeE-EEECCCCCEEEEEecCCCccccccCCCC----eEEEEeCCCC
Q 011970 330 TFR-NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNN-IYITSDQDLIISYCKAEPEDQWMEGSAG----SINVSSILTG 401 (474)
Q Consensus 330 S~s-D~tIklWd~--~G~ll~tl~gH~~~~~~~~v~s-vafSpDg~~LaS~s~~~~~~~~~~s~Dg----tIklWdi~tG 401 (474)
+++ |++++||++ +|++++.+.+|... +.+ ++|+|||+.|+..+. .++ .|..||+.+|
T Consensus 328 ~~~~~g~~~l~~~~~~~~~~~~l~~~~~~-----v~~~~~~spdg~~l~~~~~----------~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 328 QSRRDGWNHLYLYDTTGRLIRQVTKGEWE-----VTNFAGFDPKGTRLYFEST----------EASPLERHFYCIDIKGG 392 (706)
T ss_dssp EECTTSSCEEEEEETTSCEEEECCCSSSC-----EEEEEEECTTSSEEEEEES----------SSCTTCBEEEEEETTCC
T ss_pred EEccCCccEEEEEECCCCEEEecCCCCeE-----EEeeeEEcCCCCEEEEEec----------CCCCceEEEEEEEcCCC
Confidence 998 999999987 48899999888654 555 799999998876653 133 6777787777
Q ss_pred eEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCC----CcEEEccC
Q 011970 402 KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRH----GLVHVWSN 474 (474)
Q Consensus 402 ~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~D----gtVklWd~ 474 (474)
+ +..|. |.. .+.+++|||||+.|+.+..+ +.|++||.
T Consensus 393 ~-~~~l~-~~~----------------------------------~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 393 K-TKDLT-PES----------------------------------GMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp C-CEESC-CSS----------------------------------SEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred C-ceecc-CCC----------------------------------ceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 6 55554 442 78999999999998876443 56999973
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=2.1e-26 Score=223.23 Aligned_cols=280 Identities=14% Similarity=0.109 Sum_probs=205.9
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCC-CCc
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKP-DSG 176 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~-~~~ 176 (474)
+..+++.+.+++|++||..+|+.+..+.. +...+ +++|+|||+.|+.++. .+ ..+.+||+.+|++ ..
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~-~~~~s~dg~~l~~~~~---~~------~~i~~~d~~~~~~~~~- 77 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITL-GYDFV-DTAITSDCSNVVVTSD---FC------QTLVQIETQLEPPKVV- 77 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEEC-CCCEE-EEEECSSSCEEEEEES---TT------CEEEEEECSSSSCEEE-
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEc-cCCcc-eEEEcCCCCEEEEEeC---CC------CeEEEEECCCCceeEE-
Confidence 56688899999999999999999999886 44556 9999999998877652 33 4889999998886 22
Q ss_pred cceeeeccccCceE-EEEeCCCCeEEEEecCCC---cEEEeecCCCeEEEEEc-CCcEEEEEEcCCc-eEEEEecCCCCc
Q 011970 177 FALFESESLKWPGF-VEFDDVNGKVLTYSAQDS---IYKVFDLKNYTMLYSIS-DKHVQEIKISPGI-MLLIFNRSSSHV 250 (474)
Q Consensus 177 ~~lf~~~~~~~~~~-V~Fs~~nGk~LaS~s~D~---tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~-~la~~s~~s~D~ 250 (474)
.+.. ...+.. ++|+ |||++|+.+..++ +|++||+++++++.++. .....+++|+|++ .++++.. .+.
T Consensus 78 --~~~~--~~~~~~~~~~s-~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~--~~~ 150 (331)
T 3u4y_A 78 --AIQE--GQSSMADVDIT-PDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDR--SSA 150 (331)
T ss_dssp --EEEE--CSSCCCCEEEC-TTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEE--TTT
T ss_pred --eccc--CCCCccceEEC-CCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEec--CCC
Confidence 1222 223446 9998 7999998555553 99999999999988886 4578999999855 4665533 346
Q ss_pred c-EEEEecCCCeEEEEE----eecCcceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCce---EEeccccCCceEEEEE
Q 011970 251 P-LKILSIEDGTVLKVF----YHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAEL---MEVSRTEFMTPSAFIF 321 (474)
Q Consensus 251 t-IkLWdi~tG~~L~tl----~~h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~tg~~---~~~l~~h~~~v~sv~F 321 (474)
. |++|++.....+... .........++|+ |++.++++++ .+++|++||+.++++ +..+..+ ..+..++|
T Consensus 151 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (331)
T 3u4y_A 151 NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFT-PDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVV 228 (331)
T ss_dssp TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEEC-TTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEE
T ss_pred ceEEEEEECCCCcEeecCCccccCCCCccceEEC-CCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEE
Confidence 7 999998764433211 1223456889987 6677777764 789999999999998 7666544 57889999
Q ss_pred cCCCcEEEEE-c-CCcEEEEeCC-CcE--EEEeccC----CCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCe
Q 011970 322 LYENQLFLTF-R-NRTVAVWNFR-GEL--VTSFEDH----LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGS 392 (474)
Q Consensus 322 spdg~llaS~-s-D~tIklWd~~-G~l--l~tl~gH----~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dgt 392 (474)
+|||++++.+ . +++|.+||.. |++ +.++..+ ..+.. ..+.++|+|||++|+.++. .+++
T Consensus 229 spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~v~~~----------~~~~ 296 (331)
T 3u4y_A 229 SRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLF--GANQMALNKTETKLFISAN----------ISRE 296 (331)
T ss_dssp CTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGT--TCCCEEECTTSSEEEEEET----------TTTE
T ss_pred CCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcc--cccceEECCCCCEEEEecC----------CCCc
Confidence 9999965544 4 8899999995 887 6666655 22211 1356899999999876653 3789
Q ss_pred EEEEeCCCCeEEEEecCCC
Q 011970 393 INVSSILTGKCLAKINATN 411 (474)
Q Consensus 393 IklWdi~tG~cl~tl~gH~ 411 (474)
|++||+.+ +.+..+.++.
T Consensus 297 v~v~d~~~-~~~~~~~~~~ 314 (331)
T 3u4y_A 297 LKVFTISG-KVVGYVAGIE 314 (331)
T ss_dssp EEEEETTS-CEEEECTTCC
T ss_pred EEEEEecC-Ccccceeccc
Confidence 99999865 4455555544
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=2.7e-28 Score=263.71 Aligned_cols=281 Identities=13% Similarity=0.130 Sum_probs=212.4
Q ss_pred CceEEEEEEeeCCCEEEEEEe-ecCCCccceeeeEEEEeEeccCCCCCccceeeec-cc---------------------
Q 011970 129 DEVIRSLFYNKNNDSLITVSV-YASDNFSSLKCRSTKIEYIRRGKPDSGFALFESE-SL--------------------- 185 (474)
Q Consensus 129 ~~~i~sv~fspdg~~Lis~S~-~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~-~~--------------------- 185 (474)
.+.|.+++|||||+.|++++. ++... ..++.+|++.+|+... ++... ..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~-----~~~i~~~d~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRN-----QLDLWSYDIGSGQTRL---LVDSKVVLPGTETLSDEEKARRERQRIAA 107 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTT-----EEEEEEEETTTCCEEE---EECGGGTC--------------------C
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCc-----ccEEEEEECCCCceeE---ccchhhcccccccccchhhhhhhhhhhcc
Confidence 356999999999999999874 32111 1389999999988622 23221 01
Q ss_pred -cCceEEEEeCCCCeEEEEecCCCcEEEeecCCC---eEEEEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecCC
Q 011970 186 -KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY---TMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED 259 (474)
Q Consensus 186 -~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg---~~l~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~t 259 (474)
..+..++|| |||++|++++. ++|++||+.++ ++ ..+. ...+..++|||++..+++.. +..|++||+.+
T Consensus 108 ~~~v~~~~~S-pDg~~l~~~~~-~~i~~~d~~~~~~~~~-~~l~~~~~~~~~~~~SPDG~~la~~~---~~~i~~~d~~~ 181 (741)
T 2ecf_A 108 MTGIVDYQWS-PDAQRLLFPLG-GELYLYDLKQEGKAAV-RQLTHGEGFATDAKLSPKGGFVSFIR---GRNLWVIDLAS 181 (741)
T ss_dssp CEESCCCEEC-TTSSEEEEEET-TEEEEEESSSCSTTSC-CBCCCSSSCEEEEEECTTSSEEEEEE---TTEEEEEETTT
T ss_pred ccCcceeEEC-CCCCEEEEEeC-CcEEEEECCCCCcceE-EEcccCCcccccccCCCCCCEEEEEe---CCcEEEEecCC
Confidence 125579998 79999999886 99999999988 43 3333 46799999998665444432 35899999999
Q ss_pred CeEEEEEeecCcc----------------eeEEEEEecCCCeEEEEeCCC------------------------------
Q 011970 260 GTVLKVFYHLLHR----------------NKKVDFIEQFNEKLLVKQENE------------------------------ 293 (474)
Q Consensus 260 G~~L~tl~~h~~~----------------v~~V~F~~~~~~~ll~~~~D~------------------------------ 293 (474)
|++.+....+... +..++|+ |++.+|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~S-pDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWA-PDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEEC-TTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEEC-CCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 9987765544332 4779997 7888899887665
Q ss_pred ---cEEEEECCC-CceEEecc--ccCCceEEEEEcCCCcEEEEEc------CCcEEEEeCC-CcEEEEeccCCC-CcCCC
Q 011970 294 ---NLQILDVRN-AELMEVSR--TEFMTPSAFIFLYENQLFLTFR------NRTVAVWNFR-GELVTSFEDHLL-WHPDC 359 (474)
Q Consensus 294 ---tIkIWDv~t-g~~~~~l~--~h~~~v~sv~Fspdg~llaS~s------D~tIklWd~~-G~ll~tl~gH~~-~~~~~ 359 (474)
+|.+||+.+ +++..+.. .|...+..++| |||+.|+..+ +.+|.+||+. |++...+..|.. |+.
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~-- 337 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVP-- 337 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCC--
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCC--
Confidence 889999999 99877654 47788999999 9999998653 4589999995 999888887753 421
Q ss_pred CeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCC-CCeEEEEecCCCCCCCCccccCCCCCCcccccccccccc
Q 011970 360 NTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL-TGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIR 438 (474)
Q Consensus 360 ~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~-tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (474)
.+.+++|||||++|++++. ||+++||.+. +|+ +..|.+|..
T Consensus 338 ~~~~~~~spdg~~~~~~~~-----------~g~~~l~~~~~~~~-~~~l~~~~~-------------------------- 379 (741)
T 2ecf_A 338 LHNSLRFLDDGSILWSSER-----------TGFQHLYRIDSKGK-AAALTHGNW-------------------------- 379 (741)
T ss_dssp CCSCCEECTTSCEEEEECT-----------TSSCEEEEECSSSC-EEESCCSSS--------------------------
T ss_pred cCCceEECCCCeEEEEecC-----------CCccEEEEEcCCCC-eeeeeecce--------------------------
Confidence 1468999999999988765 8888888775 577 888888864
Q ss_pred ccccccccCEEEE-EEcCCCCEEE-EEcCCC--cEEEcc
Q 011970 439 STVGEALEDITSL-FYDEERNEIY-TGNRHG--LVHVWS 473 (474)
Q Consensus 439 ~~~~~~l~~V~sl-afSpDg~~La-Sgs~Dg--tVklWd 473 (474)
.|.++ +|||||+.|+ +++.|+ +++||+
T Consensus 380 --------~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 380 --------SVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp --------CEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred --------EEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 78787 5999999875 566666 899996
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=1.4e-28 Score=264.74 Aligned_cols=277 Identities=13% Similarity=0.111 Sum_probs=200.4
Q ss_pred eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccc--cCceEEEEeCCCCeEEEEecCC-
Q 011970 131 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESL--KWPGFVEFDDVNGKVLTYSAQD- 207 (474)
Q Consensus 131 ~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~--~~~~~V~Fs~~nGk~LaS~s~D- 207 (474)
.+.+++|||||++|++ + .| .++++|++.+|++. .++..... ..+.+++|| |||++||+++.|
T Consensus 18 ~~~~~~~spdg~~~~~-~----~d------g~i~~~d~~~g~~~---~~~~~~~~~~~~v~~~~~S-pDg~~l~~~~~~~ 82 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-E----QK------GTVRLWNVETNTST---VLIEGKKIESLRAIRYEIS-PDREYALFSYNVE 82 (723)
T ss_dssp CCCCCCBSSSSCBCCC-C----SS------SCEEEBCGGGCCCE---EEECTTTTTTTTCSEEEEC-TTSSEEEEEESCC
T ss_pred cccccEEcCCCcEEEE-e----CC------CCEEEEECCCCcEE---EEeccccccccccceEEEC-CCCCEEEEEecCc
Confidence 3688999999996654 2 34 58999999999863 23432111 136799998 799999999875
Q ss_pred --------CcEEEeecCCCeEEEEEc-----CCcEEEEEEcCCc-eEEEEecCCCCccEEEEecCCCeEEEEEeecCcc-
Q 011970 208 --------SIYKVFDLKNYTMLYSIS-----DKHVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR- 272 (474)
Q Consensus 208 --------~tiKlWdl~tg~~l~tl~-----~~~V~~vafSpg~-~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~- 272 (474)
++|.|||++++++ ..+. ...|..++|||++ +||..+ +.+|++||+.+|++.+....+...
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~----~~~i~~~~~~~g~~~~~~~~~~~~~ 157 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIF----ENNIYYCAHVGKQAIRVVSTGKEGV 157 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEE----TTEEEEESSSSSCCEEEECCCBTTT
T ss_pred cceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEE----CCeEEEEECCCCceEEEecCCCCCc
Confidence 7788999999986 3343 1248899999855 566553 368999999999988776643332
Q ss_pred -----------------eeEEEEEecCCCeEEEEeCCC----------------------------------cEEEEECC
Q 011970 273 -----------------NKKVDFIEQFNEKLLVKQENE----------------------------------NLQILDVR 301 (474)
Q Consensus 273 -----------------v~~V~F~~~~~~~ll~~~~D~----------------------------------tIkIWDv~ 301 (474)
+..++|+ |++.+|++++.|+ +|++||+.
T Consensus 158 ~~~g~~~~v~~ee~~~~~~~~~~S-pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~ 236 (723)
T 1xfd_A 158 IYNGLSDWLYEEEILKTHIAHWWS-PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN 236 (723)
T ss_dssp EEEEECCHHHHHTTSSSSEEEEEC-TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS
T ss_pred eECcccceeEEEEeccCcceEEEC-CCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC
Confidence 3789997 7888888876543 89999999
Q ss_pred CCceEEecccc------CCceEEEEEcCCCcEEEEEc-----CCcEEEEeCC-CcEEEEecc-CCCCcCCCCeeEEEECC
Q 011970 302 NAELMEVSRTE------FMTPSAFIFLYENQLFLTFR-----NRTVAVWNFR-GELVTSFED-HLLWHPDCNTNNIYITS 368 (474)
Q Consensus 302 tg~~~~~l~~h------~~~v~sv~Fspdg~llaS~s-----D~tIklWd~~-G~ll~tl~g-H~~~~~~~~v~svafSp 368 (474)
++++...+..+ ...+.+++|||||+++++.+ +.+|.+||+. |++...+.. |..|+... ...++|||
T Consensus 237 ~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~-~~~~~~sp 315 (723)
T 1xfd_A 237 GPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQ-NEEPVFSK 315 (723)
T ss_dssp SSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCC-CCCCEECT
T ss_pred CCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEecc-CCCceEcC
Confidence 99976665544 66889999999999997764 2589999995 898887754 44553100 02789999
Q ss_pred CCCEEEEE-ecCCCccccccCCCC------eEEEEe-CCCCe--EEEEecCCCCCCCCccccCCCCCCcccccccccccc
Q 011970 369 DQDLIISY-CKAEPEDQWMEGSAG------SINVSS-ILTGK--CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIR 438 (474)
Q Consensus 369 Dg~~LaS~-s~~~~~~~~~~s~Dg------tIklWd-i~tG~--cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (474)
||+.|+.. +. .|+ .|.+|| ..+|+ |+..|..+..
T Consensus 316 dg~~l~~~~~~----------~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~-------------------------- 359 (723)
T 1xfd_A 316 DGRKFFFIRAI----------PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDW-------------------------- 359 (723)
T ss_dssp TSCSEEEEEEE----------CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSS--------------------------
T ss_pred CCCeEEEEEec----------ccCCCcceeEEEEEeccCCCCccceeEeecCCe--------------------------
Confidence 99988864 32 255 577777 34444 2666654331
Q ss_pred ccccccccCEEE-EEEcCCCCEEEEEcCC---CcEEEcc
Q 011970 439 STVGEALEDITS-LFYDEERNEIYTGNRH---GLVHVWS 473 (474)
Q Consensus 439 ~~~~~~l~~V~s-lafSpDg~~LaSgs~D---gtVklWd 473 (474)
.+.. ++|||||+.||..+.+ ++++||+
T Consensus 360 --------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 360 --------DVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp --------CEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred --------EEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 3444 6999999999866554 8899996
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=1.6e-26 Score=224.13 Aligned_cols=278 Identities=9% Similarity=0.081 Sum_probs=193.9
Q ss_pred EEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEE-ecCCCcEEEe
Q 011970 135 LFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTY-SAQDSIYKVF 213 (474)
Q Consensus 135 v~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS-~s~D~tiKlW 213 (474)
..|+++++.+..+. +.+ .++.+||+.+|++... +.. ....+ .++|+ |||+.|+. +..+++|.+|
T Consensus 3 ~~~~~~~~~~~v~~---~~~------~~v~~~d~~~~~~~~~---~~~-~~~~~-~~~~s-~dg~~l~~~~~~~~~i~~~ 67 (331)
T 3u4y_A 3 AMFQTTSNFGIVVE---QHL------RRISFFSTDTLEILNQ---ITL-GYDFV-DTAIT-SDCSNVVVTSDFCQTLVQI 67 (331)
T ss_dssp ----CCCCEEEEEE---GGG------TEEEEEETTTCCEEEE---EEC-CCCEE-EEEEC-SSSCEEEEEESTTCEEEEE
T ss_pred eeEcCCCCEEEEEe---cCC------CeEEEEeCcccceeee---EEc-cCCcc-eEEEc-CCCCEEEEEeCCCCeEEEE
Confidence 35666666654332 244 6899999999987432 222 23445 89998 79985554 4458999999
Q ss_pred ecCCCeE-EEEEc-CCcEEE-EEEcCCceEEEEecCCCCc--cEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEE
Q 011970 214 DLKNYTM-LYSIS-DKHVQE-IKISPGIMLLIFNRSSSHV--PLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV 288 (474)
Q Consensus 214 dl~tg~~-l~tl~-~~~V~~-vafSpg~~la~~s~~s~D~--tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~ 288 (474)
|+++++. ...+. ...... ++|+|++..+..+ ...++ .|++||+++|+++.++..+ .....++|+ |++.++++
T Consensus 68 d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~s-pdg~~l~~ 144 (331)
T 3u4y_A 68 ETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTV-TGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAIS-PNGNGLIL 144 (331)
T ss_dssp ECSSSSCEEEEEEECSSCCCCEEECTTSSEEEEC-CCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEEC-TTSSCEEE
T ss_pred ECCCCceeEEecccCCCCccceEECCCCCEEEEe-cCCCCcccEEEEECCCCCeEEEEECC-CCccceEEC-CCCCEEEE
Confidence 9999997 66665 334445 9999855433332 22223 8999999999999998854 445889997 66776777
Q ss_pred E-eCCCc-EEEEECCCCceE-----EeccccCCceEEEEEcCCCc-EEEEEc-CCcEEEEeCC-CcE---EEEeccCCCC
Q 011970 289 K-QENEN-LQILDVRNAELM-----EVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-GEL---VTSFEDHLLW 355 (474)
Q Consensus 289 ~-~~D~t-IkIWDv~tg~~~-----~~l~~h~~~v~sv~Fspdg~-llaS~s-D~tIklWd~~-G~l---l~tl~gH~~~ 355 (474)
+ ..++. |++||+.....+ +.+ .+...+..++|+|||+ ++++.. +++|.+||++ |++ +.++..+..
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~- 222 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNL- 222 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSC-
T ss_pred EecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCC-
Confidence 5 56688 999998864332 222 3345689999999998 556666 9999999995 998 888886643
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE--EEEecCCCCCCCCccccCCCCCCccccccc
Q 011970 356 HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC--LAKINATNCSPKVDDELGSSSTGKSKKLNK 433 (474)
Q Consensus 356 ~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c--l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~ 433 (474)
+..++|+|||++|+.++. .+++|.+||+.+|+. +.++..+-.. .
T Consensus 223 -----~~~~~~spdg~~l~v~~~----------~~~~i~~~d~~~~~~~~~~~~~~~~~~-~------------------ 268 (331)
T 3u4y_A 223 -----PGTIVVSRDGSTVYVLTE----------STVDVFNFNQLSGTLSFVKSFGHGLLI-D------------------ 268 (331)
T ss_dssp -----CCCEEECTTSSEEEEECS----------SEEEEEEEETTTTEEEEEEEEECCCCC-C------------------
T ss_pred -----CceEEECCCCCEEEEEEc----------CCCEEEEEECCCCceeeeccccccccc-C------------------
Confidence 478999999997766542 378899999999998 6666554210 0
Q ss_pred cccccccccccccCEEEEEEcCCCCEEEEE-cCCCcEEEccC
Q 011970 434 SSYIRSTVGEALEDITSLFYDEERNEIYTG-NRHGLVHVWSN 474 (474)
Q Consensus 434 ~~~~~~~~~~~l~~V~slafSpDg~~LaSg-s~DgtVklWd~ 474 (474)
++....+.+++|+|||+.|+.+ ..+++|++||.
T Consensus 269 --------~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 269 --------PRPLFGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp --------CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred --------CCCcccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 0001123568999999998655 45679999984
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.96 E-value=4e-28 Score=256.89 Aligned_cols=275 Identities=10% Similarity=-0.036 Sum_probs=201.0
Q ss_pred cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCC
Q 011970 118 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 197 (474)
Q Consensus 118 g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~n 197 (474)
.++++.+...+...|++|+|+|||+.||++|.. + .+++||++..|++. .+..+ +...+..++|| ||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~DG~~la~~s~~---~------g~~~lw~~~~g~~~---~lt~~-~~~~~~~~~~s-pd 75 (582)
T 3o4h_A 10 SRIVRDVERLIAVEKYSLQGVVDGDKLLVVGFS---E------GSVNAYLYDGGETV---KLNRE-PINSVLDPHYG-VG 75 (582)
T ss_dssp HHHHHHHHHHHHSCEEEEEEEETTTEEEEEEEE---T------TEEEEEEEETTEEE---ECCSS-CCSEECEECTT-CS
T ss_pred HHHHHHHHHHhccchheeecCCCCCeEEEEEcc---C------CceeEEEEcCCCcE---eeecc-cccccccccCC-CC
Confidence 344444443334579999999999999998742 3 57899998666642 12222 22345689998 78
Q ss_pred CeEEEEecC---CCcEEEeecCC---CeEEEEEc-CCcEEEEEEcCC--ceEEEEecCCCCccEEEEecCCCeEEEEEee
Q 011970 198 GKVLTYSAQ---DSIYKVFDLKN---YTMLYSIS-DKHVQEIKISPG--IMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 268 (474)
Q Consensus 198 Gk~LaS~s~---D~tiKlWdl~t---g~~l~tl~-~~~V~~vafSpg--~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~ 268 (474)
++|++++. +..++||.+.. |... .+. ...+...+|||+ ..++++. +.+. +.|||+++|++.+...+
T Consensus 76 -~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~--~~~~-~~l~d~~~g~~~~l~~~ 150 (582)
T 3o4h_A 76 -RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGA--TEDR-VALYALDGGGLRELARL 150 (582)
T ss_dssp -EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEE--CSSC-EEEEEEETTEEEEEEEE
T ss_pred -eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEec--CCCC-ceEEEccCCcEEEeecC
Confidence 88887765 66778876532 3333 333 233445567753 3344432 3344 44999999988766664
Q ss_pred cCcceeEEEEEecCCCeEEEEeCC----CcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CC--cEEEEeC
Q 011970 269 LLHRNKKVDFIEQFNEKLLVKQEN----ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NR--TVAVWNF 341 (474)
Q Consensus 269 h~~~v~~V~F~~~~~~~ll~~~~D----~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~--tIklWd~ 341 (474)
+. .+++|+ |+|.+|++++.| .+|.+||+.+|++. .+.+|...+..++|||||+.|+++. |+ +|.+||+
T Consensus 151 ~~---~~~~~s-pDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 151 PG---FGFVSD-IRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp SS---CEEEEE-EETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred CC---ceEEEC-CCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcC
Confidence 43 889998 678888877665 78999999999976 4577888899999999999999777 88 9999999
Q ss_pred C-CcEEEEeccCCCCcCCCCeeEEE--------ECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCC
Q 011970 342 R-GELVTSFEDHLLWHPDCNTNNIY--------ITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNC 412 (474)
Q Consensus 342 ~-G~ll~tl~gH~~~~~~~~v~sva--------fSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~ 412 (474)
+ |++. .+.+|... +.+++ |||||+++++++. |++++||++ |+++.++ ..
T Consensus 226 ~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~spdg~~~~~~~~-----------~g~~~l~~~--g~~~~~~---~~ 283 (582)
T 3o4h_A 226 RDGSVE-DLELPSKD-----FSSYRPTAITWLGYLPDGRLAVVARR-----------EGRSAVFID--GERVEAP---QG 283 (582)
T ss_dssp TTCCEE-ECCCSCSH-----HHHHCCSEEEEEEECTTSCEEEEEEE-----------TTEEEEEET--TEEECCC---SS
T ss_pred CCCcEE-EccCCCcC-----hhhhhhccccceeEcCCCcEEEEEEc-----------CCcEEEEEE--CCeeccC---CC
Confidence 6 7777 88888765 45667 9999999999887 999999998 8887622 22
Q ss_pred CCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCc---EEEcc
Q 011970 413 SPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGL---VHVWS 473 (474)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~Dgt---VklWd 473 (474)
.|.+++|| ||+.+++++.+.+ |.+||
T Consensus 284 ----------------------------------~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 284 ----------------------------------NHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp ----------------------------------EEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred ----------------------------------ceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 78899999 9999999998865 55655
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=5.1e-26 Score=219.02 Aligned_cols=276 Identities=9% Similarity=0.044 Sum_probs=192.4
Q ss_pred EEEEeeCCCeEEeeecc-cc--ceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEec--cCCCC
Q 011970 100 IVFALAHSGVCAAFSRE-TN--RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR--RGKPD 174 (474)
Q Consensus 100 ~las~s~dgtiklW~~~-tg--~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~--~G~~~ 174 (474)
++++.+.|++|++|++. +| +.+..+. +...+.+++|+|||+.|++++. ++ ..+.+|++. .|++.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~---~~------~~v~~~~~~~~~~~~~ 75 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGVR---PE------FRVLAYRIAPDDGALT 75 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEET---TT------TEEEEEEECTTTCCEE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEeec---CC------CeEEEEEecCCCCcee
Confidence 34444889999999985 45 4455554 4567899999999999988662 33 588999987 66642
Q ss_pred CccceeeeccccCceEEEEeCCCCeEEEEec-CCCcEEEeec---CCCeEEEEEcC-CcEEEEEEcCCc-eEEEEecCCC
Q 011970 175 SGFALFESESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDL---KNYTMLYSISD-KHVQEIKISPGI-MLLIFNRSSS 248 (474)
Q Consensus 175 ~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s-~D~tiKlWdl---~tg~~l~tl~~-~~V~~vafSpg~-~la~~s~~s~ 248 (474)
. ...+.. ...|..++|+ |||+.|+.++ .|++|++||+ .+++.+..+.. ..+.+++|+|++ .+++++ ..
T Consensus 76 ~-~~~~~~--~~~~~~~~~s-~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--~~ 149 (343)
T 1ri6_A 76 F-AAESAL--PGSLTHISTD-HQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPA--LK 149 (343)
T ss_dssp E-EEEEEC--SSCCSEEEEC-TTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEE--GG
T ss_pred e-cccccc--CCCCcEEEEc-CCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEec--CC
Confidence 1 011221 2256789998 7999775554 5899999999 44456666653 568999999854 566553 24
Q ss_pred CccEEEEecCC-CeEEE----EEee-cCcceeEEEEEecCCCeEEEEe-CCCcEEEEECC--CCce--EEe---cc-cc-
Q 011970 249 HVPLKILSIED-GTVLK----VFYH-LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR--NAEL--MEV---SR-TE- 312 (474)
Q Consensus 249 D~tIkLWdi~t-G~~L~----tl~~-h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~--tg~~--~~~---l~-~h- 312 (474)
++.|++||+.+ |+... .+.. .......++|+ |++..+++++ .+++|++||+. +++. ++. +. ++
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH-PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFS 228 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCC
T ss_pred CCEEEEEEecCCCceeeecccccccCCCCCcceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccc
Confidence 78999999998 86643 2332 23466789987 6677777765 89999999995 4554 222 22 11
Q ss_pred -CCceEEEEEcCCCcEEE-EEc-CCcEEEEeCC--C---cEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccc
Q 011970 313 -FMTPSAFIFLYENQLFL-TFR-NRTVAVWNFR--G---ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQ 384 (474)
Q Consensus 313 -~~~v~sv~Fspdg~lla-S~s-D~tIklWd~~--G---~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~ 384 (474)
...+..++|+|||+.|+ +.+ |++|++||++ + +.+..+..+.. +..++|+|||++|+.++.
T Consensus 229 ~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~~------ 296 (343)
T 1ri6_A 229 DTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ------PRGFNVDHSGKYLIAAGQ------ 296 (343)
T ss_dssp SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS------CCCEEECTTSSEEEEECT------
T ss_pred ccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc------cceEEECCCCCEEEEecC------
Confidence 34677899999998665 565 9999999995 2 34556665543 468999999999888763
Q ss_pred cccCCCCeEEEE--eCCCCe--EEEEecC
Q 011970 385 WMEGSAGSINVS--SILTGK--CLAKINA 409 (474)
Q Consensus 385 ~~~s~DgtIklW--di~tG~--cl~tl~g 409 (474)
.|++|.+| |..+|+ .+..+..
T Consensus 297 ----~~~~v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 297 ----KSHHISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp ----TTCEEEEEEEETTTTEEEEEEEEEC
T ss_pred ----CCCeEEEEEEcCCCceeeEcccccc
Confidence 38999999 555775 3455544
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=9.4e-27 Score=217.48 Aligned_cols=257 Identities=11% Similarity=0.037 Sum_probs=187.2
Q ss_pred eEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCC-CeEEEEEcC---CcEEEEEEcC
Q 011970 161 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN-YTMLYSISD---KHVQEIKISP 236 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~t-g~~l~tl~~---~~V~~vafSp 236 (474)
.++.+|++..|+.. .+..+ ...+..++|+ |||++|++++ |+.|++||+++ +++...... ..|.+++|||
T Consensus 22 ~~i~~~d~~~~~~~---~~~~~--~~~v~~~~~s-pdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 22 SSIEIFNIRTRKMR---VVWQT--PELFEAPNWS-PDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp EEEEEEETTTTEEE---EEEEE--SSCCEEEEEC-TTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred eeEEEEeCCCCcee---eeccC--CcceEeeEEC-CCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 79999999888762 23433 3567799998 7999999987 88999999999 887665542 4688999998
Q ss_pred CceEEEEecCCCCccEEEE--ecCCCeEEEEEeecCcceeEEEEEecCCCeEE-EEeCCCcEEEEEC--CCCceEEeccc
Q 011970 237 GIMLLIFNRSSSHVPLKIL--SIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLL-VKQENENLQILDV--RNAELMEVSRT 311 (474)
Q Consensus 237 g~~la~~s~~s~D~tIkLW--di~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll-~~~~D~tIkIWDv--~tg~~~~~l~~ 311 (474)
++..+.+.....+..++|| ++.+++ .+.+..+. .+..++|+ |++.+|+ +++.|++++||++ .+++. ..+..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~s-pdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 170 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWS-PDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTH 170 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEEC-TTSSEEEEEEEETTEEEEEEEETTTCCE-EECCC
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEEC-CCCCEEEEEECCCCceEEEEEECCCCcc-eEccc
Confidence 5544444332233445555 555655 45555443 47888987 6777787 4678999999995 44554 45566
Q ss_pred cCCceEEEEEcCCCcEEEEE-c-CCcEEEEeC--CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCcccccc
Q 011970 312 EFMTPSAFIFLYENQLFLTF-R-NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWME 387 (474)
Q Consensus 312 h~~~v~sv~Fspdg~llaS~-s-D~tIklWd~--~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~ 387 (474)
|...+..++|+|||+.|+.+ . |+.++||++ .++.+..+..|... +..++|+|||++|+.++..........
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG-----DWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE-----EEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc-----cCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 77889999999999977755 4 899999998 47788889888754 688999999999998875100000000
Q ss_pred CCCCeEEEEeCCCCeE--EEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcC
Q 011970 388 GSAGSINVSSILTGKC--LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR 465 (474)
Q Consensus 388 s~DgtIklWdi~tG~c--l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~ 465 (474)
..++.|.+||+.+|+. +..+.+|.. .|..++|+|||+.|++++.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQG----------------------------------TMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTT----------------------------------TSCSCCBCTTSSEEEEEEE
T ss_pred cCceEEEEEecCCCCceeeeccCCCCc----------------------------------ccccceECCCCCEEEEEEe
Confidence 0136799999998866 555557774 6788999999999998886
Q ss_pred CC
Q 011970 466 HG 467 (474)
Q Consensus 466 Dg 467 (474)
|.
T Consensus 292 ~~ 293 (297)
T 2ojh_A 292 FP 293 (297)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 145
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=258.44 Aligned_cols=313 Identities=11% Similarity=0.038 Sum_probs=215.7
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCc---eEEEEEEeeCCCEEEEEEeec-----CCCccceeeeEEEEeEec
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDE---VIRSLFYNKNNDSLITVSVYA-----SDNFSSLKCRSTKIEYIR 169 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~---~i~sv~fspdg~~Lis~S~~~-----s~d~s~Lk~~~~~iw~i~ 169 (474)
++++++ +.|+++++||..+|++...+.+ +.. .|.+++|||||+.|++++... +.+ .++++|++.
T Consensus 27 g~~~~~-~~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~------~~i~~~d~~ 98 (719)
T 1z68_A 27 QEYLHQ-SADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT------ATYYIYDLS 98 (719)
T ss_dssp SEEEEE-CTTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE------EEEEEEETT
T ss_pred CeEEEE-cCCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCCeEEEEecCceeEEeecc------eEEEEEECC
Confidence 655554 4699999999999999888775 323 389999999999999987532 123 689999999
Q ss_pred cCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-C--CcE-----------------
Q 011970 170 RGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-D--KHV----------------- 229 (474)
Q Consensus 170 ~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~--~~V----------------- 229 (474)
+|++....++ . ..+..++|| |||+.||+++ |++|++||+.+|++..... + ..|
T Consensus 99 ~g~~~~~~~l-~----~~~~~~~~S-PDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 99 NGEFVRGNEL-P----RPIQYLCWS-PVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp TTEECCSSCC-C----SSBCCEEEC-SSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred CCccccceec-C----cccccceEC-CCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 8886321122 1 235579998 7999999986 7899999999998764332 1 223
Q ss_pred EEEEEcCC-ceEEEEecCC-------------------------------CCccEEEEecCCCeEE--------EEEeec
Q 011970 230 QEIKISPG-IMLLIFNRSS-------------------------------SHVPLKILSIEDGTVL--------KVFYHL 269 (474)
Q Consensus 230 ~~vafSpg-~~la~~s~~s-------------------------------~D~tIkLWdi~tG~~L--------~tl~~h 269 (474)
.+++|||+ ..||+.+.+. ...+|++||+.+|+++ ..+.+|
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 48999985 4566554321 1227999999998863 223457
Q ss_pred CcceeEEEEEecCCCeEEEE-e--CC--CcEEEEE----CCCCceEEec----cccCCceE-----EEEEcCCCcEEE--
Q 011970 270 LHRNKKVDFIEQFNEKLLVK-Q--EN--ENLQILD----VRNAELMEVS----RTEFMTPS-----AFIFLYENQLFL-- 329 (474)
Q Consensus 270 ~~~v~~V~F~~~~~~~ll~~-~--~D--~tIkIWD----v~tg~~~~~l----~~h~~~v~-----sv~Fspdg~lla-- 329 (474)
...+..++|+ |+ +++++. . .+ ..|.+|| +.+|++..++ .+|..++. .++|||||+.|+
T Consensus 252 ~~~~~~~~~S-pD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 252 DYYFSWLTWV-TD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp CEEEEEEEES-SS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred cceEEEeEEe-CC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 7788999998 55 566654 2 22 3488899 9999988777 47777776 789999999554
Q ss_pred EEc-CC--cEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCC--CeE-
Q 011970 330 TFR-NR--TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT--GKC- 403 (474)
Q Consensus 330 S~s-D~--tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~t--G~c- 403 (474)
++. ++ .|.+||+.+...+.+..+... +..+.++ ||+.|+..+... +..+++++||.+.. |+.
T Consensus 330 ~~~~~g~~~l~~~~~~~~~~~~lt~~~~~-----v~~~~~~-d~~~i~~~~~~~------~~~~~~~~l~~~~~~~g~~~ 397 (719)
T 1z68_A 330 FSDKDGYKHIHYIKDTVENAIQITSGKWE-----AINIFRV-TQDSLFYSSNEF------EEYPGRRNIYRISIGSYPPS 397 (719)
T ss_dssp EECTTSCEEEEEESSCSTTCEECSCSSSC-----EEEEEEE-CSSEEEEEESCG------GGCTTCBEEEEEECSSSSCC
T ss_pred EEccCCceEEEEEECCCCceEecccCceE-----EEEEEEE-eCCEEEEEEecC------CCCCceEEEEEEeCCCCCCC
Confidence 343 55 677778864335677765432 6778888 888887665300 01158899998753 421
Q ss_pred EEEec----CCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEE-EEcCC--CcEEEcc
Q 011970 404 LAKIN----ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY-TGNRH--GLVHVWS 473 (474)
Q Consensus 404 l~tl~----gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~La-Sgs~D--gtVklWd 473 (474)
...|. +|.. .+..+.|||||+.|+ +++.+ .++.+||
T Consensus 398 ~~~l~~~~~~~~~----------------------------------~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d 440 (719)
T 1z68_A 398 KKCVTCHLRKERC----------------------------------QYYTASFSDYAKYYALVCYGPGIPISTLHD 440 (719)
T ss_dssp EEESSTTTTTTTB----------------------------------CBEEEEECGGGSSEEEEECCBSSCEEEEEC
T ss_pred ceeccCccCCCCC----------------------------------ceEEEEECCCCCEEEEEcCCCCCCeEEEEE
Confidence 23332 2432 678899999999877 44443 4567775
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=2.2e-25 Score=214.57 Aligned_cols=257 Identities=12% Similarity=0.112 Sum_probs=183.6
Q ss_pred eEEEEeEec-cCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCC-CcEEEeecC--CCe--EEEEEc-CCcEEEEE
Q 011970 161 RSTKIEYIR-RGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-SIYKVFDLK--NYT--MLYSIS-DKHVQEIK 233 (474)
Q Consensus 161 ~~~~iw~i~-~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D-~tiKlWdl~--tg~--~l~tl~-~~~V~~va 233 (474)
..+.+|++. .|+.. .+....+...|..++|+ |||++|++++.+ ++|++|++. +|+ .+.++. ...+..++
T Consensus 15 ~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (343)
T 1ri6_A 15 QQIHVWNLNHEGALT---LTQVVDVPGQVQPMVVS-PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHIS 90 (343)
T ss_dssp TEEEEEEECTTSCEE---EEEEEECSSCCCCEEEC-TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEE
T ss_pred CeEEEEEECCCCcEE---EeeeEecCCCCceEEEC-CCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEE
Confidence 589999984 45431 11111233456689998 799988888876 999999998 666 344554 34789999
Q ss_pred EcCCc-eEEEEecCCCCccEEEEec---CCCeEEEEEeecCcceeEEEEEecCCCeEEEEe-CCCcEEEEECCC-CceEE
Q 011970 234 ISPGI-MLLIFNRSSSHVPLKILSI---EDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRN-AELME 307 (474)
Q Consensus 234 fSpg~-~la~~s~~s~D~tIkLWdi---~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~t-g~~~~ 307 (474)
|+|++ .+++++ ..++.|++||+ .+++.+.++..+ ..+..++|+ |++..+++++ .|++|++||+.+ +++..
T Consensus 91 ~s~dg~~l~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 91 TDHQGQFVFVGS--YNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANIS-PDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp ECTTSSEEEEEE--TTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEEC-TTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred EcCCCCEEEEEe--cCCCeEEEEECCCCccccccccccCC-CCceEEEEC-CCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 99855 455553 34678999999 455666666654 457889987 6777888876 899999999998 76543
Q ss_pred e-----ccccCCceEEEEEcCCCcEE-EEEc-CCcEEEEeCC---CcE--EEEec----cCCCCcCCCCeeEEEECCCCC
Q 011970 308 V-----SRTEFMTPSAFIFLYENQLF-LTFR-NRTVAVWNFR---GEL--VTSFE----DHLLWHPDCNTNNIYITSDQD 371 (474)
Q Consensus 308 ~-----l~~h~~~v~sv~Fspdg~ll-aS~s-D~tIklWd~~---G~l--l~tl~----gH~~~~~~~~v~svafSpDg~ 371 (474)
. .......+..++|+|||+++ ++.. +++|++||++ |++ +..+. +|... ..+..++|+|||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~i~~s~dg~ 243 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT---RWAADIHITPDGR 243 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC---CCEEEEEECTTSS
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc---CCccceEECCCCC
Confidence 2 22234578899999999955 4555 9999999983 543 33333 21111 1256899999999
Q ss_pred EEEEEecCCCccccccCCCCeEEEEeCC--C--CeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccC
Q 011970 372 LIISYCKAEPEDQWMEGSAGSINVSSIL--T--GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALED 447 (474)
Q Consensus 372 ~LaS~s~~~~~~~~~~s~DgtIklWdi~--t--G~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 447 (474)
+|+.++. .|++|++||+. + .+.+..+..+. .
T Consensus 244 ~l~v~~~----------~~~~i~v~d~~~~~~~~~~~~~~~~~~-----------------------------------~ 278 (343)
T 1ri6_A 244 HLYACDR----------TASLITVFSVSEDGSVLSKEGFQPTET-----------------------------------Q 278 (343)
T ss_dssp EEEEEET----------TTTEEEEEEECTTSCCEEEEEEEECSS-----------------------------------S
T ss_pred EEEEEec----------CCCEEEEEEEcCCCCceEEeeeecCCC-----------------------------------c
Confidence 8875432 38999999997 3 35666665554 4
Q ss_pred EEEEEEcCCCCEEEEEc-CCCcEEEcc
Q 011970 448 ITSLFYDEERNEIYTGN-RHGLVHVWS 473 (474)
Q Consensus 448 V~slafSpDg~~LaSgs-~DgtVklWd 473 (474)
+.+++|+|||+.|+.++ .|++|++|+
T Consensus 279 ~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 279 PRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp CCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred cceEEECCCCCEEEEecCCCCeEEEEE
Confidence 66799999999988888 689999995
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.95 E-value=2.3e-26 Score=243.41 Aligned_cols=279 Identities=13% Similarity=0.060 Sum_probs=200.6
Q ss_pred cccEEEEEee--ccEEEEeeC-CCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 88 RTKVIEIVAA--RDIVFALAH-SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 88 ~~~V~~i~~s--~~~las~s~-dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
..+|..|+|+ |+.||.++. ||+++||++++|+.. .|..++...|++++|||| +.|++++..++++ ..+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~-------~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAE-------QHA 91 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSC-------CEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCc-------ceE
Confidence 4468888888 899999887 999999999766654 455545468999999999 7666654323333 345
Q ss_pred EeEec---cCCCCCccceeeeccccCceEEEEeCCCC--eEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcC-Cc
Q 011970 165 IEYIR---RGKPDSGFALFESESLKWPGFVEFDDVNG--KVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISP-GI 238 (474)
Q Consensus 165 iw~i~---~G~~~~~~~lf~~~~~~~~~~V~Fs~~nG--k~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSp-g~ 238 (474)
||.+. .|+.. .+.... .+...+|+ ||| .++++++.|+++ |||+++|++........ .+++||| |.
T Consensus 92 l~~~~~~~~g~~~---~l~~~~---~~~~~~~s-~dg~~~~~~s~~~~~~~-l~d~~~g~~~~l~~~~~-~~~~~spDG~ 162 (582)
T 3o4h_A 92 LFKVNTSRPGEEQ---RLEAVK---PMRILSGV-DTGEAVVFTGATEDRVA-LYALDGGGLRELARLPG-FGFVSDIRGD 162 (582)
T ss_dssp EEEEETTSTTCCE---ECTTSC---SBEEEEEE-ECSSCEEEEEECSSCEE-EEEEETTEEEEEEEESS-CEEEEEEETT
T ss_pred EEEEeccCCCccc---cccCCC---CceeeeeC-CCCCeEEEEecCCCCce-EEEccCCcEEEeecCCC-ceEEECCCCC
Confidence 55553 34321 122211 12234665 455 567777777766 99999998765444333 8999998 55
Q ss_pred eEEEEecCC-CCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCC--cEEEEECCCCceEEeccccCCc
Q 011970 239 MLLIFNRSS-SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENE--NLQILDVRNAELMEVSRTEFMT 315 (474)
Q Consensus 239 ~la~~s~~s-~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~--tIkIWDv~tg~~~~~l~~h~~~ 315 (474)
.||.++... ...+|++||+++|++. ++..|...+..++|+ |||..|+++..|+ +|.+||+.++++. ++.+|...
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~ 239 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASIS-PGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKD 239 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEEC-TTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSH
T ss_pred EEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceEC-CCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcC
Confidence 555443321 2267999999998865 778888889999998 7788888677888 9999999999998 88888888
Q ss_pred eEEEE--------EcCCCcEEEEEc-CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccc
Q 011970 316 PSAFI--------FLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWM 386 (474)
Q Consensus 316 v~sv~--------Fspdg~llaS~s-D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~ 386 (474)
+..++ |||||+++++++ |++++||++ |+++.++. .. |.+++|+ ||+++++++..
T Consensus 240 ~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-g~~~~~~~---~~-----v~~~~~s-dg~~l~~~s~~------- 302 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID-GERVEAPQ---GN-----HGRVVLW-RGKLVTSHTSL------- 302 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET-TEEECCCS---SE-----EEEEEEE-TTEEEEEEEET-------
T ss_pred hhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE-CCeeccCC---Cc-----eEEEEec-CCEEEEEEcCC-------
Confidence 88888 999999999998 999999999 98876433 22 6899999 99999998751
Q ss_pred cCCCCeEEEEeCCCCeEEEEe
Q 011970 387 EGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 387 ~s~DgtIklWdi~tG~cl~tl 407 (474)
..-..|.+||.. + .+..|
T Consensus 303 -~~p~~l~~~d~~-~-~~~~l 320 (582)
T 3o4h_A 303 -STPPRIVSLPSG-E-PLLEG 320 (582)
T ss_dssp -TEEEEEEEETTC-C-EEECC
T ss_pred -CCCCeEEEEcCC-C-ceEEE
Confidence 112447777754 3 44444
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=1.2e-25 Score=215.94 Aligned_cols=252 Identities=10% Similarity=0.083 Sum_probs=191.3
Q ss_pred eEEEEeEeccCCCCCccceeeecccc-CceEEEEeCCCCeE-EEEecCCCcEEEeecCCCeEEEEEc-CC------cEEE
Q 011970 161 RSTKIEYIRRGKPDSGFALFESESLK-WPGFVEFDDVNGKV-LTYSAQDSIYKVFDLKNYTMLYSIS-DK------HVQE 231 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~~~~~-~~~~V~Fs~~nGk~-LaS~s~D~tiKlWdl~tg~~l~tl~-~~------~V~~ 231 (474)
.++.+||+.+|+.... +...... .|..++|+ |||+. +++++.+++|.+||+.+++.+.++. .. .+..
T Consensus 11 ~~v~~~d~~~~~~~~~---~~~~~~~~~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKV---ITIADAGPTPMVPMVA-PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFG 86 (337)
T ss_dssp TEEEEEETTTTEEEEE---EECTTCTTCCCCEEEC-TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTC
T ss_pred CeEEEEECCCCcEEEE---EEcCCCCCCccceEEc-CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccc
Confidence 5899999988886332 2222111 36689998 79965 5677788999999999999887775 22 6778
Q ss_pred EEEcCCc-eEEEEecC------C---CCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECC
Q 011970 232 IKISPGI-MLLIFNRS------S---SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR 301 (474)
Q Consensus 232 vafSpg~-~la~~s~~------s---~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~ 301 (474)
++|+|++ .++++... . .++.|.+||+++|+.+..+.. ...+..++|+ |++.+++++ ++.|.+||+.
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s-~dg~~l~~~--~~~i~~~d~~ 162 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWA-RDGSKLYGL--GRDLHVMDPE 162 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEEC-TTSSCEEEE--SSSEEEEETT
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEEC-CCCCEEEEe--CCeEEEEECC
Confidence 9999855 66665311 0 358999999999999988874 3457788887 667777777 7899999999
Q ss_pred CCceEEeccccCCceEEEEEcCCCcEEEEEc--CC-----------------------cEEEEeCC-CcEE-EEeccCCC
Q 011970 302 NAELMEVSRTEFMTPSAFIFLYENQLFLTFR--NR-----------------------TVAVWNFR-GELV-TSFEDHLL 354 (474)
Q Consensus 302 tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s--D~-----------------------tIklWd~~-G~ll-~tl~gH~~ 354 (474)
+++++..+..+.. ...+.|+|||+.++... ++ +|.+||+. |++. ..+..|..
T Consensus 163 ~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 241 (337)
T 1pby_B 163 AGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV 241 (337)
T ss_dssp TTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSS
T ss_pred CCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCC
Confidence 9998876554331 11337899998665543 33 46899995 7764 23445543
Q ss_pred CcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccccccc
Q 011970 355 WHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKS 434 (474)
Q Consensus 355 ~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~ 434 (474)
. +.+++|+|||++|+.+ +++|.+||+.+++.+..+..+.
T Consensus 242 ~-----~~~~~~s~dg~~l~~~-------------~~~v~~~d~~~~~~~~~~~~~~----------------------- 280 (337)
T 1pby_B 242 F-----YFSTAVNPAKTRAFGA-------------YNVLESFDLEKNASIKRVPLPH----------------------- 280 (337)
T ss_dssp C-----EEEEEECTTSSEEEEE-------------ESEEEEEETTTTEEEEEEECSS-----------------------
T ss_pred c-----eeeEEECCCCCEEEEe-------------CCeEEEEECCCCcCcceecCCC-----------------------
Confidence 3 5789999999999975 6899999999999999887654
Q ss_pred ccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 435 SYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 435 ~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.+.+++|+|||+.|++++.|++|++||.
T Consensus 281 ------------~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 281 ------------SYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp ------------CCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred ------------ceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 5678999999999999999999999983
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=3.7e-25 Score=238.32 Aligned_cols=286 Identities=12% Similarity=0.142 Sum_probs=201.6
Q ss_pred ccEEEEEee-ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeE
Q 011970 89 TKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEY 167 (474)
Q Consensus 89 ~~V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~ 167 (474)
..|..+.|+ ...++.. .|+++++||+.+|+...... +...+.+++|||||+.|+++. + .++.+|+
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~--~~~~~~~~~~SpdG~~la~~~-----~------~~i~v~~ 147 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFD--TNEETASLDFSPVGDRVAYVR-----N------HNLYIAR 147 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEEC--CTTCCTTCEECTTSSEEEEEE-----T------TEEEEEE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccC--CcccccCCcCCCCCCEEEEEE-----C------CeEEEEe
Confidence 457888888 3333333 46999999999887765443 456689999999999998842 2 5899999
Q ss_pred ecc-----CCCCCccceeeec-------------cccCceEEEEeCCCCeEEEEec------------------------
Q 011970 168 IRR-----GKPDSGFALFESE-------------SLKWPGFVEFDDVNGKVLTYSA------------------------ 205 (474)
Q Consensus 168 i~~-----G~~~~~~~lf~~~-------------~~~~~~~V~Fs~~nGk~LaS~s------------------------ 205 (474)
+.. |+... +.... +..++..++|| |||+.||+++
T Consensus 148 ~~~~~~~~g~~~~---~~~~~~~~~~~g~~~~~ee~~~~~~~~~S-pDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 148 GGKLGEGMSRAIA---VTIDGTETLVYGQAVHQREFGIEKGTFWS-PKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp CBCTTSCCCCCEE---SCSCCBTTEEESSCCGGGCTTCCCSEEEC-TTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred cCcccccCCCcEE---eccCCCCCeEcccchhhhhcCCCceEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 988 77522 11111 12234689998 7999999998
Q ss_pred ---------CCCcEEEeecCCCeEEEEEc----CCcEEEEEEcCCc-eEEEEecC--CCCccEEEEecCCCeEEEEEe-e
Q 011970 206 ---------QDSIYKVFDLKNYTMLYSIS----DKHVQEIKISPGI-MLLIFNRS--SSHVPLKILSIEDGTVLKVFY-H 268 (474)
Q Consensus 206 ---------~D~tiKlWdl~tg~~l~tl~----~~~V~~vafSpg~-~la~~s~~--s~D~tIkLWdi~tG~~L~tl~-~ 268 (474)
.+.+|++||++++++..... ...|..++|||++ .|++.+.+ ..+.+|++||+++|+.++.+. .
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~ 303 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE 303 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred eCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc
Confidence 45789999999998755432 3569999999855 46654322 122489999999994444443 2
Q ss_pred -cCcc---eeEEEEEec--CCCeEEEEeCCCcEEEEECC-CCceEEeccccCCceEE-EEEcCCCcEEEEEc--CC----
Q 011970 269 -LLHR---NKKVDFIEQ--FNEKLLVKQENENLQILDVR-NAELMEVSRTEFMTPSA-FIFLYENQLFLTFR--NR---- 334 (474)
Q Consensus 269 -h~~~---v~~V~F~~~--~~~~ll~~~~D~tIkIWDv~-tg~~~~~l~~h~~~v~s-v~Fspdg~llaS~s--D~---- 334 (474)
+... +..++|+ | ++..+++++.|++++||++. +++.++.+..|...+.. ++|+|||+.|+.++ ++
T Consensus 304 ~~~~~~~~~~~~~~s-p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~ 382 (706)
T 2z3z_A 304 TDKHYVEPLHPLTFL-PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLER 382 (706)
T ss_dssp ECSSCCCCCSCCEEC-TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCB
T ss_pred cCCCeECccCCceee-cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceE
Confidence 2222 3568887 5 66666667789999999887 77888888888777876 79999998776554 44
Q ss_pred cEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEe
Q 011970 335 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 335 tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl 407 (474)
.|..||+.+..++.+. |... +.+++|||||++|+..+.+ ...-+.|.+||+.+|+ +..+
T Consensus 383 ~l~~~d~~~~~~~~l~-~~~~-----~~~~~~spdg~~l~~~~~~-------~~~p~~i~l~d~~~~~-~~~~ 441 (706)
T 2z3z_A 383 HFYCIDIKGGKTKDLT-PESG-----MHRTQLSPDGSAIIDIFQS-------PTVPRKVTVTNIGKGS-HTLL 441 (706)
T ss_dssp EEEEEETTCCCCEESC-CSSS-----EEEEEECTTSSEEEEEEEC-------SSCSCEEEEEESSSCE-EEEE
T ss_pred EEEEEEcCCCCceecc-CCCc-----eEEEEECCCCCEEEEEecC-------CCCCcEEEEEECCCCe-Eeec
Confidence 5666677533355555 4433 6899999999999877541 1123679999999888 4444
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=2.3e-25 Score=208.06 Aligned_cols=249 Identities=12% Similarity=0.018 Sum_probs=187.6
Q ss_pred EeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEecc-CCCCCccceee
Q 011970 103 ALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR-GKPDSGFALFE 181 (474)
Q Consensus 103 s~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~-G~~~~~~~lf~ 181 (474)
+.+.|+++++||..+|+...... |...|.+++|+|||+.|++++ + ..+.+|++.. |++.. ++.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~~----~-------~~i~~~d~~~~~~~~~---~~~ 80 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQ--TPELFEAPNWSPDGKYLLLNS----E-------GLLYRLSLAGDPSPEK---VDT 80 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEE--ESSCCEEEEECTTSSEEEEEE----T-------TEEEEEESSSCCSCEE---CCC
T ss_pred CCCcceeEEEEeCCCCceeeecc--CCcceEeeEECCCCCEEEEEc----C-------CeEEEEeCCCCCCceE---ecc
Confidence 45789999999999888775544 567899999999999998854 3 4789999988 87632 222
Q ss_pred eccccCceEEEEeCCCCeEEEEec--CCCcEEEeec--CCCeEEEEEc-CCcEEEEEEcCCc-eEEEEecCCCCccEEEE
Q 011970 182 SESLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDL--KNYTMLYSIS-DKHVQEIKISPGI-MLLIFNRSSSHVPLKIL 255 (474)
Q Consensus 182 ~~~~~~~~~V~Fs~~nGk~LaS~s--~D~tiKlWdl--~tg~~l~tl~-~~~V~~vafSpg~-~la~~s~~s~D~tIkLW 255 (474)
..+...+..++|+ |||+.|++++ .|+.++||.+ .+++ ...+. ...+..++|||++ .|+... +.|++++||
T Consensus 81 ~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~--~~~~~~~l~ 156 (297)
T 2ojh_A 81 GFATICNNDHGIS-PDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCG--IRDQVFDIY 156 (297)
T ss_dssp TTCCCBCSCCEEC-TTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEE--EETTEEEEE
T ss_pred ccccccccceEEC-CCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEE--CCCCceEEE
Confidence 2112345579998 7999999998 4456777765 4555 34443 4569999999855 455332 336789999
Q ss_pred ec--CCCeEEEEEeecCcceeEEEEEecCCCeEEEEe-CCCcEEEEECC-CCceEEeccccCCceEEEEEcCCCcEEEEE
Q 011970 256 SI--EDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR-NAELMEVSRTEFMTPSAFIFLYENQLFLTF 331 (474)
Q Consensus 256 di--~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~-tg~~~~~l~~h~~~v~sv~Fspdg~llaS~ 331 (474)
++ .+++ ...+..|...+..++|+ |++..+++++ .|+.++||++. .+..+..+..|...+..++|+|||++|+.+
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 157 SMDIDSGV-ETRLTHGEGRNDGPDYS-PDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp EEETTTCC-EEECCCSSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEE
T ss_pred EEECCCCc-ceEcccCCCccccceEC-CCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEE
Confidence 85 4554 45666677788999997 6777788765 69999999987 566777778888889999999999999888
Q ss_pred c-C-----------CcEEEEeCC-CcE--EEEeccCCCCcCCCCeeEEEECCCCCEEEEEec
Q 011970 332 R-N-----------RTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 332 s-D-----------~tIklWd~~-G~l--l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
+ | +.|.+||++ |+. +..+.+|... +..++|+|||++|++++.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGT-----MNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTT-----SCSCCBCTTSSEEEEEEE
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcc-----cccceECCCCCEEEEEEe
Confidence 7 5 569999996 665 5556688765 578999999999999875
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=5.2e-24 Score=206.77 Aligned_cols=267 Identities=14% Similarity=0.141 Sum_probs=204.5
Q ss_pred cccEEEEEee--ccEEEEeeC-------CCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccce
Q 011970 88 RTKVIEIVAA--RDIVFALAH-------SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSL 158 (474)
Q Consensus 88 ~~~V~~i~~s--~~~las~s~-------dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~L 158 (474)
...+.+++++ ++.|++++. ++++.+||..+++.+.++.. . ..+.+++|+|||+.|+.++ ..+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~v~~---~~~---- 110 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-D-LKPFGATINNTTQTLWFGN---TVN---- 110 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-S-SCCCSEEEETTTTEEEEEE---TTT----
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-C-CCcceEEECCCCCEEEEEe---cCC----
Confidence 3456788888 677777773 67999999999999999875 2 3478999999999776544 234
Q ss_pred eeeEEEEeEeccCCCCCccceeeec-----cccCceEEEEeCCCCeEEEEec--CCCcEEEeecCCCeEEEEEc--CCcE
Q 011970 159 KCRSTKIEYIRRGKPDSGFALFESE-----SLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTMLYSIS--DKHV 229 (474)
Q Consensus 159 k~~~~~iw~i~~G~~~~~~~lf~~~-----~~~~~~~V~Fs~~nGk~LaS~s--~D~tiKlWdl~tg~~l~tl~--~~~V 229 (474)
..+.+||+.+|+....+++-... ...++..++|+ |||+.|..++ .+++|.+||+++++.+..+. +..+
T Consensus 111 --~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 187 (353)
T 3vgz_A 111 --SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVAD-DATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS 187 (353)
T ss_dssp --TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEE-TTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTC
T ss_pred --CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEEC-CCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCcc
Confidence 58899999999874432221100 01125679998 7888666554 58999999999999998886 4568
Q ss_pred EEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEee----cCcceeEEEEEecCCCeEEEEe-CCCcEEEEECCCC
Q 011970 230 QEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH----LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNA 303 (474)
Q Consensus 230 ~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~----h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~tg 303 (474)
..++|+| |..++++ +.++.|.+||+++|+.+.++.. +.+....++|+ |+++.++++. .++.|.+||+.++
T Consensus 188 ~~~~~s~dg~~l~~~---~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 188 TGLALDSEGKRLYTT---NADGELITIDTADNKILSRKKLLDDGKEHFFINISLD-TARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp CCCEEETTTTEEEEE---CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE-TTTTEEEEEESSSSEEEEEETTTC
T ss_pred ceEEECCCCCEEEEE---cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC-CCCCEEEEEeCCCCEEEEEECCCC
Confidence 8999998 4556655 3368999999999999998874 45567789998 6778787765 5699999999999
Q ss_pred ceEEeccccCCceEEEEEcCCCc-EEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEec
Q 011970 304 ELMEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 304 ~~~~~l~~h~~~v~sv~Fspdg~-llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
+.+..+..+. ...++|+|||+ ++++.. +++|.+||.. |+.+.++..+.. ...++|+|||++|+.++.
T Consensus 264 ~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 264 NILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTH------PNSLALSADGKTLYVSVK 333 (353)
T ss_dssp CEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSE------EEEEEECTTSCEEEEEEE
T ss_pred cEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCC------CCeEEEcCCCCEEEEEEc
Confidence 9887755433 35789999998 556665 9999999995 999998876543 589999999997776655
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=2.7e-24 Score=210.99 Aligned_cols=261 Identities=11% Similarity=0.142 Sum_probs=175.9
Q ss_pred eEEEEeEe--ccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecC--CCcEEEeecCCCe--EEEEE--cCCcEEEE
Q 011970 161 RSTKIEYI--RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYT--MLYSI--SDKHVQEI 232 (474)
Q Consensus 161 ~~~~iw~i--~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~--D~tiKlWdl~tg~--~l~tl--~~~~V~~v 232 (474)
+.+.+|.+ .+|++.. .... .+...|..++|+ |||++++++.. |++|++||+.+|+ .+.++ ....+..|
T Consensus 16 ~~i~v~~~d~~tg~~~~-~~~~--~~~~~p~~~a~s-pdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTN-DGLL--AATQNPTYLALS-AKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp CEEEEEEEETTTTEEEE-EEEE--EECSCCCCEEEC-TTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred CCEEEEEEcCCCCeEEE-eeee--eccCCcceEEEc-cCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 56666666 4565421 0111 234567789998 79994444432 7899999998887 34443 35678899
Q ss_pred EEcCCc-eEEEEecCCCCccEEEEecC-CCe--EEEEEeec---------CcceeEEEEEecCCCeEEEE-eCCCcEEEE
Q 011970 233 KISPGI-MLLIFNRSSSHVPLKILSIE-DGT--VLKVFYHL---------LHRNKKVDFIEQFNEKLLVK-QENENLQIL 298 (474)
Q Consensus 233 afSpg~-~la~~s~~s~D~tIkLWdi~-tG~--~L~tl~~h---------~~~v~~V~F~~~~~~~ll~~-~~D~tIkIW 298 (474)
+|||++ +|++++ ..+++|++|++. +|+ .+..+... ...+..++|+ |++. ++++ ..+++|++|
T Consensus 92 a~spdg~~l~~~~--~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~s-pdg~-l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 92 AVDEARQLVYSAN--YHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLT-PDNR-LAVIDLGSDKVYVY 167 (347)
T ss_dssp EEETTTTEEEEEE--TTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEEC-TTSC-EEEEETTTTEEEEE
T ss_pred EECCCCCEEEEEe--CCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEEC-CCCc-EEEEeCCCCEEEEE
Confidence 999854 566654 346899999995 443 34444321 1246789997 5666 6665 578999999
Q ss_pred ECC-CCceEEe--cc-ccCCceEEEEEcCCCcEEEE-Ec-CCcEEEEeCC---CcE--EEEeccCCCC-cCCCCeeEEEE
Q 011970 299 DVR-NAELMEV--SR-TEFMTPSAFIFLYENQLFLT-FR-NRTVAVWNFR---GEL--VTSFEDHLLW-HPDCNTNNIYI 366 (474)
Q Consensus 299 Dv~-tg~~~~~--l~-~h~~~v~sv~Fspdg~llaS-~s-D~tIklWd~~---G~l--l~tl~gH~~~-~~~~~v~svaf 366 (474)
|+. +|++... .. .....+..++|+|||++|+. .. +++|.+|+++ |++ +..+..+..- .....+..++|
T Consensus 168 ~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (347)
T 3hfq_A 168 NVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRL 247 (347)
T ss_dssp EECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEE
T ss_pred EECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEE
Confidence 999 6765432 12 22346888999999995544 55 8999999984 553 3344433210 00012578999
Q ss_pred CCCCCEEEEEecCCCccccccCCCCeEEEEeCC-CC--eEEEEecCCCCCCCCccccCCCCCCccccccccccccccccc
Q 011970 367 TSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL-TG--KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGE 443 (474)
Q Consensus 367 SpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~-tG--~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (474)
+|||++|+..+. .+++|.+||+. +| +.+.++..|..
T Consensus 248 spdG~~l~v~~~----------~~~~v~v~~~~~~g~~~~~~~~~~~~~------------------------------- 286 (347)
T 3hfq_A 248 SHDGHFLYVSNR----------GYNTLAVFAVTADGHLTLIQQISTEGD------------------------------- 286 (347)
T ss_dssp CTTSCEEEEEEE----------TTTEEEEEEECGGGCEEEEEEEECSSS-------------------------------
T ss_pred CCCCCEEEEEeC----------CCCEEEEEEECCCCcEEEeEEEecCCC-------------------------------
Confidence 999998844332 28999999996 33 66777776653
Q ss_pred cccCEEEEEEcCCCCEEEEEcCC-CcEEEcc
Q 011970 444 ALEDITSLFYDEERNEIYTGNRH-GLVHVWS 473 (474)
Q Consensus 444 ~l~~V~slafSpDg~~LaSgs~D-gtVklWd 473 (474)
.+.+++|||||+.||+++.+ ++|.+|+
T Consensus 287 ---~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 287 ---FPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp ---CCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ---CcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 56789999999999888765 8999994
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=4.9e-24 Score=209.18 Aligned_cols=269 Identities=11% Similarity=0.125 Sum_probs=186.7
Q ss_pred CCCeEEeeecc--ccceee-EeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceee-
Q 011970 106 HSGVCAAFSRE--TNRRIC-FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE- 181 (474)
Q Consensus 106 ~dgtiklW~~~--tg~~l~-~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~- 181 (474)
.++.+.+|.++ +|+... .... +......++|+|||+ |++++..+ .+ ..+.+|++..|++.. +-.
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~-~~~~p~~~a~spdg~-l~~~~~~~-~~------~~v~~~~~~~g~~~~---~~~~ 81 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLA-ATQNPTYLALSAKDC-LYSVDKED-DE------GGIAAWQIDGQTAHK---LNTV 81 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEE-ECSCCCCEEECTTCE-EEEEEEET-TE------EEEEEEEEETTEEEE---EEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeee-ccCCcceEEEccCCe-EEEEEecC-CC------ceEEEEEecCCcEEE---eeee
Confidence 45667777654 566533 2222 335577899999999 76665432 34 689999997776411 111
Q ss_pred eccccCceEEEEeCCCCeEEEEec-CCCcEEEeecC-CCe--EEEEEcC-----------CcEEEEEEcCCceEEEEecC
Q 011970 182 SESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLK-NYT--MLYSISD-----------KHVQEIKISPGIMLLIFNRS 246 (474)
Q Consensus 182 ~~~~~~~~~V~Fs~~nGk~LaS~s-~D~tiKlWdl~-tg~--~l~tl~~-----------~~V~~vafSpg~~la~~s~~ 246 (474)
..+...|..|+|+ |||++|++++ .|++|++||+. +|+ .+..+.. ..+..++|+|++.++++.
T Consensus 82 ~~~~~~p~~~a~s-pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~-- 158 (347)
T 3hfq_A 82 VAPGTPPAYVAVD-EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVID-- 158 (347)
T ss_dssp EEESCCCSEEEEE-TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEE--
T ss_pred ecCCCCCEEEEEC-CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEe--
Confidence 1134567789998 7999888777 78999999995 444 3444421 248899999966666553
Q ss_pred CCCccEEEEecC-CCeEEE--EEeec-CcceeEEEEEecCCCeEEEE-eCCCcEEEEECCC--CceE--EeccccC----
Q 011970 247 SSHVPLKILSIE-DGTVLK--VFYHL-LHRNKKVDFIEQFNEKLLVK-QENENLQILDVRN--AELM--EVSRTEF---- 313 (474)
Q Consensus 247 s~D~tIkLWdi~-tG~~L~--tl~~h-~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~t--g~~~--~~l~~h~---- 313 (474)
..+..|++|++. +|++.. .+..+ ......++|+ |++.++++. ..+++|++||+.. +++. .......
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS-PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYT 237 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCC
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCC
Confidence 446789999998 776543 23322 2356779997 677767775 5789999999874 6643 2222221
Q ss_pred --CceEEEEEcCCCcEE-EEEc-CCcEEEEeCC--C--cEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCcccc
Q 011970 314 --MTPSAFIFLYENQLF-LTFR-NRTVAVWNFR--G--ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQW 385 (474)
Q Consensus 314 --~~v~sv~Fspdg~ll-aS~s-D~tIklWd~~--G--~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~ 385 (474)
..+..++|+|||++| ++.. +++|.+||++ | +.+.++..|... +..++|+|||++|+.++.
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~-----~~~~~~spdg~~l~v~~~------- 305 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDF-----PRDFDLDPTEAFVVVVNQ------- 305 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSC-----CCEEEECTTSSEEEEEET-------
T ss_pred CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCC-----cCeEEECCCCCEEEEEEc-------
Confidence 458899999999966 5666 8999999985 5 456677776554 478999999999988764
Q ss_pred ccCCCCeEEEE--eCCCCeEEE
Q 011970 386 MEGSAGSINVS--SILTGKCLA 405 (474)
Q Consensus 386 ~~s~DgtIklW--di~tG~cl~ 405 (474)
.+++|.+| |..+|+...
T Consensus 306 ---~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 306 ---NTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp ---TTTEEEEEEECTTTCCEEE
T ss_pred ---CCCcEEEEEEeCCCCeEEe
Confidence 26899999 667888653
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=9.7e-25 Score=211.10 Aligned_cols=279 Identities=6% Similarity=-0.068 Sum_probs=194.6
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCcc
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~ 177 (474)
+.++++++.+++|++||..+|+.+.++.......+.+++|+|||+.|+.++ ..+ .++.+|++.+|+....+
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---~~~------~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---NHY------GDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE---TTT------TEEEEEETTTTEEEEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe---CCC------CcEEEEeCCCCcEEEEE
Confidence 788999999999999999999999999863322578999999999776543 244 58999999888863321
Q ss_pred ceeee--ccccCceEEEEeCCCCeEEEEecCC------------CcEEEeecCCCe---EEEEEc-CCcEEEEEEcCCce
Q 011970 178 ALFES--ESLKWPGFVEFDDVNGKVLTYSAQD------------SIYKVFDLKNYT---MLYSIS-DKHVQEIKISPGIM 239 (474)
Q Consensus 178 ~lf~~--~~~~~~~~V~Fs~~nGk~LaS~s~D------------~tiKlWdl~tg~---~l~tl~-~~~V~~vafSpg~~ 239 (474)
.+-.. .....+..++|+ |||++|+.++.| ++|.+||+++++ .+..+. ...+.+++|+|++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAIS-PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp ESCCSTTEEEECSSCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred EcccccccccccccceEEC-CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 11000 001235689998 799999988865 999999999854 334443 34688999999766
Q ss_pred EEEEecCCCCccEEEEecCCCeEEEEEeecCc------------------------ceeEEEEEecCCCeEEEE-eCCCc
Q 011970 240 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH------------------------RNKKVDFIEQFNEKLLVK-QENEN 294 (474)
Q Consensus 240 la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~------------------------~v~~V~F~~~~~~~ll~~-~~D~t 294 (474)
+++. + ..|++||+++|+++.++..+.. ....++|.+ ++...... .....
T Consensus 161 l~~~---~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 161 LYVA---G--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK-DDKQDPATADLLYG 234 (349)
T ss_dssp EEEE---S--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--------CCCEEEEE
T ss_pred EEEc---c--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC-CCcCCcccccccee
Confidence 5553 2 3499999999999998874310 123344431 11000000 00111
Q ss_pred EEEEECCCCceEEe-ccccCCceEEEEEcC-CCcEEEEEcCCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCC
Q 011970 295 LQILDVRNAELMEV-SRTEFMTPSAFIFLY-ENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD 371 (474)
Q Consensus 295 IkIWDv~tg~~~~~-l~~h~~~v~sv~Fsp-dg~llaS~sD~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~ 371 (474)
+-.+|..+++.... +..+...+..++|+| ||++++++ +++|.+||+. |+++.++..+.. +..++|+|||+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~ 307 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHT------YYCVAFDKKGD 307 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSC------CCEEEECSSSS
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCC------ccceEECCCCC
Confidence 12244444443211 223556788999999 99999988 8999999995 999888874432 46899999999
Q ss_pred EEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 372 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 372 ~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
+|++++. +++|++||+.+++.+.+++.+
T Consensus 308 ~l~~~~~-----------~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 308 KLYLGGT-----------FNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp CEEEESB-----------SSEEEEEETTTTEEEEEEECS
T ss_pred EEEEecC-----------CCeEEEEeccccceeeeeecC
Confidence 8888654 899999999999999998765
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.94 E-value=1.3e-24 Score=215.13 Aligned_cols=320 Identities=10% Similarity=0.043 Sum_probs=204.7
Q ss_pred eeeccccceeeEeecCCCceEEE-----EEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeecccc
Q 011970 112 AFSRETNRRICFLNVSPDEVIRS-----LFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLK 186 (474)
Q Consensus 112 lW~~~tg~~l~~l~g~~~~~i~s-----v~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~ 186 (474)
.++..+|..+..|.. +.....+ .+|||||+.|+.++... .. ..+.+|++..|+... +... +..
T Consensus 14 ~~~~~~g~~~~~lt~-~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-g~------~~l~~~d~~~g~~~~---lt~~-~~~ 81 (388)
T 3pe7_A 14 YQDASTGAQVTRLTP-PDVTCHRNYFYQKCFTRDGSKLLFGGAFD-GP------WNYYLLDLNTQVATQ---LTEG-RGD 81 (388)
T ss_dssp EECTTTCCEEEECSC-TTSCEECCCTTSCCBCTTSCEEEEEECTT-SS------CEEEEEETTTCEEEE---CCCS-SCB
T ss_pred EecCCCCcceEEecC-CcccccchhhcCccCCCCCCEEEEEEcCC-CC------ceEEEEeCCCCceEE---eeeC-CCC
Confidence 456778999999986 4445666 88999999999987421 11 357778888887622 2221 222
Q ss_pred CceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEE--EEcCCcEEEEE--EcCCceEEEEec-----------------
Q 011970 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--SISDKHVQEIK--ISPGIMLLIFNR----------------- 245 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~--tl~~~~V~~va--fSpg~~la~~s~----------------- 245 (474)
.+..++|| |||+.|++++.|+++.+||+.+++... .++...+.... ++|++.++++..
T Consensus 82 ~~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 82 NTFGGFLS-PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp CSSSCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred CccceEEc-CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhh
Confidence 22256898 799999999999999999999998654 44455554443 477555544211
Q ss_pred ---CCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeC------CCcEEEEECCCCceEEeccccC-Cc
Q 011970 246 ---SSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQE------NENLQILDVRNAELMEVSRTEF-MT 315 (474)
Q Consensus 246 ---~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~------D~tIkIWDv~tg~~~~~l~~h~-~~ 315 (474)
.+.+..|.+||+++|+..... .+...+..++|+|.++.+|+..+. +..|.++|+.+++......++. ..
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (388)
T 3pe7_A 161 FYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGES 239 (388)
T ss_dssp HGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEE
T ss_pred hhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcc
Confidence 233468999999999865544 445678899998327778877654 3478888887776655544332 35
Q ss_pred eEEEEEcCCCcEEEEEc--CC----cEEEEeCC-Cc--EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccc
Q 011970 316 PSAFIFLYENQLFLTFR--NR----TVAVWNFR-GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWM 386 (474)
Q Consensus 316 v~sv~Fspdg~llaS~s--D~----tIklWd~~-G~--ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~ 386 (474)
+..++|||||+.|+..+ ++ +|.+||+. |+ .+..+.++..... ....++|||||+.|+..... .....
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~--~~~~~ 315 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMS--NYDGSLMVGDGSDAPVDVQD--DSGYK 315 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEE--CTTSSEEEEEECCC-------------
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeee--cCCCCeEccCCCcceeEeee--ccccc
Confidence 77889999999776544 22 39999995 76 4555555221100 01234799999998854210 00000
Q ss_pred cCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEc-C
Q 011970 387 EGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN-R 465 (474)
Q Consensus 387 ~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs-~ 465 (474)
.+.+..|.+||+.+|+. ..|..|........ ......+.+++|||||+.|+.++ .
T Consensus 316 ~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~-----------------------~~~~~~~~~~~~spDg~~l~~~s~~ 371 (388)
T 3pe7_A 316 IENDPFLYVFNMKNGTQ-HRVARHDTSWKVFE-----------------------GDRQVTHPHPSFTPDDKQILFTSDV 371 (388)
T ss_dssp -CCCCEEEEEETTTTEE-EEEEECCCCCCCBT-----------------------TBSSTTCCCCEECTTSSEEEEEECT
T ss_pred cCCCCEEEEEeccCCce-EEeccccCcccccc-----------------------cccccCCCCccCCCCCCEEEEEecC
Confidence 13378999999988775 55666652000000 00001366789999999888665 6
Q ss_pred CCcEEEcc
Q 011970 466 HGLVHVWS 473 (474)
Q Consensus 466 DgtVklWd 473 (474)
+|..+||.
T Consensus 372 ~g~~~l~~ 379 (388)
T 3pe7_A 372 HGKPALYL 379 (388)
T ss_dssp TSSCEEEE
T ss_pred CCceeEEE
Confidence 88888884
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=3.2e-26 Score=247.52 Aligned_cols=276 Identities=10% Similarity=0.116 Sum_probs=197.3
Q ss_pred EEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccc--cCceEEEEeCCCCeEEEEecC----
Q 011970 133 RSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESL--KWPGFVEFDDVNGKVLTYSAQ---- 206 (474)
Q Consensus 133 ~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~--~~~~~V~Fs~~nGk~LaS~s~---- 206 (474)
.++.|+|||+.+++ + .| .++++|++..|++. .++..... ..+..++|| |||+.||+++.
T Consensus 19 ~~~~~s~dg~~~~~-~----~d------~~i~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~S-pDg~~la~~~~~~~~ 83 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-S----AD------NNIVLYNIETGQSY---TILSNRTMKSVNASNYGLS-PDRQFVYLESDYSKL 83 (719)
T ss_dssp CCCEESSSSEEEEE-C----TT------SCEEEEESSSCCEE---EEECHHHHHTTTCSEEEEC-TTSSEEEEEEEEEEC
T ss_pred CccEECCCCeEEEE-c----CC------CCEEEEEcCCCcEE---EEEccccccccceeeEEEC-CCCCeEEEEecCcee
Confidence 47899999975544 2 34 58999999999862 23433111 125689998 79999999886
Q ss_pred -----CCcEEEeecCCCeEE--EEEcCCcEEEEEEcCCc-eEEEEecCCCCccEEEEecCCCeEEEEE-eecCcce----
Q 011970 207 -----DSIYKVFDLKNYTML--YSISDKHVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTVLKVF-YHLLHRN---- 273 (474)
Q Consensus 207 -----D~tiKlWdl~tg~~l--~tl~~~~V~~vafSpg~-~la~~s~~s~D~tIkLWdi~tG~~L~tl-~~h~~~v---- 273 (474)
|++|++||+++|+++ ..+ ...+..++|||++ .||.. . |++|++||+.+|++.+.. .++...+
T Consensus 84 ~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~-~---~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~ 158 (719)
T 1z68_A 84 WRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYV-Y---QNNIYLKQRPGDPPFQITFNGRENKIFNGI 158 (719)
T ss_dssp SSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEE-E---TTEEEEESSTTSCCEECCCCCBTTTEEESS
T ss_pred EEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEE-E---CCeEEEEeCCCCCcEEEecCCCcCCeEccc
Confidence 799999999999874 233 2568899999855 55544 2 579999999999886533 2332222
Q ss_pred -------------eEEEEEecCCCeEEEEeCCC----------------------------------cEEEEECCCCceE
Q 011970 274 -------------KKVDFIEQFNEKLLVKQENE----------------------------------NLQILDVRNAELM 306 (474)
Q Consensus 274 -------------~~V~F~~~~~~~ll~~~~D~----------------------------------tIkIWDv~tg~~~ 306 (474)
..++|+ |+|.+|+.++.|. +|++||+.+++++
T Consensus 159 ~~~v~~ee~~~~~~~~~wS-PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~ 237 (719)
T 1z68_A 159 PDWVYEEEMLATKYALWWS-PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV 237 (719)
T ss_dssp CCHHHHHHTTCSSCCEEEC-TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH
T ss_pred ccceeeeecccCcccEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc
Confidence 489997 7888898877542 8899999999863
Q ss_pred ---Ee-----ccccCCceEEEEEcCCCcEEEEEc-C----CcEEEEe----CC-CcEEEEe----ccCCCCcCCCCeeEE
Q 011970 307 ---EV-----SRTEFMTPSAFIFLYENQLFLTFR-N----RTVAVWN----FR-GELVTSF----EDHLLWHPDCNTNNI 364 (474)
Q Consensus 307 ---~~-----l~~h~~~v~sv~Fspdg~llaS~s-D----~tIklWd----~~-G~ll~tl----~gH~~~~~~~~v~sv 364 (474)
++ +.+|...+.+++|||||+++++.. . ..|.+|| .. |++...+ ++|..|+.......+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (719)
T 1z68_A 238 GPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTP 317 (719)
T ss_dssp CCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCC
T ss_pred ceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCcc
Confidence 32 346888899999999999888854 2 2488899 84 7777666 588887410000178
Q ss_pred EECCCCCEEEEE-ecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccc
Q 011970 365 YITSDQDLIISY-CKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGE 443 (474)
Q Consensus 365 afSpDg~~LaS~-s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (474)
+|||||+.|+.. +. .+....|.+||+.+|+ ...|..+..
T Consensus 318 ~~spdg~~l~~~~~~--------~~g~~~l~~~~~~~~~-~~~lt~~~~------------------------------- 357 (719)
T 1z68_A 318 VFSYDAISYYKIFSD--------KDGYKHIHYIKDTVEN-AIQITSGKW------------------------------- 357 (719)
T ss_dssp EECTTSSCEEEEEEC--------TTSCEEEEEESSCSTT-CEECSCSSS-------------------------------
T ss_pred EECCCCCeEEEEEEc--------cCCceEEEEEECCCCc-eEecccCce-------------------------------
Confidence 999999976542 21 1124478888987777 566766553
Q ss_pred cccCEEEEEEcCCCCEEEEEcCC-----CcEEEcc
Q 011970 444 ALEDITSLFYDEERNEIYTGNRH-----GLVHVWS 473 (474)
Q Consensus 444 ~l~~V~slafSpDg~~LaSgs~D-----gtVklWd 473 (474)
.|..+.|+ ||+.|+..+.+ ++++||.
T Consensus 358 ---~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 358 ---EAINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp ---CEEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred ---EEEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 67888888 88887766654 8899996
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=2.2e-24 Score=208.58 Aligned_cols=229 Identities=7% Similarity=0.029 Sum_probs=177.8
Q ss_pred EEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC-C--cEEEEEEcCCc-eEEEEecCCCCccEEEEecCCCeEEEEE
Q 011970 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-K--HVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (474)
Q Consensus 191 V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~-~--~V~~vafSpg~-~la~~s~~s~D~tIkLWdi~tG~~L~tl 266 (474)
++|+ ++++++++++.|++|++||+++++++.++.. . .+..++|+|++ .++++. ..++.|.+||+++|+.+.++
T Consensus 5 ~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~--~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 5 PALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN--NHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE--TTTTEEEEEETTTTEEEEEE
T ss_pred cccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe--CCCCcEEEEeCCCCcEEEEE
Confidence 5676 7999999999999999999999999888863 3 58899999865 455553 44689999999999999888
Q ss_pred eecC------cceeEEEEEecCCCeEEEEeCC------------CcEEEEECCCCceE---EeccccCCceEEEEEcCCC
Q 011970 267 YHLL------HRNKKVDFIEQFNEKLLVKQEN------------ENLQILDVRNAELM---EVSRTEFMTPSAFIFLYEN 325 (474)
Q Consensus 267 ~~h~------~~v~~V~F~~~~~~~ll~~~~D------------~tIkIWDv~tg~~~---~~l~~h~~~v~sv~Fspdg 325 (474)
..+. ..+..++|+ |++.++++++.+ ++|.+||+.+++.. .....+ ..+.+++|+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg 159 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAIS-PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDG 159 (349)
T ss_dssp ESCCSTTEEEECSSCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTS
T ss_pred EcccccccccccccceEEC-CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCC
Confidence 7321 226788987 678888887754 99999999996543 333333 368889999999
Q ss_pred cEEEEEcCCcEEEEeCC-CcEEEEeccCCCCcC-----------------------------------------------
Q 011970 326 QLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHP----------------------------------------------- 357 (474)
Q Consensus 326 ~llaS~sD~tIklWd~~-G~ll~tl~gH~~~~~----------------------------------------------- 357 (474)
++++ ++ +.|.+||.. |+++.++..+....+
T Consensus 160 ~l~~-~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 160 SLYV-AG-PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp CEEE-ES-SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred cEEE-cc-CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 9555 43 349999994 999888765420000
Q ss_pred ----------------CCCeeEEEECC-CCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccc
Q 011970 358 ----------------DCNTNNIYITS-DQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDEL 420 (474)
Q Consensus 358 ----------------~~~v~svafSp-Dg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~ 420 (474)
...+.+++|+| ||++|+.+ ++.|.+||+.+|+.++++..+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-------------~~~v~~~d~~~~~~~~~~~~~~--------- 295 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-------------LNRLAKYDLKQRKLIKAANLDH--------- 295 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-------------ESEEEEEETTTTEEEEEEECSS---------
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-------------cCeEEEEECccCeEEEEEcCCC---------
Confidence 00235677889 99999875 5799999999999999886543
Q ss_pred CCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 421 GSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
.+++++|+|||+.|++++.+++|++||.
T Consensus 296 --------------------------~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 296 --------------------------TYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp --------------------------CCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred --------------------------CccceEECCCCCEEEEecCCCeEEEEec
Confidence 4668999999999999999999999983
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=1.6e-22 Score=199.81 Aligned_cols=257 Identities=11% Similarity=0.147 Sum_probs=177.7
Q ss_pred eEEEEeEe--ccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCC----CcEEEeecCC--CeE--EEEEc--CCc
Q 011970 161 RSTKIEYI--RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKN--YTM--LYSIS--DKH 228 (474)
Q Consensus 161 ~~~~iw~i--~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D----~tiKlWdl~t--g~~--l~tl~--~~~ 228 (474)
..+.+|.+ .+|++.. +... +...|..++|+ |||++|++++.| ++|.+|++.. |++ +.++. ...
T Consensus 27 ~~i~~~~~d~~~g~~~~---~~~~-~~~~p~~l~~s-pdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 27 KGIYTFRFNEETGESLP---LSDA-EVANPSYLIPS-ADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp CEEEEEEEETTTCCEEE---EEEE-ECSCCCSEEEC-TTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred CCEEEEEEeCCCCCEEE---eecc-cCCCCceEEEC-CCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 57777766 5676522 1111 34567789998 799999988886 7999999865 653 34443 356
Q ss_pred EEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEE----e--e--------cCcceeEEEEEecCCCeEEEEe-CCC
Q 011970 229 VQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF----Y--H--------LLHRNKKVDFIEQFNEKLLVKQ-ENE 293 (474)
Q Consensus 229 V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl----~--~--------h~~~v~~V~F~~~~~~~ll~~~-~D~ 293 (474)
...+++ +|..|++++ ..+++|.+|++.++..+..+ . + +..++..++|+ |++.+++++. .++
T Consensus 102 p~~~~~-dg~~l~~~~--~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~ 177 (361)
T 3scy_A 102 PCYLTT-NGKNIVTAN--YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT-PDGKYLLADDLGTD 177 (361)
T ss_dssp EEEEEE-CSSEEEEEE--TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC-TTSSEEEEEETTTT
T ss_pred cEEEEE-CCCEEEEEE--CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC-CCCCEEEEEeCCCC
Confidence 788888 777777764 34689999999754433222 1 1 12234679987 6777787765 689
Q ss_pred cEEEEECCCCc-------e------EEeccccCCceEEEEEcCCCcEEEEEc--CCcEEEEeCC-CcE--EEEeccCCCC
Q 011970 294 NLQILDVRNAE-------L------MEVSRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GEL--VTSFEDHLLW 355 (474)
Q Consensus 294 tIkIWDv~tg~-------~------~~~l~~h~~~v~sv~Fspdg~llaS~s--D~tIklWd~~-G~l--l~tl~gH~~~ 355 (474)
+|++|++.... + ......+...+..++|+|||++++.++ +++|.+||++ |++ +.++..+...
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~ 257 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN 257 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC
Confidence 99999887543 2 122233455788999999999665554 8999999994 765 3444332211
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCCccccccCC-CCeEEEEeCC--CCe--EEEEecCCCCCCCCccccCCCCCCcccc
Q 011970 356 HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGS-AGSINVSSIL--TGK--CLAKINATNCSPKVDDELGSSSTGKSKK 430 (474)
Q Consensus 356 ~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~-DgtIklWdi~--tG~--cl~tl~gH~~~~~~~~~~~~~~~~~~~~ 430 (474)
. .....++|||||++|+.++. . +++|.||++. +|+ .+..+.. ..
T Consensus 258 ~--~~~~~i~~spdg~~l~v~~~----------~~~~~i~v~~~~~~~g~~~~~~~~~~-g~------------------ 306 (361)
T 3scy_A 258 A--QGSGDIHLSPDGKYLYASNR----------LKADGVAIFKVDETNGTLTKVGYQLT-GI------------------ 306 (361)
T ss_dssp C--CCEEEEEECTTSSEEEEEEC----------SSSCEEEEEEECTTTCCEEEEEEEEC-SS------------------
T ss_pred C--CCcccEEECCCCCEEEEECC----------CCCCEEEEEEEcCCCCcEEEeeEecC-CC------------------
Confidence 0 11468999999999976654 2 5899999984 566 4555544 21
Q ss_pred ccccccccccccccccCEEEEEEcCCCCEEEEEc-CCCcEEEcc
Q 011970 431 LNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN-RHGLVHVWS 473 (474)
Q Consensus 431 ~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs-~DgtVklWd 473 (474)
.+..++|||||++|+.++ .+++|++|+
T Consensus 307 ----------------~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 307 ----------------HPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp ----------------CCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred ----------------CCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 567899999999998887 679999974
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=8.2e-22 Score=194.77 Aligned_cols=269 Identities=14% Similarity=0.133 Sum_probs=181.5
Q ss_pred CCCeEEeeec--cccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEecc--CCCCCccceee
Q 011970 106 HSGVCAAFSR--ETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR--GKPDSGFALFE 181 (474)
Q Consensus 106 ~dgtiklW~~--~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~--G~~~~~~~lf~ 181 (474)
.++.+.+|.+ ++|+....... +......++|+|||+.|++++.++..+ ..+.+|++.. |++. .+..
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~------~~v~~~~~~~~~g~~~---~~~~ 94 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQ------AAVSAFAFDKEKGTLH---LLNT 94 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTT------CEEEEEEEETTTTEEE---EEEE
T ss_pred CCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCC------CcEEEEEEeCCCCcEE---EeeE
Confidence 4678999876 55765433332 445678899999999999988543234 5888898854 5541 1111
Q ss_pred ec-cccCceEEEEeCCCCeEEEEec-CCCcEEEeecCCCeEEEEE------c----------CCcEEEEEEcCCce-EEE
Q 011970 182 SE-SLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLKNYTMLYSI------S----------DKHVQEIKISPGIM-LLI 242 (474)
Q Consensus 182 ~~-~~~~~~~V~Fs~~nGk~LaS~s-~D~tiKlWdl~tg~~l~tl------~----------~~~V~~vafSpg~~-la~ 242 (474)
.. ....|..++| ||++|+.++ .|++|.+|++.+...+..+ . ...+.+++|||++. +++
T Consensus 95 ~~~~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 95 QKTMGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp EECSSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred eccCCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence 11 2234556777 567665554 6899999999753322111 1 12468899999664 655
Q ss_pred EecCCCCccEEEEecCCCe-------EE-----EEEe-ecCcceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCceEE-
Q 011970 243 FNRSSSHVPLKILSIEDGT-------VL-----KVFY-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELME- 307 (474)
Q Consensus 243 ~s~~s~D~tIkLWdi~tG~-------~L-----~tl~-~h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~tg~~~~- 307 (474)
+. ..+..|++|++.... +. ..+. .+......++|+ |++..+++.. .+++|++||+.++++..
T Consensus 172 ~~--~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~g~~~~~ 248 (361)
T 3scy_A 172 DD--LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFN-SDGKFAYLINEIGGTVIAFRYADGMLDEI 248 (361)
T ss_dssp EE--TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTCEEEEEEEETTEEEEE
T ss_pred Ee--CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEc-CCCCEEEEEcCCCCeEEEEEecCCceEEe
Confidence 53 346789999887543 21 1222 233456789997 6777787776 69999999999887632
Q ss_pred ----eccccCCceEEEEEcCCCcEEEEEc-C--CcEEEEeCC---Cc--EEEEeccCCCCcCCCCeeEEEECCCCCEEEE
Q 011970 308 ----VSRTEFMTPSAFIFLYENQLFLTFR-N--RTVAVWNFR---GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIIS 375 (474)
Q Consensus 308 ----~l~~h~~~v~sv~Fspdg~llaS~s-D--~tIklWd~~---G~--ll~tl~gH~~~~~~~~v~svafSpDg~~LaS 375 (474)
....+...+..++|+|||++|+.+. + ++|++|+++ |+ .+..+.. ... +..++|+|||++|+.
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~-----~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIH-----PRNFIITPNGKYLLV 322 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSC-----CCEEEECTTSCEEEE
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCC-----CceEEECCCCCEEEE
Confidence 2344566788999999999886654 5 799999983 66 4555554 222 578999999999998
Q ss_pred EecCCCccccccCCCCeEEEE--eCCCCeEEEE
Q 011970 376 YCKAEPEDQWMEGSAGSINVS--SILTGKCLAK 406 (474)
Q Consensus 376 ~s~~~~~~~~~~s~DgtIklW--di~tG~cl~t 406 (474)
++. .+++|.+| |..+|++...
T Consensus 323 ~~~----------~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 323 ACR----------DTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp EET----------TTTEEEEEEECTTTCCEEEC
T ss_pred EEC----------CCCCEEEEEEECCCCcEeec
Confidence 764 37899995 6668887654
No 160
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.91 E-value=9.6e-24 Score=208.12 Aligned_cols=316 Identities=9% Similarity=0.036 Sum_probs=200.6
Q ss_pred eeeccccceeeEeecCCCce-----EEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeecccc
Q 011970 112 AFSRETNRRICFLNVSPDEV-----IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLK 186 (474)
Q Consensus 112 lW~~~tg~~l~~l~g~~~~~-----i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~ 186 (474)
..|..+|+.+..|... ... +.+++|||||+.|+.++..+. + ..+.+|++..|+.. .+... ...
T Consensus 14 ~~d~~~g~~~~~l~~~-~~~~~~~~~~~~~~SpdG~~l~~~~~~~g-~------~~l~~~d~~~~~~~---~l~~~-~~~ 81 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPT-DIICHRNYFYQKCFTQDGKKLLFAGDFDG-N------RNYYLLNLETQQAV---QLTEG-KGD 81 (396)
T ss_dssp EECTTTCCEEEECSCT-TSCEECCCTTSCCBCTTSCEEEEEECTTS-S------CEEEEEETTTTEEE---ECCCS-SCB
T ss_pred eecCCCCcceEEEecC-CCCccceeeecCcCCCCCCEEEEEEecCC-C------ceEEEEECCCCcEE---EeecC-CCC
Confidence 4477889988888753 222 678899999999988764322 2 35677888777752 12221 111
Q ss_pred CceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE--cCCcEEE-------------------EEEcCCc-eEEEEe
Q 011970 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI--SDKHVQE-------------------IKISPGI-MLLIFN 244 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl--~~~~V~~-------------------vafSpg~-~la~~s 244 (474)
....+.|| |||+.|++.+.+++|.+||+.+++..... +..+... ++++|++ .++...
T Consensus 82 ~~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 160 (396)
T 3c5m_A 82 NTFGGFIS-TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAE 160 (396)
T ss_dssp CTTTCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred ccccceEC-CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeee
Confidence 11136788 79999999999999999999998865443 3333333 3445533 222211
Q ss_pred --cCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCC------CcEEEEECCCCceEEecccc-CCc
Q 011970 245 --RSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN------ENLQILDVRNAELMEVSRTE-FMT 315 (474)
Q Consensus 245 --~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D------~tIkIWDv~tg~~~~~l~~h-~~~ 315 (474)
....+..|.+||+.+|++...+. +...+..+.|++.++.+|+..+.+ ..|.+||+.+++......++ ...
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 161 FYHTNPTCRLIKVDIETGELEVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGES 239 (396)
T ss_dssp HHHTCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEE
T ss_pred eccCCCcceEEEEECCCCcEEeecc-CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcc
Confidence 01345689999999998766554 456788999984366777776533 46889999887766554432 336
Q ss_pred eEEEEEcCCCcEEEEEc-C-----CcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECC-CCCEEEEEecCCC----c-
Q 011970 316 PSAFIFLYENQLFLTFR-N-----RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS-DQDLIISYCKAEP----E- 382 (474)
Q Consensus 316 v~sv~Fspdg~llaS~s-D-----~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSp-Dg~~LaS~s~~~~----~- 382 (474)
+..++|+|||+.|+..+ + ++|.+||+. |+..... .... .. ++|+| ||++|+.++...| +
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~------~~-~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMPP------CS-HLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECCS------EE-EEEECSSSSEEEEEECCC-------
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCCC------CC-CCccCCCCceEEEecCCcceeeccc
Confidence 78899999999877665 3 459999995 7654322 2211 23 88999 9999987542100 0
Q ss_pred cccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEE
Q 011970 383 DQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYT 462 (474)
Q Consensus 383 ~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaS 462 (474)
.......+..|.+||+.+|+. ..|..|....... ..+....+.+++|+|||+.|+.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~-----------------------~~~~~~~~~~~~~s~dg~~l~~ 367 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVL-----------------------DGDRQITHPHPSFTPNDDGVLF 367 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBC-CEEEECCCCCCCB-----------------------TTBSSTTCCCCEECTTSSEEEE
T ss_pred cccccCCCCcEEEEecccCce-EEccCCCCccccc-----------------------cccccCCCCCceEccCCCeEEE
Confidence 000112368999999988875 4565554200000 0000002456789999999887
Q ss_pred Ec-CCCcEEEcc
Q 011970 463 GN-RHGLVHVWS 473 (474)
Q Consensus 463 gs-~DgtVklWd 473 (474)
++ .++...||.
T Consensus 368 ~s~~~~~~~l~~ 379 (396)
T 3c5m_A 368 TSDFEGVPAIYI 379 (396)
T ss_dssp EECTTSSCEEEE
T ss_pred EecCCCCceEEE
Confidence 76 467777773
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.91 E-value=3.6e-23 Score=226.94 Aligned_cols=281 Identities=10% Similarity=0.050 Sum_probs=186.6
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCc----eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCC
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDE----VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKP 173 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~----~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~ 173 (474)
+++|++. ||+|++||..||++...+.++... ...+++|||||+.|++++.+...- ..=.-..+.|||+.+|++
T Consensus 28 g~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~-r~~~~~~~~~~d~~~~~~ 104 (740)
T 4a5s_A 28 HEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW-RHSYTASYDIYDLNKRQL 104 (740)
T ss_dssp SEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS-SSCEEEEEEEEETTTTEE
T ss_pred CcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE-EEccceEEEEEECCCCcE
Confidence 7888886 999999999999998888874322 124578999999999877543211 000114567999999986
Q ss_pred CCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEE-EcC--CcE-----------------EEEE
Q 011970 174 DSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS-ISD--KHV-----------------QEIK 233 (474)
Q Consensus 174 ~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~t-l~~--~~V-----------------~~va 233 (474)
.. |..+ ...+..++|| |||+.||+++ |+.|.+||+.+|++... ..+ ..+ .+++
T Consensus 105 ~~---l~~~--~~~~~~~~~S-PdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~ 177 (740)
T 4a5s_A 105 IT---EERI--PNNTQWVTWS-PVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALW 177 (740)
T ss_dssp CC---SSCC--CTTEEEEEEC-SSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEE
T ss_pred EE---cccC--CCcceeeEEC-CCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceE
Confidence 32 3322 3456689998 7999999985 78999999999886542 211 123 2489
Q ss_pred EcCCce-EEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCC---C---ceE
Q 011970 234 ISPGIM-LLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN---A---ELM 306 (474)
Q Consensus 234 fSpg~~-la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~t---g---~~~ 306 (474)
|||++. ||..+.+ +..+++|++...... ..+......+.|. ..|+. ..+.+|+|||+.+ + ++.
T Consensus 178 wSpDg~~la~~~~d--~~~v~~~~~~~~~~~---~~~~~~~~~~~yp-~~G~~----~~~~~l~v~d~~~~~~~~~~~~~ 247 (740)
T 4a5s_A 178 WSPNGTFLAYAQFN--DTEVPLIEYSFYSDE---SLQYPKTVRVPYP-KAGAV----NPTVKFFVVNTDSLSSVTNATSI 247 (740)
T ss_dssp ECTTSSEEEEEEEE--CTTCCEEEEEECCST---TCSSCEEEEEECC-BTTSC----CCEEEEEEEETTSCCSSSCCCEE
T ss_pred ECCCCCEEEEEEEc--ccCCceEEEEeecCC---CCCCCcceeecCC-CCcCc----CCeeEEEEEECCCCCCCCcceEE
Confidence 998554 5554322 334888876321100 0133455666663 22321 1223789999999 8 555
Q ss_pred Eecc-----ccCCceEEEEEcCCCcEEEEEc-----CCcEEEEeCC-Cc----EEE--Ee--ccCCCCcCCCCeeEEEEC
Q 011970 307 EVSR-----TEFMTPSAFIFLYENQLFLTFR-----NRTVAVWNFR-GE----LVT--SF--EDHLLWHPDCNTNNIYIT 367 (474)
Q Consensus 307 ~~l~-----~h~~~v~sv~Fspdg~llaS~s-----D~tIklWd~~-G~----ll~--tl--~gH~~~~~~~~v~svafS 367 (474)
++.. +|...+..++|||||++++... +.+|.+||++ |+ |.. ++ ++|..|+......+++||
T Consensus 248 ~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fs 327 (740)
T 4a5s_A 248 QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFT 327 (740)
T ss_dssp EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEEC
T ss_pred EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEc
Confidence 5533 4788899999999999777653 2379999994 87 543 33 678888521002378999
Q ss_pred CCCCEEE-EEecCCCccccccCCCCeEEEEeCCCCeEEEE
Q 011970 368 SDQDLII-SYCKAEPEDQWMEGSAGSINVSSILTGKCLAK 406 (474)
Q Consensus 368 pDg~~La-S~s~~~~~~~~~~s~DgtIklWdi~tG~cl~t 406 (474)
|||+.|+ ..+. .+....|.+||+.+|++.+.
T Consensus 328 pDG~~l~~~~s~--------~~G~~~l~~~~~~~~~~~~l 359 (740)
T 4a5s_A 328 LDGNSFYKIISN--------EEGYRHICYFQIDKKDCTFI 359 (740)
T ss_dssp TTSSEEEEEEEC--------TTSCEEEEEEETTCSSCEES
T ss_pred CCCCEEEEEEEc--------CCCceEEEEEECCCCceEec
Confidence 9999888 6654 12246799999877776543
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=9.8e-23 Score=203.94 Aligned_cols=241 Identities=11% Similarity=0.052 Sum_probs=170.6
Q ss_pred CceEEEEeCCCCeEEEEecCCCcEEEeecC-CCeEEEEEc---CCcEEEEEEcCCce--EEEEec------CC-----CC
Q 011970 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSIS---DKHVQEIKISPGIM--LLIFNR------SS-----SH 249 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~-tg~~l~tl~---~~~V~~vafSpg~~--la~~s~------~s-----~D 249 (474)
.|.+++|+ |||++|++++.+ +|.+||+. +|++..... ...+..++|||++. ++..+. .+ .+
T Consensus 41 ~~~~~a~s-pdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 41 PISWMTFD-HERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCSEEEEC-TTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCcEEEEC-CCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 46689998 799999988888 99999997 898765432 13355689998665 232211 01 47
Q ss_pred ccEEEEecC-CCeEEEEEee----cCcceeEEEEEecCCCeEEEEe-CCCcEEEEECC-CCceEE--ecc--ccCCceEE
Q 011970 250 VPLKILSIE-DGTVLKVFYH----LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR-NAELME--VSR--TEFMTPSA 318 (474)
Q Consensus 250 ~tIkLWdi~-tG~~L~tl~~----h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~-tg~~~~--~l~--~h~~~v~s 318 (474)
+++++|++. +|++..++.. +...+..++|+ |++.+++++. .+++|++||+. +|++.. .+. .|...+..
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~s-pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFD-PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEEC-CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 889999997 6887766552 45678899997 6777777765 57899999999 888643 222 24567999
Q ss_pred EEEcCCCcEEEEEc--CCcEEEEeCC---CcEE---EEec-------cCCCCc-CCCCeeEEE-ECCCCCEEEEEecCCC
Q 011970 319 FIFLYENQLFLTFR--NRTVAVWNFR---GELV---TSFE-------DHLLWH-PDCNTNNIY-ITSDQDLIISYCKAEP 381 (474)
Q Consensus 319 v~Fspdg~llaS~s--D~tIklWd~~---G~ll---~tl~-------gH~~~~-~~~~v~sva-fSpDg~~LaS~s~~~~ 381 (474)
++|+|||++|+.++ +++|.+|+++ |++. +++. +|.... ..-.+..++ |||||++|++++.
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~--- 274 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR--- 274 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE---
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC---
Confidence 99999999887665 7899999863 7763 2222 222100 000157899 9999999887654
Q ss_pred ccccccCCC----CeEEEEeCC-CCeEEE---EecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEE
Q 011970 382 EDQWMEGSA----GSINVSSIL-TGKCLA---KINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFY 453 (474)
Q Consensus 382 ~~~~~~s~D----gtIklWdi~-tG~cl~---tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slaf 453 (474)
+.+ ++|++|++. +|++.. .+..+.. .+.+++|
T Consensus 275 ------~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~----------------------------------~~~~~a~ 314 (365)
T 1jof_A 275 ------ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTS----------------------------------GGHSNAV 314 (365)
T ss_dssp ------ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSC----------------------------------CTTCCCE
T ss_pred ------CCCCCCCCeEEEEEECCCCCEEEeeeeeecCCC----------------------------------Cccccee
Confidence 112 399999995 788654 2333432 3456899
Q ss_pred cC---CCCEEEEEcCC-CcEEEcc
Q 011970 454 DE---ERNEIYTGNRH-GLVHVWS 473 (474)
Q Consensus 454 Sp---Dg~~LaSgs~D-gtVklWd 473 (474)
|| ||++||+++.+ ++|+||+
T Consensus 315 sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 315 SPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp EECTTCTTEEEEECSSSCEEEEEE
T ss_pred cCCCcCCCEEEEEEcCCCeEEEEE
Confidence 99 89999999875 9999996
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.91 E-value=2.4e-21 Score=185.30 Aligned_cols=237 Identities=11% Similarity=0.217 Sum_probs=185.3
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC--------CcEEEEEEc-CCceEEEEecCCCCccEEE
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--------KHVQEIKIS-PGIMLLIFNRSSSHVPLKI 254 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~--------~~V~~vafS-pg~~la~~s~~s~D~tIkL 254 (474)
++..|..|+|+ ++|+++++.+.++.|++||.+ ++.+..+.. ..+..|+|+ +++.+.++.. +.+..|++
T Consensus 28 ~~~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~-~~~~~i~~ 104 (286)
T 1q7f_A 28 QFTEPSGVAVN-AQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER-SPTHQIQI 104 (286)
T ss_dssp CBSCEEEEEEC-TTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC-GGGCEEEE
T ss_pred ccCCCceEEEC-CCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC-CCCCEEEE
Confidence 46678899998 799999998999999999976 777776642 468999995 7776666642 12578999
Q ss_pred EecCCCeEEEEEe-ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecc--ccCCceEEEEEcCCCcEEEEE
Q 011970 255 LSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR--TEFMTPSAFIFLYENQLFLTF 331 (474)
Q Consensus 255 Wdi~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~--~h~~~v~sv~Fspdg~llaS~ 331 (474)
|| .+|+.+.++. .+......++|. +++..+++...++.|.+||. +++.+..+. ++...+..++|+|+|+++++.
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVD-NKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEEC-TTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EC-CCCcEEEEecCccCCCceEEEEe-CCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 99 7899998885 334567889986 45544444457899999995 566665543 566789999999999999998
Q ss_pred c-CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCC-eEEEEeCCCCeEEEEecC
Q 011970 332 R-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG-SINVSSILTGKCLAKINA 409 (474)
Q Consensus 332 s-D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dg-tIklWdi~tG~cl~tl~g 409 (474)
+ ++.|++||.+|+.+.++..+... .....|+|+|||+++++.+. ++ .|.+|| .+|+.+.++..
T Consensus 182 ~~~~~i~~~~~~g~~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~-----------~~~~i~~~~-~~g~~~~~~~~ 246 (286)
T 1q7f_A 182 NRAHCVKVFNYEGQYLRQIGGEGIT---NYPIGVGINSNGEILIADNH-----------NNFNLTIFT-QDGQLISALES 246 (286)
T ss_dssp GGGTEEEEEETTCCEEEEESCTTTS---CSEEEEEECTTCCEEEEECS-----------SSCEEEEEC-TTSCEEEEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEccCCcc---CCCcEEEECCCCCEEEEeCC-----------CCEEEEEEC-CCCCEEEEEcc
Confidence 8 99999999999999888654311 11579999999999998754 55 999999 58999999977
Q ss_pred CCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 410 TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 410 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
+... ..+.+++|+|||+.+++ +.|++|++|+.
T Consensus 247 ~~~~--------------------------------~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 247 KVKH--------------------------------AQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp SSCC--------------------------------SCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred cCCC--------------------------------CcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 6520 15789999999998877 57999999973
No 164
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.90 E-value=3.3e-21 Score=194.86 Aligned_cols=273 Identities=10% Similarity=0.084 Sum_probs=194.0
Q ss_pred CCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeec------CCCccceeeeEEEEeEeccCCCCCccce
Q 011970 106 HSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYA------SDNFSSLKCRSTKIEYIRRGKPDSGFAL 179 (474)
Q Consensus 106 ~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~------s~d~s~Lk~~~~~iw~i~~G~~~~~~~l 179 (474)
.|+++.+||..+|+.+.++.. +... .++|||||+.|..++.+. ..+ .++.+||+.+++..+.+++
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~-g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~------~~v~v~d~~t~~~~~~i~~ 99 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPT-AFNG--HVQVSNDGKKIYTMTTYHERITRGKRS------DVVEVWDADKLTFEKEISL 99 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEEC-CEEE--EEEECTTSSEEEEEEEEETTSSSSCEE------EEEEEEETTTCCEEEEEEE
T ss_pred ccCeEEEEECCCCeEEEEecC-CCCC--ceEECCCCCEEEEEEecccccccCCCC------CEEEEEECcCCcEEEEEEc
Confidence 478999999999999999986 3344 999999999998876431 123 5899999988887554433
Q ss_pred eee--ccccCceEEEEeCCCCeEEEEecC--CCcEEEeecCCCeEEEE-EcCCcEEEEEEcCCc--eEEEEecCCCCccE
Q 011970 180 FES--ESLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYS-ISDKHVQEIKISPGI--MLLIFNRSSSHVPL 252 (474)
Q Consensus 180 f~~--~~~~~~~~V~Fs~~nGk~LaS~s~--D~tiKlWdl~tg~~l~t-l~~~~V~~vafSpg~--~la~~s~~s~D~tI 252 (474)
-.. ....+|..++|| |||++|..+.. +++|.+||+++++.+.+ +.....+.+.+.|.+ .+++. +.|+.+
T Consensus 100 ~~~~~~~g~~p~~i~~s-pdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~---~~dg~~ 175 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQT-TDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTI---CGDGGL 175 (361)
T ss_dssp CTTBCCBCCCGGGEEEC-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEE---ETTSSE
T ss_pred CccccccCCCcceEEEC-CCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEE---CCCCcE
Confidence 211 012467789998 79999887763 68999999999999998 775555667888733 44444 346789
Q ss_pred EEEecCC-CeEEEEEe------ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceE--Eec---c---ccC----
Q 011970 253 KILSIED-GTVLKVFY------HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM--EVS---R---TEF---- 313 (474)
Q Consensus 253 kLWdi~t-G~~L~tl~------~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~--~~l---~---~h~---- 313 (474)
.+|++++ |++..... .+...+ .+.+. +++..++..+.+++|.++|+..+... ... . .+.
T Consensus 176 ~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~-~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p 253 (361)
T 2oiz_A 176 LTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPA-LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVP 253 (361)
T ss_dssp EEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCE-ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEE
T ss_pred EEEEECCCCcEeeeccccceEcCCCCce-EEEec-ccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccccccc
Confidence 9999875 77763321 111111 12223 45667777778899999999766432 211 1 011
Q ss_pred CceEEEEEcCCCcEEEEE-c-C----------CcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCC
Q 011970 314 MTPSAFIFLYENQLFLTF-R-N----------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAE 380 (474)
Q Consensus 314 ~~v~sv~Fspdg~llaS~-s-D----------~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~ 380 (474)
.....++|+||++.+..+ + + .+|.+||+. ++.+.++..|. . ++|+|+|||++|++++
T Consensus 254 ~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p------~~ia~spdg~~l~v~n--- 323 (361)
T 2oiz_A 254 GGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-A------LSMTIDQQRNLMLTLD--- 323 (361)
T ss_dssp CCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-C------CEEEEETTTTEEEEEC---
T ss_pred CCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-e------eEEEECCCCCEEEEeC---
Confidence 111137899996655443 3 2 489999995 99999999886 3 6899999999999753
Q ss_pred CccccccCCCCeEEEEeCCCC--eEEEEecCCCC
Q 011970 381 PEDQWMEGSAGSINVSSILTG--KCLAKINATNC 412 (474)
Q Consensus 381 ~~~~~~~s~DgtIklWdi~tG--~cl~tl~gH~~ 412 (474)
+++|.+||..|| ++++++.++..
T Consensus 324 ---------~~~v~v~D~~t~~l~~~~~i~~~G~ 348 (361)
T 2oiz_A 324 ---------GGNVNVYDISQPEPKLLRTIEGAAE 348 (361)
T ss_dssp ---------SSCEEEEECSSSSCEEEEEETTSCS
T ss_pred ---------CCeEEEEECCCCcceeeEEeccCCC
Confidence 389999999999 99999976654
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=2.3e-21 Score=193.95 Aligned_cols=273 Identities=9% Similarity=0.019 Sum_probs=184.7
Q ss_pred EEEEeeCC--CeEEeeec--cccce--eeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEec-cCC
Q 011970 100 IVFALAHS--GVCAAFSR--ETNRR--ICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR-RGK 172 (474)
Q Consensus 100 ~las~s~d--gtiklW~~--~tg~~--l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~-~G~ 172 (474)
.|+.|++. +.|.+|++ ++|+. +..........+..++|+|||+.|++++ .+ ++.+|++. +|+
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~----~~-------~v~~~~~~~~g~ 72 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA----MK-------KWSSFAVKSPTE 72 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE----BT-------EEEEEEEEETTE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEc----cc-------eEEEEEECCCCC
Confidence 35556653 56777664 56764 2222211234578899999999998765 22 68889986 787
Q ss_pred CCCccceeeeccccCceEEEEeCCCCe--EEEEec-------------CCCcEEEeecC-CCeEEEEEc------CCcEE
Q 011970 173 PDSGFALFESESLKWPGFVEFDDVNGK--VLTYSA-------------QDSIYKVFDLK-NYTMLYSIS------DKHVQ 230 (474)
Q Consensus 173 ~~~~~~lf~~~~~~~~~~V~Fs~~nGk--~LaS~s-------------~D~tiKlWdl~-tg~~l~tl~------~~~V~ 230 (474)
+.. +......+.+..++|+ |||+ +|++++ .|+++++|++. +|++...+. ...+.
T Consensus 73 ~~~---~~~~~~~g~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~ 148 (365)
T 1jof_A 73 IVH---EASHPIGGHPRANDAD-TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIH 148 (365)
T ss_dssp EEE---EEEEECCSSGGGGCTT-SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEE
T ss_pred EEE---eeEeecCCCCccEEEC-CCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcce
Confidence 522 2222111235578998 7999 455553 69999999997 587654442 35799
Q ss_pred EEEEcCCc-eEEEEecCCCCccEEEEecC-CCeEE--EEEe--ecCcceeEEEEEecCCCeEEEEe-CCCcEEEEECC--
Q 011970 231 EIKISPGI-MLLIFNRSSSHVPLKILSIE-DGTVL--KVFY--HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR-- 301 (474)
Q Consensus 231 ~vafSpg~-~la~~s~~s~D~tIkLWdi~-tG~~L--~tl~--~h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~-- 301 (474)
+++|||++ .|+++. ..+..|++||+. +|++. ..+. .|......++|+ |++..++++. .+++|++|++.
T Consensus 149 ~~~~spdG~~l~~~~--~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~ 225 (365)
T 1jof_A 149 GMVFDPTETYLYSAD--LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMH-PTGNYLYALMEAGNRICEYVIDPA 225 (365)
T ss_dssp EEEECTTSSEEEEEE--TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEEECCCCCEEEEEc--CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEEC-CCCCEEEEEECCCCeEEEEEEeCC
Confidence 99999865 455553 335789999998 88764 3443 234567889997 6777887776 57899999765
Q ss_pred CCceE------Eecc----ccCC------ceEEEE-EcCCCcEEEEEc--CC-----cEEEEeC--CCcEEE---EeccC
Q 011970 302 NAELM------EVSR----TEFM------TPSAFI-FLYENQLFLTFR--NR-----TVAVWNF--RGELVT---SFEDH 352 (474)
Q Consensus 302 tg~~~------~~l~----~h~~------~v~sv~-Fspdg~llaS~s--D~-----tIklWd~--~G~ll~---tl~gH 352 (474)
+|++. .++. +|.. .+..++ |+|||++|++++ +. +|++|++ +|++.. .+..+
T Consensus 226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~ 305 (365)
T 1jof_A 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP 305 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence 67753 2232 2232 588999 999999877654 33 8999998 377654 23334
Q ss_pred CCCcCCCCeeEEEECC---CCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEE
Q 011970 353 LLWHPDCNTNNIYITS---DQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK 406 (474)
Q Consensus 353 ~~~~~~~~v~svafSp---Dg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~t 406 (474)
... ...++|+| ||++|++++. .+++|+||++..+ .+..
T Consensus 306 ~~~-----~~~~a~sp~~~dg~~l~v~~~----------~~~~v~v~~~~~~-~l~~ 346 (365)
T 1jof_A 306 TSG-----GHSNAVSPCPWSDEWMAITDD----------QEGWLEIYRWKDE-FLHR 346 (365)
T ss_dssp SCC-----TTCCCEEECTTCTTEEEEECS----------SSCEEEEEEEETT-EEEE
T ss_pred CCC-----cccceecCCCcCCCEEEEEEc----------CCCeEEEEEEchh-hCce
Confidence 332 36789999 8999998864 2589999998665 4443
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.90 E-value=8.3e-22 Score=210.59 Aligned_cols=295 Identities=10% Similarity=0.011 Sum_probs=194.8
Q ss_pred ccccEEEEEeeccEEEEee----CCCeEEeeeccccceeeEeecCCCceEE---------EEEEe--eCCCE-EEEEEee
Q 011970 87 KRTKVIEIVAARDIVFALA----HSGVCAAFSRETNRRICFLNVSPDEVIR---------SLFYN--KNNDS-LITVSVY 150 (474)
Q Consensus 87 ~~~~V~~i~~s~~~las~s----~dgtiklW~~~tg~~l~~l~g~~~~~i~---------sv~fs--pdg~~-Lis~S~~ 150 (474)
|...|.++.++++.++-.+ .++..+||.+..+.....|.+++ ..++ +.+|+ |||+. |+.++ +
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~-~ 99 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH-F 99 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSSCEEEEEB-T
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCC-ccccccccccCCccceeeeecCCCeEEEEEE-C
Confidence 4567888889966544443 48899999976666677777633 4456 66565 99999 77543 1
Q ss_pred cCCCccceeeeEEEEeEec--c-CCCCCccceeeec---cccCceEEEEeCCCCeEEEEecCC----------CcEEEee
Q 011970 151 ASDNFSSLKCRSTKIEYIR--R-GKPDSGFALFESE---SLKWPGFVEFDDVNGKVLTYSAQD----------SIYKVFD 214 (474)
Q Consensus 151 ~s~d~s~Lk~~~~~iw~i~--~-G~~~~~~~lf~~~---~~~~~~~V~Fs~~nGk~LaS~s~D----------~tiKlWd 214 (474)
. + ..+.++++. . |+. . .|.... +...+..++|| |||+.|++++.| .+|++||
T Consensus 100 ~--~------~~l~~~~~~~~g~~~~-~--~l~~~~~~~~~~~~~~~~~s-pDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 100 G--D------QRLYAFEPDAPGGAVP-R--PLTPVSAVGGGLRWADPVLL-PERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp T--T------CCEEEECTTSTTCCCC-E--ECSCCCCSTTCEEEEEEEEE-TTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred C--C------CeEEEEcCCCCCCCCC-E--eccCCccCCCCccccCcEEC-CCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 1 2 234444433 2 443 1 222210 12345679999 799999999987 6899999
Q ss_pred cCC------CeEEEEE-c-CCcEEEEEEcCCc-eEEEEecCC-----CCccEEEEecC-CC---eEEEEEeecCcceeEE
Q 011970 215 LKN------YTMLYSI-S-DKHVQEIKISPGI-MLLIFNRSS-----SHVPLKILSIE-DG---TVLKVFYHLLHRNKKV 276 (474)
Q Consensus 215 l~t------g~~l~tl-~-~~~V~~vafSpg~-~la~~s~~s-----~D~tIkLWdi~-tG---~~L~tl~~h~~~v~~V 276 (474)
+.+ ++..... . ...+.+++|||++ +|+..+... ....|.+||++ +| ++.....+|...+..+
T Consensus 168 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~ 247 (662)
T 3azo_A 168 LDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQA 247 (662)
T ss_dssp TTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEE
T ss_pred CCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcce
Confidence 988 6654322 2 3568889999855 555554322 12579999999 68 5555555667888999
Q ss_pred EEEecCCCeEEEEeCCC--cEEEEECCCCceEEeccccCCc--------eEEEEEcCCCcEEEEEcCCcEEEE--eCCCc
Q 011970 277 DFIEQFNEKLLVKQENE--NLQILDVRNAELMEVSRTEFMT--------PSAFIFLYENQLFLTFRNRTVAVW--NFRGE 344 (474)
Q Consensus 277 ~F~~~~~~~ll~~~~D~--tIkIWDv~tg~~~~~l~~h~~~--------v~sv~Fspdg~llaS~sD~tIklW--d~~G~ 344 (474)
+|+ |+|..++++..|+ +|.+||+.++++.++..++... +..++|+|++++++++++++++|| |.++.
T Consensus 248 ~~s-pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 326 (662)
T 3azo_A 248 EWA-PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESG 326 (662)
T ss_dssp EEC-TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTT
T ss_pred EEC-CCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCC
Confidence 998 5666444456777 6666777788887776655433 567999999999998877899999 66656
Q ss_pred EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCC--eEEEEeCCCCeEEEEecCCC
Q 011970 345 LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG--SINVSSILTGKCLAKINATN 411 (474)
Q Consensus 345 ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dg--tIklWdi~tG~cl~tl~gH~ 411 (474)
.++.+..|... +..+. ++||+.++-.+. +.+. .|.+||+.+|++......|.
T Consensus 327 ~~~~l~~~~~~-----~~~~~-s~~~~~~~~~~~---------~~~~~~~i~~~d~~~g~~~~l~~~~~ 380 (662)
T 3azo_A 327 ELVDAAGPWTE-----WAATL-TVSGTRAVGVAA---------SPRTAYEVVELDTVTGRARTIGARHT 380 (662)
T ss_dssp EEEECCSSCCE-----EEEEE-EEETTEEEEEEE---------ETTEEEEEEEEETTTCCEEEEESCCC
T ss_pred cEEEecCCCCe-----EEEEE-ecCCCEEEEEEc---------CCCCCCEEEEEECCCCceEEeecCCc
Confidence 68899888654 45551 455554432221 1143 45666777888655444554
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.89 E-value=5.5e-23 Score=225.45 Aligned_cols=232 Identities=11% Similarity=0.097 Sum_probs=166.4
Q ss_pred EEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCC-----c--EEEEEEcCCce-EEEEecC------CCCccEEEE
Q 011970 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-----H--VQEIKISPGIM-LLIFNRS------SSHVPLKIL 255 (474)
Q Consensus 190 ~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~-----~--V~~vafSpg~~-la~~s~~------s~D~tIkLW 255 (474)
.|+|+ |||++|+++ |++|++||+++|++...+..+ . ..+++|||++. ||..+.. +....+.||
T Consensus 21 ~~~w~-~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 21 SLRWI-SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CEEEC-SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEEC-CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 79998 799999987 999999999999987777632 1 24589998554 5544321 111456799
Q ss_pred ecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEe-ccccCCce-----------------E
Q 011970 256 SIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV-SRTEFMTP-----------------S 317 (474)
Q Consensus 256 di~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~-l~~h~~~v-----------------~ 317 (474)
|+++|++. .+..|...+..++|+ |+|.+|+.. .|++|.+||+.+|++.++ ..++...+ .
T Consensus 98 d~~~~~~~-~l~~~~~~~~~~~~S-PdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 98 DLNKRQLI-TEERIPNNTQWVTWS-PVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp ETTTTEEC-CSSCCCTTEEEEEEC-SSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred ECCCCcEE-EcccCCCcceeeEEC-CCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 99999865 466667789999998 678888776 578999999999998775 33443322 3
Q ss_pred EEEEcCCCcEEEEEc-CC------------------------------------cEEEEeCCC---c---EEEEec----
Q 011970 318 AFIFLYENQLFLTFR-NR------------------------------------TVAVWNFRG---E---LVTSFE---- 350 (474)
Q Consensus 318 sv~Fspdg~llaS~s-D~------------------------------------tIklWd~~G---~---ll~tl~---- 350 (474)
+++|||||+.||..+ |. +|.|||+++ . ....+.
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 589999999999886 43 478889854 2 333443
Q ss_pred --cCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe----EEEE--e--cCCCCCCCCcccc
Q 011970 351 --DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK----CLAK--I--NATNCSPKVDDEL 420 (474)
Q Consensus 351 --gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~----cl~t--l--~gH~~~~~~~~~~ 420 (474)
+|..+ +.+++|||||++++..... .+.+.+|++||+.+|+ |... + ++|..
T Consensus 255 ~~~~~~~-----~~~~~wspdg~~~~~~~~r-------~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~-------- 314 (740)
T 4a5s_A 255 MLIGDHY-----LCDVTWATQERISLQWLRR-------IQNYSVMDICDYDESSGRWNCLVARQHIEMSTTG-------- 314 (740)
T ss_dssp HHTSCEE-----EEEEEEEETTEEEEEEEES-------STTEEEEEEEEEETTTTEEEECGGGCEEEECSSS--------
T ss_pred CCCCCeE-----EEEEEEeCCCeEEEEEeCC-------CCCEEEEEEEECCCCccccceeEEEEeeeccCCc--------
Confidence 36655 6899999999988876541 2235689999999998 6533 2 45553
Q ss_pred CCCCCCccccccccccccccccccccCE-----EEEEEcCCCCEEE-EEc-CCCc--EEEcc
Q 011970 421 GSSSTGKSKKLNKSSYIRSTVGEALEDI-----TSLFYDEERNEIY-TGN-RHGL--VHVWS 473 (474)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~l~~V-----~slafSpDg~~La-Sgs-~Dgt--VklWd 473 (474)
+| .+++|||||+.|+ ..+ .+|. |.+||
T Consensus 315 --------------------------~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 315 --------------------------WVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp --------------------------CSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred --------------------------eEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEE
Confidence 33 3688999999987 666 5554 44444
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.89 E-value=2.7e-21 Score=191.37 Aligned_cols=245 Identities=12% Similarity=0.090 Sum_probs=186.6
Q ss_pred ccCceEEEEeCCCCeEEEEecCC------------------------CcEEEeecCCCeEEEEEcC---CcEEEEEEcCC
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQD------------------------SIYKVFDLKNYTMLYSISD---KHVQEIKISPG 237 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D------------------------~tiKlWdl~tg~~l~tl~~---~~V~~vafSpg 237 (474)
+..|..|+|+ |+|+++++.+.+ ++|.+||.++|+++..+.. .....|+|+|+
T Consensus 23 l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 5667789998 799999998887 4799999999998877652 47899999986
Q ss_pred ceEEEEecCCCCccEEEEecCCCe--EEEEE---------eecCcceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCce
Q 011970 238 IMLLIFNRSSSHVPLKILSIEDGT--VLKVF---------YHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAEL 305 (474)
Q Consensus 238 ~~la~~s~~s~D~tIkLWdi~tG~--~L~tl---------~~h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~tg~~ 305 (474)
+.|.++. ..++.|++||. +|+ .+.++ .++......|+|.+.++..+++.+ .++.|++|| .+|++
T Consensus 102 g~l~v~d--~~~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~ 177 (329)
T 3fvz_A 102 GNYWVTD--VALHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKF 177 (329)
T ss_dssp SCEEEEE--TTTTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCE
T ss_pred CCEEEEE--CCCCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCE
Confidence 6666654 44689999997 455 67777 344556789998732444444455 699999999 77888
Q ss_pred EEecc----------ccCCceEEEEEcCC-CcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCE
Q 011970 306 MEVSR----------TEFMTPSAFIFLYE-NQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 372 (474)
Q Consensus 306 ~~~l~----------~h~~~v~sv~Fspd-g~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~ 372 (474)
+..+. ++...+..++|+|+ |+++++.+ +++|++||.+ |+++.++...... ..+.+++|+| |.+
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~---~~~~~~~~~p-g~~ 253 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFG---RNVFAISYIP-GFL 253 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTT---TCEEEEEEET-TEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccC---CCcceeeecC-CEE
Confidence 77664 34566999999998 99999988 9999999997 9999999543221 1267999999 555
Q ss_pred EEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEE
Q 011970 373 IISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLF 452 (474)
Q Consensus 373 LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sla 452 (474)
+++.+. .-.+...+.+|++||+.+|+++.++..... .+....+|+
T Consensus 254 ~~~~g~----~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~-------------------------------~~~~p~~ia 298 (329)
T 3fvz_A 254 FAVNGK----PYFGDQEPVQGFVMNFSSGEIIDVFKPVRK-------------------------------HFDMPHDIV 298 (329)
T ss_dssp EEEECC----CCTTCSCCCCEEEEETTTCCEEEEECCSSS-------------------------------CCSSEEEEE
T ss_pred EEeCCC----EEeccCCCcEEEEEEcCCCeEEEEEcCCCC-------------------------------ccCCeeEEE
Confidence 554321 223344577999999999999999842111 112789999
Q ss_pred EcCCCCEEEEEcCCCcEEEcc
Q 011970 453 YDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 453 fSpDg~~LaSgs~DgtVklWd 473 (474)
|+|||+.+++...++.|++|+
T Consensus 299 ~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 299 ASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp ECTTSEEEEEESSSCCEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEe
Confidence 999999999999999999997
No 169
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.1e-21 Score=203.84 Aligned_cols=207 Identities=8% Similarity=0.062 Sum_probs=156.5
Q ss_pred eEEEEeCCCCeEEEEecCCCcEEEeecCCC-----------eEE-----EEEc-CCcEEEEEEcC-CceEEEEe-cCCCC
Q 011970 189 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNY-----------TML-----YSIS-DKHVQEIKISP-GIMLLIFN-RSSSH 249 (474)
Q Consensus 189 ~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg-----------~~l-----~tl~-~~~V~~vafSp-g~~la~~s-~~s~D 249 (474)
..++++ +++.+|+.++.|+ ++||+.... ... .+++ ...|.+++||| |.+||++. +++.|
T Consensus 40 n~lavs-~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d 117 (434)
T 2oit_A 40 SLLAVS-NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG 117 (434)
T ss_dssp BCEEEE-TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred cEEEEe-cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence 368998 6778899898888 999875311 111 1222 34699999998 45555311 25779
Q ss_pred ccEEEEecCCC--------e---EEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEE
Q 011970 250 VPLKILSIEDG--------T---VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSA 318 (474)
Q Consensus 250 ~tIkLWdi~tG--------~---~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~s 318 (474)
++|+|||++++ + .++.+.+|...|..|+|++..+..|++++.|++|+|||+++++++....+|...|.+
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~ 197 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTS 197 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEE
T ss_pred ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeE
Confidence 99999999876 2 256677888999999998544677888999999999999999887777789999999
Q ss_pred EEEcCCCcEEEEEc-CCcEEEEeCCCcEEEEeccCCCCcCC--CCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEE
Q 011970 319 FIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPD--CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINV 395 (474)
Q Consensus 319 v~Fspdg~llaS~s-D~tIklWd~~G~ll~tl~gH~~~~~~--~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIkl 395 (474)
++|+|+|++|++++ |++|++||.+|+...++..|.....+ ..|.+++|+|++.++++++..+.+. .....+++
T Consensus 198 v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~----~~~~~v~i 273 (434)
T 2oit_A 198 VCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTL----ETSPDVVM 273 (434)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCS----SSCCEEEE
T ss_pred EEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCcc----CCCCceEE
Confidence 99999999999999 99999999998888888777542110 1378999999999998876521000 01134999
Q ss_pred EeCCCC
Q 011970 396 SSILTG 401 (474)
Q Consensus 396 Wdi~tG 401 (474)
||+...
T Consensus 274 ~~l~~~ 279 (434)
T 2oit_A 274 ALLPKK 279 (434)
T ss_dssp EECCCT
T ss_pred EEeccC
Confidence 998754
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=2.3e-21 Score=191.85 Aligned_cols=273 Identities=10% Similarity=0.060 Sum_probs=182.2
Q ss_pred ccEEEEeeC-CCe--EEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCC
Q 011970 98 RDIVFALAH-SGV--CAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD 174 (474)
Q Consensus 98 ~~~las~s~-dgt--iklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~ 174 (474)
|+.||.++. +|. +.+|++.+|+......+ +...+.+++|||||+.|+.++ .+ +.+.+|++.+|+..
T Consensus 47 g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~spdg~~l~~~~----~~------~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 47 GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RGDNTFGGFLSPDDDALFYVK----DG------RNLMRVDLATLEEN 115 (388)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTCEEEECCCS-SCBCSSSCEECTTSSEEEEEE----TT------TEEEEEETTTCCEE
T ss_pred CCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-CCCCccceEEcCCCCEEEEEe----CC------CeEEEEECCCCcce
Confidence 888888887 775 77789888888776664 555566789999999999866 34 58899999988852
Q ss_pred CccceeeeccccCceEE--EEeCCCCeEEEE----------------------ecCCCcEEEeecCCCeEEEEEc-CCcE
Q 011970 175 SGFALFESESLKWPGFV--EFDDVNGKVLTY----------------------SAQDSIYKVFDLKNYTMLYSIS-DKHV 229 (474)
Q Consensus 175 ~~~~lf~~~~~~~~~~V--~Fs~~nGk~LaS----------------------~s~D~tiKlWdl~tg~~l~tl~-~~~V 229 (474)
.++.. +..++... .++ |||+.|+. ...+..|.+||+++|+...... ...+
T Consensus 116 ---~~~~~-~~~~~~~~~~~~~-~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~ 190 (388)
T 3pe7_A 116 ---VVYQV-PAEWVGYGTWVAN-SDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWL 190 (388)
T ss_dssp ---EEEEC-CTTEEEEEEEEEC-TTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCE
T ss_pred ---eeeec-hhhcccccceeEC-CCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccc
Confidence 23332 12233222 345 79999884 2356789999999998654433 4679
Q ss_pred EEEEEcC-CceEEEEecCCC----CccEEEEecCCCeEEEEEeecC--cceeEEEEEecCCCeEEEEe-C-CC---cEEE
Q 011970 230 QEIKISP-GIMLLIFNRSSS----HVPLKILSIEDGTVLKVFYHLL--HRNKKVDFIEQFNEKLLVKQ-E-NE---NLQI 297 (474)
Q Consensus 230 ~~vafSp-g~~la~~s~~s~----D~tIkLWdi~tG~~L~tl~~h~--~~v~~V~F~~~~~~~ll~~~-~-D~---tIkI 297 (474)
..++||| ++..+++..... ...|.++|+.+++. +.+..+. ..+..++|+ |++.+|+..+ . +. +|.+
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~ 268 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWV-PDGSALVYVSYLKGSPDRFIYS 268 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEEC-TTSSCEEEEEEETTCCCEEEEE
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceEC-CCCCEEEEEecCCCCCcceEEE
Confidence 9999999 665444433222 34688888866544 4454433 256788887 6788787644 2 22 4999
Q ss_pred EECCCCceEEe--ccccCCc---eEEEEEcCCCcEEEEE---------c-CCcEEEEeCCCcEEEEeccCCC-Cc-----
Q 011970 298 LDVRNAELMEV--SRTEFMT---PSAFIFLYENQLFLTF---------R-NRTVAVWNFRGELVTSFEDHLL-WH----- 356 (474)
Q Consensus 298 WDv~tg~~~~~--l~~h~~~---v~sv~Fspdg~llaS~---------s-D~tIklWd~~G~ll~tl~gH~~-~~----- 356 (474)
||+.+|+...+ +.++... +..++|+|||+.|+.. . +..|.+||+++..++.+..|.. |.
T Consensus 269 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~ 348 (388)
T 3pe7_A 269 ADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGD 348 (388)
T ss_dssp ECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTB
T ss_pred EecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccc
Confidence 99999985443 3331111 1123799999988853 4 6799999997555566776654 10
Q ss_pred CCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeC
Q 011970 357 PDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI 398 (474)
Q Consensus 357 ~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi 398 (474)
....+..++|||||++|+..+. .++...||.+
T Consensus 349 ~~~~~~~~~~spDg~~l~~~s~----------~~g~~~l~~~ 380 (388)
T 3pe7_A 349 RQVTHPHPSFTPDDKQILFTSD----------VHGKPALYLA 380 (388)
T ss_dssp SSTTCCCCEECTTSSEEEEEEC----------TTSSCEEEEE
T ss_pred cccCCCCccCCCCCCEEEEEec----------CCCceeEEEE
Confidence 0001467899999999998764 3677777754
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.87 E-value=4.2e-19 Score=173.29 Aligned_cols=272 Identities=11% Similarity=0.109 Sum_probs=185.3
Q ss_pred EEEEEeeccEEEEe---------eCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeee
Q 011970 91 VIEIVAARDIVFAL---------AHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCR 161 (474)
Q Consensus 91 V~~i~~s~~~las~---------s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~ 161 (474)
|.+..+.|+.||.. ..++.+.+|++.+|+.. .| ..+.+++|||||+.|+.++..+... -.
T Consensus 17 ~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l-----~~~~~~~~SpDg~~la~~~~~~~~~-----~~ 85 (347)
T 2gop_A 17 LSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI-----ENATMPRISPDGKKIAFMRANEEKK-----VS 85 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE-----ESCEEEEECTTSSEEEEEEEETTTT-----EE
T ss_pred cccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec-----ccCCCeEECCCCCEEEEEEeccCCC-----cc
Confidence 33333356666543 23778999999988753 44 3478999999999999987543211 14
Q ss_pred EEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCC---------------------------CcEEEee
Q 011970 162 STKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD---------------------------SIYKVFD 214 (474)
Q Consensus 162 ~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D---------------------------~tiKlWd 214 (474)
.+.++++..|+.. .+.... . +..++|+ |||+.|++++.+ ..|.+||
T Consensus 86 ~l~~~~~~~g~~~---~l~~~~--~-~~~~~ws-pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 86 EIWVADLETLSSK---KILEAK--N-IRSLEWN-EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp EEEEEETTTTEEE---EEEEES--E-EEEEEEC-TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred eEEEEECCCCceE---EEEcCC--C-ccceeEC-CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 5677787777652 244432 2 6689998 799999988743 5799999
Q ss_pred cCCCeEEEEEcCCcEEEEEEcCCceEEEEecCCCC----c-cEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEE
Q 011970 215 LKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSH----V-PLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK 289 (474)
Q Consensus 215 l~tg~~l~tl~~~~V~~vafSpg~~la~~s~~s~D----~-tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~ 289 (474)
+.+|+++..+....+..++|||++ ++..+....+ . ..+||.+.+|++. .+..+ ..+..+ .|+|.+|+..
T Consensus 159 ~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~~---spdg~~l~~~ 232 (347)
T 2gop_A 159 TESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYAV---DSDGERILLY 232 (347)
T ss_dssp TTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEEE---EECSSCEEEE
T ss_pred CCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-EeccC-cceeeE---CCCCCEEEEE
Confidence 999987444432278899999977 4444322211 2 4455555477654 44433 444444 4788888886
Q ss_pred eCC--------CcEEEEECCCCceEEeccccCCceEE-EEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCC
Q 011970 290 QEN--------ENLQILDVRNAELMEVSRTEFMTPSA-FIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPD 358 (474)
Q Consensus 290 ~~D--------~tIkIWDv~tg~~~~~l~~h~~~v~s-v~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~ 358 (474)
+.+ ..|.+|| ++++.++..+|...+.. ++|+ || ++++++ |++++|| ++ |++...+. +...
T Consensus 233 ~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~-~~~~--- 303 (347)
T 2gop_A 233 GKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK-GRHW--- 303 (347)
T ss_dssp ECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEEC-SSSE---
T ss_pred EccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec-CCCe---
Confidence 633 4678888 78887777777778886 8999 98 888888 9999999 84 88755544 3433
Q ss_pred CCeeEEEECCCCCEEEEEecCCCccccccCCCCeE-EEEeCCCCeEEEEecCCCC
Q 011970 359 CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSI-NVSSILTGKCLAKINATNC 412 (474)
Q Consensus 359 ~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtI-klWdi~tG~cl~tl~gH~~ 412 (474)
|.+++|+| .++++++. +++. +||.+. |+ +..|..|+.
T Consensus 304 --v~~~~~s~--~~~~~~~~-----------~~~~~~l~~~~-g~-~~~lt~~n~ 341 (347)
T 2gop_A 304 --IMGFDVDE--IVVYLKET-----------ATRLRELFTWD-GE-EKQLTDYND 341 (347)
T ss_dssp --EEEEEESS--SEEEEEEC-----------SSSCCEEEEES-SS-EEECCCTTS
T ss_pred --EEeeeeeC--cEEEEEcC-----------CCChHHheEeC-Cc-EEEeccccH
Confidence 78999999 77777764 4544 788876 76 566887763
No 172
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.3e-21 Score=203.24 Aligned_cols=213 Identities=8% Similarity=-0.017 Sum_probs=159.2
Q ss_pred CcEEEeecCCCeEEEEEcCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCC----------eEEEEEe-----ecCc
Q 011970 208 SIYKVFDLKNYTMLYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG----------TVLKVFY-----HLLH 271 (474)
Q Consensus 208 ~tiKlWdl~tg~~l~tl~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG----------~~L~tl~-----~h~~ 271 (474)
+.+|+|+... . +....+..++++| ++.+++++. |+ ++||+..+- ..+..+. .|..
T Consensus 23 ~~vri~~~~~-~----~~~~~~n~lavs~~~~~l~~~~~---dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPE-E----LPKERSSLLAVSNKYGLVFAGGA---SG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKF 93 (434)
T ss_dssp CEEECSCCCS-S----CCCSCCBCEEEETTTTEEEEEET---TE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSS
T ss_pred eeEEecCCcc-c----cCCCCccEEEEecCCCEEEEECC---CE-EEEEEchHhhhhcccccCcccccccCccccccCCC
Confidence 4689997431 1 3445678899997 667776532 44 999875321 0111111 2345
Q ss_pred ceeEEEEEecCCCeEE----EEeCCCcEEEEECCCC--------c---eEEeccccCCceEEEEEcCC-CcEEEEEc-CC
Q 011970 272 RNKKVDFIEQFNEKLL----VKQENENLQILDVRNA--------E---LMEVSRTEFMTPSAFIFLYE-NQLFLTFR-NR 334 (474)
Q Consensus 272 ~v~~V~F~~~~~~~ll----~~~~D~tIkIWDv~tg--------~---~~~~l~~h~~~v~sv~Fspd-g~llaS~s-D~ 334 (474)
.+..++|+ +++..|+ +++.|++|+|||+.++ + .+..+.+|...|.+++|+|+ +++|++++ |+
T Consensus 94 ~v~~l~~s-pdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALS-CDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEEC-TTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred cccEEEEc-CCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 69999998 6777888 5678999999999876 2 25678889999999999998 89999999 99
Q ss_pred cEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCC
Q 011970 335 TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCS 413 (474)
Q Consensus 335 tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~ 413 (474)
+|+|||++ ++++....+|... |.+++|+|||++||+|+. ||+|++||+. |+...++..|...
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~-----v~~v~wspdg~~lasgs~-----------dg~v~iwd~~-~~~~~~~~~~~~~ 235 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVA-----VTSVCWSPKGKQLAVGKQ-----------NGTVVQYLPT-LQEKKVIPCPPFY 235 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGC-----EEEEEECTTSSCEEEEET-----------TSCEEEECTT-CCEEEEECCCTTC
T ss_pred eEEEEEcCCCcceeeccCCCCc-----eeEEEEcCCCCEEEEEcC-----------CCcEEEEccC-CcccccccCCccc
Confidence 99999995 8787778888765 799999999999999987 9999999987 8888888877530
Q ss_pred CCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEE-EcCCCc------EEEccC
Q 011970 414 PKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYT-GNRHGL------VHVWSN 474 (474)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaS-gs~Dgt------VklWd~ 474 (474)
. .++-..|.++.|+|++.++++ ++.||. +++|+.
T Consensus 236 -~--------------------------~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 236 -E--------------------------SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp -C--------------------------TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEEC
T ss_pred -C--------------------------CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEe
Confidence 0 000117999999999998854 334543 888873
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.86 E-value=4.6e-19 Score=173.05 Aligned_cols=266 Identities=12% Similarity=0.101 Sum_probs=182.2
Q ss_pred ceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCC--
Q 011970 130 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-- 207 (474)
Q Consensus 130 ~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D-- 207 (474)
..+.++.+ ||+.|+.+....... ..-....+.+|++..|+.. .+ ..+..++|| |||+.||+.+.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~-~~~~~~~l~~~d~~~~~~~---~l------~~~~~~~~S-pDg~~la~~~~~~~ 81 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLK-DNKYENTIVIENLKNNARR---FI------ENATMPRIS-PDGKKIAFMRANEE 81 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETT-TTEEEEEEEEEETTTCCEE---EE------ESCEEEEEC-TTSSEEEEEEEETT
T ss_pred EEcccceE--CCcEEEEEEeecCcc-cCCccceEEEEeCCCCceE---Ec------ccCCCeEEC-CCCCEEEEEEeccC
Confidence 45777788 999988765322110 0011267788888877741 22 234578998 799999988764
Q ss_pred -C--cEEEeecCCCeEEEEEcCCcEEEEEEcCCc-eEEEEecC------------------------CCCccEEEEecCC
Q 011970 208 -S--IYKVFDLKNYTMLYSISDKHVQEIKISPGI-MLLIFNRS------------------------SSHVPLKILSIED 259 (474)
Q Consensus 208 -~--tiKlWdl~tg~~l~tl~~~~V~~vafSpg~-~la~~s~~------------------------s~D~tIkLWdi~t 259 (474)
+ .|.+||+++|+.........+..++|||++ .|+..+.. .....|.+||+.+
T Consensus 82 ~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 82 KKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp TTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred CCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 3 377889999886554432229999999854 56655421 0135799999999
Q ss_pred CeEEEEEeecCcceeEEEEEecCCCeEEEEeCC------C-cEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc
Q 011970 260 GTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN------E-NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR 332 (474)
Q Consensus 260 G~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D------~-tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s 332 (474)
|++++.+.. . .+..++|+ |++ .++++..+ . ..+||.+.++++..... + ..+.++ ||||+.|+..+
T Consensus 162 ~~~~~~l~~-~-~~~~~~~s-pdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~-~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 162 EEVIEEFEK-P-RFSSGIWH-RDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFE-K-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp TEEEEEEEE-E-TTCEEEEE-TTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEE-E-ESEEEE--EECSSCEEEEE
T ss_pred CeEEeeecC-C-CcccccCC-CCe-EEEEEecccccccccccccEEEeCCCceEEecc-C-cceeeE--CCCCCEEEEEE
Confidence 998677765 3 78889998 555 44445443 2 45666555776655433 3 445544 99999888766
Q ss_pred -CC--------cEEEEeCCCcEEEEeccCCCCcCCCCeeE-EEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe
Q 011970 333 -NR--------TVAVWNFRGELVTSFEDHLLWHPDCNTNN-IYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 402 (474)
Q Consensus 333 -D~--------tIklWd~~G~ll~tl~gH~~~~~~~~v~s-vafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~ 402 (474)
+. .|.+|| .|++...+.+|... +.+ ++|+ || ++++++. |++++|| +.+|+
T Consensus 234 ~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~-----~~~~~~~s-dg-~~~~~~~-----------~~~~~l~-~~~g~ 293 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYD-GKEVMGILDEVDRG-----VGQAKIKD-GK-VYFTLFE-----------EGSVNLY-IWDGE 293 (347)
T ss_dssp CCSSSCCCSSCEEEEEC-SSCEEESSTTCCSE-----EEEEEEET-TE-EEEEEEE-----------TTEEEEE-EESSS
T ss_pred ccccCCccccceEEEEC-CCceEeccccCCcc-----cCCccEEc-Cc-EEEEEec-----------CCcEEEE-EcCCc
Confidence 43 677888 78876666666554 565 8999 99 9998876 8999999 88888
Q ss_pred EEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcE-EEcc
Q 011970 403 CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLV-HVWS 473 (474)
Q Consensus 403 cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtV-klWd 473 (474)
+...+ .+.. .|.+++|+| ..+++++.+++. +||.
T Consensus 294 ~~~~~-~~~~----------------------------------~v~~~~~s~--~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 294 IKPIA-KGRH----------------------------------WIMGFDVDE--IVVYLKETATRLRELFT 328 (347)
T ss_dssp EEEEE-CSSS----------------------------------EEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred eEEEe-cCCC----------------------------------eEEeeeeeC--cEEEEEcCCCChHHheE
Confidence 75544 3443 789999999 788888887765 7774
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=4e-19 Score=169.90 Aligned_cols=241 Identities=11% Similarity=0.194 Sum_probs=179.3
Q ss_pred CCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceee--eccccCceEEEEeCCCCeEEEEec
Q 011970 128 PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE--SESLKWPGFVEFDDVNGKVLTYSA 205 (474)
Q Consensus 128 ~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~--~~~~~~~~~V~Fs~~nGk~LaS~s 205 (474)
+-....+|+++|+|+.+++.+ .+ ..+.+|+.. |+....+.... ..+...|..++|++++|+++++..
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~----~~------~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~ 96 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADT----NN------HRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER 96 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEG----GG------TEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEEC----CC------CEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC
Confidence 335689999999999777532 33 578888854 66422111100 123456889999657999888875
Q ss_pred C-CCcEEEeecCCCeEEEEEcC---CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEe--ecCcceeEEEEE
Q 011970 206 Q-DSIYKVFDLKNYTMLYSISD---KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFI 279 (474)
Q Consensus 206 ~-D~tiKlWdl~tg~~l~tl~~---~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~--~h~~~v~~V~F~ 279 (474)
. ++.|++|| .+|+.+.++.. ..+..|+|+|++.+.++. ..++.|.+||. +|+.+.++. .+......|+|.
T Consensus 97 ~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~--~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~ 172 (286)
T 1q7f_A 97 SPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVE--CKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVN 172 (286)
T ss_dssp GGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEE--TTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEEC
T ss_pred CCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEE--CCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEEC
Confidence 4 89999999 67888887742 478999999866666653 34678999995 688888885 344567889986
Q ss_pred ecCCCeEEEE-eCCCcEEEEECCCCceEEeccc--cCCceEEEEEcCCCcEEEEEc-CC-cEEEEeCCCcEEEEeccCCC
Q 011970 280 EQFNEKLLVK-QENENLQILDVRNAELMEVSRT--EFMTPSAFIFLYENQLFLTFR-NR-TVAVWNFRGELVTSFEDHLL 354 (474)
Q Consensus 280 ~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~--h~~~v~sv~Fspdg~llaS~s-D~-tIklWd~~G~ll~tl~gH~~ 354 (474)
+ ++ .+.++ ..++.|++||. +++.+..+.. +...+..++|+|+|+++++.. ++ +|.+||.+|+.+.++..|..
T Consensus 173 ~-~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~ 249 (286)
T 1q7f_A 173 D-KQ-EIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVK 249 (286)
T ss_dssp S-SS-EEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSC
T ss_pred C-CC-CEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCC
Confidence 4 44 45554 67999999996 5666665543 457899999999999999998 75 99999998999999987654
Q ss_pred CcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCC
Q 011970 355 WHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG 401 (474)
Q Consensus 355 ~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG 401 (474)
.. ...+++|+|||+++++ +. |++|++|++...
T Consensus 250 ~~---~~~~i~~~~~g~l~vs-~~-----------~~~v~v~~~~~~ 281 (286)
T 1q7f_A 250 HA---QCFDVALMDDGSVVLA-SK-----------DYRLYIYRYVQL 281 (286)
T ss_dssp CS---CEEEEEEETTTEEEEE-ET-----------TTEEEEEECSCC
T ss_pred CC---cceeEEECCCCcEEEE-CC-----------CCeEEEEEcccc
Confidence 21 2578999999999887 44 899999997543
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=3.7e-19 Score=176.09 Aligned_cols=239 Identities=10% Similarity=0.086 Sum_probs=185.7
Q ss_pred ccEEEEEee--ccEEEEeeCC------------------------CeEEeeeccccceeeEeecCCCceEEEEEEeeCCC
Q 011970 89 TKVIEIVAA--RDIVFALAHS------------------------GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNND 142 (474)
Q Consensus 89 ~~V~~i~~s--~~~las~s~d------------------------gtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~ 142 (474)
..|..|+++ |+++++.+.+ +++.+||..+|+.+..+...+-.....|+++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 568889998 8899888888 58999999999998877644556789999999999
Q ss_pred EEEEEEeecCCCccceeeeEEEEeEeccCC--CCCccce-----eeeccccCceEEEEeCCCCeEEEEec-CCCcEEEee
Q 011970 143 SLITVSVYASDNFSSLKCRSTKIEYIRRGK--PDSGFAL-----FESESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFD 214 (474)
Q Consensus 143 ~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~--~~~~~~l-----f~~~~~~~~~~V~Fs~~nGk~LaS~s-~D~tiKlWd 214 (474)
.+++. ..+ +.+.+|+ ..|+ ....+.- ...+++..|..|+|++.+|+++++.+ .++.|++||
T Consensus 104 l~v~d----~~~------~~v~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~ 172 (329)
T 3fvz_A 104 YWVTD----VAL------HQVFKLD-PHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS 172 (329)
T ss_dssp EEEEE----TTT------TEEEEEC-TTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred EEEEE----CCC------CEEEEEe-CCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence 77652 234 5788888 4555 2211100 00234667889999833899999997 799999999
Q ss_pred cCCCeEEEEEc--C----------CcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEEEEe--ecCcceeEEEEE
Q 011970 215 LKNYTMLYSIS--D----------KHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFI 279 (474)
Q Consensus 215 l~tg~~l~tl~--~----------~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~--~h~~~v~~V~F~ 279 (474)
.+|+++.++. + .....|+|+|+ +.|.++. ..+..|++||.++|+++.++. .+....+.++|.
T Consensus 173 -~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d--~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 249 (329)
T 3fvz_A 173 -PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD--RENGRIQCFKTDTKEFVREIKHASFGRNVFAISYI 249 (329)
T ss_dssp -TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE--TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEE
T ss_pred -CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE--CCCCEEEEEECCCCcEEEEEeccccCCCcceeeec
Confidence 6888888774 1 24899999985 7777774 446899999999999999995 345678899987
Q ss_pred ecCCCeEEEE-e-------CCCcEEEEECCCCceEEec---cccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCCCc
Q 011970 280 EQFNEKLLVK-Q-------ENENLQILDVRNAELMEVS---RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGE 344 (474)
Q Consensus 280 ~~~~~~ll~~-~-------~D~tIkIWDv~tg~~~~~l---~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~G~ 344 (474)
| +.++.. + .+.+|++||+.+|+++.++ .++...+..++|+|||+++++.. +++|++|+++|+
T Consensus 250 p---g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 250 P---GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp T---TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred C---CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 4 333332 2 3569999999999999887 47888999999999999999998 999999998653
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=8.7e-20 Score=179.80 Aligned_cols=259 Identities=9% Similarity=0.044 Sum_probs=169.0
Q ss_pred ccEEEEeeCC---CeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCC
Q 011970 98 RDIVFALAHS---GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD 174 (474)
Q Consensus 98 ~~~las~s~d---gtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~ 174 (474)
|+.||..+.. ..+.+|++.+|+...... .+......++|||||+.|+.++ .+ .++.+|++..|+..
T Consensus 47 G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~~----~~------~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 47 GKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-GKGDNTFGGFISTDERAFFYVK----NE------LNLMKVDLETLEEQ 115 (396)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTTEEEECCC-SSCBCTTTCEECTTSSEEEEEE----TT------TEEEEEETTTCCEE
T ss_pred CCEEEEEEecCCCceEEEEECCCCcEEEeec-CCCCccccceECCCCCEEEEEE----cC------CcEEEEECCCCCcE
Confidence 7877766543 367888988887654433 2433334488999999998876 33 36889998888752
Q ss_pred CccceeeeccccCceE-------------------EEEeCCCCeEEEEe-----cCCCcEEEeecCCCeEEEEEc-CCcE
Q 011970 175 SGFALFESESLKWPGF-------------------VEFDDVNGKVLTYS-----AQDSIYKVFDLKNYTMLYSIS-DKHV 229 (474)
Q Consensus 175 ~~~~lf~~~~~~~~~~-------------------V~Fs~~nGk~LaS~-----s~D~tiKlWdl~tg~~l~tl~-~~~V 229 (474)
.++.. +..|... ++|+ |||+.|+.. ..+..|.+||++++++..... ...+
T Consensus 116 ---~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~s-pdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~ 190 (396)
T 3c5m_A 116 ---VIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQ-PLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWL 190 (396)
T ss_dssp ---EEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCC-CCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCE
T ss_pred ---EEEec-ccccCCCCCEEEeccCCccccccccccccC-CCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCccc
Confidence 23331 1122111 3455 677777654 467789999999998655443 4679
Q ss_pred EEEEEcC-Cc-eEEEEecCCCC----ccEEEEecCCCeEEEEEeec-CcceeEEEEEecCCCeEEEEeCC-----CcEEE
Q 011970 230 QEIKISP-GI-MLLIFNRSSSH----VPLKILSIEDGTVLKVFYHL-LHRNKKVDFIEQFNEKLLVKQEN-----ENLQI 297 (474)
Q Consensus 230 ~~vafSp-g~-~la~~s~~s~D----~tIkLWdi~tG~~L~tl~~h-~~~v~~V~F~~~~~~~ll~~~~D-----~tIkI 297 (474)
..++||| ++ .|+..+. ... ..|.+||+.+++......+. ...+..++|+ |++.+|+..+.+ ++|.+
T Consensus 191 ~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWI-PDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp EEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEEC-TTSSCEEEEEEETTTCCEEEEE
T ss_pred ccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeeccCCCccccceEEC-CCCCEEEEEecCCCCccceEEE
Confidence 9999999 44 4655543 222 46899998776543333321 2356778987 678878776533 45999
Q ss_pred EECCCCceEEeccccCCceEEEEEcC-CCcEEEEEc-----------------CCcEEEEeCC-CcEEEEeccCCCCc--
Q 011970 298 LDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-----------------NRTVAVWNFR-GELVTSFEDHLLWH-- 356 (474)
Q Consensus 298 WDv~tg~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s-----------------D~tIklWd~~-G~ll~tl~gH~~~~-- 356 (474)
||+.+++...+.... ... ++|+| ||+++++++ +..|.+||+. |++ +.+..|....
T Consensus 269 ~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~ 344 (396)
T 3c5m_A 269 ANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDV 344 (396)
T ss_dssp ECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCC
T ss_pred EECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCcccc
Confidence 999999876543221 122 88999 999998753 3789999996 654 4555554310
Q ss_pred ----CCCCeeEEEECCCCCEEEEEec
Q 011970 357 ----PDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 357 ----~~~~v~svafSpDg~~LaS~s~ 378 (474)
....+..++|+|||+.|+..+.
T Consensus 345 ~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 345 LDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp BTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred ccccccCCCCCceEccCCCeEEEEec
Confidence 0001356789999999998764
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=6.2e-19 Score=188.36 Aligned_cols=284 Identities=7% Similarity=-0.028 Sum_probs=186.3
Q ss_pred eecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCce---------EEEEe
Q 011970 124 LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPG---------FVEFD 194 (474)
Q Consensus 124 l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~---------~V~Fs 194 (474)
|.+ |...|.+++|++++- +-++...+.+ ...+||....+.... .+..+. ..+. .+.|+
T Consensus 19 ~~~-~~~~~~~~~~s~~~~--~~~~~~~~~~------~~~~l~~~~~~~~~~--~l~~~~--~~~~~~~~~~~~~~~~~~ 85 (662)
T 3azo_A 19 VAS-RSGRPACVGAVGDEV--WWVAPRPAEA------GRATLVRRRADGAEE--SALPAP--WNVRNRVFEYSGFPWAGV 85 (662)
T ss_dssp HHH-TCSCCEEEEEETTEE--EEEEEETTTT------TEEEEEEECTTSCEE--ESSCTT--CCBCCCGGGTCCCCEEEE
T ss_pred Hhh-cCCccceeEEcCCeE--EEEecCcccC------CcEEEEEECCCCCcc--eeCCCC--ccccccccccCCccceee
Confidence 444 567899999997654 4444322344 567888864332211 111111 1111 34565
Q ss_pred C-CCCeE-EEEecC-CCcEEEeecC--C-CeEEEEEc-------CCcEEEEEEcCC-ceEEEEecC-------CCCccEE
Q 011970 195 D-VNGKV-LTYSAQ-DSIYKVFDLK--N-YTMLYSIS-------DKHVQEIKISPG-IMLLIFNRS-------SSHVPLK 253 (474)
Q Consensus 195 ~-~nGk~-LaS~s~-D~tiKlWdl~--t-g~~l~tl~-------~~~V~~vafSpg-~~la~~s~~-------s~D~tIk 253 (474)
. |||+. ||+++. +..|.+||+. + ++ ...+. ...+.+++|||+ ..|+..+.. ....+|+
T Consensus 86 ~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 86 PRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp CCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEE
T ss_pred eecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEE
Confidence 2 89998 887764 4556666655 2 44 34443 246889999985 556655432 1115899
Q ss_pred EEecCC------CeEEEEEe-ecCcceeEEEEEecCCCeEEEEeCC--------CcEEEEECC-CC---ceEEeccccCC
Q 011970 254 ILSIED------GTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQEN--------ENLQILDVR-NA---ELMEVSRTEFM 314 (474)
Q Consensus 254 LWdi~t------G~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~~D--------~tIkIWDv~-tg---~~~~~l~~h~~ 314 (474)
+||+.+ |++. .+. .+...+..++|+ |+|.+|+..+.| .+|.+||+. +| ++..+..+|..
T Consensus 165 ~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~S-pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~ 242 (662)
T 3azo_A 165 AVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLS-PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE 242 (662)
T ss_dssp EEETTSTTTTCGGGSE-ESSCSCSSEECCCEEC-TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB
T ss_pred EEECCCCccccCCcee-EEEecCCCcccCceEC-CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc
Confidence 999988 6654 454 445677889997 788888887644 379999999 68 66666666778
Q ss_pred ceEEEEEcCCCcEEEEEc-CC--cEEEEeC-CCcEEEEeccCCC-----CcCCCCeeEEEECCCCCEEEEEecCCCcccc
Q 011970 315 TPSAFIFLYENQLFLTFR-NR--TVAVWNF-RGELVTSFEDHLL-----WHPDCNTNNIYITSDQDLIISYCKAEPEDQW 385 (474)
Q Consensus 315 ~v~sv~Fspdg~llaS~s-D~--tIklWd~-~G~ll~tl~gH~~-----~~~~~~v~svafSpDg~~LaS~s~~~~~~~~ 385 (474)
.+..++|+|||+++++++ |+ .|.+||. .|++.+.+.+|.. |.++ +..++|+|||+++++++
T Consensus 243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~--~~~~~~~~~~~~~~~~~-------- 312 (662)
T 3azo_A 243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPG--MRWFAPLANGLIAVVHG-------- 312 (662)
T ss_dssp CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTT--CCSEEECTTSCEEEEEB--------
T ss_pred eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCcccccc--CceEeEeCCCEEEEEEE--------
Confidence 899999999999888887 88 5556666 3776554444332 2221 45799999999999864
Q ss_pred ccCCCCeEEEE--eCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEE-EEcCCCCEEEE
Q 011970 386 MEGSAGSINVS--SILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSL-FYDEERNEIYT 462 (474)
Q Consensus 386 ~~s~DgtIklW--di~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl-afSpDg~~LaS 462 (474)
. ++++|| |+.+|+ +++|..|.. .|.++ ++++++-.+++
T Consensus 313 ---~-~~~~l~~~d~~~~~-~~~l~~~~~----------------------------------~~~~~~s~~~~~~~~~~ 353 (662)
T 3azo_A 313 ---K-GAAVLGILDPESGE-LVDAAGPWT----------------------------------EWAATLTVSGTRAVGVA 353 (662)
T ss_dssp ---S-SSCEEEEEETTTTE-EEECCSSCC----------------------------------EEEEEEEEETTEEEEEE
T ss_pred ---c-CccEEEEEECCCCc-EEEecCCCC----------------------------------eEEEEEecCCCEEEEEE
Confidence 3 788999 765555 788888864 67766 56555555667
Q ss_pred EcCCCcEEEc
Q 011970 463 GNRHGLVHVW 472 (474)
Q Consensus 463 gs~DgtVklW 472 (474)
++.+....||
T Consensus 354 ~~~~~~~~i~ 363 (662)
T 3azo_A 354 ASPRTAYEVV 363 (662)
T ss_dssp EETTEEEEEE
T ss_pred cCCCCCCEEE
Confidence 7777766666
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.83 E-value=1.2e-18 Score=189.60 Aligned_cols=283 Identities=11% Similarity=0.074 Sum_probs=196.3
Q ss_pred ccEEEEeeCCC---eEEeeecc--ccceeeEeec-----CCCceEEEEEEeeCCCEEEEEEe-ecCCCccceeeeEEEEe
Q 011970 98 RDIVFALAHSG---VCAAFSRE--TNRRICFLNV-----SPDEVIRSLFYNKNNDSLITVSV-YASDNFSSLKCRSTKIE 166 (474)
Q Consensus 98 ~~~las~s~dg---tiklW~~~--tg~~l~~l~g-----~~~~~i~sv~fspdg~~Lis~S~-~~s~d~s~Lk~~~~~iw 166 (474)
|+.++-...++ .-.||-+. .|+.-..+.. .|...+.+++|||||+.||.++. .|+++ .++++|
T Consensus 79 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~------~~i~v~ 152 (695)
T 2bkl_A 79 NGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADE------AVLHVI 152 (695)
T ss_dssp TTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSC------CEEEEE
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCce------EEEEEE
Confidence 67776666554 45666543 4443323321 24457999999999999986554 45556 789999
Q ss_pred EeccCCCCCccceeeeccccCc--eEEEEeCCCCeEEEEecCCCc-------------EEEeecCCCe----EEEEEcC-
Q 011970 167 YIRRGKPDSGFALFESESLKWP--GFVEFDDVNGKVLTYSAQDSI-------------YKVFDLKNYT----MLYSISD- 226 (474)
Q Consensus 167 ~i~~G~~~~~~~lf~~~~~~~~--~~V~Fs~~nGk~LaS~s~D~t-------------iKlWdl~tg~----~l~tl~~- 226 (474)
|+.+|+.... .++.++ ..++|+ |||+.|++++.|.+ |++|++.+++ +++...+
T Consensus 153 dl~tg~~~~~------~~~~~~~~~~~~ws-pDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~ 225 (695)
T 2bkl_A 153 DVDSGEWSKV------DVIEGGKYATPKWT-PDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD 225 (695)
T ss_dssp ETTTCCBCSS------CCBSCCTTCCCEEC-TTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC
T ss_pred ECCCCCCcCC------cccCcccccceEEe-cCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC
Confidence 9999986310 012222 479998 79999999999887 9999999886 5555543
Q ss_pred -CcEEEEEEcC-CceEEEEecCC-CCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEe----CCCcEEEEE
Q 011970 227 -KHVQEIKISP-GIMLLIFNRSS-SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ----ENENLQILD 299 (474)
Q Consensus 227 -~~V~~vafSp-g~~la~~s~~s-~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~----~D~tIkIWD 299 (474)
..+.+++||| |..|++.+... ....|.+||..+|+ ++.+..+...+..+.+ ++++ +++.+ .++.|.+||
T Consensus 226 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~--~~g~-l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 226 PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA--WKDR-FYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE--ETTE-EEEEECTTCTTCEEEEEB
T ss_pred CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe--cCCc-EEEEECCCCCCCEEEEEe
Confidence 4789999998 55565554322 23468888877775 4455555555666665 4556 66654 368999999
Q ss_pred CCCCce---EEecccc-CCceEEEEEcCCCcEEEEEc-CCcEEEEeC--CCcEEEEeccC-CCCcCCCCeeEEEECCCCC
Q 011970 300 VRNAEL---MEVSRTE-FMTPSAFIFLYENQLFLTFR-NRTVAVWNF--RGELVTSFEDH-LLWHPDCNTNNIYITSDQD 371 (474)
Q Consensus 300 v~tg~~---~~~l~~h-~~~v~sv~Fspdg~llaS~s-D~tIklWd~--~G~ll~tl~gH-~~~~~~~~v~svafSpDg~ 371 (474)
+.+++. ..+..++ ...+..++|+ +++++++.+ |++.+||.+ +|+.++.+..+ ... |..++++|||+
T Consensus 302 ~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~-----v~~~~~s~d~~ 375 (695)
T 2bkl_A 302 PAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGA-----ASNLMGLEDLD 375 (695)
T ss_dssp TTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSE-----ECCCBSCTTCS
T ss_pred CCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeE-----EEEeecCCCCC
Confidence 998863 4444444 5567888888 888999988 999999876 48888888765 333 57788999998
Q ss_pred EEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCC
Q 011970 372 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 411 (474)
Q Consensus 372 ~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~ 411 (474)
.|+-...+ ....++|.+||+.+|+ +..|+.+.
T Consensus 376 ~l~~~~ss-------~~~P~~v~~~d~~~g~-~~~l~~~~ 407 (695)
T 2bkl_A 376 DAYYVFTS-------FTTPRQIYKTSVSTGK-SELWAKVD 407 (695)
T ss_dssp EEEEEEEE-------TTEEEEEEEEETTTCC-EEEEEECC
T ss_pred EEEEEEcC-------CCCCCEEEEEECCCCc-EEEEecCC
Confidence 77733221 2347899999999988 45666654
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=1e-18 Score=176.55 Aligned_cols=265 Identities=14% Similarity=0.108 Sum_probs=180.5
Q ss_pred eEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec----------CCCcEEEeecCCCeEEEEEc-----
Q 011970 161 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QDSIYKVFDLKNYTMLYSIS----- 225 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s----------~D~tiKlWdl~tg~~l~tl~----- 225 (474)
.++.+||..+|++...+ ..+ ..| .++|+ |||++|..+. .|++|.+||+.+++.+.++.
T Consensus 31 ~~v~v~D~~t~~~~~~i---~~g--~~p-~i~~s-pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 31 SRVHVYDYTNGKFLGMV---PTA--FNG-HVQVS-NDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR 103 (361)
T ss_dssp CEEEEEETTTCCEEEEE---ECC--EEE-EEEEC-TTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB
T ss_pred CeEEEEECCCCeEEEEe---cCC--CCC-ceEEC-CCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc
Confidence 68899999999874322 211 234 89998 7999888775 36789999999999988875
Q ss_pred ---CCcEEEEEEcCCc-eEEEEecCCCCccEEEEecCCCeEEEE-EeecCcceeEEEEEecCCCeEEEEeCCCcEEEEEC
Q 011970 226 ---DKHVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTVLKV-FYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDV 300 (474)
Q Consensus 226 ---~~~V~~vafSpg~-~la~~s~~s~D~tIkLWdi~tG~~L~t-l~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv 300 (474)
+.....++|||++ +|+++.. +.+.+|.+||+++++.+.+ +... ....+.+.|.....+++.+.|+.+.+|++
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~-~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNA-SPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEE-SSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred cccCCCcceEEECCCCCEEEEECC-CCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 1346679999854 5555532 2357899999999999998 6532 22445555332345666789999999998
Q ss_pred CC-CceEE------eccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-Cc--EEEEec------cCCCCcCCCCeeE
Q 011970 301 RN-AELME------VSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE--LVTSFE------DHLLWHPDCNTNN 363 (474)
Q Consensus 301 ~t-g~~~~------~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~--ll~tl~------gH~~~~~~~~v~s 363 (474)
.. ++... ++..+.. +..+.++|++..++..+ +++|.++|+. ++ .+.+++ .+..|.+.. ...
T Consensus 181 ~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g-~~~ 258 (361)
T 2oiz_A 181 GEDGKVASQSRSKQMFSVKDD-PIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGG-YNL 258 (361)
T ss_dssp CTTSSEEEEEECCCCSCTTTS-CBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECC-SSC
T ss_pred CCCCcEeeeccccceEcCCCC-ceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCC-eeE
Confidence 75 66652 2222222 22345678888877777 9999999995 33 233332 122232211 123
Q ss_pred EEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccc
Q 011970 364 IYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGE 443 (474)
Q Consensus 364 vafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (474)
++|+|||+.+..++.....+......+++|.+||+.|++.++++..|.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-------------------------------- 306 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-------------------------------- 306 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--------------------------------
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--------------------------------
Confidence 899999888776542000000000124689999999999999998764
Q ss_pred cccCEEEEEEcCCCCEEEEEcCCCcEEEccC
Q 011970 444 ALEDITSLFYDEERNEIYTGNRHGLVHVWSN 474 (474)
Q Consensus 444 ~l~~V~slafSpDg~~LaSgs~DgtVklWd~ 474 (474)
+++++|||||++||+++. ++|.+||.
T Consensus 307 ----p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 307 ----ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp ----CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred ----eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 357999999999999997 99999983
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=9.7e-18 Score=161.67 Aligned_cols=227 Identities=11% Similarity=0.089 Sum_probs=166.2
Q ss_pred ccCceEEEEeCCCCe-EEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEE
Q 011970 185 LKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 263 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk-~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L 263 (474)
..++..++|+ |+|+ +++++..++.|.+||.+++...+......+..++|+|++.|+++. ..+..|.+||.++|++.
T Consensus 27 ~~~~eg~~~d-~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~--~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 27 FTWTEGPVYV-PARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACS--HGLRRLERQREPGGEWE 103 (296)
T ss_dssp CSSEEEEEEE-GGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEE--TTTTEEEEECSTTCCEE
T ss_pred CccccCCeEe-CCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEe--cCCCeEEEEcCCCCcEE
Confidence 5677799998 7887 888899999999999988722223345679999999866666654 33578999999999876
Q ss_pred EEEeec----CcceeEEEEEecCCCeEEE----Ee-------------CCCcEEEEECCCCceEEeccccCCceEEEEEc
Q 011970 264 KVFYHL----LHRNKKVDFIEQFNEKLLV----KQ-------------ENENLQILDVRNAELMEVSRTEFMTPSAFIFL 322 (474)
Q Consensus 264 ~tl~~h----~~~v~~V~F~~~~~~~ll~----~~-------------~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fs 322 (474)
..+... ......++|. ++|..+++ +. ..+.|..+|.. ++. ..+..+...+..++|+
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d-~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s 180 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLA-PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFL 180 (296)
T ss_dssp EEECEETTEECCCCCCEEEC-TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEEC
T ss_pred EEeeccCCCCCCCCCCEEEC-CCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEEC
Confidence 544322 2244678886 45544443 22 12344445544 554 3445667788999999
Q ss_pred CCCcEEEEEc-CCcEEEEeCC--CcE---EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEE
Q 011970 323 YENQLFLTFR-NRTVAVWNFR--GEL---VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVS 396 (474)
Q Consensus 323 pdg~llaS~s-D~tIklWd~~--G~l---l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklW 396 (474)
|||+++++.+ +++|.+||++ |++ ...+..+... ...++|+|||++.++. ++.|.+|
T Consensus 181 ~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-----p~~i~~d~~G~l~v~~-------------~~~v~~~ 242 (296)
T 3e5z_A 181 PSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGK-----TDGLRVDAGGLIWASA-------------GDGVHVL 242 (296)
T ss_dssp TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSC-----CCSEEEBTTSCEEEEE-------------TTEEEEE
T ss_pred CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCC-----CCeEEECCCCCEEEEc-------------CCeEEEE
Confidence 9999987777 8999999983 776 4555333322 4689999999998874 5789999
Q ss_pred eCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEE-cCCCCEEEEEcCCCcEEE
Q 011970 397 SILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFY-DEERNEIYTGNRHGLVHV 471 (474)
Q Consensus 397 di~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slaf-SpDg~~LaSgs~DgtVkl 471 (474)
|. .|+++.++..+. .+++++| +||++.|+.++.++.+++
T Consensus 243 ~~-~g~~~~~~~~~~-----------------------------------~~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 243 TP-DGDELGRVLTPQ-----------------------------------TTSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp CT-TSCEEEEEECSS-----------------------------------CCCEEEEESTTSCEEEEEETTEEEEE
T ss_pred CC-CCCEEEEEECCC-----------------------------------CceeEEEECCCCCEEEEEcCCeEEEE
Confidence 97 599999998776 3678999 699999999999887665
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=4e-18 Score=166.11 Aligned_cols=270 Identities=11% Similarity=0.101 Sum_probs=181.9
Q ss_pred ceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCc
Q 011970 130 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI 209 (474)
Q Consensus 130 ~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~t 209 (474)
..|++++|+|++..++..+ .+ +.++.| .++.. ..+. ++..++..++|+ ++|++++++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~----~~------~~~~~~---~~~~~---~~~~-~~~~~~~~~~~~-~~g~l~~~~~~~~~ 67 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPII----SE------SELQTI---TAEPW---LEIS-KKGLQLEGLNFD-RQGQLFLLDVFEGN 67 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCC----CG------GGSCEE---ECEEE---EEEE-SSCCCEEEEEEC-TTSCEEEEETTTCE
T ss_pred cccceeeecCCccceeEEe----ec------ccCccc---cccee---EEEe-ccCccccCcEEC-CCCCEEEEECCCCE
Confidence 4578899999998776642 12 233333 12210 0111 134567789998 79998888999999
Q ss_pred EEEeecCCCeEEEEE--cCCcEEEEEEcCCceEEEEecCC--CCccEEEEecCCCeEEEEEe--ecCcceeEEEEEecCC
Q 011970 210 YKVFDLKNYTMLYSI--SDKHVQEIKISPGIMLLIFNRSS--SHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFIEQFN 283 (474)
Q Consensus 210 iKlWdl~tg~~l~tl--~~~~V~~vafSpg~~la~~s~~s--~D~tIkLWdi~tG~~L~tl~--~h~~~v~~V~F~~~~~ 283 (474)
|.+||++++++.... ....+.+++++|++.++++.... ....|.+||.++++....+. .+...+..++|. +++
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d-~~g 146 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFD-SKG 146 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEEC-TTS
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEEC-CCC
Confidence 999999998876544 35689999999866666554221 01579999999887654443 233567888886 445
Q ss_pred CeEEEEeC-------CCcEEEEECCCCceEEeccccCCceEEEEEcCCCc-EEEEEc-CCcEEEEeC--CCcEEEEe---
Q 011970 284 EKLLVKQE-------NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNF--RGELVTSF--- 349 (474)
Q Consensus 284 ~~ll~~~~-------D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~-llaS~s-D~tIklWd~--~G~ll~tl--- 349 (474)
.+.++.. .+.|..+|..+++..... .+...+..++|+|||+ ++++.+ ++.|.+||+ +|+.+..+
T Consensus 147 -~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~ 224 (333)
T 2dg1_A 147 -GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGAT 224 (333)
T ss_dssp -CEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEE
T ss_pred -CEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccce
Confidence 4555433 245666666666655443 3445688999999998 556666 899999999 46554332
Q ss_pred -----ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCC
Q 011970 350 -----EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSS 424 (474)
Q Consensus 350 -----~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~ 424 (474)
.++. ....++++|||+++++... ++.|.+||. +|+.+.++..+.. ..
T Consensus 225 ~~~~~~~~~------~~~~i~~d~~G~l~v~~~~-----------~~~v~~~d~-~g~~~~~~~~~~~-~~--------- 276 (333)
T 2dg1_A 225 IPYYFTGHE------GPDSCCIDSDDNLYVAMYG-----------QGRVLVFNK-RGYPIGQILIPGR-DE--------- 276 (333)
T ss_dssp EEEECCSSS------EEEEEEEBTTCCEEEEEET-----------TTEEEEECT-TSCEEEEEECTTG-GG---------
T ss_pred EEEecCCCC------CCCceEECCCCCEEEEEcC-----------CCEEEEECC-CCCEEEEEEcCCC-cc---------
Confidence 2331 1578999999999988654 789999997 7888888865431 00
Q ss_pred CCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCC
Q 011970 425 TGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRH 466 (474)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~D 466 (474)
-.+..+.+++|+|||+.|+.++.+
T Consensus 277 ------------------g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 277 ------------------GHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ------------------TCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ------------------ccccCcceEEECCCCCEEEEEeCc
Confidence 001147789999999888766555
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=4.8e-17 Score=177.25 Aligned_cols=258 Identities=14% Similarity=0.098 Sum_probs=184.8
Q ss_pred CCceEEEEEEeeCCCEEEEEEeec-CCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecC
Q 011970 128 PDEVIRSLFYNKNNDSLITVSVYA-SDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQ 206 (474)
Q Consensus 128 ~~~~i~sv~fspdg~~Lis~S~~~-s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~ 206 (474)
+...+.+++|||||+.||.++..+ ++. .++++||+.+|+.... ... ... +..++|+ |||+.|++++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~------~~i~v~d~~tg~~~~~--~~~--~~~-~~~~~ws-pDg~~l~~~~~ 190 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDW------VTIKFMKVDGAKELPD--VLE--RVK-FSCMAWT-HDGKGMFYNAY 190 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSC------EEEEEEETTTTEEEEE--EEE--EEC-SCCEEEC-TTSSEEEEEEC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCce------EEEEEEECCCCCCCcc--ccc--Ccc-cceEEEE-eCCCEEEEEEE
Confidence 334689999999999999877644 333 5899999999986321 111 121 4479998 79999999998
Q ss_pred CCc----------------EEEeecCCCe----EEEEEcC--CcEEEEEEcC-CceEEEEecCCC--CccEEEEecCC--
Q 011970 207 DSI----------------YKVFDLKNYT----MLYSISD--KHVQEIKISP-GIMLLIFNRSSS--HVPLKILSIED-- 259 (474)
Q Consensus 207 D~t----------------iKlWdl~tg~----~l~tl~~--~~V~~vafSp-g~~la~~s~~s~--D~tIkLWdi~t-- 259 (474)
|+. |++|++.+++ +++.... ..+.+++||| |..|+..+..+. +..|.+||+.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 270 (710)
T 2xdw_A 191 PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQES 270 (710)
T ss_dssp CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSS
T ss_pred CCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccc
Confidence 877 9999999876 4444432 4588999998 455655543222 56899999987
Q ss_pred ----Ce-EEEEEeecCcceeEEEEEecCCCeEEEEeC----CCcEEEEECCCCc--eEEeccccCC--ceEEEEEcCCCc
Q 011970 260 ----GT-VLKVFYHLLHRNKKVDFIEQFNEKLLVKQE----NENLQILDVRNAE--LMEVSRTEFM--TPSAFIFLYENQ 326 (474)
Q Consensus 260 ----G~-~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~----D~tIkIWDv~tg~--~~~~l~~h~~--~v~sv~Fspdg~ 326 (474)
|+ .++.+..+...+..+ |+ +++++|+..+. +..|.+||+.+++ ..+.+..|.. .+..++|++++.
T Consensus 271 ~~~~~~~~~~~l~~~~~~~~~~-~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 271 NGITGILKWVKLIDNFEGEYDY-VT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF 348 (710)
T ss_dssp SSSCSSCCCEEEECSSSSCEEE-EE-EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE
T ss_pred cccCCccceEEeeCCCCcEEEE-Ee-ccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE
Confidence 64 467777665555443 54 57888887653 3469999999875 2344444433 688899999999
Q ss_pred EEEEEc-CCc--EEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe
Q 011970 327 LFLTFR-NRT--VAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 402 (474)
Q Consensus 327 llaS~s-D~t--IklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~ 402 (474)
++++.+ |+. |.+||+ +|++++.+..|... +..++++||++.|+-...+ ....++|.+||+.+|+
T Consensus 349 lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~-----v~~~~~s~d~~~l~~~~ss-------~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 349 LVLCYLHDVKNTLQLHDLATGALLKIFPLEVGS-----VVGYSGQKKDTEIFYQFTS-------FLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEECCCSSE-----EEEEECCTTCSEEEEEEEC-------SSCCCEEEEEETTSSS
T ss_pred EEEEEEECCEEEEEEEECCCCCEEEecCCCCce-----EEEEecCCCCCEEEEEEeC-------CCCCCEEEEEECCCCc
Confidence 999998 884 566788 69998999887543 6889999999766533221 2357899999999998
Q ss_pred E-EEEecCCC
Q 011970 403 C-LAKINATN 411 (474)
Q Consensus 403 c-l~tl~gH~ 411 (474)
+ +..++.+.
T Consensus 417 ~~~~~l~~~~ 426 (710)
T 2xdw_A 417 LEPRVFREVT 426 (710)
T ss_dssp CCCEEEEECC
T ss_pred cceEEeeecc
Confidence 5 56666544
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=6e-18 Score=184.41 Aligned_cols=237 Identities=11% Similarity=0.035 Sum_probs=168.9
Q ss_pred CceEEEEeCCCCeEEEEecCCC-----cEEEeecCCCeEEE-EEcCCcEEEEEEcCCc-eEEEEecCCC-----------
Q 011970 187 WPGFVEFDDVNGKVLTYSAQDS-----IYKVFDLKNYTMLY-SISDKHVQEIKISPGI-MLLIFNRSSS----------- 248 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~D~-----tiKlWdl~tg~~l~-tl~~~~V~~vafSpg~-~la~~s~~s~----------- 248 (474)
.+..++|| |||+.||+++.++ +|++||+++|+.+. ++....+.+++|||++ .|+.++....
T Consensus 126 ~~~~~~~S-PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 126 ALRGYAFS-EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEEC-TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 35578998 8999999877644 99999999999765 3433346789999854 5555433211
Q ss_pred --CccEEEEecCCCe----EEEEEeecCcceeEEEEEecCCCeEEEEeC-----CCcEEEEECCC------Cc-eEEecc
Q 011970 249 --HVPLKILSIEDGT----VLKVFYHLLHRNKKVDFIEQFNEKLLVKQE-----NENLQILDVRN------AE-LMEVSR 310 (474)
Q Consensus 249 --D~tIkLWdi~tG~----~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~-----D~tIkIWDv~t------g~-~~~~l~ 310 (474)
...|++|++.+++ ++.+...|...+..+.|+ |++.+|+..+. +..|.+||+.+ ++ ..+.+.
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELS-DDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEEC-TTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEc-CCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 1239999999987 222222344557788987 78888888653 67899999987 64 355556
Q ss_pred ccCCceEEEEEcCCCcEEEEEc--C---CcEEEEeCC-Cc--EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCc
Q 011970 311 TEFMTPSAFIFLYENQLFLTFR--N---RTVAVWNFR-GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPE 382 (474)
Q Consensus 311 ~h~~~v~sv~Fspdg~llaS~s--D---~tIklWd~~-G~--ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~ 382 (474)
.|...+.. .|+|||+.|+..+ + ..|.+||+. ++ ..+++..|.... .+.+++|++++.+++++..
T Consensus 284 ~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~lv~~~~~---- 355 (710)
T 2xdw_A 284 DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD---VLEWVACVRSNFLVLCYLH---- 355 (710)
T ss_dssp CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC---EEEEEEEETTTEEEEEEEE----
T ss_pred CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC---eEEEEEEEcCCEEEEEEEE----
Confidence 66666655 4788888766544 3 269999995 54 345666665421 2678999999999999876
Q ss_pred cccccCCCCe--EEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEE
Q 011970 383 DQWMEGSAGS--INVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEI 460 (474)
Q Consensus 383 ~~~~~s~Dgt--IklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~L 460 (474)
|+. |.+||+.+|++++.|..|.. .|.+++++||++.|
T Consensus 356 -------~g~~~l~~~~~~~g~~~~~l~~~~~----------------------------------~v~~~~~s~d~~~l 394 (710)
T 2xdw_A 356 -------DVKNTLQLHDLATGALLKIFPLEVG----------------------------------SVVGYSGQKKDTEI 394 (710)
T ss_dssp -------TTEEEEEEEETTTCCEEEEECCCSS----------------------------------EEEEEECCTTCSEE
T ss_pred -------CCEEEEEEEECCCCCEEEecCCCCc----------------------------------eEEEEecCCCCCEE
Confidence 774 56678778999999988753 78899999999877
Q ss_pred E----EEcCCCcEEEccC
Q 011970 461 Y----TGNRHGLVHVWSN 474 (474)
Q Consensus 461 a----Sgs~DgtVklWd~ 474 (474)
+ |....++|.+||.
T Consensus 395 ~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 395 FYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEEEECSSCCCEEEEEET
T ss_pred EEEEeCCCCCCEEEEEEC
Confidence 6 3335678888873
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=1.8e-18 Score=188.40 Aligned_cols=232 Identities=11% Similarity=0.035 Sum_probs=163.8
Q ss_pred CceEEEEeCCCCeEEE-----EecCCCcEEEeecCCCeEE-E-EEcCCcEEEEEEcCCce-EEEEecCCCCcc-------
Q 011970 187 WPGFVEFDDVNGKVLT-----YSAQDSIYKVFDLKNYTML-Y-SISDKHVQEIKISPGIM-LLIFNRSSSHVP------- 251 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~La-----S~s~D~tiKlWdl~tg~~l-~-tl~~~~V~~vafSpg~~-la~~s~~s~D~t------- 251 (474)
.+..++|| |||++|| +|+.+.+|++||+++|+.+ . .+......+++|||++. |+..+. |.+
T Consensus 122 ~~~~~~~S-PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~---d~~~~~~~~~ 197 (695)
T 2bkl_A 122 SLGTWAVS-WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWL---PTDPSIKVDE 197 (695)
T ss_dssp EEEEEEEC-TTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEEC---CCCTTSCGGG
T ss_pred EEEEEEEC-CCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEe---cCCCCCcccc
Confidence 35679998 8999999 5556789999999999875 2 12222226899998654 544432 333
Q ss_pred ------EEEEecCCCe----EEEEEeecCcceeEEEEEecCCCeEEEEeCCC----cEEEEECCCCceEEeccccCCceE
Q 011970 252 ------LKILSIEDGT----VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENE----NLQILDVRNAELMEVSRTEFMTPS 317 (474)
Q Consensus 252 ------IkLWdi~tG~----~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~----tIkIWDv~tg~~~~~l~~h~~~v~ 317 (474)
|++|++.+|+ ++.....|...+..+.|+ |+|.+|++.+.++ .|.+||..+++...+ ..+...+.
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l-~~~~~~~~ 275 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS-RDGKYLFVYILRGWSENDVYWKRPGEKDFRLL-VKGVGAKY 275 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC-TTSCCEEEEEEETTTEEEEEEECTTCSSCEEE-EECSSCCE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC-CCCCEEEEEEeCCCCceEEEEEcCCCCceEEe-ecCCCceE
Confidence 9999999887 444444455678899987 6788888876555 677777766765544 44555666
Q ss_pred EEEEcCCCcEEEEEc----CCcEEEEeCC-CcE--EEEeccCC-CCcCCCCeeEEEECCCCCEEEEEecCCCccccccCC
Q 011970 318 AFIFLYENQLFLTFR----NRTVAVWNFR-GEL--VTSFEDHL-LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGS 389 (474)
Q Consensus 318 sv~Fspdg~llaS~s----D~tIklWd~~-G~l--l~tl~gH~-~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~ 389 (474)
..++ |+|++++++. ++.|.+||++ ++. .+.+..|. .. .+.+++|+ ++++++++..
T Consensus 276 ~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~----~l~~~~~~-~~~lv~~~~~----------- 338 (695)
T 2bkl_A 276 EVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA----SLLSVSIV-GGHLSLEYLK----------- 338 (695)
T ss_dssp EEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC----EEEEEEEE-TTEEEEEEEE-----------
T ss_pred EEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC----eEEEEEEE-CCEEEEEEEE-----------
Confidence 6667 5555666654 4789999995 653 23343333 33 26788998 8889999877
Q ss_pred CCeEEEEeCC-CCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEE----EEc
Q 011970 390 AGSINVSSIL-TGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY----TGN 464 (474)
Q Consensus 390 DgtIklWdi~-tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~La----Sgs 464 (474)
|++.+||.+. +|++++.+..+.. ..|.+++++|||+.|+ |..
T Consensus 339 dg~~~l~~~~~~g~~~~~l~~~~~---------------------------------~~v~~~~~s~d~~~l~~~~ss~~ 385 (695)
T 2bkl_A 339 DATSEVRVATLKGKPVRTVQLPGV---------------------------------GAASNLMGLEDLDDAYYVFTSFT 385 (695)
T ss_dssp TTEEEEEEEETTCCEEEECCCSSS---------------------------------SEECCCBSCTTCSEEEEEEEETT
T ss_pred CCEEEEEEEeCCCCeeEEecCCCC---------------------------------eEEEEeecCCCCCEEEEEEcCCC
Confidence 9999998764 6888888876531 1677889999999888 556
Q ss_pred CCCcEEEccC
Q 011970 465 RHGLVHVWSN 474 (474)
Q Consensus 465 ~DgtVklWd~ 474 (474)
.+++|.+||.
T Consensus 386 ~P~~v~~~d~ 395 (695)
T 2bkl_A 386 TPRQIYKTSV 395 (695)
T ss_dssp EEEEEEEEET
T ss_pred CCCEEEEEEC
Confidence 6788999973
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=6.4e-17 Score=160.66 Aligned_cols=252 Identities=8% Similarity=0.043 Sum_probs=188.1
Q ss_pred eEEEEeEeccCCCCCccceeee---ccc-cCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEc
Q 011970 161 RSTKIEYIRRGKPDSGFALFES---ESL-KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS 235 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~---~~~-~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafS 235 (474)
.++.++|..+|+....+ +.. ..+ ..+..++++ ++++.++...+++|.+||.++++.+.++. ......|+|+
T Consensus 17 ~~l~~~d~~t~~~~~~i--~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~ 92 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEV--FYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFL 92 (328)
T ss_dssp BEEEEEETTTTEEECSH--HHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEE
T ss_pred ceEEEEECCCCEEhhhh--HhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEe
Confidence 68888888888864321 211 012 234578886 68888888889999999999999999886 4679999998
Q ss_pred CCceEEEEecCCCCccEEEEecCCCeEEEEEeecC-----cceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCceEEe
Q 011970 236 PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLL-----HRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEV 308 (474)
Q Consensus 236 pg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~-----~~v~~V~F~~~~~~~ll~~~--~D~tIkIWDv~tg~~~~~ 308 (474)
|++.+.++.. .++.|.+||+++++++.++.... .....+++ +++++.++. .+++|.++|+.+++.+.+
T Consensus 93 ~~g~lyv~~~--~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~---~~~~lyv~~~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 93 SDEKAYVTQI--WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ---YGKYVYVNCWSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp ETTEEEEEEB--SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE---ETTEEEEEECTTCCEEEEEETTTTEEEEE
T ss_pred CCCeEEEEEC--CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE---ECCEEEEEcCCCCCEEEEEECCCCeEEEE
Confidence 7667776642 36899999999999998887322 14456776 367888875 489999999999998876
Q ss_pred ccccCCceEEEEEcCCCcEEEEEc-C----------CcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEE
Q 011970 309 SRTEFMTPSAFIFLYENQLFLTFR-N----------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 376 (474)
Q Consensus 309 l~~h~~~v~sv~Fspdg~llaS~s-D----------~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~ 376 (474)
.... ..+..++|+|||+++++.. + ++|.++|.. ++++.++.-..... .+.++|+|||++|...
T Consensus 168 i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~----p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 168 LTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDW----PSEVQLNGTRDTLYWI 242 (328)
T ss_dssp EECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCC----CEEEEECTTSCEEEEE
T ss_pred EEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCC----ceeEEEecCCCEEEEE
Confidence 5432 3567899999999999887 5 799999995 88887775322211 4799999999998865
Q ss_pred ecCCCccccccCCCCeEEEEeCCCCeEEEE--ecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEc
Q 011970 377 CKAEPEDQWMEGSAGSINVSSILTGKCLAK--INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD 454 (474)
Q Consensus 377 s~~~~~~~~~~s~DgtIklWdi~tG~cl~t--l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafS 454 (474)
+++|.+||+.+|+.... +..+ ....+.++++
T Consensus 243 -------------~~~v~~~d~~t~~~~~~~~~~~~----------------------------------~~~p~gi~vd 275 (328)
T 3dsm_A 243 -------------NNDIWRMPVEADRVPVRPFLEFR----------------------------------DTKYYGLTVN 275 (328)
T ss_dssp -------------SSSEEEEETTCSSCCSSCSBCCC----------------------------------SSCEEEEEEC
T ss_pred -------------ccEEEEEECCCCceeeeeeecCC----------------------------------CCceEEEEEc
Confidence 34899999988886321 1110 1267889999
Q ss_pred C-CCCEEEEE----cCCCcEEEcc
Q 011970 455 E-ERNEIYTG----NRHGLVHVWS 473 (474)
Q Consensus 455 p-Dg~~LaSg----s~DgtVklWd 473 (474)
| +|+..++. ..+++|.+||
T Consensus 276 p~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 276 PNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp TTTCCEEEEECTTSSSEEEEEEEC
T ss_pred CCCCeEEEEcccccccCCEEEEEC
Confidence 9 56666666 6789999997
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.78 E-value=6.9e-17 Score=158.13 Aligned_cols=215 Identities=9% Similarity=0.030 Sum_probs=170.8
Q ss_pred CeEEEEecCCCcEEEeecCCCeEEEEEcC---CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeec-Ccce
Q 011970 198 GKVLTYSAQDSIYKVFDLKNYTMLYSISD---KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL-LHRN 273 (474)
Q Consensus 198 Gk~LaS~s~D~tiKlWdl~tg~~l~tl~~---~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h-~~~v 273 (474)
|++|++++.|+.|.+||.++|+.+.++.. ..+.+++++|++.++++ .+..|..||. +|+.+.++..+ ...+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs----~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS----YSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE----CBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe----CCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 68999999999999999999999999874 36899999986666553 2568999998 99999999854 3467
Q ss_pred eEEEEEecCCCeEEEEeC-CCcEEEEECCCCceEEecc------ccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCCCcE
Q 011970 274 KKVDFIEQFNEKLLVKQE-NENLQILDVRNAELMEVSR------TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGEL 345 (474)
Q Consensus 274 ~~V~F~~~~~~~ll~~~~-D~tIkIWDv~tg~~~~~l~------~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~G~l 345 (474)
.++.+. +++..+++.+. ++.|..+|. +|+.+..+. ++...+..++++++|+++++.. ++.|..||.+|+.
T Consensus 80 ~~~~~~-~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~ 157 (276)
T 3no2_A 80 QTARIL-PDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQL 157 (276)
T ss_dssp EEEEEC-TTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred cccEEC-CCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCE
Confidence 788886 56666666666 788888885 787765432 3334666778999999999998 9999999999999
Q ss_pred EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCC
Q 011970 346 VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSST 425 (474)
Q Consensus 346 l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~ 425 (474)
+.++..+.. ..++.+.|+|++|++++. ++.|..+|..||+.+.++..+.. +.
T Consensus 158 ~w~~~~~~~------~~~~~~~~~g~~~v~~~~-----------~~~v~~~d~~tG~~~w~~~~~~~-~~---------- 209 (276)
T 3no2_A 158 LNSVKLSGT------PFSSAFLDNGDCLVACGD-----------AHCFVQLNLESNRIVRRVNANDI-EG---------- 209 (276)
T ss_dssp EEEEECSSC------CCEEEECTTSCEEEECBT-----------TSEEEEECTTTCCEEEEEEGGGS-BS----------
T ss_pred EEEEECCCC------ccceeEcCCCCEEEEeCC-----------CCeEEEEeCcCCcEEEEecCCCC-CC----------
Confidence 999987633 357889999999998764 67899999999999999975431 00
Q ss_pred CccccccccccccccccccccCEEEEEEcCCCCEEEEEc
Q 011970 426 GKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN 464 (474)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs 464 (474)
..|..+.+++..|+|+++++.+
T Consensus 210 -----------------~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 210 -----------------VQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp -----------------CCCSEEEEEEECTTSCEEEEEE
T ss_pred -----------------ccccccccceEcCCCCEEEEec
Confidence 0123688999999999988873
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=1.3e-16 Score=155.35 Aligned_cols=265 Identities=8% Similarity=0.034 Sum_probs=183.6
Q ss_pred EEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEe
Q 011970 91 VIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 168 (474)
Q Consensus 91 V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i 168 (474)
|.++.|+ ...+++.+.+++++.| .++.+..+.. +...+.+++|+|+|+.+++. ..+ ..+.+|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~g~l~~~~----~~~------~~i~~~d~ 73 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISK-KGLQLEGLNFDRQGQLFLLD----VFE------GNIFKINP 73 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEES-SCCCEEEEEECTTSCEEEEE----TTT------CEEEEECT
T ss_pred cceeeecCCccceeEEeecccCccc---ccceeEEEec-cCccccCcEECCCCCEEEEE----CCC------CEEEEEeC
Confidence 3344444 5566777889999999 4778888876 44668999999999966652 344 68888998
Q ss_pred ccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCC----CcEEEeecCCCeEEEEEc----CCcEEEEEEcCCceE
Q 011970 169 RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKNYTMLYSIS----DKHVQEIKISPGIML 240 (474)
Q Consensus 169 ~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D----~tiKlWdl~tg~~l~tl~----~~~V~~vafSpg~~l 240 (474)
..|++.. ++. .....|..++|+ |||+++++...+ +.|.+||.+++++...+. ...+.+++++|++.+
T Consensus 74 ~~~~~~~---~~~-~~~~~~~~i~~~-~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l 148 (333)
T 2dg1_A 74 ETKEIKR---PFV-SHKANPAAIKIH-KDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGF 148 (333)
T ss_dssp TTCCEEE---EEE-CSSSSEEEEEEC-TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCE
T ss_pred CCCcEEE---Eee-CCCCCcceEEEC-CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCE
Confidence 8777521 221 123457789998 799998887776 789999998887654443 357999999986666
Q ss_pred EEEecCC----CCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCC-CceEEe------
Q 011970 241 LIFNRSS----SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRN-AELMEV------ 308 (474)
Q Consensus 241 a~~s~~s----~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~t-g~~~~~------ 308 (474)
.++.... ....|..+|.++++...... +......++|+ +++..|.++ ..++.|.+||+.+ ++.+..
T Consensus 149 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~-~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~ 226 (333)
T 2dg1_A 149 YFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NISVANGIALS-TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIP 226 (333)
T ss_dssp EEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEE
T ss_pred EEEeccccccCCCceEEEEeCCCCEEEEeec-CCCcccceEEC-CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEE
Confidence 6654321 12446666666666544333 23456788886 566667665 5789999999974 443321
Q ss_pred --ccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCCCcEEEEeccCCCC--cCCCCeeEEEECCCCCEEEEEec
Q 011970 309 --SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLW--HPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 309 --l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~G~ll~tl~gH~~~--~~~~~v~svafSpDg~~LaS~s~ 378 (474)
+.++ ..+..++++++|+++++.. ++.|.+||.+|+.+.++..+... +. ..+.+++|+|||+.|..++.
T Consensus 227 ~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~-~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 227 YYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHM-LRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCS-CBCCEEEECTTSCEEEEEEE
T ss_pred EecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccc-cCcceEEECCCCCEEEEEeC
Confidence 2223 4788999999999999887 89999999999988888654320 00 01578999999877765443
No 188
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.78 E-value=1.1e-16 Score=175.84 Aligned_cols=283 Identities=11% Similarity=0.062 Sum_probs=193.0
Q ss_pred ccEEEEeeCCCe---EEeeecc-----ccceeeE-----eecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 98 RDIVFALAHSGV---CAAFSRE-----TNRRICF-----LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 98 ~~~las~s~dgt---iklW~~~-----tg~~l~~-----l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
|+.++-...++. -.||-+. .|+.-.. |...++..+.+++|||||+.||.++..++.+ -.+++
T Consensus 118 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e-----~~~i~ 192 (741)
T 1yr2_A 118 GASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSD-----WRTVK 192 (741)
T ss_dssp TTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCS-----EEEEE
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCc-----eEEEE
Confidence 777776665554 6677654 2332222 2222334789999999999999887664443 15799
Q ss_pred EeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCc--------------EEEeecCCCe----EEEEEcC
Q 011970 165 IEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI--------------YKVFDLKNYT----MLYSISD 226 (474)
Q Consensus 165 iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~t--------------iKlWdl~tg~----~l~tl~~ 226 (474)
+||+.+|+... .... .. ....++|+ || +.|++++.|.. |++|++.++. +++...+
T Consensus 193 v~dl~tg~~~~---~~~~-~~-~~~~~~ws-pD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 193 FVGVADGKPLA---DELK-WV-KFSGLAWL-GN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE 265 (741)
T ss_dssp EEETTTCCEEE---EEEE-EE-ESCCCEES-TT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEECCCCCCCC---ccCC-Cc-eeccEEEE-CC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC
Confidence 99999998632 1111 11 12368998 79 99999988765 8999998876 4444443
Q ss_pred C--cEEEEEEcCCc-eEEEEecCC--CCccEEEEecCCC--eEEEEEeecCcceeEEEEEecCCCeEEEEeC----CCcE
Q 011970 227 K--HVQEIKISPGI-MLLIFNRSS--SHVPLKILSIEDG--TVLKVFYHLLHRNKKVDFIEQFNEKLLVKQE----NENL 295 (474)
Q Consensus 227 ~--~V~~vafSpg~-~la~~s~~s--~D~tIkLWdi~tG--~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~----D~tI 295 (474)
+ .+.++.|||++ .|+..+... ....|.+||+.+| ++++.+..+...+....+ ++++.|+..+. +..|
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~--~dg~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD--GVGDQLWFVSGDGAPLKKI 343 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEE--EETTEEEEEECTTCTTCEE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEe--ccCCEEEEEECCCCCCCEE
Confidence 3 58999999855 566554332 2457999999988 425667655554544433 67888888764 4559
Q ss_pred EEEECCCC--ceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeC--CCcEEEEeccC-CCCcCCCCeeEEEECCC
Q 011970 296 QILDVRNA--ELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF--RGELVTSFEDH-LLWHPDCNTNNIYITSD 369 (474)
Q Consensus 296 kIWDv~tg--~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~--~G~ll~tl~gH-~~~~~~~~v~svafSpD 369 (474)
.+||+.++ +...++.++...+..++|+ +++++++.+ |++.+||.+ +|+.++.+..+ ... |..++++||
T Consensus 344 ~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~-----v~~~~~s~d 417 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGS-----ASGLSGRPG 417 (741)
T ss_dssp EEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCE-----EEEEECCBT
T ss_pred EEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeE-----EEEeecCCC
Confidence 99999985 4556666666667788887 778888888 998888865 58888888754 332 688999999
Q ss_pred CCEEE-EEecCCCccccccCCCCeEEEEeCCCCeEEEEecC
Q 011970 370 QDLII-SYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 409 (474)
Q Consensus 370 g~~La-S~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~g 409 (474)
|+.|+ +++. ....++|.+||+.+|+ ...|+.
T Consensus 418 ~~~l~~~~ss--------~~~P~~i~~~d~~tg~-~~~l~~ 449 (741)
T 1yr2_A 418 DRHAYLSFSS--------FTQPATVLALDPATAK-TTPWEP 449 (741)
T ss_dssp CSCEEEEEEE--------TTEEEEEEEEETTTTE-EEECSC
T ss_pred CCEEEEEEcC--------CCCCCEEEEEECCCCc-EEEEec
Confidence 98665 3332 2347899999999888 556654
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.76 E-value=3.9e-15 Score=161.00 Aligned_cols=321 Identities=12% Similarity=0.066 Sum_probs=219.3
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEec--cCCCCC
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR--RGKPDS 175 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~--~G~~~~ 175 (474)
+.++++...++++.++|..|++.+.++..+ ..+..+.|||||++|.+++ .+ ..+.++|+. +++...
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~----~d------g~V~viD~~~~t~~~v~ 234 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIG----RD------GKVNMIDLWMKEPTTVA 234 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEE----TT------SEEEEEETTSSSCCEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCC--CCccceEECCCCCEEEEEc----CC------CeEEEEECCCCCCcEeE
Confidence 567788889999999999999999999753 3477999999999988765 34 478899985 666533
Q ss_pred ccceeeeccccCceEEEEeC---CCCeEEEEec-CCCcEEEeecCCCeEEEEEcC------------C-cEEEEEEcCCc
Q 011970 176 GFALFESESLKWPGFVEFDD---VNGKVLTYSA-QDSIYKVFDLKNYTMLYSISD------------K-HVQEIKISPGI 238 (474)
Q Consensus 176 ~~~lf~~~~~~~~~~V~Fs~---~nGk~LaS~s-~D~tiKlWdl~tg~~l~tl~~------------~-~V~~vafSpg~ 238 (474)
.++ . -..|..++||+ |||++|..+. .+++|.|+|..+.+.+.++.- . .|..|.+|+++
T Consensus 235 ~i~---~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 235 EIK---I--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp EEE---C--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred EEe---c--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 211 1 12466899985 6998776655 569999999999999988752 1 58899999743
Q ss_pred eEEEEecCCCCccEEEEecCCCeEEEEEe-ecCcceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCceEEeccc-----
Q 011970 239 MLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSRT----- 311 (474)
Q Consensus 239 ~la~~s~~s~D~tIkLWdi~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~tg~~~~~l~~----- 311 (474)
..+..+. ..++.|.++|..+.+.++.-. ........+.|. +++.+++++. .+++|.++|..+++++....-
T Consensus 310 ~~~vv~~-~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~-pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P 387 (567)
T 1qks_A 310 PEFIVNV-KETGKILLVDYTDLNNLKTTEISAERFLHDGGLD-GSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP 387 (567)
T ss_dssp SEEEEEE-TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEEC-TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB
T ss_pred CEEEEEe-cCCCeEEEEecCCCccceeeeeeccccccCceEC-CCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC
Confidence 3333322 456889999988765444322 122334567776 6788887764 789999999999998765432
Q ss_pred cCCceEEEEEcCC-CcEEEEEc--CCcEEEEeCC--------CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCC
Q 011970 312 EFMTPSAFIFLYE-NQLFLTFR--NRTVAVWNFR--------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAE 380 (474)
Q Consensus 312 h~~~v~sv~Fspd-g~llaS~s--D~tIklWd~~--------G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~ 380 (474)
|...--.+ |.|+ |.+++++. +++|.++|.. .+.++++...... -.-|.++||+++|-....-.
T Consensus 388 hpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g-----~~~i~~~p~~~~l~v~~~~~ 461 (567)
T 1qks_A 388 HPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG-----SLFIKTHPNSQYLYVDATLN 461 (567)
T ss_dssp CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-----CCCEECCTTCSEEEEECTTC
T ss_pred CCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCC-----CEEEEeCCCCCeEEEecCCC
Confidence 32222222 5786 77777775 7899999984 4678888865322 12477899999888754211
Q ss_pred CccccccCCCCeEEEEeCCCC------eEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEc
Q 011970 381 PEDQWMEGSAGSINVSSILTG------KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD 454 (474)
Q Consensus 381 ~~~~~~~s~DgtIklWdi~tG------~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafS 454 (474)
||.. -.++|-++|+.+. ++...+.-- -|+.+++.-+.+..+.|+
T Consensus 462 ~~~~----~~~~v~v~d~~~~~~~g~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~ 511 (567)
T 1qks_A 462 PEAE----ISGSVAVFDIKAMTGDGSDPEFKTLPIA--------------------------EWAGITEGQPRVVQGEFN 511 (567)
T ss_dssp SSHH----HHTCEEEEEGGGCCCSSSCCCEEEECHH--------------------------HHHTCCSSCCEEEEEEEC
T ss_pred CCcc----cCceEEEEECCcccccccCCCcEEeccc--------------------------cccccCCCCcceEeeeEC
Confidence 1100 0368999999765 222333200 011111222378899999
Q ss_pred CCCCEEEEEc-----CCCcEEEcc
Q 011970 455 EERNEIYTGN-----RHGLVHVWS 473 (474)
Q Consensus 455 pDg~~LaSgs-----~DgtVklWd 473 (474)
|||++|+.+. .++.|-|.|
T Consensus 512 ~~G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 512 KDGTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp TTSSEEEEEEECCTTSCCEEEEEE
T ss_pred CCCCEEEEEeecCCCCCCcEEEEE
Confidence 9999988763 368887765
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.76 E-value=1.9e-14 Score=136.00 Aligned_cols=269 Identities=11% Similarity=0.051 Sum_probs=189.6
Q ss_pred CCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeee-ccccCceEEEEeCCCCeEEEEecC
Q 011970 128 PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQ 206 (474)
Q Consensus 128 ~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s~ 206 (474)
+...+++|++.|+|..+++. ..+ ..+.+++.. |+. ..+.. .....|..++++ ++|.++++...
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~----~~~------~~v~~~d~~-~~~----~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~ 76 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQ----HKA------NMISCINLD-GKI----TEYPLPTPDAKVMCLTIS-SDGEVWFTENA 76 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEE----TTT------TEEEEECTT-CCE----EEEECSSTTCCEEEEEEC-TTSCEEEEETT
T ss_pred cCCCccceEECCCCCEEEEe----cCC------CcEEEEcCC-CCe----EEecCCcccCceeeEEEC-CCCCEEEeCCC
Confidence 44679999999999977652 122 467777755 664 11221 123467789998 79999988877
Q ss_pred CCcEEEeecCCCeE-EEEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEE-eecCcceeEEEEEecC
Q 011970 207 DSIYKVFDLKNYTM-LYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF-YHLLHRNKKVDFIEQF 282 (474)
Q Consensus 207 D~tiKlWdl~tg~~-l~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl-~~h~~~v~~V~F~~~~ 282 (474)
++.|..||.+ ++. ...+. ...+..+++.|++.|.++. ..+..|..||. +|+..... ..+......+++. ++
T Consensus 77 ~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~--~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~-~~ 151 (299)
T 2z2n_A 77 ANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTE--MNGNRIGRITD-DGKIREYELPNKGSYPSFITLG-SD 151 (299)
T ss_dssp TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEE--TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TT
T ss_pred CCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEe--cCCceEEEECC-CCCEEEecCCCCCCCCceEEEc-CC
Confidence 8999999986 553 23333 3579999999866666653 23568999998 77765432 2334567788875 44
Q ss_pred CCeEEEE-eCCCcEEEEECCCCceEEe-ccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCCCcEEEE-eccCCCCcCC
Q 011970 283 NEKLLVK-QENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTS-FEDHLLWHPD 358 (474)
Q Consensus 283 ~~~ll~~-~~D~tIkIWDv~tg~~~~~-l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~G~ll~t-l~gH~~~~~~ 358 (474)
+ .+.++ ..++.|..||. +++.... +..+...+..+++.++|+++++.. ++.|.+||.+|+.... +..+..
T Consensus 152 g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~---- 225 (299)
T 2z2n_A 152 N-ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNA---- 225 (299)
T ss_dssp S-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTC----
T ss_pred C-CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCC----
Confidence 4 55554 56789999998 8887654 444566789999999999999887 8899999997775432 222222
Q ss_pred CCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEE-ecCCCCCCCCccccCCCCCCccccccccccc
Q 011970 359 CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK-INATNCSPKVDDELGSSSTGKSKKLNKSSYI 437 (474)
Q Consensus 359 ~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (474)
.+.+++++|+|++.++... ++.|..||. +|+.... +.++..
T Consensus 226 -~~~~i~~~~~g~l~v~~~~-----------~~~i~~~d~-~g~~~~~~~~~~~~------------------------- 267 (299)
T 2z2n_A 226 -RPHAITAGAGIDLWFTEWG-----------ANKIGRLTS-NNIIEEYPIQIKSA------------------------- 267 (299)
T ss_dssp -CEEEEEECSTTCEEEEETT-----------TTEEEEEET-TTEEEEEECSSSSC-------------------------
T ss_pred -CceeEEECCCCCEEEeccC-----------CceEEEECC-CCceEEEeCCCCCC-------------------------
Confidence 2689999999998887533 789999997 6764322 222221
Q ss_pred cccccccccCEEEEEEcCCCCEEEEEcCCCcEEE
Q 011970 438 RSTVGEALEDITSLFYDEERNEIYTGNRHGLVHV 471 (474)
Q Consensus 438 ~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVkl 471 (474)
.+.++++ ++|+..++.+.++.+++
T Consensus 268 ---------~~~~i~~-~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 268 ---------EPHGICF-DGETIWFAMECDKIGKL 291 (299)
T ss_dssp ---------CEEEEEE-CSSCEEEEETTTEEEEE
T ss_pred ---------ccceEEe-cCCCEEEEecCCcEEEE
Confidence 6889999 99999888776666665
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.75 E-value=9e-17 Score=176.41 Aligned_cols=275 Identities=12% Similarity=0.073 Sum_probs=179.0
Q ss_pred eeCCCEEEEEEeecCCCccceeeeEEEEeEec-----cCCCCCccceee-----eccccCceEEEEeCCCCeEEEEecCC
Q 011970 138 NKNNDSLITVSVYASDNFSSLKCRSTKIEYIR-----RGKPDSGFALFE-----SESLKWPGFVEFDDVNGKVLTYSAQD 207 (474)
Q Consensus 138 spdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~-----~G~~~~~~~lf~-----~~~~~~~~~V~Fs~~nGk~LaS~s~D 207 (474)
+|||+.++....++..+ ...||-.. .|+. ..|+. .++...+..++|| |||+.||+++.+
T Consensus 115 ~pdG~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~---~~lld~~~l~~~~~~~~~~~~~S-PDG~~la~~~~~ 183 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMN-------QSQLLVRPADAPVGTKG---RVLLDPNTWAKDGATALDAWAAS-DDGRLLAYSVQD 183 (741)
T ss_dssp EEETTEEEEEEECSSCS-------SCEEEEEETTSCTTCCC---EEEECGGGCC----EEEEEEEEC-TTSSEEEEEEEE
T ss_pred EEECCEEEEEEEcCCCe-------EEEEEEEcCCccCCCCC---EEEECHHHhccCCCEEEEeEEEC-CCCCEEEEEEcC
Confidence 49999998877655433 23345443 2332 12222 1111235578998 899999998754
Q ss_pred -----CcEEEeecCCCeEEEE-EcCCcEEEEEEcCCceEEEEecCCC-----------CccEEEEecCCCeE--EEEEee
Q 011970 208 -----SIYKVFDLKNYTMLYS-ISDKHVQEIKISPGIMLLIFNRSSS-----------HVPLKILSIEDGTV--LKVFYH 268 (474)
Q Consensus 208 -----~tiKlWdl~tg~~l~t-l~~~~V~~vafSpg~~la~~s~~s~-----------D~tIkLWdi~tG~~--L~tl~~ 268 (474)
.+|++||+++|+.+.. +....+.+++|||+..|+.+..... ...|++|++.+++. ...+..
T Consensus 184 ~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~ 263 (741)
T 1yr2_A 184 GGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT 263 (741)
T ss_dssp TTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC
T ss_pred CCCceEEEEEEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc
Confidence 5799999999997643 2222235799998855555543221 22499999988862 223332
Q ss_pred --cCcceeEEEEEecCCCeEEEEeCC-----CcEEEEECCCC--ceEEeccccCCceEEEEEcCCCcEEEEEc-C----C
Q 011970 269 --LLHRNKKVDFIEQFNEKLLVKQEN-----ENLQILDVRNA--ELMEVSRTEFMTPSAFIFLYENQLFLTFR-N----R 334 (474)
Q Consensus 269 --h~~~v~~V~F~~~~~~~ll~~~~D-----~tIkIWDv~tg--~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D----~ 334 (474)
+...+..+.|+ |+|.+|+..+.+ ..|.+||+.++ ++.+.+..+...+...++ |+|+.|+..+ + .
T Consensus 264 ~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~dg~~l~~~s~~~~~~~ 341 (741)
T 1yr2_A 264 PELPKRGHGASVS-SDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD-GVGDQLWFVSGDGAPLK 341 (741)
T ss_dssp TTCTTCEEEEEEC-TTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEE-EETTEEEEEECTTCTTC
T ss_pred CCCCeEEEEEEEC-CCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEe-ccCCEEEEEECCCCCCC
Confidence 33357888886 778888887643 48999999988 524444555555555544 7887776655 3 3
Q ss_pred cEEEEeCC-C-cEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCC-CCeEEEEecCCC
Q 011970 335 TVAVWNFR-G-ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL-TGKCLAKINATN 411 (474)
Q Consensus 335 tIklWd~~-G-~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~-tG~cl~tl~gH~ 411 (474)
.|.+||++ + ...+.+..|... .+.+++++ ++.+++++.. |+..+||.+. +|++++.+..+.
T Consensus 342 ~l~~~d~~~~~~~~~~l~~~~~~----~l~~~~~~-~~~lv~~~~~-----------dg~~~l~~~~~~g~~~~~l~~~~ 405 (741)
T 1yr2_A 342 KIVRVDLSGSTPRFDTVVPESKD----NLESVGIA-GNRLFASYIH-----------DAKSQVLAFDLDGKPAGAVSLPG 405 (741)
T ss_dssp EEEEEECSSSSCEEEEEECCCSS----EEEEEEEE-BTEEEEEEEE-----------TTEEEEEEEETTSCEEEECBCSS
T ss_pred EEEEEeCCCCccccEEEecCCCC----eEEEEEEE-CCEEEEEEEE-----------CCEEEEEEEeCCCCceeeccCCC
Confidence 49999996 3 333444333332 25678887 7788888876 8888888654 688888886542
Q ss_pred CCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEE----EEcCCCcEEEccC
Q 011970 412 CSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY----TGNRHGLVHVWSN 474 (474)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~La----Sgs~DgtVklWd~ 474 (474)
. ..|..++++||++.|+ |....++|.+||.
T Consensus 406 ~---------------------------------~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 406 I---------------------------------GSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp S---------------------------------CEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred C---------------------------------eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 1 1688999999999877 5556788999873
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=7.4e-16 Score=148.45 Aligned_cols=234 Identities=9% Similarity=-0.061 Sum_probs=166.5
Q ss_pred cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCC
Q 011970 118 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 197 (474)
Q Consensus 118 g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~n 197 (474)
+..+..|.. +.....+++|+|+|+.|+.++ ..+ ..+..|+...+ . ..|.. ....|..++|+ ++
T Consensus 17 ~~~~~~l~~-~~~~~eg~~~d~~g~~l~~~~---~~~------~~i~~~~~~~~-~----~~~~~-~~~~~~~l~~~-~d 79 (296)
T 3e5z_A 17 GAEARRLAD-GFTWTEGPVYVPARSAVIFSD---VRQ------NRTWAWSDDGQ-L----SPEMH-PSHHQNGHCLN-KQ 79 (296)
T ss_dssp TCCCEEEEC-CCSSEEEEEEEGGGTEEEEEE---GGG------TEEEEEETTSC-E----EEEES-SCSSEEEEEEC-TT
T ss_pred CCcEEEEec-CCccccCCeEeCCCCEEEEEe---CCC------CEEEEEECCCC-e----EEEEC-CCCCcceeeEC-CC
Confidence 444555554 446688999999999444333 233 57888886655 3 23433 34567789998 79
Q ss_pred CeEEEEecCCCcEEEeecCCCeEEEEEc------CCcEEEEEEcCCceEEEEecC--C-------------CCccEEEEe
Q 011970 198 GKVLTYSAQDSIYKVFDLKNYTMLYSIS------DKHVQEIKISPGIMLLIFNRS--S-------------SHVPLKILS 256 (474)
Q Consensus 198 Gk~LaS~s~D~tiKlWdl~tg~~l~tl~------~~~V~~vafSpg~~la~~s~~--s-------------~D~tIkLWd 256 (474)
|+++++...++.|.+||.++|++..... ...+.+++++|++.+.++.+. . ..+.|..++
T Consensus 80 g~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 80 GHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp CCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred CcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEEC
Confidence 9999988888999999998998654332 135678999986666654220 0 012344444
Q ss_pred cCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECC-CCce---EEeccccCCceEEEEEcCCCcEEEEEc
Q 011970 257 IEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR-NAEL---MEVSRTEFMTPSAFIFLYENQLFLTFR 332 (474)
Q Consensus 257 i~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~-tg~~---~~~l~~h~~~v~sv~Fspdg~llaS~s 332 (474)
.. |+. ..+..+......++|+ |++..+++.+.++.|.+||+. +|++ .+++..+...+..++|.++|+++++.
T Consensus 160 ~~-g~~-~~~~~~~~~~~gi~~s-~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 160 PD-GTL-SAPIRDRVKPNGLAFL-PSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp TT-SCE-EEEECCCSSEEEEEEC-TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-
T ss_pred CC-CCE-EEeecCCCCCccEEEC-CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-
Confidence 43 554 4445555667889987 667777555688999999997 6766 34444466678899999999999888
Q ss_pred CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEE-CCCCCEEEEEec
Q 011970 333 NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYI-TSDQDLIISYCK 378 (474)
Q Consensus 333 D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svaf-SpDg~~LaS~s~ 378 (474)
++.|.+||.+|+++..+..+.. +.+++| +|||+.|..++.
T Consensus 236 ~~~v~~~~~~g~~~~~~~~~~~------~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 236 GDGVHVLTPDGDELGRVLTPQT------TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp TTEEEEECTTSCEEEEEECSSC------CCEEEEESTTSCEEEEEET
T ss_pred CCeEEEECCCCCEEEEEECCCC------ceeEEEECCCCCEEEEEcC
Confidence 8899999999999999987765 368899 699998888764
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.74 E-value=4.7e-16 Score=146.35 Aligned_cols=230 Identities=10% Similarity=-0.011 Sum_probs=162.8
Q ss_pred CceEEEEeCCCCeEEE-EecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEE
Q 011970 187 WPGFVEFDDVNGKVLT-YSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 263 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~La-S~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L 263 (474)
.|..++|+ ++|++++ +.+.++.|.+||..++....... ...+..|+++|++.|.++.. ++.|.+||..++..
T Consensus 25 ~p~~i~~~-~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~---~~~i~~~d~~~~~~- 99 (270)
T 1rwi_B 25 SPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF---NNRVVTLAAGSNNQ- 99 (270)
T ss_dssp CEEEEEEC-TTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET---TTEEEEECTTCSCC-
T ss_pred CccceEEC-CCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC---CCEEEEEeCCCceE-
Confidence 67799998 7999888 66788999999976655322111 24688999998666666532 57899999866543
Q ss_pred EEEe-ecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEe
Q 011970 264 KVFY-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 340 (474)
Q Consensus 264 ~tl~-~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd 340 (474)
..+. ........+++. +++. +.++ ..++.|.+||..+.........+...+..+++.|+|+++++.. ++.|.+||
T Consensus 100 ~~~~~~~~~~p~~i~~~-~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVD-TQGA-VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp EECCCCSCSSEEEEEEC-TTCC-EEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eeeecCCcCCCcceEEC-CCCC-EEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 4443 233567888886 4444 5554 5788999998776655444444556788999999999999987 89999999
Q ss_pred CCCcEEEE-eccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccc
Q 011970 341 FRGELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDE 419 (474)
Q Consensus 341 ~~G~ll~t-l~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~ 419 (474)
.++..... ...+... ...|+++|||.+.++... ++.|.+||..+.........+
T Consensus 178 ~~~~~~~~~~~~~~~~-----p~~i~~d~~g~l~v~~~~-----------~~~v~~~~~~~~~~~~~~~~~--------- 232 (270)
T 1rwi_B 178 AESNNQVVLPFTDITA-----PWGIAVDEAGTVYVTEHN-----------TNQVVKLLAGSTTSTVLPFTG--------- 232 (270)
T ss_dssp TTTCCEEECCCSSCCS-----EEEEEECTTCCEEEEETT-----------TSCEEEECTTCSCCEECCCCS---------
T ss_pred cCCCceEeecccCCCC-----ceEEEECCCCCEEEEECC-----------CCcEEEEcCCCCcceeeccCC---------
Confidence 97543333 2233222 589999999998887654 789999997544332211111
Q ss_pred cCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 420 LGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
+..+.+++|+|||+.+++...+++|++++
T Consensus 233 -------------------------~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 233 -------------------------LNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp -------------------------CSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred -------------------------CCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 12689999999999999999999999986
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=4.7e-15 Score=147.20 Aligned_cols=253 Identities=9% Similarity=-0.026 Sum_probs=185.9
Q ss_pred EEEEEee-ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEec
Q 011970 91 VIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR 169 (474)
Q Consensus 91 V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~ 169 (474)
...|.+. +.+.++...++++.+||..|++.+.++.. ....+.|+++|+|+..++ .. .+ ..+.++|..
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~--~~~p~~i~~~~~g~lyv~-~~---~~------~~v~~iD~~ 113 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG--FTSPRYIHFLSDEKAYVT-QI---WD------YRIFIINPK 113 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC--CSSEEEEEEEETTEEEEE-EB---SC------SEEEEEETT
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC--CCCCcEEEEeCCCeEEEE-EC---CC------CeEEEEECC
Confidence 4667777 55666666789999999999999999964 255899999999954443 21 23 588889988
Q ss_pred cCCCCCccceeee-ccccCceEEEEeCCCCeEEEEec-CCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEecC
Q 011970 170 RGKPDSGFALFES-ESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRS 246 (474)
Q Consensus 170 ~G~~~~~~~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s-~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~~la~~s~~ 246 (474)
++++...+++-.. .....|..++++ +++++++.. .+++|.++|+++++.+.++. +.....++++|++.++..+..
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCC
T ss_pred CCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECC
Confidence 8876432221110 012256688884 788888765 58999999999999988886 445678999997777666432
Q ss_pred CC--------CccEEEEecCCCeEEEEEeec-CcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEe--ccccCCc
Q 011970 247 SS--------HVPLKILSIEDGTVLKVFYHL-LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV--SRTEFMT 315 (474)
Q Consensus 247 s~--------D~tIkLWdi~tG~~L~tl~~h-~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~--l~~h~~~ 315 (474)
.. ...|.++|.+++++.+++.-. ......++|+ |+++.|.+... +|.+||+.+++.... ...+...
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~-~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~ 268 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN-GTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTK 268 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC-TTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSC
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe-cCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCc
Confidence 10 268999999999999888632 2367889987 56777777644 999999999987532 2223568
Q ss_pred eEEEEEcC-CCcEEEEE----c-CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEE
Q 011970 316 PSAFIFLY-ENQLFLTF----R-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYI 366 (474)
Q Consensus 316 v~sv~Fsp-dg~llaS~----s-D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svaf 366 (474)
+..++++| +|+++++. . +++|.+||.+|+++++++--..+ +.++|
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G~~P------~~~~~ 319 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVGIIP------GAFCW 319 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEEESE------EEEEE
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEeccCc------ceEEE
Confidence 99999998 89999998 6 89999999999999988743332 46666
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=1.4e-13 Score=130.16 Aligned_cols=272 Identities=8% Similarity=0.029 Sum_probs=188.0
Q ss_pred ccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEe
Q 011970 89 TKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (474)
Q Consensus 89 ~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw 166 (474)
..+..|++. |.+.++...++.+..|+.. |+........+...+.++++.|+|..+++.. .+ ..+..+
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~----~~------~~i~~~ 83 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTEN----AA------NKIGRI 83 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEET----TT------TEEEEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCC----CC------CeEEEE
Confidence 567788887 7777776668999999988 7655433222446799999999999776521 22 355566
Q ss_pred EeccCCCCCccceeee-ccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEE-EEc--CCcEEEEEEcCCceEEE
Q 011970 167 YIRRGKPDSGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-SIS--DKHVQEIKISPGIMLLI 242 (474)
Q Consensus 167 ~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~-tl~--~~~V~~vafSpg~~la~ 242 (474)
+. .|+. ..+.. .....|..++|+ ++|+++++...++.|.+||. +++... .+. ...+..+++.|++.+.+
T Consensus 84 ~~-~g~~----~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v 156 (299)
T 2z2n_A 84 TK-KGII----KEYTLPNPDSAPYGITEG-PNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWF 156 (299)
T ss_dssp CT-TSCE----EEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEE
T ss_pred CC-CCcE----EEEeCCCcCCCceeeEEC-CCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEE
Confidence 64 3543 22221 123467789997 79999998888899999998 666543 333 35789999998666666
Q ss_pred EecCCCCccEEEEecCCCeEEEE-EeecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEe-ccccCCceEEE
Q 011970 243 FNRSSSHVPLKILSIEDGTVLKV-FYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEV-SRTEFMTPSAF 319 (474)
Q Consensus 243 ~s~~s~D~tIkLWdi~tG~~L~t-l~~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~-l~~h~~~v~sv 319 (474)
+. ..++.|..||. +|+.... +..+......+++. +++. +.++ ..++.|.+||. +++.... +..+...+.++
T Consensus 157 ~~--~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~-~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i 230 (299)
T 2z2n_A 157 TE--NQNNAIGRITE-SGDITEFKIPTPASGPVGITKG-NDDA-LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAI 230 (299)
T ss_dssp EE--TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred Ee--CCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEEC-CCCC-EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeE
Confidence 53 23468999998 8887653 33344566788875 4444 5554 56889999999 8876544 44466789999
Q ss_pred EEcCCCcEEEEEc-CCcEEEEeCCCcEEEE-eccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEe
Q 011970 320 IFLYENQLFLTFR-NRTVAVWNFRGELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSS 397 (474)
Q Consensus 320 ~Fspdg~llaS~s-D~tIklWd~~G~ll~t-l~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWd 397 (474)
++.++|+++++.. ++.|..||.+|+...- +.++... +.++++ ++|++.++.+ .+.|..+|
T Consensus 231 ~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~-----~~~i~~-~~g~l~v~~~------------~~~l~~~~ 292 (299)
T 2z2n_A 231 TAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAE-----PHGICF-DGETIWFAME------------CDKIGKLT 292 (299)
T ss_dssp EECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCC-----EEEEEE-CSSCEEEEET------------TTEEEEEE
T ss_pred EECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCc-----cceEEe-cCCCEEEEec------------CCcEEEEE
Confidence 9999999999886 8999999998764332 3333332 689999 9999998753 34555667
Q ss_pred CCCCe
Q 011970 398 ILTGK 402 (474)
Q Consensus 398 i~tG~ 402 (474)
..+++
T Consensus 293 ~~~~~ 297 (299)
T 2z2n_A 293 LIKDN 297 (299)
T ss_dssp EC---
T ss_pred cCccc
Confidence 66553
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.71 E-value=6.6e-15 Score=141.17 Aligned_cols=231 Identities=12% Similarity=0.140 Sum_probs=167.2
Q ss_pred cccCceEEEEeCCCCeEEEE-------ecCCCcEEEeecCCCeEEEEE------cCCcEEEEEEcCC-ceEEEEecCCCC
Q 011970 184 SLKWPGFVEFDDVNGKVLTY-------SAQDSIYKVFDLKNYTMLYSI------SDKHVQEIKISPG-IMLLIFNRSSSH 249 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS-------~s~D~tiKlWdl~tg~~l~tl------~~~~V~~vafSpg-~~la~~s~~s~D 249 (474)
.+..|..++|+ ++|+++++ +..++.|.+||+++++..... ....+..++++|+ +.|.++.. .
T Consensus 16 ~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---~ 91 (314)
T 1pjx_A 16 DIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---R 91 (314)
T ss_dssp CCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---T
T ss_pred cCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---C
Confidence 36678899998 79998888 678899999999898864322 2257999999987 77666643 2
Q ss_pred ccEEEEecCCCeEEEE-Eee----cCcceeEEEEEecCCCeEEEE-eCC---------------CcEEEEECCCCceEEe
Q 011970 250 VPLKILSIEDGTVLKV-FYH----LLHRNKKVDFIEQFNEKLLVK-QEN---------------ENLQILDVRNAELMEV 308 (474)
Q Consensus 250 ~tIkLWdi~tG~~L~t-l~~----h~~~v~~V~F~~~~~~~ll~~-~~D---------------~tIkIWDv~tg~~~~~ 308 (474)
..|.+||.+ |+.... ... ....+..+++. +++ .+.++ ..+ +.|..||.. ++....
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d-~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD-YEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEEC-TTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEEC-CCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 379999998 887543 221 12346788886 444 45554 444 567777766 665543
Q ss_pred ccccCCceEEEEEc----CCCc-EEEEEc-CCcEEEEeCC--Cc-----EEEEeccCC-CCcCCCCeeEEEECCCCCEEE
Q 011970 309 SRTEFMTPSAFIFL----YENQ-LFLTFR-NRTVAVWNFR--GE-----LVTSFEDHL-LWHPDCNTNNIYITSDQDLII 374 (474)
Q Consensus 309 l~~h~~~v~sv~Fs----pdg~-llaS~s-D~tIklWd~~--G~-----ll~tl~gH~-~~~~~~~v~svafSpDg~~La 374 (474)
..+...+..++|+ |||+ ++++.. ++.|.+||.+ |+ .+..+.++. .. ...++++|||++.+
T Consensus 168 -~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~-----p~~i~~d~~G~l~v 241 (314)
T 1pjx_A 168 -DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG-----ADGMDFDEDNNLLV 241 (314)
T ss_dssp -EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCE-----EEEEEEBTTCCEEE
T ss_pred -ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCC-----CCceEECCCCCEEE
Confidence 3344567899999 9996 556656 8999999974 55 344555553 22 57899999999999
Q ss_pred EEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEc
Q 011970 375 SYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD 454 (474)
Q Consensus 375 S~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafS 454 (474)
+... ++.|.+||..+|+.+..+..+.. .+.+++|+
T Consensus 242 ~~~~-----------~~~i~~~d~~~g~~~~~~~~~~~----------------------------------~~~~i~~~ 276 (314)
T 1pjx_A 242 ANWG-----------SSHIEVFGPDGGQPKMRIRCPFE----------------------------------KPSNLHFK 276 (314)
T ss_dssp EEET-----------TTEEEEECTTCBSCSEEEECSSS----------------------------------CEEEEEEC
T ss_pred EEcC-----------CCEEEEEcCCCCcEeEEEeCCCC----------------------------------CceeEEEC
Confidence 8654 78999999988998888876643 78999999
Q ss_pred CCCCEEE-EEcCCCcEEEcc
Q 011970 455 EERNEIY-TGNRHGLVHVWS 473 (474)
Q Consensus 455 pDg~~La-Sgs~DgtVklWd 473 (474)
|||+.|+ +...++.|..|+
T Consensus 277 ~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 277 PQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp TTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCCeEEEEe
Confidence 9999554 555677887775
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.71 E-value=5.9e-15 Score=152.32 Aligned_cols=254 Identities=13% Similarity=0.130 Sum_probs=179.9
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC-CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 261 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~-~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~ 261 (474)
.+..|..|+|+ ++|+++++...++.|++||++++++...+.. .... ++|+| ++.|++.... ....|.+++..++.
T Consensus 129 ~~~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~-~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 129 KFKYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWE-GTHTVYVYMKASGW 205 (409)
T ss_dssp CCCCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSS-TTCEEEEEEGGGTT
T ss_pred ccCCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecC-CCceEEEEEcCCCc
Confidence 46788899998 7999999998899999999998887665543 3334 99998 4555555332 12279999988877
Q ss_pred EEEEE----eecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEe----ccccCCc-eE-EEEEcC-CCcEEEE
Q 011970 262 VLKVF----YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV----SRTEFMT-PS-AFIFLY-ENQLFLT 330 (474)
Q Consensus 262 ~L~tl----~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~----l~~h~~~-v~-sv~Fsp-dg~llaS 330 (474)
.+..+ .........++|. |+++.|.+...++.|..||..+++.... ..++... +. .++|+| ++.++++
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~-p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALD-ETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEEC-TTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEe-CCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 66665 2234566788886 5567788876789999999998875443 3333322 34 899999 6889988
Q ss_pred Ec-CCcEEEEeCCCcEEEEeccCC---CCcC-------CCCeeEEEECCCCCEEEEEe-cCCCccccccCCCCeEEEEeC
Q 011970 331 FR-NRTVAVWNFRGELVTSFEDHL---LWHP-------DCNTNNIYITSDQDLIISYC-KAEPEDQWMEGSAGSINVSSI 398 (474)
Q Consensus 331 ~s-D~tIklWd~~G~ll~tl~gH~---~~~~-------~~~v~svafSpDg~~LaS~s-~~~~~~~~~~s~DgtIklWdi 398 (474)
-+ +++|..|+.+|+ +.++.++. .+.. -..-+.++|+|||++.++-+ . .+.|+.||+
T Consensus 285 d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----------~~~I~~~~~ 352 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----------GYCLRKLDI 352 (409)
T ss_dssp ETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----------TCEEEEEET
T ss_pred eCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----------CCEEEEEEC
Confidence 88 999999999888 55666654 0000 01147899999999888754 4 789999998
Q ss_pred CCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 399 LTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 399 ~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
.+|+ +.++.++... .+. . +. ......+...+.|+++|||+.+++-..++.|+..+
T Consensus 353 ~~G~-v~~~~g~~~~-~g~-------------~----~g-~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 353 LDGY-VSTVAGQVDV-ASQ-------------I----DG-TPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp TTTE-EEEEEECTTC-BSC-------------C----CB-STTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred CCCE-EEEEeCCCCC-CCc-------------C----CC-ChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 8887 5667676320 000 0 00 00112245789999999999999999999988654
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=1e-14 Score=137.09 Aligned_cols=236 Identities=10% Similarity=0.046 Sum_probs=163.4
Q ss_pred eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcE
Q 011970 131 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIY 210 (474)
Q Consensus 131 ~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~ti 210 (474)
...+++++|+|+.++++. ..+ ..+.+++...+.. ..+.......|..++|+ ++|+++++.. ++.|
T Consensus 25 ~p~~i~~~~~g~l~v~~~---~~~------~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~-~~g~l~v~~~-~~~i 89 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSE---GMY------GRVVKLATGSTGT----TVLPFNGLYQPQGLAVD-GAGTVYVTDF-NNRV 89 (270)
T ss_dssp CEEEEEECTTCCEEEEEC---SSS------CEEEEECC---------EECCCCSCCSCCCEEEC-TTCCEEEEET-TTEE
T ss_pred CccceEECCCCCEEEEcc---CCC------CcEEEecCCCccc----ceEeeCCcCCcceeEEC-CCCCEEEEcC-CCEE
Confidence 578999999999666221 233 4666676544332 11212234567789998 7999888777 8899
Q ss_pred EEeecCCCeEEEEEc--C-CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEE
Q 011970 211 KVFDLKNYTMLYSIS--D-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLL 287 (474)
Q Consensus 211 KlWdl~tg~~l~tl~--~-~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll 287 (474)
.+||..+.... .+. . ..+..++++|++.+.++.. .++.|.+|+..++...............+++. +++. +.
T Consensus 90 ~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~-~~g~-l~ 164 (270)
T 1rwi_B 90 VTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADR--GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD-NSGN-VY 164 (270)
T ss_dssp EEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEG--GGTEEEEECTTCCSCEECCCCSCCSCCCEEEC-TTCC-EE
T ss_pred EEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEEC--CCCEEEEEECCCceeEeeccccCCCceeEEEe-CCCC-EE
Confidence 99998765543 332 2 5799999998666666532 35689999866654433222333456788886 4454 55
Q ss_pred EE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCCCcEEEEec-cCCCCcCCCCeeEE
Q 011970 288 VK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFE-DHLLWHPDCNTNNI 364 (474)
Q Consensus 288 ~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~G~ll~tl~-gH~~~~~~~~v~sv 364 (474)
++ ..++.|.+||..++........+...+..+++.++|+++++.. ++.|.+||.+|.....+. .+... +.++
T Consensus 165 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----p~~i 239 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNT-----PLAV 239 (270)
T ss_dssp EEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSC-----EEEE
T ss_pred EEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCC-----ceeE
Confidence 54 5688999999988876665555557899999999999999988 899999999766544333 23222 5899
Q ss_pred EECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCe
Q 011970 365 YITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 402 (474)
Q Consensus 365 afSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~ 402 (474)
+|+|||+++++.+. +++|+++++...+
T Consensus 240 ~~~~~g~l~v~~~~-----------~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 240 AVDSDRTVYVADRG-----------NDRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCCEEEEEGG-----------GTEEEEECCCGGG
T ss_pred EECCCCCEEEEECC-----------CCEEEEEcCCCcc
Confidence 99999999888765 8999999986544
No 199
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.67 E-value=9.6e-14 Score=135.18 Aligned_cols=224 Identities=11% Similarity=0.112 Sum_probs=160.0
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEE
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK 264 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~ 264 (474)
..+.....|++.++.++.+...+++|..||.++++....-....+..++++|++.|+++. +..|.+||.++|+...
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATI----GTKFCALNWKEQSAVV 87 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEE----TTEEEEEETTTTEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEE----CCeEEEEECCCCcEEE
Confidence 345557888855788888888999999999998876433235789999999866666653 3579999999987643
Q ss_pred EEee----cCcceeEEEEEecCCCeEEEEe--C--------CCcEEEEECCC-CceEEeccccCCceEEEEEcCCCcEE-
Q 011970 265 VFYH----LLHRNKKVDFIEQFNEKLLVKQ--E--------NENLQILDVRN-AELMEVSRTEFMTPSAFIFLYENQLF- 328 (474)
Q Consensus 265 tl~~----h~~~v~~V~F~~~~~~~ll~~~--~--------D~tIkIWDv~t-g~~~~~l~~h~~~v~sv~Fspdg~ll- 328 (474)
.... ...+...+++. ++|. +.++. . ...-+||.+.. ++... +..+...+..++|+|||+.|
T Consensus 88 ~~~~~~~~~~~~~~di~~d-~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVD-PAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEECCTTCSSEEEEEEEEC-TTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEE
T ss_pred EEecCCCCCCCCCCCEEEC-CCCC-EEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEE
Confidence 3321 12346778876 4454 55543 2 24456776653 44433 34455678899999999855
Q ss_pred EEEc-CCcEEEEeC---CCcE-----EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCC
Q 011970 329 LTFR-NRTVAVWNF---RGEL-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 399 (474)
Q Consensus 329 aS~s-D~tIklWd~---~G~l-----l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~ 399 (474)
++.+ ++.|.+||+ +|++ +..+..+... ...+++.+||++.++... .+.|..||..
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~-----p~g~~~d~~G~lwva~~~-----------~~~v~~~d~~ 228 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQI-----PDGMCIDAEGKLWVACYN-----------GGRVIRLDPV 228 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCE-----EEEEEEBTTSCEEEEEET-----------TTEEEEECTT
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCC-----CCeeEECCCCCEEEEEcC-----------CCEEEEEcCC
Confidence 5666 899999986 3654 2334333222 478999999999888654 6889999998
Q ss_pred CCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEc-CCCCEEEEEcC
Q 011970 400 TGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD-EERNEIYTGNR 465 (474)
Q Consensus 400 tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafS-pDg~~LaSgs~ 465 (474)
||+++.++..+.. .+++++|+ ||+++|+-++.
T Consensus 229 tG~~~~~i~~p~~----------------------------------~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 229 TGKRLQTVKLPVD----------------------------------KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TCCEEEEEECSSS----------------------------------BEEEEEEESGGGCEEEEEEB
T ss_pred CceEEEEEECCCC----------------------------------CceEEEEeCCCCCEEEEEcC
Confidence 9999999987753 79999999 99998875553
No 200
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.65 E-value=5.1e-15 Score=147.58 Aligned_cols=265 Identities=10% Similarity=0.078 Sum_probs=174.2
Q ss_pred ceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceee---eccccCceEEEEeCCCCeEEEEecC
Q 011970 130 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE---SESLKWPGFVEFDDVNGKVLTYSAQ 206 (474)
Q Consensus 130 ~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~---~~~~~~~~~V~Fs~~nGk~LaS~s~ 206 (474)
.....|+++|+|+.+++...+. .+ .++||.+..|++. .++-+. .+++..|..|+|+ ++|++++..+.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~-~~-------~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d-~~g~L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFY-QP-------EMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSD-GNGIVWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGG-CC-------SCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEEC-SSSEEEEEECH
T ss_pred CCcceEEECCCCCEEEEeCCCC-CC-------ceEEEEECCCCee-cCCCcccCcccceeEeeEEEEc-CCCcEEEEcCC
Confidence 5689999999999888754322 12 1445655556542 111111 1246788899998 78998886644
Q ss_pred -----CCcEEEeecCCCeEEEEEcC--------CcEEEEEEcC-CceEEEEecC-CCCccEEEEecCCCeEEEEEeecCc
Q 011970 207 -----DSIYKVFDLKNYTMLYSISD--------KHVQEIKISP-GIMLLIFNRS-SSHVPLKILSIEDGTVLKVFYHLLH 271 (474)
Q Consensus 207 -----D~tiKlWdl~tg~~l~tl~~--------~~V~~vafSp-g~~la~~s~~-s~D~tIkLWdi~tG~~L~tl~~h~~ 271 (474)
+..|.+||+++|+.+.++.- ..+.+|+|+| ++.+.++... +.+..|.+||+++|+..+.+.+|..
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~ 166 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG 166 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc
Confidence 67899999999998776641 2468999996 5666555321 1467899999999998887765422
Q ss_pred cee-EEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC------C
Q 011970 272 RNK-KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR------G 343 (474)
Q Consensus 272 ~v~-~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~------G 343 (474)
... .+.|. +++..+...+.|++++.|.. .+..++|+|||+.|..+. ++. +||.++ +
T Consensus 167 ~~~~~~~~~-~~g~~~~~~~~~g~~~~~~~--------------~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 167 IAPEDIDLV-IDGVPVQIGQPDGTVIRPHL--------------GVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNL 230 (343)
T ss_dssp TSCCSCCCE-ETTEECBEECTTSCEECCCC--------------CEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCT
T ss_pred cccccccee-ECCEEEEeccCCCceeceec--------------ccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCC
Confidence 111 13333 23444444667888877741 367899999998777665 553 566642 1
Q ss_pred c-----EEE--EeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCC
Q 011970 344 E-----LVT--SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKV 416 (474)
Q Consensus 344 ~-----ll~--tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~ 416 (474)
. ... ...++... ...+++++||.+.++... ++.|.+||..+|+...... ..
T Consensus 231 ~~~~~~~~~~~~~~g~~g~-----pdgia~d~~G~l~va~~~-----------~~~V~~~d~~~G~~~~~~~-~~----- 288 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPI-----CDGISIDKDHNIYVGDLA-----------HSAIGVITSADRAYKLLVT-DE----- 288 (343)
T ss_dssp TCCHHHHHTTCEEEEECCS-----CSCEEECTTCCEEEEEGG-----------GTEEEEEETTTTEEEEEEE-CG-----
T ss_pred CCChhhhhcceEecccCCC-----CceEEECCCCCEEEEccC-----------CCeEEEEECCCCCEEEEEE-CC-----
Confidence 1 000 12233332 357999999999998765 8899999976787533322 11
Q ss_pred ccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcE
Q 011970 417 DDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLV 469 (474)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtV 469 (474)
.+...++|+|+|||+.+++.+..+.+
T Consensus 289 ---------------------------~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 289 ---------------------------KLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp ---------------------------GGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred ---------------------------ceecCCeeEECCCCcEEEEeCccccc
Confidence 12378999999999999988865443
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.65 E-value=1.3e-14 Score=141.90 Aligned_cols=180 Identities=9% Similarity=0.059 Sum_probs=142.5
Q ss_pred cCCceEEEEecCCCCccEEEEecCCCeEEEEEeecC-cceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecccc-
Q 011970 235 SPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLL-HRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE- 312 (474)
Q Consensus 235 Spg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~-~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h- 312 (474)
+||..|++. +.|+.|.+||.+||+.+.++..+. ..+..++++ |+| ++++ +.++.|+.||. +|+.+..+..+
T Consensus 3 ~~~~~lv~~---~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~-pdG-~ilv-s~~~~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 3 SPQHLLVGG---SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAAT-KAG-EILF-SYSKGAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp CCCEEEEEC---TTCSEEEEEETTTTEEEEEEECCTTCCCCEEEEC-TTS-CEEE-ECBSEEEEECT-TSCEEEEEECCT
T ss_pred CCCcEEEee---CCCCEEEEEECCCCeEEEEeCCCccCCCcCeEEC-CCC-CEEE-eCCCCEEEECC-CCCEEEEEcCCC
Confidence 488877764 668999999999999999999664 367888887 444 5555 56889999998 89988776654
Q ss_pred CCceEEEEEcCCCcEEEEEc--CCcEEEEeCCCcEEEEecc------CCCCcCCCCeeEEEECCCCCEEEEEecCCCccc
Q 011970 313 FMTPSAFIFLYENQLFLTFR--NRTVAVWNFRGELVTSFED------HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQ 384 (474)
Q Consensus 313 ~~~v~sv~Fspdg~llaS~s--D~tIklWd~~G~ll~tl~g------H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~ 384 (474)
...+.++.++|||+++++.+ ++.|..+|.+|+.+.++.- +..+ .+.+++.+||++|++.+.
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~-----~~~v~~~~~G~~lv~~~~------ 144 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQ-----FRQINKNKKGNYLVPLFA------ 144 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGS-----CSCCEECTTSCEEEEETT------
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCccccc-----ccCceECCCCCEEEEecC------
Confidence 35788999999999999976 4566667778999888762 2112 356789999999998765
Q ss_pred cccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEc
Q 011970 385 WMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN 464 (474)
Q Consensus 385 ~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs 464 (474)
++.|..||.. |+.+.++..+. .++++.+.|+|++|++++
T Consensus 145 -----~~~v~~~d~~-G~~~w~~~~~~-----------------------------------~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 145 -----TSEVREIAPN-GQLLNSVKLSG-----------------------------------TPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp -----TTEEEEECTT-SCEEEEEECSS-----------------------------------CCCEEEECTTSCEEEECB
T ss_pred -----CCEEEEECCC-CCEEEEEECCC-----------------------------------CccceeEcCCCCEEEEeC
Confidence 8999999986 99999997754 345678889999999888
Q ss_pred CCCcEEEcc
Q 011970 465 RHGLVHVWS 473 (474)
Q Consensus 465 ~DgtVklWd 473 (474)
.++.|..+|
T Consensus 184 ~~~~v~~~d 192 (276)
T 3no2_A 184 DAHCFVQLN 192 (276)
T ss_dssp TTSEEEEEC
T ss_pred CCCeEEEEe
Confidence 888787665
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.64 E-value=1.9e-12 Score=122.31 Aligned_cols=262 Identities=10% Similarity=0.047 Sum_probs=183.9
Q ss_pred CceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeee-ccccCceEEEEeCCCCeEEEEecCC
Q 011970 129 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQD 207 (474)
Q Consensus 129 ~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~~nGk~LaS~s~D 207 (474)
....++|++.++|...++.. .+ ..+.+++.. |+.. .+.. .....|..++++ ++|++.++...+
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~----~~------~~v~~~~~~-~~~~----~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~ 82 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQH----KA------NKISSLDQS-GRIK----EFEVPTPDAKVMCLIVS-SLGDIWFTENGA 82 (300)
T ss_dssp TCCEEEEEECTTSCEEEEET----TT------TEEEEECTT-SCEE----EEECSSTTCCEEEEEEC-TTSCEEEEETTT
T ss_pred CCCcceeeECCCCCEEEEcC----CC------CeEEEECCC-CceE----EEECCCCCCcceeEEEC-CCCCEEEEecCC
Confidence 45689999999999776521 22 466677755 6642 1221 123567789997 799998888778
Q ss_pred CcEEEeecCCCeEE-EEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEE-EeecCcceeEEEEEecCC
Q 011970 208 SIYKVFDLKNYTML-YSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKV-FYHLLHRNKKVDFIEQFN 283 (474)
Q Consensus 208 ~tiKlWdl~tg~~l-~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~t-l~~h~~~v~~V~F~~~~~ 283 (474)
+.|..+|.+ |+.. +.+. ...+..+++.|++.+.++.. .++.|..+|.. |+.... +.........+++. +++
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d-~~g 157 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQL--NGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG-SDN 157 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC-TTS
T ss_pred CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEcc--CCCeEEEECCC-CCEEEccCCCCCCCceeEEEC-CCC
Confidence 899999987 6653 3333 35799999998666666532 24679999987 776632 33334566788875 444
Q ss_pred CeEEEE-eCCCcEEEEECCCCceEEe-ccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCCCcEEEE-eccCCCCcCCC
Q 011970 284 EKLLVK-QENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTS-FEDHLLWHPDC 359 (474)
Q Consensus 284 ~~ll~~-~~D~tIkIWDv~tg~~~~~-l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~G~ll~t-l~gH~~~~~~~ 359 (474)
. +.++ ..++.|..+|. +++.... +..+...+..+++.++|+++++.. ++.|.++|.+|+.... +..+..
T Consensus 158 ~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~----- 230 (300)
T 2qc5_A 158 A-LWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNA----- 230 (300)
T ss_dssp S-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTC-----
T ss_pred C-EEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCC-----
Confidence 4 5555 46789999998 7776654 334566899999999999999887 7889999998876543 333322
Q ss_pred CeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEE-ecCCCCCCCCccccCCCCCCcccccccccccc
Q 011970 360 NTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK-INATNCSPKVDDELGSSSTGKSKKLNKSSYIR 438 (474)
Q Consensus 360 ~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (474)
.+.++++.|+|++.++... ++.|..+|. +|+.... +..+.
T Consensus 231 ~~~~i~~d~~g~l~v~~~~-----------~~~i~~~~~-~g~~~~~~~~~~~--------------------------- 271 (300)
T 2qc5_A 231 RPHAITAGKNSEIWFTEWG-----------ANQIGRITN-DNTIQEYQLQTEN--------------------------- 271 (300)
T ss_dssp CEEEEEECSTTCEEEEETT-----------TTEEEEECT-TSCEEEEECCSTT---------------------------
T ss_pred CceEEEECCCCCEEEeccC-----------CCeEEEECC-CCcEEEEECCccC---------------------------
Confidence 2589999999998887543 689999997 6765422 22111
Q ss_pred ccccccccCEEEEEEcCCCCEEEEEc
Q 011970 439 STVGEALEDITSLFYDEERNEIYTGN 464 (474)
Q Consensus 439 ~~~~~~l~~V~slafSpDg~~LaSgs 464 (474)
..+.+++++|||+..++..
T Consensus 272 -------~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 272 -------AEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp -------CCCCCEEECTTSCEEEECS
T ss_pred -------CccceeEeCCCCCEEEEcc
Confidence 1577899999999777766
No 203
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=5.6e-13 Score=144.09 Aligned_cols=258 Identities=13% Similarity=0.061 Sum_probs=183.6
Q ss_pred eEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecC--CCeEEEEEc-CCcEEEEEEc--
Q 011970 161 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSIS-DKHVQEIKIS-- 235 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~--tg~~l~tl~-~~~V~~vafS-- 235 (474)
.++.++|..+++....+ ..+ ..|..+.|| |||++|..++.|++|.+||+. +++.+.++. +..-..++||
T Consensus 177 ~~V~viD~~t~~v~~~i---~~g--~~p~~v~~S-pDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~ 250 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVL---DTG--YAVHISRLS-ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKM 250 (567)
T ss_dssp TEEEEEETTTCCEEEEE---ECS--SCEEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCS
T ss_pred CeEEEEECCCCeEEEEE---eCC--CCccceEEC-CCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccc
Confidence 68999999999874432 222 234589998 799999989999999999996 888888887 4567899999
Q ss_pred --C-CceEEEEecCCCCccEEEEecCCCeEEEEEeec-----------CcceeEEEEEecCCCeEEE-EeCCCcEEEEEC
Q 011970 236 --P-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL-----------LHRNKKVDFIEQFNEKLLV-KQENENLQILDV 300 (474)
Q Consensus 236 --p-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h-----------~~~v~~V~F~~~~~~~ll~-~~~D~tIkIWDv 300 (474)
| |.++++++. .+++|.++|..|+++++++.-. ..++..+.++ +++..+++ -.++++|.++|.
T Consensus 251 ~~pDGk~l~v~n~--~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s-~~~~~~vv~~~~~g~v~~vd~ 327 (567)
T 1qks_A 251 EGWEDKYAIAGAY--WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS-HYRPEFIVNVKETGKILLVDY 327 (567)
T ss_dssp TTCTTTEEEEEEE--ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC-SSSSEEEEEETTTTEEEEEET
T ss_pred cCCCCCEEEEEEc--cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc-CCCCEEEEEecCCCeEEEEec
Confidence 5 456666543 3578999999999999987621 1256677776 44444444 468899999999
Q ss_pred CCCceEEe-ccccCCceEEEEEcCCCcEEEEEc--CCcEEEEeCC-CcEEEEecc-CCCCcCCCCeeEEEECCCC-CEEE
Q 011970 301 RNAELMEV-SRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GELVTSFED-HLLWHPDCNTNNIYITSDQ-DLII 374 (474)
Q Consensus 301 ~tg~~~~~-l~~h~~~v~sv~Fspdg~llaS~s--D~tIklWd~~-G~ll~tl~g-H~~~~~~~~v~svafSpDg-~~La 374 (474)
.+.+.+.+ .......+..+.|+|||++|+.+. +++|.++|.. ++++.++.- -..+|+.-..+ .++|++ .+.+
T Consensus 328 ~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~--~~~p~~g~v~~ 405 (567)
T 1qks_A 328 TDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN--FVHPTFGPVWA 405 (567)
T ss_dssp TCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE--EEETTTEEEEE
T ss_pred CCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee--eECCCCCcEEE
Confidence 87654332 122334577889999999887765 8899999994 999888764 33444422222 368984 4545
Q ss_pred EEecCCCccccccCCCCeEEEEeCCC-------CeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccC
Q 011970 375 SYCKAEPEDQWMEGSAGSINVSSILT-------GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALED 447 (474)
Q Consensus 375 S~s~~~~~~~~~~s~DgtIklWdi~t-------G~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 447 (474)
+.. ..+++|-++|..+ -+.++++.+... .
T Consensus 406 t~~----------~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~----------------------------------g 441 (567)
T 1qks_A 406 TSH----------MGDDSVALIGTDPEGHPDNAWKILDSFPALGG----------------------------------G 441 (567)
T ss_dssp EEB----------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCS----------------------------------C
T ss_pred eCC----------CCCCeEEEecCCCCCCccccCEEEEEEecCCC----------------------------------C
Confidence 542 1378999999988 567888876532 1
Q ss_pred EEEEEEcCCCCEEEEEcC-------CCcEEEcc
Q 011970 448 ITSLFYDEERNEIYTGNR-------HGLVHVWS 473 (474)
Q Consensus 448 V~slafSpDg~~LaSgs~-------DgtVklWd 473 (474)
=.-+.++|||+.|+.... .++|.|.|
T Consensus 442 ~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 442 SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp CCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred CEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 012678999999998763 35787776
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.59 E-value=6e-12 Score=128.55 Aligned_cols=266 Identities=7% Similarity=-0.060 Sum_probs=178.0
Q ss_pred eEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEee------cCCCccceeeeEEEEeEeccCCCCCccceeee
Q 011970 109 VCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVY------ASDNFSSLKCRSTKIEYIRRGKPDSGFALFES 182 (474)
Q Consensus 109 tiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~------~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~ 182 (474)
+|.++|..+++.+.++..+. .. .++|||||+.|..+..+ |..+ .++.++|..+++..+.+++-..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~-~p--~i~~spDg~~lyv~n~~~~~~~rg~~~------~~v~viD~~t~~~~~~i~~~~~ 118 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGF-LP--NPVAAHSGSEFALASTSFSRIAKGKRT------DYVEVFDPVTFLPIADIELPDA 118 (373)
T ss_pred EEEEEECCCCeEEEEecCCC-CC--CeEECCCCCEEEEEeccccccccCCCC------CeEEEEECCCCcEEEEEECCCc
Confidence 89999999999999987532 33 99999999998876532 1122 4778888887776544332100
Q ss_pred c---cccCceEEEEeCCCCeEEEEecC--CCcEEEeecCCCeEEEE-EcCCcEEEEEEcC-CceEEEEecCCCCccEEEE
Q 011970 183 E---SLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYS-ISDKHVQEIKISP-GIMLLIFNRSSSHVPLKIL 255 (474)
Q Consensus 183 ~---~~~~~~~V~Fs~~nGk~LaS~s~--D~tiKlWdl~tg~~l~t-l~~~~V~~vafSp-g~~la~~s~~s~D~tIkLW 255 (474)
. ...+|..++|| |||++|..+.. +.+|-++| ++++.+.+ +.-.. .+.+.| +.....+. ..|+.+.++
T Consensus 119 ~~~~~g~~p~~~~~s-pDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~--~~~~~~~~~~~~~~~--~~dg~~~~v 192 (373)
T 2mad_H 119 PRFDVGPYSWMNANT-PNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT--CYHIHPGAPSTFYLL--CAQGGLAKT 192 (373)
T ss_pred cccccCCCccceEEC-CCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc--eEEEEeCCCceEEEE--cCCCCEEEE
Confidence 0 12457789998 79999887764 57899999 99999888 75322 144554 33333222 347889999
Q ss_pred ecCCCeEEEEEe------ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCce--EEecc-------cc---CCceE
Q 011970 256 SIEDGTVLKVFY------HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAEL--MEVSR-------TE---FMTPS 317 (474)
Q Consensus 256 di~tG~~L~tl~------~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~--~~~l~-------~h---~~~v~ 317 (474)
|. +|+...... +.........|. ++++.++..+.++++.+.|+.++.. +..+. .. .....
T Consensus 193 d~-~g~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 270 (373)
T 2mad_H 193 DH-AGGAAGAGLVGAMLTAAQNLLTQPAQA-NKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQ 270 (373)
T ss_pred EC-CCcEEEEEeccccccCCcceeecceeE-ecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceE
Confidence 99 988774322 111111224455 3456655555778999999976632 22211 00 11233
Q ss_pred EEEEcCCCcEEEEEc-----------CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCC-EEEEEecCCCccc
Q 011970 318 AFIFLYENQLFLTFR-----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQ 384 (474)
Q Consensus 318 sv~Fspdg~llaS~s-----------D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~-~LaS~s~~~~~~~ 384 (474)
.++|+||++.+-.+. +++|.+.|.. ++.++++..-.. .+.++|||||+ ++.++..
T Consensus 271 ~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~------p~~i~~s~Dg~~~l~v~~~------ 338 (373)
T 2mad_H 271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHD------VDAISVAQDGGPDLYALSA------ 338 (373)
T ss_pred eEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCC------cCeEEECCCCCeEEEEEcC------
Confidence 478899977665543 2479999995 999898864332 36899999999 7777542
Q ss_pred cccCCCCeEEEEeCCCCeEEEEe
Q 011970 385 WMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 385 ~~~s~DgtIklWdi~tG~cl~tl 407 (474)
.+++|-++|+.|++.++++
T Consensus 339 ----~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 339 ----GTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ----CCCeEEEEECCCCCEEeee
Confidence 2799999999999999985
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.58 E-value=5.6e-12 Score=128.78 Aligned_cols=283 Identities=9% Similarity=0.056 Sum_probs=179.0
Q ss_pred EEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec----------
Q 011970 136 FYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA---------- 205 (474)
Q Consensus 136 ~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s---------- 205 (474)
...|+++.+-.+... ..+ .+. ++.++|..+++....++ .+ ..+ .++|| |||+.|..+.
T Consensus 27 ~~~~~~~~~yv~~~~-~~~--~~~--~v~v~D~~t~~~~~~i~---~g--~~p-~i~~s-pDg~~lyv~n~~~~~~~rg~ 94 (373)
T 2mad_H 27 APGADGRRSYINLPA-HHS--AII--QQWVLDAGSGSILGHVN---GG--FLP-NPVAA-HSGSEFALASTSFSRIAKGK 94 (373)
T ss_pred cCCCCCCEEEEeCCc-ccC--Ccc--EEEEEECCCCeEEEEec---CC--CCC-CeEEC-CCCCEEEEEeccccccccCC
Confidence 345777755442210 122 222 77888888888643222 12 234 79998 7999887765
Q ss_pred CCCcEEEeecCCCeEEEEEcC---------CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEE-EeecCccee
Q 011970 206 QDSIYKVFDLKNYTMLYSISD---------KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV-FYHLLHRNK 274 (474)
Q Consensus 206 ~D~tiKlWdl~tg~~l~tl~~---------~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~t-l~~h~~~v~ 274 (474)
.+++|-+||+++++.+.++.- ..-..++||| |.+|++++. ..+..|.++| ++|+.+.+ +.-. .
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~-~~~~~v~viD-~t~~~~~~~i~~~----~ 168 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQF-AAGPAVGLVV-QGGSSDDQLLSSP----T 168 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEec-CCCCeEEEEE-CCCCEEeEEcCCC----c
Confidence 368899999999998887752 2345799998 555555532 2246799999 99999988 6521 1
Q ss_pred EEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecc-----ccCCce-EEEEEcCCCcEEEEE-cCCcEEEEeCC-C--c
Q 011970 275 KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR-----TEFMTP-SAFIFLYENQLFLTF-RNRTVAVWNFR-G--E 344 (474)
Q Consensus 275 ~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~-----~h~~~v-~sv~Fspdg~llaS~-sD~tIklWd~~-G--~ 344 (474)
.+.+.+..+..+++.+.|+.+..+|. +++...... .....+ ....|++++..++-. ..++|.+.|+. + +
T Consensus 169 ~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~ 247 (373)
T 2mad_H 169 CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT 247 (373)
T ss_pred eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce
Confidence 24555433344455678999999999 887763311 111111 223566665444333 47889999985 3 2
Q ss_pred EEEEecc------CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCcc
Q 011970 345 LVTSFED------HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDD 418 (474)
Q Consensus 345 ll~tl~g------H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~ 418 (474)
.+.+++- ...|.++. ...++|+|||+.|..+.....+.. -...+++|-+.|+.|++.+++|..-.
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g-~~~~~~s~d~~~lyV~~~~~~~~~-~~~~~~~V~VID~~t~~vv~~i~~g~------- 318 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGG-WQQVAYLKSSDGIYLLTSEQSAWK-LHAAAKEVTSVTGLVGQTSSQISLGH------- 318 (373)
T ss_pred EeeeeeecCCcccccceecCc-eEeEEECCCCCEEEEEeccCCccc-ccCCCCeEEEEECCCCEEEEEEECCC-------
Confidence 3344431 11222221 244889999998776543100000 00124689999999999999995432
Q ss_pred ccCCCCCCccccccccccccccccccccCEEEEEEcCCCC-EEEEEc-CCCcEEEccC
Q 011970 419 ELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN-EIYTGN-RHGLVHVWSN 474 (474)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~-~LaSgs-~DgtVklWd~ 474 (474)
..++++|+|||+ .||+++ .+++|.++|.
T Consensus 319 ----------------------------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 319 ----------------------------DVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred ----------------------------CcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 467899999999 899998 5999999973
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.58 E-value=3.7e-13 Score=147.08 Aligned_cols=253 Identities=12% Similarity=0.067 Sum_probs=171.7
Q ss_pred CCceEEEEEEeeCCCEEEEEEe-ecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecC
Q 011970 128 PDEVIRSLFYNKNNDSLITVSV-YASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQ 206 (474)
Q Consensus 128 ~~~~i~sv~fspdg~~Lis~S~-~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~ 206 (474)
+...+.++.|||||+.||-+.. .|++. .+++++|+.+|+... . .....+ ...++|+ ||+.|++++.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~------~~i~v~dl~tg~~~~---~-~~~~~k-~~~~~Ws--Dg~~l~y~~~ 193 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDW------REIHLMDVESKQPLE---T-PLKDVK-FSGISWL--GNEGFFYSSY 193 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCE------EEEEEEETTTCSEEE---E-EEEEEE-SCCCEEE--TTTEEEEEES
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCce------EEEEEEECCCCCCCc---c-ccCCce-eccEEEe--CCCEEEEEEe
Confidence 4457899999999999886554 34455 689999999998622 1 111111 1368897 8999999998
Q ss_pred CCc-------------EEEeecCCCe----EEEEEcC---CcEEEEEEcCCc-eEEEEecC-CCCccEEEEecCCCe-EE
Q 011970 207 DSI-------------YKVFDLKNYT----MLYSISD---KHVQEIKISPGI-MLLIFNRS-SSHVPLKILSIEDGT-VL 263 (474)
Q Consensus 207 D~t-------------iKlWdl~tg~----~l~tl~~---~~V~~vafSpg~-~la~~s~~-s~D~tIkLWdi~tG~-~L 263 (474)
|.+ |++|++.++. +++...+ ..+.++.+||++ .|+..... .....|.+||+.+++ .+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~ 273 (693)
T 3iuj_A 194 DKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL 273 (693)
T ss_dssp SCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC
T ss_pred cCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce
Confidence 854 9999998765 4555444 357899999855 45444322 233579999998874 45
Q ss_pred EEEeecCcceeEEEEEecCCCeEEEEe-C---CCcEEEEECCCCce--EEeccccCCceEEEEEcCCCcEEEEEc--CC-
Q 011970 264 KVFYHLLHRNKKVDFIEQFNEKLLVKQ-E---NENLQILDVRNAEL--MEVSRTEFMTPSAFIFLYENQLFLTFR--NR- 334 (474)
Q Consensus 264 ~tl~~h~~~v~~V~F~~~~~~~ll~~~-~---D~tIkIWDv~tg~~--~~~l~~h~~~v~sv~Fspdg~llaS~s--D~- 334 (474)
+.+..+......+ +. +++++|+..+ . ...|..+|+.++++ .+.+..|...+. .|+|+++.|+... |+
T Consensus 274 ~~l~~~~~~~~~~-~~-~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~ 349 (693)
T 3iuj_A 274 LTVQGDLDADVSL-VD-NKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDAT 349 (693)
T ss_dssp EEEECSSSSCEEE-EE-EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTE
T ss_pred EEEeCCCCceEEE-Ee-ccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCe
Confidence 6676655555554 33 5578877754 3 36799999998875 344555655555 8899998877665 55
Q ss_pred -cEEEEeCCCcEEEEecc-CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 335 -TVAVWNFRGELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 335 -tIklWd~~G~ll~tl~g-H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
.|++||++|...+.+.- +... +..+.++||++.|+....+ ...-++|..||+.+|+. ..|...
T Consensus 350 ~~l~~~d~~g~~~~~l~~p~~~~-----~~~~~~~~d~~~l~~~~ss-------~~tP~~l~~~d~~~g~~-~~l~~~ 414 (693)
T 3iuj_A 350 ARVEQFDYEGKRVREVALPGLGS-----VSGFNGKHDDPALYFGFEN-------YAQPPTLYRFEPKSGAI-SLYRAS 414 (693)
T ss_dssp EEEEEECTTSCEEEEECCSSSSE-----EEECCCCTTCSCEEEEEEC-------SSSCCEEEEECTTTCCE-EEEECC
T ss_pred eEEEEEECCCCeeEEeecCCCce-----EEeeecCCCCCEEEEEecC-------CCCCCEEEEEECCCCeE-EEEEeC
Confidence 78999998777666642 2222 5677888998877654331 11248999999988874 455443
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.57 E-value=1.6e-12 Score=124.51 Aligned_cols=235 Identities=12% Similarity=0.095 Sum_probs=158.6
Q ss_pred EEEEEee--ccEEEE-------eeCCCeEEeeeccccceeeEeec---CCCceEEEEEEeeC-CCEEEEEEeecCCCccc
Q 011970 91 VIEIVAA--RDIVFA-------LAHSGVCAAFSRETNRRICFLNV---SPDEVIRSLFYNKN-NDSLITVSVYASDNFSS 157 (474)
Q Consensus 91 V~~i~~s--~~~las-------~s~dgtiklW~~~tg~~l~~l~g---~~~~~i~sv~fspd-g~~Lis~S~~~s~d~s~ 157 (474)
...+++. +.++++ ...++.+..|+..+|+....... .+...+.+++++|+ |+.+++.. .
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~----~---- 91 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM----R---- 91 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET----T----
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC----C----
Confidence 3566665 667777 67899999999888886543320 12356899999999 77555421 2
Q ss_pred eeeeEEEEeEeccCCCCCc-cceeeeccccCceEEEEeCCCCeEEEEecCC---------------CcEEEeecCCCeEE
Q 011970 158 LKCRSTKIEYIRRGKPDSG-FALFESESLKWPGFVEFDDVNGKVLTYSAQD---------------SIYKVFDLKNYTML 221 (474)
Q Consensus 158 Lk~~~~~iw~i~~G~~~~~-~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D---------------~tiKlWdl~tg~~l 221 (474)
..+.+++.. |++..- ...........|..++|+ ++|+++++...+ +.|..||.+ ++..
T Consensus 92 ---~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (314)
T 1pjx_A 92 ---LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD-YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI 165 (314)
T ss_dssp ---TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEEC-TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred ---CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEEC-CCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Confidence 256677866 775211 010111123457789998 799988877655 456667765 6654
Q ss_pred EEEc-CCcEEEEEEc----CCc-eEEEEecCCCCccEEEEecC-CCeE-----EEEEeecC-cceeEEEEEecCCCeEEE
Q 011970 222 YSIS-DKHVQEIKIS----PGI-MLLIFNRSSSHVPLKILSIE-DGTV-----LKVFYHLL-HRNKKVDFIEQFNEKLLV 288 (474)
Q Consensus 222 ~tl~-~~~V~~vafS----pg~-~la~~s~~s~D~tIkLWdi~-tG~~-----L~tl~~h~-~~v~~V~F~~~~~~~ll~ 288 (474)
.... ......++|+ |++ .|.++. ..++.|.+||+. +|+. +..+.++. .....+++. +++..+++
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~ 242 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAE--TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD-EDNNLLVA 242 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEE--TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB-TTCCEEEE
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEE--CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC-CCCCEEEE
Confidence 4333 2457889999 976 455553 335789999987 6763 33344333 456778876 44544444
Q ss_pred EeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCc-EEEEEc-CCcEEEEeCC
Q 011970 289 KQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR 342 (474)
Q Consensus 289 ~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~-llaS~s-D~tIklWd~~ 342 (474)
...++.|.+||..+++.+..+..+...+.+++|+|||+ ++++.. ++.|..+++.
T Consensus 243 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 243 NWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 56789999999998888777666777899999999999 666766 7899999974
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.57 E-value=1.5e-11 Score=116.13 Aligned_cols=229 Identities=13% Similarity=0.042 Sum_probs=167.3
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEE-EEc--CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCe
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-SIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT 261 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~-tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~ 261 (474)
...|..++++ ++|++.++...++.|.+||.+ ++... .+. ...+..|++.|++.+.++. ..++.|..+|.. |+
T Consensus 19 ~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~--~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 19 DSGPYGITSS-EDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTE--NGANKIGKLSKK-GG 93 (300)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEE--TTTTEEEEECTT-SC
T ss_pred CCCcceeeEC-CCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEe--cCCCeEEEECCC-CC
Confidence 3467789997 799999988888999999988 66543 333 2579999999866666653 335679999987 77
Q ss_pred EEEEEe--ecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEe-ccccCCceEEEEEcCCCcEEEEEc-CCcE
Q 011970 262 VLKVFY--HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTV 336 (474)
Q Consensus 262 ~L~tl~--~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~-l~~h~~~v~sv~Fspdg~llaS~s-D~tI 336 (474)
.. .+. ........+++. ++ +.+.++ ..++.|..+|.. ++.... +......+..+++.++|+++++.. ++.|
T Consensus 94 ~~-~~~~~~~~~~~~~i~~~-~~-g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 94 FT-EYPLPQPDSGPYGITEG-LN-GDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp EE-EEECSSTTCCEEEEEEC-ST-TCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred eE-EecCCCCCCCCccceEC-CC-CCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 63 333 233567888875 44 455554 458899999987 776643 344556899999999999999887 8899
Q ss_pred EEEeCCCcEEEE-eccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEE-ecCCCCCC
Q 011970 337 AVWNFRGELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK-INATNCSP 414 (474)
Q Consensus 337 klWd~~G~ll~t-l~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~t-l~gH~~~~ 414 (474)
..+|.+|+.... +..+.. ....+++.|+|++.++... .+.|.++|. +|+.... +..+.
T Consensus 170 ~~~~~~g~~~~~~~~~~~~-----~~~~i~~d~~g~l~v~~~~-----------~~~i~~~~~-~g~~~~~~~~~~~--- 229 (300)
T 2qc5_A 170 GRITNTGKLEEYPLPTNAA-----APVGITSGNDGALWFVEIM-----------GNKIGRITT-TGEISEYDIPTPN--- 229 (300)
T ss_dssp EEECTTCCEEEEECSSTTC-----CEEEEEECTTSSEEEEETT-----------TTEEEEECT-TCCEEEEECSSTT---
T ss_pred EEECCCCcEEEeeCCCCCC-----CcceEEECCCCCEEEEccC-----------CCEEEEEcC-CCcEEEEECCCCC---
Confidence 999998876542 222222 2689999999999887543 678999997 7776543 22222
Q ss_pred CCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 415 KVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
..+.+++++|+|+..++...++.|..++
T Consensus 230 -------------------------------~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 230 -------------------------------ARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp -------------------------------CCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred -------------------------------CCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 1688999999999888877778888775
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.56 E-value=5.4e-12 Score=124.96 Aligned_cols=220 Identities=9% Similarity=0.025 Sum_probs=152.0
Q ss_pred CceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEE
Q 011970 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl 266 (474)
.+....|++.++.++.++..++.|.+||.++++....-....|.+++++|++.++++.. ..|.+||.++|+.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~~----~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIASD----DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEET----TEEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEEC----CCEEEEECCCCcEEEEe
Confidence 34468898434777888888999999999988754322356899999998666666542 34999999999864332
Q ss_pred ee---c-CcceeEEEEEecCCCeEEEEeC-----CCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEE-EEEc-CCc
Q 011970 267 YH---L-LHRNKKVDFIEQFNEKLLVKQE-----NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLF-LTFR-NRT 335 (474)
Q Consensus 267 ~~---h-~~~v~~V~F~~~~~~~ll~~~~-----D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~ll-aS~s-D~t 335 (474)
.. + ...+..+.+. ++|. +.++.. ..+..||.+.+++.... ..+...+..++|+|||+.| ++.+ ++.
T Consensus 126 ~~~~~~~~~~~~~i~~d-~~G~-l~v~~~~~~~~~~~~~l~~~~~g~~~~~-~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMH-PSGA-LWIGTMGRKAETGAGSIYHVAKGKVTKL-FADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp CSSTTCTTEEEEEEEEC-TTSC-EEEEEEETTCCTTCEEEEEEETTEEEEE-EEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eCCCCCCCCCCCCEEEC-CCCC-EEEEeCCCcCCCCceEEEEEeCCcEEEe-eCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 21 1 2356788876 4454 555432 13445554446665443 3344567899999999855 5555 889
Q ss_pred EEEEeCC---C-c-----EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEE
Q 011970 336 VAVWNFR---G-E-----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK 406 (474)
Q Consensus 336 IklWd~~---G-~-----ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~t 406 (474)
|.+||++ | + .+..+.++... ...+++.+||.+.++... ++.|..||. +|+.+.+
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~-----p~gi~~d~~G~lwva~~~-----------~~~v~~~d~-~g~~~~~ 265 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGG-----MDGSVCDAEGHIWNARWG-----------EGAVDRYDT-DGNHIAR 265 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSE-----EEEEEECTTSCEEEEEET-----------TTEEEEECT-TCCEEEE
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCC-----CCeeEECCCCCEEEEEeC-----------CCEEEEECC-CCCEEEE
Confidence 9999973 6 3 23344433222 478999999999887643 688999997 8999888
Q ss_pred ecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEc-CCCCEEEEEc
Q 011970 407 INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD-EERNEIYTGN 464 (474)
Q Consensus 407 l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafS-pDg~~LaSgs 464 (474)
+..+.. .+++++|+ ||++.|+.++
T Consensus 266 i~~~~~----------------------------------~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 266 YEVPGK----------------------------------QTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EECSCS----------------------------------BEEEEEEESTTSCEEEEEE
T ss_pred EECCCC----------------------------------CcEEEEEecCCCCEEEEEe
Confidence 876653 79999999 9998876544
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.56 E-value=2.6e-12 Score=133.24 Aligned_cols=282 Identities=11% Similarity=0.103 Sum_probs=186.0
Q ss_pred ccEEEEeeC-----CCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeec------CCCccceeeeEEEEe
Q 011970 98 RDIVFALAH-----SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYA------SDNFSSLKCRSTKIE 166 (474)
Q Consensus 98 ~~~las~s~-----dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~------s~d~s~Lk~~~~~iw 166 (474)
+..++.... ++++.+.|..|++.+.++..+. .. . +++||||+.|..++.+. ..+ ..+.++
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~-~P-~-va~spDG~~lyVan~~~~r~~~G~~~------~~Vsvi 114 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF-LP-N-PVVADDGSFIAHASTVFSRIARGERT------DYVEVF 114 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS-SC-E-EEECTTSSCEEEEEEEEEETTEEEEE------EEEEEE
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCC-CC-c-EEECCCCCEEEEEcccccccccCCCC------CEEEEE
Confidence 455555544 6899999999999999998644 44 4 99999999987766432 122 579999
Q ss_pred EeccCCCCCccceeee---ccccCceEEEEeCCCCeEEEEec--CCCcEEEeecCCCeEEEEEcCCcEEEEEEcCC-ceE
Q 011970 167 YIRRGKPDSGFALFES---ESLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTMLYSISDKHVQEIKISPG-IML 240 (474)
Q Consensus 167 ~i~~G~~~~~~~lf~~---~~~~~~~~V~Fs~~nGk~LaS~s--~D~tiKlWdl~tg~~l~tl~~~~V~~vafSpg-~~l 240 (474)
|..+++....+++-.. ....+|..++|+ |||++|..+. .+++|-|+|+++++.+.++.-... ...+..| ..+
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~s-pDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~~ 192 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLT-PDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTF 192 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEEC-TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEc-CCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceeecCCCcee
Confidence 9999887554332110 012367789998 7999776654 378999999999999999863222 1222222 233
Q ss_pred EEEecCCCCccEEEEecCC-CeEEEEEeecC----cce-eEEEEEecCCCeEEEEeCCCcEEEEECCCCce--EEecc--
Q 011970 241 LIFNRSSSHVPLKILSIED-GTVLKVFYHLL----HRN-KKVDFIEQFNEKLLVKQENENLQILDVRNAEL--MEVSR-- 310 (474)
Q Consensus 241 a~~s~~s~D~tIkLWdi~t-G~~L~tl~~h~----~~v-~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~--~~~l~-- 310 (474)
++. +.|+.+-+.++.+ |+...+...+. ..+ ..+.|..+ +++++..+.+++|.+.|+.++.. +....
T Consensus 193 ~~~---~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~-dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~ 268 (386)
T 3sjl_D 193 FMH---CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK-AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEAL 268 (386)
T ss_dssp EEE---ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT-TTEEEEEBTTSEEEEEECTTSSCEECCCEESS
T ss_pred EEE---CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC-CCcEEEEeCCCEEEEEECCCCcceeecceecc
Confidence 333 2256666777765 66644332221 112 12455534 45777777789999999987653 21110
Q ss_pred -------c-cCCceEEEEEcCCCcEEEEEc-C----------CcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCC
Q 011970 311 -------T-EFMTPSAFIFLYENQLFLTFR-N----------RTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQ 370 (474)
Q Consensus 311 -------~-h~~~v~sv~Fspdg~llaS~s-D----------~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg 370 (474)
+ .......++++|+++.+-... + ++|-+-|+ +++.++++.--.. +++|+|||||
T Consensus 269 ~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~------~~~lavs~D~ 342 (386)
T 3sjl_D 269 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE------IDSINVSQDE 342 (386)
T ss_dssp CHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE------ECEEEECSSS
T ss_pred ccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC------cceEEECCCC
Confidence 0 011222467788877766543 1 47889999 4999988763221 5799999999
Q ss_pred C-EEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 371 D-LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 371 ~-~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
+ +|.+.+. .+++|-+.|..||+.++++..-
T Consensus 343 ~~~ly~tn~----------~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 343 KPLLYALST----------GDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp SCEEEEEET----------TTTEEEEEETTTCCEEEEECCC
T ss_pred CeEEEEEcC----------CCCeEEEEECCCCcEEEEecCC
Confidence 7 6666543 3899999999999999999653
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=2.7e-13 Score=148.25 Aligned_cols=234 Identities=9% Similarity=0.091 Sum_probs=156.4
Q ss_pred CceEEEEeCCCCeEEEE-----ecCCCcEEEeecCCCeEEEE-EcCCcEEEEEEcCCceEEEEecCC----------CCc
Q 011970 187 WPGFVEFDDVNGKVLTY-----SAQDSIYKVFDLKNYTMLYS-ISDKHVQEIKISPGIMLLIFNRSS----------SHV 250 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS-----~s~D~tiKlWdl~tg~~l~t-l~~~~V~~vafSpg~~la~~s~~s----------~D~ 250 (474)
.+..++|| |||+.||+ |+.+.+|+|||+++|+.+.. +......+++||+|..|+...... ...
T Consensus 130 ~l~~~~~S-pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~ 208 (693)
T 3iuj_A 130 ALDQLSFS-RDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTDQH 208 (693)
T ss_dssp EEEEEEEC-TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEETTTEEEEEESSCCC-------CCCC
T ss_pred EEEEEEEC-CCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEeCCCEEEEEEecCcccccccccCCCc
Confidence 44578998 79999995 44457999999999996543 322223578899555566554321 113
Q ss_pred cEEEEecCCCe----EEEEEee-cCcceeEEEEEecCCCeEEEEe----CCCcEEEEECCCCc-eEEeccccCCceEEEE
Q 011970 251 PLKILSIEDGT----VLKVFYH-LLHRNKKVDFIEQFNEKLLVKQ----ENENLQILDVRNAE-LMEVSRTEFMTPSAFI 320 (474)
Q Consensus 251 tIkLWdi~tG~----~L~tl~~-h~~~v~~V~F~~~~~~~ll~~~----~D~tIkIWDv~tg~-~~~~l~~h~~~v~sv~ 320 (474)
.|++|++.+++ ++..... |......+.|+ |++.+|++.. .+..|.+||+.+++ ..+.+..+........
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~ 287 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVT-EDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLV 287 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEEC-TTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEE
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEc-CCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEE
Confidence 49999998875 3433333 44456788886 7788887653 23589999998874 3445556666666664
Q ss_pred EcCCCcEEEEEc-C---CcEEEEeCC-CcE--EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCC--
Q 011970 321 FLYENQLFLTFR-N---RTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG-- 391 (474)
Q Consensus 321 Fspdg~llaS~s-D---~tIklWd~~-G~l--l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dg-- 391 (474)
.++++++++..+ | ..|.+||++ +++ .++|..|... +. .|+|+|+.|+.... .++
T Consensus 288 ~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-----~~--~~s~~g~~lv~~~~----------~~g~~ 350 (693)
T 3iuj_A 288 DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-----VL--TVHSGSGYLFAEYM----------VDATA 350 (693)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-----CE--EEEEETTEEEEEEE----------ETTEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-----EE--EEEEECCEEEEEEE----------ECCee
Confidence 455666666665 4 578899995 554 4677777664 23 89999999887664 133
Q ss_pred eEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCC----C
Q 011970 392 SINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRH----G 467 (474)
Q Consensus 392 tIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~D----g 467 (474)
.|++||+. |+.+..+.-... ..|..+.++||++.|+-...+ +
T Consensus 351 ~l~~~d~~-g~~~~~l~~p~~---------------------------------~~~~~~~~~~d~~~l~~~~ss~~tP~ 396 (693)
T 3iuj_A 351 RVEQFDYE-GKRVREVALPGL---------------------------------GSVSGFNGKHDDPALYFGFENYAQPP 396 (693)
T ss_dssp EEEEECTT-SCEEEEECCSSS---------------------------------SEEEECCCCTTCSCEEEEEECSSSCC
T ss_pred EEEEEECC-CCeeEEeecCCC---------------------------------ceEEeeecCCCCCEEEEEecCCCCCC
Confidence 79999986 555566642211 157778889999887765544 6
Q ss_pred cEEEcc
Q 011970 468 LVHVWS 473 (474)
Q Consensus 468 tVklWd 473 (474)
+|.+||
T Consensus 397 ~l~~~d 402 (693)
T 3iuj_A 397 TLYRFE 402 (693)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 777776
No 212
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.52 E-value=2.1e-12 Score=142.27 Aligned_cols=281 Identities=12% Similarity=0.098 Sum_probs=183.3
Q ss_pred eccEEEEeeCCCeEEeeeccccceeeEeecCCCc----------eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEe
Q 011970 97 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDE----------VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (474)
Q Consensus 97 s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~----------~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw 166 (474)
.+++|+.++.++.+..+|..||+.+=........ .-+++++ ++..|+.++ .| ..+..+
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~----~d------g~l~Al 136 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGV----LD------GRLEAI 136 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC----TT------SEEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEc----cC------CEEEEE
Confidence 4788999999999999999999998776542211 0122333 355666543 34 467778
Q ss_pred EeccCCCCCccceeeeccc---cCceEEEEeC--CCCeEEEEec-----CCCcEEEeecCCCeEEEEEcC----------
Q 011970 167 YIRRGKPDSGFALFESESL---KWPGFVEFDD--VNGKVLTYSA-----QDSIYKVFDLKNYTMLYSISD---------- 226 (474)
Q Consensus 167 ~i~~G~~~~~~~lf~~~~~---~~~~~V~Fs~--~nGk~LaS~s-----~D~tiKlWdl~tg~~l~tl~~---------- 226 (474)
|..+|+. +|..... .....+..+| .+|++++..+ .|+.|..||++||+++.++..
T Consensus 137 Da~TG~~-----~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~ 211 (689)
T 1yiq_A 137 DAKTGQR-----AWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPE 211 (689)
T ss_dssp ETTTCCE-----EEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCC
T ss_pred ECCCCCE-----eeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccc
Confidence 8889986 3443211 0001111110 1687777544 379999999999999877641
Q ss_pred ----------------------CcEE-EEEEcC-CceEEEEecCC------------CC----ccEEEEecCCCeEEEEE
Q 011970 227 ----------------------KHVQ-EIKISP-GIMLLIFNRSS------------SH----VPLKILSIEDGTVLKVF 266 (474)
Q Consensus 227 ----------------------~~V~-~vafSp-g~~la~~s~~s------------~D----~tIkLWdi~tG~~L~tl 266 (474)
..+| .++++| ++++.+....+ +| ..|.-||.+||+.+-.+
T Consensus 212 ~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~ 291 (689)
T 1yiq_A 212 GKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHY 291 (689)
T ss_dssp SHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEE
T ss_pred cccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEee
Confidence 0122 578887 56655543211 01 14999999999999988
Q ss_pred eecCccee------EEEEE--ecCCC---eEEEEeCCCcEEEEECCCCceEEecc-ccCCce------------------
Q 011970 267 YHLLHRNK------KVDFI--EQFNE---KLLVKQENENLQILDVRNAELMEVSR-TEFMTP------------------ 316 (474)
Q Consensus 267 ~~h~~~v~------~V~F~--~~~~~---~ll~~~~D~tIkIWDv~tg~~~~~l~-~h~~~v------------------ 316 (474)
+...+..+ .+.+. +.++. .+++++.|+.+.++|.++|+++.... .+..+.
T Consensus 292 ~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~ 371 (689)
T 1yiq_A 292 QTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAA 371 (689)
T ss_dssp ESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHC
T ss_pred ecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhcc
Confidence 74212111 11111 12232 46667899999999999999873210 000000
Q ss_pred --------------------EEEEEcCCCcEEEEEc--------------------------------------------
Q 011970 317 --------------------SAFIFLYENQLFLTFR-------------------------------------------- 332 (474)
Q Consensus 317 --------------------~sv~Fspdg~llaS~s-------------------------------------------- 332 (474)
..++|+|+.+++....
T Consensus 372 ~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~ 451 (689)
T 1yiq_A 372 YWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAK 451 (689)
T ss_dssp TTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHT
T ss_pred ccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCC
Confidence 1267899888877652
Q ss_pred --CCcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecC
Q 011970 333 --NRTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 409 (474)
Q Consensus 333 --D~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~g 409 (474)
+++|..||+ +|+.+-++..+..+ +.-.++..|.+++.++. ||.|+.||..||+.|.+++.
T Consensus 452 ~~~g~l~A~D~~tG~~~W~~~~~~~~------~~g~~~tagglvf~gt~-----------dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 452 SWSGKLIAWDPVKQQAAWEVPYVTIF------NGGTLSTAGNLVFEGSA-----------DGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp TCEEEEEEEETTTTEEEEEEEESSSC------CCCEEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEEC
T ss_pred CcceeEEEEECCCCCeEeEccCCCCc------cCccceECCCEEEEECC-----------CCcEEEEECCCCccceeeeC
Confidence 278999999 59999888877643 33456778889998876 99999999999999999976
Q ss_pred CC
Q 011970 410 TN 411 (474)
Q Consensus 410 H~ 411 (474)
..
T Consensus 515 ~~ 516 (689)
T 1yiq_A 515 AS 516 (689)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=1.8e-13 Score=136.36 Aligned_cols=221 Identities=11% Similarity=0.092 Sum_probs=154.4
Q ss_pred cCceEEEEeCCCCeEEEEec--CCCcEEEeecCCCeEEEEEc---------CCcEEEEEEcCCceEEEEecCC---CCcc
Q 011970 186 KWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTMLYSIS---------DKHVQEIKISPGIMLLIFNRSS---SHVP 251 (474)
Q Consensus 186 ~~~~~V~Fs~~nGk~LaS~s--~D~tiKlWdl~tg~~l~tl~---------~~~V~~vafSpg~~la~~s~~s---~D~t 251 (474)
.+|..|+|+ ++|+++++.. .++.++||.+.+|++. .+. -..+..|+|+|++.|.+..... .+..
T Consensus 17 ~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 578899998 7999999864 2344788887677643 332 1469999999977777664220 1357
Q ss_pred EEEEecCCCeEEEEEeec------CcceeEEEEEecCCCeEEEE-e---CCCcEEEEECCCCceEEeccccCCc-eEEEE
Q 011970 252 LKILSIEDGTVLKVFYHL------LHRNKKVDFIEQFNEKLLVK-Q---ENENLQILDVRNAELMEVSRTEFMT-PSAFI 320 (474)
Q Consensus 252 IkLWdi~tG~~L~tl~~h------~~~v~~V~F~~~~~~~ll~~-~---~D~tIkIWDv~tg~~~~~l~~h~~~-v~sv~ 320 (474)
|.+||+++|++++++... ......|+|. ++++.+.++ . .++.|.+||+.+++..+++.+|... ...+.
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd-~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVD-LIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEE-TTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEe-cCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 999999999998888632 1245788886 445566554 4 6899999999999998888765322 21256
Q ss_pred EcCCCcEEEEEc-CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCC
Q 011970 321 FLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 399 (474)
Q Consensus 321 Fspdg~llaS~s-D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~ 399 (474)
|+++|+.|.+.+ |++++.|.. .++.|+|||||++|..+.. ++. +||.+.
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~------------------~~~gia~s~dg~~ly~~~~-----------~~~-~l~~~~ 223 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHL------------------GVNGIVLDAENEWLYLSPM-----------HST-SMYRIK 223 (343)
T ss_dssp CEETTEECBEECTTSCEECCCC------------------CEEEEEECTTSCEEEEEES-----------SCS-EEEEEE
T ss_pred eeECCEEEEeccCCCceeceec------------------ccceeEeccCCCEEEEEeC-----------CCC-eEEEEE
Confidence 778999888877 888877751 1578999999998887654 332 566653
Q ss_pred CCeE----------EE--EecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCC
Q 011970 400 TGKC----------LA--KINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHG 467 (474)
Q Consensus 400 tG~c----------l~--tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~Dg 467 (474)
+... .. +..++.. ....+++++||+.+++...++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g----------------------------------~pdgia~d~~G~l~va~~~~~ 269 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKP----------------------------------ICDGISIDKDHNIYVGDLAHS 269 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECC----------------------------------SCSCEEECTTCCEEEEEGGGT
T ss_pred HHHhcCCCCChhhhhcceEecccCC----------------------------------CCceEEECCCCCEEEEccCCC
Confidence 2110 00 0011111 234689999999999999999
Q ss_pred cEEEcc
Q 011970 468 LVHVWS 473 (474)
Q Consensus 468 tVklWd 473 (474)
.|.+||
T Consensus 270 ~V~~~d 275 (343)
T 2qe8_A 270 AIGVIT 275 (343)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 999997
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.51 E-value=7.4e-12 Score=122.05 Aligned_cols=225 Identities=9% Similarity=0.095 Sum_probs=156.5
Q ss_pred ccCceEEEEeCCCCe-EEEEecCCCcEEEeecCCCeE-EEEEcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeE
Q 011970 185 LKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTM-LYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV 262 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk-~LaS~s~D~tiKlWdl~tg~~-l~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~ 262 (474)
..|+....|+ |+|+ ++.++..++.|..|+. +|+. .+......+..++++|++.|+++. ..+..|.+|+.. |+.
T Consensus 44 ~~~~egp~~~-~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~--~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 44 ATWSEGPAWW-EAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCE--HGRRAITRSDAD-GQA 118 (305)
T ss_dssp CSSEEEEEEE-GGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEE--TTTTEEEEECTT-SCE
T ss_pred CcCccCCeEe-CCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEE--CCCCEEEEECCC-CCE
Confidence 5677789998 6887 7788888999999998 5553 334446779999999877777664 234679999975 775
Q ss_pred EEEEeec----CcceeEEEEEecCCCeEEE----EeC-------------CCcEEEEECCCCceEEeccccCCceEEEEE
Q 011970 263 LKVFYHL----LHRNKKVDFIEQFNEKLLV----KQE-------------NENLQILDVRNAELMEVSRTEFMTPSAFIF 321 (474)
Q Consensus 263 L~tl~~h----~~~v~~V~F~~~~~~~ll~----~~~-------------D~tIkIWDv~tg~~~~~l~~h~~~v~sv~F 321 (474)
....... ......+++. ++|..+++ +.. .+.|..+|..+++..... +...+..++|
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d-~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~ 195 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVA-RDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF 195 (305)
T ss_dssp EEEECEETTEECSCCCCEEEC-TTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE
T ss_pred EEEEeccCCCccCCCCCEEEC-CCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE
Confidence 3322211 1234668876 44544443 221 356788888888876654 5567889999
Q ss_pred cCCCcEEEEEc-C------CcEEEEeCC-CcEEE---EeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCC
Q 011970 322 LYENQLFLTFR-N------RTVAVWNFR-GELVT---SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSA 390 (474)
Q Consensus 322 spdg~llaS~s-D------~tIklWd~~-G~ll~---tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~D 390 (474)
+|||+.|..+. + +.|.+||+. +. +. .+..-.... ...+++.+||++.++. . +
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~----pdgi~~d~~G~lwv~~-~-----------~ 258 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGL----PDGFCVDRGGWLWSSS-G-----------T 258 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSC----CCSEEECTTSCEEECC-S-----------S
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCC----CCeEEECCCCCEEEec-C-----------C
Confidence 99999655544 4 789999985 33 32 222111111 3579999999977753 2 4
Q ss_pred CeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEE
Q 011970 391 GSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVH 470 (474)
Q Consensus 391 gtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVk 470 (474)
.|.+||. +|+.+.++..+. .+.+++|+||++.|+.++.++..+
T Consensus 259 -gv~~~~~-~g~~~~~~~~~~-----------------------------------~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 259 -GVCVFDS-DGQLLGHIPTPG-----------------------------------TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp -EEEEECT-TSCEEEEEECSS-----------------------------------CCCEEEECTTSCEEEEEETTEEEE
T ss_pred -cEEEECC-CCCEEEEEECCC-----------------------------------ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 4999996 799999887654 467899999999999988888776
Q ss_pred E
Q 011970 471 V 471 (474)
Q Consensus 471 l 471 (474)
+
T Consensus 302 ~ 302 (305)
T 3dr2_A 302 L 302 (305)
T ss_dssp E
T ss_pred E
Confidence 5
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=1e-11 Score=128.05 Aligned_cols=234 Identities=10% Similarity=0.066 Sum_probs=162.0
Q ss_pred ceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCC-
Q 011970 130 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS- 208 (474)
Q Consensus 130 ~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~- 208 (474)
+....|+++|+|+.+++- ..+ +.++.++...|++.. +... ...+. ++|+ ++|+.|..+..++
T Consensus 131 ~~P~~la~d~~g~lyv~d----~~~------~~I~~id~~~g~~~~---~~~~--~~~~~-ia~~-~~g~~l~~~d~~~~ 193 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQ----RDD------PRVRLISVDDNKVTT---VHPG--FKGGK-PAVT-KDKQRVYSIGWEGT 193 (409)
T ss_dssp CCEEEEEECSTTEEEEEE----TTT------TEEEEEETTTTEEEE---EEET--CCBCB-CEEC-TTSSEEEEEBSSTT
T ss_pred CCceEEEEeCCCCEEEEe----cCC------CcEEEEECCCCEEEE---eecc--CCCCc-eeEe-cCCCcEEEEecCCC
Confidence 357899999999966542 234 588889977777521 2222 33455 9998 7998888777766
Q ss_pred -cEEEeecCCCeEEEEE------cCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEE----EeecCcce-e-
Q 011970 209 -IYKVFDLKNYTMLYSI------SDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV----FYHLLHRN-K- 274 (474)
Q Consensus 209 -tiKlWdl~tg~~l~tl------~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~t----l~~h~~~v-~- 274 (474)
.|.+||..++.....+ ....+++++|+| ++.|.+.. .++.|..||.++++.... ..++.... .
T Consensus 194 ~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d---~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 194 HTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD---SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp CEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC---TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred ceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE---CCCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 7889998776655555 346788999998 78777752 257899999988874332 22232333 3
Q ss_pred EEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEecccc---------------CCceEEEEEcCCCcEEEEEc--CCcE
Q 011970 275 KVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTE---------------FMTPSAFIFLYENQLFLTFR--NRTV 336 (474)
Q Consensus 275 ~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h---------------~~~v~sv~Fspdg~llaS~s--D~tI 336 (474)
.++|. |+++.|.++ ..++.|+.||... + +.++.++ ...+..++|+|+|+++++-+ ++.|
T Consensus 271 ~ia~~-p~~g~lyv~d~~~~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I 347 (409)
T 3hrp_A 271 YLIYY-FVDSNFYMSDQNLSSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCL 347 (409)
T ss_dssp EEEEE-TTTTEEEEEETTTTEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEE
T ss_pred cEEEe-CCCCEEEEEeCCCCEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEE
Confidence 89998 445666665 5789999999654 3 3333333 46799999999999998875 7799
Q ss_pred EEEeC-CCcEEEEeccCCC---CcC-------CCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeC
Q 011970 337 AVWNF-RGELVTSFEDHLL---WHP-------DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI 398 (474)
Q Consensus 337 klWd~-~G~ll~tl~gH~~---~~~-------~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi 398 (474)
+.||. +|+ +.++.++.. +.. -..-+.|+++|||.++++-.. .+.|+-.++
T Consensus 348 ~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~-----------n~~Ir~i~~ 408 (409)
T 3hrp_A 348 RKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW-----------GKAIRKYAV 408 (409)
T ss_dssp EEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST-----------TCEEEEEEE
T ss_pred EEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC-----------CCeEEEEEe
Confidence 99996 576 566776611 000 011478999999999997654 678877654
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.50 E-value=1.7e-12 Score=134.55 Aligned_cols=289 Identities=11% Similarity=0.084 Sum_probs=187.1
Q ss_pred CceEEEEEEeeCCCEEEEEEee-cCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec--
Q 011970 129 DEVIRSLFYNKNNDSLITVSVY-ASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA-- 205 (474)
Q Consensus 129 ~~~i~sv~fspdg~~Lis~S~~-~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s-- 205 (474)
++..-.+...|||+.+-.+... ...+ .++.+-|..+++....++ .+ ..|. ++|| |||++|..++
T Consensus 32 ~~~~~~~~~~pd~~~vyV~~~~~~~~~------~~V~ViD~~t~~v~~~I~---vG--~~P~-va~s-pDG~~lyVan~~ 98 (386)
T 3sjl_D 32 DEPRILEAPAPDARRVYVNDPAHFAAV------TQQFVIDGEAGRVIGMID---GG--FLPN-PVVA-DDGSFIAHASTV 98 (386)
T ss_dssp CCCCBCCCCCCCTTEEEEEECGGGCSS------EEEEEEETTTTEEEEEEE---EC--SSCE-EEEC-TTSSCEEEEEEE
T ss_pred cccceeeccCCCCCEEEEEcCcccCCC------CEEEEEECCCCeEEEEEE---CC--CCCc-EEEC-CCCCEEEEEccc
Confidence 3433445668999987664421 0112 578888888888754322 22 2354 9998 7999775544
Q ss_pred --------CCCcEEEeecCCCeEEEEEc-C--------CcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEEEEe
Q 011970 206 --------QDSIYKVFDLKNYTMLYSIS-D--------KHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFY 267 (474)
Q Consensus 206 --------~D~tiKlWdl~tg~~l~tl~-~--------~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~ 267 (474)
.+++|.+||.++++.+.++. . ..-+.++|||+ .++.++.. ..+.+|.++|+++++.++++.
T Consensus 99 ~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~-~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 99 FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF-SPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp EEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-SSSCEEEEEETTTTEEEEEEE
T ss_pred ccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc-CCCCeEEEEECCCCcEEEEEE
Confidence 36789999999999998875 1 13456999984 45555532 235789999999999999997
Q ss_pred ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCC-CceEEeccccCC----ceE-EEEE-cCCCcEEEEEcCCcEEEEe
Q 011970 268 HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN-AELMEVSRTEFM----TPS-AFIF-LYENQLFLTFRNRTVAVWN 340 (474)
Q Consensus 268 ~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~t-g~~~~~l~~h~~----~v~-sv~F-spdg~llaS~sD~tIklWd 340 (474)
-. .. ... .|.....+++.+.||.+-..++.+ ++...+...+++ .+. ..+| .++|+++....+++|.+-|
T Consensus 178 v~--g~-~~~-~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d 253 (386)
T 3sjl_D 178 VP--DC-YHI-FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQID 253 (386)
T ss_dssp CC--SE-EEE-EEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEE
T ss_pred CC--Cc-cee-ecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEE
Confidence 31 11 112 233445666778899999999986 665432222221 111 1355 4899876655589999999
Q ss_pred CCCcE---EEEec---c---CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccc-cCCCCeEEEEeCCCCeEEEEecCC
Q 011970 341 FRGEL---VTSFE---D---HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWM-EGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 341 ~~G~l---l~tl~---g---H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~-~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
+.++. +..++ . -..|.+.- ...++++|+++.|.-.-..+. +.+ ....++|-+-|+.|++.++++.--
T Consensus 254 ~~~~~~~v~~~~~~~~~~~~~~g~~p~g-~q~~a~~~~~~~lyV~~~~~~--~~~hk~~~~~V~viD~~t~kv~~~i~vg 330 (386)
T 3sjl_D 254 LSSGDAKFLPAVEALTEAERADGWRPGG-WQQVAYHRALDRIYLLVDQRD--EWRHKTASRFVVVLDAKTGERLAKFEMG 330 (386)
T ss_dssp CTTSSCEECCCEESSCHHHHHTTEEECS-SSCEEEETTTTEEEEEEEECC--TTCTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCcceeecceeccccccccccccCCC-cceeeECCCCCeEEEEecccc--ccccCCCCCEEEEEECCCCeEEEEEECC
Confidence 96542 22222 0 01232211 245889999999887542100 000 001367999999999999998543
Q ss_pred CCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCC-EEEEEcC-CCcEEEcc
Q 011970 411 NCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN-EIYTGNR-HGLVHVWS 473 (474)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~-~LaSgs~-DgtVklWd 473 (474)
. .+++|+|||||+ +||+++. +++|.+.|
T Consensus 331 ~-----------------------------------~~~~lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 331 H-----------------------------------EIDSINVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp E-----------------------------------EECEEEECSSSSCEEEEEETTTTEEEEEE
T ss_pred C-----------------------------------CcceEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 2 688999999997 8888764 89999887
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.49 E-value=3.9e-11 Score=116.67 Aligned_cols=226 Identities=11% Similarity=0.046 Sum_probs=157.3
Q ss_pred CCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCC
Q 011970 128 PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD 207 (474)
Q Consensus 128 ~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D 207 (474)
....-.+.+|+|+++.|.-+. . .+ ..+..|+...++. ..+.. -..|..++|+ +||+++++. +
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d--~-~~------~~i~~~d~~~~~~----~~~~~--~~~~~~i~~~-~dG~l~v~~--~ 72 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVD--I-PA------KKVCRWDSFTKQV----QRVTM--DAPVSSVALR-QSGGYVATI--G 72 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEE--T-TT------TEEEEEETTTCCE----EEEEC--SSCEEEEEEB-TTSSEEEEE--T
T ss_pred CCccccCCeEECCCCEEEEEE--C-CC------CEEEEEECCCCcE----EEEeC--CCceEEEEEC-CCCCEEEEE--C
Confidence 345667889999877766543 2 23 5778888777664 22333 2457789998 799977754 5
Q ss_pred CcEEEeecCCCeEEEEEc------CCcEEEEEEcCCceEEEEecCCC-------CccEEEEecC-CCeEEEEEeecCcce
Q 011970 208 SIYKVFDLKNYTMLYSIS------DKHVQEIKISPGIMLLIFNRSSS-------HVPLKILSIE-DGTVLKVFYHLLHRN 273 (474)
Q Consensus 208 ~tiKlWdl~tg~~l~tl~------~~~V~~vafSpg~~la~~s~~s~-------D~tIkLWdi~-tG~~L~tl~~h~~~v 273 (474)
..|.+||.++++...... ...+.+++++|++.+..+..... ...-+||.+. +|+...... +....
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~-~~~~p 151 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD-QVDIS 151 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-EESBE
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee-ccccc
Confidence 679999999988543221 13588999998666655532211 1235666664 455544333 33456
Q ss_pred eEEEEEecCCCeEEEE-eCCCcEEEEEC--CCCceE-----EeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-C
Q 011970 274 KKVDFIEQFNEKLLVK-QENENLQILDV--RNAELM-----EVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-G 343 (474)
Q Consensus 274 ~~V~F~~~~~~~ll~~-~~D~tIkIWDv--~tg~~~-----~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G 343 (474)
..++|+ |++..|.+. +.++.|.+||+ .+|++. ..+..+...+..+++.++|++.++.. ++.|..||.+ |
T Consensus 152 ngi~~s-pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 152 NGLDWS-LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EEEEEC-TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred cceEEc-CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 789987 667777665 57899999997 577643 22334456789999999999999887 8899999996 9
Q ss_pred cEEEEeccCCCCcCCCCeeEEEEC-CCCCEEEEEec
Q 011970 344 ELVTSFEDHLLWHPDCNTNNIYIT-SDQDLIISYCK 378 (474)
Q Consensus 344 ~ll~tl~gH~~~~~~~~v~svafS-pDg~~LaS~s~ 378 (474)
+++.++..+... +.+++|. ||++.|...+.
T Consensus 231 ~~~~~i~~p~~~-----~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 KRLQTVKLPVDK-----TTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEECSSSB-----EEEEEEESGGGCEEEEEEB
T ss_pred eEEEEEECCCCC-----ceEEEEeCCCCCEEEEEcC
Confidence 999999877544 6899998 99987766554
No 218
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.45 E-value=4.2e-11 Score=131.62 Aligned_cols=279 Identities=13% Similarity=0.082 Sum_probs=183.8
Q ss_pred eccEEEEeeCCCeEEeeeccccceeeEeecCCC----------ceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEe
Q 011970 97 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPD----------EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (474)
Q Consensus 97 s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~----------~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw 166 (474)
.+++|+.++.++.+..+|..||+.+=....... ..-+++++ ++..|+.++ .| ..+..+
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~----~d------g~l~al 143 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGA----WD------GRLIAL 143 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEEC----TT------SEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEc----CC------CEEEEE
Confidence 478888899999999999999999876654211 11234444 455566543 33 467777
Q ss_pred EeccCCCCCccceeeeccc------cCce-EEEEeCCCCeEEEEec-----CCCcEEEeecCCCeEEEEEcC---C----
Q 011970 167 YIRRGKPDSGFALFESESL------KWPG-FVEFDDVNGKVLTYSA-----QDSIYKVFDLKNYTMLYSISD---K---- 227 (474)
Q Consensus 167 ~i~~G~~~~~~~lf~~~~~------~~~~-~V~Fs~~nGk~LaS~s-----~D~tiKlWdl~tg~~l~tl~~---~---- 227 (474)
|..+|+. +|+.... ..+. ..... +|++++.++ .|+.|..+|.+||+++.++.. .
T Consensus 144 D~~tG~~-----~W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~ 216 (677)
T 1kb0_A 144 DAATGKE-----VWHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKP 216 (677)
T ss_dssp ETTTCCE-----EEEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSC
T ss_pred ECCCCCE-----EeeecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccc
Confidence 8888986 3433210 0011 11222 677766554 279999999999999987742 1
Q ss_pred --------------------------cE-EEEEEcC-CceEEEEecCC------------CC----ccEEEEecCCCeEE
Q 011970 228 --------------------------HV-QEIKISP-GIMLLIFNRSS------------SH----VPLKILSIEDGTVL 263 (474)
Q Consensus 228 --------------------------~V-~~vafSp-g~~la~~s~~s------------~D----~tIkLWdi~tG~~L 263 (474)
.+ ..++++| ++++.+..... +| .+|.-+|.+||+.+
T Consensus 217 ~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~ 296 (677)
T 1kb0_A 217 FEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYK 296 (677)
T ss_dssp CSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE
T ss_pred ccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEE
Confidence 01 2478887 56655543221 11 25999999999999
Q ss_pred EEEeecCcc------eeEEEEE--ecCC---CeEEEEeCCCcEEEEECCCCceEEecccc-CCce---------------
Q 011970 264 KVFYHLLHR------NKKVDFI--EQFN---EKLLVKQENENLQILDVRNAELMEVSRTE-FMTP--------------- 316 (474)
Q Consensus 264 ~tl~~h~~~------v~~V~F~--~~~~---~~ll~~~~D~tIkIWDv~tg~~~~~l~~h-~~~v--------------- 316 (474)
-.++...+. .....+. +.+| ..+++++.++.|.++|.++|+++....-. ..+.
T Consensus 297 W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~ 376 (677)
T 1kb0_A 297 WHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAA 376 (677)
T ss_dssp EEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGG
T ss_pred EEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeecccc
Confidence 888732121 1111111 1244 34666789999999999999987543211 0000
Q ss_pred -------------------EEEEEcCCCcEEEEEc-C-------------------------------------------
Q 011970 317 -------------------SAFIFLYENQLFLTFR-N------------------------------------------- 333 (474)
Q Consensus 317 -------------------~sv~Fspdg~llaS~s-D------------------------------------------- 333 (474)
..++|+|+++++.... +
T Consensus 377 ~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 456 (677)
T 1kb0_A 377 RDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPF 456 (677)
T ss_dssp GCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCE
T ss_pred CcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCc
Confidence 1468899988887653 2
Q ss_pred CcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCC
Q 011970 334 RTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 411 (474)
Q Consensus 334 ~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~ 411 (474)
++|..||+ +|+.+-+++.... +++..++++|.+++.++. ||.+++||..||+++.++.-..
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~------~~~g~~~~~g~~v~~g~~-----------dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSP------WNGGTLTTAGNVVFQGTA-----------DGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSS------CCCCEEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEECSS
T ss_pred cEEEEEeCCCCcEEeecCCCCC------CcCcceEeCCCEEEEECC-----------CCcEEEEECCCCceeeeeeCCC
Confidence 78999999 5999888764432 345667888888988865 9999999999999999997544
No 219
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.43 E-value=1.3e-11 Score=118.92 Aligned_cols=289 Identities=10% Similarity=0.035 Sum_probs=200.4
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCcc
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~ 177 (474)
+..|..++.++.+..|| .+|+.+-.... +...+.+++..++|...+. .. . +..+| ++|+....+
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~~~~~~~-~~~~~~~~~~~~~g~l~v~------t~------~-l~~~d-~~g~~~~~~ 93 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSVKWFFKS-GEIIECRPSIGKDGTIYFG------SD------K-VYAIN-PDGTEKWRF 93 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCEEESSCG-GGEEEECCEETTTTEECCS------SC------E-EEEEC-CCGGGGGGS
T ss_pred CCeEEEEcCCCEEEEEC-CCCcEEEEEec-CCCcccceEEecCCcEEEe------cC------c-EEEEC-CCCcEEEEE
Confidence 56788888999999999 88998776654 4567789999888875442 22 2 44455 366642211
Q ss_pred ceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEecCCCCccEEEE
Q 011970 178 ALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKIL 255 (474)
Q Consensus 178 ~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~~la~~s~~s~D~tIkLW 255 (474)
.+-. .. .....+. +|.+. .++.++.+..+|.+ |+.+.... ...+.++.+.+++.+.++ ..++.|..+
T Consensus 94 ~~~~--~~--~~~~~~~--~~~l~-v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vg---t~~~~l~~~ 162 (330)
T 3hxj_A 94 DTKK--AI--VSDFTIF--EDILY-VTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVG---SNDNYLYAI 162 (330)
T ss_dssp CC---------CCEEEE--TTEEE-EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEE---CTTSEEEEE
T ss_pred ECCC--Cc--ccCceEE--CCEEE-EEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEE---cCCCEEEEE
Confidence 1111 11 1134443 56554 46678889999988 88776654 344667777766666665 335789999
Q ss_pred ecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEcCCc
Q 011970 256 SIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRT 335 (474)
Q Consensus 256 di~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~sD~t 335 (474)
|.+ |+.+..+......+..+.+. .++.+.++. +.|..+| .+|+.+.....+...+.++++.++|.+.+...++.
T Consensus 163 d~~-g~~~~~~~~~~~~~~~~~~d--~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~g 236 (330)
T 3hxj_A 163 NPD-GTEKWRFKTNDAITSAASIG--KDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGH 236 (330)
T ss_dssp CTT-SCEEEEEECSSCCCSCCEEC--TTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTE
T ss_pred CCC-CCEeEEEecCCCceeeeEEc--CCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCe
Confidence 998 99888887544455555542 356677776 8999999 88887765555556688888999999988777787
Q ss_pred EEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCC
Q 011970 336 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPK 415 (474)
Q Consensus 336 IklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~ 415 (474)
|..+|.+|+.+..+...... +.++++.++|.+.+. +. +|.|..+|. +|+.+..+.-...
T Consensus 237 l~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~g~l~v~-t~-----------~ggl~~~d~-~g~~~~~~~~~~~--- 295 (330)
T 3hxj_A 237 LYAINPDGTEKWRFKTGKRI-----ESSPVIGNTDTIYFG-SY-----------DGHLYAINP-DGTEKWNFETGSW--- 295 (330)
T ss_dssp EEEECTTSCEEEEEECSSCC-----CSCCEECTTSCEEEE-CT-----------TCEEEEECT-TSCEEEEEECSSC---
T ss_pred EEEECCCCCEeEEeeCCCCc-----cccceEcCCCeEEEe-cC-----------CCCEEEECC-CCcEEEEEEcCCc---
Confidence 88888889888777654432 345777788887774 32 778999995 8998877754332
Q ss_pred CccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEc
Q 011970 416 VDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVW 472 (474)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklW 472 (474)
.+.+++++++|+ |+-|+.+|.+++-
T Consensus 296 -------------------------------~~~~~~~d~~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 296 -------------------------------IIATPVIDENGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp -------------------------------CCSCCEECTTCC-EEEECTTSCEEEE
T ss_pred -------------------------------cccceEEcCCCE-EEEEcCCCeEEEE
Confidence 566788899997 5558889998764
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.43 E-value=3.7e-14 Score=143.97 Aligned_cols=188 Identities=12% Similarity=0.047 Sum_probs=108.3
Q ss_pred CCeEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcc-e-e
Q 011970 197 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR-N-K 274 (474)
Q Consensus 197 nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~-v-~ 274 (474)
+|..|+.++.|+++..||+++|+++.++....+.+..+.+++.+++. ++.|+.|..||.+||+.+..++.+... + .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~--~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLP--DPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEE--CTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEE--eCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 35577888899999999999999998876555555555555533333 246889999999999998777643211 1 1
Q ss_pred EEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeC-CCcEEEEeccC
Q 011970 275 KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF-RGELVTSFEDH 352 (474)
Q Consensus 275 ~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~-~G~ll~tl~gH 352 (474)
+..+ ..++.+++++.|++|..||.++|+++..+..+. ...++|++.+++.++ |++|..||. +|+++.+++.+
T Consensus 86 sp~~--~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 86 SPCR--SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred CceE--ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 1111 135777888899999999999999987765543 245677888888888 999999999 59987666533
Q ss_pred CCCcCCCCeeEEEECCCC---CEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 353 LLWHPDCNTNNIYITSDQ---DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 353 ~~~~~~~~v~svafSpDg---~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
.. ...++.+++ ..++.++. ||.|..||..||+.+.+.+-.
T Consensus 160 ~~-------~~~~~~~~~~~~~~v~~~~~-----------dg~v~a~d~~tG~~~W~~~~~ 202 (369)
T 2hz6_A 160 DY-------AASLPEDDVDYKMSHFVSNG-----------DGLVVTVDSESGDVLWIQNYA 202 (369)
T ss_dssp EE-------CCBCCCCCTTCCCCEEEEET-----------SCEEEEECTTTCCEEEEEECS
T ss_pred cc-------cCccccCCccccceEEEECC-----------CCEEEEEECCCCcEEEEecCC
Confidence 21 223345542 33444554 899999999999999887643
No 221
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.43 E-value=9.4e-10 Score=109.43 Aligned_cols=295 Identities=11% Similarity=0.110 Sum_probs=186.5
Q ss_pred eccEEEEeeCCCeEEeeeccccceeeEeecCC--------CceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEe
Q 011970 97 ARDIVFALAHSGVCAAFSRETNRRICFLNVSP--------DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 168 (474)
Q Consensus 97 s~~~las~s~dgtiklW~~~tg~~l~~l~g~~--------~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i 168 (474)
.++.|+.++.++.+..+|.+||+.+-...... ...+.+...- ++..|..++ .+ ..+...|.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~----~~------g~l~a~d~ 120 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGS----EK------AQVYALNT 120 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEE----TT------SEEEEEET
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEc----CC------CEEEEEEC
Confidence 47889999999999999999999886655421 1233332222 344555543 33 46777888
Q ss_pred ccCCCCCccceeeeccccC-ceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC-CcE------EEEEEcCCceE
Q 011970 169 RRGKPDSGFALFESESLKW-PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHV------QEIKISPGIML 240 (474)
Q Consensus 169 ~~G~~~~~~~lf~~~~~~~-~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~-~~V------~~vafSpg~~l 240 (474)
.+|+. +|....-.. ....... +|. |..++.|+.+..+|.++|+.+..... ..+ ....+. ++.+
T Consensus 121 ~tG~~-----~W~~~~~~~~~~~p~~~--~~~-v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v 191 (376)
T 3q7m_A 121 SDGTV-----AWQTKVAGEALSRPVVS--DGL-VLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAA 191 (376)
T ss_dssp TTCCE-----EEEEECSSCCCSCCEEE--TTE-EEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEE
T ss_pred CCCCE-----EEEEeCCCceEcCCEEE--CCE-EEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEE
Confidence 88986 344321001 1122333 564 55567899999999999999887753 222 122233 4555
Q ss_pred EEEecCCCCccEEEEecCCCeEEEEEeecCcc----------e-eEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEec
Q 011970 241 LIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR----------N-KKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS 309 (474)
Q Consensus 241 a~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~----------v-~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l 309 (474)
++. ..++.|..+|.++|+.+.++...... + ..... .++.+.+++.++.+..+|.++|+.+-..
T Consensus 192 ~~g---~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~v~~~~~~g~l~~~d~~tG~~~w~~ 265 (376)
T 3q7m_A 192 VVG---GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV---VNGVVFALAYNGNLTALDLRSGQIMWKR 265 (376)
T ss_dssp EEC---CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE---ETTEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred EEE---cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE---ECCEEEEEecCcEEEEEECCCCcEEeec
Confidence 543 34678999999999999887632110 1 11111 2678888889999999999999987543
Q ss_pred cccCCceEEEEEcCCCcEEEEEcCCcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccC
Q 011970 310 RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEG 388 (474)
Q Consensus 310 ~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s 388 (474)
.. .....++. .++.+++...++.|..+|. +|+.+-..+...... +.+..+ .+..|..++.
T Consensus 266 ~~--~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~----~~~~~~--~~~~l~v~~~---------- 326 (376)
T 3q7m_A 266 EL--GSVNDFIV-DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRL----LTSPVL--YNGNLVVGDS---------- 326 (376)
T ss_dssp CC--CCEEEEEE-ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSC----CCCCEE--ETTEEEEECT----------
T ss_pred cC--CCCCCceE-ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCc----ccCCEE--ECCEEEEEeC----------
Confidence 32 22333333 4666666655999999999 599887765222111 122222 2455555554
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEE-EEEEcCCCCEEEEEcCCC
Q 011970 389 SAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDIT-SLFYDEERNEIYTGNRHG 467 (474)
Q Consensus 389 ~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~-slafSpDg~~LaSgs~Dg 467 (474)
+|.|..+|..+|+.+..++.... .+. +... .+..|+.++.||
T Consensus 327 -~g~l~~~d~~tG~~~~~~~~~~~----------------------------------~~~~~~~~--~~~~l~v~~~~G 369 (376)
T 3q7m_A 327 -EGYLHWINVEDGRFVAQQKVDSS----------------------------------GFQTEPVA--ADGKLLIQAKDG 369 (376)
T ss_dssp -TSEEEEEETTTCCEEEEEECCTT----------------------------------CBCSCCEE--ETTEEEEEBTTS
T ss_pred -CCeEEEEECCCCcEEEEEecCCC----------------------------------cceeCCEE--ECCEEEEEeCCC
Confidence 89999999999999988765332 111 1111 256788999999
Q ss_pred cEEEcc
Q 011970 468 LVHVWS 473 (474)
Q Consensus 468 tVklWd 473 (474)
.|..|+
T Consensus 370 ~l~~~~ 375 (376)
T 3q7m_A 370 TVYSIT 375 (376)
T ss_dssp CEEEEE
T ss_pred EEEEEe
Confidence 999886
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.42 E-value=7.8e-11 Score=123.51 Aligned_cols=268 Identities=12% Similarity=0.050 Sum_probs=177.1
Q ss_pred CeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEee------cCCCccceeeeEEEEeEeccCCCCCccceee
Q 011970 108 GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVY------ASDNFSSLKCRSTKIEYIRRGKPDSGFALFE 181 (474)
Q Consensus 108 gtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~------~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~ 181 (474)
+++.+.|..|++.+.++..+. .. .++|||||+.|..+..+ |..+ ..+.+.|..+++..+.+++=.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~------~~VsviD~~t~~vv~~I~v~g 169 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRT------DYVEVFDPVTFLPIADIELPD 169 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEE------EEEEEECTTTCCEEEEEEETT
T ss_pred CeEEEEECCCCEEEEEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCC------CEEEEEECCCCcEEEEEECCC
Confidence 799999999999999998643 55 89999999988776532 1122 578889988888755433210
Q ss_pred ec---cccCceEEEEeCCCCeEEEEecC--CCcEEEeecCCCeEEEEEcCCcEEEEEEcC-C-ceEEEEecCCCCccEEE
Q 011970 182 SE---SLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSISDKHVQEIKISP-G-IMLLIFNRSSSHVPLKI 254 (474)
Q Consensus 182 ~~---~~~~~~~V~Fs~~nGk~LaS~s~--D~tiKlWdl~tg~~l~tl~~~~V~~vafSp-g-~~la~~s~~s~D~tIkL 254 (474)
.. ....|..++|| |||++|..+.. +++|-+.|+++++.+.++.-... +.+.| | ..+++. +.|+.+-+
T Consensus 170 ~~r~~~g~~P~~~~~s-pDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~---~~dG~~~~ 243 (426)
T 3c75_H 170 APRFLVGTYQWMNALT-PDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMN---CRDGSLAR 243 (426)
T ss_dssp CCCCCBSCCGGGSEEC-TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEE---ETTSSEEE
T ss_pred ccccccCCCcceEEEc-CCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEE---cCCCCEEE
Confidence 00 01346679998 79998776653 68999999999999988873222 22222 1 222222 12445555
Q ss_pred EecCCCeEEEEE----eecCcce-eEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEe-----cc----ccC---CceE
Q 011970 255 LSIEDGTVLKVF----YHLLHRN-KKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV-----SR----TEF---MTPS 317 (474)
Q Consensus 255 Wdi~tG~~L~tl----~~h~~~v-~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~-----l~----~h~---~~v~ 317 (474)
.+..+|+...+. .-....+ ..+.|. ++++.++.....++|.+.|+.++..... .. .+. ....
T Consensus 244 V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~-~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~ 322 (426)
T 3c75_H 244 VDFADGETKVTNTEVFHTEDELLINHPAFS-LRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQ 322 (426)
T ss_dssp EECCTTCCEEEECCCCSCTTSCBCSCCEEC-TTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSS
T ss_pred EECCCCcEEEEeeeeeccCCCceeeEeeec-CCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCce
Confidence 555556555321 1001111 224444 6677877777788999999876553211 00 000 1112
Q ss_pred EEEEcCCCcEEEEEc-----------CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCC-EEEEEecCCCccc
Q 011970 318 AFIFLYENQLFLTFR-----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQ 384 (474)
Q Consensus 318 sv~Fspdg~llaS~s-----------D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~-~LaS~s~~~~~~~ 384 (474)
.++|+|||+.+.... +++|.+.|.. ++.+.++.--.. .+.|+|+|||+ +|++...
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~------P~gia~spDg~~~lyv~n~------ 390 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE------IDSINVSQDAEPLLYALSA------ 390 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE------ECEEEECCSSSCEEEEEET------
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC------cCeEEEccCCCEEEEEEcC------
Confidence 368999976554442 2479999994 999998864332 37899999999 8888763
Q ss_pred cccCCCCeEEEEeCCCCeEEEEe
Q 011970 385 WMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 385 ~~~s~DgtIklWdi~tG~cl~tl 407 (474)
.+++|-++|+.|++.++++
T Consensus 391 ----~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 391 ----GTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp ----TTTEEEEEETTTCCEEEEE
T ss_pred ----CCCeEEEEECCCCCEEEEe
Confidence 3899999999999999998
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.42 E-value=3.7e-10 Score=111.74 Aligned_cols=223 Identities=11% Similarity=0.014 Sum_probs=152.5
Q ss_pred eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcE
Q 011970 131 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIY 210 (474)
Q Consensus 131 ~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~ti 210 (474)
...+.+|+|+++.|..+.. .+ ..+..|+...|+. ..+.. -..|.+++|+ ++|+++++. .+ .|
T Consensus 50 ~~egp~~~~~~~~l~~~d~---~~------~~i~~~d~~~~~~----~~~~~--~~~v~~i~~~-~dg~l~v~~-~~-gl 111 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNI---LE------RELHELHLASGRK----TVHAL--PFMGSALAKI-SDSKQLIAS-DD-GL 111 (326)
T ss_dssp BEEEEEEETTTTEEEEEEG---GG------TEEEEEETTTTEE----EEEEC--SSCEEEEEEE-ETTEEEEEE-TT-EE
T ss_pred CCcCCeEeCCCCEEEEEEC---CC------CEEEEEECCCCcE----EEEEC--CCcceEEEEe-CCCeEEEEE-CC-CE
Confidence 4567889999877765432 22 5777888776664 22332 2356789998 799988865 34 49
Q ss_pred EEeecCCCeEEEEEc------CCcEEEEEEcCCceEEEEecCC--CCccEEEEecCCCeEEEEEeecCcceeEEEEEecC
Q 011970 211 KVFDLKNYTMLYSIS------DKHVQEIKISPGIMLLIFNRSS--SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQF 282 (474)
Q Consensus 211 KlWdl~tg~~l~tl~------~~~V~~vafSpg~~la~~s~~s--~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~ 282 (474)
.+||+++|+...... ...+.+++++|++.+.++.... ......||.+.+|+...... +......++|+ ++
T Consensus 112 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~i~~s-~d 189 (326)
T 2ghs_A 112 FLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFS-PD 189 (326)
T ss_dssp EEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEEC-TT
T ss_pred EEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeC-CCcccCCeEEc-CC
Confidence 999999988643322 1358999999866666553211 11234555554677544333 23445788887 66
Q ss_pred CCeEEEE-eCCCcEEEEECC--CC-ce-----EEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCCCcEEEEeccC
Q 011970 283 NEKLLVK-QENENLQILDVR--NA-EL-----MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDH 352 (474)
Q Consensus 283 ~~~ll~~-~~D~tIkIWDv~--tg-~~-----~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~G~ll~tl~gH 352 (474)
+..+.+. ..++.|.+||+. +| ++ +..+.++...+..+++.++|+++++.. ++.|.+||.+|+.+.++..+
T Consensus 190 g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 190 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVP 269 (326)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECS
T ss_pred CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECC
Confidence 7777665 568999999986 77 42 223334456788999999999998876 78999999999999888766
Q ss_pred CCCcCCCCeeEEEEC-CCCCEEEEEec
Q 011970 353 LLWHPDCNTNNIYIT-SDQDLIISYCK 378 (474)
Q Consensus 353 ~~~~~~~~v~svafS-pDg~~LaS~s~ 378 (474)
... +.+++|+ ||++.|..++.
T Consensus 270 ~~~-----~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 270 GKQ-----TTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp CSB-----EEEEEEESTTSCEEEEEEB
T ss_pred CCC-----cEEEEEecCCCCEEEEEec
Confidence 543 6899998 99887755543
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.41 E-value=1.2e-11 Score=127.29 Aligned_cols=274 Identities=7% Similarity=-0.039 Sum_probs=175.0
Q ss_pred cEEEEeeCCC----eEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEee------cCCCccceeeeEEEEeEe
Q 011970 99 DIVFALAHSG----VCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVY------ASDNFSSLKCRSTKIEYI 168 (474)
Q Consensus 99 ~~las~s~dg----tiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~------~s~d~s~Lk~~~~~iw~i 168 (474)
...++...++ ++-+.|..|++.+.++..+. .. .++|||||+.|..+..+ |..+ .++.++|.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~------~~VsviD~ 103 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRT------DYVEVFDP 103 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEE------EEEEEECT
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCC------CEEEEEEC
Confidence 3444444454 88899999999999998755 45 79999999998876643 1233 68999999
Q ss_pred ccCCCCCccceeeec---cccCceEEEEeCCCCeEEEEecC--CCcEEE--eecCCCeEEEEEcCCcEEEEEEcC-CceE
Q 011970 169 RRGKPDSGFALFESE---SLKWPGFVEFDDVNGKVLTYSAQ--DSIYKV--FDLKNYTMLYSISDKHVQEIKISP-GIML 240 (474)
Q Consensus 169 ~~G~~~~~~~lf~~~---~~~~~~~V~Fs~~nGk~LaS~s~--D~tiKl--Wdl~tg~~l~tl~~~~V~~vafSp-g~~l 240 (474)
.+++...++++-... ....|..++|| |||++|..+.. +.++.| +|+++ +.++.-... +.+.| |...
T Consensus 104 ~T~~vv~~I~v~~~~~~~~g~~P~~ia~S-pDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~--~~~~p~g~~~ 177 (368)
T 1mda_H 104 VTFLPIADIELPDAPRFSVGPRVHIIGNC-ASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC--FHIHPGAAAT 177 (368)
T ss_dssp TTCCEEEEEEETTSCSCCBSCCTTSEEEC-TTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC--CCCEEEETTE
T ss_pred CCCCEEEEEECCCccccccCCCcceEEEc-CCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc--eEEccCCCeE
Confidence 999986654432000 01346689998 79998877653 467889 99877 455531111 11223 2222
Q ss_pred EEEecCCCCccEEEEecCC-----CeEEEE----EeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCc--eEEec
Q 011970 241 LIFNRSSSHVPLKILSIED-----GTVLKV----FYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAE--LMEVS 309 (474)
Q Consensus 241 a~~s~~s~D~tIkLWdi~t-----G~~L~t----l~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~--~~~~l 309 (474)
..+ .+.|+.+-+-|+++ |+.+.+ +.-..... . . ++++.++..+. +++.+.|+.++. .+...
T Consensus 178 ~~~--~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~-~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~ 249 (368)
T 1mda_H 178 HYL--GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-A-NYPGMLVWAVA-SSILQGDIPAAGATMKAAI 249 (368)
T ss_dssp EEC--CCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-E-TTTTEEEECBS-SCCEEEECCSSCCEEECCC
T ss_pred EEE--EcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-c-ccCCEEEEEcC-CEEEEEECCCCcceEEEEE
Confidence 222 23455665667665 544321 11001111 2 3 55777777767 999999987643 22221
Q ss_pred c-------ccCCceEE---EEEcCCCcEEEE-Ec-C-C-------cEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECC
Q 011970 310 R-------TEFMTPSA---FIFLYENQLFLT-FR-N-R-------TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS 368 (474)
Q Consensus 310 ~-------~h~~~v~s---v~Fspdg~llaS-~s-D-~-------tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSp 368 (474)
. .+...+.. ++|+|||+.+.. .. + + .+.++|+. ++.+.++.-... .+.++|+|
T Consensus 250 ~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~------p~gi~~s~ 323 (368)
T 1mda_H 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD------SDAIIAAQ 323 (368)
T ss_dssp CSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE------ECEEEECC
T ss_pred EeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC------cceEEECC
Confidence 1 11111111 689999776554 33 3 2 56699994 999998875543 47899999
Q ss_pred CCCE-EEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCC
Q 011970 369 DQDL-IISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 411 (474)
Q Consensus 369 Dg~~-LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~ 411 (474)
||++ +++.. ..+++|-++|+.|++.++++....
T Consensus 324 Dg~~l~va~~----------~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 324 DGASDNYANS----------AGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp SSSCEEEEEE----------TTTTEEEEEESSSCEEEEECCCCS
T ss_pred CCCEEEEEcc----------CCCCeEEEEECCCCcEEEEEECCC
Confidence 9984 45443 128999999999999999998766
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.41 E-value=9.2e-11 Score=114.23 Aligned_cols=233 Identities=11% Similarity=0.050 Sum_probs=156.9
Q ss_pred cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCC
Q 011970 118 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 197 (474)
Q Consensus 118 g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~n 197 (474)
+..+..|.. ........+|+|+|+.|+-+. ..+ ..+..|+. .|+. ..|.. ....+..++|+ ++
T Consensus 34 ~~~~~~l~~-~~~~~egp~~~~~g~~l~~~d---~~~------~~i~~~~~-~g~~----~~~~~-~~~~~~gl~~d-~d 96 (305)
T 3dr2_A 34 DARLLTLYD-QATWSEGPAWWEAQRTLVWSD---LVG------RRVLGWRE-DGTV----DVLLD-ATAFTNGNAVD-AQ 96 (305)
T ss_dssp TCCCEEEEC-CCSSEEEEEEEGGGTEEEEEE---TTT------TEEEEEET-TSCE----EEEEE-SCSCEEEEEEC-TT
T ss_pred CCceEEEec-CCcCccCCeEeCCCCEEEEEE---CCC------CEEEEEeC-CCCE----EEEeC-CCCccceeeEC-CC
Confidence 344445543 346678999999999665533 233 46777774 6653 23443 23457789998 79
Q ss_pred CeEEEEecCCCcEEEeecCCCeEEEEEc------CCcEEEEEEcCCceEEEEecC--C-------------CCccEEEEe
Q 011970 198 GKVLTYSAQDSIYKVFDLKNYTMLYSIS------DKHVQEIKISPGIMLLIFNRS--S-------------SHVPLKILS 256 (474)
Q Consensus 198 Gk~LaS~s~D~tiKlWdl~tg~~l~tl~------~~~V~~vafSpg~~la~~s~~--s-------------~D~tIkLWd 256 (474)
|+++++...++.|.+||.. |+...... .+.+.+++++|++.+..+.+. . ....|..+|
T Consensus 97 G~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 97 QRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred CCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEc
Confidence 9988887777899999986 66432221 134678999987666664210 0 124688888
Q ss_pred cCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCC------CcEEEEECCCCceE--Eec-cccCCceEEEEEcCCCcE
Q 011970 257 IEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN------ENLQILDVRNAELM--EVS-RTEFMTPSAFIFLYENQL 327 (474)
Q Consensus 257 i~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D------~tIkIWDv~tg~~~--~~l-~~h~~~v~sv~Fspdg~l 327 (474)
.++|+..... .......++|+ |++..|.++..+ +.|.+||+..+.+. +.+ ......+..+++.++|++
T Consensus 176 ~~~g~~~~~~--~~~~p~gl~~s-pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l 252 (305)
T 3dr2_A 176 PDGSPLQRMA--DLDHPNGLAFS-PDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL 252 (305)
T ss_dssp SSSCCCEEEE--EESSEEEEEEC-TTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE
T ss_pred CCCCcEEEEe--cCCCCcceEEc-CCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE
Confidence 8788765443 23456788986 667777776543 79999998865421 111 112345667899999998
Q ss_pred EEEEcCCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEec
Q 011970 328 FLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 328 laS~sD~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
.++..++ |.+||.+|+++..+..+.. +.+++|+||++.|..++.
T Consensus 253 wv~~~~g-v~~~~~~g~~~~~~~~~~~------~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 253 WSSSGTG-VCVFDSDGQLLGHIPTPGT------ASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EECCSSE-EEEECTTSCEEEEEECSSC------CCEEEECTTSCEEEEEET
T ss_pred EEecCCc-EEEECCCCCEEEEEECCCc------eeEEEEeCCCCEEEEEcC
Confidence 7766454 9999999999998876542 578999999988877653
No 226
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=1e-11 Score=128.74 Aligned_cols=171 Identities=15% Similarity=0.180 Sum_probs=131.9
Q ss_pred ceEEEEeCCCCeEEEEecCCCcEEEeecCCCe-------------EEEEEcCCcEEEEEEcCCceEEEEecCCCCccEEE
Q 011970 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-------------MLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKI 254 (474)
Q Consensus 188 ~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~-------------~l~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkL 254 (474)
+..++++ +.+.+|++|+.|+ ++||++++.. .+..+. . |..|+| ++..|+++ .++.|++
T Consensus 40 ~nlLais-~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp-~-V~~l~f-d~~~L~v~----~~~~l~v 110 (388)
T 1xip_A 40 LQNLDIS-NSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIP-D-VIFVCF-HGDQVLVS----TRNALYS 110 (388)
T ss_dssp CBCEEEE-TTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECT-T-EEEEEE-ETTEEEEE----ESSEEEE
T ss_pred ccEEEEc-CCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCC-C-eeEEEE-CCCEEEEE----cCCcEEE
Confidence 4468998 5777899998884 7789976433 233333 4 999999 78888776 2579999
Q ss_pred EecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEcCC
Q 011970 255 LSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNR 334 (474)
Q Consensus 255 Wdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~sD~ 334 (474)
||+.+-....++..|...+..+.+.+| .+++...||+|.+||+.++.+.. +...|++++|||+| +.+.+.||
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG-~~vg~~dg 182 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ-LAVLLKDR 182 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE-EEEEETTS
T ss_pred EEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc-eEEEEcCC
Confidence 999877666667777777888887654 38888999999999999988764 34589999999999 44433499
Q ss_pred cEEEEeCC-CcE--EEEe------c---cCCCCcCCCCeeEEEECCCCCEEEEEecCC
Q 011970 335 TVAVWNFR-GEL--VTSF------E---DHLLWHPDCNTNNIYITSDQDLIISYCKAE 380 (474)
Q Consensus 335 tIklWd~~-G~l--l~tl------~---gH~~~~~~~~v~svafSpDg~~LaS~s~~~ 380 (474)
+|++|+.+ +++ .+++ + +|... |.+|.|.++++++++|...+
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~-----V~sI~wl~~~~flv~y~~~~ 235 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYS-----PLSVTILSPQDFLAVFGNVI 235 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSE-----EEEEEESSSSEEEEEEECCC
T ss_pred cEEEEcCCCccccccceecCCcccccccCCCee-----EEEEEEecCCeEEEEEcCCC
Confidence 99999997 554 7778 4 35543 89999999999999998743
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.36 E-value=1.2e-10 Score=121.99 Aligned_cols=264 Identities=14% Similarity=0.119 Sum_probs=171.9
Q ss_pred eEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec----------CCCcEEEeecCCCeEEEEEc-C---
Q 011970 161 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QDSIYKVFDLKNYTMLYSIS-D--- 226 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s----------~D~tiKlWdl~tg~~l~tl~-~--- 226 (474)
.++.+-|..+++....++ .+ ..| .++|| |||+.|..+. .+++|-++|..+++.+.++. .
T Consensus 99 ~~VsVID~~t~~vv~~I~---vG--~~P-gia~S-pDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTD---GG--FLP-HPVAA-EDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTTTEEEEEEE---EC--SSC-EEEEC-TTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CeEEEEECCCCEEEEEEE---CC--CCC-ceEEC-CCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence 578888988888754322 22 356 89998 7999776554 46799999999999988875 2
Q ss_pred -----CcEEEEEEcCC-ceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCC-CeEEEEeCCCcEEEEE
Q 011970 227 -----KHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFN-EKLLVKQENENLQILD 299 (474)
Q Consensus 227 -----~~V~~vafSpg-~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~-~~ll~~~~D~tIkIWD 299 (474)
..-..++|||+ .++.++.. ..+.+|-+.|+++++.++++.-- .. +... |++ ..+++-+.|+++-+.|
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~-~~~~~VsVID~~t~kvv~~I~v~--g~--~~~~-p~g~~~~v~~~~dG~~~~V~ 245 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQF-SPAPAVGVVDLEGKTFDRMLDVP--DC--YHIF-PASPTVFYMNCRDGSLARVD 245 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEEC-SSSCEEEEEETTTTEEEEEEECC--SE--EEEE-EEETTEEEEEETTSSEEEEE
T ss_pred ccccCCCcceEEEcCCCCEEEEEec-CCCCeEEEEECCCCeEEEEEEcC--Cc--eeec-cCCCcEEEEEcCCCCEEEEE
Confidence 22356899985 45555532 22578999999999999998731 11 2222 333 3344457888888888
Q ss_pred CCCCceEEe----ccccCCce-EEEEEcCCCcEEEEEc-CCcEEEEeCCCcEEE---Eec---cC---CCCcCCCCeeEE
Q 011970 300 VRNAELMEV----SRTEFMTP-SAFIFLYENQLFLTFR-NRTVAVWNFRGELVT---SFE---DH---LLWHPDCNTNNI 364 (474)
Q Consensus 300 v~tg~~~~~----l~~h~~~v-~sv~Fspdg~llaS~s-D~tIklWd~~G~ll~---tl~---gH---~~~~~~~~v~sv 364 (474)
..+++...+ +.-....+ ..+.|+++++.++-.+ .++|.+-|..+.-+. +++ .. ..|.+.. ...+
T Consensus 246 ~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g-~~~v 324 (426)
T 3c75_H 246 FADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGG-WQQT 324 (426)
T ss_dssp CCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECS-SSCE
T ss_pred CCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCC-ceee
Confidence 866665422 11111111 1356899988777666 889999998643322 221 00 0111110 1348
Q ss_pred EECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccccccccccccccccc
Q 011970 365 YITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEA 444 (474)
Q Consensus 365 afSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (474)
+|+|||+.|........+.. -...+++|-+.|..|++.+++|..-.
T Consensus 325 a~s~dg~rlyVa~~~~~~gt-hk~~s~~VsVID~~T~kvv~~I~vg~--------------------------------- 370 (426)
T 3c75_H 325 AYHRQSDRIYLLVDQRDEWK-HKAASRFVVVLNAETGERINKIELGH--------------------------------- 370 (426)
T ss_dssp EEEGGGTEEEEEEEECCTTC-TTSCEEEEEEEETTTCCEEEEEEEEE---------------------------------
T ss_pred EEcCCCCEEEEEeccccccc-ccCCCCEEEEEECCCCeEEEEEECCC---------------------------------
Confidence 99999987766532000000 00014689999999999999996433
Q ss_pred ccCEEEEEEcCCCC-EEEEEc-CCCcEEEccC
Q 011970 445 LEDITSLFYDEERN-EIYTGN-RHGLVHVWSN 474 (474)
Q Consensus 445 l~~V~slafSpDg~-~LaSgs-~DgtVklWd~ 474 (474)
..++++|+|||+ .||++. .+++|-++|.
T Consensus 371 --~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 371 --EIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp --EECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred --CcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 467899999999 999999 5999999873
No 228
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.34 E-value=2.3e-11 Score=126.13 Aligned_cols=168 Identities=10% Similarity=0.034 Sum_probs=126.3
Q ss_pred CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe-----------EEEEEeecCcceeEEEEEecCCCeEEEEeCCCc
Q 011970 227 KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT-----------VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENEN 294 (474)
Q Consensus 227 ~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~-----------~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~t 294 (474)
..+..+++|+ .+.+++++. ..+++|++++.+ ..... .+.. +..|+| ++..|+++ .++.
T Consensus 38 ~~~nlLais~~~gll~a~~~----~~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f---d~~~L~v~-~~~~ 107 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASG----SKAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF---HGDQVLVS-TRNA 107 (388)
T ss_dssp SCCBCEEEETTTTEEEEEET----TEEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE---ETTEEEEE-ESSE
T ss_pred ccccEEEEcCCCCEEEEeCC----CEEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE---CCCEEEEE-cCCc
Confidence 3678899997 677776643 368889876543 11122 3445 999999 46677777 8999
Q ss_pred EEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCE
Q 011970 295 LQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 372 (474)
Q Consensus 295 IkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~ 372 (474)
|++||+.+.........|...+..+.+.+.. +|... ||+|.+||+. +++.. +... |.+++|||+|
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~-----Vs~v~WSpkG-- 174 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQN-----VTSFDVTNSQ-- 174 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEES-----EEEEEECSSE--
T ss_pred EEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCC-----ceEEEEcCCc--
Confidence 9999999877666666777788888887653 55555 9999999995 77754 2222 8999999999
Q ss_pred EEEEecCCCccccccCCCCeEEEEeCCCCeE--EEEe------c---CCCCCCCCccccCCCCCCccccccccccccccc
Q 011970 373 IISYCKAEPEDQWMEGSAGSINVSSILTGKC--LAKI------N---ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTV 441 (474)
Q Consensus 373 LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c--l~tl------~---gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (474)
++.|+. ||+|++|+..++++ .++| . +|..
T Consensus 175 ~~vg~~-----------dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~----------------------------- 214 (388)
T 1xip_A 175 LAVLLK-----------DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEY----------------------------- 214 (388)
T ss_dssp EEEEET-----------TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTS-----------------------------
T ss_pred eEEEEc-----------CCcEEEEcCCCccccccceecCCcccccccCCCe-----------------------------
Confidence 566665 99999999988887 7888 3 2443
Q ss_pred cccccCEEEEEEcCCCCEEEE
Q 011970 442 GEALEDITSLFYDEERNEIYT 462 (474)
Q Consensus 442 ~~~l~~V~slafSpDg~~LaS 462 (474)
.|.+|.|.+++++|++
T Consensus 215 -----~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 215 -----SPLSVTILSPQDFLAV 230 (388)
T ss_dssp -----EEEEEEESSSSEEEEE
T ss_pred -----eEEEEEEecCCeEEEE
Confidence 7999999999999886
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=5.9e-10 Score=122.67 Aligned_cols=238 Identities=14% Similarity=0.125 Sum_probs=157.6
Q ss_pred EEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCC----cEEEEEEcC---CceEEEEecCC---CCccEEEEecCCC
Q 011970 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK----HVQEIKISP---GIMLLIFNRSS---SHVPLKILSIEDG 260 (474)
Q Consensus 191 V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~----~V~~vafSp---g~~la~~s~~s---~D~tIkLWdi~tG 260 (474)
++.. +|+ |..++.|+.+..+|.+||+.+.+.... ....+..+| ++.+++..... .++.|.-||.+||
T Consensus 117 ~~~~--~g~-v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 117 VAVW--KGK-VYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETG 193 (689)
T ss_dssp CEEE--TTE-EEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred cEEE--CCE-EEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCC
Confidence 4553 454 555778999999999999998776431 122333344 66666553321 3678999999999
Q ss_pred eEEEEEeecC------------------------------cce-eEEEEEecCCCeEEEEeCCC----------------
Q 011970 261 TVLKVFYHLL------------------------------HRN-KKVDFIEQFNEKLLVKQENE---------------- 293 (474)
Q Consensus 261 ~~L~tl~~h~------------------------------~~v-~~V~F~~~~~~~ll~~~~D~---------------- 293 (474)
+++-++.... ..+ ..++|. +.++.+.++..++
T Consensus 194 ~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d-~~~~~vy~~~~~g~~w~~~~~~~~~gd~~ 272 (689)
T 1yiq_A 194 KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYD-PELNLLYIGVGNGSLWDPKWRSQAKGDNL 272 (689)
T ss_dssp CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEE-TTTTEEEEECCCEESSCHHHHHTTCSCCT
T ss_pred cEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEc-CCCCEEEEeCCCCCccccCCCCCCCCCce
Confidence 9998875210 011 145665 5567888876665
Q ss_pred ---cEEEEECCCCceEEeccc--cCC-------ceEEEEEcCCCc---EEEEEc-CCcEEEEeC-CCcEEEEec------
Q 011970 294 ---NLQILDVRNAELMEVSRT--EFM-------TPSAFIFLYENQ---LFLTFR-NRTVAVWNF-RGELVTSFE------ 350 (474)
Q Consensus 294 ---tIkIWDv~tg~~~~~l~~--h~~-------~v~sv~Fspdg~---llaS~s-D~tIklWd~-~G~ll~tl~------ 350 (474)
.|..||..||+.+-.... |.. .+.......+|+ .++.++ ||.+.++|. +|+++...+
T Consensus 273 y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w 352 (689)
T 1yiq_A 273 FLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSW 352 (689)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred eeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccc
Confidence 399999999998855432 321 111122234776 777887 999999999 599984322
Q ss_pred ----------------------------------cCCCCcCCCCeeEEEECCCCCEEEEEecCCC-------c-------
Q 011970 351 ----------------------------------DHLLWHPDCNTNNIYITSDQDLIISYCKAEP-------E------- 382 (474)
Q Consensus 351 ----------------------------------gH~~~~~~~~v~svafSpDg~~LaS~s~~~~-------~------- 382 (474)
|...| ..++|+|+.+++......-+ .
T Consensus 353 ~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w------~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~ 426 (689)
T 1yiq_A 353 TKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDW------QPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPF 426 (689)
T ss_dssp EEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCS------SCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSC
T ss_pred ccccCccCCCcccchhhccccCCCCeeEeCCCcccccCC------CcceECCCCCEEEEeccccceeeeecccccccccc
Confidence 11122 24899999998887643100 0
Q ss_pred -ccccc-------------------CCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccccccccccccccc
Q 011970 383 -DQWME-------------------GSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVG 442 (474)
Q Consensus 383 -~~~~~-------------------s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (474)
...-. ..+|+|..||+.||+.+.+++.+..
T Consensus 427 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~------------------------------ 476 (689)
T 1yiq_A 427 KSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI------------------------------ 476 (689)
T ss_dssp TTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS------------------------------
T ss_pred ccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC------------------------------
Confidence 00000 1258999999999999999877652
Q ss_pred ccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 443 EALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 443 ~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
+.+-.++..|..++.|+.||.|+.||
T Consensus 477 -----~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 477 -----FNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp -----CCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred -----ccCccceECCCEEEEECCCCcEEEEE
Confidence 23345677888999999999999998
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.24 E-value=1.1e-09 Score=120.39 Aligned_cols=245 Identities=12% Similarity=0.092 Sum_probs=159.5
Q ss_pred EEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCC-c---EEEEEEcC---CceEEEEecCC---CCccEEEEecCC
Q 011970 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-H---VQEIKISP---GIMLLIFNRSS---SHVPLKILSIED 259 (474)
Q Consensus 190 ~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~-~---V~~vafSp---g~~la~~s~~s---~D~tIkLWdi~t 259 (474)
.+++. +++ |..++.|+.+..+|.+||+.+.++... . ...+.-+| ++++++..... .++.|..+|.+|
T Consensus 123 ~~a~~--~~~-v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~t 199 (677)
T 1kb0_A 123 GVALW--KGK-VYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAET 199 (677)
T ss_dssp CCEEE--TTE-EEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT
T ss_pred CceEE--CCE-EEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCC
Confidence 45664 454 555678999999999999998877532 0 01111122 55665553321 268899999999
Q ss_pred CeEEEEEeecCcc-------------------------------e-eEEEEEecCCCeEEEEeCCC--------------
Q 011970 260 GTVLKVFYHLLHR-------------------------------N-KKVDFIEQFNEKLLVKQENE-------------- 293 (474)
Q Consensus 260 G~~L~tl~~h~~~-------------------------------v-~~V~F~~~~~~~ll~~~~D~-------------- 293 (474)
|+++-++...... + ..++|. +.++.+.++..++
T Consensus 200 G~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d-~~~~~vy~~~~~~~~w~~~~~~~~~gd 278 (677)
T 1kb0_A 200 GERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFD-AELNTMYVGTGNGSPWSHKVRSPKGGD 278 (677)
T ss_dssp CCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEE-TTTTEEEEECCCEESSCHHHHSTTCCC
T ss_pred CcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEc-CCCCEEEEECCCCccccCCCCCccCCC
Confidence 9999888632111 0 235655 5577777775543
Q ss_pred -----cEEEEECCCCceEEecc--ccC-------CceEEEEEcCCC---cEEEEEc-CCcEEEEeC-CCcEEEEeccC-C
Q 011970 294 -----NLQILDVRNAELMEVSR--TEF-------MTPSAFIFLYEN---QLFLTFR-NRTVAVWNF-RGELVTSFEDH-L 353 (474)
Q Consensus 294 -----tIkIWDv~tg~~~~~l~--~h~-------~~v~sv~Fspdg---~llaS~s-D~tIklWd~-~G~ll~tl~gH-~ 353 (474)
+|..+|..||+.+-... .|. ..+..+.+..|| ++++.++ +|.|.++|. +|+++..++-. .
T Consensus 279 ~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~ 358 (677)
T 1kb0_A 279 NLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPV 358 (677)
T ss_dssp CTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC
T ss_pred CeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccccc
Confidence 59999999999875432 232 223334445588 6788888 999999999 49998766421 1
Q ss_pred CCcC----CCC-e------------------------eEEEECCCCCEEEEEecCCCcc---------------------
Q 011970 354 LWHP----DCN-T------------------------NNIYITSDQDLIISYCKAEPED--------------------- 383 (474)
Q Consensus 354 ~~~~----~~~-v------------------------~svafSpDg~~LaS~s~~~~~~--------------------- 383 (474)
.|.. .|. + ..++|+|++.++...+..-+.+
T Consensus 359 ~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 438 (677)
T 1kb0_A 359 NWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGT 438 (677)
T ss_dssp SSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGG
T ss_pred CcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccc
Confidence 1100 000 0 2578999999888764310000
Q ss_pred ccc-----------cCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEE
Q 011970 384 QWM-----------EGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLF 452 (474)
Q Consensus 384 ~~~-----------~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sla 452 (474)
+.- ....++|..||+.||+.+.+++... .+++..
T Consensus 439 ~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-----------------------------------~~~~g~ 483 (677)
T 1kb0_A 439 GWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS-----------------------------------PWNGGT 483 (677)
T ss_dssp TCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS-----------------------------------SCCCCE
T ss_pred ccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC-----------------------------------CCcCcc
Confidence 000 0124899999999999998886433 344556
Q ss_pred EcCCCCEEEEEcCCCcEEEcc
Q 011970 453 YDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 453 fSpDg~~LaSgs~DgtVklWd 473 (474)
++++|..++.|+.||.+++||
T Consensus 484 ~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 484 LTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp EEETTTEEEEECTTSEEEEEE
T ss_pred eEeCCCEEEEECCCCcEEEEE
Confidence 778899999999999999997
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.21 E-value=8.9e-12 Score=126.36 Aligned_cols=224 Identities=12% Similarity=0.080 Sum_probs=123.8
Q ss_pred eeccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCC
Q 011970 96 AARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDS 175 (474)
Q Consensus 96 ~s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~ 175 (474)
..+++|++++.||.+.+||..||+.+-.+.. +.+.+..+.++|..++++ +.| ..+..||..+|+...
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~----s~d------g~l~a~d~~tG~~~w 73 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPD----PND------GSLYTLGSKNNEGLT 73 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEEC----TTT------CCEEEC-----CCSE
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEe----CCC------CEEEEEECCCCceee
Confidence 3589999999999999999999999988875 345666677788777652 455 678899988998632
Q ss_pred ccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcC-CceEEEEecCCCCccEEE
Q 011970 176 GFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKI 254 (474)
Q Consensus 176 ~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSp-g~~la~~s~~s~D~tIkL 254 (474)
..+ +....... .+..++ .+| .|..++.|+++..||+++|+++.++.... .+.++| ++.++++ +.|+.|+.
T Consensus 74 ~~~-~~~~~~~~-~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~---~~dg~v~a 144 (369)
T 2hz6_A 74 KLP-FTIPELVQ-ASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLG---RTEYTITM 144 (369)
T ss_dssp ECS-CCHHHHHT-TCSCC-------CCCCEEEEEEEEECCC------------------------EEEE---EEEEEEEC
T ss_pred eee-ccCccccc-cCceEe-cCC-EEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEE---ecCCEEEE
Confidence 111 11110110 011221 234 66778889999999999999988776432 245666 6666655 33689999
Q ss_pred EecCCCeEEEEEeecCcceeEEEEEecC---CCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEE
Q 011970 255 LSIEDGTVLKVFYHLLHRNKKVDFIEQF---NEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTF 331 (474)
Q Consensus 255 Wdi~tG~~L~tl~~h~~~v~~V~F~~~~---~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~ 331 (474)
||.++|+++.++..+. ...+.+. .+ ++.+++++.|+.|..||.++|+.+-........+..+++++||.+.+..
T Consensus 145 ~d~~tG~~~W~~~~~~--~~~~~~~-~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~ 221 (369)
T 2hz6_A 145 YDTKTRELRWNATYFD--YAASLPE-DDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMH 221 (369)
T ss_dssp CCSSSSSCCCEEEEEE--ECCBCCC-CCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECC
T ss_pred EECCCCCEEEeEeccc--ccCcccc-CCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccc
Confidence 9999999987776321 1222221 11 1678888999999999999999876654333333445667888654221
Q ss_pred ---cCCcEEEEeC-CCc
Q 011970 332 ---RNRTVAVWNF-RGE 344 (474)
Q Consensus 332 ---sD~tIklWd~-~G~ 344 (474)
.++++..+|. +|+
T Consensus 222 ~~~~~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 222 INVAVETLRYLTFMSGE 238 (369)
T ss_dssp EEEEHHHHHHHHHHHHH
T ss_pred eeecccceeeeehhcCC
Confidence 1344555555 254
No 232
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.11 E-value=1.7e-08 Score=110.68 Aligned_cols=278 Identities=12% Similarity=0.158 Sum_probs=175.3
Q ss_pred eccEEEEeeCCCeEEeeeccccceeeEeecCCCc----------eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEe
Q 011970 97 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDE----------VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (474)
Q Consensus 97 s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~----------~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw 166 (474)
.+++|+.++.++.+..+|..||+.+=........ .-+++++ ++..|+.++ .| ..+...
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~----~d------g~l~al 132 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGT----LD------GRLIAL 132 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEEC----TT------SEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEc----CC------CEEEEE
Confidence 4788899999999999999999988766532110 0123344 244555532 33 466677
Q ss_pred EeccCCCCCccceeeeccc----cC-c-eEEEEeCCCCeEEEEecC-----CCcEEEeecCCCeEEEEEcC---C-----
Q 011970 167 YIRRGKPDSGFALFESESL----KW-P-GFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISD---K----- 227 (474)
Q Consensus 167 ~i~~G~~~~~~~lf~~~~~----~~-~-~~V~Fs~~nGk~LaS~s~-----D~tiKlWdl~tg~~l~tl~~---~----- 227 (474)
|..+|+. +|..... .+ + ..... .+|++++..+. ++.|..+|++||+++.++.. .
T Consensus 133 D~~tG~~-----~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~ 205 (668)
T 1kv9_A 133 DAKTGKA-----IWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPY 205 (668)
T ss_dssp ETTTCCE-----EEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCC
T ss_pred ECCCCCE-----eeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccc
Confidence 8888886 3443110 00 0 01112 16777765442 68999999999999987741 0
Q ss_pred ------------------------cE-EEEEEcC-CceEEEEecCC------------CC----ccEEEEecCCCeEEEE
Q 011970 228 ------------------------HV-QEIKISP-GIMLLIFNRSS------------SH----VPLKILSIEDGTVLKV 265 (474)
Q Consensus 228 ------------------------~V-~~vafSp-g~~la~~s~~s------------~D----~tIkLWdi~tG~~L~t 265 (474)
.+ ..+++.| ++++.+....+ .| ..|.-+|.+||+.+-.
T Consensus 206 ~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~ 285 (668)
T 1kv9_A 206 EHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWH 285 (668)
T ss_dssp SSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE
T ss_pred cccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeE
Confidence 01 1368887 55555543211 00 1499999999999988
Q ss_pred Eee--cCcce-------eEEEEEecCCC---eEEEEeCCCcEEEEECCCCceEEeccccC-Cce----------------
Q 011970 266 FYH--LLHRN-------KKVDFIEQFNE---KLLVKQENENLQILDVRNAELMEVSRTEF-MTP---------------- 316 (474)
Q Consensus 266 l~~--h~~~v-------~~V~F~~~~~~---~ll~~~~D~tIkIWDv~tg~~~~~l~~h~-~~v---------------- 316 (474)
++. |..+. .-.++ ..++. .+++++.|+.+.++|..+|+++....-.. .+.
T Consensus 286 ~~~~~~~~wd~~~~~~~~~~d~-~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~ 364 (668)
T 1kv9_A 286 YQVTPGDSWDFTATQQITLAEL-NIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGV 364 (668)
T ss_dssp EESSTTCCSCCCCCSCEEEEEE-EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTT
T ss_pred eecCCCccccccCCCCcEEEEe-ccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccc
Confidence 873 22111 11111 12332 36667899999999999999883211100 000
Q ss_pred -------------------EEEEEcCCCcEEEE------------------------------------Ec-CCcEEEEe
Q 011970 317 -------------------SAFIFLYENQLFLT------------------------------------FR-NRTVAVWN 340 (474)
Q Consensus 317 -------------------~sv~Fspdg~llaS------------------------------------~s-D~tIklWd 340 (474)
..++|+|+..++.. .. +++|..||
T Consensus 365 ~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D 444 (668)
T 1kv9_A 365 RYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWD 444 (668)
T ss_dssp TCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEE
T ss_pred cccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEe
Confidence 02567887666442 12 48899999
Q ss_pred C-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCC
Q 011970 341 F-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 411 (474)
Q Consensus 341 ~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~ 411 (474)
. +|+.+-+.+.+..+ +...++..|.+++.++. |+.++.||..||+.+..++...
T Consensus 445 ~~tG~~~W~~~~~~~~------~~~~~~t~gg~vf~g~~-----------dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 445 PVKQKAAWKVPYPTHW------NGGTLSTAGNLVFQGTA-----------AGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp TTTTEEEEEEEESSSC------CCCEEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEECSS
T ss_pred CCCCcEEEEccCCCCC------cCceeEeCCCEEEEECC-----------cccchhhhhhcChhheEecCCC
Confidence 9 59998877655432 33445667888888865 9999999999999999987654
No 233
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.09 E-value=1.1e-06 Score=97.01 Aligned_cols=312 Identities=8% Similarity=0.043 Sum_probs=196.4
Q ss_pred EEEEEee-ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEec
Q 011970 91 VIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR 169 (474)
Q Consensus 91 V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~ 169 (474)
|.+|... +..|..+..++-+..|+.++++........+...|++++..++|...|.. .+ ..+.+++..
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-----~~------~Gl~~~~~~ 243 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT-----EG------AGLFLINPK 243 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE-----BS------SCEEEEETT
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE-----CC------CCeEEEeCC
Confidence 7788776 55566677665577888887776544332234679999999999877642 11 234455644
Q ss_pred cCCCCCccceeeec-------cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE---------cCCcEEEEE
Q 011970 170 RGKPDSGFALFESE-------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI---------SDKHVQEIK 233 (474)
Q Consensus 170 ~G~~~~~~~lf~~~-------~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl---------~~~~V~~va 233 (474)
++++. .+... ....+.++..+ ++|.+.+.. .+ -+.+||.+++++.... ....|.+|.
T Consensus 244 ~~~~~----~~~~~~~~~~~l~~~~i~~i~~d-~~g~lWigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 316 (795)
T 4a2l_A 244 TKEIK----NYLHSPSNPKSISSNYIRSLAMD-SQNRLWIGT-FN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIF 316 (795)
T ss_dssp TTEEE----EECCCTTCTTSCSCSBEEEEEEC-TTSCEEEEE-SS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEE
T ss_pred CCeEE----EeecCCCCccccCCCeEEEEEEc-CCCCEEEEe-CC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEE
Confidence 44431 11110 12346678886 688876643 44 4889998888765432 235799999
Q ss_pred EcCCceEEEEecCCCCccEEEEecCCCeEEEEEee-------cCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceE
Q 011970 234 ISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH-------LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM 306 (474)
Q Consensus 234 fSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~-------h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~ 306 (474)
..+++.|-+++. ++-|..++..+++. ..+.. ....|.++.. ..++.|-++..++-|..||..+++..
T Consensus 317 ~D~~g~lWigt~---~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~--d~~g~lWiGt~~~Gl~~~~~~~~~~~ 390 (795)
T 4a2l_A 317 MDSQGGMWLGTY---FGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVE--DKDKNLWIGTNDGGLNLYNPITQRFT 390 (795)
T ss_dssp ECTTSCEEEEES---SSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEE--CTTSCEEEEESSSCEEEECTTTCCEE
T ss_pred EeCCcCEEEEEC---CCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEE--CCCCCEEEEECCCCeEEEcCCCCcEE
Confidence 998666666642 35688888776543 22321 1234666663 34678889999988999999988776
Q ss_pred Eeccc--------cCCceEEEEEcCCCc-EEEEEcCCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEE
Q 011970 307 EVSRT--------EFMTPSAFIFLYENQ-LFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 376 (474)
Q Consensus 307 ~~l~~--------h~~~v~sv~Fspdg~-llaS~sD~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~ 376 (474)
..... ....|.++...++|+ +.+...++-|.++|.+ |+. +.+.......+...|.+++..++|++.+..
T Consensus 391 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 391 SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp EECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred EEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 54321 235789998889999 6665556778999986 554 344321100112247899999999988854
Q ss_pred ecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCC
Q 011970 377 CKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEE 456 (474)
Q Consensus 377 s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpD 456 (474)
.+-+.++|..+++....... .. +.. -....|.++..+++
T Consensus 470 -------------~~Gl~~~~~~~~~~~~~~~~-~~-~~~--------------------------~~~~~i~~i~~d~~ 508 (795)
T 4a2l_A 470 -------------LSALVRFNPEQRSFTTIEKE-KD-GTP--------------------------VVSKQITTLFRDSH 508 (795)
T ss_dssp -------------SSCEEEEETTTTEEEECCBC-TT-CCB--------------------------CCCCCEEEEEECTT
T ss_pred -------------cCceeEEeCCCCeEEEcccc-cc-ccc--------------------------cCCceEEEEEECCC
Confidence 23488899888876432211 00 000 00027999999999
Q ss_pred CCEEEEEcCCCcE
Q 011970 457 RNEIYTGNRHGLV 469 (474)
Q Consensus 457 g~~LaSgs~DgtV 469 (474)
|+..+... +|..
T Consensus 509 g~lWigt~-~Gl~ 520 (795)
T 4a2l_A 509 KRLWIGGE-EGLS 520 (795)
T ss_dssp CCEEEEES-SCEE
T ss_pred CCEEEEeC-CceE
Confidence 99877665 5643
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.09 E-value=7.3e-07 Score=84.67 Aligned_cols=205 Identities=11% Similarity=0.020 Sum_probs=136.3
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 261 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~--~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~ 261 (474)
...|..++|++.++.+.++...++.|.++|+.++.....+.. .....++++| ++.|..+.. ....|.++++. |+
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~--~~~~I~~~~~~-g~ 111 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS--QLDRIEVAKMD-GT 111 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET--TTTEEEEEETT-SC
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC--CCCEEEEEEcC-CC
Confidence 345678999854677888888889999999976654444432 4788999997 677776643 35689999975 44
Q ss_pred EEEEEe-ecCcceeEEEEEecCCCeEEEEeC---CCcEEEEECCCCceEEeccccCCceEEEEEcCCC-cEEEEEc-CCc
Q 011970 262 VLKVFY-HLLHRNKKVDFIEQFNEKLLVKQE---NENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN-QLFLTFR-NRT 335 (474)
Q Consensus 262 ~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~~---D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg-~llaS~s-D~t 335 (474)
..+.+. .....-..+++. +++++|..+.. .+.|..+++...............+..++++|++ .++++-. .++
T Consensus 112 ~~~~~~~~~~~~P~~i~vd-~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 112 QRRVLFDTGLVNPRGIVTD-PVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp SCEEEECSSCSSEEEEEEE-TTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CEEEEEECCCCCccEEEEe-eCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 333332 222445788886 55677777643 4788888876433222223445679999999975 5666666 889
Q ss_pred EEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 336 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 336 IklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
|.+.|.+|..+..+-.. ... -..+++ |+..|.-+.. ..+.|...|..+|+.++++...
T Consensus 191 I~~~~~~g~~~~~~~~~-~~~----P~gi~~--d~~~lyva~~----------~~~~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEG-LQY----PFAVTS--YGKNLYYTDW----------KTNSVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp EEEEETTEEEEEEEEEC-CCS----EEEEEE--ETTEEEEEET----------TTTEEEEEETTTTEEEEEECCS
T ss_pred EEEEecCCCceEEEecC-CCC----ceEEEE--eCCEEEEEEC----------CCCeEEEEeCCCCCceEEEccc
Confidence 99999986544333221 122 246665 4444444432 2689999999999999999643
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.09 E-value=1.2e-09 Score=112.30 Aligned_cols=255 Identities=9% Similarity=0.056 Sum_probs=155.8
Q ss_pred EEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec----------CCCcEEEeecCCCeEEEEEc-C----
Q 011970 162 STKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QDSIYKVFDLKNYTMLYSIS-D---- 226 (474)
Q Consensus 162 ~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s----------~D~tiKlWdl~tg~~l~tl~-~---- 226 (474)
++.+.|..+++.... +..+ ..| .++|| |||+.|..+. .|++|.+||+.+++.+.++. .
T Consensus 47 ~vsvID~~t~~v~~~---i~vG--~~P-~i~~s-pDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLGH---SLGA--FLS-LAVAG-HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEEEEE---EEEC--TTC-EEEEC-TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCCeEEEE---EeCC--CCC-ceEEC-CCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 566677777776443 2222 235 79998 7998877665 37899999999999999885 2
Q ss_pred ----CcEEEEEEcC-CceEEEEecCCCCccEEE--EecCCCeEEEEEeecCcceeEEEEEecCCCeEEE-EeCCCcEEEE
Q 011970 227 ----KHVQEIKISP-GIMLLIFNRSSSHVPLKI--LSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV-KQENENLQIL 298 (474)
Q Consensus 227 ----~~V~~vafSp-g~~la~~s~~s~D~tIkL--Wdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~-~~~D~tIkIW 298 (474)
..-..++||| |.+++++.. +.+..|.+ +|+++ ++++.- ... +.+. |+++...+ .+.|+.+-+-
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~-~~~~~v~V~~iD~~t---v~~i~v--~~~--~~~~-p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLF-GSSAAAGLSVPGASD---DQLTKS--ASC--FHIH-PGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEEC-SSSCEEEEEETTTEE---EEEEEC--SSC--CCCE-EEETTEEECCCCTTSCEEE
T ss_pred cccCCCcceEEEcCCCCEEEEEcc-CCCCeEEEEEEchhh---ceEEEC--CCc--eEEc-cCCCeEEEEEcCCCCEEEE
Confidence 2355799998 556666543 22345777 99977 566541 111 1122 33444433 4688888888
Q ss_pred ECCC-----CceEEe----ccccCCceEEEEEcCCCcEEEEEcCCcEEEEeCCC---cEEEEecc------CCCCcCCCC
Q 011970 299 DVRN-----AELMEV----SRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG---ELVTSFED------HLLWHPDCN 360 (474)
Q Consensus 299 Dv~t-----g~~~~~----l~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~G---~ll~tl~g------H~~~~~~~~ 360 (474)
|+.+ ++.+.+ ..-.. .+. ++.+++.++.... ++|.+-|+.+ +.+.++.- ...|.+..
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~-~P~--~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g- 265 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSS-QAA--QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG- 265 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCS-CCE--EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS-
T ss_pred ECccccccCCeEEEEeeeeeeCCC-Ccc--ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc-
Confidence 9887 543311 11111 222 3556666666556 8888889853 23333311 11222110
Q ss_pred eeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccccccccccccc
Q 011970 361 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRST 440 (474)
Q Consensus 361 v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (474)
...++|+|||+.+.-+....+.... +..++ +.++|+.|++.+++|....
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~-~~~~~-~~ViD~~t~~vv~~i~vg~----------------------------- 314 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCL-AAAEN-TSSVTASVGQTSGPISNGH----------------------------- 314 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTT-SCEEE-EEEEESSSCCEEECCEEEE-----------------------------
T ss_pred ceeeEEcCCCCEEEEEeccccCccc-ccCCC-EEEEECCCCeEEEEEECCC-----------------------------
Confidence 1228899999988754210000000 00133 4499999999999997654
Q ss_pred ccccccCEEEEEEcCCCCE-EEEEc-CCCcEEEccC
Q 011970 441 VGEALEDITSLFYDEERNE-IYTGN-RHGLVHVWSN 474 (474)
Q Consensus 441 ~~~~l~~V~slafSpDg~~-LaSgs-~DgtVklWd~ 474 (474)
..+.++|+|||+. +++.. .+++|.++|.
T Consensus 315 ------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 315 ------DSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp ------EECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred ------CcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 5678999999984 56666 5999999983
No 236
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.05 E-value=8.1e-08 Score=95.40 Aligned_cols=257 Identities=9% Similarity=0.080 Sum_probs=159.6
Q ss_pred EEeeccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCC
Q 011970 94 IVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKP 173 (474)
Q Consensus 94 i~~s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~ 173 (474)
++..++.|+.++.++.+..+|.+||+.+-.... +.....+... .+| .|+.+ +.+ ..+...|..+|+.
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~-~~~~~~~p~~-~~~-~v~v~----~~~------g~l~~~d~~tG~~ 165 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV-AGEALSRPVV-SDG-LVLIH----TSN------GQLQALNEADGAV 165 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC-SSCCCSCCEE-ETT-EEEEE----CTT------SEEEEEETTTCCE
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC-CCceEcCCEE-ECC-EEEEE----cCC------CeEEEEECCCCcE
Confidence 444588899999999999999999998876664 2222222222 244 45443 234 4677788888886
Q ss_pred CCccceeeeccccCc------eEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCCc---------EEEEEEcC--
Q 011970 174 DSGFALFESESLKWP------GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKH---------VQEIKISP-- 236 (474)
Q Consensus 174 ~~~~~lf~~~~~~~~------~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~---------V~~vafSp-- 236 (474)
+|.......+ ...... +|. |..++.++.+..+|+++|+.+....... +..+.-+|
T Consensus 166 -----~W~~~~~~~~~~~~~~~~~~~~--~~~-v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (376)
T 3q7m_A 166 -----KWTVNLDMPSLSLRGESAPTTA--FGA-AVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV 237 (376)
T ss_dssp -----EEEEECCC-----CCCCCCEEE--TTE-EEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE
T ss_pred -----EEEEeCCCCceeecCCCCcEEE--CCE-EEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE
Confidence 3433110000 123333 454 5557789999999999999987765210 11111223
Q ss_pred -CceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecc-ccCC
Q 011970 237 -GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR-TEFM 314 (474)
Q Consensus 237 -g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~-~h~~ 314 (474)
++.+.+. +.++.|..+|.++|+.+..... .....+. .+++.+.++..++.|..+|..+|+.+-... ....
T Consensus 238 ~~~~v~~~---~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~---~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~ 309 (376)
T 3q7m_A 238 VNGVVFAL---AYNGNLTALDLRSGQIMWKREL--GSVNDFI---VDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR 309 (376)
T ss_dssp ETTEEEEE---CTTSCEEEEETTTCCEEEEECC--CCEEEEE---EETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS
T ss_pred ECCEEEEE---ecCcEEEEEECCCCcEEeeccC--CCCCCce---EECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC
Confidence 5566555 3367899999999999877662 2233333 237889999999999999999999875433 1222
Q ss_pred ceEEEEEcCCCcEEEEEcCCcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeE
Q 011970 315 TPSAFIFLYENQLFLTFRNRTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSI 393 (474)
Q Consensus 315 ~v~sv~Fspdg~llaS~sD~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtI 393 (474)
.+.+.+. .++.+++...++.|.++|. +|+++..++-....+. ....+ .+|.+++ ++. ||.|
T Consensus 310 ~~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~----~~~~~-~~~~l~v-~~~-----------~G~l 371 (376)
T 3q7m_A 310 LLTSPVL-YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQ----TEPVA-ADGKLLI-QAK-----------DGTV 371 (376)
T ss_dssp CCCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBC----SCCEE-ETTEEEE-EBT-----------TSCE
T ss_pred cccCCEE-ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcce----eCCEE-ECCEEEE-EeC-----------CCEE
Confidence 2222222 3566555545999999998 5999887765333211 11222 2555444 444 8888
Q ss_pred EEEe
Q 011970 394 NVSS 397 (474)
Q Consensus 394 klWd 397 (474)
..+|
T Consensus 372 ~~~~ 375 (376)
T 3q7m_A 372 YSIT 375 (376)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8886
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.03 E-value=7.4e-08 Score=95.04 Aligned_cols=215 Identities=13% Similarity=0.086 Sum_probs=138.7
Q ss_pred CeEEEEEc-C--CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecC-cceeEEEEEecCCCeEEEEe-CC
Q 011970 218 YTMLYSIS-D--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLL-HRNKKVDFIEQFNEKLLVKQ-EN 292 (474)
Q Consensus 218 g~~l~tl~-~--~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~-~~v~~V~F~~~~~~~ll~~~-~D 292 (474)
++.+.+++ + ...+.++|+|++.|..++....+..|...|++||+.++++.-.. .....+++ ++++|.+.. .+
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~---~g~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL---LNEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE---ETTEEEEEETTC
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE---eCCEEEEEEecC
Confidence 45566665 2 35789999986677766432335789999999999999986211 12234454 366777765 78
Q ss_pred CcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCC
Q 011970 293 ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ 370 (474)
Q Consensus 293 ~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg 370 (474)
+++-++|..+++.+.++....... ..++|||+.|..+. +++|.+.|.. .+.+.++.--....+-...|.+.|. ||
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg 162 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG 162 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC
Confidence 999999999999988764221222 33566777666666 8899999995 7877776622110000125788888 88
Q ss_pred CEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEE
Q 011970 371 DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITS 450 (474)
Q Consensus 371 ~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~s 450 (474)
++.+.... +++|-+-|..||+.++++.-....+. + .............
T Consensus 163 ~lyvn~~~-----------~~~V~vID~~tg~V~~~I~~~g~~~~---~------------------~~~~~~~~~v~nG 210 (266)
T 2iwa_A 163 EVWANIWQ-----------TDCIARISAKDGTLLGWILLPNLRKK---L------------------IDEGFRDIDVLNG 210 (266)
T ss_dssp EEEEEETT-----------SSEEEEEETTTCCEEEEEECHHHHHH---H------------------HHTTCTTCCCEEE
T ss_pred EEEEecCC-----------CCeEEEEECCCCcEEEEEECCCcccc---c------------------ccccccccCceEE
Confidence 76665433 78999999999999999963210000 0 0000000125689
Q ss_pred EEEcCCCCEEE-EEcCCCcEE
Q 011970 451 LFYDEERNEIY-TGNRHGLVH 470 (474)
Q Consensus 451 lafSpDg~~La-Sgs~DgtVk 470 (474)
++|+|||+.|+ ++...++|.
T Consensus 211 Ia~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 211 IAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp EEEETTTTEEEEEETTCSEEE
T ss_pred EEEcCCCCEEEEECCCCCeEE
Confidence 99999998755 555566554
No 238
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.03 E-value=3.4e-06 Score=93.04 Aligned_cols=309 Identities=10% Similarity=0.078 Sum_probs=197.2
Q ss_pred cccEEEEEee-ccEEEEeeCCCeEEeeeccccceeeEeec------CCCceEEEEEEeeCCCEEEEEEeecCCCccceee
Q 011970 88 RTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNV------SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKC 160 (474)
Q Consensus 88 ~~~V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g------~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~ 160 (474)
...|.+|... ...|..|+.+| +.+|+..+++....... -..+.|++++..++|..-+. +.+
T Consensus 262 ~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWig-----t~~------ 329 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWIGTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLG-----TYF------ 329 (795)
T ss_dssp CSBEEEEEECTTSCEEEEESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEE-----ESS------
T ss_pred CCeEEEEEEcCCCCEEEEeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEE-----ECC------
Confidence 3568888887 44556666665 67889887765544321 12367999999999996553 232
Q ss_pred eEEEEeEeccCCCCCccceeee-----c-cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEE----------E
Q 011970 161 RSTKIEYIRRGKPDSGFALFES-----E-SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS----------I 224 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~-----~-~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~t----------l 224 (474)
..+..++...+++ ..+.. . .-..|.++..+ ++|.+.+ |+.++-+..||.++++..+- +
T Consensus 330 ~Gl~~~~~~~~~~----~~~~~~~~~~~l~~~~V~~i~~d-~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l 403 (795)
T 4a2l_A 330 GGLNYYHPIRNRF----KNIRNIPYKNSLSDNVVSCIVED-KDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGI 403 (795)
T ss_dssp SCEEEECGGGGSS----EEECCCTTSSSCSCSSEEEEEEC-TTSCEEE-EESSSCEEEECTTTCCEEEECCC------CC
T ss_pred CCeEEeCCCcccc----eEEcCCCCCCCCCCCeeEEEEEC-CCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCC
Confidence 3444555444443 11111 0 12346678886 6888766 56666688999888775432 2
Q ss_pred cCCcEEEEEEcCCce-EEEEecCCCCccEEEEecCCCeEEEEEee-----cCcceeEEEEEecCCCeEEEEeCCCcEEEE
Q 011970 225 SDKHVQEIKISPGIM-LLIFNRSSSHVPLKILSIEDGTVLKVFYH-----LLHRNKKVDFIEQFNEKLLVKQENENLQIL 298 (474)
Q Consensus 225 ~~~~V~~vafSpg~~-la~~s~~s~D~tIkLWdi~tG~~L~tl~~-----h~~~v~~V~F~~~~~~~ll~~~~D~tIkIW 298 (474)
..+.|.++...+++. |.+++. ++-|.++|.++|+... +.. ....|.++.. ..++.|.++.. +-|.+|
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~---~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~--d~~g~lwigt~-~Gl~~~ 476 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTH---AGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILP--DGEGNLWLGTL-SALVRF 476 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEET---TTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEE--CSSSCEEEEES-SCEEEE
T ss_pred CCccEEEEEEcCCCCEEEEEeC---cCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEE--CCCCCEEEEec-CceeEE
Confidence 346799999986555 666532 3569999999887543 321 2345677664 33567777766 568899
Q ss_pred ECCCCceEEeccc------cCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEEEecc--CCCCcCCCCeeEEEECCC
Q 011970 299 DVRNAELMEVSRT------EFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFED--HLLWHPDCNTNNIYITSD 369 (474)
Q Consensus 299 Dv~tg~~~~~l~~------h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~tl~g--H~~~~~~~~v~svafSpD 369 (474)
|..+++....... ....|.++...++|++.+... +-+..||.. ++. .+.. .....++..|.+|+..++
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~ 553 (795)
T 4a2l_A 477 NPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASN 553 (795)
T ss_dssp ETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTT
T ss_pred eCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCC
Confidence 9998877654321 236789999999999988776 557788985 554 4431 001112224789999999
Q ss_pred CCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEE
Q 011970 370 QDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDIT 449 (474)
Q Consensus 370 g~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~ 449 (474)
|++.++. .+-|..||..+++.. .+......|. ..|.
T Consensus 554 g~lWigT-------------~~Gl~~~d~~~~~~~-~~~~~~gl~~------------------------------~~i~ 589 (795)
T 4a2l_A 554 GIIWVGT-------------REGFYCFNEKDKQIK-RYNTTNGLPN------------------------------NVVY 589 (795)
T ss_dssp SCEEEEE-------------SSCEEEEETTTTEEE-EECGGGTCSC------------------------------SCEE
T ss_pred CCEEEEe-------------CCCceeECCCCCcEE-EeCCCCCCch------------------------------hheE
Confidence 9988864 235788998777654 3432221111 1688
Q ss_pred EEEEcCCCCEEEEEcCCCcE
Q 011970 450 SLFYDEERNEIYTGNRHGLV 469 (474)
Q Consensus 450 slafSpDg~~LaSgs~DgtV 469 (474)
++..+++|+..+++. .|.+
T Consensus 590 ~i~~d~~g~lWi~t~-~Gl~ 608 (795)
T 4a2l_A 590 GILEDSFGRLWLSTN-RGIS 608 (795)
T ss_dssp EEEECTTSCEEEEET-TEEE
T ss_pred EEEECCCCCEEEEcC-CceE
Confidence 999999998877763 4543
No 239
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.02 E-value=3.6e-07 Score=89.17 Aligned_cols=223 Identities=9% Similarity=0.059 Sum_probs=142.4
Q ss_pred cCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEE
Q 011970 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK 264 (474)
Q Consensus 186 ~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~ 264 (474)
.++..++++ ++|+++++...++.|..||..+ +....+. ......|+|+|++.|.++........|..+|..+|+...
T Consensus 32 ~~pegia~~-~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASA-PDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEEC-TTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 567789998 6999988888889999999765 4443333 457889999986666665432111235566778888643
Q ss_pred EEee-cCcceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCce-EE---------eccccCCceEEEEEcCCCc-EEEEE
Q 011970 265 VFYH-LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAEL-ME---------VSRTEFMTPSAFIFLYENQ-LFLTF 331 (474)
Q Consensus 265 tl~~-h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~tg~~-~~---------~l~~h~~~v~sv~Fspdg~-llaS~ 331 (474)
.... .......+++. .++.+++.. .++.|..+|..+++. +. ...+....+..+ +||++ ++++-
T Consensus 110 ~~~~~~~~~~~g~~~~--~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPL--SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEECTTCSCEEEEEES--SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEeCCCccccCccccc--CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 3321 11223444432 245666654 688999999876532 11 111233456666 88875 55666
Q ss_pred c-CCcEEEEeCC--CcE--EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEE-
Q 011970 332 R-NRTVAVWNFR--GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLA- 405 (474)
Q Consensus 332 s-D~tIklWd~~--G~l--l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~- 405 (474)
+ .++|..++++ |++ ...+..... -..+++.|||++.++... .+.|.++|. .|+...
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~~~~------P~gi~vd~dG~l~va~~~-----------~~~V~~~~~-~G~~~~~ 247 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVEQTN------IDDFAFDVEGNLYGATHI-----------YNSVVRIAP-DRSTTII 247 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEESCC------CSSEEEBTTCCEEEECBT-----------TCCEEEECT-TCCEEEE
T ss_pred CCCCEEEEEEeCCCCCCCccEEEeccCC------CCCeEECCCCCEEEEeCC-----------CCeEEEECC-CCCEEEE
Confidence 6 8899999985 442 222221111 257999999998887543 678999995 587643
Q ss_pred -EecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEc---CCCCEEEEEcCC
Q 011970 406 -KINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD---EERNEIYTGNRH 466 (474)
Q Consensus 406 -tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafS---pDg~~LaSgs~D 466 (474)
.+... +...++++|. ||+++|+-++..
T Consensus 248 ~~~~~~----------------------------------~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 248 AQAEQG----------------------------------VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ECGGGT----------------------------------CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred eecccc----------------------------------cCCceEEEEecccCCCCEEEEECCC
Confidence 22211 1268899999 999888866543
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.00 E-value=3.1e-08 Score=95.26 Aligned_cols=259 Identities=10% Similarity=0.023 Sum_probs=167.5
Q ss_pred cEEEEEee-ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEe
Q 011970 90 KVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 168 (474)
Q Consensus 90 ~V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i 168 (474)
.+..+... +..|..++.+ +..+|. +|+.+..+.. +.....+.++. +|. |..+ +.+ ..+..++.
T Consensus 61 ~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~-~~~~~~~~~~~-~~~-l~v~----t~~------~~l~~~d~ 124 (330)
T 3hxj_A 61 IECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDT-KKAIVSDFTIF-EDI-LYVT----SMD------GHLYAINT 124 (330)
T ss_dssp EEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC------CCEEEE-TTE-EEEE----CTT------SEEEEECT
T ss_pred cccceEEecCCcEEEecCc--EEEECC-CCcEEEEEEC-CCCcccCceEE-CCE-EEEE----ecC------CEEEEEcC
Confidence 34555665 5667777766 777885 6877655443 22333344444 554 4432 233 35555664
Q ss_pred ccCCCCCccceeeec-cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEec
Q 011970 169 RRGKPDSGFALFESE-SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNR 245 (474)
Q Consensus 169 ~~G~~~~~~~lf~~~-~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSpg~~la~~s~ 245 (474)
. |+. ++... ....+..+.++ ++|.+++ ++.++.+..+|.+ |+.+..+. ...+.++.+.+++.+.+++
T Consensus 125 ~-g~~-----~~~~~~~~~~~~~~~~~-~~g~l~v-gt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t- 194 (330)
T 3hxj_A 125 D-GTE-----KWRFKTKKAIYATPIVS-EDGTIYV-GSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS- 194 (330)
T ss_dssp T-SCE-----EEEEECSSCCCSCCEEC-TTSCEEE-ECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES-
T ss_pred C-CCE-----EEEEcCCCceeeeeEEc-CCCEEEE-EcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe-
Confidence 5 664 23321 11122345665 5887555 6678999999998 88776554 4567778887666666653
Q ss_pred CCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCC
Q 011970 246 SSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN 325 (474)
Q Consensus 246 ~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg 325 (474)
+.|..+| .+|+.+..+......+.++.+. .++.+.++..++.|..+| .+++.+.........+.++++.++|
T Consensus 195 ----~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~--~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g 266 (330)
T 3hxj_A 195 ----DKVYAIN-PDGTEKWNFYAGYWTVTRPAIS--EDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTD 266 (330)
T ss_dssp ----SSEEEEC-TTSCEEEEECCSSCCCSCCEEC--TTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTS
T ss_pred ----CEEEEEC-CCCcEEEEEccCCcceeceEEC--CCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCC
Confidence 5799999 8999888777544556666653 246888888888898888 4666655444444445556677789
Q ss_pred cEEEEEcCCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCC
Q 011970 326 QLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 399 (474)
Q Consensus 326 ~llaS~sD~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~ 399 (474)
++.+...++.|..+|.+|+.+..+.-... .+.++++.++|++.+.. .+|.+++-...
T Consensus 267 ~l~v~t~~ggl~~~d~~g~~~~~~~~~~~-----~~~~~~~d~~g~l~~gt------------~~G~~~~~~~~ 323 (330)
T 3hxj_A 267 TIYFGSYDGHLYAINPDGTEKWNFETGSW-----IIATPVIDENGTIYFGT------------RNGKFYALFNL 323 (330)
T ss_dssp CEEEECTTCEEEEECTTSCEEEEEECSSC-----CCSCCEECTTCCEEEEC------------TTSCEEEEEC-
T ss_pred eEEEecCCCCEEEECCCCcEEEEEEcCCc-----cccceEEcCCCEEEEEc------------CCCeEEEEecc
Confidence 88877668889999988998877764333 25788888999988843 38999887653
No 241
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.97 E-value=3.4e-07 Score=98.61 Aligned_cols=279 Identities=13% Similarity=0.073 Sum_probs=170.6
Q ss_pred eccEEEEeeC-CCeEEeeec-cccceeeEeecCCCc----------eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEE
Q 011970 97 ARDIVFALAH-SGVCAAFSR-ETNRRICFLNVSPDE----------VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (474)
Q Consensus 97 s~~~las~s~-dgtiklW~~-~tg~~l~~l~g~~~~----------~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~ 164 (474)
.+++|+.++. ++.+..+|. .||+.+=........ .-+++++ ++..|+.++ .| ..+.
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~----~d------g~l~ 128 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQ----AN------GHLL 128 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC----TT------SEEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEe----CC------CEEE
Confidence 3778888888 899999999 899988665432211 1123343 345555432 33 4566
Q ss_pred EeEeccCCCCCccceeeeccc----cC-ce-EEEEeCCCCeEEEEecC-----CCcEEEeecCCCeEEEEEcCC-c----
Q 011970 165 IEYIRRGKPDSGFALFESESL----KW-PG-FVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISDK-H---- 228 (474)
Q Consensus 165 iw~i~~G~~~~~~~lf~~~~~----~~-~~-~V~Fs~~nGk~LaS~s~-----D~tiKlWdl~tg~~l~tl~~~-~---- 228 (474)
..|..+|+. +|+.... .+ +. ..... +|++++.++. |+.|..+|.+||+.+.++... .
T Consensus 129 alD~~tG~~-----~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~ 201 (571)
T 2ad6_A 129 ALDAKTGKI-----NWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSV 201 (571)
T ss_dssp EEETTTCCE-----EEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHH
T ss_pred EEECCCCCE-----EEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCcccc
Confidence 677788886 3432100 00 00 11122 6777776553 899999999999999877521 1
Q ss_pred ----------------------------------E-EEEEEcC-CceEEEEecCC---------CC----ccEEEEecCC
Q 011970 229 ----------------------------------V-QEIKISP-GIMLLIFNRSS---------SH----VPLKILSIED 259 (474)
Q Consensus 229 ----------------------------------V-~~vafSp-g~~la~~s~~s---------~D----~tIkLWdi~t 259 (474)
+ ..+++.| .+++....... .| ..|.-+|.+|
T Consensus 202 ~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~t 281 (571)
T 2ad6_A 202 RLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDT 281 (571)
T ss_dssp TBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTT
T ss_pred ccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCC
Confidence 1 1256665 44554443210 12 2599999999
Q ss_pred CeEEEEEeecCc------ceeEEEEEe--cCCC--e-EEEEeCCCcEEEEECCCCceEEecc-cc-C----------Cce
Q 011970 260 GTVLKVFYHLLH------RNKKVDFIE--QFNE--K-LLVKQENENLQILDVRNAELMEVSR-TE-F----------MTP 316 (474)
Q Consensus 260 G~~L~tl~~h~~------~v~~V~F~~--~~~~--~-ll~~~~D~tIkIWDv~tg~~~~~l~-~h-~----------~~v 316 (474)
|+.+-.++...+ ...+..+.. .++. + ++.++.++.+.++|.++|+.+-... ++ . ..+
T Consensus 282 G~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p 361 (571)
T 2ad6_A 282 GMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTP 361 (571)
T ss_dssp CCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSE
T ss_pred CcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCce
Confidence 999988873211 111222221 2342 3 4457789999999999999875422 11 0 011
Q ss_pred ---------------------------EEEEEcCCCcEEEEEc-------------------------------------
Q 011970 317 ---------------------------SAFIFLYENQLFLTFR------------------------------------- 332 (474)
Q Consensus 317 ---------------------------~sv~Fspdg~llaS~s------------------------------------- 332 (474)
..++|+|++.+|....
T Consensus 362 ~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~ 441 (571)
T 2ad6_A 362 VRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKK 441 (571)
T ss_dssp EECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSC
T ss_pred ecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCC
Confidence 2357888876665542
Q ss_pred -CCcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 333 -NRTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 333 -D~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
++.|..||. +|+.+-+++..... .+..+...+.++..++. |+.|..+|..||+++.+++..
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~------~~~~~~t~gg~v~~g~~-----------dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAA------WGGTLYTKGGLVWYATL-----------DGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCC------CSBCEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEECCCCCEEEEecCCCCc------cceeEEECCCEEEEEcC-----------CCeEEEEECCCCCEEEEEeCC
Confidence 478999999 59998877643321 22333334556666665 999999999999999998754
Q ss_pred C
Q 011970 411 N 411 (474)
Q Consensus 411 ~ 411 (474)
.
T Consensus 505 ~ 505 (571)
T 2ad6_A 505 S 505 (571)
T ss_dssp S
T ss_pred C
Confidence 4
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.96 E-value=5.6e-08 Score=105.64 Aligned_cols=263 Identities=10% Similarity=0.097 Sum_probs=171.1
Q ss_pred EEEeeCCCeEEeeeccccceeeEeec--------------------------------------CCCceEEEEEEee---
Q 011970 101 VFALAHSGVCAAFSRETNRRICFLNV--------------------------------------SPDEVIRSLFYNK--- 139 (474)
Q Consensus 101 las~s~dgtiklW~~~tg~~l~~l~g--------------------------------------~~~~~i~sv~fsp--- 139 (474)
+.||.++|.++++-+.+++.|..+.. ...+-..-+..|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 57899999999999988887765321 1111122245554
Q ss_pred --CCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeC-CCCeEEEEec-----------
Q 011970 140 --NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDD-VNGKVLTYSA----------- 205 (474)
Q Consensus 140 --dg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~-~nGk~LaS~s----------- 205 (474)
||++|-... . ++ ..+-+-|+.+.++++.+ +.-....|..++|.. |||++|..++
T Consensus 98 ~~DG~~lfVnd--~-~~------~rVavIdl~t~~~~~ii---~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 98 KYDGRFLFMND--K-AN------TRVARVRCDVMKCDAIL---EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEEEEEEE--T-TT------TEEEEEETTTTEEEEEE---ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred CcCCCEEEEEc--C-CC------CEEEEEECCCceEeeEE---eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 888776522 2 33 34555566666654411 110112244677754 6888876663
Q ss_pred -------CCCcEEEeecCCCeEEEEEc-CCcEEEEEEcC-CceEEEEecCCCC---------------------------
Q 011970 206 -------QDSIYKVFDLKNYTMLYSIS-DKHVQEIKISP-GIMLLIFNRSSSH--------------------------- 249 (474)
Q Consensus 206 -------~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSp-g~~la~~s~~s~D--------------------------- 249 (474)
.++++-+.|.++.+.+.++. +.+-..+++|| |.++.+++..++.
T Consensus 166 ~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v 245 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI 245 (595)
T ss_dssp STTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH
T ss_pred ccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEec
Confidence 35689999999999888886 34456688997 5555555544311
Q ss_pred --------ccEEEEecCC--CeE-EEEEeecCcceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCc------------e
Q 011970 250 --------VPLKILSIED--GTV-LKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAE------------L 305 (474)
Q Consensus 250 --------~tIkLWdi~t--G~~-L~tl~~h~~~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~tg~------------~ 305 (474)
+.|.+.|.++ |+. +.++.-- ..--.|.|+ |||.++++++ .+.+|-++|+.+.+ .
T Consensus 246 ~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~s-PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 246 AAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMA-PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp HHTCSEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEEC-TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred cCCCeeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEc-CCCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 2589999998 766 6666521 233567776 7888888875 79999999999763 2
Q ss_pred EEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-----------CcEEEEeccCCCCcCCCCeeEEEECCCCCEE
Q 011970 306 MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-----------GELVTSFEDHLLWHPDCNTNNIYITSDQDLI 373 (474)
Q Consensus 306 ~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-----------G~ll~tl~gH~~~~~~~~v~svafSpDg~~L 373 (474)
..... -...++-++|+|||...++.- |.+|-+||++ .+.+.++.-|...-..+.-..+.++|||++|
T Consensus 324 ~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 324 VAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp EECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred EEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEE
Confidence 22222 124689999999996666666 9999999983 3578888877542000011235679999999
Q ss_pred EEEec
Q 011970 374 ISYCK 378 (474)
Q Consensus 374 aS~s~ 378 (474)
++.++
T Consensus 403 ~~~Nk 407 (595)
T 1fwx_A 403 VCLSK 407 (595)
T ss_dssp EEEES
T ss_pred EEcCC
Confidence 99997
No 243
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.94 E-value=4.6e-06 Score=91.81 Aligned_cols=313 Identities=12% Similarity=0.046 Sum_probs=192.0
Q ss_pred cccEEEEEee-ccEEEEeeCCCeEEeeeccccceeeEee-------------cCCCceEEEEEEeeCCCEEEEEEeecCC
Q 011970 88 RTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLN-------------VSPDEVIRSLFYNKNNDSLITVSVYASD 153 (474)
Q Consensus 88 ~~~V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~-------------g~~~~~i~sv~fspdg~~Lis~S~~~s~ 153 (474)
...|.+|... ...|..++..+-+..++..+++...... +-+.+.|++++..++|..-+. +.
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWig-----t~ 331 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIG-----TW 331 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEE-----EB
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEE-----ec
Confidence 3568888886 5566777774556678887766433221 123467999999999986553 22
Q ss_pred CccceeeeEEEEeEeccCCCCCccceeee-------c--cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEE--
Q 011970 154 NFSSLKCRSTKIEYIRRGKPDSGFALFES-------E--SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-- 222 (474)
Q Consensus 154 d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~-------~--~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~-- 222 (474)
+ ..+..++...+.+ ..+.. . ....|.++..+ ++|.+.+ |+.++-+.++|.++++..+
T Consensus 332 ~------~Gl~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~v~~i~~d-~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~ 399 (781)
T 3v9f_A 332 G------GGINFISNAPPTF----HTWSYSPTQMNESSLSNKVVSSVCDD-GQGKLWI-GTDGGGINVFENGKRVAIYNK 399 (781)
T ss_dssp S------SCEEEECSSCCSC----EEEC----CCCSSCCSSSCEEEEEEC-TTSCEEE-EEBSSCEEEEETTEEEEECC-
T ss_pred C------CeEEEeCCCCCcc----eeeccCccccccCCCCCcceEEEEEc-CCCCEEE-EeCCCcEEEEECCCCeEEEcc
Confidence 2 2344444333332 11110 0 12346678886 6887665 4444557788987665432
Q ss_pred ---EEcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEee---cCcceeEEEEEecCCCeEEEEeCCCcEE
Q 011970 223 ---SISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH---LLHRNKKVDFIEQFNEKLLVKQENENLQ 296 (474)
Q Consensus 223 ---tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~---h~~~v~~V~F~~~~~~~ll~~~~D~tIk 296 (474)
.+....|.++...+++.|.++.. ++-|..+|.++|+... +.. ....+.++.. ..++.|.++.. +-|.
T Consensus 400 ~~~~~~~~~v~~i~~d~~g~lWigt~---~~Gl~~~~~~~~~~~~-~~~~~~~~~~v~~i~~--d~~g~lwigt~-~Gl~ 472 (781)
T 3v9f_A 400 ENRELLSNSVLCSLKDSEGNLWFGTY---LGNISYYNTRLKKFQI-IELEKNELLDVRVFYE--DKNKKIWIGTH-AGVF 472 (781)
T ss_dssp ----CCCSBEEEEEECTTSCEEEEET---TEEEEEECSSSCEEEE-CCSTTTCCCCEEEEEE--CTTSEEEEEET-TEEE
T ss_pred CCCCCCCcceEEEEECCCCCEEEEec---cCCEEEEcCCCCcEEE-eccCCCCCCeEEEEEE--CCCCCEEEEEC-CceE
Confidence 23456899999987666666532 3568899988876533 321 1245666653 33578888776 5688
Q ss_pred EEECCCCceEEecccc-----CCceEEEEEcCCCcEEEEEcCCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCC
Q 011970 297 ILDVRNAELMEVSRTE-----FMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQD 371 (474)
Q Consensus 297 IWDv~tg~~~~~l~~h-----~~~v~sv~Fspdg~llaS~sD~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~ 371 (474)
++|..+++........ ...|.++...++|++.+...++-+-.+|.+++.++.+..... .++..|.+|+..++|+
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~-l~~~~i~~i~~d~~g~ 551 (781)
T 3v9f_A 473 VIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEG-FCSNTINQIYRSSKGQ 551 (781)
T ss_dssp EEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTT-CSCSCEEEEEECTTSC
T ss_pred EEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCC-CCCCeeEEEEECCCCC
Confidence 9999988765543222 467899999999999988773346678887555555543211 1233478999999999
Q ss_pred EEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEE
Q 011970 372 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSL 451 (474)
Q Consensus 372 ~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl 451 (474)
+.++.. .|-|..+|..+++. ..+......|. ..|.++
T Consensus 552 lWi~T~------------~Glv~~~d~~~~~~-~~~~~~~gl~~------------------------------~~i~~i 588 (781)
T 3v9f_A 552 MWLATG------------EGLVCFPSARNFDY-QVFQRKEGLPN------------------------------THIRAI 588 (781)
T ss_dssp EEEEET------------TEEEEESCTTTCCC-EEECGGGTCSC------------------------------CCCCEE
T ss_pred EEEEEC------------CCceEEECCCCCcE-EEccccCCCCC------------------------------ceEEEE
Confidence 888642 56548889877764 34433322111 156788
Q ss_pred EEcCCCCEEEEEcCCCcE
Q 011970 452 FYDEERNEIYTGNRHGLV 469 (474)
Q Consensus 452 afSpDg~~LaSgs~DgtV 469 (474)
..+++|+..+++ .+|.+
T Consensus 589 ~~d~~g~lW~~t-~~Gl~ 605 (781)
T 3v9f_A 589 SEDKNGNIWAST-NTGIS 605 (781)
T ss_dssp EECSSSCEEEEC-SSCEE
T ss_pred EECCCCCEEEEc-CCceE
Confidence 888888766655 44543
No 244
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.93 E-value=1.5e-06 Score=93.97 Aligned_cols=280 Identities=13% Similarity=0.078 Sum_probs=164.9
Q ss_pred eccEEEEeeCCCeEEeeeccccceeeEeecCCCc--------eEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEe
Q 011970 97 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDE--------VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 168 (474)
Q Consensus 97 s~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~--------~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i 168 (474)
.++.|+.++.++.+..+|.+||+.+=........ .-+++++ .+..|+.++ .+ ..+.-.|.
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t----~d------g~l~AlD~ 134 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGT----LD------ASVVALNK 134 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEE----TT------TEEEEEES
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEe----CC------CEEEEEEC
Confidence 4667777776444889999999988766542111 0133343 344555543 23 34555677
Q ss_pred ccCCCCCccceeeecc--------ccCceEEEEe-CCCCe-EEEEec------CCCcEEEeecCCCeEEEEEcCCc----
Q 011970 169 RRGKPDSGFALFESES--------LKWPGFVEFD-DVNGK-VLTYSA------QDSIYKVFDLKNYTMLYSISDKH---- 228 (474)
Q Consensus 169 ~~G~~~~~~~lf~~~~--------~~~~~~V~Fs-~~nGk-~LaS~s------~D~tiKlWdl~tg~~l~tl~~~~---- 228 (474)
.+|+. +|+... ....- +.+. ..+|+ .|..++ .++.|.-+|.+||+++.+.+...
T Consensus 135 ~TG~~-----~W~~~~~~~~~~~~~~~sP-~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~ 208 (582)
T 1flg_A 135 NTGKV-----VWKKKFADHGAGYTMTGAP-TIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMG 208 (582)
T ss_dssp SSCCE-----EEEEECSCGGGTCBCCSCC-EEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEE
T ss_pred CCCCE-----EeeecCCCCCcCcccccCC-EEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccc
Confidence 78886 343210 00001 2222 12344 333333 38899999999999988765321
Q ss_pred --------------------------------------EE-EEEEcC-CceEEEEecC-----------CC------C--
Q 011970 229 --------------------------------------VQ-EIKISP-GIMLLIFNRS-----------SS------H-- 249 (474)
Q Consensus 229 --------------------------------------V~-~vafSp-g~~la~~s~~-----------s~------D-- 249 (474)
+| ..++.| .+++.+.... .. |
T Consensus 209 p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~ 288 (582)
T 1flg_A 209 RLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSL 288 (582)
T ss_dssp EETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCT
T ss_pred cccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCc
Confidence 11 245555 4555544321 11 2
Q ss_pred --ccEEEEecCCCeEEEEEee--cCcc----eeEEEEEe---cCCC---eEEEEeCCCcEEEEECCCCceEEeccccC--
Q 011970 250 --VPLKILSIEDGTVLKVFYH--LLHR----NKKVDFIE---QFNE---KLLVKQENENLQILDVRNAELMEVSRTEF-- 313 (474)
Q Consensus 250 --~tIkLWdi~tG~~L~tl~~--h~~~----v~~V~F~~---~~~~---~ll~~~~D~tIkIWDv~tg~~~~~l~~h~-- 313 (474)
..|.-+|.+||+.+-.++. |..+ ..+..+.. .+++ .++.++.|+.+.++|.++|+.+-......
T Consensus 289 ~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~ 368 (582)
T 1flg_A 289 YTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNI 368 (582)
T ss_dssp TCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCC
T ss_pred ccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCc
Confidence 5799999999999988863 2111 11222222 2343 35557899999999999999874322110
Q ss_pred Cce-------------------------------------------EEEEEcCCCcEEEEE-------------------
Q 011970 314 MTP-------------------------------------------SAFIFLYENQLFLTF------------------- 331 (474)
Q Consensus 314 ~~v-------------------------------------------~sv~Fspdg~llaS~------------------- 331 (474)
.+. ..++|+|+..++...
T Consensus 369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCC
Confidence 000 134567665544332
Q ss_pred --------------c-CCcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEE
Q 011970 332 --------------R-NRTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINV 395 (474)
Q Consensus 332 --------------s-D~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIkl 395 (474)
. +++|..||. +|+.+-+.+.+... ++-.+...|.+++.++. |+.++.
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~------~~g~~~tagglvf~g~~-----------dg~l~A 511 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPL------WAGVLATAGNLVFTGTG-----------DGYFKA 511 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCC------CSCCEEETTTEEEEECT-----------TSEEEE
T ss_pred ceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCC------cccceEeCCCEEEEECC-----------CCcEEE
Confidence 1 578999999 59988776644322 22222234667777765 999999
Q ss_pred EeCCCCeEEEEecCCC
Q 011970 396 SSILTGKCLAKINATN 411 (474)
Q Consensus 396 Wdi~tG~cl~tl~gH~ 411 (474)
+|..||+.+.+++...
T Consensus 512 ~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 512 FDAKSGKELWKFQTGS 527 (582)
T ss_dssp EETTTCCEEEEEECSS
T ss_pred EECCCCCEEEEecCCC
Confidence 9999999999987654
No 245
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.93 E-value=5.7e-07 Score=88.67 Aligned_cols=194 Identities=11% Similarity=0.007 Sum_probs=139.6
Q ss_pred ceEEEEeCCCCeEEEEecC--CCcEEEeecCCCeEEEEEc-C--CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeE
Q 011970 188 PGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSIS-D--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV 262 (474)
Q Consensus 188 ~~~V~Fs~~nGk~LaS~s~--D~tiKlWdl~tg~~l~tl~-~--~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~ 262 (474)
+..++|+ +||.+.++.+. +++|.+.|+++|+.+.++. + .....+++.+ +.|.... -.++.+-++|.+|++.
T Consensus 23 ~~Gl~~~-~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t--~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 23 TQGLVYA-ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVV--WLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEEEC-STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEE--TTCSEEEEEETTTTEE
T ss_pred cccEEEe-CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEE--ecCCEEEEEECCCCcE
Confidence 4468998 67888887764 6899999999999998875 2 2445677774 4555554 3468899999999999
Q ss_pred EEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecc-cc----CCceEEEEEcCCCcEEEEEc-CCcE
Q 011970 263 LKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR-TE----FMTPSAFIFLYENQLFLTFR-NRTV 336 (474)
Q Consensus 263 L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~-~h----~~~v~sv~Fspdg~llaS~s-D~tI 336 (474)
+.++..-...-+.++ ++++++.++..+++|.++|.++.+.+.... +. ...++.+.|. +|++++... +++|
T Consensus 99 ~~~i~~g~~~g~glt---~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 99 IKNFTHQMKDGWGLA---TDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEEECCSSSCCEEE---ECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEECCCCCeEEEE---ECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 999973212224444 578888888778999999999988765532 21 1246788888 889998887 8899
Q ss_pred EEEeC-CCcEEEEeccCCC--------CcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCC
Q 011970 337 AVWNF-RGELVTSFEDHLL--------WHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 399 (474)
Q Consensus 337 klWd~-~G~ll~tl~gH~~--------~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~ 399 (474)
.+=|. +|+.+.++.-... .-.....+.|+|+|||+.|...++ ..+++..-++.
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk----------~~~~v~~i~l~ 236 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK----------LWPKLFEIKLH 236 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET----------TCSEEEEEEEE
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC----------CCCeEEEEEEe
Confidence 99999 5999988862110 000112589999999987777665 35666665553
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.93 E-value=1.2e-06 Score=83.07 Aligned_cols=192 Identities=10% Similarity=0.093 Sum_probs=123.9
Q ss_pred CeEEEEecCCCcEEEeecCCCeE-------EEEEcCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEeec
Q 011970 198 GKVLTYSAQDSIYKVFDLKNYTM-------LYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL 269 (474)
Q Consensus 198 Gk~LaS~s~D~tiKlWdl~tg~~-------l~tl~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h 269 (474)
|++|..+.. +.|+.+|+.+... +..........++++| ++.|..+.. ..+.|..+++.++.....+...
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~ 77 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI--SEPSIGRASLHGGEPTTIIRQD 77 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET--TTTEEEEEESSSCCCEEEECTT
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC--CCCEEEEEecCCCCcEEEEECC
Confidence 344544443 4688888765432 2222345678999997 677777643 3578999998766544333332
Q ss_pred CcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcC-CCcEEEEEc---CCcEEEEeCCCc
Q 011970 270 LHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR---NRTVAVWNFRGE 344 (474)
Q Consensus 270 ~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s---D~tIklWd~~G~ 344 (474)
......++|. ++++.|.++ ..++.|.++|+...............+..+++.| +|.++++.. .+.|...+++|+
T Consensus 78 ~~~p~~ia~d-~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 78 LGSPEGIALD-HLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CCCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCCccEEEEE-ecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 3456788886 456777776 4678999999875443333333446789999999 567777764 368888898887
Q ss_pred EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEe
Q 011970 345 LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 345 ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl 407 (474)
..+.+..-.... -+.++|+||++.|.-+.. ..+.|...|+.+++....+
T Consensus 157 ~~~~~~~~~~~~----P~gia~d~~~~~lyv~d~----------~~~~I~~~~~~g~~~~~~~ 205 (267)
T 1npe_A 157 NRRILAQDNLGL----PNGLTFDAFSSQLCWVDA----------GTHRAECLNPAQPGRRKVL 205 (267)
T ss_dssp CCEEEECTTCSC----EEEEEEETTTTEEEEEET----------TTTEEEEEETTEEEEEEEE
T ss_pred CcEEEEECCCCC----CcEEEEcCCCCEEEEEEC----------CCCEEEEEecCCCceEEEe
Confidence 655553211111 479999999876654432 2689999998654443333
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.92 E-value=1.7e-07 Score=102.69 Aligned_cols=244 Identities=14% Similarity=0.123 Sum_probs=151.8
Q ss_pred EEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCC---cEEEEEEcC---CceEEEEecCC---CCccEEEEecCCCe
Q 011970 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK---HVQEIKISP---GIMLLIFNRSS---SHVPLKILSIEDGT 261 (474)
Q Consensus 191 V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~---~V~~vafSp---g~~la~~s~~s---~D~tIkLWdi~tG~ 261 (474)
+++. +|++ ..++.|+.+..+|.+||+.+.+.... ....+.-+| ++.+++..... .++.|.-+|.+||+
T Consensus 113 ~~~~--~~~v-~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~ 189 (668)
T 1kv9_A 113 VALW--GDKV-YVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGK 189 (668)
T ss_dssp CEEE--BTEE-EEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred eEEE--CCEE-EEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCc
Confidence 4554 4654 45678999999999999998776521 111222223 55665543221 25789999999999
Q ss_pred EEEEEeec--Cc----------------------------ce-eEEEEEecCCCeEEEEeCCC-----------------
Q 011970 262 VLKVFYHL--LH----------------------------RN-KKVDFIEQFNEKLLVKQENE----------------- 293 (474)
Q Consensus 262 ~L~tl~~h--~~----------------------------~v-~~V~F~~~~~~~ll~~~~D~----------------- 293 (474)
++-++... .. .+ ..+++. +.++.+.++..++
T Consensus 190 ~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d-~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~ 268 (668)
T 1kv9_A 190 LAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYD-PELDLLYVGTGNGSPWNREVRSPGGGDNLY 268 (668)
T ss_dssp EEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEE-TTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred EEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEc-CCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 99888621 00 01 135554 4567777776555
Q ss_pred --cEEEEECCCCceEEecc--ccCC-------ceEEEEEcCCCc---EEEEEc-CCcEEEEeC-CCcEEEEeccCC-CCc
Q 011970 294 --NLQILDVRNAELMEVSR--TEFM-------TPSAFIFLYENQ---LFLTFR-NRTVAVWNF-RGELVTSFEDHL-LWH 356 (474)
Q Consensus 294 --tIkIWDv~tg~~~~~l~--~h~~-------~v~sv~Fspdg~---llaS~s-D~tIklWd~-~G~ll~tl~gH~-~~~ 356 (474)
.|.-+|..||+.+-... .|.. .+....+..||+ +++.++ ||.+.++|. +|+++...+-.. .|.
T Consensus 269 ~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 348 (668)
T 1kv9_A 269 LSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWA 348 (668)
T ss_dssp TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSE
T ss_pred eeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccc
Confidence 49999999999875433 2331 222223345776 677777 999999999 599985433211 110
Q ss_pred C-------------C----------C-------CeeEEEECCCCCEEEEEecCCC-----c-------cc----------
Q 011970 357 P-------------D----------C-------NTNNIYITSDQDLIISYCKAEP-----E-------DQ---------- 384 (474)
Q Consensus 357 ~-------------~----------~-------~v~svafSpDg~~LaS~s~~~~-----~-------~~---------- 384 (474)
. + | +-..++|+|+..++......-+ . ..
T Consensus 349 ~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 428 (668)
T 1kv9_A 349 EKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADA 428 (668)
T ss_dssp EEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGC
T ss_pred cccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCcccccc
Confidence 0 0 0 0013788898777664221000 0 00
Q ss_pred --c-ccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEE
Q 011970 385 --W-MEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY 461 (474)
Q Consensus 385 --~-~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~La 461 (474)
. ....+|+|.-||+.||+.+.+.+.+. .++...+...|..|+
T Consensus 429 ~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-----------------------------------~~~~~~~~t~gg~vf 473 (668)
T 1kv9_A 429 TDVPAAVVSGALLAWDPVKQKAAWKVPYPT-----------------------------------HWNGGTLSTAGNLVF 473 (668)
T ss_dssp CCCCGGGCEEEEEEEETTTTEEEEEEEESS-----------------------------------SCCCCEEEETTTEEE
T ss_pred CCCCCCCccceEEEEeCCCCcEEEEccCCC-----------------------------------CCcCceeEeCCCEEE
Confidence 0 12346999999999999998876554 222334455788899
Q ss_pred EEcCCCcEEEcc
Q 011970 462 TGNRHGLVHVWS 473 (474)
Q Consensus 462 Sgs~DgtVklWd 473 (474)
.|+.|+.|++||
T Consensus 474 ~g~~dg~l~a~d 485 (668)
T 1kv9_A 474 QGTAAGQMHAYS 485 (668)
T ss_dssp EECTTSEEEEEE
T ss_pred EECCcccchhhh
Confidence 999999999987
No 248
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.89 E-value=1.1e-06 Score=95.73 Aligned_cols=281 Identities=12% Similarity=0.078 Sum_probs=171.6
Q ss_pred eccEEEEeeC-CCeEEeeec-cccceeeEeecCCC----------ceEEEEEEeeCCCE----EEEEEeecCCCccceee
Q 011970 97 ARDIVFALAH-SGVCAAFSR-ETNRRICFLNVSPD----------EVIRSLFYNKNNDS----LITVSVYASDNFSSLKC 160 (474)
Q Consensus 97 s~~~las~s~-dgtiklW~~-~tg~~l~~l~g~~~----------~~i~sv~fspdg~~----Lis~S~~~s~d~s~Lk~ 160 (474)
.+++|+.++. ++.+..+|. .||+.+=....... ...+.++++|.+.. |+.++ .|
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t----~d------ 130 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ----LD------ 130 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC----TT------
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc----CC------
Confidence 3788888888 899999999 89998866543221 11356777765555 65533 33
Q ss_pred eEEEEeEeccCCCCCccceeeeccc----c-Cce-EEEEeCCCCeEEEEec-----CCCcEEEeecCCCeEEEEEcCC-c
Q 011970 161 RSTKIEYIRRGKPDSGFALFESESL----K-WPG-FVEFDDVNGKVLTYSA-----QDSIYKVFDLKNYTMLYSISDK-H 228 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~~~~----~-~~~-~V~Fs~~nGk~LaS~s-----~D~tiKlWdl~tg~~l~tl~~~-~ 228 (474)
..+.-.|..+|+. +|+.... . .+. .-... +|++++.++ .|+.|.-+|.+||+++..+... .
T Consensus 131 g~l~AlDa~TG~~-----~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 131 GNVAALNAETGET-----VWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp SEEEEEETTTCCE-----EEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred CEEEEEECCCCCE-----EEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 3555567788886 3443100 0 000 11222 677776554 4899999999999999876521 1
Q ss_pred --------------------------------------EE-EEEEcC-CceEEEEecCC---------C----CccEEEE
Q 011970 229 --------------------------------------VQ-EIKISP-GIMLLIFNRSS---------S----HVPLKIL 255 (474)
Q Consensus 229 --------------------------------------V~-~vafSp-g~~la~~s~~s---------~----D~tIkLW 255 (474)
+| ..++.| ++++....... . ...|.-+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 12 245554 45555443211 0 1378999
Q ss_pred ecCCCeEEEEEeecCccee------E-EEEE-e-cCCC--eEEE-EeCCCcEEEEECCCCceEEeccc-c----------
Q 011970 256 SIEDGTVLKVFYHLLHRNK------K-VDFI-E-QFNE--KLLV-KQENENLQILDVRNAELMEVSRT-E---------- 312 (474)
Q Consensus 256 di~tG~~L~tl~~h~~~v~------~-V~F~-~-~~~~--~ll~-~~~D~tIkIWDv~tg~~~~~l~~-h---------- 312 (474)
|.+||+.+-.++...+..+ + +-+- + .+++ .+++ ++.++.+.++|.++|+++-...- .
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~ 363 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDL 363 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECT
T ss_pred eCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccccc
Confidence 9999999988874322111 1 1111 1 2342 4444 67999999999999998753210 0
Q ss_pred -CCce---------------------------EEEEEcCCCcEEEEE---------------------------------
Q 011970 313 -FMTP---------------------------SAFIFLYENQLFLTF--------------------------------- 331 (474)
Q Consensus 313 -~~~v---------------------------~sv~Fspdg~llaS~--------------------------------- 331 (474)
...+ ...+|+|+.+++...
T Consensus 364 ~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~ 443 (599)
T 1w6s_A 364 KTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPK 443 (599)
T ss_dssp TTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTT
T ss_pred CCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCc
Confidence 0000 145677777766442
Q ss_pred -------cCCcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 332 -------RNRTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 332 -------sD~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
.++.|..||. +|+.+-+.+-... +++-.++..|.++..++. |+.++.+|..||+.
T Consensus 444 ~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~------~~~g~~~tagg~vf~gt~-----------dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 444 GDRQNYEGLGQIKAYNAITGDYKWEKMERFA------VWGGTMATAGDLVFYGTL-----------DGYLKARDSDTGDL 506 (599)
T ss_dssp SBTTTTBCCEEEEEECTTTCCEEEEEEESSC------CCSBCEEETTTEEEEECT-----------TSEEEEEETTTCCE
T ss_pred CCcccCCCcCeEEEEECCCCCEEeEecCCCC------ccCcceEecCCEEEEECC-----------CCeEEEEECCCCCE
Confidence 2368999999 5998876642211 111123335666666765 99999999999999
Q ss_pred EEEecCCC
Q 011970 404 LAKINATN 411 (474)
Q Consensus 404 l~tl~gH~ 411 (474)
+.+++-..
T Consensus 507 lW~~~l~~ 514 (599)
T 1w6s_A 507 LWKFKIPS 514 (599)
T ss_dssp EEEEECSS
T ss_pred EEEeeCCC
Confidence 99886543
No 249
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.87 E-value=4.6e-07 Score=95.74 Aligned_cols=201 Identities=11% Similarity=0.062 Sum_probs=130.1
Q ss_pred CCCeE-EEEecCCCcEEEeecCCC----eEEEEEc--------C-CcEEEEEEcCCceEEEEecCCC----CccEEEEec
Q 011970 196 VNGKV-LTYSAQDSIYKVFDLKNY----TMLYSIS--------D-KHVQEIKISPGIMLLIFNRSSS----HVPLKILSI 257 (474)
Q Consensus 196 ~nGk~-LaS~s~D~tiKlWdl~tg----~~l~tl~--------~-~~V~~vafSpg~~la~~s~~s~----D~tIkLWdi 257 (474)
+++++ ++++-.+++|.|.|+++- +...++. + ..=..+..+|++++++. .++. .+.|-+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~-~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISA-LGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEE-EEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEc-CCCcCCCCCCeEEEEEC
Confidence 35655 566778899999999865 6778883 1 13456888997744433 3221 257999999
Q ss_pred CCCeEEEEEeecCc---ceeEEEEEecCCCeEEEEe-------------------CCCcEEEEECCCCceEEeccc--cC
Q 011970 258 EDGTVLKVFYHLLH---RNKKVDFIEQFNEKLLVKQ-------------------ENENLQILDVRNAELMEVSRT--EF 313 (474)
Q Consensus 258 ~tG~~L~tl~~h~~---~v~~V~F~~~~~~~ll~~~-------------------~D~tIkIWDv~tg~~~~~l~~--h~ 313 (474)
+|++++.+.+-..+ --..+.|+ |++..++++. .+.+|.+||+.+++.++++.- ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~-p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWN-LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEE-TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEEC-CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 99999999972111 12345556 5556666663 379999999999988876443 22
Q ss_pred CceEEEEE--cCCCcEEEEEc-------CCcEEEEeCC-CcE--EEEe--ccC--CCCcC---------CCCeeEEEECC
Q 011970 314 MTPSAFIF--LYENQLFLTFR-------NRTVAVWNFR-GEL--VTSF--EDH--LLWHP---------DCNTNNIYITS 368 (474)
Q Consensus 314 ~~v~sv~F--spdg~llaS~s-------D~tIklWd~~-G~l--l~tl--~gH--~~~~~---------~~~v~svafSp 368 (474)
..+..+.| +|+|+++-.++ +++|-+|..+ |+. ++.+ ... ...++ ......|.+||
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 45666655 99998755432 4578777764 542 2221 110 00000 01146899999
Q ss_pred CCCEEEEEecCCCccccccCCCCeEEEEeCC---CCeEEEEec
Q 011970 369 DQDLIISYCKAEPEDQWMEGSAGSINVSSIL---TGKCLAKIN 408 (474)
Q Consensus 369 Dg~~LaS~s~~~~~~~~~~s~DgtIklWdi~---tG~cl~tl~ 408 (474)
||++|-.++. ..++|.++|+. +.+.+.++.
T Consensus 331 DGrfLYVSnr----------g~d~VavfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 331 DDKFLYLSLW----------GIGEVRQYDISNPFKPVLTGKVK 363 (462)
T ss_dssp TSCEEEEEET----------TTTEEEEEECSSTTSCEEEEEEE
T ss_pred CCCEEEEEeC----------CCCEEEEEEecCCCCcEEEEEEE
Confidence 9999998776 26899999985 346666664
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.81 E-value=1.3e-07 Score=102.68 Aligned_cols=195 Identities=10% Similarity=0.009 Sum_probs=136.0
Q ss_pred CCeEEE-EecCCCcEEEeecCCCeEEE--EEc-CCcEEEEEE-c-C-CceEEEEec---------------CCCCccEEE
Q 011970 197 NGKVLT-YSAQDSIYKVFDLKNYTMLY--SIS-DKHVQEIKI-S-P-GIMLLIFNR---------------SSSHVPLKI 254 (474)
Q Consensus 197 nGk~La-S~s~D~tiKlWdl~tg~~l~--tl~-~~~V~~vaf-S-p-g~~la~~s~---------------~s~D~tIkL 254 (474)
||++|- ....+..|-+-|+++.++.. ++. +.....++| + | ++++.+++. ...+.++.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 677654 44456679999999999988 554 466889998 5 7 555555431 123468999
Q ss_pred EecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCC--------------------------------------cEE
Q 011970 255 LSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENE--------------------------------------NLQ 296 (474)
Q Consensus 255 Wdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~--------------------------------------tIk 296 (474)
.|.++.+.+.++.-- ..-.-++++ +++..+.+++++. .|.
T Consensus 180 ID~~t~~v~~qI~Vg-g~pd~~~~s-pdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVS-GNLDNCDAD-YEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEES-SCCCCEEEC-SSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeC-CCccceEEC-CCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 999999999888721 122445655 5677777776442 588
Q ss_pred EEECCC--Cce-EEeccccCCceEEEEEcCCCcEEEEEc--CCcEEEEeCC-Cc------------EEEEeccCCCCcCC
Q 011970 297 ILDVRN--AEL-MEVSRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GE------------LVTSFEDHLLWHPD 358 (474)
Q Consensus 297 IWDv~t--g~~-~~~l~~h~~~v~sv~Fspdg~llaS~s--D~tIklWd~~-G~------------ll~tl~gH~~~~~~ 358 (474)
+.|.++ ++. +....- ...+..+.|+|||+++..+. +.+|.+.|+. .+ .+.+.+--..
T Consensus 258 VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g---- 332 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG---- 332 (595)
T ss_dssp EEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC----
T ss_pred EEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC----
Confidence 999998 544 333211 12566799999999887776 9999999996 32 4455543333
Q ss_pred CCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCC----------CeEEEEecCCC
Q 011970 359 CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT----------GKCLAKINATN 411 (474)
Q Consensus 359 ~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~t----------G~cl~tl~gH~ 411 (474)
-+.++|+||| .+-.... -|++|-.||+.+ .+.+.++.-|-
T Consensus 333 --P~h~aF~~dG-~aY~t~~----------ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~y 382 (595)
T 1fwx_A 333 --PLHTAFDGRG-NAYTSLF----------LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHY 382 (595)
T ss_dssp --EEEEEECTTS-EEEEEET----------TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSS
T ss_pred --cceEEECCCC-eEEEEEe----------cCCcEEEEEhhHhhhhhcccccceeEEEeeccc
Confidence 3789999999 6555443 389999999987 67888887764
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.81 E-value=6.5e-07 Score=88.26 Aligned_cols=205 Identities=11% Similarity=0.096 Sum_probs=136.2
Q ss_pred CeEEEEEcC---CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeE--EEEEecCCCeEEEEe-C
Q 011970 218 YTMLYSISD---KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK--VDFIEQFNEKLLVKQ-E 291 (474)
Q Consensus 218 g~~l~tl~~---~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~--V~F~~~~~~~ll~~~-~ 291 (474)
++.+.+++. ...+.+.|++ +.|..+....+...|+..|++||+.++++.-. ...+. +++ ++++|.... .
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~---~g~~ly~ltw~ 105 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRN-GYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISD---WKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEET-TEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEE---ETTEEEEEESS
T ss_pred eEEEEEecCCCCcccceEEEEC-CEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEE---eCCEEEEEEee
Confidence 455667752 4589999995 46655543333458999999999999998732 34444 443 467777764 6
Q ss_pred CCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCC
Q 011970 292 NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSD 369 (474)
Q Consensus 292 D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpD 369 (474)
++.+.++|.++.+.+.++.... .-+.+ .+||+.|..+. +++|.++|.. .+.+.+++--....+-..+|.+.+. |
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~-eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDG-EGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSS-CCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECccCcEEEEEECCC-CceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C
Confidence 8999999999999998765422 33444 45666555555 7789999995 8888876542211010124667776 8
Q ss_pred CCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEE
Q 011970 370 QDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDIT 449 (474)
Q Consensus 370 g~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~ 449 (474)
|++.|..-. +++|-+-|..||+.+++|.-....|... ......+...
T Consensus 182 G~lyan~w~-----------~~~I~vIDp~tG~V~~~Id~~~L~~~~~----------------------~~~~~~~vlN 228 (262)
T 3nol_A 182 GEIFANVWQ-----------TNKIVRIDPETGKVTGIIDLNGILAEAG----------------------PLPSPIDVLN 228 (262)
T ss_dssp TEEEEEETT-----------SSEEEEECTTTCBEEEEEECTTGGGGSC----------------------SCCSSCCCEE
T ss_pred CEEEEEEcc-----------CCeEEEEECCCCcEEEEEECCcCccccc----------------------cccCcCCceE
Confidence 887765433 7799999999999999996543200000 0001122668
Q ss_pred EEEEcCCCCEEEEEc
Q 011970 450 SLFYDEERNEIYTGN 464 (474)
Q Consensus 450 slafSpDg~~LaSgs 464 (474)
.+||+|+++.|+-.+
T Consensus 229 GIA~dp~~~~lfVTG 243 (262)
T 3nol_A 229 GIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEC
Confidence 899999999887766
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.78 E-value=2.5e-06 Score=83.41 Aligned_cols=242 Identities=14% Similarity=0.056 Sum_probs=149.9
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEE-EEEc--------------------CCcEEEEEEcC-CceEEE
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSIS--------------------DKHVQEIKISP-GIMLLI 242 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l-~tl~--------------------~~~V~~vafSp-g~~la~ 242 (474)
+..|..++++ ++|++|.++..++.|..||..+++.. +... ......|++.| ++.|.+
T Consensus 18 ~~~p~~i~~d-~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 18 SYAPNSFTFD-STNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SSCCCCEECC-TTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred cCCceEEEEc-CCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 4567789997 68986777778899999998876543 2211 13578999997 777777
Q ss_pred EecCCCCccEEEEecCCCeEEEEEee-----cCcceeEEEEEec-CCCeEEEEe-C-----------------CCcEEEE
Q 011970 243 FNRSSSHVPLKILSIEDGTVLKVFYH-----LLHRNKKVDFIEQ-FNEKLLVKQ-E-----------------NENLQIL 298 (474)
Q Consensus 243 ~s~~s~D~tIkLWdi~tG~~L~tl~~-----h~~~v~~V~F~~~-~~~~ll~~~-~-----------------D~tIkIW 298 (474)
+... ..|..+|..+|+. ..+.. .......+++. + +| .+.++. . ++.|..+
T Consensus 97 ~d~~---~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d-~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 97 VDCY---YHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVD-QRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp EETT---TEEEEECTTCEEC-EEEESEETTEECSCEEEEEEC-TTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred EECC---CCEEEEeCCCCEE-EEecccCCCCcccccceEEEe-cCCC-EEEEECCcccccccccceehcccCCCceEEEE
Confidence 6432 3488889876643 33321 11234667764 4 44 455542 1 3678889
Q ss_pred ECCCCceEEeccccCCceEEEEEcCCCc-EEEEEc-CCcEEEEeCCCc---EEEEeccCCCCcCCCCeeEEEECCCCCEE
Q 011970 299 DVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFRGE---LVTSFEDHLLWHPDCNTNNIYITSDQDLI 373 (474)
Q Consensus 299 Dv~tg~~~~~l~~h~~~v~sv~Fspdg~-llaS~s-D~tIklWd~~G~---ll~tl~gH~~~~~~~~v~svafSpDg~~L 373 (474)
|..+++..... .....+..++|+|||+ ++++-. ++.|..++++|+ -...+..... -..+++.++|++.
T Consensus 171 d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g------P~gi~~d~~G~l~ 243 (322)
T 2fp8_A 171 DPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN------PGNIKRNADGHFW 243 (322)
T ss_dssp ETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS------EEEEEECTTSCEE
T ss_pred eCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC------CCCeEECCCCCEE
Confidence 98888754432 2345677899999998 556656 789999998642 1222221111 2679999999988
Q ss_pred EEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEE
Q 011970 374 ISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFY 453 (474)
Q Consensus 374 aS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slaf 453 (474)
++......... ..+..+.|..+|. .|+.+..+...... .+..++++++
T Consensus 244 va~~~~~~~~~-~~~~~~~v~~~d~-~G~~~~~~~~~~g~------------------------------~~~~~~~~~~ 291 (322)
T 2fp8_A 244 VSSSEELDGNM-HGRVDPKGIKFDE-FGNILEVIPLPPPF------------------------------AGEHFEQIQE 291 (322)
T ss_dssp EEEEEETTSST-TSCEEEEEEEECT-TSCEEEEEECCTTT------------------------------TTSCCCEEEE
T ss_pred EEecCcccccc-cCCCccEEEEECC-CCCEEEEEECCCCC------------------------------ccccceEEEE
Confidence 87532000000 0011356888885 69988888654320 0125667777
Q ss_pred cCCCCEEEEEcCCCcEEEcc
Q 011970 454 DEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 454 SpDg~~LaSgs~DgtVklWd 473 (474)
.+|+..++....+.|..++
T Consensus 292 -~~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 292 -HDGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp -ETTEEEEECSSCSEEEEEE
T ss_pred -eCCEEEEeecCCCceEEEe
Confidence 4676666666777776654
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.78 E-value=1.2e-06 Score=86.23 Aligned_cols=179 Identities=11% Similarity=0.070 Sum_probs=130.5
Q ss_pred EEEEeCCCCeEEEEecCCC--cEEEeecCCCeEEEEEc-CCcE--EEEEEcCCceEEEEecCCCCccEEEEecCCCeEEE
Q 011970 190 FVEFDDVNGKVLTYSAQDS--IYKVFDLKNYTMLYSIS-DKHV--QEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK 264 (474)
Q Consensus 190 ~V~Fs~~nGk~LaS~s~D~--tiKlWdl~tg~~l~tl~-~~~V--~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~ 264 (474)
.++|+ ||.+..|.+.++ .|++.|+++|+.+.++. +... ..|++.. ..|.... -.++.+-++|.+|++.+.
T Consensus 47 GL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g-~~ly~lt--w~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 47 GFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK-DKIVGLT--WKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET-TEEEEEE--SSSSEEEEEETTTCCEEE
T ss_pred eEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC-CEEEEEE--eeCCEEEEEECccCcEEE
Confidence 58897 688888888876 99999999999988876 3333 3466654 4554443 336789999999999999
Q ss_pred EEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecc----ccC-CceEEEEEcCCCcEEEEEc-CCcEEE
Q 011970 265 VFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR----TEF-MTPSAFIFLYENQLFLTFR-NRTVAV 338 (474)
Q Consensus 265 tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~----~h~-~~v~sv~Fspdg~llaS~s-D~tIkl 338 (474)
+|.... .=+.++ ++++.|.++..+++|.++|..+.+.+.... ++. ..+..+.+. +|++++... +++|.+
T Consensus 122 ti~~~~-eG~glt---~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 122 SFNYDG-EGWGLT---HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEECSS-CCCCEE---ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEECCC-CceEEe---cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE
Confidence 998422 224555 457788887668889999999998776522 122 334556665 899998887 889999
Q ss_pred EeC-CCcEEEEeccCCCC-------cCCCCeeEEEECCCCCEEEEEec
Q 011970 339 WNF-RGELVTSFEDHLLW-------HPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 339 Wd~-~G~ll~tl~gH~~~-------~~~~~v~svafSpDg~~LaS~s~ 378 (474)
-|. +|+.+.++.-.... -.+...|.||++|+++.|...++
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999 59999887653211 01123589999999888887765
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.78 E-value=2.8e-06 Score=82.79 Aligned_cols=207 Identities=13% Similarity=0.116 Sum_probs=134.8
Q ss_pred CCeEEEEEc---CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCccee--EEEEEecCCCeEEEE-e
Q 011970 217 NYTMLYSIS---DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNK--KVDFIEQFNEKLLVK-Q 290 (474)
Q Consensus 217 tg~~l~tl~---~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~--~V~F~~~~~~~ll~~-~ 290 (474)
+++.+.+++ ...++.+.|+++ .|..++...+...|+..|+++|+.+++..-. ...+ .+++ .+++|... -
T Consensus 8 ~~~v~~~~phd~~~ftqGL~~~~~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~---~~~~ly~ltw 82 (243)
T 3mbr_X 8 GYRVVKRYPHDTTAFTEGLFYLRG-HLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVA---WRDRLIQLTW 82 (243)
T ss_dssp CEEEEEEEECCTTCCEEEEEEETT-EEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEE---ETTEEEEEES
T ss_pred ceEEEEEcCCCCccccccEEEECC-EEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEE---eCCEEEEEEe
Confidence 345566665 256999999985 4444433333458999999999999988732 2333 3443 36777765 4
Q ss_pred CCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECC
Q 011970 291 ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS 368 (474)
Q Consensus 291 ~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSp 368 (474)
.++.+.++|.++.+.+.++... ...+.++ +|++.|..+. +++|.++|.. .+.+.+++-.....+-..+|.+.+.
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~- 158 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV- 158 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred eCCEEEEEECCcCcEEEEEeCC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-
Confidence 7899999999999999876543 2445654 5555555555 8899999984 8888877642211110124556654
Q ss_pred CCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCE
Q 011970 369 DQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDI 448 (474)
Q Consensus 369 Dg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V 448 (474)
+|++.|-.-. +..|-+-|..||+.+.+|.-....|..... . ....+..
T Consensus 159 ~G~lyanvw~-----------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~--------------------~-~~~~~vl 206 (243)
T 3mbr_X 159 NGELLANVWL-----------TSRIARIDPASGKVVAWIDLQALVPDADAL--------------------T-DSTNDVL 206 (243)
T ss_dssp TTEEEEEETT-----------TTEEEEECTTTCBEEEEEECGGGSTTTTSC--------------------C-CTTSSCE
T ss_pred CCEEEEEECC-----------CCeEEEEECCCCCEEEEEECCcCccccccc--------------------c-CCcCCce
Confidence 7887765433 678999999999999999754321110000 0 0011267
Q ss_pred EEEEEcCCCCEEEEEc
Q 011970 449 TSLFYDEERNEIYTGN 464 (474)
Q Consensus 449 ~slafSpDg~~LaSgs 464 (474)
..+||+|+++.|+-.+
T Consensus 207 NGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 207 NGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCCEEEEEC
Confidence 8899999998877665
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.77 E-value=7.6e-07 Score=87.99 Aligned_cols=202 Identities=12% Similarity=0.052 Sum_probs=133.5
Q ss_pred eEEEEEc---CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeE--EEEEecCCCeEEEE-eCC
Q 011970 219 TMLYSIS---DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK--VDFIEQFNEKLLVK-QEN 292 (474)
Q Consensus 219 ~~l~tl~---~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~--V~F~~~~~~~ll~~-~~D 292 (474)
+.+.+++ ....+.+.|+++ .|..+. +.++.|+..|++||+.++++ .....+. +++ ++++|... -.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~-~Ly~st--G~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~---~g~~Ly~ltw~~ 115 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQG-HFFEST--GHQGTLRQLSLESAQPVWME--RLGNIFAEGLAS---DGERLYQLTWTE 115 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETT-EEEEEE--TTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEE---CSSCEEEEESSS
T ss_pred EEEEEEcCCCccccceEEEECC-EEEEEc--CCCCEEEEEECCCCcEEeEE--CCCCcceeEEEE---eCCEEEEEEccC
Confidence 4455565 246899999965 554443 45667999999999999888 3344444 553 46666665 478
Q ss_pred CcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCC
Q 011970 293 ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ 370 (474)
Q Consensus 293 ~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg 370 (474)
+.+.++|.++++.+.++... ...+.++ +||+.|..+. +++|.++|.+ .+.+.+++--....+-..+|.+.+. ||
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG 191 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG 191 (268)
T ss_dssp CEEEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC
Confidence 99999999999999876542 2334554 5666666666 8899999985 8888877642211110125667776 88
Q ss_pred CEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEE
Q 011970 371 DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITS 450 (474)
Q Consensus 371 ~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~s 450 (474)
++.|.... +.+|-+-|..||+.+++|.-....|. +. +......+....
T Consensus 192 ~lyanvw~-----------s~~I~vIDp~TG~V~~~Idl~~L~~~---~~------------------~~~~~~~~vlNG 239 (268)
T 3nok_A 192 VIYANIWH-----------SSDVLEIDPATGTVVGVIDASALTRA---VA------------------GQVTNPEAVLNG 239 (268)
T ss_dssp EEEEEETT-----------CSEEEEECTTTCBEEEEEECHHHHHH---HT------------------TTCCCTTCCEEE
T ss_pred EEEEEECC-----------CCeEEEEeCCCCcEEEEEECCCCccc---cc------------------ccccCcCCceEE
Confidence 87765433 67999999999999999965321000 00 000001126788
Q ss_pred EEEcCCCCEEEEEc
Q 011970 451 LFYDEERNEIYTGN 464 (474)
Q Consensus 451 lafSpDg~~LaSgs 464 (474)
+||+|+++.|+-.+
T Consensus 240 IA~dp~~~rlfVTG 253 (268)
T 3nok_A 240 IAVEPGSGRIFMTG 253 (268)
T ss_dssp EEECTTTCCEEEEE
T ss_pred EEEcCCCCEEEEeC
Confidence 99999988766554
No 256
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.72 E-value=0.0001 Score=81.04 Aligned_cols=314 Identities=11% Similarity=0.043 Sum_probs=191.1
Q ss_pred ccEEEEEee-ccEEEEeeCCCeEEeeeccccceeeEeec------CCCceEEEEEEeeCCCEEEEEEeecCCCccceeee
Q 011970 89 TKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNV------SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCR 161 (474)
Q Consensus 89 ~~V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~g------~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~ 161 (474)
..|.+|... +..|-.+..++-+..++..+++...+... -....|++|+..++|...|.. .+
T Consensus 163 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt-----~~------- 230 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGT-----SK------- 230 (781)
T ss_dssp CCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEE-----TT-------
T ss_pred cceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEe-----CC-------
Confidence 457888776 55566677664566788877765443211 123569999999999977642 22
Q ss_pred EEEEeEeccCCCCCccceeeec-------cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEE-----------
Q 011970 162 STKIEYIRRGKPDSGFALFESE-------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS----------- 223 (474)
Q Consensus 162 ~~~iw~i~~G~~~~~~~lf~~~-------~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~t----------- 223 (474)
.+.+++..++++.. +... ....+.++..+ ++|.+.+ |...+-+.++|.++++....
T Consensus 231 Gl~~~d~~~~~~~~----~~~~~~~~~~l~~~~i~~i~~d-~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~ 304 (781)
T 3v9f_A 231 GLALFNANTETFTN----FHNNPGNIHGALSSYIFSIKQL-KDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREG 304 (781)
T ss_dssp EEEEEETTTTEEEC---------------CCCCEEEEEEC-TTSEEEE-EESSSCEEEEETTCC---------CEEECBC
T ss_pred cHheECCCCCcEEE----EEcCCCccccccCceEEEEEEC-CCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCC
Confidence 34456655554311 1110 12346678886 6888766 44434477889887764321
Q ss_pred -----EcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEee----------cCcceeEEEEEecCCCeEEE
Q 011970 224 -----ISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH----------LLHRNKKVDFIEQFNEKLLV 288 (474)
Q Consensus 224 -----l~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~----------h~~~v~~V~F~~~~~~~ll~ 288 (474)
++.+.|.++...+++.|-++.. ++-|..++..++... .+.. ....|.++.. ..++.|.+
T Consensus 305 ~~~~~l~~~~v~~i~~D~~g~lWigt~---~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~--d~~g~lWi 378 (781)
T 3v9f_A 305 DNNYSLSNASARYIFQDSFNNIWIGTW---GGGINFISNAPPTFH-TWSYSPTQMNESSLSNKVVSSVCD--DGQGKLWI 378 (781)
T ss_dssp SSTTSBSSSCEEEEEECSSCCEEEEEB---SSCEEEECSSCCSCE-EEC----CCCSSCCSSSCEEEEEE--CTTSCEEE
T ss_pred CCCCCCCCCeEEEEEEeCCCCEEEEec---CCeEEEeCCCCCcce-eeccCccccccCCCCCcceEEEEE--cCCCCEEE
Confidence 2346799999987655655532 356888888765533 2211 1234666663 33578888
Q ss_pred EeCCCcEEEEECCCCceEEec---cccCCceEEEEEcCCCcEEEEEcCCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEE
Q 011970 289 KQENENLQILDVRNAELMEVS---RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIY 365 (474)
Q Consensus 289 ~~~D~tIkIWDv~tg~~~~~l---~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~G~ll~tl~gH~~~~~~~~v~sva 365 (474)
+.+++-|.++|..+++..... ......|.++...++|++.+...++-+-.+|.....++.+.... .+...|.+++
T Consensus 379 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~--~~~~~v~~i~ 456 (781)
T 3v9f_A 379 GTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEK--NELLDVRVFY 456 (781)
T ss_dssp EEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTT--TCCCCEEEEE
T ss_pred EeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCC--CCCCeEEEEE
Confidence 888888999998876543321 12345789998889999988655677888998633344443211 0112378999
Q ss_pred ECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccc
Q 011970 366 ITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEAL 445 (474)
Q Consensus 366 fSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 445 (474)
..++|++.+.. .+-|..+|..+++.......... . . ..
T Consensus 457 ~d~~g~lwigt-------------~~Gl~~~~~~~~~~~~~~~~~~~--~--~-------------------------~~ 494 (781)
T 3v9f_A 457 EDKNKKIWIGT-------------HAGVFVIDLASKKVIHHYDTSNS--Q--L-------------------------LE 494 (781)
T ss_dssp ECTTSEEEEEE-------------TTEEEEEESSSSSCCEEECTTTS--S--C-------------------------SC
T ss_pred ECCCCCEEEEE-------------CCceEEEeCCCCeEEecccCccc--c--c-------------------------cc
Confidence 99999988853 34588899888776443222110 0 0 00
Q ss_pred cCEEEEEEcCCCCEEEEEcCCCcEE
Q 011970 446 EDITSLFYDEERNEIYTGNRHGLVH 470 (474)
Q Consensus 446 ~~V~slafSpDg~~LaSgs~DgtVk 470 (474)
..|.+++.+++|+..+....+|..+
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~Gl~~ 519 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGGGVGI 519 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSSCEEE
T ss_pred ceeEEEEEcCCCCEEEEEcCCCEEE
Confidence 2789999999999877665566544
No 257
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.69 E-value=8.1e-06 Score=79.57 Aligned_cols=179 Identities=12% Similarity=0.053 Sum_probs=127.5
Q ss_pred EEEEeCCCCeEEEEecCC--CcEEEeecCCCeEEEEEc-CCcE--EEEEEcCCceEEEEecCCCCccEEEEecCCCeEEE
Q 011970 190 FVEFDDVNGKVLTYSAQD--SIYKVFDLKNYTMLYSIS-DKHV--QEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK 264 (474)
Q Consensus 190 ~V~Fs~~nGk~LaS~s~D--~tiKlWdl~tg~~l~tl~-~~~V--~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~ 264 (474)
.++|+ ++.+..|.+.+ +.|+..|+++|+.+.++. .... ..+++.. +.|.... -.++.+-++|.+|++.+.
T Consensus 25 GL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~lt--w~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 25 GLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLT--WRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp EEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEE--SSSSEEEEEETTTTEEEE
T ss_pred cEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEE--eeCCEEEEEECCcCcEEE
Confidence 58997 48888888876 499999999999998876 3333 3456654 4454443 336789999999999999
Q ss_pred EEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc--cC---CceEEEEEcCCCcEEEEEc-CCcEEE
Q 011970 265 VFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT--EF---MTPSAFIFLYENQLFLTFR-NRTVAV 338 (474)
Q Consensus 265 tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~--h~---~~v~sv~Fspdg~llaS~s-D~tIkl 338 (474)
+|.... .=+.++ +++++|.++..+++|.++|.++.+.+....- +. ..+..+.+. +|+++|... +..|.+
T Consensus 100 ti~~~~-~Gwglt---~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~v 174 (243)
T 3mbr_X 100 RFRYPG-EGWALT---SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIAR 174 (243)
T ss_dssp EEECSS-CCCEEE---ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EEeCCC-CceEEe---eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEE
Confidence 998432 225555 4678888886689999999999987765321 11 233344433 899998887 889999
Q ss_pred EeC-CCcEEEEeccCCCC--------cCCCCeeEEEECCCCCEEEEEec
Q 011970 339 WNF-RGELVTSFEDHLLW--------HPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 339 Wd~-~G~ll~tl~gH~~~--------~~~~~v~svafSpDg~~LaS~s~ 378 (474)
-|. +|+.+.++.-.... -.+...|.||+.|+++.|...++
T Consensus 175 IDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 175 IDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 999 59999877632110 01124689999999887776654
No 258
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.68 E-value=3.7e-06 Score=93.05 Aligned_cols=245 Identities=10% Similarity=0.058 Sum_probs=143.4
Q ss_pred eEEEEEEe-eCCCEEEEEEee-cCCCccceeeeEEEEeEeccC-CCCCccceeeeccccCceEEEEeCCCCeEEEEecCC
Q 011970 131 VIRSLFYN-KNNDSLITVSVY-ASDNFSSLKCRSTKIEYIRRG-KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD 207 (474)
Q Consensus 131 ~i~sv~fs-pdg~~Lis~S~~-~s~d~s~Lk~~~~~iw~i~~G-~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D 207 (474)
.+.+..|| |||+.||-++.. |++. .++.++++.+| +.... .++. . ...++|+ |||+.|++.+.|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~------~~l~v~dl~~g~~~l~~--~~~~--~--~~~~~Ws-pDg~~l~y~~~d 241 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEV------YTIEFKRISDPSQTIAD--KVSG--T--NGEIVWG-PDHTSLFYVTKD 241 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSC------EEEEEEETTCTTCCCCC--CEEE--E--CSCCEEC-SSTTEEEEEEEC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCce------EEEEEEECCCCCEeCCc--cccC--c--eeeEEEe-cCCCEEEEEEEC
Confidence 68899999 999999876653 3344 57889999998 74211 1111 1 2368898 799999988876
Q ss_pred -----CcEEEeecCCCe----EEEEEcC-CcEEEEEEcCCc-eEEEEecCCCCccEEEEecCCC--eE-EEEEe-ecCcc
Q 011970 208 -----SIYKVFDLKNYT----MLYSISD-KHVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDG--TV-LKVFY-HLLHR 272 (474)
Q Consensus 208 -----~tiKlWdl~tg~----~l~tl~~-~~V~~vafSpg~-~la~~s~~s~D~tIkLWdi~tG--~~-L~tl~-~h~~~ 272 (474)
..|.++++.+++ +++.-.+ ....++.+||++ .|+..+.......|.++|+.++ +. ++.+. .....
T Consensus 242 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 321 (751)
T 2xe4_A 242 ETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV 321 (751)
T ss_dssp TTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC
T ss_pred CCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc
Confidence 357888888764 3443332 456789999854 5555543334456899999886 33 13343 33345
Q ss_pred eeEEEEEecCCCeEEEEe-CC--C--cEEEEECCCC-ceEE-eccccCC-ceEEEEEcCCCcEEEEEc-CCcEEE--EeC
Q 011970 273 NKKVDFIEQFNEKLLVKQ-EN--E--NLQILDVRNA-ELME-VSRTEFM-TPSAFIFLYENQLFLTFR-NRTVAV--WNF 341 (474)
Q Consensus 273 v~~V~F~~~~~~~ll~~~-~D--~--tIkIWDv~tg-~~~~-~l~~h~~-~v~sv~Fspdg~llaS~s-D~tIkl--Wd~ 341 (474)
.++++|. +++.|+..+ .| + .|-.+|+.++ +... ++..... .+..+.+. ++.++++.. |+..+| +|+
T Consensus 322 ~~s~~~~--~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 322 RYDVQMH--GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp CEEEEEE--TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eEEEeee--eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 5666653 377777654 33 3 4555677653 3223 2222222 44555554 455666666 886554 553
Q ss_pred -------C-CcEEEEec--cCCCCcCCCCeeEEEE------CCCCC-EEEEEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 342 -------R-GELVTSFE--DHLLWHPDCNTNNIYI------TSDQD-LIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 342 -------~-G~ll~tl~--gH~~~~~~~~v~svaf------SpDg~-~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
. |+.++.+. +. ...+.| ++|++ ++++++. ...-.+|.+.|+.+|+.
T Consensus 399 ~~~~~~~~~g~~~~~l~l~~~--------~~~~~~~~~~~~~~~~~~l~~~~ss--------~~~P~~~~~~d~~~~~~- 461 (751)
T 2xe4_A 399 DSQDGVFKAGTGLREVVMEEP--------IFTVHLVESQMLEYEEPTFRMEYSS--------LATPNTWFDVSPQDHSR- 461 (751)
T ss_dssp CTTTSCCCTTTCCEECCCCCS--------SCEEEECGGGCCCTTCSCEEEEEEE--------TTEEEEEEEECTTTCCE-
T ss_pred ccccccccCCccceEECCCCc--------eeEEEeccCcccCCCCCEEEEEEeC--------CCCCCEEEEEECCCCcE-
Confidence 3 44133332 21 122445 45664 5555543 11235677888888763
Q ss_pred EEec
Q 011970 405 AKIN 408 (474)
Q Consensus 405 ~tl~ 408 (474)
..|.
T Consensus 462 ~~l~ 465 (751)
T 2xe4_A 462 TAVK 465 (751)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 3443
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.67 E-value=1.9e-05 Score=76.93 Aligned_cols=230 Identities=12% Similarity=0.058 Sum_probs=140.8
Q ss_pred cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCC
Q 011970 118 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 197 (474)
Q Consensus 118 g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~n 197 (474)
.+.+..+.. . .....++++|+|+.+++ . . .+ ..+..++ ..|+.. ..+.. -..|..++|+ ++
T Consensus 22 ~~~~~~~p~-~-~~pegia~~~~g~lyv~-d--~-~~------~~I~~~d-~~g~~~---~~~~~--~~~p~gia~~-~d 82 (306)
T 2p4o_A 22 AKIITSFPV-N-TFLENLASAPDGTIFVT-N--H-EV------GEIVSIT-PDGNQQ---IHATV--EGKVSGLAFT-SN 82 (306)
T ss_dssp EEEEEEECT-T-CCEEEEEECTTSCEEEE-E--T-TT------TEEEEEC-TTCCEE---EEEEC--SSEEEEEEEC-TT
T ss_pred ceEeEeCCC-C-CCcceEEECCCCCEEEE-e--C-CC------CeEEEEC-CCCceE---EEEeC--CCCceeEEEc-CC
Confidence 445555543 2 45788999999985554 1 1 22 3555555 344431 12222 2357789998 79
Q ss_pred CeEEEEecCCC--cEEEeecCCCeEEEEE--cC-CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeE-EEEEe----
Q 011970 198 GKVLTYSAQDS--IYKVFDLKNYTMLYSI--SD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV-LKVFY---- 267 (474)
Q Consensus 198 Gk~LaS~s~D~--tiKlWdl~tg~~l~tl--~~-~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~-L~tl~---- 267 (474)
|+++++..... .|-.+|..+|+..... .. ..-..+++.+++++++... ..+.|...|..+|+. +....
T Consensus 83 G~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~--~~g~i~~~d~~~~~~~v~~~~~~~~ 160 (306)
T 2p4o_A 83 GDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS--YRGAIWLIDVVQPSGSIWLEHPMLA 160 (306)
T ss_dssp SCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET--TTTEEEEEETTTTEEEEEEECGGGS
T ss_pred CcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC--CCCeEEEEeCCCCcEeEEEECCccc
Confidence 99877664432 3555677888754322 22 3345677777777766642 356788888776532 21111
Q ss_pred -----ecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCC-Cce--EEeccccCCceEEEEEcCCCcEEEEEc-CCcEE
Q 011970 268 -----HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRN-AEL--MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVA 337 (474)
Q Consensus 268 -----~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~t-g~~--~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIk 337 (474)
.....-..+ .++++.|.++ ...+.|..+|+.. |+. .+++. ....+..+++.++|+++++.. .+.|.
T Consensus 161 ~~~~~~~~~~pngi---s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~ 236 (306)
T 2p4o_A 161 RSNSESVFPAANGL---KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVV 236 (306)
T ss_dssp CSSTTCCSCSEEEE---EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEE
T ss_pred cccccCCCCcCCCc---CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEE
Confidence 111122344 3567777776 5788999999875 443 12221 124577899999999998887 88999
Q ss_pred EEeCCCcEEE--EeccCCCCcCCCCeeEEEEC---CCCCEEEEEe
Q 011970 338 VWNFRGELVT--SFEDHLLWHPDCNTNNIYIT---SDQDLIISYC 377 (474)
Q Consensus 338 lWd~~G~ll~--tl~gH~~~~~~~~v~svafS---pDg~~LaS~s 377 (474)
++|.+|++.. .+.....+ ..+++|. ||++.|...+
T Consensus 237 ~~~~~G~~~~~~~~~~~~~~-----p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 237 RIAPDRSTTIIAQAEQGVIG-----STAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EECTTCCEEEEECGGGTCTT-----EEEEEECCSTTTTTEEEEEE
T ss_pred EECCCCCEEEEeecccccCC-----ceEEEEecccCCCCEEEEEC
Confidence 9999898743 34332222 5799999 8987666554
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.66 E-value=3.7e-06 Score=83.07 Aligned_cols=179 Identities=11% Similarity=0.055 Sum_probs=128.6
Q ss_pred EEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCCc--EEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEe
Q 011970 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKH--VQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY 267 (474)
Q Consensus 190 ~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~--V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~ 267 (474)
.++|+ ++.+..+.+.++.|++.|+++|+.+.++-+.. -..+++..+ .|.... -.++.+.++|.+|++.+++|.
T Consensus 59 GL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~-~Ly~lt--w~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 59 GLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGE-RLYQLT--WTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSS-CEEEEE--SSSCEEEEEETTTTEEEEEEE
T ss_pred eEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCC-EEEEEE--ccCCEEEEEECCcCcEEEEEe
Confidence 58897 58999999999999999999999776653233 244777655 444443 336789999999999999998
Q ss_pred ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc--cC---CceEEEEEcCCCcEEEEEc-CCcEEEEeC
Q 011970 268 HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT--EF---MTPSAFIFLYENQLFLTFR-NRTVAVWNF 341 (474)
Q Consensus 268 ~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~--h~---~~v~sv~Fspdg~llaS~s-D~tIklWd~ 341 (474)
.- ..-+.++ ++++.|.++..+++|.++|.++.+.+....- +. ..+..+.|. +|+++|... +.+|.+=|.
T Consensus 134 ~~-~eGwGLt---~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 134 YS-GEGWGLC---YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp CS-SCCCCEE---EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred CC-CceeEEe---cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 42 2235666 4578888887799999999999988765321 11 234555665 889998887 889999999
Q ss_pred -CCcEEEEeccCCC--------CcCCCCeeEEEECCCCCEEEEEec
Q 011970 342 -RGELVTSFEDHLL--------WHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 342 -~G~ll~tl~gH~~--------~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
+|+.+.++.-... ...+...|.||+.|+++.|...++
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 4999887763210 001124689999998766665443
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.64 E-value=1.6e-05 Score=77.51 Aligned_cols=196 Identities=10% Similarity=0.007 Sum_probs=126.0
Q ss_pred cCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEE--E-EcC---CcEEEEEEcC-CceEEEEecC------------
Q 011970 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--S-ISD---KHVQEIKISP-GIMLLIFNRS------------ 246 (474)
Q Consensus 186 ~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~--t-l~~---~~V~~vafSp-g~~la~~s~~------------ 246 (474)
..|..++|++.+|++++..... -+..+|.++++... . ..+ .....|++.| ++.+.++...
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYY-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTT-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCC-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 3577899983378877765444 47888987665321 1 111 3578899999 7777666432
Q ss_pred ---CCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCc--eEEeccccCCceEEEE
Q 011970 247 ---SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAE--LMEVSRTEFMTPSAFI 320 (474)
Q Consensus 247 ---s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~--~~~~l~~h~~~v~sv~ 320 (474)
..++.|..+|..+|+....... ...-..|+|. +++..|.++ ..++.|..+|+.+.. ..+.+..... +..++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~-~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~ 235 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVS-ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIK 235 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEEC-TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEE
T ss_pred cccCCCceEEEEeCCCCEEEEeccC-CccCcceEEC-CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeE
Confidence 1236688899888876443332 2334568876 566667766 567899999987532 1122211122 88899
Q ss_pred EcCCCcEEEEEcC-----------CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCC
Q 011970 321 FLYENQLFLTFRN-----------RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGS 389 (474)
Q Consensus 321 Fspdg~llaS~sD-----------~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~ 389 (474)
+.++|++.++... +.|..+|.+|+.+..+........ ..+..+++ .+|++.++...
T Consensus 236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~-~~~~~~~~-~~g~L~v~~~~----------- 302 (322)
T 2fp8_A 236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAG-EHFEQIQE-HDGLLYIGTLF----------- 302 (322)
T ss_dssp ECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTT-SCCCEEEE-ETTEEEEECSS-----------
T ss_pred ECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCcc-ccceEEEE-eCCEEEEeecC-----------
Confidence 9999999888643 567788878999988875532100 11456766 57777776433
Q ss_pred CCeEEEEeC
Q 011970 390 AGSINVSSI 398 (474)
Q Consensus 390 DgtIklWdi 398 (474)
.+.|..+++
T Consensus 303 ~~~i~~~~~ 311 (322)
T 2fp8_A 303 HGSVGILVY 311 (322)
T ss_dssp CSEEEEEEC
T ss_pred CCceEEEec
Confidence 677888876
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.62 E-value=1.1e-05 Score=87.62 Aligned_cols=291 Identities=9% Similarity=-0.036 Sum_probs=159.8
Q ss_pred EEEEee-CCCEEEEEEeecCCCcc--ceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec-CCCc
Q 011970 134 SLFYNK-NNDSLITVSVYASDNFS--SLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA-QDSI 209 (474)
Q Consensus 134 sv~fsp-dg~~Lis~S~~~s~d~s--~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s-~D~t 209 (474)
++++.| +|+.++.++.+. +.|. .-....+.+||+.+++...- +.....+..+-..+++. +||++++.|+ .+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~-~~~~~~~~~~~~~~~yd~~t~~w~~~-~~~~~~~~~~~~~~~~~-~~g~lyv~GG~~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRN-DAFGGSPGGITLTSSWDPSTGIVSDR-TVTVTKHDMFCPGISMD-GNGQIVVTGGNDAKK 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCC-TTTCSCCCSEEEEEEECTTTCCBCCC-EEEECSCCCSSCEEEEC-TTSCEEEECSSSTTC
T ss_pred eEEEEecCCEEEEEecccc-cccccCCCCeEEEEEEeCCCCcEEeC-cccCCCCCCccccccCC-CCCCEEEeCCCCCCc
Confidence 667778 888888766432 1111 01123678899988886332 11211122232357886 7999999998 4568
Q ss_pred EEEeecCCCeEEE--EEcC-CcEEEEEEcC-CceEEEEecCCC---CccEEEEecCCCeEEEEE----ee-cCcceeEEE
Q 011970 210 YKVFDLKNYTMLY--SISD-KHVQEIKISP-GIMLLIFNRSSS---HVPLKILSIEDGTVLKVF----YH-LLHRNKKVD 277 (474)
Q Consensus 210 iKlWdl~tg~~l~--tl~~-~~V~~vafSp-g~~la~~s~~s~---D~tIkLWdi~tG~~L~tl----~~-h~~~v~~V~ 277 (474)
+.+||..+.+-.. .++. ..-.++++.| |.++++++.... -.++.+||.++++....- .. ...+...+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~- 345 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGL- 345 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGG-
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccce-
Confidence 9999998876432 2222 1223455664 555444431111 146999999998754320 00 00000000
Q ss_pred EEecCCCeEEEEeC---------CCcEEEEECCCCceEEeccccC---------CceEEEEEc-CCCcEEEEEc-CC---
Q 011970 278 FIEQFNEKLLVKQE---------NENLQILDVRNAELMEVSRTEF---------MTPSAFIFL-YENQLFLTFR-NR--- 334 (474)
Q Consensus 278 F~~~~~~~ll~~~~---------D~tIkIWDv~tg~~~~~l~~h~---------~~v~sv~Fs-pdg~llaS~s-D~--- 334 (474)
+ ..++..++.++. ...+..||..+.........+. ..-.++.|. .++++++.|+ +.
T Consensus 346 ~-~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~ 424 (656)
T 1k3i_A 346 Y-RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD 424 (656)
T ss_dssp G-TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS
T ss_pred e-ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC
Confidence 0 012223334433 4567899999887554332221 133566665 5899999886 43
Q ss_pred --------cEEEEeCC-CcEEEEe--ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 335 --------TVAVWNFR-GELVTSF--EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 335 --------tIklWd~~-G~ll~tl--~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
+|.+||.. ++..... .-+... . --+.++.|||++++.|+......--....-.++.+||..+++.
T Consensus 425 ~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R---~-~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W 500 (656)
T 1k3i_A 425 SDATTNAHIITLGEPGTSPNTVFASNGLYFAR---T-FHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF 500 (656)
T ss_dssp SBCCCCEEEEECCSTTSCCEEEECTTCCSSCC---B-SCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE
T ss_pred CCcCCcceEEEcCCCCCCCeeEEccCCCCCCc---c-cCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCce
Confidence 78889985 5543332 112211 1 1345678999999998752110000001136789999988765
Q ss_pred EEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcC
Q 011970 404 LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR 465 (474)
Q Consensus 404 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~ 465 (474)
.. +.... . ++. ...+..+.|||+.|+.|+.
T Consensus 501 ~~-~~~~~---~-----~R~-----------------------~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 501 YK-QNPNS---I-----VRV-----------------------YHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EE-CCCCS---S-----CCC-----------------------TTEEEEECTTSCEEEEECC
T ss_pred ee-cCCCC---C-----ccc-----------------------cccHhhcCCCcEEEecCCC
Confidence 43 22111 0 000 2234667899999999985
No 263
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.60 E-value=9.8e-06 Score=85.63 Aligned_cols=241 Identities=10% Similarity=0.037 Sum_probs=143.1
Q ss_pred ccEEEEeeCCCeEEeeecccc----ceeeEeec------CCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeE
Q 011970 98 RDIVFALAHSGVCAAFSRETN----RRICFLNV------SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEY 167 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg----~~l~~l~g------~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~ 167 (474)
..+++++..+.+|.++|..+. +..+++.. .....=..+..+||| .+|++..+. +. ..+ ..+-+-|
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~-~g--~~~-g~v~vlD 170 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNE-EG--EGP-GGILMLD 170 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEET-TS--CSC-CEEEEEC
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCc-CC--CCC-CeEEEEE
Confidence 366788889999999999887 77777730 001123567889999 777655331 10 011 3566777
Q ss_pred eccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec-------------------CCCcEEEeecCCCeEEEEEcC--
Q 011970 168 IRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA-------------------QDSIYKVFDLKNYTMLYSISD-- 226 (474)
Q Consensus 168 i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s-------------------~D~tiKlWdl~tg~~l~tl~~-- 226 (474)
..+++.....+.=. ........+-|+ |+++++.++. .+.+|.+||+.+++.+.++.-
T Consensus 171 ~~T~~v~~~~~~~~-~~~~~~Yd~~~~-p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 171 HYSFEPLGKWEIDR-GDQYLAYDFWWN-LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp TTTCCEEEECCSBC-TTCCCCCCEEEE-TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred CCCCeEEEEEccCC-CCccccceEEEC-CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 77777643222100 011111147788 7999888875 378999999999999988873
Q ss_pred --CcEEEEEE--cCCceEEEEecCC-----CCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEE
Q 011970 227 --KHVQEIKI--SPGIMLLIFNRSS-----SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQI 297 (474)
Q Consensus 227 --~~V~~vaf--Spg~~la~~s~~s-----~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkI 297 (474)
..-.+|+| +|++..+-... . .+.+|-+|....|+. + .+++
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~-e~~~~~Lss~V~v~~~d~g~~----~--------------------------~~~v 297 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINM-VVSLKDLSSSIWLWFYEDGKW----N--------------------------AEKV 297 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEE-EEETTTCCEEEEEEEEETTEE----E--------------------------EEEE
T ss_pred CCCccceeEeeECCCCCEEEEEE-eeeccCCCceEEEEEecCCce----e--------------------------EEEE
Confidence 24567877 88654433211 1 235666655444321 1 1122
Q ss_pred EECCCCceEEec-------cccCCceEEEEEcCCCcEEEEEc--CCcEEEEeCC--C--cEEEEeccCCC---------C
Q 011970 298 LDVRNAELMEVS-------RTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR--G--ELVTSFEDHLL---------W 355 (474)
Q Consensus 298 WDv~tg~~~~~l-------~~h~~~v~sv~Fspdg~llaS~s--D~tIklWd~~--G--~ll~tl~gH~~---------~ 355 (474)
.|+.+.+...++ .+-...+..+.+||||++|-.+. .++|.++|+. + +++..+.-... .
T Consensus 298 Idi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~ 377 (462)
T 2ece_A 298 IEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGH 377 (462)
T ss_dssp EEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSC
T ss_pred EeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccc
Confidence 222222111111 11123578899999999887775 8899999983 3 45554432100 0
Q ss_pred -cCCCCeeEEEECCCCCEEEEEe
Q 011970 356 -HPDCNTNNIYITSDQDLIISYC 377 (474)
Q Consensus 356 -~~~~~v~svafSpDg~~LaS~s 377 (474)
.... =..+++||||++|..+.
T Consensus 378 ~~~gg-Pr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 378 KLTGA-PQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCSC-CCCEEECTTSSEEEEEC
T ss_pred cCCCC-CCEEEEcCCCCEEEEEc
Confidence 0000 15799999999999876
No 264
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.58 E-value=1.5e-05 Score=86.42 Aligned_cols=266 Identities=8% Similarity=-0.031 Sum_probs=152.4
Q ss_pred eccEEEEeeCCC-----------eEEeeeccccc--eeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEE
Q 011970 97 ARDIVFALAHSG-----------VCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 163 (474)
Q Consensus 97 s~~~las~s~dg-----------tiklW~~~tg~--~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~ 163 (474)
.+++++.|+.+. .+.+||..+++ .+..+...+.....++++.+||+.++.++. ++ ..+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~---~~------~~v 267 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN---DA------KKT 267 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSS---ST------TCE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCC---CC------Cce
Confidence 377888876543 68899999886 344554434344456888999998887432 22 257
Q ss_pred EEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec-CC-----CcEEEeecCCCeEEEE-------EcCCcEE
Q 011970 164 KIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA-QD-----SIYKVFDLKNYTMLYS-------ISDKHVQ 230 (474)
Q Consensus 164 ~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s-~D-----~tiKlWdl~tg~~l~t-------l~~~~V~ 230 (474)
.++|..+++....-++-. -++-..+++. +||++++.|+ .+ .++.+||.++.+-... +.... .
T Consensus 268 ~~yd~~t~~W~~~~~~~~---~R~~~s~~~~-~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-~ 342 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQV---ARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-K 342 (656)
T ss_dssp EEEEGGGTEEEECCCCSS---CCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-T
T ss_pred EEecCcCCceeECCCCCc---cccccceEEe-cCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc-c
Confidence 788887776422111111 1121245554 5999999999 44 5799999988774332 00000 0
Q ss_pred EEEEcC-CceEEEEecC------CCCccEEEEecCCCeEEEEEeecCc---------ceeEEEEEecCCCeEEEEeCCC-
Q 011970 231 EIKISP-GIMLLIFNRS------SSHVPLKILSIEDGTVLKVFYHLLH---------RNKKVDFIEQFNEKLLVKQENE- 293 (474)
Q Consensus 231 ~vafSp-g~~la~~s~~------s~D~tIkLWdi~tG~~L~tl~~h~~---------~v~~V~F~~~~~~~ll~~~~D~- 293 (474)
..++.. +..++....+ .....+..||.++.+.......+.. .-..|.|...++..+++|+.++
T Consensus 343 ~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 343 QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 001111 2222222111 1234689999998876655443211 1244555333344444466432
Q ss_pred ----------cEEEEECCCCceEEec--cccCCce-EEEEEcCCCcEEEEEc-C-----------CcEEEEeCCCcEEEE
Q 011970 294 ----------NLQILDVRNAELMEVS--RTEFMTP-SAFIFLYENQLFLTFR-N-----------RTVAVWNFRGELVTS 348 (474)
Q Consensus 294 ----------tIkIWDv~tg~~~~~l--~~h~~~v-~sv~Fspdg~llaS~s-D-----------~tIklWd~~G~ll~t 348 (474)
.|.+||..+.+..+.. .-..... .+.+..|||++++.++ + .++.+||.....-..
T Consensus 423 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~ 502 (656)
T 1k3i_A 423 QDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK 502 (656)
T ss_dssp SSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE
T ss_pred CCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee
Confidence 7889999988876654 2122222 2346789999999987 5 578999985333223
Q ss_pred eccCCCCcCCCCeeEEEECCCCCEEEEEec
Q 011970 349 FEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 349 l~gH~~~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
+..-. ++........+.|||++++.|+.
T Consensus 503 ~~~~~--~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 503 QNPNS--IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCCS--SCCCTTEEEEECTTSCEEEEECC
T ss_pred cCCCC--CccccccHhhcCCCcEEEecCCC
Confidence 32111 11112234567899999999974
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.57 E-value=5.4e-05 Score=77.10 Aligned_cols=206 Identities=13% Similarity=0.138 Sum_probs=140.0
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 261 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~--~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~ 261 (474)
+.+|..|+|++.+|.+..+....+.|..+++.++.....+.. .....+++.+ ++.|..+. .....|.+.++.. +
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d--~~~~~I~~~~~dg-~ 191 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD--SGTSRIEVANLDG-A 191 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEE--TTTTEEEECBTTS-C
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEc--CCCCeEEEEeCCC-C
Confidence 567889999976888888888889999999876654333332 3456799996 66666553 3356788888754 4
Q ss_pred EEEEE-eecCcceeEEEEEecCCCeEEEEe-CC-CcEEEEECCCCceEEeccccCCceEEEEEcC-CCcEEEEEc-CCcE
Q 011970 262 VLKVF-YHLLHRNKKVDFIEQFNEKLLVKQ-EN-ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTV 336 (474)
Q Consensus 262 ~L~tl-~~h~~~v~~V~F~~~~~~~ll~~~-~D-~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s-D~tI 336 (474)
...++ ......-..+++. |.++.|..+. .+ +.|...|+...............+..++|+| +++++.+-+ .+.|
T Consensus 192 ~~~~l~~~~l~~P~giavd-p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALH-PMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp SCEEEECSSCSCEEEEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred ceEEeecCCCCCCcEEEEE-cCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 33333 3334555778876 5567777764 44 7888889775544444445566899999996 566667766 8899
Q ss_pred EEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 337 AVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 337 klWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
...|++|.-.+++-.....+ -.+|++ .++.+..+-.. .+.|...|..+|+.+.++...
T Consensus 271 ~~~d~dG~~~~~~~~~~~~~----P~giav-~~~~ly~td~~-----------~~~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 271 ERANLDGSHRKAVISQGLPH----PFAITV-FEDSLYWTDWH-----------TKSINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp EEECTTSCSCEEEECSSCSS----EEEEEE-ETTEEEEEETT-----------TTEEEEEETTTCCSCEEEECS
T ss_pred EEEeCCCCeeEEEEECCCCC----ceEEEE-ECCEEEEeeCC-----------CCeEEEEECCCCcceEEEccC
Confidence 99999876444443222223 367888 45555555432 788999997799988888653
No 266
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.52 E-value=5.4e-05 Score=78.48 Aligned_cols=257 Identities=10% Similarity=0.077 Sum_probs=148.4
Q ss_pred cccCceEEEEeC-CCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcC-CceEEEEecCCCC-ccEEEEecCC
Q 011970 184 SLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISP-GIMLLIFNRSSSH-VPLKILSIED 259 (474)
Q Consensus 184 ~~~~~~~V~Fs~-~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSp-g~~la~~s~~s~D-~tIkLWdi~t 259 (474)
.+..|..|+|+| .+|.+.++... +.|+.+|+++++....+. ...-..|+|+| |.+|.++...+.. ...-+|-..+
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 367888999983 24665555444 889999998877554444 35688999997 5546666432211 1122333344
Q ss_pred CeEE--EEEeecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEec-cccCCceEEEEEcCCCc-EEEEEc-C
Q 011970 260 GTVL--KVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVS-RTEFMTPSAFIFLYENQ-LFLTFR-N 333 (474)
Q Consensus 260 G~~L--~tl~~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l-~~h~~~v~sv~Fspdg~-llaS~s-D 333 (474)
|... ..+.. ..+...+++. |+++.|.++ ..++.|..+|..+++..... .+....+..++|+|+|+ ++++-. +
T Consensus 214 g~~~~~~~l~~-~~~p~giavd-p~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 214 SGFKVITELTK-GQNCNGAETH-PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp GTSCSEEEEEE-CSSCCCEEEC-TTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred Cceeeeeeecc-CCCceEEEEe-CCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 4332 33332 2345667765 545666665 47789999999887763332 22235789999999999 677766 8
Q ss_pred CcEEEEeCCC---cE--EEEeccC---CCCcCC-------CCee-EEEEC--------CCCCEEEEEecCCCccccccCC
Q 011970 334 RTVAVWNFRG---EL--VTSFEDH---LLWHPD-------CNTN-NIYIT--------SDQDLIISYCKAEPEDQWMEGS 389 (474)
Q Consensus 334 ~tIklWd~~G---~l--l~tl~gH---~~~~~~-------~~v~-svafS--------pDg~~LaS~s~~~~~~~~~~s~ 389 (474)
+.|..++.+| ++ +.++.+. ..+... ..-. .+++. ++|.+.++=..
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~----------- 360 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE----------- 360 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG-----------
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC-----------
Confidence 8999988754 22 3344432 111000 0012 45553 45777776433
Q ss_pred CCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCC-CCEEEEEcCCCc
Q 011970 390 AGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEE-RNEIYTGNRHGL 468 (474)
Q Consensus 390 DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpD-g~~LaSgs~Dgt 468 (474)
.+.|+.+| .+|+. .++-+... .+. .| +. +........|..-+.|+++|+ |..+++-...+.
T Consensus 361 n~~I~~i~-~~G~v-~~~~g~g~--~~~-------~G---~~----dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r 422 (430)
T 3tc9_A 361 NHCIRILT-PQGRV-TTFAGRGS--NGT-------SG---YN----DGDLRQEARFNHPEGIVYDEERECFFIGDRENRR 422 (430)
T ss_dssp GTEEEEEC-TTSEE-EEEEECCT--TSS-------SS---CB----CEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE
T ss_pred CcEEEEEC-CCCcE-EEEEeCCC--CCC-------Cc---cc----CCCchhhcEeCCCcEEEEECCCCEEEEEECCCCe
Confidence 57899988 57854 44444310 000 00 00 000001112446789999995 666666666677
Q ss_pred EEEc
Q 011970 469 VHVW 472 (474)
Q Consensus 469 VklW 472 (474)
|+..
T Consensus 423 Ir~i 426 (430)
T 3tc9_A 423 IRKI 426 (430)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.51 E-value=5.9e-05 Score=75.76 Aligned_cols=206 Identities=14% Similarity=0.142 Sum_probs=139.0
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 261 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~--~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~ 261 (474)
+..|..|+|++.++.+..+....+.|..+++.++.....+.. .....+++.+ ++.|..+. .....|.+.++. |+
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d--~~~~~I~~~~~d-G~ 148 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD--SGTSRIEVANLD-GA 148 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE--TTTTEEEEEETT-SC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEc--CCCCeEEEEcCC-CC
Confidence 456778999977888888888889999999876654333332 3567899996 66666553 335689999975 44
Q ss_pred EEEEEe-ecCcceeEEEEEecCCCeEEEEe-CC-CcEEEEECCCCceEEeccccCCceEEEEEcC-CCcEEEEEc-CCcE
Q 011970 262 VLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ-EN-ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTV 336 (474)
Q Consensus 262 ~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~-~D-~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s-D~tI 336 (474)
...++. .....-..+++. |.++.|..+. .+ +.|...|+...............+..++|+| +++++.+-+ .+.|
T Consensus 149 ~~~~l~~~~l~~P~~iavd-p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 149 HRKVLLWQSLEKPRAIALH-PMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp SCEEEECTTCSCEEEEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEeCCCCCcceEEEe-cCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 434433 334455788876 5567777764 44 7888888765444333344567899999996 566677766 8899
Q ss_pred EEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 337 AVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 337 klWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
...|++|.-.+++-.....+ -.+|++ .++.+..+-.. .+.|...|-.+|+.+.++...
T Consensus 228 ~~~~~dG~~~~~~~~~~~~~----P~giav-~~~~ly~td~~-----------~~~V~~~~~~~G~~~~~i~~~ 285 (349)
T 3v64_C 228 ERANLDGSHRKAVISQGLPH----PFAITV-FEDSLYWTDWH-----------TKSINSANKFTGKNQEIIRNK 285 (349)
T ss_dssp EEEETTSCSCEEEECSSCSS----EEEEEE-ETTEEEEEETT-----------TTEEEEEETTTCCSCEEEECS
T ss_pred EEEeCCCCceEEEEeCCCCC----ceEEEE-ECCEEEEecCC-----------CCeEEEEEccCCCccEEeccC
Confidence 99999876544433222222 367888 45555555332 688888887789888887643
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.49 E-value=7.8e-05 Score=77.51 Aligned_cols=257 Identities=10% Similarity=0.072 Sum_probs=150.8
Q ss_pred cccCceEEEEeCC--CCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEecCCCC-c-cEEEEecC
Q 011970 184 SLKWPGFVEFDDV--NGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSH-V-PLKILSIE 258 (474)
Q Consensus 184 ~~~~~~~V~Fs~~--nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~~la~~s~~s~D-~-tIkLWdi~ 258 (474)
.+..|..|+|++. +|.+.++-.. +.|+.+|+++++....+. ......|+|+|++.|.++...... . .+-..+..
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 4678889999831 4777766554 899999998888655444 356899999985546655432111 1 12222322
Q ss_pred CCeE-EEEEeecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEec--cccCCceEEEEEcCCCc-EEEEEc-
Q 011970 259 DGTV-LKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVS--RTEFMTPSAFIFLYENQ-LFLTFR- 332 (474)
Q Consensus 259 tG~~-L~tl~~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l--~~h~~~v~sv~Fspdg~-llaS~s- 332 (474)
.+.. -..+.. ...-..+++. +.++.|.++ ..++.|+.+|..+|+....+ .+.......++|+|+|+ ++++-.
T Consensus 216 ~~~~~~~~~~~-~~~P~giavd-~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 216 SGFTERLSLCN-ARGAKTCAVH-PQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GTTCCEEEEEE-CSSBCCCEEC-TTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCeeccccccc-cCCCCEEEEe-CCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 2211 012221 2333556664 435666665 47789999999888773322 12223455799999998 777777
Q ss_pred CCcEEEEeCC---CcE--EEEeccCC---CCcC-------CCCeeEEEE---------CCCCCEEEEEecCCCccccccC
Q 011970 333 NRTVAVWNFR---GEL--VTSFEDHL---LWHP-------DCNTNNIYI---------TSDQDLIISYCKAEPEDQWMEG 388 (474)
Q Consensus 333 D~tIklWd~~---G~l--l~tl~gH~---~~~~-------~~~v~svaf---------SpDg~~LaS~s~~~~~~~~~~s 388 (474)
++.|..++.+ |++ ..++.+.. .+.. -..-..++| .++|.+.++-..
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~---------- 363 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD---------- 363 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT----------
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC----------
Confidence 8899998874 332 23444331 1100 001256999 888988887433
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCCC-CCCccccCCCCCCccccccccccccccccccccCEEEEEEc-CCCCEEEEEcCC
Q 011970 389 SAGSINVSSILTGKCLAKINATNCS-PKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD-EERNEIYTGNRH 466 (474)
Q Consensus 389 ~DgtIklWdi~tG~cl~tl~gH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafS-pDg~~LaSgs~D 466 (474)
.+.|+..+ .+|+ +.++-|.... ..+. .+........|..-++|+++ ++|..+++=...
T Consensus 364 -n~~I~~~~-~~G~-v~t~~G~g~~~~~G~-----------------~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n 423 (433)
T 4hw6_A 364 -SHTVRVLT-PEGR-VTTYAGRGNSREWGY-----------------VDGELRSQALFNHPTSIAYDMKRKCFYIGDCDN 423 (433)
T ss_dssp -TTEEEEEC-TTSE-EEEEECCCTTCSSCC-----------------BCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred -CCEEEEEC-CCCC-EEEEEeCCCCCcccc-----------------CCCccccccEeCCCcEEEEECCCCEEEEEeCCC
Confidence 68899998 4785 4455543210 0000 00000001224467899999 777777776677
Q ss_pred CcEEEcc
Q 011970 467 GLVHVWS 473 (474)
Q Consensus 467 gtVklWd 473 (474)
+.|+..+
T Consensus 424 ~rIr~i~ 430 (433)
T 4hw6_A 424 HRVRKIA 430 (433)
T ss_dssp TEEEEEE
T ss_pred CEEEEEe
Confidence 7777653
No 269
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.47 E-value=1.7e-05 Score=85.37 Aligned_cols=244 Identities=9% Similarity=0.022 Sum_probs=146.7
Q ss_pred EEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCCc---EEEEEEcC---CceEEEEecCC---CCccEEEEecCCCe
Q 011970 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKH---VQEIKISP---GIMLLIFNRSS---SHVPLKILSIEDGT 261 (474)
Q Consensus 191 V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~---V~~vafSp---g~~la~~s~~s---~D~tIkLWdi~tG~ 261 (474)
++.. +|+++ .++.|+.+..+|.+||+.+.+..... -..+.-+| ++++++..... .++.|.-+|.+||+
T Consensus 111 ~~~~--~~~v~-v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 111 LAYG--AGQIV-KKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp CEEE--TTEEE-EECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred cEEE--CCEEE-EEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCc
Confidence 4554 56544 45679999999999999987764210 00111123 56666553221 16789999999999
Q ss_pred EEEEEeecCcc-------------------------------------e-eEEEEEecCCCeEEEEeC------------
Q 011970 262 VLKVFYHLLHR-------------------------------------N-KKVDFIEQFNEKLLVKQE------------ 291 (474)
Q Consensus 262 ~L~tl~~h~~~-------------------------------------v-~~V~F~~~~~~~ll~~~~------------ 291 (474)
.+-++...... + ..+++. +..+.+..+..
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d-~~~g~vy~~~g~~~~~~~~~~~g 266 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYD-PKLNLFYYGSGNPAPWNETMRPG 266 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEE-TTTTEEEEECCCCSCSCGGGSCS
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEc-CCCCeEEEECCCCccccCCccCC
Confidence 99888632110 0 123433 34566666542
Q ss_pred C----CcEEEEECCCCceEEecc--ccCC-------ceEEEEEcCCCc---EEEEEc-CCcEEEEeC-CCcEEEEeccC-
Q 011970 292 N----ENLQILDVRNAELMEVSR--TEFM-------TPSAFIFLYENQ---LFLTFR-NRTVAVWNF-RGELVTSFEDH- 352 (474)
Q Consensus 292 D----~tIkIWDv~tg~~~~~l~--~h~~-------~v~sv~Fspdg~---llaS~s-D~tIklWd~-~G~ll~tl~gH- 352 (474)
| +.|..+|.++|+.+-... +|.. .+.-+...+||+ +++.++ ++.+.+.|. +|+++..++-.
T Consensus 267 d~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~ 346 (571)
T 2ad6_A 267 DNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDP 346 (571)
T ss_dssp CCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred CceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccC
Confidence 2 369999999999875432 2321 222222335784 667777 999999998 59988765421
Q ss_pred -CCCcC------C-------------------C-------CeeEEEECCCCCEEEEEecCC-----------Cccc-ccc
Q 011970 353 -LLWHP------D-------------------C-------NTNNIYITSDQDLIISYCKAE-----------PEDQ-WME 387 (474)
Q Consensus 353 -~~~~~------~-------------------~-------~v~svafSpDg~~LaS~s~~~-----------~~~~-~~~ 387 (474)
..|.. . | +=..++|+|+..++...+..- .+.+ ..+
T Consensus 347 ~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g 426 (571)
T 2ad6_A 347 AVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVG 426 (571)
T ss_dssp TCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred CccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccc
Confidence 11100 0 0 002468899988887764310 0000 000
Q ss_pred --------------CCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEE
Q 011970 388 --------------GSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFY 453 (474)
Q Consensus 388 --------------s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slaf 453 (474)
..++.|..||+.||+.+.+++... .+.+..+
T Consensus 427 ~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-----------------------------------~~~~~~~ 471 (571)
T 2ad6_A 427 ATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-----------------------------------AAWGGTL 471 (571)
T ss_dssp EEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-----------------------------------CCCSBCE
T ss_pred ccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-----------------------------------CccceeE
Confidence 246899999999999998875432 1122223
Q ss_pred cCCCCEEEEEcCCCcEEEcc
Q 011970 454 DEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 454 SpDg~~LaSgs~DgtVklWd 473 (474)
...+..++.|+.|+.|+.||
T Consensus 472 ~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 472 YTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp EETTTEEEEECTTSEEEEEE
T ss_pred EECCCEEEEEcCCCeEEEEE
Confidence 34566778888999998887
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.43 E-value=0.00027 Score=73.22 Aligned_cols=235 Identities=12% Similarity=0.115 Sum_probs=144.2
Q ss_pred EEEee---ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEec
Q 011970 93 EIVAA---RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR 169 (474)
Q Consensus 93 ~i~~s---~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~ 169 (474)
.|++. +..|+.....+.|+.++.++++ +.++.. ....-+.|+|+|+|+.|..+...+... ...-++..+
T Consensus 141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~-v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~------~~~v~~~~~ 212 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEY-VSTVYS-GLSKVRTICWTHEADSMIITNDQNNND------RPNNYILTR 212 (430)
T ss_dssp EEEEETTEEEEEEEEEBTEEEEEEETTTTE-EEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTT------SEEEEEEEG
T ss_pred EEEECCCCCCeEEEEeCCCcEEEEECCCCE-EEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcc------cceEEEEeC
Confidence 44554 3556666555889999987555 445543 345579999999999666543211111 222344446
Q ss_pred cCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEE--EEEcC-CcEEEEEEcCCce-EEEEec
Q 011970 170 RGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML--YSISD-KHVQEIKISPGIM-LLIFNR 245 (474)
Q Consensus 170 ~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l--~tl~~-~~V~~vafSpg~~-la~~s~ 245 (474)
.|.+.... .+. .+.+|..++++|.+|.++++...++.|..+|+.++... ..+.. .+-..|+|+|++. |..+.
T Consensus 213 ~g~~~~~~-~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d- 288 (430)
T 3tc9_A 213 ESGFKVIT-ELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV- 288 (430)
T ss_dssp GGTSCSEE-EEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE-
T ss_pred CCceeeee-eec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE-
Confidence 77653211 122 25678899998438998888878889999999877652 22322 3567899998554 66654
Q ss_pred CCCCccEEEEecC--CCeE--EEEEeecC---------------ccee-EEEEEec------CCCeEEEE-eCCCcEEEE
Q 011970 246 SSSHVPLKILSIE--DGTV--LKVFYHLL---------------HRNK-KVDFIEQ------FNEKLLVK-QENENLQIL 298 (474)
Q Consensus 246 ~s~D~tIkLWdi~--tG~~--L~tl~~h~---------------~~v~-~V~F~~~------~~~~ll~~-~~D~tIkIW 298 (474)
...+.|..++.. +|+. +.++.+.. ..-. .++..+. ..+.|.++ ..++.|+.+
T Consensus 289 -~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i 367 (430)
T 3tc9_A 289 -VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRIL 367 (430)
T ss_dssp -TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEE
T ss_pred -CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEE
Confidence 335678887654 3443 33443320 0111 2332210 12456665 477899999
Q ss_pred ECCCCceEEeccc-----------------cCCceEEEEEcC-CCcEEEEEc-CCcEEEEeC
Q 011970 299 DVRNAELMEVSRT-----------------EFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNF 341 (474)
Q Consensus 299 Dv~tg~~~~~l~~-----------------h~~~v~sv~Fsp-dg~llaS~s-D~tIklWd~ 341 (474)
| .+|+....... .+..|+.|++.| +|.++++-. ++.|+..+.
T Consensus 368 ~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 368 T-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp C-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred C-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 9 56765443211 245799999999 688888877 788887765
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.40 E-value=0.00038 Score=70.77 Aligned_cols=228 Identities=12% Similarity=0.097 Sum_probs=150.5
Q ss_pred CCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccc
Q 011970 106 HSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESL 185 (474)
Q Consensus 106 ~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~ 185 (474)
....|+..++..++....+.+ ......|+|.+.++.|.-+. ... +.|..+++..+.. . .+... .+
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D--~~~-------~~I~r~~~~g~~~-~--~~~~~-~~ 158 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSD--VTL-------DRILRANLNGSNV-E--EVVST-GL 158 (386)
T ss_dssp CBSCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEE--TTT-------TEEEEEETTSCCE-E--EEECS-SC
T ss_pred cCccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEe--CCC-------CcEEEEecCCCCc-E--EEEeC-CC
Confidence 345677778775554444443 34578999998777665432 222 3555566443332 1 12222 35
Q ss_pred cCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeE
Q 011970 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTV 262 (474)
Q Consensus 186 ~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~--~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~ 262 (474)
..|..+++++.+|.+..+-...+.|.+.++........+.. ..-..|++.| ++.|..+... ....|...++ +|+.
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~-~~~~I~r~~~-dG~~ 236 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG-NTPRIEASSM-DGSG 236 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS-SSCEEEEEET-TSCS
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC-CCCEEEEEeC-CCCC
Confidence 56778999866788888888888999999864433222332 4678999997 6666655432 1256877886 4555
Q ss_pred EEEEe-ecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEE
Q 011970 263 LKVFY-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVW 339 (474)
Q Consensus 263 L~tl~-~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklW 339 (474)
...+. .....-..|+|. +++++|..+ ...+.|..+|+.......+.......+..+++ .++.++.+-. .+.|...
T Consensus 237 ~~~~~~~~~~~PnGlavd-~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~ 314 (386)
T 3v65_B 237 RRIIADTHLFWPNGLTID-YAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSA 314 (386)
T ss_dssp CEEEECSSCSCEEEEEEE-GGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEE
T ss_pred cEEEEECCCCCeeeEEEe-CCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEE
Confidence 44443 334456789987 456777776 57789999998765554455555668899999 7788888887 8899999
Q ss_pred eC-CCcEEEEeccC
Q 011970 340 NF-RGELVTSFEDH 352 (474)
Q Consensus 340 d~-~G~ll~tl~gH 352 (474)
|. +|+.++++...
T Consensus 315 ~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 315 NKFTGKNQEIIRNK 328 (386)
T ss_dssp ETTTCCSCEEEECS
T ss_pred ECCCCcceEEEccC
Confidence 94 78888777654
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.39 E-value=0.00041 Score=68.31 Aligned_cols=183 Identities=9% Similarity=0.016 Sum_probs=121.7
Q ss_pred CCcEEEeecCCCeEEEEEc-CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCC---CeEEEE-EeecCcceeEEEEEe
Q 011970 207 DSIYKVFDLKNYTMLYSIS-DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIED---GTVLKV-FYHLLHRNKKVDFIE 280 (474)
Q Consensus 207 D~tiKlWdl~tg~~l~tl~-~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~t---G~~L~t-l~~h~~~v~~V~F~~ 280 (474)
...|+.-|+.+++....+. .....+++|++ ++.|..+. ...+.|..+++.+ |....+ +.........+++.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D--~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd- 85 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD- 85 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEE--TTTTEEEEEEC--------CEEEECSSCSCCCEEEEE-
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEE--CCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe-
Confidence 3568888998877655555 36788999996 67777664 3357899999865 233333 33223455778875
Q ss_pred cCCCeEEEE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcC-CCcEEEEEc-C-CcEEEEeCCCcEEEEeccCCCCc
Q 011970 281 QFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-N-RTVAVWNFRGELVTSFEDHLLWH 356 (474)
Q Consensus 281 ~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s-D-~tIklWd~~G~ll~tl~gH~~~~ 356 (474)
+.++.|... ..++.|.+.|+...............+..+++.| +|.++.+.. . +.|...+++|+..+.+-......
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~ 165 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 165 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCC
Confidence 346677665 5789999999876554444444556899999998 666777765 4 78988899888776664322221
Q ss_pred CCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEe
Q 011970 357 PDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 357 ~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl 407 (474)
-+.|+++|+++.|.-+.. ..+.|...|+. |.-.+++
T Consensus 166 ----P~gla~d~~~~~lY~~D~----------~~~~I~~~d~d-g~~~~~~ 201 (316)
T 1ijq_A 166 ----PNGITLDLLSGRLYWVDS----------KLHSISSIDVN-GGNRKTI 201 (316)
T ss_dssp ----EEEEEEETTTTEEEEEET----------TTTEEEEEETT-SCSCEEE
T ss_pred ----ceEEEEeccCCEEEEEEC----------CCCeEEEEecC-CCceEEE
Confidence 479999998777765432 26789999974 5544444
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.39 E-value=0.00049 Score=69.02 Aligned_cols=183 Identities=10% Similarity=0.058 Sum_probs=122.4
Q ss_pred CCcEEEeecCCCeEEEEEc-CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCC
Q 011970 207 DSIYKVFDLKNYTMLYSIS-DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNE 284 (474)
Q Consensus 207 D~tiKlWdl~tg~~l~tl~-~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~ 284 (474)
...|+..++.+......+. ......|+|.| ++.|..+. ...+.|..+++.++.....+.........+++. +.++
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D--~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd-~~~g 128 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSD--VTLDRILRANLNGSNVEEVVSTGLESPGGLAVD-WVHD 128 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSSCSCCCEEEEE-TTTT
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEe--ccCCceEEEecCCCCceEEEeCCCCCccEEEEe-cCCC
Confidence 3457778887655544444 35688999995 67776664 335689999987665444343333445677775 4466
Q ss_pred eEEEE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcC-CCcEEEEEc-C-CcEEEEeCCCcEEEEeccCCCCcCCCC
Q 011970 285 KLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-N-RTVAVWNFRGELVTSFEDHLLWHPDCN 360 (474)
Q Consensus 285 ~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s-D-~tIklWd~~G~ll~tl~gH~~~~~~~~ 360 (474)
.|... ...+.|.+.|+...............+..+++.| +|.++.+-. + +.|...+++|...+.+-......
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~---- 204 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW---- 204 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSC----
T ss_pred eEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC----
Confidence 77665 5678999999876554444455667899999998 667777766 6 88999999887666664322211
Q ss_pred eeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEe
Q 011970 361 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 361 v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl 407 (474)
-+.|+|+|+++.|.-+.. ..+.|...|+ .|.-..++
T Consensus 205 PnGla~d~~~~~lY~aD~----------~~~~I~~~~~-dG~~~~~~ 240 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDA----------KHHVIERANL-DGSHRKAV 240 (349)
T ss_dssp EEEEEEETTTTEEEEEET----------TTTEEEEEET-TSCSCEEE
T ss_pred cceEEEeCCCCEEEEEEC----------CCCEEEEEeC-CCCceEEE
Confidence 379999997776654432 3678999996 45444443
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.38 E-value=4.4e-06 Score=92.43 Aligned_cols=186 Identities=10% Similarity=-0.009 Sum_probs=107.4
Q ss_pred CceEEEEeCCCCeEEEEecC-----CCcEEEeecCCC-eEEE-EEcCCcEEEEEEcCCc-eEEEEecCCCC--ccEEEEe
Q 011970 187 WPGFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNY-TMLY-SISDKHVQEIKISPGI-MLLIFNRSSSH--VPLKILS 256 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~-----D~tiKlWdl~tg-~~l~-tl~~~~V~~vafSpg~-~la~~s~~s~D--~tIkLWd 256 (474)
+....+||||||+.||.+.. ..+|+++|+++| +.+. .+. ....+++|||++ .|+........ ..|.+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-EECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-CceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 34578997469999997553 246999999999 6321 111 112468899854 55554322111 3588899
Q ss_pred cCCCeE--EEEEee-cCcceeEEEEEecCCCeEEEEe---CCCcEEEEECCCC--ce--EEeccccCCceEEEEEcCCCc
Q 011970 257 IEDGTV--LKVFYH-LLHRNKKVDFIEQFNEKLLVKQ---ENENLQILDVRNA--EL--MEVSRTEFMTPSAFIFLYENQ 326 (474)
Q Consensus 257 i~tG~~--L~tl~~-h~~~v~~V~F~~~~~~~ll~~~---~D~tIkIWDv~tg--~~--~~~l~~h~~~v~sv~Fspdg~ 326 (474)
+.+++. ...+.. .......+.|+ |++.+|+..+ ....|.++|+.++ +. ..+..++....+++.|..+++
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKA-ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEEC-TTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE
T ss_pred CCCCchhcEEEEecCCCceEEEEEEC-CCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE
Confidence 988752 233332 22345667776 7788888754 3456788899886 34 444444555667777777777
Q ss_pred EEEEEc-C--C--cEEEEeCC-CcEEEE-eccCCCCcCCCCeeEEEECCCCCEEEEEec
Q 011970 327 LFLTFR-N--R--TVAVWNFR-GELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 327 llaS~s-D--~--tIklWd~~-G~ll~t-l~gH~~~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
+++... + + .|-++|+. +...+. +-.|... ..+.++.+. ++.+++++..
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~---~~l~~~~~~-~~~lv~~~~~ 387 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSED---VFMESIAVR-SNYLVVAGRR 387 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSS---EEEEEEEEC-SSEEEEEEEE
T ss_pred EEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCC---cEEEEEEEE-CCEEEEEEEe
Confidence 777665 5 3 44445554 233233 3333321 124555554 3445555554
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.34 E-value=0.00078 Score=66.32 Aligned_cols=205 Identities=8% Similarity=0.040 Sum_probs=134.8
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCC---CeEEE-EEcC--CcEEEEEEcC-CceEEEEecCCCCccEEEEec
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN---YTMLY-SISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSI 257 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~t---g~~l~-tl~~--~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi 257 (474)
+..|..++|++.++++..+....+.|..+|+.+ +.... .+.. .....|++.+ ++.|..+. ...+.|.+.|.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d--~~~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD--SVLGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE--TTTTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEE--CCCCEEEEEeC
Confidence 556778999865678888888889999999876 23222 2332 4567899985 66666653 33578999997
Q ss_pred CCCeEEEEEe-ecCcceeEEEEEecCCCeEEEEeCC--CcEEEEECCCCceEEe-ccccCCceEEEEEcCC-CcEEEEEc
Q 011970 258 EDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNAELMEV-SRTEFMTPSAFIFLYE-NQLFLTFR 332 (474)
Q Consensus 258 ~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~~D--~tIkIWDv~tg~~~~~-l~~h~~~v~sv~Fspd-g~llaS~s 332 (474)
. |+..+++- .....-..+++. |.++.|..+..+ +.|...++. |...++ .......+..++++|+ ++++.+-+
T Consensus 107 ~-g~~~~~~~~~~~~~P~~iavd-p~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 107 K-GVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp T-SSSEEEEEECTTCCEEEEEEE-TTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred C-CCceEEEEECCCCCcceEEeC-CCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEEC
Confidence 5 44444443 334556788876 556777776533 688888875 444433 3345678999999975 55666666
Q ss_pred -CCcEEEEeCCCcEEEEeccC--CCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecC
Q 011970 333 -NRTVAVWNFRGELVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 409 (474)
Q Consensus 333 -D~tIklWd~~G~ll~tl~gH--~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~g 409 (474)
.+.|...|++|.-.+++-.. ...+ -.++++. ++.+.++-. ..+.|...|..+|+.+.++..
T Consensus 184 ~~~~I~~~d~dg~~~~~~~~~~~~~~~----P~giav~-~~~ly~~d~-----------~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 184 KLHSISSIDVNGGNRKTILEDEKRLAH----PFSLAVF-EDKVFWTDI-----------INEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp TTTEEEEEETTSCSCEEEEECTTTTSS----EEEEEEE-TTEEEEEET-----------TTTEEEEEETTTCCCCEEEEC
T ss_pred CCCeEEEEecCCCceEEEeecCCccCC----cEEEEEE-CCEEEEEEC-----------CCCeEEEEeCCCCcceEEEec
Confidence 88999999987655554321 1222 2578884 455555543 268899999889988887754
Q ss_pred C
Q 011970 410 T 410 (474)
Q Consensus 410 H 410 (474)
.
T Consensus 248 ~ 248 (316)
T 1ijq_A 248 N 248 (316)
T ss_dssp S
T ss_pred C
Confidence 3
No 276
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.32 E-value=0.00022 Score=77.04 Aligned_cols=221 Identities=10% Similarity=0.060 Sum_probs=134.4
Q ss_pred EEEEee------CCCeEEeeeccccceeeEeecCCCce----------------------------------------E-
Q 011970 100 IVFALA------HSGVCAAFSRETNRRICFLNVSPDEV----------------------------------------I- 132 (474)
Q Consensus 100 ~las~s------~dgtiklW~~~tg~~l~~l~g~~~~~----------------------------------------i- 132 (474)
+|+.++ .+|.+..+|..||+.+=..... +.. +
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~-~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w 248 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFV-EGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPW 248 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESS-TTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCC
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCCC-ccccccccCcccccccccccccCCCccccccccccccccCCcccc
Confidence 666665 3899999999999987654321 000 0
Q ss_pred EEEEEeeCCCEEEEEEeec----------C-------CCccceeeeEEEEeEeccCCCCCccceeeec---c-------c
Q 011970 133 RSLFYNKNNDSLITVSVYA----------S-------DNFSSLKCRSTKIEYIRRGKPDSGFALFESE---S-------L 185 (474)
Q Consensus 133 ~sv~fspdg~~Lis~S~~~----------s-------~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~---~-------~ 185 (474)
.+.+|.|+..+|..++... . ++ +--..+.-+|+.+|+. +|... + .
T Consensus 249 ~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~---~~~~~v~AlD~~TG~~-----~W~~q~~~~d~wd~~~~ 320 (582)
T 1flg_A 249 QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDS---LYTSGQVGVDPSSGEV-----KWFYQHTPNDAWDFSGN 320 (582)
T ss_dssp SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCC---TTCSEEEEECTTTCCE-----EEEEESSTTCCSCCCCC
T ss_pred CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCC---cccceEEEEeCCCCCE-----EEEEeCCCCCcccccCC
Confidence 1467778877776554211 0 11 1113566678888986 34431 1 1
Q ss_pred cCceEEEEeCCCCe---EEEEecCCCcEEEeecCCCeEEEEEcCC----cEE----------------------------
Q 011970 186 KWPGFVEFDDVNGK---VLTYSAQDSIYKVFDLKNYTMLYSISDK----HVQ---------------------------- 230 (474)
Q Consensus 186 ~~~~~V~Fs~~nGk---~LaS~s~D~tiKlWdl~tg~~l~tl~~~----~V~---------------------------- 230 (474)
..|-.+.....||+ +|+.++.++.+.++|.+||+++....-. +..
T Consensus 321 ~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~ 400 (582)
T 1flg_A 321 NELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGK 400 (582)
T ss_dssp CCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCC
T ss_pred CCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCC
Confidence 11222233214784 7888999999999999999998766421 111
Q ss_pred ---------------EEEEcC-CceEEEEec------------------------------CCCCccEEEEecCCCeEEE
Q 011970 231 ---------------EIKISP-GIMLLIFNR------------------------------SSSHVPLKILSIEDGTVLK 264 (474)
Q Consensus 231 ---------------~vafSp-g~~la~~s~------------------------------~s~D~tIkLWdi~tG~~L~ 264 (474)
.++|+| .+++.+... ...++.|.-||+.||+.+-
T Consensus 401 ~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W 480 (582)
T 1flg_A 401 AVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVW 480 (582)
T ss_dssp CEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEE
T ss_pred ceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEE
Confidence 235555 223322210 1235789999999999998
Q ss_pred EEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCC-ceEEEEEcCCCcEEEEE
Q 011970 265 VFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFM-TPSAFIFLYENQLFLTF 331 (474)
Q Consensus 265 tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~-~v~sv~Fspdg~llaS~ 331 (474)
+...+.. +..-... ..++.+.+++.|+.++.+|.++|+.+-.++.... ....++|..||++++..
T Consensus 481 ~~~~~~~-~~~g~~~-tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 481 EHKEHLP-LWAGVLA-TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp EEEESSC-CCSCCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EecCCCC-CcccceE-eCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 8775422 2221111 2367888888999999999999998865443221 22236677788766554
No 277
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=0.00013 Score=77.83 Aligned_cols=265 Identities=11% Similarity=0.099 Sum_probs=152.0
Q ss_pred cccCceEEEEeCC-CCeEEEEecCCCcEEEeecCCCeEEEEEcC-----CcEEEEEE-------cC-CceEEEEecCCC-
Q 011970 184 SLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSISD-----KHVQEIKI-------SP-GIMLLIFNRSSS- 248 (474)
Q Consensus 184 ~~~~~~~V~Fs~~-nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~-----~~V~~vaf-------Sp-g~~la~~s~~s~- 248 (474)
.+..|..|+|+|. ++++.++....+.|++.|++++.....+.. +....|+| ++ |.+|.++.....
T Consensus 137 ~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 137 GFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp CCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred ccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 4667889999841 466666655557799999988776544432 24899999 97 554666644321
Q ss_pred ---CccEEEEecCC-CeEE-----EEEeecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECC-------CCce------
Q 011970 249 ---HVPLKILSIED-GTVL-----KVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVR-------NAEL------ 305 (474)
Q Consensus 249 ---D~tIkLWdi~t-G~~L-----~tl~~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~-------tg~~------ 305 (474)
...|.+.+... |+.. +++... .+-..+++. |+++.|.++ ..++.|..+|+. +++.
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavd-p~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIH-PINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEEC-TTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred cccCceEEEEecCCCCceeecccceeeccC-CCceEEEEc-CCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 12355665433 3321 222211 123466654 556777765 578889999998 6654
Q ss_pred -----EEe-c-cccCCceEEEEEcCCCc-EEEEEc-CCcEEEEeCCCc--EE---EEeccC---CCCcCC-------CCe
Q 011970 306 -----MEV-S-RTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFRGE--LV---TSFEDH---LLWHPD-------CNT 361 (474)
Q Consensus 306 -----~~~-l-~~h~~~v~sv~Fspdg~-llaS~s-D~tIklWd~~G~--ll---~tl~gH---~~~~~~-------~~v 361 (474)
.+. . .+...+++.++|+|+|+ ++++-+ ...|+.++.+|+ .+ .++.|. .++... ..-
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P 374 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNP 374 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSE
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCC
Confidence 211 1 23345788999999999 567766 889999776442 22 445443 111000 001
Q ss_pred e-EEEEC-------CCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccc
Q 011970 362 N-NIYIT-------SDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNK 433 (474)
Q Consensus 362 ~-svafS-------pDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~ 433 (474)
. .++.. ++|.+.++=+. ...||..+ .+|+ +.++-|.... ...+.. ....
T Consensus 375 ~~gv~vd~~~~~~~~~g~lyVaD~~-----------N~rIr~i~-~~G~-v~TiaG~g~~--~~~~~~--------~~~G 431 (496)
T 3kya_A 375 CQGVFVKNPDYTGEEEYDFYFVDRL-----------NFCVRKVT-PEGI-VSTYAGRGAS--TSLADG--------NQWG 431 (496)
T ss_dssp EEEEEEECTTCCSSCCEEEEEEEGG-----------GTEEEEEC-TTCB-EEEEEESCTT--HHHHHS--------CSCC
T ss_pred eEEEEEccccccccCCCeEEEEECC-----------CCEEEEEe-CCCC-EEEEeccccc--ccccCc--------cccc
Confidence 2 35554 67788776443 68999999 6884 5677664310 000000 0000
Q ss_pred cccccccccccccCEEEEEEcCC-CCEEEEEcCCCcEEEcc
Q 011970 434 SSYIRSTVGEALEDITSLFYDEE-RNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 434 ~~~~~~~~~~~l~~V~slafSpD-g~~LaSgs~DgtVklWd 473 (474)
..+......-.|..-+.|+++|+ |..+++=.....||..+
T Consensus 432 ~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 432 TDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTIS 472 (496)
T ss_dssp CCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEE
Confidence 00000001123457789999997 77666666777787654
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.25 E-value=8.4e-05 Score=80.81 Aligned_cols=159 Identities=11% Similarity=-0.005 Sum_probs=98.7
Q ss_pred EEEEeCCCCe---EEEEecCCCcEEEeecCCCeEEEEEcC-C-----cEEE-EEEcCCceEEEEecCC---CCccEEEEe
Q 011970 190 FVEFDDVNGK---VLTYSAQDSIYKVFDLKNYTMLYSISD-K-----HVQE-IKISPGIMLLIFNRSS---SHVPLKILS 256 (474)
Q Consensus 190 ~V~Fs~~nGk---~LaS~s~D~tiKlWdl~tg~~l~tl~~-~-----~V~~-vafSpg~~la~~s~~s---~D~tIkLWd 256 (474)
.++++|.+|+ .|..++.|+.+.-.|.+||+.+..... . .+.+ -.+. ++++++.+... .++.|.-+|
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEE
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEE
Confidence 3566422454 144567799999999999998876542 1 1211 1112 55655543211 267899999
Q ss_pred cCCCeEEEEEeecCcc-------------------------------------ee-EEEEEecCCCeEEEEeCC------
Q 011970 257 IEDGTVLKVFYHLLHR-------------------------------------NK-KVDFIEQFNEKLLVKQEN------ 292 (474)
Q Consensus 257 i~tG~~L~tl~~h~~~-------------------------------------v~-~V~F~~~~~~~ll~~~~D------ 292 (474)
.+||+++-++...... ++ ..++. +..+.+..+..+
T Consensus 189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d-~~~g~vy~g~g~~~p~~~ 267 (599)
T 1w6s_A 189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYD-PGTNLIYFGTGNPAPWNE 267 (599)
T ss_dssp TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEE-TTTTEEEEECCCCSCSCG
T ss_pred CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEe-CCCCEEEEeCCCCccccC
Confidence 9999999887632110 11 12332 456677776543
Q ss_pred ----------CcEEEEECCCCceEEec--cccCC-------ceEEEEEc-CCC---cEEEEEc-CCcEEEEeC-CCcEEE
Q 011970 293 ----------ENLQILDVRNAELMEVS--RTEFM-------TPSAFIFL-YEN---QLFLTFR-NRTVAVWNF-RGELVT 347 (474)
Q Consensus 293 ----------~tIkIWDv~tg~~~~~l--~~h~~-------~v~sv~Fs-pdg---~llaS~s-D~tIklWd~-~G~ll~ 347 (474)
..|.-+|..||+.+-.. .+|.. .+.-+... .+| ++++.++ ++.+-+.|. +|+++.
T Consensus 268 ~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 268 TMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp GGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 48999999999987543 23321 12222222 578 5777777 999999999 599987
Q ss_pred Eec
Q 011970 348 SFE 350 (474)
Q Consensus 348 tl~ 350 (474)
..+
T Consensus 348 ~~~ 350 (599)
T 1w6s_A 348 ANK 350 (599)
T ss_dssp EEE
T ss_pred ccc
Confidence 654
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.24 E-value=0.00094 Score=66.39 Aligned_cols=227 Identities=15% Similarity=0.158 Sum_probs=144.9
Q ss_pred eEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEE-EEEc--CCcEEEEEEcC-
Q 011970 161 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSIS--DKHVQEIKISP- 236 (474)
Q Consensus 161 ~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l-~tl~--~~~V~~vafSp- 236 (474)
+.|+..++..+..... .+.. .+..+..|+|++.+|++..+-...+.|..+++.++... ..+. -.....+++.+
T Consensus 13 ~~I~~i~l~~~~~~~~-~~~~--~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 13 RDLRLVDATNGKENAT-IVVG--GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEETTCTTSCCE-EEEE--EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred CeEEEEECCCCceEEE-EEec--CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 4566666544432111 1222 24455689998667888888888999999998766321 1121 24566899986
Q ss_pred CceEEEEecCCCCccEEEEecCCCeEEEEEe-ecCcceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCceEEeccccC
Q 011970 237 GIMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEF 313 (474)
Q Consensus 237 g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~--~D~tIkIWDv~tg~~~~~l~~h~ 313 (474)
++.|..+. .....|.+.++. |....++. .....-..+++. |.++.|..+. ....|...++.............
T Consensus 90 ~g~ly~~d--~~~~~I~~~~~d-G~~~~~l~~~~~~~P~giavd-p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l 165 (318)
T 3sov_A 90 GEKLYWTD--SETNRIEVSNLD-GSLRKVLFWQELDQPRAIALD-PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI 165 (318)
T ss_dssp TTEEEEEE--TTTTEEEEEETT-SCSCEEEECSSCSSEEEEEEE-GGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred CCeEEEEE--CCCCEEEEEECC-CCcEEEEEeCCCCCccEEEEe-CCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCC
Confidence 66666653 335689999975 44444443 334455788876 4467777764 46788888876444333334456
Q ss_pred CceEEEEEcC-CCcEEEEEc-CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCC
Q 011970 314 MTPSAFIFLY-ENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG 391 (474)
Q Consensus 314 ~~v~sv~Fsp-dg~llaS~s-D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dg 391 (474)
..+..++|+| +++++.+-+ .+.|...|++|.-.+++-.....+ -..+++.. +.+..+-. ..+
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~----P~glav~~-~~lywtd~-----------~~~ 229 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPH----PFALTLFE-DILYWTDW-----------STH 229 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSC----EEEEEEET-TEEEEEET-----------TTT
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCC----ceEEEEeC-CEEEEEec-----------CCC
Confidence 7899999998 566667766 889999999876555443222223 25777753 34444432 268
Q ss_pred eEEEEeCCCCeEEEEecCC
Q 011970 392 SINVSSILTGKCLAKINAT 410 (474)
Q Consensus 392 tIklWdi~tG~cl~tl~gH 410 (474)
.|...|..+|+.++++...
T Consensus 230 ~V~~~~~~~G~~~~~i~~~ 248 (318)
T 3sov_A 230 SILACNKYTGEGLREIHSD 248 (318)
T ss_dssp EEEEEETTTCCSCEEEECC
T ss_pred eEEEEECCCCCceEEEeCC
Confidence 9999998899887777543
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.23 E-value=0.00074 Score=70.09 Aligned_cols=234 Identities=9% Similarity=0.054 Sum_probs=143.5
Q ss_pred EEEeec----cEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEe
Q 011970 93 EIVAAR----DIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 168 (474)
Q Consensus 93 ~i~~s~----~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i 168 (474)
.|++.. ..|..+...+.|+.++.++|+....+ + .......|+|+|+|+.+++ ...+..+ ....++..
T Consensus 143 gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~-~~~~P~giavd~dG~lyVa-d~~~~~~------~~gv~~~~ 213 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-T-NIGQCADVNFTLNGDMVVV-DDQSSDT------NTGIYLFT 213 (433)
T ss_dssp EEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-C-CCSCEEEEEECTTCCEEEE-ECCSCTT------SEEEEEEC
T ss_pred eEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-c-CCCCccEEEECCCCCEEEE-cCCCCcc------cceEEEEE
Confidence 566652 45555544488999998777655443 3 3455899999999994443 2111111 12222333
Q ss_pred ccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE-c--C-CcEEEEEEcCC-ceEEEE
Q 011970 169 RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-S--D-KHVQEIKISPG-IMLLIF 243 (474)
Q Consensus 169 ~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl-~--~-~~V~~vafSpg-~~la~~ 243 (474)
..+..... ..+. .+..|..+++++.+|.+.++...++.|..+|..+|+....+ . . ..-..|+|+|+ ..|.++
T Consensus 214 ~~~~~~~~-~~~~--~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 214 RASGFTER-LSLC--NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp GGGTTCCE-EEEE--ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred CCCCeecc-cccc--ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 44443211 1122 35677889998438988888778889999999888763332 1 1 23346999984 446666
Q ss_pred ecCCCCccEEEEecC--CCeEE--EEEeec---------------CcceeEEEEEe-------cCCCeEEEE-eCCCcEE
Q 011970 244 NRSSSHVPLKILSIE--DGTVL--KVFYHL---------------LHRNKKVDFIE-------QFNEKLLVK-QENENLQ 296 (474)
Q Consensus 244 s~~s~D~tIkLWdi~--tG~~L--~tl~~h---------------~~~v~~V~F~~-------~~~~~ll~~-~~D~tIk 296 (474)
. ...+.|..++.. +|+.. .++.+. ...-..++|.. ..++.|.++ ..++.|+
T Consensus 291 d--~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~ 368 (433)
T 4hw6_A 291 Y--NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVR 368 (433)
T ss_dssp E--TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEE
T ss_pred e--CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEE
Confidence 4 335678887754 45321 233332 12235577731 234556665 5788999
Q ss_pred EEECCCCceEEecc-----------------ccCCceEEEEEc-CCCcEEEEEc-CCcEEEEeC
Q 011970 297 ILDVRNAELMEVSR-----------------TEFMTPSAFIFL-YENQLFLTFR-NRTVAVWNF 341 (474)
Q Consensus 297 IWDv~tg~~~~~l~-----------------~h~~~v~sv~Fs-pdg~llaS~s-D~tIklWd~ 341 (474)
.+|. +|+...... ..+..|..+++. ++|.++++-. ++.|+..++
T Consensus 369 ~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 369 VLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 9994 676544321 124579999999 8999999887 888887765
No 281
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.001 Score=71.02 Aligned_cols=251 Identities=14% Similarity=0.085 Sum_probs=145.9
Q ss_pred EEEEee----ccEEEEeeCCCeEEeeeccccceeeEeecC--CCceEEEEEE-------eeCCCEEEEEEeecCCCccce
Q 011970 92 IEIVAA----RDIVFALAHSGVCAAFSRETNRRICFLNVS--PDEVIRSLFY-------NKNNDSLITVSVYASDNFSSL 158 (474)
Q Consensus 92 ~~i~~s----~~~las~s~dgtiklW~~~tg~~l~~l~g~--~~~~i~sv~f-------spdg~~Lis~S~~~s~d~s~L 158 (474)
.-++|. +.+.++--..+.|++.|.++++....+..+ ..+..+.|+| +++|++|+.+...+.. . ..
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~-~-~~ 219 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK-G-DE 219 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT-G-GG
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC-c-cc
Confidence 345555 334444444577888888855554433322 1235899999 9999977765433211 0 00
Q ss_pred eeeEEEEeEecc-CCCCC-c-cceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecC-------CCeE--------
Q 011970 159 KCRSTKIEYIRR-GKPDS-G-FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-------NYTM-------- 220 (474)
Q Consensus 159 k~~~~~iw~i~~-G~~~~-~-~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~-------tg~~-------- 220 (474)
. +.+-+-+... |++.. . ..... ...+|..++++|.+|.++++...++.|..+|++ +++.
T Consensus 220 ~-~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 S-PSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp E-EEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred C-ceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 0 2232223222 45421 0 01222 256777899985478888888889999999998 6653
Q ss_pred ------EEEEcC-CcEEEEEEcCCc-eEEEEecCCCCccEEEEe--cCCCeEE--EEEeecC---------------cce
Q 011970 221 ------LYSISD-KHVQEIKISPGI-MLLIFNRSSSHVPLKILS--IEDGTVL--KVFYHLL---------------HRN 273 (474)
Q Consensus 221 ------l~tl~~-~~V~~vafSpg~-~la~~s~~s~D~tIkLWd--i~tG~~L--~tl~~h~---------------~~v 273 (474)
+.++.. .+-..|+|+|++ .|.++. ...+.|+.++ -.+++.. .++.+.. ..-
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD--~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P 374 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV--INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNP 374 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEE--TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEe--CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCC
Confidence 334443 345789999854 455553 3356787754 4555431 3454420 011
Q ss_pred eEEEEEe-c-----CCCeEEEE-eCCCcEEEEECCCCceEEecc-------------c----------cCCceEEEEEcC
Q 011970 274 KKVDFIE-Q-----FNEKLLVK-QENENLQILDVRNAELMEVSR-------------T----------EFMTPSAFIFLY 323 (474)
Q Consensus 274 ~~V~F~~-~-----~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~-------------~----------h~~~v~sv~Fsp 323 (474)
....|.. + .++.|.++ ..++.||.+| .+|....... | .+..|..|++.+
T Consensus 375 ~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~ 453 (496)
T 3kya_A 375 CQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD 453 (496)
T ss_dssp EEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred eEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence 2133332 1 24456665 5889999999 5775443211 1 245799999999
Q ss_pred C-CcEEEEEc-CCcEEEEeCCCc-EEEEec
Q 011970 324 E-NQLFLTFR-NRTVAVWNFRGE-LVTSFE 350 (474)
Q Consensus 324 d-g~llaS~s-D~tIklWd~~G~-ll~tl~ 350 (474)
+ |.++++-+ +..|+..+++++ +++...
T Consensus 454 ~~g~lyVaD~~N~rIrki~~~~~~~~~~~~ 483 (496)
T 3kya_A 454 VKEMFYVHDQVGHTIRTISMEQEENVAGDE 483 (496)
T ss_dssp TTTEEEEEETTTTEEEEEEECCCC------
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcccccCC
Confidence 7 99999888 889999998754 555443
No 282
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.21 E-value=0.002 Score=63.67 Aligned_cols=265 Identities=12% Similarity=0.063 Sum_probs=145.1
Q ss_pred cccEEEEEee--ccEEEEeeCCCeEEeeeccccceeeEeec---CCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeE
Q 011970 88 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNV---SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRS 162 (474)
Q Consensus 88 ~~~V~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~g---~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~ 162 (474)
...+.+|.|. +..+| ....|.+ +...+-|+--..+.. .+...+.+|+|+| +..++ ++.. . .
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~---g-------~ 100 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEP---P-------I 100 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEET---T-------E
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECC---C-------e
Confidence 4568899986 45555 5567876 333444543333321 1244799999986 44343 3321 1 1
Q ss_pred EEEeEecc-CCCCCccceeeec-----cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe---EEEEEcCCcEEEEE
Q 011970 163 TKIEYIRR-GKPDSGFALFESE-----SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSISDKHVQEIK 233 (474)
Q Consensus 163 ~~iw~i~~-G~~~~~~~lf~~~-----~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~---~l~tl~~~~V~~va 233 (474)
|+.-.+ |+- |+.. .-..+..+.+. +++++++.+.....+|-+| .|+ .+.......+.+++
T Consensus 101 --i~~S~DgG~t------W~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~ 169 (327)
T 2xbg_A 101 --MLHTTDGGQS------WSQIPLDPKLPGSPRLIKAL-GNGSAEMITNVGAIYRTKD--SGKNWQALVQEAIGVMRNLN 169 (327)
T ss_dssp --EEEESSTTSS------CEECCCCTTCSSCEEEEEEE-ETTEEEEEETTCCEEEESS--TTSSEEEEECSCCCCEEEEE
T ss_pred --EEEECCCCCC------ceECccccCCCCCeEEEEEE-CCCCEEEEeCCccEEEEcC--CCCCCEEeecCCCcceEEEE
Confidence 111122 332 2210 01123467776 4688888776444456555 343 22221235689999
Q ss_pred EcCCceEEEEecCCCCccEEEEecCCCeEEEEEe-ecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEecc-c
Q 011970 234 ISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR-T 311 (474)
Q Consensus 234 fSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~-~ 311 (474)
++|++.+++.+.. ..-.+-+|- .|+--+.+. .....+..+.+. + ++.+.+.+.++.+.+++...|+.-+... .
T Consensus 170 ~~~~~~~~~~g~~--G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~-~-~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~ 244 (327)
T 2xbg_A 170 RSPSGEYVAVSSR--GSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFT-P-DGRLWMIVNGGKIAFSDPDNSENWGELLSP 244 (327)
T ss_dssp ECTTSCEEEEETT--SSEEEEECT-TCSSCEEEECCSSSCEEEEEEC-T-TSCEEEEETTTEEEEEETTEEEEECCCBCT
T ss_pred EcCCCcEEEEECC--CcEEEEeCC-CCCceeECCCCCCCccceeEEC-C-CCCEEEEeCCceEEEecCCCCCeeEeccCC
Confidence 9975555544322 223444441 122222221 233456778875 3 3566777788888887533354333221 1
Q ss_pred ---cCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCcccccc
Q 011970 312 ---EFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWME 387 (474)
Q Consensus 312 ---h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~ 387 (474)
+...+.+++|.|++++++.+.+++| ++..+ |+--+.+...... + ..+..|.|.+++++++.|.
T Consensus 245 ~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~-~-~~~~~v~~~~~~~~~~~G~---------- 311 (327)
T 2xbg_A 245 LRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKV-P-SNFYKILFFSPDQGFILGQ---------- 311 (327)
T ss_dssp TSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTS-S-SCCCEEEEEETTEEEEECS----------
T ss_pred cccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCC-C-CCeEEEEEECCCceEEEcC----------
Confidence 2345789999999999998888888 56665 7655555422110 0 1257898987777776542
Q ss_pred CCCCeEEEEe
Q 011970 388 GSAGSINVSS 397 (474)
Q Consensus 388 s~DgtIklWd 397 (474)
+|+|.-++
T Consensus 312 --~G~i~~~~ 319 (327)
T 2xbg_A 312 --KGILLRYV 319 (327)
T ss_dssp --TTEEEEEC
T ss_pred --CceEEEEc
Confidence 78775554
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.17 E-value=0.0057 Score=62.53 Aligned_cols=232 Identities=11% Similarity=0.109 Sum_probs=149.2
Q ss_pred CCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCC-CCccceeeecc
Q 011970 106 HSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKP-DSGFALFESES 184 (474)
Q Consensus 106 ~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~-~~~~~lf~~~~ 184 (474)
....|+.-++.+++....+.+ ...+..|+|.+.++.|--+. ... +.|...++..+.. .....+... .
T Consensus 90 ~~~~I~~i~l~~~~~~~~~~~--~~~~~~l~~d~~~~~lywsD--~~~-------~~I~~~~~~g~~~~~~~~~~~~~-~ 157 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSD--LSQ-------RMICSTQLDRAHGVSSYDTVISR-D 157 (400)
T ss_dssp ETTEEEEECTTSCSCEEEECS--CSCEEEEEEETTTTEEEEEE--TTT-------TEEEEEEC------CCCEEEECS-S
T ss_pred ccceeEEEccCCcceeEeccc--cCcceEEeeeeccCceEEEe--cCC-------CeEEEEEcccCCCCCcceEEEeC-C
Confidence 346777777775544444432 35588999999877765532 222 3455555432110 000122332 3
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 261 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~ 261 (474)
+..|..++++..+|.+..+-+..+.|.+.|++.......+. ......|++.| ++.|..+.. +....|...++ +|+
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~-~~~~~I~~~~~-dG~ 235 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW-GTPAKIKKGGL-NGV 235 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEEC-SSSCCEEEEET-TSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeC-CCCCEEEEEeC-CCC
Confidence 56788999986588888888888999999987544333333 24688999998 666666543 22356888887 455
Q ss_pred EEEEEe-ecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEecc--ccCCceEEEEEcCCCcEEEEEc-CCcE
Q 011970 262 VLKVFY-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSR--TEFMTPSAFIFLYENQLFLTFR-NRTV 336 (474)
Q Consensus 262 ~L~tl~-~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~--~h~~~v~sv~Fspdg~llaS~s-D~tI 336 (474)
...++. .....-..+++. +++++|..+ ...+.|...|+.......+.. +....+.++++ .++.++.+-. .+.|
T Consensus 236 ~~~~~~~~~l~~P~glavd-~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V 313 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLD-LLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAI 313 (400)
T ss_dssp SCEEEECSSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSE
T ss_pred ccEEEEECCCCceEEEEEE-eCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeE
Confidence 544443 334566888987 557777776 578899999987655444333 23457788887 6678888887 8899
Q ss_pred EEEeC-CCcEEEEeccCC
Q 011970 337 AVWNF-RGELVTSFEDHL 353 (474)
Q Consensus 337 klWd~-~G~ll~tl~gH~ 353 (474)
...|. +|+.+.++....
T Consensus 314 ~~~~~~~G~~~~~i~~~~ 331 (400)
T 3p5b_L 314 FSANRLTGSDVNLLAENL 331 (400)
T ss_dssp EEEESSSCCCCEEEECSC
T ss_pred EEEEcCCCCceEEEecCC
Confidence 99995 698877776443
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.15 E-value=0.0037 Score=63.93 Aligned_cols=207 Identities=8% Similarity=0.038 Sum_probs=136.8
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCC----eEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEec
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSI 257 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg----~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi 257 (474)
+..+..|+|++.++++..+....+.|+.+++.+. .....+. -.....||+.+ ++.|..+. ...+.|.+.++
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d--~~~~~I~~~~~ 188 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD--SVLGTVSVADT 188 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEE--TTTTEEEEECT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEE--CCCCeEEEEeC
Confidence 5667789999667888888888899999998652 2222232 24678999996 77776664 33568999998
Q ss_pred CCCeEEEEEeecCcceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCceEEeccccCCceEEEEEcCC-CcEEEEEc-C
Q 011970 258 EDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-N 333 (474)
Q Consensus 258 ~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~--~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspd-g~llaS~s-D 333 (474)
..+.....+......-..|++. |.++.|..+. ....|...++..............++..++|+|+ ++++.+-+ .
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavd-p~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEE-TTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCceEEEEeCCCCCcceEEEe-cccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 6544433333334556788876 4567777764 3478988898765544444555678999999975 55556656 8
Q ss_pred CcEEEEeCCCcEEEEec-cC-CCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 334 RTVAVWNFRGELVTSFE-DH-LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 334 ~tIklWd~~G~ll~tl~-gH-~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
++|...|++|.-.+++- ++ ...+ -.+|++ ..+.+..+-.. .+.|...|..+|+-+.++...
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~----P~gl~v-~~~~lywtd~~-----------~~~V~~~~~~~G~~~~~i~~~ 330 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAH----PFSLAV-FEDKVFWTDII-----------NEAIFSANRLTGSDVNLLAEN 330 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSS----EEEEEE-ETTEEEEEESS-----------SCSEEEEESSSCCCCEEEECS
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCC----CEEEEE-eCCEEEEecCC-----------CCeEEEEEcCCCCceEEEecC
Confidence 89999999876544443 21 1222 246776 23344444322 678999998899888887643
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.14 E-value=0.0059 Score=60.28 Aligned_cols=272 Identities=10% Similarity=0.047 Sum_probs=143.9
Q ss_pred CceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCC
Q 011970 129 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS 208 (474)
Q Consensus 129 ~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~ 208 (474)
...+++|+|.+++..+|. + ... .+ +.....|+--....+-.......+..|+|+ + +..++.+ .++
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G---~~g-------~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~-~-~~~~~~g-~~g 99 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-G---VNA-------TL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQ-G-NEGWIVG-EPP 99 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-E---TTT-------EE-EEESSTTSSCEECCCCCSCCCCEEEEEEEE-T-TEEEEEE-ETT
T ss_pred CCcEEEEEECCCCcEEEE-c---CCC-------eE-EEeCCCCCCCeECCCCCCCCCccEEEEEec-C-CeEEEEE-CCC
Confidence 456999999888887763 3 222 21 122122332110000000011234578997 4 5666654 455
Q ss_pred cEEEeecCCCeEEEEEc-----CCcEEEEEEcC-CceEEEEecCCCCccE-EEEecCCCeEEEEE-eecCcceeEEEEEe
Q 011970 209 IYKVFDLKNYTMLYSIS-----DKHVQEIKISP-GIMLLIFNRSSSHVPL-KILSIEDGTVLKVF-YHLLHRNKKVDFIE 280 (474)
Q Consensus 209 tiKlWdl~tg~~l~tl~-----~~~V~~vafSp-g~~la~~s~~s~D~tI-kLWdi~tG~~L~tl-~~h~~~v~~V~F~~ 280 (474)
.|.. ....|+--..+. ...+..|++.+ +..++.. . ++.| +-+| .|+--... ..+...+..++|.+
T Consensus 100 ~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~---~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~ 172 (327)
T 2xbg_A 100 IMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-N---VGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSP 172 (327)
T ss_dssp EEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-T---TCCEEEESS--TTSSEEEEECSCCCCEEEEEECT
T ss_pred eEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-C---CccEEEEcC--CCCCCEEeecCCCcceEEEEEcC
Confidence 4433 112343211111 13577888874 5444443 2 2333 3333 34332222 23445678888864
Q ss_pred cCCCeEEEEeCC-CcEEEEEC--CCCceEEeccccCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEEEeccC-CCC
Q 011970 281 QFNEKLLVKQEN-ENLQILDV--RNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDH-LLW 355 (474)
Q Consensus 281 ~~~~~ll~~~~D-~tIkIWDv--~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~tl~gH-~~~ 355 (474)
++ .+++.+.+ ...+-+|- .+-+.+. ......+.++++.|++++++.+.++.+.+++.+ |+--+.+... ...
T Consensus 173 -~~-~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~ 248 (327)
T 2xbg_A 173 -SG-EYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRN 248 (327)
T ss_dssp -TS-CEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSC
T ss_pred -CC-cEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccC
Confidence 34 45554444 44445552 2223332 234567889999999999988778988888654 6543333211 000
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccc
Q 011970 356 HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSS 435 (474)
Q Consensus 356 ~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (474)
. -.+..|++.|+++++|.+. ++.| ++....|+--..+......|
T Consensus 249 ~--~~~~~v~~~~~~~~~~~g~------------~g~i-~~S~DgG~tW~~~~~~~~~~--------------------- 292 (327)
T 2xbg_A 249 S--VGFLDLAYRTPNEVWLAGG------------AGAL-LCSQDGGQTWQQDVDVKKVP--------------------- 292 (327)
T ss_dssp C--SCEEEEEESSSSCEEEEES------------TTCE-EEESSTTSSCEECGGGTTSS---------------------
T ss_pred C--cceEEEEecCCCEEEEEeC------------CCeE-EEeCCCCcccEEcCccCCCC---------------------
Confidence 0 1267899999999998764 6777 44444565544443221000
Q ss_pred cccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 436 YIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 436 ~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
..+++|.|.++++ ++.++.+|+|.-++
T Consensus 293 ----------~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 293 ----------SNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp ----------SCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ----------CCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 1567888986654 66667789886553
No 286
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.13 E-value=0.00058 Score=68.68 Aligned_cols=141 Identities=18% Similarity=0.191 Sum_probs=83.9
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeE--EEEEc-----CCcEEEEEEcCC----ceEEEEecCCCC---c
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSIS-----DKHVQEIKISPG----IMLLIFNRSSSH---V 250 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~--l~tl~-----~~~V~~vafSpg----~~la~~s~~s~D---~ 250 (474)
+..|..++|+ |||+++++- .++.|++++ +|+. +..+. ......|+|+|+ +.|.++.....+ .
T Consensus 30 l~~P~~ia~~-pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFL-PDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEEC-TTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEc-CCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 6678899998 799988765 468999998 5652 22332 246889999986 566555332111 4
Q ss_pred cEEEEecCCCe------EEEEEe---ecCcceeEEEEEecCCCeEEEE-eCC-------------CcEEEEECCCC----
Q 011970 251 PLKILSIEDGT------VLKVFY---HLLHRNKKVDFIEQFNEKLLVK-QEN-------------ENLQILDVRNA---- 303 (474)
Q Consensus 251 tIkLWdi~tG~------~L~tl~---~h~~~v~~V~F~~~~~~~ll~~-~~D-------------~tIkIWDv~tg---- 303 (474)
.|..++..+++ ++..+. +..|.-..++|. |+| +|.++ +.. +.|.-+|....
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~-pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFG-PDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEEC-TTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEEC-CCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 57777776542 222243 122344688887 455 55554 321 34544554420
Q ss_pred --------ceEEe-ccccCCceEEEEEcC-CCcEEEEEc
Q 011970 304 --------ELMEV-SRTEFMTPSAFIFLY-ENQLFLTFR 332 (474)
Q Consensus 304 --------~~~~~-l~~h~~~v~sv~Fsp-dg~llaS~s 332 (474)
...++ ..+| ..+..++|.| +|+++++-.
T Consensus 184 npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp CTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEE
T ss_pred CcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEc
Confidence 11111 1222 3477899999 889888865
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.96 E-value=0.0097 Score=59.02 Aligned_cols=227 Identities=11% Similarity=0.082 Sum_probs=145.2
Q ss_pred CCeEEeeeccccc--eeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeecc
Q 011970 107 SGVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESES 184 (474)
Q Consensus 107 dgtiklW~~~tg~--~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~ 184 (474)
...|+..++.++. ....+.+ -.....|+|.+.++.|--+. -.. +.|..+++..+.... .+... .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~--~~~~~~ld~d~~~~~lyw~D--~~~-------~~I~r~~~~g~~~~~--~~~~~-~ 77 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG--LEDAAAVDFVFSHGLIYWSD--VSE-------EAIKRTEFNKTESVQ--NVVVS-G 77 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE--EEEEEEEEEEGGGTEEEEEE--TTT-------TEEEEEETTSSSCCC--EEEEE-C
T ss_pred cCeEEEEECCCCceEEEEEecC--CCccEEEEEEeCCCEEEEEE--CCC-------CcEEEEEccCCCceE--EEEcC-C
Confidence 4577788877553 1112222 23467899999776665432 222 355555644332111 23332 3
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc---CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCC
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS---DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 260 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~---~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG 260 (474)
+..|..+++++.+|.+..+-+..+.|.+.++.. ....++. ...-..|++.| ++.|..+.. +....|...++ +|
T Consensus 78 l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG-~~~~~l~~~~~~~P~giavdp~~g~ly~td~-~~~~~I~r~~~-dG 154 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG-SLRKVLFWQELDQPRAIALDPSSGFMYWTDW-GEVPKIERAGM-DG 154 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEEGGGTEEEEEEC-SSSCEEEEEET-TS
T ss_pred CCCccEEEEEcCCCeEEEEECCCCEEEEEECCC-CcEEEEEeCCCCCccEEEEeCCCCEEEEEec-CCCCEEEEEEc-CC
Confidence 567889999866888888888889999999864 3333332 24678999997 566655532 22356777776 45
Q ss_pred eEEEEEe-ecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEE
Q 011970 261 TVLKVFY-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVA 337 (474)
Q Consensus 261 ~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIk 337 (474)
+...++- .....-..++|. +++++|..+ ...+.|...|+..........+....+..+++. ++.++.+-. .+.|.
T Consensus 155 ~~~~~~~~~~l~~Pnglavd-~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~ 232 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLD-YEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSIL 232 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCCccEEEEe-ccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEE
Confidence 5554443 223455788887 557777776 578899999987544444444456778888884 567777876 88999
Q ss_pred EEeC-CCcEEEEeccC
Q 011970 338 VWNF-RGELVTSFEDH 352 (474)
Q Consensus 338 lWd~-~G~ll~tl~gH 352 (474)
..|. +|+.++++...
T Consensus 233 ~~~~~~G~~~~~i~~~ 248 (318)
T 3sov_A 233 ACNKYTGEGLREIHSD 248 (318)
T ss_dssp EEETTTCCSCEEEECC
T ss_pred EEECCCCCceEEEeCC
Confidence 9998 68877766543
No 288
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.91 E-value=0.043 Score=59.57 Aligned_cols=285 Identities=11% Similarity=0.081 Sum_probs=164.7
Q ss_pred cEEEEEee---ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEe
Q 011970 90 KVIEIVAA---RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (474)
Q Consensus 90 ~V~~i~~s---~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw 166 (474)
....|++. +.+.++-+..+.|...+.+ |....+|-...-+.-+.|++.|.+..|--+. .+ .. . +|+
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d-G~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD-~g-~~------~--~I~ 153 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLD-GSLRKVLFWQELDQPRAIALDPSSGFMYWTD-WG-EV------P--KIE 153 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSCCCCEEEETTTTEEEEEE-CS-SS------C--EEE
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECC-CCCEEEEEeCCCCCCceEEEecCCCeEEEec-cC-CC------C--EEE
Confidence 45677776 5677777788999999977 6555455422334468999999765554322 12 11 1 233
Q ss_pred Ee-ccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE-c--CCcEEEEEEcCCceEEE
Q 011970 167 YI-RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-S--DKHVQEIKISPGIMLLI 242 (474)
Q Consensus 167 ~i-~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl-~--~~~V~~vafSpg~~la~ 242 (474)
.. ..|.... .+.. ..+.||..+++++.++++..+-+..+.|...|+.... ..++ . ...-.+|++..+ .|..
T Consensus 154 r~~~dG~~~~--~l~~-~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gi~~~~~-~ly~ 228 (619)
T 3s94_A 154 RAGMDGSSRF--IIIN-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFED-ILYW 228 (619)
T ss_dssp EEETTSCSCE--EEEC-SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE-EC---------CCCEEESSS-EEEE
T ss_pred EEECCCCceE--EEEe-CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc-cEEEEeCCCCCceEEEEeCC-EEEE
Confidence 22 3454321 2332 2478999999996678888887888889999986433 2222 2 122346777666 4444
Q ss_pred EecCCCCccEEEEecCCCeEEEEEeecCcceeEEE-------------------------EEec----------CC----
Q 011970 243 FNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVD-------------------------FIEQ----------FN---- 283 (474)
Q Consensus 243 ~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~-------------------------F~~~----------~~---- 283 (474)
+. .....|..-|..+|+.+..+......-..|. +..| .|
T Consensus 229 td--~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~ 306 (619)
T 3s94_A 229 TD--WSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLL 306 (619)
T ss_dssp EC--TTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBC
T ss_pred ec--CCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheec
Confidence 43 3356788888888876555432111111121 1111 11
Q ss_pred ----------C-eEEEEeCCCcEEEEECCCCceE--EeccccCCceEEEEEcC-CCcEEEEEc-CCcEEEEeCCCcEEEE
Q 011970 284 ----------E-KLLVKQENENLQILDVRNAELM--EVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFRGELVTS 348 (474)
Q Consensus 284 ----------~-~ll~~~~D~tIkIWDv~tg~~~--~~l~~h~~~v~sv~Fsp-dg~llaS~s-D~tIklWd~~G~ll~t 348 (474)
+ .|+.+ ..+.|+..++.+.+.. .........+.+++|.+ ++.++.+-. .+.|..++.+|.-..+
T Consensus 307 ~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~ 385 (619)
T 3s94_A 307 ENGKTCKDGATELLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQF 385 (619)
T ss_dssp TTSSCBCSSCSEEEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccCcccCCCCceEEEEE-cccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEE
Confidence 1 22333 2346676777765432 12223345688999987 678888876 8899999998754333
Q ss_pred eccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEec
Q 011970 349 FEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 408 (474)
Q Consensus 349 l~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~ 408 (474)
+-...... ...+|+.+.+..|.-+. +..++|.+-++ .|+...+|-
T Consensus 386 v~~~~~~~----p~GlAvD~~~~~lY~tD----------~~~~~I~v~~~-~G~~~~~l~ 430 (619)
T 3s94_A 386 VVTAQIAH----PDGIAVDWVARNLYWTD----------TGTDRIEVTRL-NGTMRKILI 430 (619)
T ss_dssp EECSSCSC----CCEEEEETTTTEEEEEE----------TTTTEEEEEET-TSCSCEEEE
T ss_pred EEECCCCC----cCceEEecccCcEEEEe----------CCCCcEEEEeC-CCCeEEEEE
Confidence 33222111 46899987555444332 13688999886 466555554
No 289
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.89 E-value=0.0078 Score=60.60 Aligned_cols=142 Identities=8% Similarity=0.085 Sum_probs=83.4
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCe-EEEEEc-----CCcEEEEEEcCC----ceEEEEecC-CCC----
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS-----DKHVQEIKISPG----IMLLIFNRS-SSH---- 249 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~-~l~tl~-----~~~V~~vafSpg----~~la~~s~~-s~D---- 249 (474)
+..|..++|+ |||+++++-. ++.|+++| .+|+ .+..+. ......|+|+|+ +.|.++... ..+
T Consensus 28 l~~P~~ia~~-pdG~l~V~e~-~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPL-GGGRYLVTER-PGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEE-ETTEEEEEET-TTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEc-CCCeEEEEeC-CCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 6778899998 7999887654 58899888 5676 333322 246889999985 666555321 112
Q ss_pred ccEEEEecCCC-------eE-EEEEe-ecCcceeEEEEEecCCCeEEEE-eCC-------------CcEEEEECCCCc--
Q 011970 250 VPLKILSIEDG-------TV-LKVFY-HLLHRNKKVDFIEQFNEKLLVK-QEN-------------ENLQILDVRNAE-- 304 (474)
Q Consensus 250 ~tIkLWdi~tG-------~~-L~tl~-~h~~~v~~V~F~~~~~~~ll~~-~~D-------------~tIkIWDv~tg~-- 304 (474)
..|..++...+ +. +..+. +..|.-..++|. |+| +|.++ +.. +.|.-.|....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~-pDG-~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~ 182 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFG-PDG-MLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPA 182 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEEC-TTS-CEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCT
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEEC-CCC-cEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCC
Confidence 45666776554 12 22243 222445678887 455 55554 321 344444543210
Q ss_pred -----eEEec-cccCCceEEEEEcC-CCcEEEEEc
Q 011970 305 -----LMEVS-RTEFMTPSAFIFLY-ENQLFLTFR 332 (474)
Q Consensus 305 -----~~~~l-~~h~~~v~sv~Fsp-dg~llaS~s 332 (474)
-.+++ .+| ..+..++|.| +|+++++-.
T Consensus 183 ~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 183 DNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp TSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEec
Confidence 01121 233 3577899999 899988865
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.84 E-value=0.0091 Score=66.99 Aligned_cols=208 Identities=8% Similarity=0.045 Sum_probs=137.2
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCC----eEEEEEc--CCcEEEEEEcC-CceEEEEecCCCCccEEEEec
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSI 257 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg----~~l~tl~--~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi 257 (474)
+..+..|+|++.++++..+....+.|+.+++... .....+. -.....||+.+ ++.|..+. ...+.|.+.++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD--~~~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD--SVLGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE--TTTTEEEEEET
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe--cCCCeEEEEeC
Confidence 5677789999668888888888899999998752 2222232 24577899996 66666664 34578999998
Q ss_pred CCCeEEEEEe-ecCcceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCceEEeccccCCceEEEEEcC-CCcEEEEEc-
Q 011970 258 EDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR- 332 (474)
Q Consensus 258 ~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~--~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s- 332 (474)
. |+..+++. .....-..|++. |.++.|..+. ....|...++.......+......++..|++.| +++++.+-.
T Consensus 501 d-G~~~~~l~~~~l~~P~gIaVD-p~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 501 K-GVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp T-SSSEEEEEECTTCCEEEEEEE-TTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred C-CCeEEEEEeCCCCCcceEEEe-cCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 5 55555554 344556888886 4567777764 337899999876555445555667899999995 566666666
Q ss_pred CCcEEEEeCCCcEEEEe-ccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCC
Q 011970 333 NRTVAVWNFRGELVTSF-EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 411 (474)
Q Consensus 333 D~tIklWd~~G~ll~tl-~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~ 411 (474)
...|...|++|.-++++ .++..+. .-.+|++ +++.|.-... ..++|..-|..+|+-+.++...-
T Consensus 579 ~~~I~~~d~dG~~~~~v~~~~~~l~---~P~glav--~~~~lYwtD~----------~~~~I~~~dk~tG~~~~~l~~~l 643 (791)
T 3m0c_C 579 LHSISSIDVNGGNRKTILEDEKRLA---HPFSLAV--FEDKVFWTDI----------INEAIFSANRLTGSDVNLLAENL 643 (791)
T ss_dssp TTEEEEEETTSCSCEEEEECTTTTS---SEEEEEE--ETTEEEEEET----------TTTEEEEEETTTCCCCEEEECSC
T ss_pred CCcEEEEecCCCceEEEecCCCccC---CCCEEEE--eCCEEEEEEC----------CCCEEEEEeCCCCcceEEeecCC
Confidence 78999999987655444 3322221 1245665 3444443321 26888888888998888885443
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.82 E-value=0.0034 Score=64.24 Aligned_cols=192 Identities=13% Similarity=0.203 Sum_probs=123.6
Q ss_pred CeEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCce-------EEEEecCCC--CccEEEEec--CCCeEEEEE
Q 011970 198 GKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIM-------LLIFNRSSS--HVPLKILSI--EDGTVLKVF 266 (474)
Q Consensus 198 Gk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSpg~~-------la~~s~~s~--D~tIkLWdi--~tG~~L~tl 266 (474)
..+|++. .++-+.|+|+ +|+.+..+....+..|..-|+-. ||..+ +.. +.+|.++++ .+++ |+.+
T Consensus 41 s~ii~t~-k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as-~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 41 SKLITTN-KKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAAS-NRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp CEEEEEE-TTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEE-ECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred cEEEEEc-CCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEe-CCCCCCCeEEEEEECCCCCc-eeec
Confidence 4455554 4567999999 99999999877777777776432 33332 344 678999966 5665 5555
Q ss_pred ee-------cCcceeEEEE--EecCCC-eEEEEeCCCcEEEEEC-------CCCceEEeccccCCceEEEEEcCCCcEEE
Q 011970 267 YH-------LLHRNKKVDF--IEQFNE-KLLVKQENENLQILDV-------RNAELMEVSRTEFMTPSAFIFLYENQLFL 329 (474)
Q Consensus 267 ~~-------h~~~v~~V~F--~~~~~~-~ll~~~~D~tIkIWDv-------~tg~~~~~l~~h~~~v~sv~Fspdg~lla 329 (474)
.. -......+++ .+..+. ++.+...++.+..|++ .++++++.+.-. ..+..++..++...|.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLY 195 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEE
Confidence 22 1144566776 332343 4666788899999988 234556665433 3678888887666665
Q ss_pred EEc-CCcEEEEeCC------CcEEEEec-cCCCCcCCCCeeEEEE--CCCCC-EEEEEecCCCccccccCCCCeEEEEeC
Q 011970 330 TFR-NRTVAVWNFR------GELVTSFE-DHLLWHPDCNTNNIYI--TSDQD-LIISYCKAEPEDQWMEGSAGSINVSSI 398 (474)
Q Consensus 330 S~s-D~tIklWd~~------G~ll~tl~-gH~~~~~~~~v~svaf--SpDg~-~LaS~s~~~~~~~~~~s~DgtIklWdi 398 (474)
-+- |.-|-.++.+ ++++..+. +|... .+..+++ .+||+ ||+..|. .+.+.-++|.
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~a----DvEGLai~~~~~g~gyLivSsQ----------G~~s~~Vydr 261 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTR----DIEGLTIYYAADGKGYLMASSQ----------GNSSYAIYDR 261 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCS----CEEEEEEEECGGGCEEEEEEEG----------GGTEEEEEES
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCcccc----CcceEEEEecCCCCEEEEEEcC----------CCCEEEEEEC
Confidence 555 6544344433 34666553 33321 1577777 77777 6666664 2789999999
Q ss_pred C-CCeEEEEec
Q 011970 399 L-TGKCLAKIN 408 (474)
Q Consensus 399 ~-tG~cl~tl~ 408 (474)
. +.+.+..|.
T Consensus 262 ~~~~~~vg~f~ 272 (355)
T 3amr_A 262 QGKNKYVADFR 272 (355)
T ss_dssp STTCCEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 6 788888884
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.81 E-value=0.029 Score=62.86 Aligned_cols=230 Identities=11% Similarity=0.104 Sum_probs=145.0
Q ss_pred CCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCC-Cccceeeecc
Q 011970 106 HSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD-SGFALFESES 184 (474)
Q Consensus 106 ~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~-~~~~lf~~~~ 184 (474)
....|+..++..++....+.+ ...+..|+|.+.+..|.-+. ... +.|...++...... ....+... .
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~~lY~sD--~~~-------~~I~~~~l~g~~~~~~~~~vi~~-~ 469 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSD--LSQ-------RMICSTQLDRAHGVSSYDTVISR-D 469 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECS--CSSEEEEEEETTTTEEEEEE--TTT-------TEEEEEEC--------CEEEECS-S
T ss_pred cccceeEeeccCCcceeeecC--CCceEEEeecccCCeeEEee--ccc-------eeEEEEeccCCCCCcceeEEEec-C
Confidence 345567777765544433332 34578999999766665432 222 34555554322110 01123332 4
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc---CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCC
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS---DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 260 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~---~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG 260 (474)
+..|..|+++..++++..+-...+.|.+.++.. +...++- ......||+.| ++.|..+.. +....|...++ +|
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG-~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~-g~~~~I~~~~~-dG 546 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDW-GTPAKIKKGGL-NG 546 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEEC-SSSCEEEEEET-TS
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCC-CeEEEEEeCCCCCcceEEEecCCCCEEEecC-CCCCeEEEEec-CC
Confidence 677889999866668888888899999999864 4344432 24688999997 566666543 22256888887 56
Q ss_pred eEEEEEe-ecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEeccc--cCCceEEEEEcCCCcEEEEEc-CCc
Q 011970 261 TVLKVFY-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRT--EFMTPSAFIFLYENQLFLTFR-NRT 335 (474)
Q Consensus 261 ~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~--h~~~v~sv~Fspdg~llaS~s-D~t 335 (474)
...+++. ....+-..|++. +.+++|..+ .....|...|+.......+..+ ....+.+|++ .+++++.+-. .++
T Consensus 547 ~~~~~lv~~~l~~P~GLavD-~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav-~~~~lYwtD~~~~~ 624 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLD-LLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEA 624 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE-ETTEEEEEETTTTE
T ss_pred CceEEEEeCCCCCceEEEEe-cCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE-eCCEEEEEECCCCE
Confidence 6555554 334566788876 456777776 5678999999876555444433 3456778877 4557888887 888
Q ss_pred EEEEeC-CCcEEEEeccC
Q 011970 336 VAVWNF-RGELVTSFEDH 352 (474)
Q Consensus 336 IklWd~-~G~ll~tl~gH 352 (474)
|..-|. +|+-+.++...
T Consensus 625 I~~~dk~tG~~~~~l~~~ 642 (791)
T 3m0c_C 625 IFSANRLTGSDVNLLAEN 642 (791)
T ss_dssp EEEEETTTCCCCEEEECS
T ss_pred EEEEeCCCCcceEEeecC
Confidence 988886 68776666543
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.76 E-value=0.00012 Score=80.75 Aligned_cols=205 Identities=8% Similarity=0.067 Sum_probs=129.2
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCC----CeEEEEEcC--CcEEEEEEcC-CceEEEEecCCCCccEEEEec
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----YTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSI 257 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~t----g~~l~tl~~--~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi 257 (474)
+..|..|+|++.++.+..+-...+.|+.+++.+ ......+.. .....||+.+ ++.|..+ +...+.|.+.++
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~t--D~~~~~I~v~d~ 482 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWT--DSVLGTVSVADT 482 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEEC--CTTTSCEEEEBS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEE--eccCCeEEEEec
Confidence 445668999855677777777788999999875 122222221 2356788884 6666554 234578999997
Q ss_pred CCCeEEEEEe-ecCcceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCceEEeccccCCceEEEEEcCC-CcEEEEEc-
Q 011970 258 EDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR- 332 (474)
Q Consensus 258 ~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~--~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspd-g~llaS~s- 332 (474)
.. ..+.++. .....-..|++. |.++.|..+. ..+.|...++.......+.......+..++|+|+ ++++++-+
T Consensus 483 dg-~~~~~l~~~~~~~P~giavD-p~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 483 KG-VKRKTLFREQGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp SS-CCEEEECCCSSCCCCCEECC-SSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred CC-CceEEEEeCCCCCcceEEEc-cCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 64 4444443 223444667765 4466666654 2378888887644333333445568899999986 66777766
Q ss_pred CCcEEEEeCCCcEEEEeccC--CCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecC
Q 011970 333 NRTVAVWNFRGELVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 409 (474)
Q Consensus 333 D~tIklWd~~G~ll~tl~gH--~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~g 409 (474)
.++|...|++|.-.+++... ...+| .+|++..+ .++++.. ..+.|...|..+|+.+++|..
T Consensus 561 ~~~I~~~d~dG~~~~~~~~~~~~~~~P----~glavd~~-~lywtd~-----------~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 561 LHSISSIDVNGGNRKTILEDEKRLAHP----FSLAVFED-KVFWTDI-----------INEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp TTEEEEECSSSSCCEEECCCSSSCSSC----CCCEEETT-EEEEECS-----------TTTCEEEEETTTEEEEECCCT
T ss_pred CCeEEEEccCCCceEEEEecCCcCCCc----eEeEEECC-EEEEEeC-----------CCCeEEEEEccCCCceEEeec
Confidence 88999999987654444321 11222 35666544 4444432 268899999889999988854
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.73 E-value=0.0077 Score=65.50 Aligned_cols=206 Identities=15% Similarity=0.154 Sum_probs=134.4
Q ss_pred ccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeE-EEEEcC--CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCC
Q 011970 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM-LYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 260 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~-l~tl~~--~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG 260 (474)
+..|..|+|++.+|.+..+-...+.|+.+++..... ...+.. .....+|+.+ ++.|..+. ...+.|.+-++. |
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d--~~~~~I~v~~~d-G 115 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTD--SETNRIEVSNLD-G 115 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETT-S
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEe--CCCCEEEEEECC-C
Confidence 556778999976888888877888999999875532 233332 5788999997 77777664 446789999975 5
Q ss_pred eEEEEEe-ecCcceeEEEEEecCCCeEEEEeC--CCcEEEEECCCCceEEeccccCCceEEEEEcCC-CcEEEEEc-CCc
Q 011970 261 TVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQE--NENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-NRT 335 (474)
Q Consensus 261 ~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~~--D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspd-g~llaS~s-D~t 335 (474)
+..+++. .....-+.|++. |.+++|..+.. ...|..-++..............++..+++.|+ ++++.+-. .+.
T Consensus 116 ~~~~~l~~~~l~~P~~Iavd-p~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~ 194 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALD-PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF 194 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCCCceEEEe-cCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe
Confidence 5554554 444556788886 45677777653 456666676644444444445678999999975 66666666 889
Q ss_pred EEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 336 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 336 IklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
|...|++|.-.+.+......+| .+|++.+| .+..+-. ..++|..-|..+|+-+..+...
T Consensus 195 I~~~~~dG~~~~~~~~~~~~~P----~gi~~~~~-~ly~td~-----------~~~~V~~~d~~tg~~~~~i~~~ 253 (619)
T 3s94_A 195 IHKSNLDGTNRQAVVKGSLPHP----FALTLFED-ILYWTDW-----------STHSILACNKYTGEGLREIHSD 253 (619)
T ss_dssp EEEESSSCCEEC---------C----CCEEESSS-EEEEECT-----------TTCSEEEEESSSCCCCEECCSC
T ss_pred EEEecCCCCccEEEEeCCCCCc----eEEEEeCC-EEEEecC-----------CCCEEEEEECCCCcccEEEecC
Confidence 9999998765554432122332 46788666 4444422 2688999999899887777554
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.67 E-value=0.0076 Score=60.41 Aligned_cols=219 Identities=10% Similarity=0.109 Sum_probs=117.4
Q ss_pred EEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCC--CccceeeeccccCceEEEEeCCC----CeEEEEec
Q 011970 132 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD--SGFALFESESLKWPGFVEFDDVN----GKVLTYSA 205 (474)
Q Consensus 132 i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~--~~~~lf~~~~~~~~~~V~Fs~~n----Gk~LaS~s 205 (474)
-+.++|.|||..+++ . .. ..|.+.+ .|+.. ...+++.. ....+..|+|+ || |.+.++-+
T Consensus 33 P~~ia~~pdG~l~V~-e---~~-------g~I~~i~--~g~~~~~~~~~v~~~-g~~~p~gia~~-pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-E---RP-------GRIRLFR--EGRLSTYAELSVYHR-GESGLLGLALH-PRFPQEPYVYAYRT 97 (352)
T ss_dssp EEEEEECTTSCEEEE-E---TT-------TEEEEEE--TTEEEEEEECCCCCS-TTCSEEEEEEC-TTTTTSCEEEEEEE
T ss_pred ceEEEEcCCCeEEEE-e---CC-------CeEEEEE--CCCccEeecceEeec-CCCCceeEEEC-CCCCCCCEEEEEEe
Confidence 589999999997665 1 11 2344333 45421 11112221 24467789998 55 77666655
Q ss_pred CC-----CcEEEeecCCCe-----EEE-EEc--C---CcEEEEEEcCCceEEEEecCCCC-----------ccEEEEecC
Q 011970 206 QD-----SIYKVFDLKNYT-----MLY-SIS--D---KHVQEIKISPGIMLLIFNRSSSH-----------VPLKILSIE 258 (474)
Q Consensus 206 ~D-----~tiKlWdl~tg~-----~l~-tl~--~---~~V~~vafSpg~~la~~s~~s~D-----------~tIkLWdi~ 258 (474)
.+ ..|..+++.+++ .+. .+. . +.-..++|.|++.|.++.....+ +.|.-.+.
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~- 176 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTP- 176 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECT-
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcC-
Confidence 43 567778877542 222 243 1 34568999997777776422211 23333343
Q ss_pred CCe-------------EEEEEe-ecCcceeEEEEEecCCCeEEEEe--CCC-------cEEEEECCCCc-----------
Q 011970 259 DGT-------------VLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ--ENE-------NLQILDVRNAE----------- 304 (474)
Q Consensus 259 tG~-------------~L~tl~-~h~~~v~~V~F~~~~~~~ll~~~--~D~-------tIkIWDv~tg~----------- 304 (474)
+|+ ....+. +| ..-+.++|.+ +++.|.++. .+. .|.+. ..|.
T Consensus 177 dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~-~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~ 252 (352)
T 2ism_A 177 EGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHP-KTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRG 252 (352)
T ss_dssp TSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECT-TTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCC
T ss_pred CCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEEC-CCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCC
Confidence 231 111121 22 2346788864 344555542 232 23332 2222
Q ss_pred -------eEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEeCC--CcE-----EEEeccCCCCcCCCCeeEEEECCC
Q 011970 305 -------LMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR--GEL-----VTSFEDHLLWHPDCNTNNIYITSD 369 (474)
Q Consensus 305 -------~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd~~--G~l-----l~tl~gH~~~~~~~~v~svafSpD 369 (474)
.+..+ .+...+..++| ++|.++++.- .+.|..-+++ +.. ...+-+-.. ....|++.||
T Consensus 253 ~~~~~~~p~~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~-----rp~~v~~~pd 325 (352)
T 2ism_A 253 NDPRYRDPLYFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFG-----RLREVQVGPD 325 (352)
T ss_dssp CCTTSCCCSEEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSC-----CEEEEEECTT
T ss_pred CCCCCcCCeEec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCC-----CeeEEEECCC
Confidence 11222 22346778888 7899888876 7777777764 321 122221111 2689999999
Q ss_pred CCEEEEEe
Q 011970 370 QDLIISYC 377 (474)
Q Consensus 370 g~~LaS~s 377 (474)
|.+.++..
T Consensus 326 G~lyv~~~ 333 (352)
T 2ism_A 326 GALYVTTS 333 (352)
T ss_dssp SCEEEEEC
T ss_pred CcEEEEEe
Confidence 99988754
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.67 E-value=0.00013 Score=80.37 Aligned_cols=184 Identities=10% Similarity=0.019 Sum_probs=114.0
Q ss_pred CCCcEEEeecCCCeEEEEEc-CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCC----CeEEEEEeecCcceeEEEEE
Q 011970 206 QDSIYKVFDLKNYTMLYSIS-DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIED----GTVLKVFYHLLHRNKKVDFI 279 (474)
Q Consensus 206 ~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~t----G~~L~tl~~h~~~v~~V~F~ 279 (474)
....|++-++.+++....+. ...+..|+|++ +++|..+. ...+.|+.+++.+ ......+.........|++.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD--~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECC--TTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEe--cCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 44678888888766544443 24677899996 66666553 3356788888865 12111121112233456654
Q ss_pred ecCCCeEEEE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcCC-CcEEEEEc-C-CcEEEEeCCCcEEEEeccCCCC
Q 011970 280 EQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-N-RTVAVWNFRGELVTSFEDHLLW 355 (474)
Q Consensus 280 ~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspd-g~llaS~s-D-~tIklWd~~G~ll~tl~gH~~~ 355 (474)
+.++.|..+ ...+.|.+.|+.......+.......+..+++.|+ |.++.+-. . ++|...+++|...+.+-.....
T Consensus 462 -~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~ 540 (699)
T 1n7d_A 462 -WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 540 (699)
T ss_dssp -CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS
T ss_pred -eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC
Confidence 235566665 56789999998766555554545567899999984 66666654 3 7888888888766555322222
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEe
Q 011970 356 HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 356 ~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl 407 (474)
. -+.|+|+|+++.|.-+.. ..+.|...|+. |.-.+++
T Consensus 541 ~----PnGlavd~~~~~LY~aD~----------~~~~I~~~d~d-G~~~~~~ 577 (699)
T 1n7d_A 541 W----PNGITLDLLSGRLYWVDS----------KLHSISSIDVN-GGNRKTI 577 (699)
T ss_dssp S----CCCEEECTTTCCEEEEET----------TTTEEEEECSS-SSCCEEE
T ss_pred C----ccEEEEeccCCEEEEEec----------CCCeEEEEccC-CCceEEE
Confidence 2 378999998665544322 26789999974 5444444
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.64 E-value=0.079 Score=57.64 Aligned_cols=227 Identities=11% Similarity=0.109 Sum_probs=148.2
Q ss_pred CCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccc
Q 011970 106 HSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESL 185 (474)
Q Consensus 106 ~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~ 185 (474)
..+.|+.-++++.+....+....-.....|+|.+.++.|--+. ... +.|...++ .|.... .+... .+
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD--~~~-------~~I~r~~~-~g~~~~--~v~~~-g~ 79 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTD--ISL-------KTISRAFM-NGSALE--HVVEF-GL 79 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEE--TTT-------TEEEEEET-TSCSCE--EEECS-SC
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEE--CCC-------CeEEEEEC-CCCCcE--EEEeC-CC
Confidence 5567778887765543333322224578999999887765432 222 34544453 343211 23332 25
Q ss_pred cCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc---CCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe
Q 011970 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS---DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 261 (474)
Q Consensus 186 ~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~---~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~ 261 (474)
..|..++++..+|++..+-...+.|.+-++.... ..++- -..-.+|++.| ++.|..+.. +....|...++ +|.
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~-g~~~~I~r~~~-dG~ 156 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEW-GGKPKIDRAAM-DGS 156 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEEC-SSSCEEEEEET-TSC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCC-CCCCEEEEEeC-CCC
Confidence 5788999986678888888888999999986443 23332 24678999998 666666543 22346777776 455
Q ss_pred EEEEEeecCcceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEE
Q 011970 262 VLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVW 339 (474)
Q Consensus 262 ~L~tl~~h~~~v~~V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklW 339 (474)
...++.....+-..|++. +++++|..+ ...+.|...|+..+.. +++......+.++++.. +.++.|-. .+.|..-
T Consensus 157 ~~~~l~~~~~~P~GlalD-~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 157 ERTTLVPNVGRANGLTID-YAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERA 233 (628)
T ss_dssp SCEEEECSCSSEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred ceEEEECCCCCcceEEEc-cccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEE
Confidence 455554444566788886 556777777 5788999999876544 55555666788888754 78888887 8899999
Q ss_pred eC-CCcEEEEecc
Q 011970 340 NF-RGELVTSFED 351 (474)
Q Consensus 340 d~-~G~ll~tl~g 351 (474)
|. +|+-.+.+..
T Consensus 234 dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 234 NKTSGQNRTIIQG 246 (628)
T ss_dssp ETTTCCSCEEEEC
T ss_pred ECCCCCceEEEec
Confidence 96 5775555544
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.63 E-value=0.036 Score=60.31 Aligned_cols=188 Identities=12% Similarity=0.084 Sum_probs=124.8
Q ss_pred EEEEecCCCcEEEeecCCCeEEEEEc--C-CcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeE
Q 011970 200 VLTYSAQDSIYKVFDLKNYTMLYSIS--D-KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK 275 (474)
Q Consensus 200 ~LaS~s~D~tiKlWdl~tg~~l~tl~--~-~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~ 275 (474)
+|..+ ....|+.-|+++......+. + .....|+|.+ ++.+..+. ...+.|..+++..+.....+.........
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD--~~~~~I~r~~~~g~~~~~v~~~g~~~P~G 84 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTD--ISLKTISRAFMNGSALEHVVEFGLDYPEG 84 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEE--CCCCeEEEEECCCCCcEEEEeCCCCCcce
Confidence 34433 45678888988655444443 2 4788999997 66666654 34578988988654443334322345567
Q ss_pred EEEEecCCCeEEEE-eCCCcEEEEECCCCceEEeccccCCceEEEEEcC-CCcEEEEEc--CCcEEEEeCCCcEEEEecc
Q 011970 276 VDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR--NRTVAVWNFRGELVTSFED 351 (474)
Q Consensus 276 V~F~~~~~~~ll~~-~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s--D~tIklWd~~G~ll~tl~g 351 (474)
+++. +.++.|..+ ...+.|.+-|+...............+..+++.| +|.++.|-. ...|...+++|...+.+-.
T Consensus 85 lAvD-~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~ 163 (628)
T 4a0p_A 85 MAVD-WLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP 163 (628)
T ss_dssp EEEE-TTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEE-eCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC
Confidence 7775 346777665 5788999999876554333445667899999997 788888863 5688888888776555544
Q ss_pred CCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEe
Q 011970 352 HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 407 (474)
Q Consensus 352 H~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl 407 (474)
...+ -+.|++.++++.|.-+.. ..+.|...|+. |.-...+
T Consensus 164 ~~~~-----P~GlalD~~~~~LY~aD~----------~~~~I~~~d~d-G~~~~v~ 203 (628)
T 4a0p_A 164 NVGR-----ANGLTIDYAKRRLYWTDL----------DTNLIESSNML-GLNREVI 203 (628)
T ss_dssp SCSS-----EEEEEEETTTTEEEEEET----------TTTEEEEEETT-SCSCEEE
T ss_pred CCCC-----cceEEEccccCEEEEEEC----------CCCEEEEEcCC-CCceEEe
Confidence 4344 479999998777765532 36789888874 4333444
No 299
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.60 E-value=0.0065 Score=59.21 Aligned_cols=190 Identities=14% Similarity=0.151 Sum_probs=119.7
Q ss_pred eecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEE
Q 011970 124 LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTY 203 (474)
Q Consensus 124 l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS 203 (474)
|.|-. +-+-.++|+|++++|.+++. . + ..+-.-|.. |+....+++-. ..-+..|++. ++|.++++
T Consensus 22 l~g~~-~~lSGla~~~~~~~L~aV~d--~-~------~~I~~ld~~-g~v~~~i~l~g---~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 22 IAGIT-NNISSLTWSAQSNTLFSTIN--K-P------AAIVEMTTN-GDLIRTIPLDF---VKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp CTTCC-SCEEEEEEETTTTEEEEEEE--T-T------EEEEEEETT-CCEEEEEECSS---CSSEEEEEEC-STTEEEEE
T ss_pred CCCcc-cCcceeEEeCCCCEEEEEEC--C-C------CeEEEEeCC-CCEEEEEecCC---CCChHHeEEe-CCCEEEEE
Confidence 44433 34999999999999988763 2 2 344444544 87655443211 2345679997 78988777
Q ss_pred ecCCCcEEEeecCCCeE---EEEE--c------CCcEEEEEEcC-CceEEEEecCCCCccEEEEecC---CCeEEEEEee
Q 011970 204 SAQDSIYKVFDLKNYTM---LYSI--S------DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIE---DGTVLKVFYH 268 (474)
Q Consensus 204 ~s~D~tiKlWdl~tg~~---l~tl--~------~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~---tG~~L~tl~~ 268 (474)
.-.++.+-+.++..... +... . ......|+++| +++|.++... .+..||.+. ++..+..+..
T Consensus 87 ~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~---~p~~i~~~~g~~~~~~l~i~~~ 163 (255)
T 3qqz_A 87 DERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK---NPIEVYKVNGLLSSNELHISKD 163 (255)
T ss_dssp ETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES---SSEEEEEEESTTCSSCCEEEEC
T ss_pred ECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc---CCceEEEEcccccCCceeeecc
Confidence 66778888888764331 2222 1 12458999998 5577666432 355565553 2222232321
Q ss_pred -------cCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEe--cc-cc------CCceEEEEEcCCCcEEEEEc
Q 011970 269 -------LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV--SR-TE------FMTPSAFIFLYENQLFLTFR 332 (474)
Q Consensus 269 -------h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~--l~-~h------~~~v~sv~Fspdg~llaS~s 332 (474)
+......|+|.|..+..++.+++.+.|-+.|.+ |+.+.. |. +. ...+..|+|.|+|++++++-
T Consensus 164 ~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 164 KALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp HHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET
T ss_pred hhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC
Confidence 223457899987665555557899999999955 665543 33 32 24788999999999999864
No 300
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.58 E-value=0.026 Score=54.96 Aligned_cols=182 Identities=11% Similarity=0.167 Sum_probs=116.2
Q ss_pred ceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEc-C--CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCe---
Q 011970 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-D--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT--- 261 (474)
Q Consensus 188 ~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~--~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~--- 261 (474)
+..++|+|.++.+.|....++.|-.-|++ |+.+.++. + ...-.|++.+++.++++.. .+..+.+.++.+..
T Consensus 29 lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E--~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDE--RDYAIYVISLTPNSEVK 105 (255)
T ss_dssp EEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEET--TTTEEEEEEECTTCCEE
T ss_pred cceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEEC--CCCcEEEEEcCCCCeee
Confidence 44799984345555556668888888887 89888875 2 4788899998777766643 34677788775433
Q ss_pred EEEEEe-ec-----CcceeEEEEEecCCCeEEEEeCCCcEEEEECC---CCceEEec-------cccCCceEEEEEcCC-
Q 011970 262 VLKVFY-HL-----LHRNKKVDFIEQFNEKLLVKQENENLQILDVR---NAELMEVS-------RTEFMTPSAFIFLYE- 324 (474)
Q Consensus 262 ~L~tl~-~h-----~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~---tg~~~~~l-------~~h~~~v~sv~Fspd- 324 (474)
.+.... .+ ......+++. +.+++|.++.+.....||.+. ++..+..+ ..+...+++++|.|.
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d-~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYS-RQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEE-TTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeccccccccccCCcceEEEe-CCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 233332 11 1123789987 456778877665566666654 12222222 113346789999875
Q ss_pred CcEEEEEc-CCcEEEEeCCCcEEEEeccCCC------CcCCCCeeEEEECCCCCEEEE
Q 011970 325 NQLFLTFR-NRTVAVWNFRGELVTSFEDHLL------WHPDCNTNNIYITSDQDLIIS 375 (474)
Q Consensus 325 g~llaS~s-D~tIklWd~~G~ll~tl~gH~~------~~~~~~v~svafSpDg~~LaS 375 (474)
|++++.+. .+.+-..|.+|+.+..+.=... .++. -..|+|.|+|++.++
T Consensus 185 g~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~q--pEGia~d~~G~lyIv 240 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQ--AEGVAMDASGNIYIV 240 (255)
T ss_dssp TEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCS--EEEEEECTTCCEEEE
T ss_pred CeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCC--CCeeEECCCCCEEEE
Confidence 45555555 8899999999997664431111 1111 378999999998887
No 301
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.38 E-value=0.038 Score=55.36 Aligned_cols=143 Identities=12% Similarity=0.124 Sum_probs=81.7
Q ss_pred ccCceEEEEeCCCCe-EEEEecCCCcEEEeecCCCeEEE---EEc------CCcEEEEEEcC----CceEEEEecC-CC-
Q 011970 185 LKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLY---SIS------DKHVQEIKISP----GIMLLIFNRS-SS- 248 (474)
Q Consensus 185 ~~~~~~V~Fs~~nGk-~LaS~s~D~tiKlWdl~tg~~l~---tl~------~~~V~~vafSp----g~~la~~s~~-s~- 248 (474)
+..|..++|+ |||+ ++++- .++.|++++. +|.... .+. ......|+|+| ++.|.++... ..
T Consensus 17 l~~P~~i~~~-pdG~~l~V~e-~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 17 LDHPWALAFL-PDNHGMLITL-RGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp ESSEEEEEEC-STTCCEEEEE-TTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCCcEEEEEc-CCCCEEEEEe-CCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 6788899998 7999 87765 5688999984 454321 111 23578999998 4655554321 11
Q ss_pred ---CccEEEEecCCC--eE--EEE----Ee---ecCcceeEEEEEecCCCeEEEEeCC--------------CcEEEEEC
Q 011970 249 ---HVPLKILSIEDG--TV--LKV----FY---HLLHRNKKVDFIEQFNEKLLVKQEN--------------ENLQILDV 300 (474)
Q Consensus 249 ---D~tIkLWdi~tG--~~--L~t----l~---~h~~~v~~V~F~~~~~~~ll~~~~D--------------~tIkIWDv 300 (474)
...|..+++..+ ++ .++ +. ...|.-..+.|. |+| +|.++..| +.|.-.|.
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~-pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~ 171 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFD-GKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTD 171 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEEC-SSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEET
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEEC-CCC-cEEEEECCCCCCCccCCCCCCCeEEEEECC
Confidence 124555665433 11 111 21 112344679987 444 66665322 34555565
Q ss_pred CCC------------ceEEeccccCCceEEEEEcC-CCcEEEEEc
Q 011970 301 RNA------------ELMEVSRTEFMTPSAFIFLY-ENQLFLTFR 332 (474)
Q Consensus 301 ~tg------------~~~~~l~~h~~~v~sv~Fsp-dg~llaS~s 332 (474)
... ...++.......++.++|.| +|+++++-.
T Consensus 172 dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 172 QGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp TSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEec
Confidence 432 01222222223588999999 899888754
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.29 E-value=0.035 Score=56.76 Aligned_cols=171 Identities=15% Similarity=0.235 Sum_probs=108.5
Q ss_pred ccEEEEecCCCeEEEEEeecCcceeEEEEEecC---CCe--EEEEe--C--CCcEEEEEC--CCCceEEecc------cc
Q 011970 250 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQF---NEK--LLVKQ--E--NENLQILDV--RNAELMEVSR------TE 312 (474)
Q Consensus 250 ~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~---~~~--ll~~~--~--D~tIkIWDv--~tg~~~~~l~------~h 312 (474)
.-+.+.|+ +|+.|+.+.. ++...|+.-+.+ +++ +++.+ . +++|.++++ .++++..... ..
T Consensus 50 ~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 50 SGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATA 126 (355)
T ss_dssp TEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECC
T ss_pred CCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCC
Confidence 57999999 9999999974 567777775421 222 44443 4 689999966 5666544411 22
Q ss_pred CCceEEEEE--cC-CCc--EEEEEcCCcEEEEeC--------CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecC
Q 011970 313 FMTPSAFIF--LY-ENQ--LFLTFRNRTVAVWNF--------RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 379 (474)
Q Consensus 313 ~~~v~sv~F--sp-dg~--llaS~sD~tIklWd~--------~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~ 379 (474)
...++.+++ +| .|+ .+++..++.+..|++ +++++++|.--.. +..++..|....|.-+-.
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq------~EgcvvDd~~g~Lyv~eE- 199 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ------TEGMAADDEYGRLYIAEE- 199 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC------EEEEEEETTTTEEEEEET-
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC------cceEEEcCCCCeEEEecc-
Confidence 267888888 77 454 344434999999998 1357888875443 578888887777776543
Q ss_pred CCccccccCCCCeEEEEeCC-----CCeEEEEecC-CCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEE
Q 011970 380 EPEDQWMEGSAGSINVSSIL-----TGKCLAKINA-TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFY 453 (474)
Q Consensus 380 ~~~~~~~~s~DgtIklWdi~-----tG~cl~tl~g-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slaf 453 (474)
|.-|.-.|.. +++.+..+.+ |-. ..+..|++
T Consensus 200 ----------d~GIw~~da~p~~~~~~~~v~~~~~g~l~---------------------------------aDvEGLai 236 (355)
T 3amr_A 200 ----------DEAIWKFSAEPDGGSNGTVIDRADGRHLT---------------------------------RDIEGLTI 236 (355)
T ss_dssp ----------TTEEEEEECSTTSCSCCEEEEEBSSSSBC---------------------------------SCEEEEEE
T ss_pred ----------cceEEEEeCCcCCCCCceEEEEecCCccc---------------------------------cCcceEEE
Confidence 4334333432 4566665521 110 16777776
Q ss_pred --cCCCC-EEEEEc-CCCcEEEcc
Q 011970 454 --DEERN-EIYTGN-RHGLVHVWS 473 (474)
Q Consensus 454 --SpDg~-~LaSgs-~DgtVklWd 473 (474)
.+||+ +|+..+ .+++..++|
T Consensus 237 ~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 237 YYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EECGGGCEEEEEEEGGGTEEEEEE
T ss_pred EecCCCCEEEEEEcCCCCEEEEEE
Confidence 67777 455444 677888876
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.26 E-value=0.18 Score=51.10 Aligned_cols=144 Identities=15% Similarity=0.125 Sum_probs=84.8
Q ss_pred cccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeE--EEEEc------CCcEEEEEEcCC----ceEEE-EecCCCCc
Q 011970 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSIS------DKHVQEIKISPG----IMLLI-FNRSSSHV 250 (474)
Q Consensus 184 ~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~--l~tl~------~~~V~~vafSpg----~~la~-~s~~s~D~ 250 (474)
.+..|+.++|. |||.+|++--..+.|++++..+|+. +..+. ......|+|+|+ +.|.. .+.. .+.
T Consensus 30 gL~~P~~ia~~-pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~-~~~ 107 (347)
T 3das_A 30 GLNSPWGLAPL-PGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA-SDN 107 (347)
T ss_dssp CCSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS-SSE
T ss_pred CCCCceEEEEc-CCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC-CCC
Confidence 37788899998 7999998876689999998777764 33332 246889999983 55543 3322 234
Q ss_pred cEEEEecCCC----------eE-EEEEe-ecCcceeEEEEEecCCCeEEEE-eC-------------CCcEEEEECCCCc
Q 011970 251 PLKILSIEDG----------TV-LKVFY-HLLHRNKKVDFIEQFNEKLLVK-QE-------------NENLQILDVRNAE 304 (474)
Q Consensus 251 tIkLWdi~tG----------~~-L~tl~-~h~~~v~~V~F~~~~~~~ll~~-~~-------------D~tIkIWDv~tg~ 304 (474)
.|--|....+ +. +..+. ...|.-..+.|. ++| +|.++ ++ -+.|--.|....-
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg-pDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG-PDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC-TTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC-CCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 4544554431 22 23343 223556789997 455 55554 32 1222222433210
Q ss_pred -------eEEec-cccCCceEEEEEcCCCcEEEEEc
Q 011970 305 -------LMEVS-RTEFMTPSAFIFLYENQLFLTFR 332 (474)
Q Consensus 305 -------~~~~l-~~h~~~v~sv~Fspdg~llaS~s 332 (474)
-.+++ .||- .+..++|.|+|+++++-.
T Consensus 186 p~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 186 APGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp CTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEEC
T ss_pred cCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEec
Confidence 01121 2343 467899999999988754
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.17 E-value=0.047 Score=54.85 Aligned_cols=138 Identities=11% Similarity=0.019 Sum_probs=85.0
Q ss_pred CcEEEEEEcCCceEEEEecCCCCccEEEEecCCCe-EEEEEe---ecCcceeEEEEEecC---CCeEEEEeC----C---
Q 011970 227 KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT-VLKVFY---HLLHRNKKVDFIEQF---NEKLLVKQE----N--- 292 (474)
Q Consensus 227 ~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~-~L~tl~---~h~~~v~~V~F~~~~---~~~ll~~~~----D--- 292 (474)
..-+.++|.|++.|+++.. ++.|++++ .+|+ .+..+. ........|+|. |+ ++.|.++.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~e~---~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~-pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTER---PGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALH-PEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEEET---TTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeEEEEeC---CCEEEEEe-CCCceEeeccceeecCCCceeeEEeC-CCCCcCCEEEEEEeccCCCCCc
Confidence 4578999998777777754 37888887 5776 222221 123456889987 44 567776532 3
Q ss_pred -CcEEEEECCCC--c------eEEec-cccCCceEEEEEcCCCcEEEEEcC--------------CcEEEEeCCCc----
Q 011970 293 -ENLQILDVRNA--E------LMEVS-RTEFMTPSAFIFLYENQLFLTFRN--------------RTVAVWNFRGE---- 344 (474)
Q Consensus 293 -~tIkIWDv~tg--~------~~~~l-~~h~~~v~sv~Fspdg~llaS~sD--------------~tIklWd~~G~---- 344 (474)
..|..++...+ . ++..+ .+.......++|.|||.++++..| +.|.-.|.+|+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56777777654 1 11211 122234577999999999998543 34444444564
Q ss_pred ------EEEEeccCCCCcCCCCeeEEEECC-CCCEEEEE
Q 011970 345 ------LVTSFEDHLLWHPDCNTNNIYITS-DQDLIISY 376 (474)
Q Consensus 345 ------ll~tl~gH~~~~~~~~v~svafSp-Dg~~LaS~ 376 (474)
.+. -.||.. .+.++|.| +|++.++-
T Consensus 184 npf~~~~i~-a~G~rn------p~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 184 NPFPNSPIW-SYGHRN------PQGIDWHRASGVMVATE 215 (354)
T ss_dssp SSSTTCCEE-EECCSC------CCEEEECTTTCCEEEEE
T ss_pred CCCCCCcEE-EEccCC------cceEEEeCCCCCEEEEe
Confidence 121 235544 36899999 78887764
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.82 E-value=0.14 Score=51.98 Aligned_cols=171 Identities=9% Similarity=0.119 Sum_probs=99.9
Q ss_pred cCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEE-EEcC--------CcEEEEEE---cCCceEEEEecCCCCccEE
Q 011970 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-SISD--------KHVQEIKI---SPGIMLLIFNRSSSHVPLK 253 (474)
Q Consensus 186 ~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~-tl~~--------~~V~~vaf---Spg~~la~~s~~s~D~tIk 253 (474)
-+|..+.|++.+|.+++|.-..++|-.||...+.... .+.+ ..+..|.+ -|+++|++....+
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~------ 86 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA------ 86 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET------
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc------
Confidence 4677899986789999988899999999987664332 2322 02455666 3444443321100
Q ss_pred EEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECC---CCceEEe--ccc-----------cCCceE
Q 011970 254 ILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR---NAELMEV--SRT-----------EFMTPS 317 (474)
Q Consensus 254 LWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~---tg~~~~~--l~~-----------h~~~v~ 317 (474)
.+|... +.. -+.+.-|..+|+. +++.+.. |.+ ....+.
T Consensus 87 ----------------------~af~~~-g~~---~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~n 140 (334)
T 2p9w_A 87 ----------------------KSFNFA-DQS---SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVV 140 (334)
T ss_dssp ----------------------TTTCTT-SCC---SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEE
T ss_pred ----------------------cccccc-ccc---cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCc
Confidence 000000 000 0124455566666 5554322 211 122467
Q ss_pred EEEEcCCCcEEEEEc-C-CcEEEEeCCCcEEEEec-cCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEE
Q 011970 318 AFIFLYENQLFLTFR-N-RTVAVWNFRGELVTSFE-DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSIN 394 (474)
Q Consensus 318 sv~Fspdg~llaS~s-D-~tIklWd~~G~ll~tl~-gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIk 394 (474)
.++.-++|+..++++ - +.|-..+.+|+.+..+. ........+..+.|+++|||++|+... + ++.+-
T Consensus 141 DvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~----------~-~g~L~ 209 (334)
T 2p9w_A 141 QSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG----------G-PRALT 209 (334)
T ss_dssp EEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEES----------S-SSSEE
T ss_pred eeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEc----------C-CCeEE
Confidence 888899999999888 7 77666666687555442 111111123357999999999888753 3 78888
Q ss_pred EEeCC
Q 011970 395 VSSIL 399 (474)
Q Consensus 395 lWdi~ 399 (474)
-.|+.
T Consensus 210 ~fD~~ 214 (334)
T 2p9w_A 210 AFDVS 214 (334)
T ss_dssp EEECS
T ss_pred EEcCC
Confidence 88875
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.37 E-value=1 Score=45.62 Aligned_cols=181 Identities=13% Similarity=0.126 Sum_probs=108.8
Q ss_pred CceEEEEeCCCCeEEEEec------------CCCcEEEeecCC--CeEE-EEEcC-------CcEEEEEEcC---C-ceE
Q 011970 187 WPGFVEFDDVNGKVLTYSA------------QDSIYKVFDLKN--YTML-YSISD-------KHVQEIKISP---G-IML 240 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s------------~D~tiKlWdl~t--g~~l-~tl~~-------~~V~~vafSp---g-~~l 240 (474)
.+..++.. |+|..+++++ .+|.|-++|+++ ++.. ..+.+ -.-..|.+.+ | ..|
T Consensus 51 G~EDi~~~-~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEIL-PNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEEC-TTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEc-CCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 35577786 6888877763 688899999873 3421 12222 2456666643 3 245
Q ss_pred EEEecCCCCccEEEEecCCC-e---EEEEEeec-CcceeEEEEEecCCCeEEEEeC----C------------CcEEEEE
Q 011970 241 LIFNRSSSHVPLKILSIEDG-T---VLKVFYHL-LHRNKKVDFIEQFNEKLLVKQE----N------------ENLQILD 299 (474)
Q Consensus 241 a~~s~~s~D~tIkLWdi~tG-~---~L~tl~~h-~~~v~~V~F~~~~~~~ll~~~~----D------------~tIkIWD 299 (474)
.+........+|.||++..+ . .+.++.+. ..+...+.+.+ ++.+.++.. | .+=+||-
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~--~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG--PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE--TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC--CCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 55544434578999887653 2 34455542 23457787764 345555432 1 2334554
Q ss_pred CCCCceEEeccccCCceEEEEEcCCCcEEE-EEc-CCcEEEEeCC--CcEE--EEeccCCCCcCCCCeeEEEECC-CCCE
Q 011970 300 VRNAELMEVSRTEFMTPSAFIFLYENQLFL-TFR-NRTVAVWNFR--GELV--TSFEDHLLWHPDCNTNNIYITS-DQDL 372 (474)
Q Consensus 300 v~tg~~~~~l~~h~~~v~sv~Fspdg~lla-S~s-D~tIklWd~~--G~ll--~tl~gH~~~~~~~~v~svafSp-Dg~~ 372 (474)
+..+++.. +......+..++||||++.|. +-+ .++|..++++ |++. +.|. .... -.++++.+ +|.+
T Consensus 208 ~d~~~~~~-~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~--~~g~----PDGi~vD~e~G~l 280 (355)
T 3sre_A 208 YSPNDVRV-VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS--FDTL----VDNISVDPVTGDL 280 (355)
T ss_dssp ECTTCCEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSE----EEEEEECTTTCCE
T ss_pred EECCeEEE-eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe--CCCC----CceEEEeCCCCcE
Confidence 44455443 334456789999999997554 445 8899999984 6542 3452 1222 36899999 5999
Q ss_pred EEEEe
Q 011970 373 IISYC 377 (474)
Q Consensus 373 LaS~s 377 (474)
.+++.
T Consensus 281 wva~~ 285 (355)
T 3sre_A 281 WVGCH 285 (355)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88654
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.32 E-value=0.52 Score=47.85 Aligned_cols=138 Identities=12% Similarity=0.101 Sum_probs=82.6
Q ss_pred CccEEEEecC--CCeEEE-EEee-----cCcceeEEEEEec-CCC-eEEEE-e--CCCcEEEEECCCC--c--eEEeccc
Q 011970 249 HVPLKILSIE--DGTVLK-VFYH-----LLHRNKKVDFIEQ-FNE-KLLVK-Q--ENENLQILDVRNA--E--LMEVSRT 311 (474)
Q Consensus 249 D~tIkLWdi~--tG~~L~-tl~~-----h~~~v~~V~F~~~-~~~-~ll~~-~--~D~tIkIWDv~tg--~--~~~~l~~ 311 (474)
++.|-++|.. +++... .+.+ ..-+--.+++.+. ++. +|.+. . .+.+|.||++..+ . ++....+
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g 161 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 161 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc
Confidence 5668888876 333211 2222 1123456666542 333 45554 2 4789999887653 2 2233333
Q ss_pred -cCCceEEEEEcCCCcEEEEEc----C------------CcEEEEeCC-CcEEEEeccCCCCcCCCCeeEEEECCCCCEE
Q 011970 312 -EFMTPSAFIFLYENQLFLTFR----N------------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI 373 (474)
Q Consensus 312 -h~~~v~sv~Fspdg~llaS~s----D------------~tIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~L 373 (474)
....+..+++.++|.+.++.. | .+=+||-++ |++..-.++-.. -|.|+|||||++|
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~------pNGia~spDg~~l 235 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDF------ANGINISPDGKYV 235 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEESS------EEEEEECTTSSEE
T ss_pred CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecCCcc------cCcceECCCCCEE
Confidence 346789999999999988853 2 234566665 554433333222 4899999999887
Q ss_pred EEEecCCCccccccCCCCeEEEEeCC-CCe
Q 011970 374 ISYCKAEPEDQWMEGSAGSINVSSIL-TGK 402 (474)
Q Consensus 374 aS~s~~~~~~~~~~s~DgtIklWdi~-tG~ 402 (474)
.-+.. ..+.|..+++. +|+
T Consensus 236 Yvadt----------~~~~I~~~~~~~~g~ 255 (355)
T 3sre_A 236 YIAEL----------LAHKIHVYEKHANWT 255 (355)
T ss_dssp EEEEG----------GGTEEEEEEECTTSC
T ss_pred EEEeC----------CCCeEEEEEECCCCc
Confidence 76532 36889999985 344
No 308
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.04 E-value=1.5 Score=44.33 Aligned_cols=229 Identities=12% Similarity=0.119 Sum_probs=119.0
Q ss_pred EEEEEee--ccEEEEeeCCCeEEeeeccccce--eeEee---cCCCceEEEEEEeeC----CCEEEEEEeecCCCcccee
Q 011970 91 VIEIVAA--RDIVFALAHSGVCAAFSRETNRR--ICFLN---VSPDEVIRSLFYNKN----NDSLITVSVYASDNFSSLK 159 (474)
Q Consensus 91 V~~i~~s--~~~las~s~dgtiklW~~~tg~~--l~~l~---g~~~~~i~sv~fspd----g~~Lis~S~~~s~d~s~Lk 159 (474)
-+.|+|. |.++++--..|.|++++..+|+. +..+. .........|+|+|| |...++-+ ....+
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt-~~~~~----- 107 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT-SASDN----- 107 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE-CSSSE-----
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe-cCCCC-----
Confidence 3566666 66666655599999998666654 22221 112456789999995 54334322 11222
Q ss_pred eeEEEEeEeccC-----CCCCccceeee---ccccCceEEEEeCCCCeEEEEecC--------C---CcEEEeecC-CCe
Q 011970 160 CRSTKIEYIRRG-----KPDSGFALFES---ESLKWPGFVEFDDVNGKVLTYSAQ--------D---SIYKVFDLK-NYT 219 (474)
Q Consensus 160 ~~~~~iw~i~~G-----~~~~~~~lf~~---~~~~~~~~V~Fs~~nGk~LaS~s~--------D---~tiKlWdl~-tg~ 219 (474)
+-.|+-+ ..+ ++.....++.. ....+...++|+ |||++.++-+. | ..=|||.+. .|+
T Consensus 108 -~v~R~~~-~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg-pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 108 -RIVRMLY-DEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG-PDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp -EEEEEEB-CTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC-TTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred -EEEEEEe-CCCCcccccCCCcEEEEEcCCCCCCccCccccCC-CCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 2233222 222 22222234432 111233469998 79998777432 1 122344433 232
Q ss_pred ----------EEEEEcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeE------------------EEEEeecCc
Q 011970 220 ----------MLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV------------------LKVFYHLLH 271 (474)
Q Consensus 220 ----------~l~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~------------------L~tl~~h~~ 271 (474)
.++..--.+.+.++|.|++.|.+... +.|..=.|--++.|.- +..+..+..
T Consensus 185 ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~-g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ 263 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEF-GQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEA 263 (347)
T ss_dssp BCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEEC-CSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTC
T ss_pred ccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEec-CCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCC
Confidence 23333234678899998666666542 3333222222222221 111211111
Q ss_pred ceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCc----eEEeccccCCceEEEEEcCCCcEEEEEc
Q 011970 272 RNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAE----LMEVSRTEFMTPSAFIFLYENQLFLTFR 332 (474)
Q Consensus 272 ~v~~V~F~~~~~~~ll~~~-~D~tIkIWDv~tg~----~~~~l~~h~~~v~sv~Fspdg~llaS~s 332 (474)
.-..++|. ++.++.+. ..+.|.-..+..+. ....+.+....+..|++.|||.++++..
T Consensus 264 ap~G~~~~---~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 264 SPSGIAYA---EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CEEEEEEE---TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCcceEEE---cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 23567776 35666654 45555555655442 2345666667899999999999988764
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.02 E-value=0.41 Score=48.44 Aligned_cols=158 Identities=10% Similarity=0.122 Sum_probs=98.7
Q ss_pred eEEEEEecCCCeEEEEe-CCCcEEEEECCCCceEEecccc-------CCceEEEEE---cCCCcEEEEEc----------
Q 011970 274 KKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSRTE-------FMTPSAFIF---LYENQLFLTFR---------- 332 (474)
Q Consensus 274 ~~V~F~~~~~~~ll~~~-~D~tIkIWDv~tg~~~~~l~~h-------~~~v~sv~F---spdg~llaS~s---------- 332 (474)
.+++|. +.++.+..++ ..++|-.||...+...++.-.+ ...++.+.+ -|+|++++...
T Consensus 16 E~~~wd-~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYD-RTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEE-TTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCc-CCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 345554 3357777877 7999999999866554442221 124688999 48899998532
Q ss_pred ----CCcEEEEeCC----CcEEE--EeccCCCC-------cCCCCeeEEEECCCCCEEEEEecCCCccccccCCC-CeEE
Q 011970 333 ----NRTVAVWNFR----GELVT--SFEDHLLW-------HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSA-GSIN 394 (474)
Q Consensus 333 ----D~tIklWd~~----G~ll~--tl~gH~~~-------~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~D-gtIk 394 (474)
++.|..+|+. |+.+. .|.+.... .+ ...+.+++-++|+.-++++. - +.|-
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~-~~~nDvavD~~GnaYVt~s~-----------~~~~I~ 162 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP-FGVVQSAQDRDGNSYVAFAL-----------GMPAIA 162 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC-EEEEEEEECTTSCEEEEEEE-----------SSCEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccc-cCCceeEECCCCCEEEeCCC-----------CCCeEE
Confidence 5678899987 77654 33322210 00 01589999999999999886 4 5555
Q ss_pred EEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEcCCCcEEEcc
Q 011970 395 VSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 473 (474)
Q Consensus 395 lWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs~DgtVklWd 473 (474)
..+. .|+.+..+--.. |... ..-..+.++|+|||+.|+.....|.+.-.|
T Consensus 163 rV~p-dG~~~~~~~~~~--~~~~--------------------------~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 163 RVSA-DGKTVSTFAWES--GNGG--------------------------QRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp EECT-TSCCEEEEEECC--CCSS--------------------------SCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred EEeC-CCCEEeeeeecC--CCcc--------------------------cccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 5553 466444432111 0000 001456789999999988776677665443
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.93 E-value=2.1 Score=40.32 Aligned_cols=193 Identities=9% Similarity=0.018 Sum_probs=96.1
Q ss_pred CCCeEEEEec-CC-----CcEEEeecCCCeEEE--EEcCC-cEEEEEEcCCceEEEEecCC--CCccEEEEecCCCe---
Q 011970 196 VNGKVLTYSA-QD-----SIYKVFDLKNYTMLY--SISDK-HVQEIKISPGIMLLIFNRSS--SHVPLKILSIEDGT--- 261 (474)
Q Consensus 196 ~nGk~LaS~s-~D-----~tiKlWdl~tg~~l~--tl~~~-~V~~vafSpg~~la~~s~~s--~D~tIkLWdi~tG~--- 261 (474)
.++++++.|+ .+ ..+.++|+.+.+-.. .++.. .-.+++...+.+++.++..+ ....+.++|+.+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 3566777776 32 367788887766221 22211 11122223444444433211 11358899998876
Q ss_pred E--EEEEeecCcce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCceEEec--cccCCceEEEEEcCCCcEEEEE
Q 011970 262 V--LKVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVS--RTEFMTPSAFIFLYENQLFLTF 331 (474)
Q Consensus 262 ~--L~tl~~h~~~v-~~V~F~~~~~~~ll~~~~D-----~tIkIWDv~tg~~~~~l--~~h~~~v~sv~Fspdg~llaS~ 331 (474)
- +..+.. .+. ..+... ++..++.|+.+ ..+.++|+.+.+-.+.. ...-....++ ..++++++.|
T Consensus 93 W~~~~~~p~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~G 166 (301)
T 2vpj_A 93 WYSVAPMNV--RRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLV--VASGVIYCLG 166 (301)
T ss_dssp CEEECCCSS--CCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEE--EETTEEEEEC
T ss_pred eEECCCCCC--CccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEE--EECCEEEEEC
Confidence 3 222221 111 222322 23444445533 46889999988765432 1111111222 3378888887
Q ss_pred c-C-----CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 332 R-N-----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 332 s-D-----~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
+ + ..+.++|.....-..+..-... ...-..+. -++++++.|+.... ..-..|.++|+.+++-.
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~--~~~~i~v~GG~~~~------~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATK--RSGAGVAL--LNDHIYVVGGFDGT------AHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSC--CBSCEEEE--ETTEEEEECCBCSS------SBCCCEEEEETTTTEEE
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCcc--cccceEEE--ECCEEEEEeCCCCC------cccceEEEEeCCCCcEE
Confidence 5 4 4688889854433333221111 11111222 37788887765210 01357889999887654
No 311
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.83 E-value=0.38 Score=50.49 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=48.9
Q ss_pred eEEeccccCCceEEEEEcCCCc--EEEEEcCCcEEEEeCCCcE----EEEeccCCCC----cCCCCeeEEEECCC----C
Q 011970 305 LMEVSRTEFMTPSAFIFLYENQ--LFLTFRNRTVAVWNFRGEL----VTSFEDHLLW----HPDCNTNNIYITSD----Q 370 (474)
Q Consensus 305 ~~~~l~~h~~~v~sv~Fspdg~--llaS~sD~tIklWd~~G~l----l~tl~gH~~~----~~~~~v~svafSpD----g 370 (474)
+++++......+++++|.|||. +|++-..|.|++++.+|.. +..+..-... ........|+|+|| +
T Consensus 5 ~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~ 84 (463)
T 2wg3_C 5 CIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG 84 (463)
T ss_dssp EEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC
T ss_pred EEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC
Confidence 4455555567899999999995 8888889999999876542 2222210000 00012578999996 8
Q ss_pred CEEEEEec
Q 011970 371 DLIISYCK 378 (474)
Q Consensus 371 ~~LaS~s~ 378 (474)
.+.++++.
T Consensus 85 ~lYv~yt~ 92 (463)
T 2wg3_C 85 KLYVSYTT 92 (463)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeC
Confidence 88888875
No 312
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.68 E-value=0.81 Score=47.59 Aligned_cols=74 Identities=18% Similarity=0.123 Sum_probs=47.5
Q ss_pred eEEeccccCCceEEEEEcCCCcEEEEEcC-CcEEEEeCC-CcE--EEEeccCCC-CcCCCCeeEEEECC----CCCEEEE
Q 011970 305 LMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFR-GEL--VTSFEDHLL-WHPDCNTNNIYITS----DQDLIIS 375 (474)
Q Consensus 305 ~~~~l~~h~~~v~sv~Fspdg~llaS~sD-~tIklWd~~-G~l--l~tl~gH~~-~~~~~~v~svafSp----Dg~~LaS 375 (474)
.++++......+++++|.|||+++++-.. +.|.+++.. |+. +..+..-.. .........|+|+| +|.+.++
T Consensus 18 ~~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 18 DKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp CEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 34444444568999999999999999885 578888874 653 334432100 00001246899999 6777777
Q ss_pred Eec
Q 011970 376 YCK 378 (474)
Q Consensus 376 ~s~ 378 (474)
++.
T Consensus 98 ~s~ 100 (454)
T 1cru_A 98 GTF 100 (454)
T ss_dssp EEE
T ss_pred Eec
Confidence 753
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.61 E-value=3.4 Score=42.87 Aligned_cols=103 Identities=8% Similarity=0.151 Sum_probs=63.2
Q ss_pred CcceeEEEEEecCCCeEEEEeCCC-cEEEEECCCCceEE--eccc------cCCceEEEEEcC----CCcEEEEEcC---
Q 011970 270 LHRNKKVDFIEQFNEKLLVKQENE-NLQILDVRNAELME--VSRT------EFMTPSAFIFLY----ENQLFLTFRN--- 333 (474)
Q Consensus 270 ~~~v~~V~F~~~~~~~ll~~~~D~-tIkIWDv~tg~~~~--~l~~------h~~~v~sv~Fsp----dg~llaS~sD--- 333 (474)
...-+.++|.+ ++.|+++...+ .|++++..+|+... .+.. ....+..++|+| ++.+.++-+.
T Consensus 26 l~~P~~~a~~p--dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 26 LNKPHALLWGP--DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CSSEEEEEECT--TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCceEEEEcC--CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 45568999874 45677776664 79999876666432 2221 234567899999 6888887641
Q ss_pred ----------CcEEEEeCC-C--c------EEEEeccCCCCcCCCCeeEEEECCCCCEEEEEec
Q 011970 334 ----------RTVAVWNFR-G--E------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 334 ----------~tIklWd~~-G--~------ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
..|.-++.+ + + ++..+.. ...| ....|+|.|||.+.++-+.
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-~~~H---~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-SKDH---QSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-CSSC---CEEEEEECTTSCEEEEECC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-CCCC---CCCeEeECCCCeEEEEECC
Confidence 234444442 2 1 1222332 1122 1478999999999998653
No 314
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.59 E-value=4 Score=40.46 Aligned_cols=233 Identities=9% Similarity=0.089 Sum_probs=118.6
Q ss_pred EEEEee--ccEEEEeeCCCeEEeeeccccceeeEee------cCCCceEEEEEEeeC----CCEEEEEEeecCCCcccee
Q 011970 92 IEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLN------VSPDEVIRSLFYNKN----NDSLITVSVYASDNFSSLK 159 (474)
Q Consensus 92 ~~i~~s--~~~las~s~dgtiklW~~~tg~~l~~l~------g~~~~~i~sv~fspd----g~~Lis~S~~~s~d~s~Lk 159 (474)
+.|+|. |..|+.+...|.|++++.. |+....+. .........|+|+|| |...++-+..+.++-..
T Consensus 21 ~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~-- 97 (353)
T 2g8s_A 21 WALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG-- 97 (353)
T ss_dssp EEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE--
T ss_pred EEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce--
Confidence 456666 6525555678999998853 54321111 112235689999995 54444422211111000
Q ss_pred eeEEEEeEeccC--CCCCccceeee-----ccccCceEEEEeCCCCeEEEEecCC-------------CcEEEeecCCCe
Q 011970 160 CRSTKIEYIRRG--KPDSGFALFES-----ESLKWPGFVEFDDVNGKVLTYSAQD-------------SIYKVFDLKNYT 219 (474)
Q Consensus 160 ~~~~~iw~i~~G--~~~~~~~lf~~-----~~~~~~~~V~Fs~~nGk~LaS~s~D-------------~tiKlWdl~tg~ 219 (474)
..+.-+++..+ ++.....++.. ....++..++|+ |||.+.++-+.. +.|.-.|.. |+
T Consensus 98 -~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~-pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d-G~ 174 (353)
T 2g8s_A 98 -TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFD-GKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ-GE 174 (353)
T ss_dssp -EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEEC-SSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT-SC
T ss_pred -eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEEC-CCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC-CC
Confidence 12222222211 22111112221 111235579998 799877765431 234444543 32
Q ss_pred ---------------EEEEEcCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe----------------------
Q 011970 220 ---------------MLYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT---------------------- 261 (474)
Q Consensus 220 ---------------~l~tl~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~---------------------- 261 (474)
.++..--.+.+.++|.| ++.|.++... .+..=+|.-++.|.
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g-~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHG-PRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEEC-SBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecC-CCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 23333335689999998 7777666432 12111222222221
Q ss_pred ---------EEEEEeecCcceeEEEEEec-----CCCeEEEEe-CCCcEEEEECCCCceEE---eccccCCceEEEEEcC
Q 011970 262 ---------VLKVFYHLLHRNKKVDFIEQ-----FNEKLLVKQ-ENENLQILDVRNAELME---VSRTEFMTPSAFIFLY 323 (474)
Q Consensus 262 ---------~L~tl~~h~~~v~~V~F~~~-----~~~~ll~~~-~D~tIkIWDv~tg~~~~---~l~~h~~~v~sv~Fsp 323 (474)
.+..+..| .....++|..- ..+.++++. ..+.|...++..++... .+.+....+..+++.|
T Consensus 254 ~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp BSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC
Confidence 11222222 23456777531 235677664 67788888877665432 2334456899999999
Q ss_pred CCcEEEEEc
Q 011970 324 ENQLFLTFR 332 (474)
Q Consensus 324 dg~llaS~s 332 (474)
||.++++..
T Consensus 333 dG~lyv~td 341 (353)
T 2g8s_A 333 DGYLYVLTD 341 (353)
T ss_dssp TSCEEEEEC
T ss_pred CCcEEEEEe
Confidence 999988643
No 315
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.52 E-value=9.5 Score=44.47 Aligned_cols=213 Identities=12% Similarity=0.114 Sum_probs=121.8
Q ss_pred CCcEEEeecCCCe--EEEEEc-CCcEEEEEEcC-CceEEEEecCC-----------------------------------
Q 011970 207 DSIYKVFDLKNYT--MLYSIS-DKHVQEIKISP-GIMLLIFNRSS----------------------------------- 247 (474)
Q Consensus 207 D~tiKlWdl~tg~--~l~tl~-~~~V~~vafSp-g~~la~~s~~s----------------------------------- 247 (474)
++++||.-+.+-+ .+.+++ +..+..|+++| .+++++.....
T Consensus 714 ~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1158)
T 3ei3_A 714 NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSST 793 (1158)
T ss_dssp SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----
T ss_pred CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccc
Confidence 5669998876433 344555 67888899997 44433322110
Q ss_pred -----------CCccEEEEecCCCeEEEEEeec-CcceeEEEEEec---CCCeEEEEe------C----CCcEEEEECCC
Q 011970 248 -----------SHVPLKILSIEDGTVLKVFYHL-LHRNKKVDFIEQ---FNEKLLVKQ------E----NENLQILDVRN 302 (474)
Q Consensus 248 -----------~D~tIkLWdi~tG~~L~tl~~h-~~~v~~V~F~~~---~~~~ll~~~------~----D~tIkIWDv~t 302 (474)
.-..|+|.|-.+.+.+.+++-. ...+.++..... ..+.+++|- + .|-|.++++..
T Consensus 794 ~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~ 873 (1158)
T 3ei3_A 794 APHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSD 873 (1158)
T ss_dssp ------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEET
T ss_pred cCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEEC
Confidence 0124899999999988887622 234455554321 135777763 1 26799999986
Q ss_pred CceEEecc-ccCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-CcEEEEecc-CCCCcCCCCeeEEEECCCCCEEEEEecC
Q 011970 303 AELMEVSR-TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKA 379 (474)
Q Consensus 303 g~~~~~l~-~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~ll~tl~g-H~~~~~~~~v~svafSpDg~~LaS~s~~ 379 (474)
+++..+.. ...+.|++++= -+|+++ .+-.++|+||++. .+.++ .+. +-.. |..+.+...|++|+-|..
T Consensus 874 ~kL~lv~~~~v~g~v~al~~-~~g~Ll-a~ig~~l~vy~l~~~~~L~-~~~~~~~~-----i~~~~l~~~~~~I~vgD~- 944 (1158)
T 3ei3_A 874 GKLQTVAEKEVKGAVYSMVE-FNGKLL-ASINSTVRLYEWTTEKELR-TECNHYNN-----IMALYLKTKGDFILVGDL- 944 (1158)
T ss_dssp TEEEEEEEEEESSCEEEEEE-ETTEEE-EEETTEEEEEEECTTSCEE-EEEEECCC-----SCEEEEEEETTEEEEEES-
T ss_pred CEEEEEEEEEcCCcCEEEee-eCCEEE-EEcCCEEEEEECCCCceEE-EEeecccc-----EEEEEEeccCCEEEEEEh-
Confidence 65543322 23467888752 246555 4456899999995 44444 221 1111 223344446778887653
Q ss_pred CCccccccCCCCeEEE--EeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCC
Q 011970 380 EPEDQWMEGSAGSINV--SSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEER 457 (474)
Q Consensus 380 ~~~~~~~~s~DgtIkl--Wdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg 457 (474)
-..|-+ |+-..++. ..+-.+.. | .+|+++.|=-++
T Consensus 945 ----------~~Sv~~~~y~~~~~~L-~~~a~D~~-~-------------------------------~~vta~~~ld~~ 981 (1158)
T 3ei3_A 945 ----------MRSVLLLAYKPMEGNF-EEIARDFN-P-------------------------------NWMSAVEILDDD 981 (1158)
T ss_dssp ----------SBCEEEEEEETTTTEE-EEEEECCS-C-------------------------------BCEEEEEEEETT
T ss_pred ----------hheEEEEEEEcCCCeE-EEEEeecc-c-------------------------------ccEEEEEEEccC
Confidence 344444 34333333 23322221 1 288899886554
Q ss_pred CEEEEEcCCCcEEEc
Q 011970 458 NEIYTGNRHGLVHVW 472 (474)
Q Consensus 458 ~~LaSgs~DgtVklW 472 (474)
.++.+..+|.+.+.
T Consensus 982 -t~l~aD~~gNl~vl 995 (1158)
T 3ei3_A 982 -NFLGAENAFNLFVC 995 (1158)
T ss_dssp -EEEEEETTSEEEEE
T ss_pred -cEEEEcCCCcEEEE
Confidence 66678888887764
No 316
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.47 E-value=3.3 Score=43.50 Aligned_cols=152 Identities=14% Similarity=0.186 Sum_probs=92.0
Q ss_pred cCCCeEEEEeCCCcEEEEECCCCceEEeccc----cCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-Cc-----------
Q 011970 281 QFNEKLLVKQENENLQILDVRNAELMEVSRT----EFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GE----------- 344 (474)
Q Consensus 281 ~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~----h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~----------- 344 (474)
..|..+... .++.||.=++..+.--+++.- .+..+..+..||+|++||-.++.+|.|=.+- +.
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 434444444 347888878774433333332 2446788999999999999999999998873 42
Q ss_pred -EEEEeccCCCCc-CCCCeeEEEECCCC---CEEEEEecCCCccccccCCCCeEEEEeCCCCe--EEEEecCCCCCCCCc
Q 011970 345 -LVTSFEDHLLWH-PDCNTNNIYITSDQ---DLIISYCKAEPEDQWMEGSAGSINVSSILTGK--CLAKINATNCSPKVD 417 (474)
Q Consensus 345 -ll~tl~gH~~~~-~~~~v~svafSpDg---~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~--cl~tl~gH~~~~~~~ 417 (474)
..+++.=....+ +...|..+-|+|-| ..|+.=.. |++||+||+.... .. +|+-... .
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLts-----------D~~Ir~yDl~~s~~~P~-~L~k~~~---~- 172 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKE-----------DDTITMFDILNSQEKPI-VLNKPNN---S- 172 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEET-----------TSCEEEEETTCTTSCCE-EESCCCS---E-
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEec-----------CCEEEEEEcccCCCCCc-chhcccc---c-
Confidence 122332110000 11237889999954 35555443 9999999997522 22 4432110 0
Q ss_pred cccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEEEc--CCCcEE
Q 011970 418 DELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN--RHGLVH 470 (474)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaSgs--~DgtVk 470 (474)
-.+.+ -...|.+++|+++|=+||-.+ +.|-|.
T Consensus 173 -----------------fg~d~----~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 173 -----------------FGLDA----RVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp -----------------EESCS----SCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred -----------------cCCCc----ccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 00000 013899999999999999855 878764
No 317
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.21 E-value=11 Score=43.95 Aligned_cols=226 Identities=10% Similarity=0.030 Sum_probs=127.0
Q ss_pred CCCeEEeeeccccc--eeeEeecCCCceEEEEEEeeCCCEEEEEEeec----CCC-c-----------------------
Q 011970 106 HSGVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYA----SDN-F----------------------- 155 (474)
Q Consensus 106 ~dgtiklW~~~tg~--~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~----s~d-~----------------------- 155 (474)
.++++++..+++-+ .++++.- .+.++.++|+|+.++++.+.... .++ .
T Consensus 713 ~~~~LrI~~i~~~~~~~~~~ipL--~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1158)
T 3ei3_A 713 NNSTLTIGTIDEIQKLHIRTVPL--YESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFS 790 (1158)
T ss_dssp CSSCEEEEEECCSSSEEEEEEEC--SSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC-
T ss_pred cCCceEEEEecccCCeeEEEEeC--CCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccccccc
Confidence 35568887765322 3344443 46789999999998765543211 000 0
Q ss_pred ----------c-ceeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec----------CCCcEEEee
Q 011970 156 ----------S-SLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QDSIYKVFD 214 (474)
Q Consensus 156 ----------s-~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s----------~D~tiKlWd 214 (474)
- ...-..++|-|-.+.+....+.|-+.|....+..|.|......+|+-|. ..|-|.+++
T Consensus 791 ~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~ 870 (1158)
T 3ei3_A 791 SSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQ 870 (1158)
T ss_dssp ---------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEE
T ss_pred ccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEE
Confidence 0 0112345555545555433222222232333345677533346777665 246788998
Q ss_pred cCCCeEEEEEc----CCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEe-ecCcceeEEEEEecCCCeEEEE
Q 011970 215 LKNYTMLYSIS----DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVK 289 (474)
Q Consensus 215 l~tg~~l~tl~----~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~-~h~~~v~~V~F~~~~~~~ll~~ 289 (474)
+.++++ .-++ .+.|.+++==.| +|+++. -++|+||++...+.|+ .+ .+-..+..+... ..++++++|
T Consensus 871 v~~~kL-~lv~~~~v~g~v~al~~~~g-~Lla~i----g~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~-~~~~~I~vg 942 (1158)
T 3ei3_A 871 YSDGKL-QTVAEKEVKGAVYSMVEFNG-KLLASI----NSTVRLYEWTTEKELR-TECNHYNNIMALYLK-TKGDFILVG 942 (1158)
T ss_dssp EETTEE-EEEEEEEESSCEEEEEEETT-EEEEEE----TTEEEEEEECTTSCEE-EEEEECCCSCEEEEE-EETTEEEEE
T ss_pred EECCEE-EEEEEEEcCCcCEEEeeeCC-EEEEEc----CCEEEEEECCCCceEE-EEeeccccEEEEEEe-ccCCEEEEE
Confidence 875543 3332 456777663334 666553 2689999998766555 22 111122222221 237888888
Q ss_pred eCCCcEEE--EECCCCceEEeccc-cCCceEEEEEcCCCcEEEEEcCCcEEEEeC
Q 011970 290 QENENLQI--LDVRNAELMEVSRT-EFMTPSAFIFLYENQLFLTFRNRTVAVWNF 341 (474)
Q Consensus 290 ~~D~tIkI--WDv~tg~~~~~l~~-h~~~v~sv~Fspdg~llaS~sD~tIklWd~ 341 (474)
-.-+.|.+ |+...+++...-+. +..+++++.|..++..+++-.++.|.+...
T Consensus 943 D~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 943 DLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQK 997 (1158)
T ss_dssp ESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEE
T ss_pred EhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEec
Confidence 65555554 56666666665433 567899999998876555444888888764
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.88 E-value=1.3 Score=42.63 Aligned_cols=107 Identities=10% Similarity=0.062 Sum_probs=66.2
Q ss_pred CCceEEEEEcCCCcEEEEEcCCcEEEEeCCC-c--E-----EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccc
Q 011970 313 FMTPSAFIFLYENQLFLTFRNRTVAVWNFRG-E--L-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQ 384 (474)
Q Consensus 313 ~~~v~sv~Fspdg~llaS~sD~tIklWd~~G-~--l-----l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~ 384 (474)
...+..++|+|+|.|.+. +++ +||-.+. . . ..+--|...|.- -..++|-|+|.+.++ +
T Consensus 40 w~~~~~laf~P~G~LYaV-~~G--~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~---F~a~~fD~~G~LYav-~------- 105 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGV-LND--KIYKGTPPTHDNDNWMGRAKKIGNGGWNQ---FQFLFFDPNGYLYAV-S------- 105 (236)
T ss_dssp CTTCSEEEECTTSCEEEE-ETT--EEEEESCCCSTTCCHHHHCEEEECSCGGG---CSEEEECTTSCEEEE-E-------
T ss_pred cccceeEEECCCccEEEE-eCC--eEEEECCCCCCcccccccccEeccccccc---ceEEEECCCCCEEEe-C-------
Confidence 456779999999999988 766 4666531 1 0 122333344431 368999999999998 3
Q ss_pred cccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccc-c-ccccCEEEEEEcCCCCEEEE
Q 011970 385 WMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTV-G-EALEDITSLFYDEERNEIYT 462 (474)
Q Consensus 385 ~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~~V~slafSpDg~~LaS 462 (474)
||.|.-|+-.+. ++. .|...++. . ...+.+..|+|+|||.+-|-
T Consensus 106 -----dG~iyr~~pP~~-------~~~----------------------~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav 151 (236)
T 1tl2_A 106 -----KDKLYKASPPQS-------DTD----------------------NWIARATEVGSGGWSGFKFLFFHPNGYLYAV 151 (236)
T ss_dssp -----TTEEEEESCCCS-------TTC----------------------CHHHHSEEEECSSGGGEEEEEECTTSCEEEE
T ss_pred -----CCEEEEeCCCcC-------CCC----------------------ceeccccEeccCCCCceEEEEECCCceEEEE
Confidence 788866664321 111 12221111 1 23348899999999986555
Q ss_pred EcCCCcE
Q 011970 463 GNRHGLV 469 (474)
Q Consensus 463 gs~DgtV 469 (474)
. |+.+
T Consensus 152 ~--dg~l 156 (236)
T 1tl2_A 152 H--GQQF 156 (236)
T ss_dssp E--TTEE
T ss_pred e--CCcE
Confidence 5 7765
No 319
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.76 E-value=2.8 Score=41.09 Aligned_cols=110 Identities=9% Similarity=0.034 Sum_probs=63.5
Q ss_pred CccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEe----CCCcEEEEECCCCceEEeccccCCceEEEEEcCC
Q 011970 249 HVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ----ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE 324 (474)
Q Consensus 249 D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~----~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspd 324 (474)
...|+..++..++ ...+... . ...|+ +++++|.-.. .+..|..-++...+..++ ..+.. .+|+|+
T Consensus 87 ~~~Iy~i~~dg~~-~~~l~~~--~--~~~~s-~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~l-t~~~~----~~~~~~ 155 (302)
T 3s25_A 87 RNSLCRIKRNGHG-STVLDPD--P--CIYAS-LIGNYIYYLHYDTQTATSLYRIRIDGEEKKKI-KNHYL----FTCNTS 155 (302)
T ss_dssp SEEEEEEETTSCC-CEEEECS--C--EEEEE-EETTEEEEEEESSSSCEEEEEEETTSCCCEEE-ESSCC----CCSEEE
T ss_pred CCeEEEEeCCCCc-ceEeecC--C--ccEEE-EeCCEEEEEeecCCCCceEEEEECCCCCeEEE-eCCCc----eEeeEE
Confidence 3568888887664 3333321 1 12444 4678888764 345555567665554433 33322 356888
Q ss_pred CcEEEEEc--CCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEe
Q 011970 325 NQLFLTFR--NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 377 (474)
Q Consensus 325 g~llaS~s--D~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s 377 (474)
|+.|.=.+ ..+|.+-+++|.-.+.+.... ....+.|+|++|+-..
T Consensus 156 g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~--------~~~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 156 DRYFYYNNPKNGQLYRYDTASQSEALFYDCN--------CYKPVVLDDTNVYYMD 202 (302)
T ss_dssp TTEEEEECTTTCCEEEEETTTTEEEEEECSC--------EEEEEEEETTEEEEEE
T ss_pred CCEEEEEeCCCceEEEEECCCCCEEEEeCCC--------ccceeeecCCEEEEEE
Confidence 88777444 568888888765544443221 1245679999998644
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.57 E-value=4.9 Score=37.75 Aligned_cols=195 Identities=10% Similarity=0.059 Sum_probs=98.3
Q ss_pred CCeEEEEecCC-----CcEEEeecCCCe---E--EEEEcCC-cEEEEEEcCCceEEEEecCCC--CccEEEEecCCCeEE
Q 011970 197 NGKVLTYSAQD-----SIYKVFDLKNYT---M--LYSISDK-HVQEIKISPGIMLLIFNRSSS--HVPLKILSIEDGTVL 263 (474)
Q Consensus 197 nGk~LaS~s~D-----~tiKlWdl~tg~---~--l~tl~~~-~V~~vafSpg~~la~~s~~s~--D~tIkLWdi~tG~~L 263 (474)
++++++.|+.+ ..+-++|+.+.+ - +..++.. .-.+++...+.+++.++..+. ...+.++|+.+++-.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 68888888865 468888988765 2 2222211 111222223444444322211 235888999887654
Q ss_pred EEEeecCcce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-C---
Q 011970 264 KVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N--- 333 (474)
Q Consensus 264 ~tl~~h~~~v-~~V~F~~~~~~~ll~~~~D-----~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D--- 333 (474)
..-.-...+. ..+... ++..++.|+.+ ..+.++|+.+.+-.+...-........+...++++++.|. +
T Consensus 142 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 142 MLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA 219 (301)
T ss_dssp EEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred ECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc
Confidence 3221111111 222222 34444446543 5688999999876654211111111112234788888876 4
Q ss_pred --CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 334 --RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 334 --~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
..|.++|.....-..+..-.. +.+....+. -++++++.|+..+. ..-..|-++|+.+++-
T Consensus 220 ~~~~v~~yd~~~~~W~~~~~~p~--~r~~~~~~~--~~~~i~v~GG~~~~------~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 220 HLSSVEAYNIRTDSWTTVTSMTT--PRCYVGATV--LRGRLYAIAGYDGN------SLLSSIECYDPIIDSW 281 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSS--CCBSCEEEE--ETTEEEEECCBCSS------SBEEEEEEEETTTTEE
T ss_pred ccceEEEEeCCCCcEEECCCCCC--cccceeEEE--ECCEEEEEcCcCCC------cccccEEEEcCCCCeE
Confidence 468899986433333332111 111112232 37888887764100 0014678889877654
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.57 E-value=13 Score=37.84 Aligned_cols=198 Identities=16% Similarity=0.182 Sum_probs=109.6
Q ss_pred CCCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEecCCCCccEEEEecCC-CeEEEEEeecC--
Q 011970 195 DVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLL-- 270 (474)
Q Consensus 195 ~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~t-G~~L~tl~~h~-- 270 (474)
.|..++||==+ ..++.|+|+++-+.+++.. .+.|-=-+|-...+|+.-. +..|.-|+++. -++.+.|.-|.
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT----~taVyHWs~~~~s~P~kvFdR~~~L 149 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT----DNAVYHWSMEGESQPVKMFDRHSSL 149 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEE----SSEEEEEESSTTCCCEEEEECCGGG
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEc----CCcEEEEcccCCCCCceeeecchhc
Confidence 47888888766 6899999999999888765 4555555555556666654 35699999974 46778887542
Q ss_pred cceeEEEEEecCCCe-EEE-E--e----CCCcEEEEECCCCceEEeccccCCceEEEEE--cCC-CcEEEEEcC----Cc
Q 011970 271 HRNKKVDFIEQFNEK-LLV-K--Q----ENENLQILDVRNAELMEVSRTEFMTPSAFIF--LYE-NQLFLTFRN----RT 335 (474)
Q Consensus 271 ~~v~~V~F~~~~~~~-ll~-~--~----~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~F--spd-g~llaS~sD----~t 335 (474)
....=+.+....+++ ++. | + -.|.++|+.++.+. -+.+.||...--.+.+ .+. .++|+-+.. +.
T Consensus 150 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 228 (365)
T 2xzh_A 150 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 228 (365)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEE
T ss_pred ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 222333443222333 332 3 2 24788999987654 4566788533222211 122 234433321 35
Q ss_pred EEEEeCC----CcE------EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEE
Q 011970 336 VAVWNFR----GEL------VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLA 405 (474)
Q Consensus 336 IklWd~~----G~l------l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~ 405 (474)
+.|=++. |.. +.-+-.. ....|-.| ++.+|+--.+|.--.+ -|.|-|.|++||.|+.
T Consensus 229 LhIiEi~~~~~~~~~f~kk~vdi~fpp-ea~~DFPV-amqvs~kygviyviTK-----------~G~ihlyDleTgt~i~ 295 (365)
T 2xzh_A 229 LHIIEVGTPPTGNQPFPKKAVDVFFPP-EAQNDFPV-AMQISEKHDVVFLITK-----------YGYIHLYDLETGTCIY 295 (365)
T ss_dssp EEEEECSSCCTTCCCCCCEEEEECCCT-TCTTCCEE-EEEEETTTTEEEEEET-----------TSEEEEEETTTCCEEE
T ss_pred EEEEEcCCCCCCCCCcccccceeeCCc-cccCCceE-EEEecccCCEEEEEeC-----------CcEEEEEEcccCcEEE
Confidence 5555551 110 0000000 00011111 3334444444444444 7999999999999997
Q ss_pred EecCCC
Q 011970 406 KINATN 411 (474)
Q Consensus 406 tl~gH~ 411 (474)
.-+=.+
T Consensus 296 ~nrIS~ 301 (365)
T 2xzh_A 296 MNRISG 301 (365)
T ss_dssp EEECCS
T ss_pred EeccCC
Confidence 654433
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.30 E-value=9.7 Score=35.76 Aligned_cols=192 Identities=12% Similarity=0.078 Sum_probs=99.2
Q ss_pred CCeEEEEecCC-----CcEEEeecCCCeEE--EEEcCC-cEEEEEEcCCceEEEEecCCCC--ccEEEEecCCCeEEEEE
Q 011970 197 NGKVLTYSAQD-----SIYKVFDLKNYTML--YSISDK-HVQEIKISPGIMLLIFNRSSSH--VPLKILSIEDGTVLKVF 266 (474)
Q Consensus 197 nGk~LaS~s~D-----~tiKlWdl~tg~~l--~tl~~~-~V~~vafSpg~~la~~s~~s~D--~tIkLWdi~tG~~L~tl 266 (474)
++++++.|+.+ ..+-++|+.+.+-. ..++.. .-.+++.-.+.+++.++..... ..+.++|+++.+-...-
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 68888888855 35778888877622 222211 1112222245555555432211 35788899887654321
Q ss_pred eecCcce-eEEEEEecCCCeEEE-EeC-------CCcEEEEECCCCceEEec--cccCCceEEEEEcCCCcEEEEEc-C-
Q 011970 267 YHLLHRN-KKVDFIEQFNEKLLV-KQE-------NENLQILDVRNAELMEVS--RTEFMTPSAFIFLYENQLFLTFR-N- 333 (474)
Q Consensus 267 ~~h~~~v-~~V~F~~~~~~~ll~-~~~-------D~tIkIWDv~tg~~~~~l--~~h~~~v~sv~Fspdg~llaS~s-D- 333 (474)
.-...+. ..+... +++|.+ |+. -..+.++|+.+.+-.+.. ...-....++ ..++++++.|+ +
T Consensus 141 ~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~ 215 (302)
T 2xn4_A 141 PMNTRRSSVGVGVV---GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG--VLNNLLYAVGGHDG 215 (302)
T ss_dssp CCSSCCBSCEEEEE---TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBSS
T ss_pred CCCCcccCceEEEE---CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEE--EECCEEEEECCCCC
Confidence 1111111 222322 344444 543 245889999998766542 1111111222 34788888876 4
Q ss_pred ----CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 334 ----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 334 ----~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
..+.++|.+...-..+....... . ..-+..-++++++.|+..+. ..-..|.++|+.+.+-
T Consensus 216 ~~~~~~~~~yd~~~~~W~~~~~~~~~r--~--~~~~~~~~~~i~v~GG~~~~------~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 216 PLVRKSVEVYDPTTNAWRQVADMNMCR--R--NAGVCAVNGLLYVVGGDDGS------CNLASVEYYNPTTDKW 279 (302)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCSSCC--B--SCEEEEETTEEEEECCBCSS------SBCCCEEEEETTTTEE
T ss_pred CcccceEEEEeCCCCCEeeCCCCCCcc--c--cCeEEEECCEEEEECCcCCC------cccccEEEEcCCCCeE
Confidence 36888998644444443222111 1 11122237888887764110 0124688999887754
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=91.19 E-value=5.1 Score=42.04 Aligned_cols=130 Identities=18% Similarity=0.278 Sum_probs=81.5
Q ss_pred EeCCCCeEEEEecCCCcEEEeecCC---CeEEEE---EcCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCe----
Q 011970 193 FDDVNGKVLTYSAQDSIYKVFDLKN---YTMLYS---ISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT---- 261 (474)
Q Consensus 193 Fs~~nGk~LaS~s~D~tiKlWdl~t---g~~l~t---l~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~---- 261 (474)
|...||.-|..+ +++.||.=++.. |+.+.. +.-..|..+.+|| |..||+.+ +.+|.|-.+..+.
T Consensus 27 ~~~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g----~~~V~Vv~LP~~~~~~~ 101 (452)
T 3pbp_A 27 FSSQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN----DNEIFVMEVPWGYSNVE 101 (452)
T ss_dssp EEETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC----SSEEEEEECCTTCSCCC
T ss_pred EEEcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec----CCeEEEEEecCccccCc
Confidence 333577766654 578999888763 333332 1123678899998 55555542 5688888777442
Q ss_pred --------EEEEEee------cCcceeEEEEEec--CCCeEEEEeCCCcEEEEECCCCc--eEEeccc---------cCC
Q 011970 262 --------VLKVFYH------LLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNAE--LMEVSRT---------EFM 314 (474)
Q Consensus 262 --------~L~tl~~------h~~~v~~V~F~~~--~~~~ll~~~~D~tIkIWDv~tg~--~~~~l~~---------h~~ 314 (474)
..+++.- ....|.+|-|+|- .+..|++=-.|++||+||+.... .. ++.. ..+
T Consensus 102 ~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ 180 (452)
T 3pbp_A 102 DVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVN 180 (452)
T ss_dssp CHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCC
T ss_pred ccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccc
Confidence 1234441 1356899999853 24577777899999999998632 22 3321 226
Q ss_pred ceEEEEEcCCCcEE
Q 011970 315 TPSAFIFLYENQLF 328 (474)
Q Consensus 315 ~v~sv~Fspdg~ll 328 (474)
.|.+++|.++|=.|
T Consensus 181 ev~S~~Fg~~~lTL 194 (452)
T 3pbp_A 181 DITDLEFSKDGLTL 194 (452)
T ss_dssp CEEEEEECTTSSCE
T ss_pred eEEEEEEcCCCcEE
Confidence 67788888766433
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.08 E-value=10 Score=35.61 Aligned_cols=196 Identities=11% Similarity=0.015 Sum_probs=94.0
Q ss_pred CCeEEEEecCC----CcEEEeecCCCeEEE--EEcCCc-EEEEEEcCCceEEEEecCCC--CccEEEEecCCCeEEEEEe
Q 011970 197 NGKVLTYSAQD----SIYKVFDLKNYTMLY--SISDKH-VQEIKISPGIMLLIFNRSSS--HVPLKILSIEDGTVLKVFY 267 (474)
Q Consensus 197 nGk~LaS~s~D----~tiKlWdl~tg~~l~--tl~~~~-V~~vafSpg~~la~~s~~s~--D~tIkLWdi~tG~~L~tl~ 267 (474)
++++++.|+.+ ..+..+|+.+.+-.. .++... -.+++...+.+++.++.... -..+.++|+.+.+-...-.
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 35666666643 357778887765221 122111 11222224444444322111 1358889998876433211
Q ss_pred ecCcce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-C-------
Q 011970 268 HLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N------- 333 (474)
Q Consensus 268 ~h~~~v-~~V~F~~~~~~~ll~~~~D-----~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D------- 333 (474)
-...+. ..+... ++..++.|+.+ ..+.++|+.+.+-.+...-....-...+...++++++-|+ +
T Consensus 95 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 95 MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEEC
T ss_pred CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccc
Confidence 111111 222222 34444556644 3577899998876654211111111111224788888775 3
Q ss_pred CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 334 RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 334 ~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
..+.++|...+.-..+..-... ......+. -++++++.|+..+. ..-..+.++|+.+++-.
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~--~~~~iyv~GG~~~~------~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTR--RSGAGVGV--LNNLLYAVGGHDGP------LVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSC--CBSCEEEE--ETTEEEEECCBSSS------SBCCCEEEEETTTTEEE
T ss_pred cEEEEEeCCCCcEEECCCCccc--cccccEEE--ECCEEEEECCCCCC------cccceEEEEeCCCCCEe
Confidence 2478888853333333211111 11111222 37888888764110 01246889998877543
No 325
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.05 E-value=12 Score=36.46 Aligned_cols=193 Identities=8% Similarity=0.040 Sum_probs=102.9
Q ss_pred EEEEeeCCCEEEEEEeecCCC--ccc--eeeeEEEEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEec--CC
Q 011970 134 SLFYNKNNDSLITVSVYASDN--FSS--LKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA--QD 207 (474)
Q Consensus 134 sv~fspdg~~Lis~S~~~s~d--~s~--Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s--~D 207 (474)
+-.++|+|+.|.-++.....+ .+- ..-..++..++..++. .+.... . ..+|+ ++|+.|+... .+
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~----~~l~~~-~----~~~~s-~~g~~Iy~~~~~~~ 126 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS----TVLDPD-P----CIYAS-LIGNYIYYLHYDTQ 126 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC----EEEECS-C----EEEEE-EETTEEEEEEESSS
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc----eEeecC-C----ccEEE-EeCCEEEEEeecCC
Confidence 457799999998875322100 000 0013444444443332 122221 1 23677 6888888776 34
Q ss_pred CcEEEeecC-CCeEEEEEcCCcEEEEEEcC-CceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCe
Q 011970 208 SIYKVFDLK-NYTMLYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEK 285 (474)
Q Consensus 208 ~tiKlWdl~-tg~~l~tl~~~~V~~vafSp-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ 285 (474)
+.-+|+-+. +|+-...|..+.+ .+|+| |+.|.-.+ . +...|..-++.++.....+++ ... ..+. |+++.
T Consensus 127 ~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~-~-g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~-P~g~~ 197 (302)
T 3s25_A 127 TATSLYRIRIDGEEKKKIKNHYL--FTCNTSDRYFYYNN-P-KNGQLYRYDTASQSEALFYDC---NCY-KPVV-LDDTN 197 (302)
T ss_dssp SCEEEEEEETTSCCCEEEESSCC--CCSEEETTEEEEEC-T-TTCCEEEEETTTTEEEEEECS---CEE-EEEE-EETTE
T ss_pred CCceEEEEECCCCCeEEEeCCCc--eEeeEECCEEEEEe-C-CCceEEEEECCCCCEEEEeCC---Ccc-ceee-ecCCE
Confidence 444555443 3444455554444 56676 66655442 2 356788889877665444442 222 2344 67888
Q ss_pred EEEEeCC--CcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc---CCcEEEEeCCCcEEEEec
Q 011970 286 LLVKQEN--ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR---NRTVAVWNFRGELVTSFE 350 (474)
Q Consensus 286 ll~~~~D--~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s---D~tIklWd~~G~ll~tl~ 350 (474)
|.-...+ ..|..=++..++. +++.... + -.|+|+|+.|.-++ ...|..=+++|.-.+.+.
T Consensus 198 iy~t~~~~~~~I~~~~ldG~~~-~~Lt~~~--~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~ 262 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNINNPNP-VVLTEAN--I--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELA 262 (302)
T ss_dssp EEEEEGGGTTEEEEECSSSCCC-EECSCSC--E--EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCe-EEEeCCC--c--ceEEECCCEEEEEECCCCcEEEEEECCCCccEEee
Confidence 8876533 3565557766664 3333322 2 23788888876543 346666666776544443
No 326
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.72 E-value=0.97 Score=51.53 Aligned_cols=37 Identities=14% Similarity=0.277 Sum_probs=33.2
Q ss_pred eeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEec
Q 011970 361 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 408 (474)
Q Consensus 361 v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~ 408 (474)
+.+++.++|..+|++-|. |+++||||+.+|+|+++..
T Consensus 238 ~~~~~~~~~~~~lftl~~-----------D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSL-----------DYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEETTTTEEEEEET-----------TCEEEEEETTTTEEEEEEE
T ss_pred EEEEeecCCCcEEEEEEC-----------CCEEEEEECCCCCeEeeec
Confidence 567888899999999987 9999999999999999864
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=90.21 E-value=21 Score=37.77 Aligned_cols=198 Identities=14% Similarity=0.137 Sum_probs=109.6
Q ss_pred CCCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEecCCCCccEEEEecCC-CeEEEEEeecC--
Q 011970 195 DVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLL-- 270 (474)
Q Consensus 195 ~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~t-G~~L~tl~~h~-- 270 (474)
.|..++||==+ ..++.|+|+++-+.+++.. .+.|-=-+|-...+|+.-. +..|.-|+++. -.+.+.|.-|.
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT----~taVyHWsi~~~s~P~kvFdR~~~L 148 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT----DNAVYHWSMEGESQPVKMFDRHSSL 148 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEEC----SSEEEEEESSSSCCCEEEEECCGGG
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEc----CCeeEEecccCCCCchhheecchhc
Confidence 37788888665 6899999999999888765 3334333333345555553 35699999964 36778887542
Q ss_pred cceeEEEEEe-cCCCeEEE-E--e----CCCcEEEEECCCCceEEeccccCCceEEEEEc--CC-CcEEEEEcC----Cc
Q 011970 271 HRNKKVDFIE-QFNEKLLV-K--Q----ENENLQILDVRNAELMEVSRTEFMTPSAFIFL--YE-NQLFLTFRN----RT 335 (474)
Q Consensus 271 ~~v~~V~F~~-~~~~~ll~-~--~----~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fs--pd-g~llaS~sD----~t 335 (474)
....=+.+.. ++..-++. | + -.|.++|+.++.+. -+.+.||...--.+.+. +. .++|.-+.. +.
T Consensus 149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 227 (494)
T 1bpo_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (494)
T ss_dssp TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCE
T ss_pred ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 1222333322 33333332 2 2 34788999987654 35567786433222221 11 233333322 45
Q ss_pred EEEEeCC----CcE-----EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEE
Q 011970 336 VAVWNFR----GEL-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK 406 (474)
Q Consensus 336 IklWd~~----G~l-----l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~t 406 (474)
+.|-++. |.. ...+.-......|-. -++.+|+.-.+|.--.+ -|.|-|.|++||.|+..
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFP-vamqvs~kygviyviTK-----------~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP-VAMQISEKHDVVFLITK-----------YGYIHLYDLETGTCIYM 295 (494)
T ss_dssp EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCE-EEEEEETTTTEEEEEET-----------TSEEEEEETTTCCEEEE
T ss_pred EEEEEcCCCccCCCCccceeeeeeCCcccccCce-eEEEecccCCEEEEEec-----------CceEEEEecccceeeee
Confidence 6666652 110 000000000111112 24555665566555555 79999999999999976
Q ss_pred ecCC
Q 011970 407 INAT 410 (474)
Q Consensus 407 l~gH 410 (474)
-+=.
T Consensus 296 nrIs 299 (494)
T 1bpo_A 296 NRIS 299 (494)
T ss_dssp EECC
T ss_pred eccc
Confidence 5433
No 328
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.16 E-value=27 Score=37.62 Aligned_cols=256 Identities=7% Similarity=-0.031 Sum_probs=144.4
Q ss_pred cccEEEEEee-ccEEEEeeCCCeEEeeeccccceeeEee---cCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEE
Q 011970 88 RTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLN---VSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 163 (474)
Q Consensus 88 ~~~V~~i~~s-~~~las~s~dgtiklW~~~tg~~l~~l~---g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~ 163 (474)
.+.|.+|... ...|=.|..+|..| || |....... .-....|.+++-.++|...+. . .+ .+
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~GL~r-yD---G~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-T----~~-------Gl 84 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKGLFS-YD---GYSTQQHFTYGENNNTRIYCGVIIDNTYLYMG-T----DN-------GI 84 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSCEEE-EC---SSCEEECSCTTSTTSSCEEEEEEETTTEEEEE-E----TT-------EE
T ss_pred cceEEEEEECCCCCEEEEECCCccc-cC---CCceEEEEccCCCCCceEEEEEEcCCCcEEEE-e----CC-------Ce
Confidence 3568888877 44566677889776 44 43332221 112356999998888875543 2 22 34
Q ss_pred EEeEeccCCCCCccceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEE------EcCCcEEEEEEcCC
Q 011970 164 KIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS------ISDKHVQEIKISPG 237 (474)
Q Consensus 164 ~iw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~t------l~~~~V~~vafSpg 237 (474)
...|..++++.. + .. .....+..+.. .+|.+.+. +.+ -+-.+|.++++...- +....|.++...++
T Consensus 85 ~~yd~~~~~f~~--~-~~-~~~~~i~~i~~--~~g~lWig-t~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~ 156 (758)
T 3ott_A 85 LVYNYRADRYEQ--P-ET-DFPTDVRTMAL--QGDTLWLG-ALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKD 156 (758)
T ss_dssp EEEETTTTEECC--C-SC-CCCSCEEEEEE--ETTEEEEE-ETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTT
T ss_pred EEEeCCCCEEEC--c-cc-CCCceEEEEEe--cCCcEEEE-cCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCC
Confidence 455655544321 0 00 01123445544 36876664 344 466788877764332 22457999988865
Q ss_pred ceEEEEecCCCCccEEEEecCCCeEEEEEeec------CcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccc
Q 011970 238 IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL------LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT 311 (474)
Q Consensus 238 ~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h------~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~ 311 (474)
+.|.++.. .-|..+|.++++.. .+... ...+.++... ..++.|.++.. +-|-.+|..+++......-
T Consensus 157 g~lWigt~----~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d-~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l 229 (758)
T 3ott_A 157 NQIYVGTY----NGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLED-TTRQCVWIGTE-GYLFQYFPSTGQIKQTEAF 229 (758)
T ss_dssp CCEEEEET----TEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEE-TTTTEEEEEEE-EEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEeC----CCHhhCccCCCceE-EecCCCccccccceeEEEEEE-CCCCEEEEEEC-CCCeEEcCCCCeEEeccCC
Confidence 55555532 34777888777643 22211 1125555432 23455666654 4588899888765433211
Q ss_pred cCCceEEEEEcCCCcEEEEEcCCcEEEEeCCCcEEEEeccCC---CCcCCCCeeEEEECCCCCEEEE
Q 011970 312 EFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHL---LWHPDCNTNNIYITSDQDLIIS 375 (474)
Q Consensus 312 h~~~v~sv~Fspdg~llaS~sD~tIklWd~~G~ll~tl~gH~---~~~~~~~v~svafSpDg~~LaS 375 (474)
....|.++...++|.+.+... +-+-++|.....++.+.... ...++-.|++++..++|.+-+.
T Consensus 230 ~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiG 295 (758)
T 3ott_A 230 HNNSIKSLALDGNGDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLG 295 (758)
T ss_dssp EEEEEEEEEECTTCCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEE
T ss_pred CCCeEEEEEEcCCCCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEE
Confidence 234578888888999887654 45777887533333332111 1112234788998888888774
No 329
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.72 E-value=29 Score=37.39 Aligned_cols=312 Identities=13% Similarity=0.057 Sum_probs=167.3
Q ss_pred cEEEEEeeccEEEEeeCCCeEEeeeccccceeeEe---ecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEe
Q 011970 90 KVIEIVAARDIVFALAHSGVCAAFSRETNRRICFL---NVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (474)
Q Consensus 90 ~V~~i~~s~~~las~s~dgtiklW~~~tg~~l~~l---~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw 166 (474)
.|..|...+..|-.++.+| +..++.++++....- .+-+...|.+++..++|...|. . .+ .+...
T Consensus 104 ~i~~i~~~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t----~~-------Gl~~~ 170 (758)
T 3ott_A 104 DVRTMALQGDTLWLGALNG-LYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVG-T----YN-------GLCRY 170 (758)
T ss_dssp CEEEEEEETTEEEEEETTE-EEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEE-E----TT-------EEEEE
T ss_pred eEEEEEecCCcEEEEcCCc-ceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEE-e----CC-------CHhhC
Confidence 4777766655666677775 456787766644331 1223456999999999987663 1 22 22223
Q ss_pred EeccCCCCCccceeeec--cccCceEEEEeCCCCe-EEEEecCCCcEEEeecCCCeEE--EEEcCCcEEEEEEcCCceEE
Q 011970 167 YIRRGKPDSGFALFESE--SLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTML--YSISDKHVQEIKISPGIMLL 241 (474)
Q Consensus 167 ~i~~G~~~~~~~lf~~~--~~~~~~~V~Fs~~nGk-~LaS~s~D~tiKlWdl~tg~~l--~tl~~~~V~~vafSpg~~la 241 (474)
+...+++.. +.+-... ....+.++..+ .+|. +.+ |... -+-.+|.++++.. ..+....|.++...+++.|.
T Consensus 171 ~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d-~~~~~lWi-gt~~-Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW 246 (758)
T 3ott_A 171 IPSNGKFEG-IPLPVHSSQSNLFVNSLLED-TTRQCVWI-GTEG-YLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLL 246 (758)
T ss_dssp ETTTTEEEE-ECCCCCTTCSSCCEEEEEEE-TTTTEEEE-EEEE-EEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEE
T ss_pred ccCCCceEE-ecCCCccccccceeEEEEEE-CCCCEEEE-EECC-CCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEE
Confidence 333333200 0000000 01124567676 4554 333 3333 4667888877643 23445678899888766666
Q ss_pred EEecCCCCccEEEEecCCCeEEEEEeec--------CcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEe-c---
Q 011970 242 IFNRSSSHVPLKILSIEDGTVLKVFYHL--------LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV-S--- 309 (474)
Q Consensus 242 ~~s~~s~D~tIkLWdi~tG~~L~tl~~h--------~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~-l--- 309 (474)
+++. .-+.+++.++++.. .+... ...|.++. +...+.|-+|...| +-+... +...... .
T Consensus 247 igT~----~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~--~D~~g~lWiGT~~G-l~~~~~-~~~~~~~~~~~~ 317 (758)
T 3ott_A 247 AGTD----NGLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIF--ADQEHNIWLGTDYG-ISLSRY-NSALQFIPISQI 317 (758)
T ss_dssp EEET----TEEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEE--ECTTCCEEEEESSS-EEEECC-CC-CEEEEHHHH
T ss_pred EEeC----CceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEE--EcCCCCEEEEeCCc-cccccc-CCceeEEecccC
Confidence 6542 34788888776543 33211 12355554 23356677776666 544432 2221111 0
Q ss_pred --cccCCceEEEEEcCCCcEEEEEcCCcEEEEeCC-Cc--EEEEecc-C-CCCcCCCCeeEEEECCCCCEEEEEecCCCc
Q 011970 310 --RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GE--LVTSFED-H-LLWHPDCNTNNIYITSDQDLIISYCKAEPE 382 (474)
Q Consensus 310 --~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~-G~--ll~tl~g-H-~~~~~~~~v~svafSpDg~~LaS~s~~~~~ 382 (474)
......|.++.-..+|.+.+...+| +-.++.. ++ -...+.. . ......-.|.+++-.++|++-+..
T Consensus 318 ~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt------ 390 (758)
T 3ott_A 318 TGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT------ 390 (758)
T ss_dssp SCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE------
T ss_pred CCCCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe------
Confidence 0123468888778889988765455 4455543 32 1222221 0 011111237889888999987743
Q ss_pred cccccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccccccccccCEEEEEEcCCCCEEEE
Q 011970 383 DQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYT 462 (474)
Q Consensus 383 ~~~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~slafSpDg~~LaS 462 (474)
++-|..+|..+++...-...... . .. ....|.++..+++|+..+.
T Consensus 391 -------~~GL~~~~~~~~~~~~~~~~~~~--~-~~-------------------------~~~~v~~i~~d~~g~lWig 435 (758)
T 3ott_A 391 -------DGSINRYDYATRQFIHYNIVDNT--G-TY-------------------------NTNWTYYIFEDTAGQLWIS 435 (758)
T ss_dssp -------TTEEEEEETTTTEEEEEEEECCC-----C-------------------------BSSSEEEEEECTTSEEEEE
T ss_pred -------CCcHhhcCcCCCcEEEeecCCCc--C-CC-------------------------CCceEEEEEEcCCCCEEEE
Confidence 45688999888876432211110 0 00 0127899999999987664
Q ss_pred EcCCCcE
Q 011970 463 GNRHGLV 469 (474)
Q Consensus 463 gs~DgtV 469 (474)
....|..
T Consensus 436 T~~~Gl~ 442 (758)
T 3ott_A 436 TCLGGIF 442 (758)
T ss_dssp ESSSCEE
T ss_pred ECCCceE
Confidence 4444544
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.63 E-value=16 Score=34.28 Aligned_cols=193 Identities=9% Similarity=0.004 Sum_probs=99.8
Q ss_pred CCeEEEEecCC----CcEEEeecCCCeEE--EEEcCC--cEEEEEEcCCceEEEEecC---CCCccEEEEecCCCeEEEE
Q 011970 197 NGKVLTYSAQD----SIYKVFDLKNYTML--YSISDK--HVQEIKISPGIMLLIFNRS---SSHVPLKILSIEDGTVLKV 265 (474)
Q Consensus 197 nGk~LaS~s~D----~tiKlWdl~tg~~l--~tl~~~--~V~~vafSpg~~la~~s~~---s~D~tIkLWdi~tG~~L~t 265 (474)
++++++.|+.+ ..+-++|+.+.+-. ..++.. .-..+.+ .+.+++.++.. .....+.++|+++.+-...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 68898888865 66788898887632 223221 1112222 44444444321 1113588999998765332
Q ss_pred EeecCcce-eEEEEEecCCCeEEE-EeC---------CCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-C
Q 011970 266 FYHLLHRN-KKVDFIEQFNEKLLV-KQE---------NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N 333 (474)
Q Consensus 266 l~~h~~~v-~~V~F~~~~~~~ll~-~~~---------D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D 333 (474)
-.-...+. ..+... +++|.+ ++. -..+.++|+.+.+-.+...-........+...++++++-|+ +
T Consensus 134 ~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 210 (306)
T 3ii7_A 134 PSMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQN 210 (306)
T ss_dssp CCCSSCCBSCEEEEE---TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEE
T ss_pred CCCcCCcceeEEEEE---CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCC
Confidence 11111111 122222 345544 542 35588999999876655211111111112233788888875 3
Q ss_pred -----CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 334 -----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 334 -----~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
..|.++|...+.-..+..-... ......+.+ ++++++.|+..+. +.-..|.++|+.+.+-
T Consensus 211 ~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~--~~~i~v~GG~~~~------~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWKMVSPMPWK--GVTVKCAAV--GSIVYVLAGFQGV------GRLGHILEYNTETDKW 275 (306)
T ss_dssp TTEEBCCEEEEETTTTEEEECCCCSCC--BSCCEEEEE--TTEEEEEECBCSS------SBCCEEEEEETTTTEE
T ss_pred CCCCCceEEEeeCCCCcEEECCCCCCC--ccceeEEEE--CCEEEEEeCcCCC------eeeeeEEEEcCCCCeE
Confidence 3678889864433333221111 111122333 7888888764211 1135788999888754
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=88.27 E-value=5.3 Score=40.18 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=65.9
Q ss_pred EEEEecCCCcEEEeecCCCeEEEEEcCC---cEEEEE-Ec-C-CceEEEEecCCCCccEEEEecCCCeEEEEEeec-Ccc
Q 011970 200 VLTYSAQDSIYKVFDLKNYTMLYSISDK---HVQEIK-IS-P-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL-LHR 272 (474)
Q Consensus 200 ~LaS~s~D~tiKlWdl~tg~~l~tl~~~---~V~~va-fS-p-g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h-~~~ 272 (474)
++.-++.||.+.-.|.++|+.+.++... .+.... .. + ++.+++..+ ..|+.|.-+|.++|.....+.-. .-.
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p-~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEP-FGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECC-STTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEE-CCCCEEEEEECCCCcEEeeecccccee
Confidence 4444667888888888888888877643 111110 00 1 223333321 34788888898888666554410 000
Q ss_pred eeEEEEE------e----cCCCeEEEEeCCCcEEEEECCCCceEEecc
Q 011970 273 NKKVDFI------E----QFNEKLLVKQENENLQILDVRNAELMEVSR 310 (474)
Q Consensus 273 v~~V~F~------~----~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~ 310 (474)
...+.+. . ..++.+.+++.++++--.|+++|+.+..+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 0011110 0 046788899999999999999999987754
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.20 E-value=17 Score=34.08 Aligned_cols=194 Identities=7% Similarity=-0.011 Sum_probs=93.7
Q ss_pred CeEEEEecC--CCcEEEeecCCCeEEE--EEcCCc-EEEEEEcCCceEEEEecC-CCCccEEEEecCCCeEEEEEeecCc
Q 011970 198 GKVLTYSAQ--DSIYKVFDLKNYTMLY--SISDKH-VQEIKISPGIMLLIFNRS-SSHVPLKILSIEDGTVLKVFYHLLH 271 (474)
Q Consensus 198 Gk~LaS~s~--D~tiKlWdl~tg~~l~--tl~~~~-V~~vafSpg~~la~~s~~-s~D~tIkLWdi~tG~~L~tl~~h~~ 271 (474)
+.+++.|+. ...+.++|..+.+-.. .++... =.+++.-.+.+++.++.. ..-..+.++|+.+++-...-.-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 445555554 3567788887766321 222110 012222244444443221 1124588899998765432221111
Q ss_pred ce-eEEEEEecCCCeEEEEeCC------CcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-C---------C
Q 011970 272 RN-KKVDFIEQFNEKLLVKQEN------ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N---------R 334 (474)
Q Consensus 272 ~v-~~V~F~~~~~~~ll~~~~D------~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D---------~ 334 (474)
+. ..+.. .++..++.|+.+ ..+.++|..+.+-.+...-........+...++++++.|. + .
T Consensus 92 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 92 RDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp CBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECC
T ss_pred ccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccc
Confidence 11 22222 223444456654 5688999999876554211111111111224788888775 2 3
Q ss_pred cEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 335 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 335 tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
.+.++|.....-..+....... ..-..+.+ ++++++.|+.... ..-..|.++|+.+++-
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~--~~~i~v~GG~~~~------~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEAR--KNHGLVFV--KDKIFAVGGQNGL------GGLDNVEYYDIKLNEW 228 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCC--BSCEEEEE--TTEEEEECCEETT------EEBCCEEEEETTTTEE
T ss_pred eEEEeCCCCCeEEECCCccchh--hcceEEEE--CCEEEEEeCCCCC------CCCceEEEeeCCCCcE
Confidence 4788898644334443211111 11112222 7788887764111 0124688899877653
No 333
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=87.94 E-value=6.2 Score=37.97 Aligned_cols=98 Identities=7% Similarity=-0.073 Sum_probs=59.1
Q ss_pred cceeEEEEEecCCCeEEEEeCCCcEEEEECCCCce-------EEecc-ccCCceEEEEEcCCCcEEEEEcCCcEEEEeC-
Q 011970 271 HRNKKVDFIEQFNEKLLVKQENENLQILDVRNAEL-------MEVSR-TEFMTPSAFIFLYENQLFLTFRNRTVAVWNF- 341 (474)
Q Consensus 271 ~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~-------~~~l~-~h~~~v~sv~Fspdg~llaS~sD~tIklWd~- 341 (474)
+....++|.| ++.|-+. .++.+.--+..+++. .++-. +..+ -.++.|-|+|.|.++ +|+.|-=|+-
T Consensus 41 ~~~~~laf~P--~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav-~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSP--GGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV-SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECT--TSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE-ETTEEEEESCC
T ss_pred ccceeEEECC--CccEEEE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe-CCCEEEEeCCC
Confidence 3566889885 4445444 566555555545222 11111 1111 367889999999999 8898877775
Q ss_pred -CCcE----EEEeccCCCCcCCCCeeEEEECCCCCEEEEE
Q 011970 342 -RGEL----VTSFEDHLLWHPDCNTNNIYITSDQDLIISY 376 (474)
Q Consensus 342 -~G~l----l~tl~gH~~~~~~~~v~svafSpDg~~LaS~ 376 (474)
++.- -.+.-+...|- .+..|+|.|||.+-|-.
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~---~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWS---GFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGG---GEEEEEECTTSCEEEEE
T ss_pred cCCCCceeccccEeccCCCC---ceEEEEECCCceEEEEe
Confidence 2321 01222333453 26889999999998864
No 334
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.02 E-value=15 Score=38.25 Aligned_cols=113 Identities=11% Similarity=0.083 Sum_probs=66.8
Q ss_pred EEEEEeecCcceeEEEEEecCCC-eEEEEeCCCcEEEEECCCCc---eEEecc-----c----cCCceEEEEEcCC----
Q 011970 262 VLKVFYHLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRNAE---LMEVSR-----T----EFMTPSAFIFLYE---- 324 (474)
Q Consensus 262 ~L~tl~~h~~~v~~V~F~~~~~~-~ll~~~~D~tIkIWDv~tg~---~~~~l~-----~----h~~~v~sv~Fspd---- 324 (474)
++.++..-+..-+.++|. |++. +|+++...+.|++++..... .+..+. + .......|+|.|+
T Consensus 5 ~v~~va~gL~~P~~~a~~-pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 5 CIQEVVSGLRQPVGALHS-GDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEEEESSEEEEECC-SSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred EEEEeccCCCCceEEEEC-CCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 344444333456889987 4553 79999889999999754321 111111 1 1345678999996
Q ss_pred CcEEEEEc-CC------------cEEEEeCC-C----------cEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEec
Q 011970 325 NQLFLTFR-NR------------TVAVWNFR-G----------ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 325 g~llaS~s-D~------------tIklWd~~-G----------~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
+.+.++-+ +. .|.-|.++ + +.|.++......|. ...|+|.|||.+.++-+.
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~---g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL---GGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC---EEEEEECTTSCEEEEECC
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc---CCcEeECCCCcEEEEeCC
Confidence 78888765 21 23335442 1 23333331122232 478999999999998764
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.85 E-value=4.1 Score=44.31 Aligned_cols=101 Identities=12% Similarity=0.035 Sum_probs=65.8
Q ss_pred cEEEEECCC----CceEEeccccCCceEEEEEcCCCcEEEEEc--CCcEEEEeCC-------CcE-------EEEeccCC
Q 011970 294 NLQILDVRN----AELMEVSRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-------GEL-------VTSFEDHL 353 (474)
Q Consensus 294 tIkIWDv~t----g~~~~~l~~h~~~v~sv~Fspdg~llaS~s--D~tIklWd~~-------G~l-------l~tl~gH~ 353 (474)
.+++.|.+. +.-+..+..-...+-.+-++|||++++.+. +.||-+.|++ +++ +...+--.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 588999876 332221122233455688999999999887 9999999975 222 33444222
Q ss_pred CCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCC----------eEEEEecCCC
Q 011970 354 LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG----------KCLAKINATN 411 (474)
Q Consensus 354 ~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG----------~cl~tl~gH~ 411 (474)
+ -.-.+|.++|. .-+... -|..|--||+... ..+.++.-|-
T Consensus 379 G------PlHt~Fd~~G~-aYTtlf----------idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y 429 (638)
T 3sbq_A 379 G------PLHTTFDGRGN-AYTTLF----------IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY 429 (638)
T ss_dssp C------EEEEEECSSSE-EEEEET----------TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS
T ss_pred c------ccEEEECCCCc-eEeeee----------ecceEEEEeccHHHHHhcCccCCeeeecccccc
Confidence 2 26789999994 444333 3888999999754 4667776654
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.85 E-value=26 Score=32.98 Aligned_cols=193 Identities=10% Similarity=-0.017 Sum_probs=98.0
Q ss_pred CCeEEEEecC----C-----CcEEEeecCCCeEEE--EEcC--CcEEEEEEcCCceEEEEecCCC--CccEEEEecCCCe
Q 011970 197 NGKVLTYSAQ----D-----SIYKVFDLKNYTMLY--SISD--KHVQEIKISPGIMLLIFNRSSS--HVPLKILSIEDGT 261 (474)
Q Consensus 197 nGk~LaS~s~----D-----~tiKlWdl~tg~~l~--tl~~--~~V~~vafSpg~~la~~s~~s~--D~tIkLWdi~tG~ 261 (474)
++++++.|+. + ..+-++|+.+.+-.. .+.. ..-..+. ..+.+++.++.... ...+..+|+++.+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 6788888776 2 357788888766322 2221 1111222 24444444322111 1358889998876
Q ss_pred EEEEEeecCcce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCceEEecc--ccCCceEEEEEcCCCcEEEEEc-
Q 011970 262 VLKVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVSR--TEFMTPSAFIFLYENQLFLTFR- 332 (474)
Q Consensus 262 ~L~tl~~h~~~v-~~V~F~~~~~~~ll~~~~D-----~tIkIWDv~tg~~~~~l~--~h~~~v~sv~Fspdg~llaS~s- 332 (474)
-...-.-...+. ..+... ++..++.|+.+ ..+.++|+.+.+-.+... ..-....++. .++++++-|+
T Consensus 149 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~ 224 (308)
T 1zgk_A 149 WHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV--LHNCIYAAGGY 224 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCB
T ss_pred EeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE--ECCEEEEEeCC
Confidence 433211111111 122222 24444446543 568899999887654421 1111112232 3788888876
Q ss_pred C-----CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 333 N-----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 333 D-----~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
+ ..+.++|+..+.-..+..-.. +......+. -++++++-|+.... ..-..|-++|+.+.+-.
T Consensus 225 ~~~~~~~~v~~yd~~~~~W~~~~~~p~--~r~~~~~~~--~~~~i~v~GG~~~~------~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 225 DGQDQLNSVERYDVETETWTFVAPMKH--RRSALGITV--HQGRIYVLGGYDGH------TFLDSVECYDPDTDTWS 291 (308)
T ss_dssp CSSSBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEE--ETTEEEEECCBCSS------CBCCEEEEEETTTTEEE
T ss_pred CCCCccceEEEEeCCCCcEEECCCCCC--CccceEEEE--ECCEEEEEcCcCCC------cccceEEEEcCCCCEEe
Confidence 4 468899986444433332111 111112222 37888887764210 11357889998877643
No 337
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.21 E-value=28 Score=32.78 Aligned_cols=195 Identities=10% Similarity=0.002 Sum_probs=96.2
Q ss_pred CCCeEEEEecC----CCcEEEeecCCCeEEE--EEcCC-cEEEEEEcCCceEEEEec----C--CCCccEEEEecCCCeE
Q 011970 196 VNGKVLTYSAQ----DSIYKVFDLKNYTMLY--SISDK-HVQEIKISPGIMLLIFNR----S--SSHVPLKILSIEDGTV 262 (474)
Q Consensus 196 ~nGk~LaS~s~----D~tiKlWdl~tg~~l~--tl~~~-~V~~vafSpg~~la~~s~----~--s~D~tIkLWdi~tG~~ 262 (474)
.++++++.|+. -..+.++|+.+.+-.. .++.. .-.+++...+.+++.++. . .....+.++|+.+.+-
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 36777777773 2357888888776322 22211 111222234444444321 0 0013588899988764
Q ss_pred EEEEeecCcce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCceEEecc--ccCCceEEEEEcCCCcEEEEEc-C
Q 011970 263 LKVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVSR--TEFMTPSAFIFLYENQLFLTFR-N 333 (474)
Q Consensus 263 L~tl~~h~~~v-~~V~F~~~~~~~ll~~~~D-----~tIkIWDv~tg~~~~~l~--~h~~~v~sv~Fspdg~llaS~s-D 333 (474)
...-.-...+. ..+... ++..++.|+.+ ..+.++|+.+.+-.+... ..-....++. .++++++-|+ +
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 178 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV--LNRLLYAVGGFD 178 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE--ECCEEEEEeCCC
Confidence 33211111111 222222 23444445532 568899999887655421 1111112222 3788888876 4
Q ss_pred -----CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 334 -----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 334 -----~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
..+.++|...+.-..+..-.. +...-..+.+ ++++++.|+..+. ..-..+.++|+.+++-.
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~--~~~iyv~GG~~~~------~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNT--IRSGAGVCVL--HNCIYAAGGYDGQ------DQLNSVERYDVETETWT 244 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEE--TTEEEEECCBCSS------SBCCCEEEEETTTTEEE
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCC--ccccceEEEE--CCEEEEEeCCCCC------CccceEEEEeCCCCcEE
Confidence 358888886443333332111 1111122333 7888887764110 11356889998877543
No 338
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=83.89 E-value=55 Score=35.92 Aligned_cols=190 Identities=12% Similarity=0.056 Sum_probs=96.3
Q ss_pred EEeCCCCeEEEEe-----cCCCcEEEeecCCCeEEE-EEc-C-C--cEEEE-----EEcCCceEEEEe--------cCCC
Q 011970 192 EFDDVNGKVLTYS-----AQDSIYKVFDLKNYTMLY-SIS-D-K--HVQEI-----KISPGIMLLIFN--------RSSS 248 (474)
Q Consensus 192 ~Fs~~nGk~LaS~-----s~D~tiKlWdl~tg~~l~-tl~-~-~--~V~~v-----afSpg~~la~~s--------~~s~ 248 (474)
.|+ |||++++.+ |.-.+++++|++|++.+- .+. . + .+..+ ++-++..+..+. ..+.
T Consensus 136 ~~~-~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~ 214 (711)
T 4hvt_A 136 NCF-QNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLY 214 (711)
T ss_dssp ECS-SSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSS
T ss_pred ecC-CCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCC
Confidence 376 788877753 345589999999998752 122 0 0 01112 333334443321 0111
Q ss_pred CccEEEEecCCCe--EEEEEeecCcce-eEEEEEecCCCe----EEEE-e---CCCcEEEEECCC--CceEEeccccCCc
Q 011970 249 HVPLKILSIEDGT--VLKVFYHLLHRN-KKVDFIEQFNEK----LLVK-Q---ENENLQILDVRN--AELMEVSRTEFMT 315 (474)
Q Consensus 249 D~tIkLWdi~tG~--~L~tl~~h~~~v-~~V~F~~~~~~~----ll~~-~---~D~tIkIWDv~t--g~~~~~l~~h~~~ 315 (474)
-..|++|.+-|.. -...|++....+ ..+. ...+++. +++. + ....+.+.|... ++..+.......
T Consensus 215 ~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 292 (711)
T 4hvt_A 215 PNSLYIWKRGESIEKAKKLFEVPKEYIYVSAG-KLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDA- 292 (711)
T ss_dssp BCEEEEEETTSCGGGCEEEEECCTTSCEEEEE-ESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTC-
T ss_pred CCEEEEEECCCChHHCeEEeccCCCceEEEEE-EecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcc-
Confidence 2468899875432 123454332222 1222 2244442 3443 3 224455666553 665554322221
Q ss_pred eEEEEEcCCCcEEEEEc-----------CCcEEEEeCC-Cc-------EEEE-eccCCCCcCCCCeeEEEECCCCCEEEE
Q 011970 316 PSAFIFLYENQLFLTFR-----------NRTVAVWNFR-GE-------LVTS-FEDHLLWHPDCNTNNIYITSDQDLIIS 375 (474)
Q Consensus 316 v~sv~Fspdg~llaS~s-----------D~tIklWd~~-G~-------ll~t-l~gH~~~~~~~~v~svafSpDg~~LaS 375 (474)
.++.++++++++... .+.|-+.|+. +. -.++ +..... ..+.++.+++| .++++
T Consensus 293 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~-~l~~~ 365 (711)
T 4hvt_A 293 --TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTAN----EVFNFISTTKD-RVFLA 365 (711)
T ss_dssp --EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTT----EEEEEEEECSS-CEEEE
T ss_pred --eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCC----CeEEEEEEECC-EEEEE
Confidence 234566788877432 4456667763 21 1222 332222 23678888876 67777
Q ss_pred EecCCCccccccCCCC--eEEEEeCCCCe
Q 011970 376 YCKAEPEDQWMEGSAG--SINVSSILTGK 402 (474)
Q Consensus 376 ~s~~~~~~~~~~s~Dg--tIklWdi~tG~ 402 (474)
+.. ++ .|.++|+.+|+
T Consensus 366 ~~~-----------~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 366 TYD-----------NVVAKVVTFTLENEQ 383 (711)
T ss_dssp EEE-----------TTEEEEEEECEETTE
T ss_pred EEE-----------CCEEEEEEEECCCCc
Confidence 765 54 46777776775
No 339
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.70 E-value=26 Score=39.78 Aligned_cols=35 Identities=26% Similarity=0.158 Sum_probs=29.5
Q ss_pred eEEEEeCCCCeEEEEecCCCcEEEeecCCCeEEEEE
Q 011970 189 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI 224 (474)
Q Consensus 189 ~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl 224 (474)
-+++.. ++..+|.+-+.|+++|+|++.+|+|+.+.
T Consensus 239 ~~~~~~-~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 239 ISMIFL-STYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEEE-TTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEeec-CCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 355565 57778889999999999999999999876
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=83.30 E-value=77 Score=38.25 Aligned_cols=193 Identities=15% Similarity=0.147 Sum_probs=100.5
Q ss_pred CCCeEEEEecCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEecCCCCccEEEEecCC-CeEEEEEeecC--c
Q 011970 196 VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLL--H 271 (474)
Q Consensus 196 ~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~-~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~t-G~~L~tl~~h~--~ 271 (474)
|..++||==+ ..++.|+|+.+-+.+++.. ...|-=-+|-...+|+.-+ +..|.-|++++ -.+.+.|.-|. .
T Consensus 75 P~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT----~~aVyHW~~~~~s~P~k~fdR~~~L~ 149 (1630)
T 1xi4_A 75 PASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT----DNAVYHWSMEGESQPVKMFDRHSSLA 149 (1630)
T ss_pred CCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc----CCeEEEeccCCCCccHHHHhcchhcc
Confidence 6778888665 6899999999877776654 3344333444445555543 35699999963 24555565441 1
Q ss_pred ceeEEEEEe-cCCCeEEE-E------eCCCcEEEEECCCCceEEeccccCCceEEEEEc---CCCcEEEEEcC----CcE
Q 011970 272 RNKKVDFIE-QFNEKLLV-K------QENENLQILDVRNAELMEVSRTEFMTPSAFIFL---YENQLFLTFRN----RTV 336 (474)
Q Consensus 272 ~v~~V~F~~-~~~~~ll~-~------~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fs---pdg~llaS~sD----~tI 336 (474)
...=+.+-. ++..-++. | .-.|.++|+.++.+. -+.+.||...--.+.+. +..++|.-+.. +.+
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kL 228 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 228 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceE
Confidence 111222221 22333332 2 145899999987654 34556776443333331 22334332222 456
Q ss_pred EEEeCC-C-cEEEEeccC-------CCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEE
Q 011970 337 AVWNFR-G-ELVTSFEDH-------LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK 406 (474)
Q Consensus 337 klWd~~-G-~ll~tl~gH-------~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~t 406 (474)
.|-++. . .--..|..- .....|-. -++.+|+.-.+|.--.+ -|.|-+.|+.||.|+..
T Consensus 229 hi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfp-v~~~vs~k~g~iy~itk-----------~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP-VAMQISEKHDVVFLITK-----------YGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEEecCCCccCCCCCccccccccCCcccccCcc-eEEEeccccCEEEEEec-----------CceEEEEecccchhhhh
Confidence 666651 1 000011000 00000111 13444444444444444 79999999999999854
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.36 E-value=17 Score=39.53 Aligned_cols=125 Identities=10% Similarity=0.143 Sum_probs=79.3
Q ss_pred EEEEEecCCCeEEEEe-CCCcEEEEECCC------Cce------EEeccccCCceEEEEEcCCCcEEEEEc-CCcEEEEe
Q 011970 275 KVDFIEQFNEKLLVKQ-ENENLQILDVRN------AEL------MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 340 (474)
Q Consensus 275 ~V~F~~~~~~~ll~~~-~D~tIkIWDv~t------g~~------~~~l~~h~~~v~sv~Fspdg~llaS~s-D~tIklWd 340 (474)
.|.++ |+|.++++++ -+.++-+.|++. +++ +..-..-.-.+.-.+|.++|....|-- |..|--||
T Consensus 327 Gv~vs-PDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 327 GCNTS-SDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CEEEC-TTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ceeeC-CCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 34544 7888888876 899999999884 211 111111224677789999997777777 99999999
Q ss_pred CC-C----------cEEEEeccCCCCcCCCCeeEEEE------CCCCCEEEEEecCCCccccccC--CCCeEEEEeCCCC
Q 011970 341 FR-G----------ELVTSFEDHLLWHPDCNTNNIYI------TSDQDLIISYCKAEPEDQWMEG--SAGSINVSSILTG 401 (474)
Q Consensus 341 ~~-G----------~ll~tl~gH~~~~~~~~v~svaf------SpDg~~LaS~s~~~~~~~~~~s--~DgtIklWdi~tG 401 (474)
+. . ..+..+.-|... --+.- .|||++|+|.++-.+|-=+..| .-.+-.|.|| +|
T Consensus 406 i~~a~~~~~g~~~~~v~~k~dv~Yqp------GH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidI-sG 478 (638)
T 3sbq_A 406 MEEAVRAYKGEKVNYIKQKLDVHYQP------GHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDI-SG 478 (638)
T ss_dssp HHHHHHHHTTCCCCCEEEEEECSSCE------EEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEEC-SS
T ss_pred ccHHHHHhcCccCCeeeeccccccCC------cccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEec-CC
Confidence 74 3 467777777653 23333 7899999999984332111111 1123467887 56
Q ss_pred eEEEEe
Q 011970 402 KCLAKI 407 (474)
Q Consensus 402 ~cl~tl 407 (474)
.-+.-+
T Consensus 479 dkM~lv 484 (638)
T 3sbq_A 479 DEMKLV 484 (638)
T ss_dssp SSCEEE
T ss_pred CceEEE
Confidence 544433
No 342
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.78 E-value=1.4 Score=51.09 Aligned_cols=37 Identities=14% Similarity=0.277 Sum_probs=32.5
Q ss_pred eeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEec
Q 011970 361 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 408 (474)
Q Consensus 361 v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~ 408 (474)
+.+++.++|..+|++-|. |+++||||+.+|+|+++..
T Consensus 240 ~vs~~~~~~~~~lftL~~-----------D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSL-----------DYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBT-----------TCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeC-----------CCEEEEEECCCCCeEEeec
Confidence 356778899999999887 9999999999999999853
No 343
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=77.63 E-value=65 Score=32.78 Aligned_cols=149 Identities=15% Similarity=0.248 Sum_probs=87.1
Q ss_pred CCcEEEeecCCCeEE--EEEcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCC
Q 011970 207 DSIYKVFDLKNYTML--YSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNE 284 (474)
Q Consensus 207 D~tiKlWdl~tg~~l--~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~ 284 (474)
+.+|-+-|++++... +.+..+ +...+|...+++.- + ..++.|+|+++-+.|+++.-
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~Ad---sAIMnP~~~ViALr-a--g~~LQiFnletK~klks~~~---------------- 105 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALK-A--GKTLQIFNIEMKSKMKAHTM---------------- 105 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCS---EEEECSSSSEEEEE-E--TTEEEEEETTTTEEEEEEEC----------------
T ss_pred CCEEEEEECCCCCCccccccccc---eeeeCCCccEEEEe-c--CCeEEEechHHhhhhcceec----------------
Confidence 346778888876532 233322 23346643333221 1 25678888877777776652
Q ss_pred eEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEcCCcEEEEeCCC--cEEEEeccCCCCcCCCCee
Q 011970 285 KLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG--ELVTSFEDHLLWHPDCNTN 362 (474)
Q Consensus 285 ~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~sD~tIklWd~~G--~ll~tl~gH~~~~~~~~v~ 362 (474)
++.|-.|-.-+-+.+ +=-.+..|--|+++| +.++-|+-|..- .+|.+-
T Consensus 106 -------~e~VvfWkWis~~~L----------------------~lVT~taVyHWs~~~~s~P~kvFdR~~~L-~~~QII 155 (365)
T 2xzh_A 106 -------TDDVTFWKWISLNTV----------------------ALVTDNAVYHWSMEGESQPVKMFDRHSSL-AGCQII 155 (365)
T ss_dssp -------SSCEEEEEECSSSEE----------------------EEEESSEEEEEESSTTCCCEEEEECCGGG-TTCEEE
T ss_pred -------CCccEEEEecCCCeE----------------------EEEcCCcEEEEcccCCCCCceeeecchhc-ccceEE
Confidence 223444543332222 112255677788854 577778777664 356677
Q ss_pred EEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCCCC
Q 011970 363 NIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNC 412 (474)
Q Consensus 363 svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH~~ 412 (474)
+-..++|+++++-.+-+..+. .-.|.+-|+.++ .+.-+.|+||..
T Consensus 156 nY~~d~~~kW~~l~GI~~~~~----~v~G~mQLYS~e-r~~sQ~ieGhaa 200 (365)
T 2xzh_A 156 NYRTDAKQKWLLLTGISAQQN----RVVGAMQLYSVD-RKVSQPIEGHAA 200 (365)
T ss_dssp EEEECTTSCEEEEEEEEEETT----EEEEEEEEEETT-TTEEEEECCSEE
T ss_pred EEEECCCCCEEEEEeEeccCC----ccceeEEEEeec-ccccceeeeeee
Confidence 788899999887665421111 125889999985 455577888874
No 344
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.14 E-value=8.5 Score=41.70 Aligned_cols=69 Identities=9% Similarity=0.121 Sum_probs=44.1
Q ss_pred eEEEECCCCCEEEEEecCCCccc-cccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCcccccccccccccc
Q 011970 362 NNIYITSDQDLIISYCKAEPEDQ-WMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRST 440 (474)
Q Consensus 362 ~svafSpDg~~LaS~s~~~~~~~-~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (474)
-+|+|+|+|.+++.-..+..+.. ...-....+-.-+..+|+..+-+.++..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---------------------------- 530 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---------------------------- 530 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT----------------------------
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC----------------------------
Confidence 57999999999886432100000 0000012344446677888777777653
Q ss_pred ccccccCEEEEEEcCCCCEEEEE
Q 011970 441 VGEALEDITSLFYDEERNEIYTG 463 (474)
Q Consensus 441 ~~~~l~~V~slafSpDg~~LaSg 463 (474)
..++.++|+|||++|...
T Consensus 531 -----aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 -----CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp -----CEEEEEEECTTSSEEEEE
T ss_pred -----ccCcCeeECCCCCEEEEE
Confidence 179999999999999765
No 345
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.68 E-value=14 Score=40.05 Aligned_cols=71 Identities=8% Similarity=0.106 Sum_probs=43.9
Q ss_pred eeEEEECCCCCEEEEEecCCCccc-cccCCCCeEEEEeCCCCeEEEEecCCCCCCCCccccCCCCCCccccccccccccc
Q 011970 361 TNNIYITSDQDLIISYCKAEPEDQ-WMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRS 439 (474)
Q Consensus 361 v~svafSpDg~~LaS~s~~~~~~~-~~~s~DgtIklWdi~tG~cl~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (474)
-++|+|.++|.+.+.-..+..... ...-..+.+-..+..+|+....+.+...
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~--------------------------- 530 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG--------------------------- 530 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT---------------------------
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC---------------------------
Confidence 478999999999995321100000 0000122455557667887666654331
Q ss_pred cccccccCEEEEEEcCCCCEEEEEc
Q 011970 440 TVGEALEDITSLFYDEERNEIYTGN 464 (474)
Q Consensus 440 ~~~~~l~~V~slafSpDg~~LaSgs 464 (474)
..++.++||||+++|+.+-
T Consensus 531 ------aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 531 ------CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp ------CEEEEEEECTTSSEEEEEE
T ss_pred ------ccccCCEECCCCCEEEEEE
Confidence 1689999999999998764
No 346
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=70.61 E-value=3.8 Score=45.52 Aligned_cols=32 Identities=3% Similarity=0.067 Sum_probs=28.1
Q ss_pred CCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecC
Q 011970 367 TSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 409 (474)
Q Consensus 367 SpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~g 409 (474)
.++..+|++-|. |.++||||+.||+|+++..-
T Consensus 228 ~~~~~fLftL~~-----------Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLTQ-----------NCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEET-----------TCEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEEc-----------CCeEEEEEcCCCceEEeecc
Confidence 456889999887 99999999999999998755
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=70.53 E-value=63 Score=30.81 Aligned_cols=146 Identities=9% Similarity=0.018 Sum_probs=69.8
Q ss_pred ccEEEEecCCCeEEEE--EeecCcce-eEEEEEecCCCeEEEEeC------CCcEEEEEC--CCCceEEeccc--cCCce
Q 011970 250 VPLKILSIEDGTVLKV--FYHLLHRN-KKVDFIEQFNEKLLVKQE------NENLQILDV--RNAELMEVSRT--EFMTP 316 (474)
Q Consensus 250 ~tIkLWdi~tG~~L~t--l~~h~~~v-~~V~F~~~~~~~ll~~~~------D~tIkIWDv--~tg~~~~~l~~--h~~~v 316 (474)
..+.++|+++.+-... +.. ..+. .++... .+..++.|+. -..+.++|+ .+.+-.+...- .....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~-~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPW-YGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA 244 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSS-CCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB
T ss_pred ccEEEEeCCCCcEEECCCCCC-CCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc
Confidence 4688999988764332 221 0111 233322 2334444553 245677887 66655443111 10011
Q ss_pred EEEEEcCCCcEEEEEc-C----------------------CcEEEEeCC-C--cEEEEeccCCCCcCCCCeeEEEECCCC
Q 011970 317 SAFIFLYENQLFLTFR-N----------------------RTVAVWNFR-G--ELVTSFEDHLLWHPDCNTNNIYITSDQ 370 (474)
Q Consensus 317 ~sv~Fspdg~llaS~s-D----------------------~tIklWd~~-G--~ll~tl~gH~~~~~~~~v~svafSpDg 370 (474)
...+...++++++-|. + ..+.++|++ . +.+..+...... ..++.-++
T Consensus 245 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-------~~~~~~~~ 317 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY-------GVSLPWNN 317 (357)
T ss_dssp SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS-------SEEEEETT
T ss_pred cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc-------ceeEEeCC
Confidence 1123345778888775 3 257789985 3 234444322222 12334588
Q ss_pred CEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 371 DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 371 ~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
++++-|+..... ..-..|-+.++.++|.+..-.-|
T Consensus 318 ~i~v~GG~~~~~-----~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 318 SLLIIGGETAGG-----KAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp EEEEEEEECGGG-----CEEEEEEEEEC-CCSCEEEC---
T ss_pred EEEEEeeeCCCC-----CEeeeEEEEEEcCcEeEeeeccc
Confidence 888888752100 00134555588888887655443
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=70.41 E-value=11 Score=37.92 Aligned_cols=112 Identities=13% Similarity=0.151 Sum_probs=65.1
Q ss_pred CeEEEEeCCCcEEEEECCCCceEEecccc-CCceEEEE---EcCCCcEEEEE-c-CCcEEEEeCC-CcEEEEeccCCCCc
Q 011970 284 EKLLVKQENENLQILDVRNAELMEVSRTE-FMTPSAFI---FLYENQLFLTF-R-NRTVAVWNFR-GELVTSFEDHLLWH 356 (474)
Q Consensus 284 ~~ll~~~~D~tIkIWDv~tg~~~~~l~~h-~~~v~sv~---Fspdg~llaS~-s-D~tIklWd~~-G~ll~tl~gH~~~~ 356 (474)
+.+++++.||.|.-.|..+|+.+-.+... ...+.... ...++..++-. . ||.+-.+|.+ |.....+.-.....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 67888999999999999999988665443 11222110 01133444432 3 7777777763 64443332111100
Q ss_pred CCCCeeEEEEC-----------CCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecCC
Q 011970 357 PDCNTNNIYIT-----------SDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 357 ~~~~v~svafS-----------pDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~gH 410 (474)
...+.++ .++..+..|+. +|++---|+.||+.+.++..-
T Consensus 91 ----~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~-----------~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 ----TSPLHLKTNIVVNDSGKIVEDEKVYTGSM-----------RTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp ----TCSEEEECC----------CCEEEEECEE-----------EEEEEEEETTTCCEEEEESTT
T ss_pred ----ccccccCCCceeecccccccCCEEEEEec-----------CCEEEEEECCCCcEEEEEecC
Confidence 0012211 13445555666 899999999999999998643
No 349
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=65.15 E-value=52 Score=28.40 Aligned_cols=106 Identities=13% Similarity=0.083 Sum_probs=59.0
Q ss_pred CCCcEEEEECCCCceEEeccccC-CceEEEEEcCC---C-cEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCe--
Q 011970 291 ENENLQILDVRNAELMEVSRTEF-MTPSAFIFLYE---N-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNT-- 361 (474)
Q Consensus 291 ~D~tIkIWDv~tg~~~~~l~~h~-~~v~sv~Fspd---g-~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v-- 361 (474)
.+++.+|-+..+|+|+.+..+.. ....-..+... . +..+... ++..+|-+.. |.|+..-.+.... +..|
T Consensus 25 ~~g~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~--G~~v~~ 102 (165)
T 3pg0_A 25 GDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSD--GANVIQ 102 (165)
T ss_dssp -CCEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCST--TCBEEE
T ss_pred CCCEEEEEECCCCCEEEeCCCCCCCCCEEEEECCCCCccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCC--CCEEEE
Confidence 57888888888899988754321 11111223221 2 3333333 7888888884 8888654332110 0001
Q ss_pred eEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecC
Q 011970 362 NNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 409 (474)
Q Consensus 362 ~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~g 409 (474)
+...=.+++++.+... .+|..+|-+..+|+||..-.+
T Consensus 103 ~~c~~~~~Q~W~~~~~-----------g~g~~~i~~~~sg~cLdv~~~ 139 (165)
T 3pg0_A 103 YSYSGGDNQQWRLVDL-----------GDGYYKLVARHSGKALDVENA 139 (165)
T ss_dssp ECCCCCGGGCEEEEEC-----------SSSCEEEEETTTCCEEEEGGG
T ss_pred EcCCCCCccEEEEEEC-----------CCCEEEEEECCCCcEEEcCCC
Confidence 0000123455555532 278899999999999976544
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=65.04 E-value=8.5 Score=42.76 Aligned_cols=37 Identities=5% Similarity=-0.050 Sum_probs=31.4
Q ss_pred cEEEEEeeccEEEEeeCCCeEEeeeccccceeeEeec
Q 011970 90 KVIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNV 126 (474)
Q Consensus 90 ~V~~i~~s~~~las~s~dgtiklW~~~tg~~l~~l~g 126 (474)
.|..+.+....|++++.|.++|+||+.||+++.+..-
T Consensus 223 ~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555566678999999999999999999999998775
No 351
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=64.98 E-value=92 Score=29.16 Aligned_cols=217 Identities=6% Similarity=-0.034 Sum_probs=102.1
Q ss_pred CeEEeeeccccceee-EeecCCCceEEEEEEeeCCCEEEEEEeecCCC-ccceeeeEEEEeEeccCCCCCccceeeeccc
Q 011970 108 GVCAAFSRETNRRIC-FLNVSPDEVIRSLFYNKNNDSLITVSVYASDN-FSSLKCRSTKIEYIRRGKPDSGFALFESESL 185 (474)
Q Consensus 108 gtiklW~~~tg~~l~-~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d-~s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~ 185 (474)
..+-.||..+++-.. .+.. +......-+...+++.++.++.....+ ...-....+..+|+.+++...--++ .....
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL-PSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEEEECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB-SSCEE
T ss_pred CceEEECCCCCeEecCCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC-Ccchh
Confidence 568889988877432 2221 112223333345788777766421111 1111123355667666654110011 11111
Q ss_pred cCceEEEEeCCCCeEEEEecCC--------CcEEEeecCCCeEE--EEEcCCc-EEEEEEcCCceEEEEecCCC---Ccc
Q 011970 186 KWPGFVEFDDVNGKVLTYSAQD--------SIYKVFDLKNYTML--YSISDKH-VQEIKISPGIMLLIFNRSSS---HVP 251 (474)
Q Consensus 186 ~~~~~V~Fs~~nGk~LaS~s~D--------~tiKlWdl~tg~~l--~tl~~~~-V~~vafSpg~~la~~s~~s~---D~t 251 (474)
.+ .++. .++++++.|+.+ ..+-++|+.+.+-. ..++... -.+++...+.+++.++.... -..
T Consensus 91 ~~--~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 166 (315)
T 4asc_A 91 LF--GLGE--ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNK 166 (315)
T ss_dssp SC--EEEE--ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCC
T ss_pred ce--eEEE--ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccce
Confidence 11 2333 268899988843 45788888877522 1222111 11222234554444432111 135
Q ss_pred EEEEecCCCeEEEEEeecCcce-eEEEEEecCCCeEEEEeCCC-----cEEEEECCCCceEEeccccCCceEEEEEcCCC
Q 011970 252 LKILSIEDGTVLKVFYHLLHRN-KKVDFIEQFNEKLLVKQENE-----NLQILDVRNAELMEVSRTEFMTPSAFIFLYEN 325 (474)
Q Consensus 252 IkLWdi~tG~~L~tl~~h~~~v-~~V~F~~~~~~~ll~~~~D~-----tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg 325 (474)
+.++|+++.+-...-.-...+. ..+.. .++..++.|+.++ .+.++|+.+.+-.+...-........+...++
T Consensus 167 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 244 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVG 244 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred EEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECC
Confidence 8899998875432111111111 12222 2344444566443 57899999987665522111111111223377
Q ss_pred cEEEEEc
Q 011970 326 QLFLTFR 332 (474)
Q Consensus 326 ~llaS~s 332 (474)
++++.|+
T Consensus 245 ~l~v~GG 251 (315)
T 4asc_A 245 TLYAIGG 251 (315)
T ss_dssp EEEEEEE
T ss_pred EEEEECC
Confidence 8888776
No 352
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=64.86 E-value=92 Score=29.14 Aligned_cols=189 Identities=11% Similarity=0.036 Sum_probs=92.4
Q ss_pred EEEEecCCCcEEEeecCCCeE-EEEEcC---CcEEEEEEcCCceEEEEec----CCCC----ccEEEEecCCCeEEEEEe
Q 011970 200 VLTYSAQDSIYKVFDLKNYTM-LYSISD---KHVQEIKISPGIMLLIFNR----SSSH----VPLKILSIEDGTVLKVFY 267 (474)
Q Consensus 200 ~LaS~s~D~tiKlWdl~tg~~-l~tl~~---~~V~~vafSpg~~la~~s~----~s~D----~tIkLWdi~tG~~L~tl~ 267 (474)
+++.|+ ..+-.+|..+.+- +..++. ..-.+++...+.+++.++. .... ..+..+|+++++-.. +.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CC
Confidence 444555 4577888887773 223321 1223333335555555542 1111 127788998876532 22
Q ss_pred ec-Ccce-eEEEEEecCCCeEE-EEeCC--------CcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-C--
Q 011970 268 HL-LHRN-KKVDFIEQFNEKLL-VKQEN--------ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N-- 333 (474)
Q Consensus 268 ~h-~~~v-~~V~F~~~~~~~ll-~~~~D--------~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D-- 333 (474)
.. ..+. .++... +++|. .|+.+ ..+.++|..+.+-.+...-....-...+...++++++-|+ +
T Consensus 84 ~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTT
T ss_pred CCCcchhceeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCC
Confidence 11 1111 122222 34444 45532 5688999999876544211111111112236778888775 2
Q ss_pred ----CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEE
Q 011970 334 ----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 404 (474)
Q Consensus 334 ----~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl 404 (474)
..+.++|.....-..+..-... ...-..+ .-++++++.|+..+. +.-..+.++|+.+++-.
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~--~~~~~iyv~GG~~~~------~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTA--RSLFGAT--VHDGRIIVAAGVTDT------GLTSSAEVYSITDNKWA 225 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSC--CBSCEEE--EETTEEEEEEEECSS------SEEEEEEEEETTTTEEE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCc--hhceEEE--EECCEEEEEeccCCC------CccceEEEEECCCCeEE
Confidence 3688888854333333321111 1111122 237888888775110 01235788888776543
No 353
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=63.09 E-value=1.1e+02 Score=29.57 Aligned_cols=245 Identities=13% Similarity=0.144 Sum_probs=0.0
Q ss_pred ccEEEEeeCCCeEEeeeccc-------cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEecc
Q 011970 98 RDIVFALAHSGVCAAFSRET-------NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 170 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~t-------g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~ 170 (474)
.++++..+++|.||-=.+.+ |+-+..++--.++.+..++.....+.|+..+..| ++..+++.+++.
T Consensus 3 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G-------~~~~~~~~elp~ 75 (307)
T 1zi0_A 3 EDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRG-------RVYSMKVYQLPE 75 (307)
T ss_dssp CEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTS-------EEEEEEGGGSCC
T ss_pred CcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCC-------EEEEEEhhHCcC
Q ss_pred CCC-------CCccceeeeccccCceEE-EEeCCCCeEEEEecCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEE
Q 011970 171 GKP-------DSGFALFESESLKWPGFV-EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLI 242 (474)
Q Consensus 171 G~~-------~~~~~lf~~~~~~~~~~V-~Fs~~nGk~LaS~s~D~tiKlWdl~tg~~l~tl~~~~V~~vafSpg~~la~ 242 (474)
+.. ...++|-..+.+.....+ +|. ++++|+..+.+|.+|--.+..+..... ..+..+.+.++..|+.
T Consensus 76 ~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~--~~~~ll~~T~~G~~Krt~l~e~~~~~r---~G~~~i~l~~~d~lv~ 150 (307)
T 1zi0_A 76 ATRGARGRPIVNLLPLEQDERITAILPVTEFE--EGVKVFMATANGTVKKTVLTEFNRLRT---AGKVAIKLVDGDELIG 150 (307)
T ss_dssp CCSSSCCEEGGGTSCCCTTCCEEEEEEESCCC--TTCEEEEEETTSEEEEEEGGGGTTCCT---TCEESSCCCTTCCEEE
T ss_pred CCCCCCCeEhhhccCCCCCCEEEEEEEeccCC--CCcEEEEEeCCCeEEEEEHHHhhcccc---CCeEEEEECCCCEEEE
Q ss_pred EecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECCCCceEEeccccCCceEEEEEc
Q 011970 243 FNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFL 322 (474)
Q Consensus 243 ~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fs 322 (474)
......+..|-+.. ..|++++.-. .+.=..+-...-+++-++..++ .|.++...
T Consensus 151 ~~~~~~~~~i~l~T-~~G~~irf~~---------------~~v~~~gr~a~Gv~~i~L~~~d----------~Vv~~~~~ 204 (307)
T 1zi0_A 151 VDLTSGEDEVMLFS-AEGKVVRFKE---------------SSVRAMGCNTTGVRGIRLGEGD----------KVVSLIVP 204 (307)
T ss_dssp EEEECTTCEEEEEE-TTSEEEEEEG---------------GGSCBCCTTCCCEECCCCCTTC----------CEEEEECC
T ss_pred EEEeCCCCEEEEEC-CCCcEEEEEH---------------HHcCccCCCCCCeEeEEeCCCC----------EEEEEEEe
Q ss_pred CCCcEEEEEc-CCcEEEEeC---------C-CcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCC
Q 011970 323 YENQLFLTFR-NRTVAVWNF---------R-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG 391 (474)
Q Consensus 323 pdg~llaS~s-D~tIklWd~---------~-G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~Dg 391 (474)
+++..++..+ .|.+|-.++ . |.....+..-.+.+ |......++.++++..+. ..
T Consensus 205 ~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~l----v~~~~v~~~~~l~~~t~~-----------g~ 269 (307)
T 1zi0_A 205 RGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLV----VGAVQVDDCDQIMMITDA-----------GT 269 (307)
T ss_dssp CSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSE----EEEEEECTTCEEEEEESS-----------CC
T ss_pred cCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeE----EEEEEeCCCceEEEEcCC-----------Cc
Q ss_pred eEEE
Q 011970 392 SINV 395 (474)
Q Consensus 392 tIkl 395 (474)
.|++
T Consensus 270 ~ir~ 273 (307)
T 1zi0_A 270 LVRT 273 (307)
T ss_dssp EEEE
T ss_pred EEEE
No 354
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=62.65 E-value=1.7e+02 Score=31.51 Aligned_cols=203 Identities=12% Similarity=0.048 Sum_probs=103.6
Q ss_pred CCCeEEEEecCC----CcEEEeecCCCeEE--E-E-----EcC--CcEEEEEEc-CCceEEEEecCCCC---ccEEEEec
Q 011970 196 VNGKVLTYSAQD----SIYKVFDLKNYTML--Y-S-----ISD--KHVQEIKIS-PGIMLLIFNRSSSH---VPLKILSI 257 (474)
Q Consensus 196 ~nGk~LaS~s~D----~tiKlWdl~tg~~l--~-t-----l~~--~~V~~vafS-pg~~la~~s~~s~D---~tIkLWdi 257 (474)
.++++++.|+.+ ..+-++|+.+++-. . . +.. ..-..+.++ .|.+++.++..+.. ..+.++|+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 468888888854 35778888877632 2 2 111 122334454 45555544332211 35788998
Q ss_pred CCCeEEEEEeecCcce-eEEEEEecCCCeEEEEeCCC--cEEEEECCCCceEEecc-----ccCCceEEEEEcCC-CcEE
Q 011970 258 EDGTVLKVFYHLLHRN-KKVDFIEQFNEKLLVKQENE--NLQILDVRNAELMEVSR-----TEFMTPSAFIFLYE-NQLF 328 (474)
Q Consensus 258 ~tG~~L~tl~~h~~~v-~~V~F~~~~~~~ll~~~~D~--tIkIWDv~tg~~~~~l~-----~h~~~v~sv~Fspd-g~ll 328 (474)
.+.+-...-.-...+. .+.... .++..++.|+.++ .+.+||..+.+-..... ..-....++++..+ ++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~-~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSL-PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEEC-TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEE-cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 8865433211011111 122211 2345555566433 79999999987655421 11112234555655 7888
Q ss_pred EEEc-C-------CcEEEEeCC-CcE-----EEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEE
Q 011970 329 LTFR-N-------RTVAVWNFR-GEL-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSIN 394 (474)
Q Consensus 329 aS~s-D-------~tIklWd~~-G~l-----l~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIk 394 (474)
+.|+ + ..+.+||+. .+- ...+.... ..+... -+++...|+++++.|+.+.... ...-..|.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p-~~~R~~-~~~~~~~~~~iyv~GG~~~~~~---~~~~~~v~ 629 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP-LFQRYG-SQIKYITPRKLLIVGGTSPSGL---FDRTNSII 629 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECG-GGCCBS-CEEEEEETTEEEEECCBCSSCC---CCTTTSEE
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCC-CCCccc-ceEEEeCCCEEEEECCccCCCC---CCCCCeEE
Confidence 8875 2 357888985 441 23332211 001011 1333344488888876421100 01245689
Q ss_pred EEeCCCCeEE
Q 011970 395 VSSILTGKCL 404 (474)
Q Consensus 395 lWdi~tG~cl 404 (474)
++|+.+++-.
T Consensus 630 ~yd~~t~~W~ 639 (695)
T 2zwa_A 630 SLDPLSETLT 639 (695)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCeEE
Confidence 9999887654
No 355
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=55.26 E-value=42 Score=36.23 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=45.6
Q ss_pred CCceEEEEEcCCCcEEEEEc-C------------CcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEec
Q 011970 313 FMTPSAFIFLYENQLFLTFR-N------------RTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (474)
Q Consensus 313 ~~~v~sv~Fspdg~llaS~s-D------------~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~ 378 (474)
+..+--++|+|+|.|++.-. + ..+-+-+. +|++.+-+.++.. |-+..++|||||++|...-.
T Consensus 475 f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g----aE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG----CEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT----CEEEEEEECTTSSEEEEEEE
T ss_pred ccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC----ccCcCeeECCCCCEEEEEEE
Confidence 44678899999999988753 2 12333344 3888888887754 56899999999999987644
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.86 E-value=7.8 Score=44.81 Aligned_cols=29 Identities=10% Similarity=0.122 Sum_probs=26.2
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeec
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNV 126 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g 126 (474)
..+|++.+.|+++|+||+.+|+|+.+..-
T Consensus 249 ~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 249 YNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp TTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred ccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 67899999999999999999999998653
No 357
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=52.63 E-value=1.1e+02 Score=28.60 Aligned_cols=85 Identities=13% Similarity=0.165 Sum_probs=53.6
Q ss_pred cEEEeecCCCeEE--EEEc------CCcEEEEEEc-CCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEE
Q 011970 209 IYKVFDLKNYTML--YSIS------DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFI 279 (474)
Q Consensus 209 tiKlWdl~tg~~l--~tl~------~~~V~~vafS-pg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~ 279 (474)
.+.||.+.-|.=+ |++- +..+|.+.+. | +++|++=+..+|+||..... .+ +...
T Consensus 70 ~lt~Wa~~~~nw~wgY~~~ds~~FG~~r~W~i~~~~p------------~G~VqFvN~~TgtCL~ay~n---Gv--v~~~ 132 (206)
T 1sr4_A 70 LLTVWALAKRNWLWAYPNIYSQDFGNIRNWKMEPGKH------------REYFRFVNQSLGTCVEAYGN---GL--IHDI 132 (206)
T ss_dssp EEEECSCSTTCBEEEEEGGGCGGGGGGGCEEEEECSS------------TTCEEEEETTTCCEEEEETT---EE--EEEC
T ss_pred EEEEEecCCCcceeeecccccCCcCCcceeEEEeecC------------CCEEEEEECCCCceeeeccC---Ce--EEec
Confidence 3469999877744 4443 2467777654 3 35788888899999988641 12 2222
Q ss_pred ecCC----CeEEEEeCCCcEEEEECCCCceEEecc
Q 011970 280 EQFN----EKLLVKQENENLQILDVRNAELMEVSR 310 (474)
Q Consensus 280 ~~~~----~~ll~~~~D~tIkIWDv~tg~~~~~l~ 310 (474)
...+ ..-+.-..++.++|=++.+++|+.+..
T Consensus 133 C~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~~ 167 (206)
T 1sr4_A 133 CSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNP 167 (206)
T ss_dssp CCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECS
T ss_pred CCCCCcccEEEEecCCCccEEEEECCCCccCCccC
Confidence 2111 112223467889999999999998743
No 358
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=52.52 E-value=1.9e+02 Score=28.95 Aligned_cols=113 Identities=15% Similarity=0.248 Sum_probs=64.6
Q ss_pred ccEEEEeeCCCeEEeeeccc-------cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEecc
Q 011970 98 RDIVFALAHSGVCAAFSRET-------NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 170 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~t-------g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~ 170 (474)
.++++..+++|.||-=.+.+ |+-+..++-..++.+..++.....+.|+..+..| ++-..++++|+.
T Consensus 7 e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G-------~~~~~~~~eip~ 79 (370)
T 3l6v_A 7 EDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSG-------KVFWLPVHQLPE 79 (370)
T ss_dssp CCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTS-------EEEEEEGGGSCB
T ss_pred CCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCC-------eEEEEEHHHCcC
Confidence 68999999999999743221 2333344433456677777766777666554322 334555567754
Q ss_pred CCC-CCccc------eeeeccccCceEEEEeC-CCCeEEEEecCCCcEEEeecCCCe
Q 011970 171 GKP-DSGFA------LFESESLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYT 219 (474)
Q Consensus 171 G~~-~~~~~------lf~~~~~~~~~~V~Fs~-~nGk~LaS~s~D~tiKlWdl~tg~ 219 (474)
+.. ..+.+ |-..+.+.. .+.+.+ .++++|+.++..|.+|--.+..+.
T Consensus 80 ~~r~a~G~~i~~ll~L~~~e~Iv~--~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~ 134 (370)
T 3l6v_A 80 AGSNARGRPIINWIPLESGERVQA--VLPVREYADNRYVFMATRNGTVKKTPLSEFA 134 (370)
T ss_dssp CCTTSCCEEGGGSCCCCTTCCEEE--EEEESCCCTTCEEEEEETTSEEEEEEGGGGC
T ss_pred CCcccCCcCHhhccCCCCCCEEEE--EEEeccCCCCcEEEEEeCCCeEEEeEHHHhh
Confidence 432 22322 111222332 222221 145688889999999999876443
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=52.17 E-value=53 Score=35.61 Aligned_cols=63 Identities=16% Similarity=0.248 Sum_probs=44.5
Q ss_pred cCCceEEEEEcCCCcEEEEEc-C------------CcEEEEeC-CCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEe
Q 011970 312 EFMTPSAFIFLYENQLFLTFR-N------------RTVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 377 (474)
Q Consensus 312 h~~~v~sv~Fspdg~llaS~s-D------------~tIklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s 377 (474)
.+..+..++|.++|.|..+.. . ..|-..+. +|++..-+.+... |.++.++||||+++|...-
T Consensus 474 ~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~----aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG----CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT----CEEEEEEECTTSSEEEEEE
T ss_pred ccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC----ccccCCEECCCCCEEEEEE
Confidence 356788999999999988321 1 13445555 4887766655433 3479999999999998765
Q ss_pred c
Q 011970 378 K 378 (474)
Q Consensus 378 ~ 378 (474)
.
T Consensus 550 Q 550 (592)
T 4a9v_A 550 Q 550 (592)
T ss_dssp E
T ss_pred e
Confidence 4
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=52.16 E-value=2e+02 Score=29.09 Aligned_cols=59 Identities=8% Similarity=0.050 Sum_probs=39.5
Q ss_pred EEEEecCCC--eEEEEEeec------CcceeEEEEE--ecC----CCeEEEE-eCCCcEEEEECCCCceEEecc
Q 011970 252 LKILSIEDG--TVLKVFYHL------LHRNKKVDFI--EQF----NEKLLVK-QENENLQILDVRNAELMEVSR 310 (474)
Q Consensus 252 IkLWdi~tG--~~L~tl~~h------~~~v~~V~F~--~~~----~~~ll~~-~~D~tIkIWDv~tg~~~~~l~ 310 (474)
|-+||+.|+ ++++++.-. ......+.+- .+. ++..-++ ..+.-|-++|+.+++--+++.
T Consensus 125 Lv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 125 IVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp EEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc
Confidence 667899999 999988631 1234555554 121 2333334 467899999999999888864
No 361
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=51.05 E-value=2.8e+02 Score=30.31 Aligned_cols=249 Identities=10% Similarity=0.031 Sum_probs=128.0
Q ss_pred eEEEEE-EeeCCCEE-EEEEeecCCCccceeeeEEEEeEeccCCCCCccceeee-ccc---cCc--eEEEEeCCCCeEEE
Q 011970 131 VIRSLF-YNKNNDSL-ITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES-ESL---KWP--GFVEFDDVNGKVLT 202 (474)
Q Consensus 131 ~i~sv~-fspdg~~L-is~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~lf~~-~~~---~~~--~~V~Fs~~nGk~La 202 (474)
+...+. ++|||+.+ ++.|.-|+|- ..+++.|+.+|++... .|.. ... .++ ..+++-+ +..++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~------~~~~~~d~~t~~~~~~--~~~~~~k~~~~~~~~~~~~~W~d-~~~~~~ 200 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDE------MFFREWDLEKKDFVKN--GFEPITNSGKLLEGKFTYPTWIN-KDTIIF 200 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSE------EEEEEEETTTTEECTT--CSCCBCTTCCBCCEETCCEEEEE-TTEEEE
T ss_pred EEeceeecCCCCCEEEEEeCCCCCce------eEEEEEECCcCCcCCC--CcccccccccccccccceeeEEC-CCEEEE
Confidence 344555 89999864 5566667676 8899999999987432 1221 000 000 1124432 222333
Q ss_pred E----------ecCCCcEEEeecCCC----eEEEEEcCCcE-EEEEEcC-Cc----eEEEEecCCC-CccEEEEecCC--
Q 011970 203 Y----------SAQDSIYKVFDLKNY----TMLYSISDKHV-QEIKISP-GI----MLLIFNRSSS-HVPLKILSIED-- 259 (474)
Q Consensus 203 S----------~s~D~tiKlWdl~tg----~~l~tl~~~~V-~~vafSp-g~----~la~~s~~s~-D~tIkLWdi~t-- 259 (474)
+ +..-.+|+.|.+-|. .+++.-....+ .++..++ ++ .++++...+. ...+.+.+..+
T Consensus 201 ~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 280 (711)
T 4hvt_A 201 NLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKN 280 (711)
T ss_dssp CCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSS
T ss_pred EeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCC
Confidence 2 223467999987553 35666554332 2344453 33 2344322122 23456666543
Q ss_pred CeEEEEEeecCcceeEEEEEecCCCeEEEE--e---------CCCcEEEEECCCCc--------eEEeccc-cCCceEEE
Q 011970 260 GTVLKVFYHLLHRNKKVDFIEQFNEKLLVK--Q---------ENENLQILDVRNAE--------LMEVSRT-EFMTPSAF 319 (474)
Q Consensus 260 G~~L~tl~~h~~~v~~V~F~~~~~~~ll~~--~---------~D~tIkIWDv~tg~--------~~~~l~~-h~~~v~sv 319 (474)
|+.. .+.- ..-..+... .++++++. + -.+.|-..|+.++. ...++.. ....+..+
T Consensus 281 ~~~~-~l~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (711)
T 4hvt_A 281 LKLQ-KINM--PSDATLQGS--FKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFI 355 (711)
T ss_dssp CEEE-ECCS--CTTCEEEEE--ETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEE
T ss_pred Ccce-Eeec--CCcceEeee--ECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEE
Confidence 6533 3321 111222212 25666662 1 25668888887742 2222333 33466778
Q ss_pred EEcCCCcEEEEEc-CC--cEEEEeCC-Cc-EEEE-eccCCCCcCCCCeeEEEECCCCC-EEEEEecCCCccccccCCCCe
Q 011970 320 IFLYENQLFLTFR-NR--TVAVWNFR-GE-LVTS-FEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSAGS 392 (474)
Q Consensus 320 ~Fspdg~llaS~s-D~--tIklWd~~-G~-ll~t-l~gH~~~~~~~~v~svafSpDg~-~LaS~s~~~~~~~~~~s~Dgt 392 (474)
.+..+ .++++.. |+ .+.++|+. |+ .++. +.-... ..+..+.+++++. ++++++. ...-.+
T Consensus 356 ~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~----~~~~~~~~~~~~~~~~~~~ss--------~~~P~~ 422 (711)
T 4hvt_A 356 STTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQ----NAIFGMSSYEEEEEALITIEN--------SIVPPT 422 (711)
T ss_dssp EECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCST----TCEEEEECCTTCSCEEEEEEC--------SSSCCE
T ss_pred EEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCC----eEEEEEeecCcCCEEEEEEec--------CCCCCE
Confidence 88876 5777776 76 46777774 64 2233 211100 1245566778775 5555543 223577
Q ss_pred EEEEeCCCCeEEEEec
Q 011970 393 INVSSILTGKCLAKIN 408 (474)
Q Consensus 393 IklWdi~tG~cl~tl~ 408 (474)
+-..|+. |+ +..|.
T Consensus 423 ~~~~d~~-~~-~~~l~ 436 (711)
T 4hvt_A 423 IYLWVKT-HE-LKIIR 436 (711)
T ss_dssp EEEECTT-SC-EEEEE
T ss_pred EEEEeCC-Cc-EEEEe
Confidence 8888876 54 33444
No 362
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=47.20 E-value=1.8e+02 Score=27.08 Aligned_cols=191 Identities=10% Similarity=0.023 Sum_probs=91.3
Q ss_pred eEEEEecCCCcEEEeecCCCeEEE-EEc---CCcEEEEEEcCCceEEEEecC-CCC-------ccEEEEecCCCeEEEEE
Q 011970 199 KVLTYSAQDSIYKVFDLKNYTMLY-SIS---DKHVQEIKISPGIMLLIFNRS-SSH-------VPLKILSIEDGTVLKVF 266 (474)
Q Consensus 199 k~LaS~s~D~tiKlWdl~tg~~l~-tl~---~~~V~~vafSpg~~la~~s~~-s~D-------~tIkLWdi~tG~~L~tl 266 (474)
.+++.|+. .+..+|..+.+-.. .+. ...-.+++...+.+++.++.. ..+ ..+..+|..+++-...-
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 45555553 37788888877432 222 112233443345555554311 011 12777898887654321
Q ss_pred eecCcce-eEEEEEecCCCeEEEEeCC-------CcEEEEECCCCceEEeccccCCceEEEEEcCCCcEEEEEc-C----
Q 011970 267 YHLLHRN-KKVDFIEQFNEKLLVKQEN-------ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N---- 333 (474)
Q Consensus 267 ~~h~~~v-~~V~F~~~~~~~ll~~~~D-------~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~llaS~s-D---- 333 (474)
.-...+. ..+.. .++..++.|+.+ ..+.++|..+.+-.+...-....-...+...++++++-|+ +
T Consensus 95 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 95 PLPSARCLFGLGE--VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKK 172 (318)
T ss_dssp CBSSCBCSCEEEE--ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSC
T ss_pred CCCccccccceEE--ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCC
Confidence 1111111 22222 234444556643 3577899998876554211000000111226888888775 2
Q ss_pred --CcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeE
Q 011970 334 --RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 403 (474)
Q Consensus 334 --~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~c 403 (474)
..+.++|...+.-..+..-.. +...-..+. -++++++.|+..+. +.-..+.++|+.+++-
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~--~~~~iyv~GG~~~~------~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKT--PRSMFGVAI--HKGKIVIAGGVTED------GLSASVEAFDLKTNKW 234 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSS--CCBSCEEEE--ETTEEEEEEEEETT------EEEEEEEEEETTTCCE
T ss_pred ccceEEEEcCCCCEEEECCCCCC--CcccceEEE--ECCEEEEEcCcCCC------CccceEEEEECCCCeE
Confidence 258888885333333322111 111111222 37788887765110 0024577888877654
No 363
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=46.75 E-value=1.8e+02 Score=27.03 Aligned_cols=214 Identities=10% Similarity=0.022 Sum_probs=95.2
Q ss_pred EEeeeccccceee-EeecCCCceEEEEEEeeCCCEEEEEEeec-CCCc-cceeeeEEEEeEeccCCCCCccceeeecccc
Q 011970 110 CAAFSRETNRRIC-FLNVSPDEVIRSLFYNKNNDSLITVSVYA-SDNF-SSLKCRSTKIEYIRRGKPDSGFALFESESLK 186 (474)
Q Consensus 110 iklW~~~tg~~l~-~l~g~~~~~i~sv~fspdg~~Lis~S~~~-s~d~-s~Lk~~~~~iw~i~~G~~~~~~~lf~~~~~~ 186 (474)
+..||..+++-.. .+.. +...-..-+...+++.++.++... .+.. ..+. ..+..+|+.+++...- +-.......
T Consensus 26 ~~~yd~~~~~W~~~~~~~-~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~-~~~~~~d~~~~~W~~~-~~~p~~r~~ 102 (318)
T 2woz_A 26 AVAYDPMENECYLTALAE-QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQ-SYFFQLDNVSSEWVGL-PPLPSARCL 102 (318)
T ss_dssp EEEEETTTTEEEEEEECT-TSCSSEEEEECSSSCEEEEESSCC-------CCC-BEEEEEETTTTEEEEC-SCBSSCBCS
T ss_pred eEEECCCCCceecccCCc-cCCccceEEEEECCEEEEECCcccCccccCCCcc-ccEEEEeCCCCcEEEC-CCCCccccc
Confidence 7889988877433 2221 111122233346777766654210 0110 0111 1244556655553110 001111111
Q ss_pred CceEEEEeCCCCeEEEEecCC-------CcEEEeecCCCeEEE--EEcCCcE-EEEEEcCCceEEEEecCCC---CccEE
Q 011970 187 WPGFVEFDDVNGKVLTYSAQD-------SIYKVFDLKNYTMLY--SISDKHV-QEIKISPGIMLLIFNRSSS---HVPLK 253 (474)
Q Consensus 187 ~~~~V~Fs~~nGk~LaS~s~D-------~tiKlWdl~tg~~l~--tl~~~~V-~~vafSpg~~la~~s~~s~---D~tIk 253 (474)
+ .++. .++++.+.|+.+ ..+-++|+.+.+-.. .++...- .+++...+.+++.++.... -..+.
T Consensus 103 ~--~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 178 (318)
T 2woz_A 103 F--GLGE--VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVF 178 (318)
T ss_dssp C--EEEE--ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEE
T ss_pred c--ceEE--ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEE
Confidence 1 2333 268898888864 246777887766322 2221110 1222234444444322111 23588
Q ss_pred EEecCCCeEEEEEeecCcce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCceEEeccccCCceEEEEEcCCCcE
Q 011970 254 ILSIEDGTVLKVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQL 327 (474)
Q Consensus 254 LWdi~tG~~L~tl~~h~~~v-~~V~F~~~~~~~ll~~~~D-----~tIkIWDv~tg~~~~~l~~h~~~v~sv~Fspdg~l 327 (474)
++|+++.+-...-.-...+. ..+... ++..++.|+.+ ..+.++|+.+.+-.+...-........+...++++
T Consensus 179 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 256 (318)
T 2woz_A 179 IYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSL 256 (318)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEE
T ss_pred EEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEE
Confidence 99998876433211111111 122222 24444446532 35678999988765542111111111122346788
Q ss_pred EEEEc
Q 011970 328 FLTFR 332 (474)
Q Consensus 328 laS~s 332 (474)
++-|+
T Consensus 257 ~v~GG 261 (318)
T 2woz_A 257 YAIGG 261 (318)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 88775
No 364
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=44.92 E-value=1.3e+02 Score=31.31 Aligned_cols=107 Identities=10% Similarity=0.051 Sum_probs=63.9
Q ss_pred eCCCcEEEEECCCCceEEeccccCC-ceEEEEEcC----CCcEEEEEc-CCcEEEEeCC-CcEEEEeccCCCCcCCCCe-
Q 011970 290 QENENLQILDVRNAELMEVSRTEFM-TPSAFIFLY----ENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNT- 361 (474)
Q Consensus 290 ~~D~tIkIWDv~tg~~~~~l~~h~~-~v~sv~Fsp----dg~llaS~s-D~tIklWd~~-G~ll~tl~gH~~~~~~~~v- 361 (474)
..+++.+|-+..+|+|+.+..+... ...-..+.. +.+..+... ++..+|-+.. |+||..-.+...- +..|
T Consensus 358 ~~~~~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~--G~~v~ 435 (526)
T 3vsf_A 358 PDTTRYKLVNKNSGKVLDVLDGSVDNAAQIVQWTDNGSLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKED--GGVLI 435 (526)
T ss_dssp SCCCCEEEEETTTCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCST--TEEEE
T ss_pred CCCccEEEEECCCCceEEecCCCCCCCcEEEEccCCCCcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCC--CCEEE
Confidence 3578899999999999998654221 222223332 223444444 8888888884 8898754332210 0000
Q ss_pred -eEEEECCCCCEEEEEecCCCccccccCCCCeEEEEeCCCCeEEEEecC
Q 011970 362 -NNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 409 (474)
Q Consensus 362 -~svafSpDg~~LaS~s~~~~~~~~~~s~DgtIklWdi~tG~cl~tl~g 409 (474)
+...=++++++.+.... +|..+|-+..+|+||..-.+
T Consensus 436 ~~~c~g~~nQ~W~~~~~g-----------~g~y~i~~~~sg~cLdv~~~ 473 (526)
T 3vsf_A 436 QYTSNGGYNQHWKFTDIG-----------DGYYKISSRHCGKLIDVRKW 473 (526)
T ss_dssp EECCCCCGGGCEEEEEEE-----------TTEEEEEESSSCCEEEEGGG
T ss_pred EecCCCCcccEEEEEECC-----------CCeEEEEECCCCCEEEeCCC
Confidence 11111245666665433 79999999999999976443
No 365
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=40.06 E-value=4.4e+02 Score=31.99 Aligned_cols=139 Identities=11% Similarity=0.118 Sum_probs=84.7
Q ss_pred CCcEEEeecCCCeEE--EEEcCCcEEEEEEcCCceEEEEecCCCCccEEEEecCCCeEEEEEeecCcceeEEEEEecCCC
Q 011970 207 DSIYKVFDLKNYTML--YSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNE 284 (474)
Q Consensus 207 D~tiKlWdl~tg~~l--~tl~~~~V~~vafSpg~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~~~v~~V~F~~~~~~ 284 (474)
..+|-|=|++++.-. +.+.. -+...+|...+++.- + ..++.|+|+++-+.++++.-... |.|----+.
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~A---dsAIMnP~~~iiALr-a--g~~lQiFnl~~k~klks~~~~e~----VvfWkWis~ 116 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISA---DSAIMNPASKVIALK-A--GKTLQIFNIEMKSKMKAHTMTDD----VTFWKWISL 116 (1630)
T ss_pred CceEEEEECCCCCCcccccccc---hhhccCCCcceEEEe-c--CCeEEEeehHHhhhhcccccCCC----ceEEEecCC
Confidence 347778888876633 12222 123456744433331 2 36899999999988988874333 333211122
Q ss_pred eEEEEeCCCcEEEEECCC-CceEEecccc----CCceEEEEEcCCCcEEEE-------Ec-CCcEEEEeCCCcEEEEecc
Q 011970 285 KLLVKQENENLQILDVRN-AELMEVSRTE----FMTPSAFIFLYENQLFLT-------FR-NRTVAVWNFRGELVTSFED 351 (474)
Q Consensus 285 ~ll~~~~D~tIkIWDv~t-g~~~~~l~~h----~~~v~sv~Fspdg~llaS-------~s-D~tIklWd~~G~ll~tl~g 351 (474)
..++=--+..|--|++.. ..+.+.+.-| ...|-...-+++++.++- +. .|.+.|+.++-+.-+.++|
T Consensus 117 ~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ieg 196 (1630)
T 1xi4_A 117 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (1630)
T ss_pred CeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhH
Confidence 333333567889999964 3444444333 234555566777777662 23 6889999998888889999
Q ss_pred CCCC
Q 011970 352 HLLW 355 (474)
Q Consensus 352 H~~~ 355 (474)
|...
T Consensus 197 ha~~ 200 (1630)
T 1xi4_A 197 HAAS 200 (1630)
T ss_pred hHhh
Confidence 9763
No 366
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=39.89 E-value=2.5e+02 Score=26.52 Aligned_cols=37 Identities=11% Similarity=-0.023 Sum_probs=19.3
Q ss_pred cEEEEECCCCceEEe--ccccCCceEEEEEcCCCcEEEEEc
Q 011970 294 NLQILDVRNAELMEV--SRTEFMTPSAFIFLYENQLFLTFR 332 (474)
Q Consensus 294 tIkIWDv~tg~~~~~--l~~h~~~v~sv~Fspdg~llaS~s 332 (474)
.+.++|+.+.+-.++ +...-..- .+...++++++-|+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~--~~~~~~~~i~v~GG 324 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYG--VSLPWNNSLLIIGG 324 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSS--EEEEETTEEEEEEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccc--eeEEeCCEEEEEee
Confidence 578999998775543 22111111 22345788888876
No 367
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=35.64 E-value=3.1e+02 Score=26.48 Aligned_cols=152 Identities=9% Similarity=0.031 Sum_probs=71.4
Q ss_pred EcCCcEEEEEEcC--CceEEEEecCCCCccEEEEecC-CCeEEEEEee--------------cCcceeEEEEEecC-CCe
Q 011970 224 ISDKHVQEIKISP--GIMLLIFNRSSSHVPLKILSIE-DGTVLKVFYH--------------LLHRNKKVDFIEQF-NEK 285 (474)
Q Consensus 224 l~~~~V~~vafSp--g~~la~~s~~s~D~tIkLWdi~-tG~~L~tl~~--------------h~~~v~~V~F~~~~-~~~ 285 (474)
+....|.+|++.| .+.+.++...+ ...-.||-.. .|+--+.+.. ....+..|++.+.+ ++.
T Consensus 52 ~~~~~v~~i~~dp~~~~~l~~g~~~g-~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ 130 (394)
T 3b7f_A 52 FLGHTIHHIVQDPREPERMLMAARTG-HLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGT 130 (394)
T ss_dssp STTSEEEEEEECSSSTTCEEEEEEC---CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTC
T ss_pred CCCCceEEEEECCCCCCeEEEEecCC-CCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCE
Confidence 3356799999996 44444443221 0011233332 2332222211 11256778876544 677
Q ss_pred EEEEeCCCcEEEEECCCCceEEeccc-------------------cCCceEEEEEcC--CCcEEEEEcCCcEEEEeCCCc
Q 011970 286 LLVKQENENLQILDVRNAELMEVSRT-------------------EFMTPSAFIFLY--ENQLFLTFRNRTVAVWNFRGE 344 (474)
Q Consensus 286 ll~~~~D~tIkIWDv~tg~~~~~l~~-------------------h~~~v~sv~Fsp--dg~llaS~sD~tIklWd~~G~ 344 (474)
+.++.+++.|-..+ ..|+--+.... ....+.++++.| .+.+++...++.|-.-+-.|+
T Consensus 131 l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~ 209 (394)
T 3b7f_A 131 WYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGT 209 (394)
T ss_dssp EEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTS
T ss_pred EEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCC
Confidence 88876666555443 22332221110 123567888987 355666555443332222355
Q ss_pred EEEEeccCC--CCcC------CCCeeEEEECCC-CCEEEEEe
Q 011970 345 LVTSFEDHL--LWHP------DCNTNNIYITSD-QDLIISYC 377 (474)
Q Consensus 345 ll~tl~gH~--~~~~------~~~v~svafSpD-g~~LaS~s 377 (474)
--+.+.... .+.+ ...+..|++.|+ ...|..+.
T Consensus 210 tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 210 DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred CceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 333332100 0000 012678999986 24444343
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=32.46 E-value=3.5e+02 Score=26.07 Aligned_cols=234 Identities=14% Similarity=0.111 Sum_probs=0.0
Q ss_pred EEEEEeeccEEEEeeCCCeEEeeecc-------ccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEE
Q 011970 91 VIEIVAARDIVFALAHSGVCAAFSRE-------TNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 163 (474)
Q Consensus 91 V~~i~~s~~~las~s~dgtiklW~~~-------tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~ 163 (474)
+.++....++++..+++|.||--... .|+-+..++-..++.+..++.....+.|+..+..| ++...
T Consensus 1 ~edli~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G-------~~~~~ 73 (312)
T 1suu_A 1 MSDLMQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEG-------KLYLI 73 (312)
T ss_dssp -------CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTS-------EEEEE
T ss_pred CccccCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCC-------eEEEE
Q ss_pred EEeEeccCCCCC-------ccceeeeccccCceEE-EEeCCCCeEEEEecCCCcEEEeec-------CCCeEEEEEc-CC
Q 011970 164 KIEYIRRGKPDS-------GFALFESESLKWPGFV-EFDDVNGKVLTYSAQDSIYKVFDL-------KNYTMLYSIS-DK 227 (474)
Q Consensus 164 ~iw~i~~G~~~~-------~~~lf~~~~~~~~~~V-~Fs~~nGk~LaS~s~D~tiKlWdl-------~tg~~l~tl~-~~ 227 (474)
+..+++.+.... .+++-..+.+.....+ +|+ +.+.|...+..|.+|--.+ ..|.....+. ++
T Consensus 74 ~~~~ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~--~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d 151 (312)
T 1suu_A 74 NAYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLT--DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKD 151 (312)
T ss_dssp EGGGSCC-------CBGGGTSCCCTTCCEEEEEEESCCC--TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTC
T ss_pred EHHHCCCCCccCCCcChhhccCCCCCCEEEEEEEeccCC--CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCC
Q ss_pred cEEEEEEc-CCceEEEEecCCCCccEEEEecCC---------CeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEE
Q 011970 228 HVQEIKIS-PGIMLLIFNRSSSHVPLKILSIED---------GTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQI 297 (474)
Q Consensus 228 ~V~~vafS-pg~~la~~s~~s~D~tIkLWdi~t---------G~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkI 297 (474)
.+-.+... ++..++.. +..+.+....+.+ |..+..|.. ...+-.+... .+++.+++-+++|..+.
T Consensus 152 ~lv~~~~~~~~~~i~l~---T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v-~~~~~l~~vt~~G~~kr 226 (312)
T 1suu_A 152 FVTSAEIVFKDEKVICL---SKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSV-KENPYLLIVSENGYGKR 226 (312)
T ss_dssp CEEEEEEECTTCEEEEE---ETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEEC-TTCSEEEEEETTSEEEE
T ss_pred EEEEEEEeCCCCEEEEE---eCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEE-CCCCeEEEEECCCceEE
Q ss_pred EEC---------CCCceEEecc--ccCCceEEEEEcCCCcEEEEEcCC-cEEE
Q 011970 298 LDV---------RNAELMEVSR--TEFMTPSAFIFLYENQLFLTFRNR-TVAV 338 (474)
Q Consensus 298 WDv---------~tg~~~~~l~--~h~~~v~sv~Fspdg~llaS~sD~-tIkl 338 (474)
.++ ..|..+..+. ....-+....+.++..+++..+.| .+++
T Consensus 227 ~~~~e~~~~~R~~kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~ 279 (312)
T 1suu_A 227 LNMSKISELKRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRT 279 (312)
T ss_dssp EEGGGSCBCCTTCCCEECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEE
T ss_pred EEHHHhcccCCCCCCEEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEE
No 369
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=30.97 E-value=3.7e+02 Score=25.92 Aligned_cols=52 Identities=12% Similarity=-0.042 Sum_probs=27.5
Q ss_pred CCeEEEEeCCCcEEEEECCCCceEEec--cccCCceEEEEEcC--CCcEEEEEcCC
Q 011970 283 NEKLLVKQENENLQILDVRNAELMEVS--RTEFMTPSAFIFLY--ENQLFLTFRNR 334 (474)
Q Consensus 283 ~~~ll~~~~D~tIkIWDv~tg~~~~~l--~~h~~~v~sv~Fsp--dg~llaS~sD~ 334 (474)
.+.|.++...+.+++-+-..|+.-+.. .-....+.++++.| ++.+++.+..+
T Consensus 22 ~g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 22 PVMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp CCEEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CCEEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 356666666653333222222211111 11234689999998 78888876654
No 370
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=30.04 E-value=4e+02 Score=26.01 Aligned_cols=193 Identities=11% Similarity=0.212 Sum_probs=97.2
Q ss_pred ccEEEEeeCCCeEEeeeccc-------cceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEecc
Q 011970 98 RDIVFALAHSGVCAAFSRET-------NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 170 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~t-------g~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~ 170 (474)
.++++..+++|.||-=.+.+ |+-+..+.-..++.+..++.....+.|...+. .. ++..+++++|+.
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~---~G----r~y~~~~~~lp~ 75 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTT---QG----RVYRAKAYDLPE 75 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEET---TS----EEEEEEGGGSCB
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeC---CC----eEEEEEHHHCcC
Confidence 57899999999999654221 12233333223456777777666666665442 22 445666777776
Q ss_pred CCC-CCccc---ee---eeccccCceEEEEeC-CCCeEEEEecCCCcEEEeecCCCeE-------EEEEc-CCcEEEEEE
Q 011970 171 GKP-DSGFA---LF---ESESLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTM-------LYSIS-DKHVQEIKI 234 (474)
Q Consensus 171 G~~-~~~~~---lf---~~~~~~~~~~V~Fs~-~nGk~LaS~s~D~tiKlWdl~tg~~-------l~tl~-~~~V~~vaf 234 (474)
+.. ..+.+ +. ..+.+.. -+.+.+ ++.++++..+.+|.||--.+..+.. ...+. ++.+-.+..
T Consensus 76 ~~r~~~G~~i~~~l~l~~~e~i~~--~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~ 153 (327)
T 3uc1_A 76 ASRTARGQHVANLLAFQPEERIAQ--VIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVL 153 (327)
T ss_dssp CCSSSCCEEHHHHTTCCTTCCEEE--EEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEE
T ss_pred CCccCCCEEHHHccCCCCCCEEEE--EEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEE
Confidence 542 22332 11 1222332 223321 2577899999999999998766442 12233 344554444
Q ss_pred c-CCceEEEEecCCCCccEEEE--ecC------CCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECC
Q 011970 235 S-PGIMLLIFNRSSSHVPLKIL--SIE------DGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR 301 (474)
Q Consensus 235 S-pg~~la~~s~~s~D~tIkLW--di~------tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~ 301 (474)
. ....++.++..+.-..+++. ++. .|..+..|.. ...+-.+... +.++.++...+.|.+|.-.+.
T Consensus 154 ~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~-~d~Vv~~~~~-~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 154 CSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNI-DDRLLSLNVV-REGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp ECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCT-TCCEEEEEEC-CTTCEEEEEETTSEEEEEEGG
T ss_pred ecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCC-CCEEEEEEEE-CCCCEEEEEeCCCcEEEEEHH
Confidence 4 33444444332111112222 222 2222222221 1334444433 234577778888888877653
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=29.70 E-value=4e+02 Score=25.97 Aligned_cols=151 Identities=12% Similarity=0.072 Sum_probs=81.8
Q ss_pred hhcccccceeecccCCCCCcc-c------ccccccccccEEEEEee-----ccEEEEeeCCCeEEeeeccc-------cc
Q 011970 59 RFRNMHLVEEYDTHDPKGHCP-F------VLPFLMKRTKVIEIVAA-----RDIVFALAHSGVCAAFSRET-------NR 119 (474)
Q Consensus 59 ~~~~~~l~~~~~~~~~~~~~~-~------~~~~~~~~~~V~~i~~s-----~~~las~s~dgtiklW~~~t-------g~ 119 (474)
+|+|-|---.+..|+.|.... . -.-.|....+|..+..- ++.++.++.+|.+|--.+.. |.
T Consensus 58 ~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~ 137 (327)
T 3uc1_A 58 FFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGI 137 (327)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCE
T ss_pred EEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCce
Confidence 467777666677777775421 0 01124566778887654 57999999999999876543 33
Q ss_pred eeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEe--Eec-cCCCCCccceeeeccccCceEEEEeCC
Q 011970 120 RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE--YIR-RGKPDSGFALFESESLKWPGFVEFDDV 196 (474)
Q Consensus 120 ~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw--~i~-~G~~~~~~~lf~~~~~~~~~~V~Fs~~ 196 (474)
....|.. . +.+-.++.....+.|+.++. .. ++-..++. +|+ .|+...+.++.....-..+-++..- +
T Consensus 138 ~~i~lke-~-D~lv~~~~~~~~d~ill~T~---~G----~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~-~ 207 (327)
T 3uc1_A 138 VAVNLRD-N-DELVGAVLCSAGDDLLLVSA---NG----QSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVV-R 207 (327)
T ss_dssp ESCBCCT-T-CCEEEEEEECTTCEEEEEET---TS----EEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEEC-C
T ss_pred EEEEECC-C-CEEEEEEEecCCCEEEEEEC---CC----eEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEE-C
Confidence 3333432 3 34555555555566665553 22 11223334 443 3333333333222111122233332 2
Q ss_pred CCeEEEEecCCCcEEEeecCCCe
Q 011970 197 NGKVLTYSAQDSIYKVFDLKNYT 219 (474)
Q Consensus 197 nGk~LaS~s~D~tiKlWdl~tg~ 219 (474)
+++.|+..+..|.+|.-.+..+.
T Consensus 208 ~~~~ll~~T~~G~~Krt~l~e~~ 230 (327)
T 3uc1_A 208 EGTYLLVATSGGYAKRTAIEEYP 230 (327)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSC
T ss_pred CCCEEEEEeCCCcEEEEEHHHcc
Confidence 45577778888888888776543
No 372
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=26.67 E-value=2.5e+02 Score=22.64 Aligned_cols=45 Identities=11% Similarity=0.262 Sum_probs=29.2
Q ss_pred EEEEEcCCCcEEEEEcCCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECCCCCEEE
Q 011970 317 SAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLII 374 (474)
Q Consensus 317 ~sv~Fspdg~llaS~sD~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDg~~La 374 (474)
..+.+..||++++...++.+ ||... ...... -..+.+.+||.+++
T Consensus 53 ~~l~l~~dGNLVl~~~~~~~-~W~S~-------t~~~~g-----~~~l~l~~dGnlvl 97 (110)
T 3a0c_A 53 CRLTLHNNGNLVIYDQSNRV-IWQTK-------TNGKED-----HYVLVLQQDRNVVI 97 (110)
T ss_dssp CEEEECTTSCEEEECTTCCE-EEECC-------CCCSSS-----CCEEEECTTSCEEE
T ss_pred EEEEEeCCCCEEEECCCCcE-EEecC-------CCCCCC-----CEEEEEeCCccEEE
Confidence 35678899999987665554 78842 221111 13577889999766
No 373
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=26.33 E-value=2.3e+02 Score=23.03 Aligned_cols=73 Identities=10% Similarity=-0.035 Sum_probs=40.7
Q ss_pred eCCCcEEEEECCCCceEEecccc-CCceEEEEEcCCCcEEEEEcCCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEECC
Q 011970 290 QENENLQILDVRNAELMEVSRTE-FMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITS 368 (474)
Q Consensus 290 ~~D~tIkIWDv~tg~~~~~l~~h-~~~v~sv~Fspdg~llaS~sD~tIklWd~~G~ll~tl~gH~~~~~~~~v~svafSp 368 (474)
+.||++.|++...+..+-..... ......+.|..+|.+++...++.+ +|...... ... ...+.+-+
T Consensus 31 q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~S~t~~------~~~------~~~~~L~~ 97 (113)
T 3mez_B 31 RDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFVSNTVG------QEG------DYVLILQI 97 (113)
T ss_dssp CTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEECSCCC------SSS------CCEEEECT
T ss_pred cCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEECCCcC------CCC------CEEEEEcC
Confidence 46666666664333333222211 112345778999999987666665 89863211 111 02356788
Q ss_pred CCCEEEE
Q 011970 369 DQDLIIS 375 (474)
Q Consensus 369 Dg~~LaS 375 (474)
||.+.+-
T Consensus 98 dGnlvly 104 (113)
T 3mez_B 98 NGQAVVY 104 (113)
T ss_dssp TSCEEEE
T ss_pred CceEEEe
Confidence 8887773
No 374
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A*
Probab=25.82 E-value=4.7e+02 Score=25.46 Aligned_cols=21 Identities=10% Similarity=0.118 Sum_probs=16.2
Q ss_pred CCeEEEEeCCCCeEEEEecCC
Q 011970 390 AGSINVSSILTGKCLAKINAT 410 (474)
Q Consensus 390 DgtIklWdi~tG~cl~tl~gH 410 (474)
+|..+|-+..+|+||-.-.+.
T Consensus 108 ~G~y~I~n~~SGk~LDV~g~s 128 (293)
T 3ef2_A 108 GTSYKIQNYGSKTFVDLVNGD 128 (293)
T ss_dssp SSSEEEEETTTCCEEEEGGGC
T ss_pred CCEEEEEECCCCcEEEeCCCC
Confidence 578889999999998765443
No 375
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=25.65 E-value=1.4e+02 Score=24.16 Aligned_cols=72 Identities=15% Similarity=0.152 Sum_probs=38.9
Q ss_pred EeCCCcEEEEECCCCceEEecccc--CCceEEEEEcCCCcEEEEEcCCcEEEEeCCCcEEEEeccCCCCcCCCCeeEEEE
Q 011970 289 KQENENLQILDVRNAELMEVSRTE--FMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYI 366 (474)
Q Consensus 289 ~~~D~tIkIWDv~tg~~~~~l~~h--~~~v~sv~Fspdg~llaS~sD~tIklWd~~G~ll~tl~gH~~~~~~~~v~svaf 366 (474)
=+.|+++-||+- +..+-....+ ......+.|..||.+++...++++ ||...-. +... -..+.+
T Consensus 25 ~q~DgNLvly~~--~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~~~~-vWss~t~------~~~~------~~~l~L 89 (105)
T 4h3o_A 25 MQDDCNLVLYDH--STSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRS-LWASHST------RGSG------NYILIL 89 (105)
T ss_dssp ECTTSCEEEEET--TEEEEECCCCCTTCCSCEEEECTTSCEEEECTTCCE-EEECCCC------CCSS------CEEEEE
T ss_pred ECCCCeEEEEEC--CEEEEEecCCCCCCccEEEEEeCCccEEEECCCcEE-EEEecCC------CCCC------CEEEEE
Confidence 346666666652 2222221111 112345778999999887666654 7875210 0011 123567
Q ss_pred CCCCCEEEE
Q 011970 367 TSDQDLIIS 375 (474)
Q Consensus 367 SpDg~~LaS 375 (474)
-+||.+.+-
T Consensus 90 ~ddGNlVly 98 (105)
T 4h3o_A 90 QDDGNVIIY 98 (105)
T ss_dssp CTTSCEEEE
T ss_pred eCCCeEEEE
Confidence 888988874
No 376
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=23.72 E-value=4.4e+02 Score=24.68 Aligned_cols=108 Identities=10% Similarity=0.126 Sum_probs=54.0
Q ss_pred ccEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCcc
Q 011970 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (474)
Q Consensus 98 ~~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~ 177 (474)
.++++..+++|.||-=... +..+..++-..++.+..++.....+.|+..+..| ++..+++.+++.+.. .+.
T Consensus 2 E~v~v~lT~~G~iKr~~~~-~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~G-------r~~~~~~~elp~~r~-~G~ 72 (256)
T 1zvt_A 2 EPVTIVLSQMGWVRSAKGH-DIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTG-------RSYAIDPITLPSARG-QGE 72 (256)
T ss_dssp CEEEEEEETTSEEEEEESS-CCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTS-------EEEEECGGGSCCSSS-CCE
T ss_pred CCEEEEEeCCCEEEEeeCC-cCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCC-------eEEEEEHHHCCCcCC-CCe
Confidence 3567888999999865432 2111122222334455555555555555444222 223444455544421 221
Q ss_pred ------ceeeeccccCceEEEEeCCCCeEEEEecCCCcEEEeecCCC
Q 011970 178 ------ALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY 218 (474)
Q Consensus 178 ------~lf~~~~~~~~~~V~Fs~~nGk~LaS~s~D~tiKlWdl~tg 218 (474)
+|-..+.+. .+ +...+++.|...+..|.+|...+..+
T Consensus 73 ~i~~~i~L~~~e~Iv---~~-~~~~~~~~lll~T~~G~~Kr~~~~e~ 115 (256)
T 1zvt_A 73 PLTGKLTLPPGATVD---HM-LMESDDQKLLMASDAGYGFVCTFNDL 115 (256)
T ss_dssp EGGGTCCCCTTCCEE---EE-ECCCTTCEEEEEBTTSEEEEEEGGGG
T ss_pred EeeeeecCCCCCEEE---EE-EEeCCCCEEEEEeCCCeEEEeEHHHh
Confidence 222222222 33 21124556777888899988887543
No 377
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=23.38 E-value=4.8e+02 Score=24.66 Aligned_cols=176 Identities=14% Similarity=0.123 Sum_probs=87.9
Q ss_pred cEEEEeeCCCeEEeeeccccceeeEeecCCCceEEEEEEeeCCCEEEEEEeecCCCccceeeeEEEEeEeccCCCCCccc
Q 011970 99 DIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFA 178 (474)
Q Consensus 99 ~~las~s~dgtiklW~~~tg~~l~~l~g~~~~~i~sv~fspdg~~Lis~S~~~s~d~s~Lk~~~~~iw~i~~G~~~~~~~ 178 (474)
.+-+.+|++|.+|-- .|-.+ ..+.+..++-....+.|...+. .. ++..+++++++.+.... +
T Consensus 2 ~vtvils~~Gwir~~---~g~~~------~gD~~~~~~~~~t~~~ll~fT~---~G----~v~~~~~~~lp~~~~~~-l- 63 (276)
T 3no0_A 2 SITVAVLQDGSIIPV---EELPL------EKAPVVNILRVPFTEGLFLVSN---RG----RVYWIAGSQALQGSKVS-L- 63 (276)
T ss_dssp EEEEEEETTSEEEEG---GGCCS------SCCCEEEEEEEETTSCEEEEET---TS----EEEEECSHHHHTSEECC-C-
T ss_pred cEEEEEcCCceeeec---cCCCC------CCCeEEEEEEECCCCEEEEEcC---CC----eEEEEEhhhCccCcccc-c-
Confidence 455778999999852 23211 2244666666555555554432 22 44566667776543221 2
Q ss_pred eeeeccccCceEEEEeCC-CCeEEEEecCCCcEEEeecCCCe------EEEEEc-CCcEEEEEEc-CCceEEEEecCCCC
Q 011970 179 LFESESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYT------MLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSH 249 (474)
Q Consensus 179 lf~~~~~~~~~~V~Fs~~-nGk~LaS~s~D~tiKlWdl~tg~------~l~tl~-~~~V~~vafS-pg~~la~~s~~s~D 249 (474)
|-..+.+. .| +.+. +..+++..+.+|-||--.+..+. ....+. ++.+-.+... ....++.++..
T Consensus 64 l~~~e~i~---~v-~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~--- 136 (276)
T 3no0_A 64 KSREEKIV---GA-FIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKK--- 136 (276)
T ss_dssp SSTTCCEE---EE-EEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETT---
T ss_pred CCCCCEEE---EE-ECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECC---
Confidence 21222333 33 2111 45688889999999999887653 222233 3455555444 33344444322
Q ss_pred ccEEEEe---cC------CCeEEEEEeecCcceeEEEEEecCCCeEEEEeCCCcEEEEECC
Q 011970 250 VPLKILS---IE------DGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR 301 (474)
Q Consensus 250 ~tIkLWd---i~------tG~~L~tl~~h~~~v~~V~F~~~~~~~ll~~~~D~tIkIWDv~ 301 (474)
+.+...+ +. .|..+..|.. .+.+-.+... ++++.++...+.|.++...+.
T Consensus 137 G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~-~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 137 GRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIW-NGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp SEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEE-SSCSEEEEEETTSCEEEEEGG
T ss_pred CEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEe-CCCCEEEEEeCCCcEEEeEHH
Confidence 2222222 11 1222222221 1333333333 235577777777777777654
No 378
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.07 E-value=6.1e+02 Score=25.47 Aligned_cols=159 Identities=13% Similarity=0.128 Sum_probs=86.6
Q ss_pred EEEeecCCC--eEEEEEc--------CCcEEEEEEc---C-----CceEEEEecCCCCccEEEEecCCCeEEEEEeecC-
Q 011970 210 YKVFDLKNY--TMLYSIS--------DKHVQEIKIS---P-----GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLL- 270 (474)
Q Consensus 210 iKlWdl~tg--~~l~tl~--------~~~V~~vafS---p-----g~~la~~s~~s~D~tIkLWdi~tG~~L~tl~~h~- 270 (474)
+-+|||+|. ++++++. +..+.+|++. | +++.-++ ++...-|-+.|+++|+--+.+.++.
T Consensus 125 Lv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYIt--D~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 125 IVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYIT--NFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEE--ETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred EEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEE--cCCCCcEEEEECCCCcEEEEccCCCc
Confidence 557888888 8776553 2358888887 3 3444444 3445679999999998877653111
Q ss_pred -----------------cceeEEEEEecC---CCeEEEEeCCCcEEEEECCCC--------ceEEeccccC---CceEEE
Q 011970 271 -----------------HRNKKVDFIEQF---NEKLLVKQENENLQILDVRNA--------ELMEVSRTEF---MTPSAF 319 (474)
Q Consensus 271 -----------------~~v~~V~F~~~~---~~~ll~~~~D~tIkIWDv~tg--------~~~~~l~~h~---~~v~sv 319 (474)
..+..++.++.. +..|--..--+ -+++-+.|. ..++.+ |.. ....+.
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~ 280 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIAL 280 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceE
Confidence 123334433210 11121111000 122222211 111211 111 123345
Q ss_pred EEc-CCCcEEEEEc-CCcEEEEeCCC-cE----EEE-eccC-CCCcCCCCeeEEEECCCCCEEEEEe
Q 011970 320 IFL-YENQLFLTFR-NRTVAVWNFRG-EL----VTS-FEDH-LLWHPDCNTNNIYITSDQDLIISYC 377 (474)
Q Consensus 320 ~Fs-pdg~llaS~s-D~tIklWd~~G-~l----l~t-l~gH-~~~~~~~~v~svafSpDg~~LaS~s 377 (474)
++. .+|.++.+-- ...|..||.++ ++ +.+ ..+. ..| ...+.+.+||.+-+..+
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~-----pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVF-----GTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCS-----EEEEEECTTSCEEEEEC
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccc-----cCeEEECCCCeEEEEEC
Confidence 664 6899998887 88999999977 32 222 2222 235 57888888888888754
Done!