BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011973
(474 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4HVY0|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER1 PE=1 SV=1
Length = 625
Score = 593 bits (1530), Expect = e-169, Method: Compositional matrix adjust.
Identities = 288/465 (61%), Positives = 369/465 (79%), Gaps = 18/465 (3%)
Query: 9 AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
+VIHPFAEHI YF+LFAIPL+TT++ K ASI SF GYIIY+DFMNNMGHCNFE IP LF
Sbjct: 173 SVIHPFAEHIAYFILFAIPLLTTLLTKTASIISFAGYIIYIDFMNNMGHCNFELIPKRLF 232
Query: 69 TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
+FPPLKFL YTPSYHSLHHTQFRTNYSLFMP+YDYIYGT+D S+D++YEK+L+R
Sbjct: 233 HLFPPLKFLCYTPSYHSLHHTQFRTNYSLFMPLYDYIYGTMDESTDTLYEKTLERGD--- 289
Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
D VDVVHLTHLTTPESIYHLRIG AS AS P Y +W+++LLWPFT S S++
Sbjct: 290 ----DIVDVVHLTHLTTPESIYHLRIGLASFASYPFAY-----RWFMRLLWPFT-SLSMI 339
Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
+ Y R FV+E N+ +KL LQ+WV+PRY +QY L WR+EAIN++IE+AILEAD KGVKV
Sbjct: 340 FTLFYARLFVAERNSFNKLNLQSWVIPRYNLQYLLKWRKEAINNMIEKAILEADKKGVKV 399
Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
+SLGL+NQGEELNRNGE+Y+ P+ +K+++VDGS LAAAVV+NS+PK T V++ G +T
Sbjct: 400 LSLGLMNQGEELNRNGEVYIHNHPD-MKVRLVDGSRLAAAVVINSVPKATTSVVMTGNLT 458
Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
KVA +AS+LCQ G++V+T+ D+YEK++ +P E + +LV TS A K+WLVG+
Sbjct: 459 --KVAYTIASALCQRGVQVSTLRLDEYEKIRSCVPQECRDHLVYLTSEALSSNKVWLVGE 516
Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
T +EQ +A KGT+FIP++Q P ++LR+DC YH+TPA+I+P SL N+HSCENWL R+ M
Sbjct: 517 GTTREEQEKATKGTLFIPFSQFPLKQLRRDCIYHTTPALIVPKSLVNVHSCENWLPRKAM 576
Query: 429 SAWRIAGIIHALEGWDLNECGQT--MCDIHQVWHASLRHGFRPLF 471
SA R+AGI+HALEGW+++ECG + + D+ QVW A L HGF+PL
Sbjct: 577 SATRVAGILHALEGWEMHECGTSLLLSDLDQVWEACLSHGFQPLL 621
>sp|F4HVX7|CERL1_ARATH Protein CER1-like 1 OS=Arabidopsis thaliana GN=At1g02190 PE=2 SV=1
Length = 627
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/469 (56%), Positives = 340/469 (72%), Gaps = 22/469 (4%)
Query: 9 AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
+V+HPFAEHI Y LLFAIP+VT + SI S +GYI Y+DFMNNMGHCNFE P LF
Sbjct: 173 SVVHPFAEHIAYTLLFAIPMVTASLCGILSIVSIMGYITYIDFMNNMGHCNFELFPKRLF 232
Query: 69 TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
+FPPLKFL YTPS+HSLHHTQFRTNYSLFMPIYD+IYGT D +DS+YE+SL E E
Sbjct: 233 HLFPPLKFLCYTPSFHSLHHTQFRTNYSLFMPIYDFIYGTTDNLTDSLYERSL----EIE 288
Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQ-LLWPFTASCS- 186
EES DV+HLTHLTT SIY +R+GF SL+S P ++ WYL +WPFT CS
Sbjct: 289 EESP---DVIHLTHLTTHNSIYQMRLGFPSLSSCP---LWSRPPWYLTCFMWPFTLLCSF 342
Query: 187 VLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 246
L S I RTFV E N L L + + ++P++ Y E+IN++IEEAILEAD KGV
Sbjct: 343 ALTSAIPLRTFVFERNRLRDLTVHSHLLPKFSFHYKSQRHHESINTIIEEAILEADEKGV 402
Query: 247 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGT 306
KV+SLGL+N EELN +GE+Y+++ P KLKI++VDGSS+AA VV+N++PK ++ RG
Sbjct: 403 KVMSLGLMNNREELNGSGEMYVQKYP-KLKIRLVDGSSMAATVVINNIPKEATEIVFRGN 461
Query: 307 VTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLV 366
+T KVA+AV +LCQ G+KV + ++++ KL I NLVLSTS + + K+WLV
Sbjct: 462 LT--KVASAVVFALCQKGVKVVVLREEEHSKL---IKSGVDKNLVLSTSNSYYSPKVWLV 516
Query: 367 GDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR 426
GD + +EQ +A +GT+F+P++ PP KLRKDCFY STPAM +P S N+ SCENWLGRR
Sbjct: 517 GDGIENEEQMKAKEGTLFVPFSHFPPNKLRKDCFYQSTPAMRVPKSAQNIDSCENWLGRR 576
Query: 427 VMSAWRIAGIIHALEGWDLNECGQTMCDI---HQVWHASLRHGFRPLFP 472
VMSAW+I GI+HALEGW+ ++CG T C++ H +W A+LRH F+PL P
Sbjct: 577 VMSAWKIGGIVHALEGWEEHDCGNT-CNVLRLHAIWEAALRHDFQPLPP 624
>sp|F4IR05|CERL2_ARATH Protein CER1-like 2 OS=Arabidopsis thaliana GN=At2g37700 PE=2 SV=1
Length = 613
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/466 (54%), Positives = 324/466 (69%), Gaps = 30/466 (6%)
Query: 9 AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
+V+HPFAEHI Y L+ +PL+TT + S+ S Y+ Y+DFMNNMGHCNFE IP +LF
Sbjct: 169 SVVHPFAEHIGYTLILGLPLITTFMCGTVSVVSIALYLTYIDFMNNMGHCNFELIPKFLF 228
Query: 69 TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
++ PPLKFL YTPS+HSLHHTQFRTNYSLFMP+YDYIYGT D SDS+YE SL E+E
Sbjct: 229 SLLPPLKFLCYTPSFHSLHHTQFRTNYSLFMPMYDYIYGTTDECSDSLYETSL----EKE 284
Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
EE D +HLTHLT+ +SIYHLR+GFASL+S P S+ YL L+ PF S +
Sbjct: 285 EEKP---DAIHLTHLTSLDSIYHLRLGFASLSSHPLS-----SRCYLFLMKPFALILSFI 336
Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
+ +TFV E N L L + ++P++ Y ++E IN +IE AILEAD KGVKV
Sbjct: 337 LRSFSFQTFVVERNRFRDLTLHSHLLPKFSSHYMSHQQKECINKMIEAAILEADKKGVKV 396
Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
+SLGLLNQGEELN GE+Y+ R P KLKI++VDG SLAA VV++S+P T VL RG +T
Sbjct: 397 MSLGLLNQGEELNGYGEMYVRRHP-KLKIRIVDGGSLAAEVVLHSIPVGTKEVLFRGQIT 455
Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
KVA A+ SLCQ IKV + K+++ L + + + NL IWLVGD
Sbjct: 456 --KVARAIVFSLCQNAIKVMVLRKEEHSMLAEFLDDKCKENL------------IWLVGD 501
Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
L+ KEQ A GT+F+P++Q PP+ LRKDCFYH+TPAMIIP S N+ SCENWLGRRVM
Sbjct: 502 GLSTKEQKMAKDGTLFLPFSQFPPKTLRKDCFYHTTPAMIIPHSAQNIDSCENWLGRRVM 561
Query: 429 SAWRIAGIIHALEGWDLNECG---QTMCDIHQVWHASLRHGFRPLF 471
SAWR+ GI+HALEGW +ECG ++ + +VW A+LR+GF+PL
Sbjct: 562 SAWRVGGIVHALEGWKEHECGLDDNSIINPPRVWEAALRNGFQPLL 607
>sp|Q8H1Z0|CER3_ARATH Protein ECERIFERUM 3 OS=Arabidopsis thaliana GN=CER3 PE=1 SV=1
Length = 632
Score = 295 bits (755), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 256/456 (56%), Gaps = 17/456 (3%)
Query: 16 EHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 75
E+I+ ++ +PL+ + S+++ GY + DFM +GHCN E LF + P L+
Sbjct: 182 ENIILCVVAGVPLIGCCLFGVGSLSAIYGYAVMFDFMRCLGHCNVEIFSHKLFEILPVLR 241
Query: 76 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDV 135
+L+YTP+YHSLHH + TN+ LFMP++D + T + +S + +K +GE +
Sbjct: 242 YLIYTPTYHSLHHQEMGTNFCLFMPLFDVLGDTQNPNSWELQKKIRLSAGERKRVP---- 297
Query: 136 DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGR 195
+ V L H S H F S AS P+ ++ +L +WPFT C +L W + +
Sbjct: 298 EFVFLAHGVDVMSAMHAPFVFRSFASMPYT-----TRIFLLPMWPFTF-CVMLGMWAWSK 351
Query: 196 TFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLN 255
TF+ TL QTW VPR+ QY LP+ + IN IE AIL AD GVKVISL LN
Sbjct: 352 TFLFSFYTLRNNLCQTWGVPRFGFQYFLPFATKGINDQIEAAILRADKIGVKVISLAALN 411
Query: 256 QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 315
+ E LN G +++ + P+ L+++VV G++L AAV++ +PK V L G + K+ A
Sbjct: 412 KNEALNGGGTLFVNKHPD-LRVRVVHGNTLTAAVILYEIPKDVNEVFLTGATS--KLGRA 468
Query: 316 VASSLCQMGIKV--ATICKDDYEKLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGDDLTG 372
+A LC+ G++V T+ + ++K++ PVE Q+NLV T Y AA K W+VG LT
Sbjct: 469 IALYLCRRGVRVLMLTLSMERFQKIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGKWLTP 528
Query: 373 KEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWR 432
+EQ+ AP GT F + P K R++C Y AM +P + + +CE + R V+ A
Sbjct: 529 REQSWAPAGTHFHQFVVPPILKFRRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVVHACH 588
Query: 433 IAGIIHALEGWDLNECGQTMCD-IHQVWHASLRHGF 467
G++H LEGW +E G D I VW A++++G
Sbjct: 589 AGGVVHMLEGWKHHEVGAIDVDRIDLVWEAAMKYGL 624
>sp|Q8J207|ERG3_LEPMC C-5 sterol desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1
Length = 356
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 84 HSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVV 138
H++HH F NY F ++D + G+ + +D ++++ LK +E + A VD++
Sbjct: 280 HTMHHLYFNYNYGQFTTLWDRLGGSYRKPNDELFKRELKMCQDEWNKQAKAVDMM 334
>sp|P32353|ERG3_YEAST C-5 sterol desaturase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ERG3 PE=1 SV=1
Length = 365
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 84 HSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVD 136
H++HH F NY F ++D + G+ R DS+++ L+ + E + +V+
Sbjct: 288 HTVHHLYFNYNYGQFTTLWDRLGGSYRRPDDSLFDPKLRDAKETWDAQVKEVE 340
>sp|Q6ZNB7|ALKMO_HUMAN Alkylglycerol monooxygenase OS=Homo sapiens GN=AGMO PE=1 SV=1
Length = 445
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 20/76 (26%)
Query: 45 YIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFR----TNYSLFMP 100
+ I+ + +NN+G PL+ ++ TPS+H +HH + R NY+ +
Sbjct: 198 FWIHTEVINNLG----------------PLELILNTPSHHRVHHGRNRYCIDKNYAGVLI 241
Query: 101 IYDYIYGTIDRSSDSV 116
I+D I+GT + ++ V
Sbjct: 242 IWDKIFGTFEAENEKV 257
>sp|P50860|ERG3_CANGA C-5 sterol desaturase OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERG3 PE=3
SV=1
Length = 364
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 84 HSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESA 132
H++HH F NY F ++D + G+ R DS+++ LK + E+ A
Sbjct: 289 HTVHHLYFNYNYGQFTTLWDRLGGSYRRPEDSLFDPKLKMDKKVLEKQA 337
>sp|A0JPQ8|ALKMO_RAT Alkylglycerol monooxygenase OS=Rattus norvegicus GN=Agmo PE=2 SV=1
Length = 447
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 73 PLKFLMYTPSYHSLHHTQFR----TNYSLFMPIYDYIYGTIDRSSDSV 116
PL+ ++ TPS+H +HH + R NY+ + I+D I+GT + ++ V
Sbjct: 210 PLELVLNTPSHHRVHHGRNRYCIDKNYAGTLIIWDRIFGTFEAENEQV 257
>sp|Q6NYE4|ALKMO_DANRE Alkylglycerol monooxygenase OS=Danio rerio GN=agmo PE=2 SV=1
Length = 446
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 73 PLKFLMYTPSYHSLHHTQ----FRTNYSLFMPIYDYIYGTIDRSSDSV 116
PL+ ++ TPS+H +HH + NY+ + I+D ++GT SD V
Sbjct: 209 PLELILNTPSHHRVHHGRNPYCIDKNYAGILIIWDRMFGTFAPESDKV 256
>sp|Q8BS35|ALKMO_MOUSE Alkylglycerol monooxygenase OS=Mus musculus GN=Agmo PE=2 SV=1
Length = 447
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 73 PLKFLMYTPSYHSLHHTQFR----TNYSLFMPIYDYIYGTIDRSSDSV 116
PL+ ++ TPS+H +HH + R NY+ + I+D I+GT + ++ V
Sbjct: 210 PLEVILNTPSHHRVHHGRNRYCIDKNYAGTLIIWDRIFGTFEAENEQV 257
>sp|Q754B9|ERG3_ASHGO C-5 sterol desaturase OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=ERG3 PE=3 SV=2
Length = 351
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 84 HSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVD 136
H++HH F NY F ++D + G+ +++ +LK+ E+ +VD
Sbjct: 282 HTVHHLYFNYNYGQFTTLWDRLGGSYREPDHELFDSNLKKDKAVWEQQIKEVD 334
>sp|O93875|ERG3_CANAX C-5 sterol desaturase OS=Candida albicans GN=ERG3 PE=3 SV=1
Length = 386
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 84 HSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEE 130
H++HH F NY F ++D + + R DS++ K +K EEE++
Sbjct: 314 HTVHHLYFNYNYGQFTTLWDRLGNSYRRPDDSLFVKDVK--AEEEKK 358
>sp|Q3LZX9|VME1_BCHK3 Membrane protein OS=Bat coronavirus HKU3 GN=M PE=3 SV=1
Length = 221
Score = 32.3 bits (72), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 150 YHLRIGFASLA---------SKPHRYTYTLSQWYLQLLWPFTASCSVL-----VSWIYG 194
++L IGF LA S +R+ Y + +L LLWP T +C VL ++W+ G
Sbjct: 19 WNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTG 77
>sp|Q0Q472|VME1_BC279 Membrane protein OS=Bat coronavirus 279/2005 GN=M PE=3 SV=1
Length = 221
Score = 32.3 bits (72), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 150 YHLRIGFASLA---------SKPHRYTYTLSQWYLQLLWPFTASCSVL-----VSWIYG 194
++L IGF LA S +R+ Y + +L LLWP T +C VL ++W+ G
Sbjct: 19 WNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTG 77
>sp|P59596|VME1_CVHSA Membrane protein OS=Human SARS coronavirus GN=M PE=1 SV=1
Length = 221
Score = 32.3 bits (72), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 150 YHLRIGFASLA---------SKPHRYTYTLSQWYLQLLWPFTASCSVL-----VSWIYG 194
++L IGF LA S +R+ Y + +L LLWP T +C VL ++W+ G
Sbjct: 19 WNLVIGFLFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTG 77
>sp|Q3I5J2|VME1_BCRP3 Membrane protein OS=Bat coronavirus Rp3/2004 GN=M PE=3 SV=1
Length = 221
Score = 32.3 bits (72), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 14/59 (23%)
Query: 150 YHLRIGFASLA---------SKPHRYTYTLSQWYLQLLWPFTASCSVL-----VSWIYG 194
++L IGF LA S +R+ Y + +L LLWP T +C VL ++W+ G
Sbjct: 19 WNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTG 77
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 179,502,654
Number of Sequences: 539616
Number of extensions: 7384725
Number of successful extensions: 19220
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 19175
Number of HSP's gapped (non-prelim): 33
length of query: 474
length of database: 191,569,459
effective HSP length: 121
effective length of query: 353
effective length of database: 126,275,923
effective search space: 44575400819
effective search space used: 44575400819
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)