Query 011972
Match_columns 474
No_of_seqs 237 out of 663
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 19:04:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011972.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011972hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fxta1 d.17.4.13 (A:234-425) 100.0 5.5E-47 4E-51 356.6 19.5 181 285-467 3-191 (192)
2 d2cw9a1 d.17.4.13 (A:270-451) 100.0 1.4E-40 1E-44 309.8 21.2 169 300-472 12-181 (182)
3 d2ux0a1 d.17.4.7 (A:387-521) A 92.1 0.49 3.6E-05 37.1 9.9 112 336-469 11-134 (135)
4 d2r4ia1 d.17.4.15 (A:1-122) Un 90.5 0.55 4E-05 36.5 8.6 105 338-468 7-119 (122)
5 d3cnxa1 d.17.4.17 (A:5-157) Un 89.5 4.6 0.00033 33.0 15.8 27 337-363 8-34 (153)
6 d2rcda1 d.17.4.18 (A:1-127) Un 88.1 1.2 9E-05 35.0 9.1 40 325-364 2-41 (127)
7 d3cu3a1 d.17.4.28 (A:9-170) Un 85.4 4.8 0.00035 33.0 11.9 109 337-469 8-128 (162)
8 d3bb9a1 d.17.4.16 (A:27-147) U 85.1 0.21 1.5E-05 39.0 2.6 28 338-365 5-32 (121)
9 d2owpa1 d.17.4.18 (A:1-128) Hy 76.9 8.5 0.00062 30.1 9.9 31 334-364 8-38 (128)
10 d2f86b1 d.17.4.7 (B:343-471) A 75.9 4.9 0.00036 30.4 7.9 28 338-365 11-38 (129)
11 d2gxfa1 d.17.4.22 (A:1-128) Hy 73.3 4 0.00029 31.9 6.9 29 337-365 4-32 (128)
12 d3b7ca1 d.17.4.16 (A:1-121) Un 72.4 12 0.00087 28.3 9.5 28 337-364 5-32 (121)
13 d3ec9a1 d.17.4.10 (A:10-139) U 58.5 12 0.00085 28.6 6.8 28 338-365 4-31 (130)
14 d3ebta1 d.17.4.9 (A:1-131) Unc 54.5 12 0.00085 28.7 6.1 27 339-365 5-31 (131)
15 d3dmca1 d.17.4.10 (A:1-133) Un 48.1 2.3 0.00016 34.0 0.7 31 335-365 10-40 (133)
16 d2geya1 d.17.4.9 (A:2-145) Put 44.3 3.3 0.00024 33.3 1.1 28 337-364 4-31 (144)
17 d2rfra1 d.17.4.28 (A:1-153) Un 42.1 52 0.0038 25.7 8.6 25 340-364 22-46 (153)
18 d1gs9a_ a.24.1.1 (A:) Apolipop 39.5 75 0.0055 25.3 9.3 18 119-136 122-139 (144)
19 d2gexa1 d.17.4.9 (A:2-139) Nog 38.8 4.2 0.00031 32.2 0.9 27 339-365 6-32 (138)
20 d3blza1 d.17.4.14 (A:3-126) Un 33.9 90 0.0066 23.5 9.2 24 342-365 15-38 (124)
21 d1tuha_ d.17.4.11 (A:) Hypothe 32.9 47 0.0034 24.8 6.5 24 341-364 9-32 (131)
22 d1j1va_ a.4.12.2 (A:) Chromoso 31.4 13 0.00095 28.4 2.7 35 42-76 57-91 (94)
23 d2k54a1 d.17.4.29 (A:1-123) Un 30.6 8.1 0.00059 30.0 1.4 28 338-365 5-32 (123)
24 d1s5aa_ d.17.4.10 (A:) Hypothe 30.1 12 0.00087 29.0 2.4 30 336-365 5-34 (139)
25 d1nwwa_ d.17.4.8 (A:) Limonene 29.8 10 0.00073 30.2 1.8 27 339-365 21-47 (145)
26 d3ejva1 d.17.4.28 (A:2-160) Un 29.7 1.2E+02 0.0089 23.8 10.6 27 339-365 9-35 (159)
27 d3d9ra1 d.17.4.27 (A:3-134) Un 26.8 1.1E+02 0.0083 22.4 13.3 29 336-364 8-36 (132)
28 d1z1sa1 d.17.4.10 (A:1-129) Un 25.4 11 0.00078 28.7 1.2 28 338-365 3-30 (129)
29 d3en8a1 d.17.4.20 (A:1-127) Un 24.7 14 0.001 28.8 1.8 29 337-365 5-33 (127)
30 d1ex0a4 d.3.1.4 (A:191-510) Tr 22.6 69 0.005 29.8 6.5 46 416-464 160-206 (320)
31 d2r25a1 a.24.10.2 (A:2-167) Ph 20.5 1.8E+02 0.013 23.6 8.4 50 332-381 32-92 (166)
32 d1l8qa1 a.4.12.2 (A:290-399) C 20.2 24 0.0017 27.8 2.3 35 42-76 70-104 (110)
No 1
>d2fxta1 d.17.4.13 (A:234-425) Translocase of inner mitochondrial membrane TIMM44 (TIM44), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=5.5e-47 Score=356.55 Aligned_cols=181 Identities=29% Similarity=0.583 Sum_probs=167.5
Q ss_pred HHhhhh-hhccccchhhhhhcccc---cccccChHHHHHHHHHhcCCCCChhhHHHHHHHHHHH-HHHHHHcCCHHHHHh
Q 011972 285 EDVRER-WETSDNPIVHKIQDMNE---TIFQETDAAASIKEIRRRDPSFSLPDFVSEVQEAIRP-VLSAYMKGDVETLKK 359 (474)
Q Consensus 285 ~d~k~~-~eeSdnP~v~~i~di~d---~lf~ete~a~al~eIk~~DPsFd~~~Fl~~are~~ip-IleAy~~GDle~Lk~ 359 (474)
++||++ |||||||+|...++|+| ++|++|+++++|++||++||+||..+|+.+|+.+|+| |++||++||++.|++
T Consensus 3 ~~~~~~~~~~sdnp~v~~~r~i~d~~~~~f~ete~~~~l~~ik~~Dp~F~~~~Fl~gak~~~~p~Il~Af~~GD~~~Lk~ 82 (192)
T d2fxta1 3 QSLKNKLWDESENPLIVVMRKITNKVGGFFAETESSRVYSQFKLMDPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKK 82 (192)
T ss_dssp HHHHHHHHTCCSSHHHHHHHHHHTTTTCCBCCCCSHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHTTCHHHHHH
T ss_pred hHhcccccccCCCcceeeeeeeccccccccccCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 389998 99999999977777776 6999999999999999999999999999999999996 999999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHhCCCcccceEEeecceeEEEEEEe--CCeeEEEEEEEEeEEEEEEc-CCCCeecCCCCceee
Q 011972 360 YCSPEVIERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMM--GSSPIIIVAFQTQQIYCVRD-KHGTITEGGKDTIQT 436 (474)
Q Consensus 360 ~csea~y~~~~~~Ik~r~~~G~~~d~kIL~I~~veLv~ak~~--e~~pvitVrF~aQqI~~vRD-k~GeVVEGd~d~i~~ 436 (474)
||++++|+.|+++|++|.++|.++++++|+|++++|++++++ ++.|+|+|+|+||||+|+|| ++|+||+|+++.+..
T Consensus 83 lls~~vy~~f~~~I~~r~~~g~~~~~~ii~I~~~~I~~a~~~~~~~~~~itV~F~t~qi~~~~d~k~G~IieGd~d~i~~ 162 (192)
T d2fxta1 83 WFSEAPFNVYAAQQKIFKEQDVYADGRILDIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILM 162 (192)
T ss_dssp HBCHHHHHHHHHHHHHHHHTTEECCEEECCCEEEEEEEEEEETTTTEEEEEEEEEECEEECCEETTTBTTSSCSCCCCCC
T ss_pred HhhHHHHHHHHHHHHHHHHcCCeeeEEEeccceeEEEEEEEecCCCeEEEEEEEEEEEEEEEEecCCCcEecCCCCccEE
Confidence 999999999999999999999999999999999999999997 46899999999999999998 689999999999999
Q ss_pred EeEEEEEEEecccccCCCCCCCCeEEeeeec
Q 011972 437 VYYAWAMQQVDAEELGEDVLYPIWKLREMQQ 467 (474)
Q Consensus 437 v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq 467 (474)
+.|+|+|+| +....+|+ .+++|+|++|+|
T Consensus 163 v~d~WtF~R-~~~~~~pn-~~~~W~LiE~~~ 191 (192)
T d2fxta1 163 SSYAMVFTR-DPEQIDDD-ETEGWKILEFVR 191 (192)
T ss_dssp EEEEEEEEC-CSSSCTTS-SSTTCEEEEEEC
T ss_pred EEEEEEEEE-cCccCCCC-CCCCEEEEEeec
Confidence 999999977 55554432 356799999987
No 2
>d2cw9a1 d.17.4.13 (A:270-451) Translocase of inner mitochondrial membrane TIMM44 (TIM44), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.4e-40 Score=309.83 Aligned_cols=169 Identities=27% Similarity=0.577 Sum_probs=158.5
Q ss_pred hhhhcccccccccChHHHHHHHHHhcCCCCChhhHHHHHHH-HHHHHHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHh
Q 011972 300 HKIQDMNETIFQETDAAASIKEIRRRDPSFSLPDFVSEVQE-AIRPVLSAYMKGDVETLKKYCSPEVIERCKAEHTAYQS 378 (474)
Q Consensus 300 ~~i~di~d~lf~ete~a~al~eIk~~DPsFd~~~Fl~~are-~~ipIleAy~~GDle~Lk~~csea~y~~~~~~Ik~r~~ 378 (474)
+++.++++++|++++.+++|++|+++||+||.++|+.+|+. +|.+|++||++||++.|++||++++|+.|..+|++|..
T Consensus 12 ~~v~~~~~~~~~~~~~~~~l~~i~~~Dp~F~~~~Fl~gAk~~~~~~i~~A~~~gD~~~L~~llt~~~~~~f~~~i~~r~~ 91 (182)
T d2cw9a1 12 DKVTDLLGGLFSKTEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKA 91 (182)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhcCCCCCCHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999986 78889999999999999999999999999999999999
Q ss_pred CCCcccceEEeecceeEEEEEEeCCeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEeEEEEEEEecccccCCCCCCC
Q 011972 379 HGIFFDNRILHVSEVEVRETKMMGSSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYP 458 (474)
Q Consensus 379 ~G~~~d~kIL~I~~veLv~ak~~e~~pvitVrF~aQqI~~vRDk~GeVVEGd~d~i~~v~yvW~f~r~d~eel~~~~~~~ 458 (474)
+|.+.+.++|+|++++|+++++.++.|+|+|+|.+|||+|+||++|+||+|+|+.+..+.|+|+|+|+ ....+| ++
T Consensus 92 ~g~~~~~~~i~i~~~ei~~a~~~~~~~~itV~F~~~qi~~~~D~~G~iveG~~d~i~~v~e~W~F~R~-~~s~~P---n~ 167 (182)
T d2cw9a1 92 LGLQFHSRILDIDNVDLAMGKMVEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRMLYVWALCRD-QDELNP---YA 167 (182)
T ss_dssp TTCEECCEEEEEEEEEEEEEEEETTEEEEEEEEEEEEECEEECTTSCEEEECTTCCEEEEEEEEEEEC-TTCSCG---GG
T ss_pred CCCeeeeeecccccceeEEEEeeCCceEEEEEEEEEehhheecCCCCEecCCCCCceEEEEEEEEEEc-CcCCCC---CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999884 332222 34
Q ss_pred CeEEeeeecccccc
Q 011972 459 IWKLREMQQLGVQA 472 (474)
Q Consensus 459 ~WrL~eiqq~g~~a 472 (474)
+|+|++||+.|...
T Consensus 168 ~W~L~~iq~~~~~~ 181 (182)
T d2cw9a1 168 AWRLLDISASSTEQ 181 (182)
T ss_dssp CEEEEEEEEEECTT
T ss_pred CEEEEEeccccccc
Confidence 59999999999764
No 3
>d2ux0a1 d.17.4.7 (A:387-521) Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.07 E-value=0.49 Score=37.06 Aligned_cols=112 Identities=16% Similarity=0.205 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHH----------HHHHHHHHHhCCCcccceEEee--cceeEEEEEEeCC
Q 011972 336 SEVQEAIRPVLSAYMKGDVETLKKYCSPEVIER----------CKAEHTAYQSHGIFFDNRILHV--SEVEVRETKMMGS 403 (474)
Q Consensus 336 ~~are~~ipIleAy~~GDle~Lk~~csea~y~~----------~~~~Ik~r~~~G~~~d~kIL~I--~~veLv~ak~~e~ 403 (474)
+.....+..+.+||.+||.+.+..+++|++.-. -...+..+.............+ .++.+ .+.++
T Consensus 11 ~eI~~l~~~~~~A~~~~D~~~~~~~~~~d~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~gd 87 (135)
T d2ux0a1 11 QEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHV---HVIGE 87 (135)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCEEEHHHHHHHHHHHTTTTCCSCEEEEEEEEEE---EECST
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhCcCCCcEEEeccCCceechHHHHHHHHHHHhccCCcccEEEecceeE---EEEcC
Confidence 445556677899999999999999998873211 1233444433322223333322 22222 23444
Q ss_pred eeEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEeEEEEEEEecccccCCCCCCCCeEEeeeeccc
Q 011972 404 SPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLG 469 (474)
Q Consensus 404 ~pvitVrF~aQqI~~vRDk~GeVVEGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g 469 (474)
...++.... .....+.+|..+.+ ...+..+|+|. +.+|+|+-.+..+
T Consensus 88 daa~~~~~~---~~~~~~~~g~~~~~------~~r~T~V~~r~----------~g~Wkivh~H~S~ 134 (135)
T d2ux0a1 88 DAACIAYIR---LTQYIDGQGRPRTS------QSEETRVWHRR----------DGKWLNVHYHCSG 134 (135)
T ss_dssp TEEEEEEEE---EEEEECTTSCEEEE------EEEEEEEEEEE----------TTEEEEEEEEEEC
T ss_pred cEEEEEEEE---EEEEeccCCceeeE------eEEEEEEEEEE----------CCEEEEEEEEecC
Confidence 443322211 22334455644443 45666677664 2679999876544
No 4
>d2r4ia1 d.17.4.15 (A:1-122) Uncharacterized protein CHU142 {Cytophaga hutchinsonii [TaxId: 985]}
Probab=90.54 E-value=0.55 Score=36.55 Aligned_cols=105 Identities=14% Similarity=0.194 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHHHH--------HHHHHHHHHHhCCCcccceEEeecceeEEEEEEeCCeeEEEE
Q 011972 338 VQEAIRPVLSAYMKGDVETLKKYCSPEVIE--------RCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGSSPIIIV 409 (474)
Q Consensus 338 are~~ipIleAy~~GDle~Lk~~csea~y~--------~~~~~Ik~r~~~G~~~d~kIL~I~~veLv~ak~~e~~pvitV 409 (474)
..+....+.+|+.+||.+.|..+++|++.- .-.+.++.+..... ....+ ......+...++.++++.
T Consensus 7 I~~~~~~~~~A~~~~D~~~l~~l~~~d~~~~~~~G~~~~~~~~i~~~~~~~~----~~~~~-~~~~~~v~~~gd~Av~~~ 81 (122)
T d2r4ia1 7 ILDCEKKLLTAIQNNDVESLEVLLHDDLLFIIPSGETVTKETDIAAYSSGKI----ALRAV-VPSDYIIRIIHDTVVVSV 81 (122)
T ss_dssp HTHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHTTCE----EEEEE-EEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHhhhcccEEEEeccceeccHHHHHHHHhcCcc----cccce-eeeeeEEEEEeceeeEee
Confidence 344455589999999999999999887520 11333444443222 22222 122234455677777776
Q ss_pred EEEEeEEEEEEcCCCCeecCCCCceeeEeEEEEEEEecccccCCCCCCCCeEEeeeecc
Q 011972 410 AFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQL 468 (474)
Q Consensus 410 rF~aQqI~~vRDk~GeVVEGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~ 468 (474)
+.... +. ..|....+ ..+.+.+|.- . +.+|+|+..+..
T Consensus 82 ~~~~~----~~-~~g~~~~~----~~r~t~V~~k--~----------~g~Wkiv~~h~S 119 (122)
T d2r4ia1 82 NIEIK----GE-YMEHTLDN----TFRYLRVWKL--F----------DGNWKVIAGSCT 119 (122)
T ss_dssp EEEEE----EE-ETTEEEEE----EEEEEEEEEE--E----------TTEEEEEEEEEE
T ss_pred EEEEE----Ee-cCCCccee----eEEEEEEEEE--E----------CCEEEEEEEEec
Confidence 55443 11 23433322 2344555544 3 267999987753
No 5
>d3cnxa1 d.17.4.17 (A:5-157) Uncharacterized protein SAV4671 {Streptomyces avermitilis [TaxId: 33903]}
Probab=89.52 E-value=4.6 Score=32.95 Aligned_cols=27 Identities=30% Similarity=0.284 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCH
Q 011972 337 EVQEAIRPVLSAYMKGDVETLKKYCSP 363 (474)
Q Consensus 337 ~are~~ipIleAy~~GDle~Lk~~cse 363 (474)
.++.+.....+||..||++.|..+-++
T Consensus 8 ~v~aa~~af~~A~~~~D~~a~~~~w~~ 34 (153)
T d3cnxa1 8 QVGLANTAFYEAMERGDFETLSSLWLT 34 (153)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcc
Confidence 445555556779999999999885443
No 6
>d2rcda1 d.17.4.18 (A:1-127) Uncharacterized protein ECA3500 {Pectobacterium atrosepticum [TaxId: 29471]}
Probab=88.11 E-value=1.2 Score=35.03 Aligned_cols=40 Identities=18% Similarity=0.166 Sum_probs=34.6
Q ss_pred cCCCCChhhHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 011972 325 RDPSFSLPDFVSEVQEAIRPVLSAYMKGDVETLKKYCSPE 364 (474)
Q Consensus 325 ~DPsFd~~~Fl~~are~~ipIleAy~~GDle~Lk~~csea 364 (474)
+++.=|.++...+.+.++....+||..||++.|..+.+|+
T Consensus 2 ~~~~v~~~~~~aeI~a~~~~~~~A~~~~D~~~l~~l~a~D 41 (127)
T d2rcda1 2 LPDDVNQADVLADVTAAFYRYEKALTGNDVAVLDELFWHD 41 (127)
T ss_dssp CGGGBCCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHBCCS
T ss_pred CccccCChhHHHHHHHHHHHHHHHHHcCCHHHHHHhhcCC
Confidence 4455667888889999999999999999999999998776
No 7
>d3cu3a1 d.17.4.28 (A:9-170) Uncharacterized protein NpunR1993 {Nostoc punctiforme [TaxId: 272131]}
Probab=85.44 E-value=4.8 Score=32.98 Aligned_cols=109 Identities=11% Similarity=0.109 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH------------HHHHHHHHHHHHhCCCcccceEEeecceeEEEEEEeCCe
Q 011972 337 EVQEAIRPVLSAYMKGDVETLKKYCSPEV------------IERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGSS 404 (474)
Q Consensus 337 ~are~~ipIleAy~~GDle~Lk~~csea~------------y~~~~~~Ik~r~~~G~~~d~kIL~I~~veLv~ak~~e~~ 404 (474)
..+..+....+||.+||.+.+..+++++. ...+.+.+...-.... ....+.+....|. .+.++.
T Consensus 8 aI~al~~~~~~A~~~~D~d~~~~l~a~D~~~~~~~g~~~~G~~~i~~~~~~~~~~~~--~~~~~~~~~~~i~--~l~~d~ 83 (162)
T d3cu3a1 8 AIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFEGTHLKGRKEIAAFHQQAFDTVV--KGTRLEGEVDFVR--FVNSQL 83 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCEEEHHHHHHHHHHHHHHTTT--TTCEEEEEEEEEE--EEETTE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHhhccCeeeecccccccCCHHHHHHHHHHHHhhcc--cceeEEeeceEEE--EecCCE
Confidence 34555566889999999999999887762 2333333333322221 2233333333332 123556
Q ss_pred eEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEeEEEEEEEecccccCCCCCCCCeEEeeeeccc
Q 011972 405 PIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLG 469 (474)
Q Consensus 405 pvitVrF~aQqI~~vRDk~GeVVEGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g 469 (474)
+++...+.. ..... |++.......+.++|.|. +.+|+|...+-..
T Consensus 84 Avv~~~~~~-----~~~~~-----~~~~~~~~~r~t~Vl~K~----------dG~WrIa~~H~tr 128 (162)
T d3cu3a1 84 ALMLVVIRV-----ILPGQ-----TETSASRDSLPLYVVTKG----------DEGWQIEGLLNTR 128 (162)
T ss_dssp EEEEEEEEE-----ECTTC-----SSBCGGGCBCCEEEEEEE----------TTEEEEEEEECCB
T ss_pred EEEEEEEEE-----eecCC-----CCCCcceeEEEEEEEEEE----------CCEEEEEEEeccC
Confidence 655554432 22221 222222345667778664 2679999887543
No 8
>d3bb9a1 d.17.4.16 (A:27-147) Uncharacterized protein Sfri1973 {Shewanella frigidimarina [TaxId: 56812]}
Probab=85.06 E-value=0.21 Score=38.96 Aligned_cols=28 Identities=11% Similarity=0.235 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 338 VQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 338 are~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
+.+.+....+|+.+||.+.|..+|+|++
T Consensus 5 ~~~v~~~~~~A~~~~D~~~~~~l~a~D~ 32 (121)
T d3bb9a1 5 AGNVVKQFHAALQMGNEAIVRQSLAANV 32 (121)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhhCCCe
Confidence 4455666889999999999999998873
No 9
>d2owpa1 d.17.4.18 (A:1-128) Hypothetical protein BxeB1374 {Burkholderia xenovorans [TaxId: 36873]}
Probab=76.91 E-value=8.5 Score=30.08 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 011972 334 FVSEVQEAIRPVLSAYMKGDVETLKKYCSPE 364 (474)
Q Consensus 334 Fl~~are~~ipIleAy~~GDle~Lk~~csea 364 (474)
=....+.++....+||..||++.|-.+.+++
T Consensus 8 ~~a~I~a~~~~~~~A~~~~D~~~l~~l~a~d 38 (128)
T d2owpa1 8 IVAQVQAAFVEYERALVENDIEAMNALFWHT 38 (128)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHTBCCS
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhccC
Confidence 3556777777788999999999999987665
No 10
>d2f86b1 d.17.4.7 (B:343-471) Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A {Caenorhabditis elegans [TaxId: 6239]}
Probab=75.87 E-value=4.9 Score=30.38 Aligned_cols=28 Identities=21% Similarity=0.399 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 338 VQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 338 are~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
..+++..+.+||..||.+.+..+++|+.
T Consensus 11 I~~~~~~~~~A~~~~D~~~~~~~~~~d~ 38 (129)
T d2f86b1 11 IVRVTQTLLDAISCKDFETYTRLCDTSM 38 (129)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcCCc
Confidence 3445556889999999999999988875
No 11
>d2gxfa1 d.17.4.22 (A:1-128) Hypothetical protein YybH {Bacillus subtilis [TaxId: 1423]}
Probab=73.27 E-value=4 Score=31.93 Aligned_cols=29 Identities=24% Similarity=0.355 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 337 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 337 ~are~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
..++.+....+||.+||.+.|-.++++++
T Consensus 4 ~I~~l~~~~~~A~~~~D~d~~~~l~~~Da 32 (128)
T d2gxfa1 4 QLKDIISACDLAIQNEDFDTLMNYYSEDA 32 (128)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhccCC
Confidence 45667777899999999999999887663
No 12
>d3b7ca1 d.17.4.16 (A:1-121) Uncharacterized protein SO0125 {Shewanella oneidensis [TaxId: 70863]}
Probab=72.41 E-value=12 Score=28.26 Aligned_cols=28 Identities=11% Similarity=0.252 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 011972 337 EVQEAIRPVLSAYMKGDVETLKKYCSPE 364 (474)
Q Consensus 337 ~are~~ipIleAy~~GDle~Lk~~csea 364 (474)
+.+.++....+||.+||.+.+..+.+++
T Consensus 5 eI~~~i~~~~~A~~~gD~d~~~~~~~~d 32 (121)
T d3b7ca1 5 DIVQLLKGQEEAWNRGDLDAYMQGYWQN 32 (121)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTBCCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHhcc
Confidence 4566667788999999999998864444
No 13
>d3ec9a1 d.17.4.10 (A:10-139) Uncharacterized protein BTHI0051 {Burkholderia thailandensis [TaxId: 57975]}
Probab=58.47 E-value=12 Score=28.59 Aligned_cols=28 Identities=11% Similarity=0.115 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 338 VQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 338 are~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
+.+.+....+||.++|++.+..+|+|++
T Consensus 4 ~~~iv~~~~~A~~~~D~d~~~~~~a~D~ 31 (130)
T d3ec9a1 4 PYQIVADHYAASDRHDPAAMMADIAPAI 31 (130)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHCcCHHHHHHhcCccc
Confidence 4556666999999999999999999985
No 14
>d3ebta1 d.17.4.9 (A:1-131) Uncharacterized protein BPSS0132 {Burkholderia pseudomallei [TaxId: 28450]}
Probab=54.51 E-value=12 Score=28.70 Aligned_cols=27 Identities=19% Similarity=0.384 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 339 QEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 339 re~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
++.+..+.+||.+||++.|..+|+|++
T Consensus 5 ~~~v~~~~~a~~~~D~~~~~~~~a~D~ 31 (131)
T d3ebta1 5 MQTVRESYEAFHRRDLPGVLAALAPDV 31 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHhCcce
Confidence 456666899999999999999988875
No 15
>d3dmca1 d.17.4.10 (A:1-133) Uncharacterized protein Ava2261 {Anabaena variabilis [TaxId: 1172]}
Probab=48.13 E-value=2.3 Score=34.03 Aligned_cols=31 Identities=3% Similarity=0.120 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 335 VSEVQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 335 l~~are~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
++-+++.|..+++|+..||++.+..+|+|++
T Consensus 10 ~~~a~~~~e~f~~a~~~gD~d~~~~l~~~D~ 40 (133)
T d3dmca1 10 LKVAHQGFEFFTQGLATGEWQKFLDMLTEDF 40 (133)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHhccce
Confidence 5678889999999999999999999998764
No 16
>d2geya1 d.17.4.9 (A:2-145) Putative hydroxylase AclR {Streptomyces galilaeus [TaxId: 33899]}
Probab=44.30 E-value=3.3 Score=33.34 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 011972 337 EVQEAIRPVLSAYMKGDVETLKKYCSPE 364 (474)
Q Consensus 337 ~are~~ipIleAy~~GDle~Lk~~csea 364 (474)
..+..+...++||.+||++.|..+|+|+
T Consensus 4 ~~~~l~~~~~~A~n~~D~~~~~~~~a~d 31 (144)
T d2geya1 4 ERKALCLEMVAAWNRWDLSGIIKHWSPD 31 (144)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHhCcc
Confidence 4455666689999999999999999865
No 17
>d2rfra1 d.17.4.28 (A:1-153) Uncharacterized protein Saro3722 {Novosphingobium aromaticivorans [TaxId: 48935]}
Probab=42.10 E-value=52 Score=25.67 Aligned_cols=25 Identities=24% Similarity=0.197 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHcCCHHHHHhhcCHH
Q 011972 340 EAIRPVLSAYMKGDVETLKKYCSPE 364 (474)
Q Consensus 340 e~~ipIleAy~~GDle~Lk~~csea 364 (474)
+.+-.-..|++.||++.+..+.+|+
T Consensus 22 ~l~~~y~~~~D~~d~~~~~~lFt~d 46 (153)
T d2rfra1 22 ELIARYGPLADSGDAEALSELWVED 46 (153)
T ss_dssp HHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHhCCCHHHHHhhccCC
Confidence 3333456778899999999888775
No 18
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=39.52 E-value=75 Score=25.32 Aligned_cols=18 Identities=0% Similarity=0.348 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHhhhhhcc
Q 011972 119 SMKEKISAATEEVKGTFR 136 (474)
Q Consensus 119 ~~k~k~~~~~e~v~~~~~ 136 (474)
.++.++..-++.++..+.
T Consensus 122 el~~~l~~~~eel~~kL~ 139 (144)
T d1gs9a_ 122 KLRKRLLRDADDLQKRLA 139 (144)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 344556666666665543
No 19
>d2gexa1 d.17.4.9 (A:2-139) Nogalamycin biosynthesis protein SnoL {Streptomyces nogalater [TaxId: 38314]}
Probab=38.84 E-value=4.2 Score=32.16 Aligned_cols=27 Identities=22% Similarity=0.331 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 339 QEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 339 re~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
++.+..+++||.+||++.|..+++|++
T Consensus 6 ~e~~~~~~~a~~~~D~~~~~~~~a~D~ 32 (138)
T d2gexa1 6 KERCLEMVAAWNRWDVSGVVAHWAPDV 32 (138)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHccCHHHHHHHhCccc
Confidence 455666889999999999999998654
No 20
>d3blza1 d.17.4.14 (A:3-126) Uncharacterized protein Sbal0622 {Shewanella baltica [TaxId: 62322]}
Probab=33.94 E-value=90 Score=23.53 Aligned_cols=24 Identities=13% Similarity=0.088 Sum_probs=18.6
Q ss_pred HHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 342 IRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 342 ~ipIleAy~~GDle~Lk~~csea~ 365 (474)
+..-.+|+..||.+.|+..++|++
T Consensus 15 i~~Y~~~~d~~D~~~l~~~F~~da 38 (124)
T d3blza1 15 LSKYNEGGKKADSTIMRPAFSSQA 38 (124)
T ss_dssp HHHHHHHHHHTCHHHHGGGEEEEE
T ss_pred HHHHHHHHHcCCHHHHHHhcCCCc
Confidence 333567888999999999887764
No 21
>d1tuha_ d.17.4.11 (A:) Hypothetical protein egc068 from a soil-derived mobile gene cassette {uncultured organism [TaxId: 155900]}
Probab=32.89 E-value=47 Score=24.83 Aligned_cols=24 Identities=25% Similarity=0.455 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCHHHHHhhcCHH
Q 011972 341 AIRPVLSAYMKGDVETLKKYCSPE 364 (474)
Q Consensus 341 ~~ipIleAy~~GDle~Lk~~csea 364 (474)
.+...++||..||++.+..+++|+
T Consensus 9 vv~~~~~a~~~~D~~~~~~l~~~D 32 (131)
T d1tuha_ 9 TVRRGYAAFNSGDMKTLTELFDEN 32 (131)
T ss_dssp HHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred HHHHHHHHHHcCCHHHHHHhcCCC
Confidence 444588999999999999999885
No 22
>d1j1va_ a.4.12.2 (A:) Chromosomal replication initiation factor DnaA C-terminal domain IV {Escherichia coli [TaxId: 562]}
Probab=31.45 E-value=13 Score=28.44 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=29.7
Q ss_pred CCCCccchHHHHHHHHHHhhhChhhHHHHHHHHHH
Q 011972 42 SNRQFSVFKEFSKKIKGEAESNPEFKHSVKELKKK 76 (474)
Q Consensus 42 ~~r~~~~f~~f~~~ik~E~~kn~E~qe~ik~l~e~ 76 (474)
++|..+-..-=+++++++++.|++|++.|.++.+.
T Consensus 57 g~rdHsTV~~a~kki~~~~~~d~~~~~~i~~i~~~ 91 (94)
T d1j1va_ 57 GGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRT 91 (94)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 55677767777889999999999999999998876
No 23
>d2k54a1 d.17.4.29 (A:1-123) Uncharacterized protein Atu0742 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=30.59 E-value=8.1 Score=30.03 Aligned_cols=28 Identities=14% Similarity=0.395 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 338 VQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 338 are~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
.+..+...++||.+||++.+-.+++|++
T Consensus 5 ~~~~V~~~~~A~~~~D~e~~~~~~aeD~ 32 (123)
T d2k54a1 5 IELPVQKQLEAYNARDIDAFMAWWADDC 32 (123)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHhcCCCe
Confidence 4455566899999999999999999886
No 24
>d1s5aa_ d.17.4.10 (A:) Hypothetical protein YesE {Bacillus subtilis [TaxId: 1423]}
Probab=30.13 E-value=12 Score=29.02 Aligned_cols=30 Identities=10% Similarity=0.272 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 336 SEVQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 336 ~~are~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
+.+++.+...++||..||++.+..+++|++
T Consensus 5 ~~~~e~v~~~~~a~~~~D~~~~~~l~~eD~ 34 (139)
T d1s5aa_ 5 EKACETLRKFMAYMLEKDMKSWTELWDENA 34 (139)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHhCCce
Confidence 456778888999999999999999998776
No 25
>d1nwwa_ d.17.4.8 (A:) Limonene-1,2-epoxide hydrolase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=29.77 E-value=10 Score=30.22 Aligned_cols=27 Identities=15% Similarity=0.329 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 339 QEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 339 re~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
++.+....+||..||++.|..+|+|++
T Consensus 21 ~~lv~~~~~A~~~~D~~~~~~~~~~D~ 47 (145)
T d1nwwa_ 21 EKIVLEFMDALTSNDAAKLIEYFAEDT 47 (145)
T ss_dssp HHHHHHHHHHGGGCCHHHHHTTBCSSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhccc
Confidence 345566899999999999999999985
No 26
>d3ejva1 d.17.4.28 (A:2-160) Uncharacterized protein Saro2766 {Novosphingobium aromaticivorans [TaxId: 48935]}
Probab=29.74 E-value=1.2e+02 Score=23.77 Aligned_cols=27 Identities=15% Similarity=0.213 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 339 QEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 339 re~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
++.+-.-..+++++|.+.|..+.+|++
T Consensus 9 ~~l~~rY~~~~D~~d~d~~~~lFteDa 35 (159)
T d3ejva1 9 LNVLGQYTRAHDRRDPDAMAALFAPEA 35 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHhhcCCCe
Confidence 333444567788999999999988874
No 27
>d3d9ra1 d.17.4.27 (A:3-134) Uncharacterized protein ECA1476 {Pectobacterium atrosepticum [TaxId: 29471]}
Probab=26.75 E-value=1.1e+02 Score=22.44 Aligned_cols=29 Identities=14% Similarity=0.285 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 011972 336 SEVQEAIRPVLSAYMKGDVETLKKYCSPE 364 (474)
Q Consensus 336 ~~are~~ipIleAy~~GDle~Lk~~csea 364 (474)
...+..+..-..||.+||.+.+-.+++++
T Consensus 8 ~aI~~~~~~y~~A~~~~D~~~~~~l~t~D 36 (132)
T d3d9ra1 8 AVIEAAAIAYLTAFNRADIPAVIATYTDD 36 (132)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence 34555666688999999999999987766
No 28
>d1z1sa1 d.17.4.10 (A:1-129) Uncharacterized protein PA3332 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.41 E-value=11 Score=28.70 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 338 VQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 338 are~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
+++.....++||..||.+.+..+++|++
T Consensus 3 ~~eiv~~~~~~~~~gD~~~~~~l~a~D~ 30 (129)
T d1z1sa1 3 AKEILVHSLRLLENGDARGWCDLFHPEG 30 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHhcCce
Confidence 4556666899999999999999999987
No 29
>d3en8a1 d.17.4.20 (A:1-127) Uncharacterized protein BxeB2092 {Burkholderia xenovorans [TaxId: 36873]}
Probab=24.70 E-value=14 Score=28.82 Aligned_cols=29 Identities=17% Similarity=0.306 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 011972 337 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 365 (474)
Q Consensus 337 ~are~~ipIleAy~~GDle~Lk~~csea~ 365 (474)
..++.+....+||.+||++.+..++++++
T Consensus 5 ~~~~~v~~~~~A~~~gD~da~~~l~adD~ 33 (127)
T d3en8a1 5 KIREALNAHWQASAAGDFDAEHDIYDDDA 33 (127)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhcCCE
Confidence 45666666899999999999999887654
No 30
>d1ex0a4 d.3.1.4 (A:191-510) Transglutaminase catalytic domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
Probab=22.63 E-value=69 Score=29.80 Aligned_cols=46 Identities=15% Similarity=0.327 Sum_probs=28.7
Q ss_pred EEEEEcCCCCeecC-CCCceeeEeEEEEEEEecccccCCCCCCCCeEEee
Q 011972 416 IYCVRDKHGTITEG-GKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLRE 464 (474)
Q Consensus 416 I~~vRDk~GeVVEG-d~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~e 464 (474)
|+.+.|.+|++++. ..|.| -..++|+=.=|...||.+ .+.+|++++
T Consensus 160 iD~y~de~G~~~~~~~~Dsi-WNFHvWnE~WM~RpDL~~--gy~GWQ~lD 206 (320)
T d1ex0a4 160 MDIFLEEDGNVNSKLTKDSV-WNYHCWNEAWMTRPDLPV--GFGGWQAVD 206 (320)
T ss_dssp EEEEECTTSCBCTTTCCCCC-EEEEEEEEEEECCTTSCT--TCCEEEEEE
T ss_pred eeeeeccCCCCCcCCCCCce-EeeeeceeeeecccccCc--CCCcceecc
Confidence 45688999997754 44444 345666642222234643 488999997
No 31
>d2r25a1 a.24.10.2 (A:2-167) Phosphorelay protein ypd1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.53 E-value=1.8e+02 Score=23.59 Aligned_cols=50 Identities=8% Similarity=0.033 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHHHHHHHHHc-CCHHHHHhh----------cCHHHHHHHHHHHHHHHhCCC
Q 011972 332 PDFVSEVQEAIRPVLSAYMK-GDVETLKKY----------CSPEVIERCKAEHTAYQSHGI 381 (474)
Q Consensus 332 ~~Fl~~are~~ipIleAy~~-GDle~Lk~~----------csea~y~~~~~~Ik~r~~~G~ 381 (474)
..|+..+...+..|..|+.. +|++.|... ++-.-+..++..|..+...+.
T Consensus 32 ~~F~~~~~~~~~~l~~al~~~~d~~~l~~~aH~lKgss~~~G~~~~~~~~~~ie~~~~~~~ 92 (166)
T d2r25a1 32 IQFIDQAQTTFAQMQRQLDGEKNLTELDNLGHFLKGSSAALGLQRIAWVCERIQNLGRKME 92 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHcccc
Confidence 57888999889899999965 799998766 344556677888888876653
No 32
>d1l8qa1 a.4.12.2 (A:290-399) Chromosomal replication initiation factor DnaA C-terminal domain IV {Aquifex aeolicus [TaxId: 63363]}
Probab=20.16 E-value=24 Score=27.80 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=28.9
Q ss_pred CCCCccchHHHHHHHHHHhhhChhhHHHHHHHHHH
Q 011972 42 SNRQFSVFKEFSKKIKGEAESNPEFKHSVKELKKK 76 (474)
Q Consensus 42 ~~r~~~~f~~f~~~ik~E~~kn~E~qe~ik~l~e~ 76 (474)
++|..+-..-=+++|++.++.|++|++.|.+|+.+
T Consensus 70 g~rdHsTV~~a~kki~~~~~~D~~l~~~v~~i~~k 104 (110)
T d1l8qa1 70 KRKDHTTVIHAIRSVEEEKKKDRKFKHLVGFLEKQ 104 (110)
T ss_dssp SCCCSTHHHHHHHHHHHTTC--CCHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 55777888888999999999999999999999866
Done!